RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYNE2 (Homo sapiens)

Ensembl gene IDs: ENSG00000054654

Ensembl transcript IDs: ENST00000341472.9, ENST00000344113.8, ENST00000357395.7, ENST00000358025.7, ENST00000394768.6, ENST00000441438.2, ENST00000458046.6, ENST00000553289.5, ENST00000553308.1, ENST00000553455.1, ENST00000553801.1, ENST00000554584.5, ENST00000554805.6, ENST00000554928.1, ENST00000554997.1, ENST00000555002.6, ENST00000555241.5, ENST00000555323.1, ENST00000555612.5, ENST00000556342.1, ENST00000556725.1, ENST00000557005.1, ENST00000557024.1, ENST00000557060.1, ENST00000557307.1, ENST00000673797.1, ENST00000673869.1, ENST00000674003.1, ENST00000674144.1

Found 4018 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGGCAGCAGGCAGGCCAGGAGCAGCAGCAGCAGGAGGAGCAGCTaGAGGGGTAGGGCTGCCCGGACCACCCTTGAGAGGAAGGAGCGC +
Preference number: 1 (lower is better)
Translates to: EGSRQARSSSSRRSS*RGRAARTTLERKER
Trigger: GCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAGCCCTACCCCTGCAGCTGCTCCTCCTGCTGCTGCTGCTCCTGGCCTGCCTGCTGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR GCA 90 bp TCTCACTGCTCTGAACTGCTTTGCTCGGGGAGCTGGCACGGATGTTaGAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAG +
Preference number: 1 (lower is better)
Translates to: SHCSELLCSGSWHGC*RRLVPRVYLVEAGQ
Trigger: CTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 90 bp TCTGCCAAAATACCCGGGGCACCTGCCACACAGGTTCCCTGCTCCTaGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGCC +
Preference number: 1 (lower is better)
Translates to: SAKIPGAPATQVPCS*GGTQSESCPGLQGA
Trigger: GGCTCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAACCTGTGTGGCAGGTGCCCCGGGTATTTTGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR TCA 90 bp CGACACTCTAGGAGAGCCCGGGGGTCTGCCTTTGGATCGGTGACATaGGCCTTCTGCCTCCGGTTCTTGGCACTCGCTAACCACAGCAGC +
Preference number: 1 (lower is better)
Translates to: RHSRRARGSAFGSVT*AFCLRFLALANHSS
Trigger: GCTGCTGTGGTTAGCGAGTGCCAAGAACCGGAGGCAGAAGGCTCATGTCACCGATCCAAAGGCAGACCCCCGGGCTCTCCTAGAGTGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR TCA 90 bp CCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGCCTTTGGATCGGTaGCATGAGCCTTCTGCCTCCGGTTCTTGGCACTCGCTAACCACA +
Preference number: 1 (lower is better)
Translates to: PSDTLGEPGGLPLDR*HEPSASGSWHSLTT
Trigger: TGTGGTTAGCGAGTGCCAAGAACCGGAGGCAGAAGGCTCATGTCACCGATCCAAAGGCAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR GCA 90 bp CCCTGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTaGACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGG +
Preference number: 1 (lower is better)
Translates to: PWAPGSPCWVSPEEV*TGPGTLPTLSHSDW
Trigger: CCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CCA 90 bp GTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTaGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTG +
Preference number: 1 (lower is better)
Translates to: VCTGPGTLPTLSHSD*SGATCWAPLAIRQV
Trigger: CACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTaGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTA +
Preference number: 1 (lower is better)
Translates to: HRSRDLANTKSLRLV*GHVLGTLGNQAGGV
Trigger: TACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CCA 90 bp CTTCCCAGAGCAGGCTCAGCTGGCGGAGTCTACTTTGGAGCTCTGTaGATTCGGGGCTCTCGGTTTGCAGAAATTCCTTGCTGCTCACGT +
Preference number: 1 (lower is better)
Translates to: LPRAGSAGGVYFGAL*IRGSRFAEIPCCSR
Trigger: ACGTGAGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAGCTGAGCCTGCTCTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 90 bp AGGGCTTTTAAGAGGGATTCAGTCATCCCGATCTGGGTCTTGGCTTaGTCGAGATCCTCCCTTAGCTCAGCAGTGCTGCCACTGAGTGCA +
Preference number: 1 (lower is better)
Translates to: RAFKRDSVIPIWVLA*SRSSLSSAVLPLSA
Trigger: TGCACTCAGTGGCAGCACTGCTGAGCTAAGGGAGGATCTCGACCAAGCCAAGACCCAGATCGGGATGACTGAATCCCTCTTAAAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 90 bp TGGCGGAGTCTACTTTGGAGCTCTGTGGATTCGGGGCTCTCGGTTTaGAGAAATTCCTTGCTGCTCACGTTGACAGAGACCACTAATGCC +
Preference number: 1 (lower is better)
Translates to: WRSLLWSSVDSGLSV*RNSLLLTLTETTNA
Trigger: GGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 90 bp CATGAATCTGCCGCTGAAAGGCCTCAAACCTCTTCAGTTCCTCTTTaGCACTCGTGTACAACACCTCTGAGGAATTTGGGCAGGCTGCCG +
Preference number: 1 (lower is better)
Translates to: HESAAERPQTSSVPL*HSCTTPLRNLGRLP
Trigger: CGGCAGCCTGCCCAAATTCCTCAGAGGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGAGGTTTGAGGCCTTTCAGCGGCAGATTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 90 bp TCAGAAGGAGACAGGGCTTTTAAGAGGGATTCAGTCATCCCGATCTaGGTCTTGGCTTGGTCGAGATCCTCCCTTAGCTCAGCAGTGCTG +
Preference number: 1 (lower is better)
Translates to: SEGDRAFKRDSVIPI*VLAWSRSSLSSAVL
Trigger: CAGCACTGCTGAGCTAAGGGAGGATCTCGACCAAGCCAAGACCCAGATCGGGATGACTGAATCCCTCTTAAAAGCCCTGTCTCCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 90 bp ACACCTCTGAGGAATTTGGGCAGGCTGCCGTCCTCTCAGCTGACTTaGGCCAGTCCTCAAAGCGAGAATAGTCGTCTAAAAACTTCTGCC +
Preference number: 1 (lower is better)
Translates to: TPLRNLGRLPSSQLT*ASPQSENSRLKTSA
Trigger: GGCAGAAGTTTTTAGACGACTATTCTCGCTTTGAGGACTGGCTCAAGTCAGCTGAGAGGACGGCAGCCTGCCCAAATTCCTCAGAGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 90 bp GATGACGGTTCCTCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTaGATTTCTCTGGGGTCTTCCATGTCTGTTTCATTCTCAGAGGCC +
Preference number: 1 (lower is better)
Translates to: DDGSSLSPRLRQESV*ISLGSSMSVSFSEA
Trigger: GGCCTCTGAGAATGAAACAGACATGGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCGAGGAACCGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 90 bp CCATGCTTGGTAGCCTGGAGGTCAGTGGTCAAGGCAATCATGCTTTaGTTCCCTGCCCGTTCTTCTGGAGACTTCAGCCTTAACTGTAGA +
Preference number: 1 (lower is better)
Translates to: PCLVAWRSVVKAIML*FPARSSGDFSLNCR
Trigger: TCTACAGTTAAGGCTGAAGTCTCCAGAAGAACGGGCAGGGAACCAAAGCATGATTGCCTTGACCACTGACCTCCAGGCTACCAAGCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 90 bp TCTTGGCTTGGTCGAGATCCTCCCTTAGCTCAGCAGTGCTGCCACTaGGTGCATGGCAGTTGGATTCTCCTGTTAAGCACTTCTGTACAT +
Preference number: 1 (lower is better)
Translates to: SWLGRDPPLAQQCCH*VHGSWILLLSTSVH
Trigger: ATGTACAGAAGTGCTTAACAGGAGAATCCAACTGCCATGCACTCAGTGGCAGCACTGCTGAGCTAAGGGAGGATCTCGACCAAGCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 90 bp TTCGAATTCCTGACCCACGAGCCAACTGATAAGCTCCTTCACATGTaGTTTGGGCAGATGCTTCTTCACATGCTTCAGTACGCTGTCCAC +
Preference number: 1 (lower is better)
Translates to: FEFLTHEPTDKLLHM*FGQMLLHMLQYAVH
Trigger: GTGGACAGCGTACTGAAGCATGTGAAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTTATCAGTTGGCTCGTGGGTCAGGAATTCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 90 bp CCTCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTaGGGTCTTCCATGTCTGTTTCATTCTCAGAGGCCTCCTTTTCAT +
Preference number: 1 (lower is better)
Translates to: PRSLPVYAKNQSGFL*GLPCLFHSQRPPFH
Trigger: ATGAAAAGGAGGCCTCTGAGAATGAAACAGACATGGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR TCA 90 bp TTTATTTCCCAGTCTTCCTCCAACTTTTCCACTGCAGCTGATTCCTaGGTAGACTCCTGCACATCAGAAGTGGCCTGCTTCTCTCTGCCT +
Preference number: 1 (lower is better)
Translates to: FISQSSSNFSTAADS*VDSCTSEVACFSLP
Trigger: AGGCAGAGAGAAGCAGGCCACTTCTGATGTGCAGGAGTCTACTCAGGAATCAGCTGCAGTGGAAAAGTTGGAGGAAGACTGGGAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 90 bp GGGGCTGGATATCATTCCCAGTTTCTCAGTGAGGTCCTGGATGTGTaGTACTGTGGATTCCAATTCCTCTTGTTTTCGAAGAGGCATCTC +
Preference number: 1 (lower is better)
Translates to: GAGYHSQFLSEVLDV*YCGFQFLLFSKRHL
Trigger: GAGATGCCTCTTCGAAAACAAGAGGAATTGGAATCCACAGTAGCACACATCCAGGACCTCACTGAGAAACTGGGAATGATATCCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 90 bp AGGGGTGAGGCTGGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTaGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACA +
Preference number: 1 (lower is better)
Translates to: RGEAGFWVPCKAIKS*DTCSRNCLSFFSIT
Trigger: TGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCCAGCCTCACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR TCA 90 bp ACAGCCCCTGAGCTTTCAGGAACATTCTGGATACTTCTGATGCGCTaGAGAAGTAGAGTCAGTAACAGCTGTTGCTTCTCCACGTTCTCT +
Preference number: 1 (lower is better)
Translates to: TAPELSGTFWILLMR*RSRVSNSCCFSTFS
Trigger: AGAGAACGTGGAGAAGCAACAGCTGTTACTGACTCTACTTCTTCAGCGCATCAGAAGTATCCAGAATGTTCCTGAAAGCTCAGGGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 90 bp CAGTTTCCACAGCCCCTGAGCTTTCAGGAACATTCTGGATACTTCTaGTGCGCTGAAGAAGTAGAGTCAGTAACAGCTGTTGCTTCTCCA +
Preference number: 1 (lower is better)
Translates to: QFPQPLSFQEHSGYF*CAEEVESVTAVASP
Trigger: TGGAGAAGCAACAGCTGTTACTGACTCTACTTCTTCAGCGCATCAGAAGTATCCAGAATGTTCCTGAAAGCTCAGGGGCTGTGGAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 90 bp CCCACGAGCCAACTGATAAGCTCCTTCACATGTGCTTTGGGCAGATaGTTCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTA +
Preference number: 1 (lower is better)
Translates to: PTSQLISSFTCALGR*FFTCFSTLSTCFIL
Trigger: TAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTTATCAGTTGGCTCGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 90 bp GCCCGTTCTTCTGGAGACTTCAGCCTTAACTGTAGATGTTGCTGCTaGTGTTGCAGAGAAATCTCAGTGTCCTGTACCTTATTCATGAGG +
Preference number: 1 (lower is better)
Translates to: ARSSGDFSLNCRCCC*CCREISVSCTLFMR
Trigger: CCTCATGAATAAGGTACAGGACACTGAGATTTCTCTGCAACAGCAGCAGCAACATCTACAGTTAAGGCTGAAGTCTCCAGAAGAACGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 90 bp CCTGCCCGTTCTTCTGGAGACTTCAGCCTTAACTGTAGATGTTGCTaGTGCTGTTGCAGAGAAATCTCAGTGTCCTGTACCTTATTCATG +
Preference number: 1 (lower is better)
Translates to: PARSSGDFSLNCRCC*CCCREISVSCTLFM
Trigger: CATGAATAAGGTACAGGACACTGAGATTTCTCTGCAACAGCAGCAGCAACATCTACAGTTAAGGCTGAAGTCTCCAGAAGAACGGGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 90 bp TTCCCTGCCCGTTCTTCTGGAGACTTCAGCCTTAACTGTAGATGTTaGTGCTGCTGTTGCAGAGAAATCTCAGTGTCCTGTACCTTATTC +
Preference number: 1 (lower is better)
Translates to: FPARSSGDFSLNCRC*CCCCREISVSCTLF
Trigger: GAATAAGGTACAGGACACTGAGATTTCTCTGCAACAGCAGCAGCAACATCTACAGTTAAGGCTGAAGTCTCCAGAAGAACGGGCAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 90 bp TTGGCTTCGGGGCTGGATATCATTCCCAGTTTCTCAGTGAGGTCCTaGATGTGTGCTACTGTGGATTCCAATTCCTCTTGTTTTCGAAGA +
Preference number: 1 (lower is better)
Translates to: LASGLDIIPSFSVRS*MCATVDSNSSCFRR
Trigger: TCTTCGAAAACAAGAGGAATTGGAATCCACAGTAGCACACATCCAGGACCTCACTGAGAAACTGGGAATGATATCCAGCCCCGAAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 90 bp AGTAGAGTCAGTAACAGCTGTTGCTTCTCCACGTTCTCTCCATATTaGCATAAACAGTCTAGCAGCTCAGAGAGTTCCTCTGTGGTGGCT +
Preference number: 1 (lower is better)
Translates to: SRVSNSCCFSTFSPY*HKQSSSSESSSVVA
Trigger: AGCCACCACAGAGGAACTCTCTGAGCTGCTAGACTGTTTATGCCAATATGGAGAGAACGTGGAGAAGCAACAGCTGTTACTGACTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 90 bp GCTGGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTaGTCCCGTAACTGTTTGAGTTTCTTCTCAATAACATGCACCTTT +
Preference number: 1 (lower is better)
Translates to: AGFWVPCKAIKSWDT*SRNCLSFFSITCTF
Trigger: AAAGGTGCATGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR GCA 90 bp GGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACAGACTGCTaGCTAGCTAGAATGCCATCATGTGTCACTTTGCACTTTCTGATC +
Preference number: 1 (lower is better)
Translates to: GTLSLTSSANDSTDC*LARMPSCVTLHFLI
Trigger: GATCAGAAAGTGCAAAGTGACACATGATGGCATTCTAGCTAGGCAGCAGTCTGTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 90 bp CTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACAGACTaGTGCCTAGCTAGAATGCCATCATGTGTCACTTTGCACTTTCTG +
Preference number: 1 (lower is better)
Translates to: LGTLSLTSSANDSTD*CLARMPSCVTLHFL
Trigger: CAGAAAGTGCAAAGTGACACATGATGGCATTCTAGCTAGGCAGCAGTCTGTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 90 bp GTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTaGTATTTTCTATCCAAGCCTCAGTGCTCTTCAGAAGGTCACTAT +
Preference number: 1 (lower is better)
Translates to: VSSKSHSQQDWPAND*YFLSKPQCSSEGHY
Trigger: ATAGTGACCTTCTGAAGAGCACTGAGGCTTGGATAGAAAATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 90 bp AATCTTGGATATTCCTTAGGTGTTGATAGATGCGATCAGCATCAATaGGATGAAATCCCTGGATGGCCATTTTATGGAGAGGCAGGTCCG +
Preference number: 1 (lower is better)
Translates to: NLGYSLGVDRCDQHQ*DEIPGWPFYGEAGP
Trigger: CGGACCTGCCTCTCCATAAAATGGCCATCCAGGGATTTCATCTCATTGATGCTGATCGCATCTATCAACACCTAAGGAATATCCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 90 bp CTGATAAGCTCCTTCACATGTGCTTTGGGCAGATGCTTCTTCACATaGTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCT +
Preference number: 1 (lower is better)
Translates to: LISSFTCALGRCFFT*FSTLSTCFILLFLP
Trigger: AGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 90 bp TCTTCTGGAGACTTCAGCCTTAACTGTAGATGTTGCTGCTGCTGTTaGAGAGAAATCTCAGTGTCCTGTACCTTATTCATGAGGGTTGTA +
Preference number: 1 (lower is better)
Translates to: SSGDFSLNCRCCCCC*REISVSCTLFMRVV
Trigger: TACAACCCTCATGAATAAGGTACAGGACACTGAGATTTCTCTGCAACAGCAGCAGCAACATCTACAGTTAAGGCTGAAGTCTCCAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 90 bp GCTTTCAGTATCTCCTGCAGTCTCTTCACTCTCAGTTCTATTTCCTaGATATCAGAGGGAGGCTTTGCCATCTTTAACATTTCCAGCTCT +
Preference number: 1 (lower is better)
Translates to: AFSISCSLFTLSSIS*ISEGGFAIFNISSS
Trigger: AGAGCTGGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAGAGTGAAGAGACTGCAGGAGATACTGAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 90 bp CATATTGGCATAAACAGTCTAGCAGCTCAGAGAGTTCCTCTGTGGTaGCTGCCTCTTTTGTTTTGGAAATTTCAGGGAGTTCTTCCTGAA +
Preference number: 1 (lower is better)
Translates to: HIGINSLAAQRVPLW*LPLLFWKFQGVLPE
Trigger: TTCAGGAAGAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCTGAGCTGCTAGACTGTTTATGCCAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 90 bp GAAATTGTCCAATGTAGTATTCAGGTCTGTGACGCAAACCTGGTATaGATCATGTTCTCGAACGTGACCGTCCAAGTTTTGCACAGAATC +
Preference number: 1 (lower is better)
Translates to: EIVQCSIQVCDANLV*IMFSNVTVQVLHRI
Trigger: GATTCTGTGCAAAACTTGGACGGTCACGTTCGAGAACATGATTCATACCAGGTTTGCGTCACAGACCTGAATACTACATTGGACAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 90 bp TGGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACATaGACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTA +
Preference number: 1 (lower is better)
Translates to: WDTCSRNCLSFFSIT*TFSSASIQSSPCPL
Trigger: TAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCATGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR TCA 90 bp ATAAACACTTGGCTTTCTCAATTCTCTGACTTAAAATTTGGGCATTaGGCCGTCTGCTTTCCGGAGAGCTATCAGGAGCTTTTAGTACTA +
Preference number: 1 (lower is better)
Translates to: INTWLSQFSDLKFGH*AVCFPESYQELLVL
Trigger: TAGTACTAAAAGCTCCTGATAGCTCTCCGGAAAGCAGACGGCTCAATGCCCAAATTTTAAGTCAGAGAATTGAGAAAGCCAAGTGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 90 bp TCCTTCATTGCTGAGTTCTTAGAAACTAGTTCCTGTAAAGTATACTaGAGTTGTAGTTTGGCTTCGGGGCTGGATATCATTCCCAGTTTC +
Preference number: 1 (lower is better)
Translates to: SFIAEFLETSSCKVY*SCSLASGLDIIPSF
Trigger: GAAACTGGGAATGATATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTTCTAAGAACTCAGCAATGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 90 bp TTTCTTCAAAGTAATAAGTGCCTGAAGCAAATTGTCCAAATGCTGTaGCGAATATCCTATATTGTGGAGAACCAAGGCCCCAGTTTCTGT +
Preference number: 1 (lower is better)
Translates to: FLQSNKCLKQIVQML*RISYIVENQGPSFC
Trigger: ACAGAAACTGGGGCCTTGGTTCTCCACAATATAGGATATTCGGCACAGCATTTGGACAATTTGCTTCAGGCACTTATTACTTTGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 90 bp ATCTTCTCATCTATGTCTTCTAAAGCTTTTCTGCATTCTTCCACCTaGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATAC +
Preference number: 1 (lower is better)
Translates to: IFSSMSSKAFLHSST*DSISAGTMVYISEY
Trigger: GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGAATGCAGAAAAGCTTTAGAAGACATAGATGAGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 90 bp TCTTCTTCTTCAGTAAACCCATATTCCTTCAAAGAGTTGTTCAATTaGGCCACAGATTCAAACTGTTCCCTCTTTCTAGCTAAAGCTTGG +
Preference number: 1 (lower is better)
Translates to: SSSSVNPYSFKELFN*ATDSNCSLFLAKAW
Trigger: CCAAGCTTTAGCTAGAAAGAGGGAACAGTTTGAATCTGTGGCCCAATTGAACAACTCTTTGAAGGAATATGGGTTTACTGAAGAAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 90 bp TTCTCTAGTTCCTGCAGTTTCTGCAATTTTTCCTCAACCGCTATTTaGTCCACAGGCTTATCAGAAAAACTGACAAATTCCTTGGAGAAA +
Preference number: 1 (lower is better)
Translates to: FSSSCSFCNFSSTAI*STGLSEKLTNSLEK
Trigger: TTTCTCCAAGGAATTTGTCAGTTTTTCTGATAAGCCTGTGGATCAAATAGCGGTTGAGGAAAAATTGCAGAAACTGCAGGAACTAGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 90 bp GCATTGCGTGTAGATCAAATGGGTGTAACTCCTTTAATACAAAGTTaGCTGGCTCTTCTAAGCGGTTACATATTTCAATCTGTTTTGCTA +
Preference number: 1 (lower is better)
Translates to: ALRVDQMGVTPLIQS*LALLSGYIFQSVLL
Trigger: TAGCAAAACAGATTGAAATATGTAACCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGGAGTTACACCCATTTGATCTACACGCAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 90 bp CCAGCTGATTGGAGTAAAACTGATTCTAAGCGTATTAAATATGATTaGTTGTTTCCATCAGCTAAGGGTGCCTATGAGTTTCTGAACCAT +
Preference number: 1 (lower is better)
Translates to: PADWSKTDSKRIKYD*LFPSAKGAYEFLNH
Trigger: ATGGTTCAGAAACTCATAGGCACCCTTAGCTGATGGAAACAATCAATCATATTTAATACGCTTAGAATCAGTTTTACTCCAATCAGCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR TCA 90 bp GTCAACAAGGCTTTCATTGAAGATTCAACTGCAGCAAGGTATTCCTaGAAATCTCTGAGGACACAATATTGGCTTTCTTTGTTTTTCTTC +
Preference number: 1 (lower is better)
Translates to: VNKAFIEDSTAARYS*KSLRTQYWLSLFFF
Trigger: GAAGAAAAACAAAGAAAGCCAATATTGTGTCCTCAGAGATTTTCAGGAATACCTTGCTGCAGTTGAATCTTCAATGAAAGCCTTGTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 90 bp CCTGTTCAACAATGTCCTGAACTTCAGAATCCAGCTCATTTAGTTTaGAATGCCATAGATCTAACTCGTCCCACATTTTCTTTTGAATTT +
Preference number: 1 (lower is better)
Translates to: PVQQCPELQNPAHLV*NAIDLTRPTFSFEF
Trigger: AAATTCAAAAGAAAATGTGGGACGAGTTAGATCTATGGCATTCCAAACTAAATGAGCTGGATTCTGAAGTTCAGGACATTGTTGAACAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 90 bp CATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATaGGCATTAATCTCAGATCCTCCTTACTTTGTAAATATTTCTCTC +
Preference number: 1 (lower is better)
Translates to: HVVEQSLLPVSSLVL*ALISDPPYFVNISL
Trigger: GAGAGAAATATTTACAAAGTAAGGAGGATCTGAGATTAATGCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 90 bp GATGAATTCAAAACCATAAGGGACTCTTTAATCTCTTTTATCCAATaGATTACATCATGTGCAAGATCATTAAAGCTCTGGTCCTCTGTG +
Preference number: 1 (lower is better)
Translates to: DEFKTIRDSLISFIQ*ITSCARSLKLWSSV
Trigger: CACAGAGGACCAGAGCTTTAATGATCTTGCACATGATGTAATTCATTGGATAAAAGAGATTAAAGAGTCCCTTATGGTTTTGAATTCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCGCTGTGACCCGCCTCTaGAGGTTGTCCCAGCGCTGG +
Preference number: 2 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSAVTRL*RLSQRW
Trigger: CCAGCGCTGGGACAACCTTCAGAGGCGGGTCACAGC...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp CCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCCTCACTGCTCTGAACTaGTTTGCTCGGGGAGCTGGC +
Preference number: 2 (lower is better)
Translates to: PGPPLRGRSAVAVCCRGPLTALN*FARGAG
Trigger: GCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAG...GGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp GCAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTTCACTCAGATTGGTCTaGGGCCACGTGCTGGGCACC +
Preference number: 2 (lower is better)
Translates to: AGGWSPESTSSKLGRGEASLRLV*GHVLGT
Trigger: GGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGA...AGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp CCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTCTGCCTCCGGTTCTTaGCACTCGCTAACCACAGCA +
Preference number: 2 (lower is better)
Translates to: PGPPLRGRSAVAVCCRGPSASGS*HSLTTA
Trigger: TGCTGTGGTTAGCGAGTGCCAAGAACCGGAGGCAGA...GGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp CCTTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGCCGGAGTGCAGGAGGTaGGCCGCCGGTGGAACCGGG +
Preference number: 2 (lower is better)
Translates to: PFPVALVPSDTLGEPGGLPECRR*AAGGTG
Trigger: CCCGGTTCCACCGGCGGCTCACCTCCTGCACTCCGG...CAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp TGCTTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTCTCTGACTGCTGCTCTGTaGTACCGGCCAGTCCCCCGT +
Preference number: 2 (lower is better)
Translates to: CFARGAGTDVAGGWSPESLTAAL*YRPVPR
Trigger: ACGGGGGACTGGCCGGTATCACAGAGCAGCAGTCAG...AGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp GCAGGAGGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAAATACCCGGGGCACCTaGCACACAGGTTCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: AGGEPPVEPGDPSKHLLANTRGT*HTGSLL
Trigger: GAGCAGGGAACCTGTGTGGCAGGTGCCCCGGGTATT...TGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp AGCTGCAGGGGTAGGGCTGCCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCTGGCAATCAGGCAGGTaGTGTAGCACTGTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: SCRGRAARTTLERKERCGWQSGR*CSTVAS
Trigger: GCTGGCCACAGTGCTACACCACCTGCCTGATTGCCA...GCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAGCCCTACCCCTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCGTGCTGGGCACCCTTaGCAATCAGGCAGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGRAGHP*QSGRWC
Trigger: ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTCTGGGGCCACGTGCTaGGCACCCTTGGCAATCAGG +
Preference number: 2 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASGATC*APLAIR
Trigger: CCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR GCA 90 bp TGCTTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTCTTGTCCCAGCGCTGGTTaGCCTCGTGGACCATCTGCT +
Preference number: 2 (lower is better)
Translates to: CFARGAGTDVAGGWSPESCPSAG*PRGPSA
Trigger: AGCAGATGGTCCACGAGGGCAACCAGCGCTGGGACA...AGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCTCCACGTTGGTCAGCTaGAGGTCCATCTCTGTGAGC +
Preference number: 2 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSSTLVS*RSISVS
Trigger: GCTCACAGAGATGGACCTGCAGCTGACCAACGTGGA...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp TGCTTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTCTGAGAGCCCGGGGGTCTaGCTTTGGATCGGTGACATG +
Preference number: 2 (lower is better)
Translates to: CFARGAGTDVAGGWSPESESPGV*LWIGDM
Trigger: CATGTCACCGATCCAAAGGCAGACCCCCGGGCTCTC...AGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp TGCATGAGCGACTGTCGTAAGCCCCCTCTCCAGCTGTCCACTGCGCCCTGTGCTTCTGGGGCCACGTGCTaGGCACCCTTGGCAATCAGG +
Preference number: 2 (lower is better)
Translates to: CMSDCRKPPLQLSTAPCASGATC*APLAIR
Trigger: CCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGA...AGCACAGGGCGCAGTGGACAGCTGGAGAGGGGGCTTACGACAGTCGCTCATGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCACTCAGATTGGTCTaGGGCCACGTGCTGGGCACC +
Preference number: 2 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSLRLV*GHVLGT
Trigger: GGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTCACTCAGATTGGTCTaGGGCCACGTGCTGGGCACC +
Preference number: 2 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASLRLV*GHVLGT
Trigger: GGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp GCAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTGTTTATAAGGGGTGCTaGACGCAGGGGGAACAGGTG +
Preference number: 2 (lower is better)
Translates to: AGGWSPESTSSKLGRGEAVYKGC*TQGEQV
Trigger: CACCTGTTCCCCCTGCGTCCAGCACCCCTTATAAAC...AGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp AGCGGTGGAGTTCCTCCAGCTCATCCTCAATCAGCACAGCATCCAGGGGCTCGCTCCGCAGGACGGCTGTaGCCCGCCTCTGAAGGTTGT +
Preference number: 2 (lower is better)
Translates to: SGGVPPAHPQSAQHPGARSAGRL*PASEGC
Trigger: ACAACCTTCAGAGGCGGGTCACAGCCGTCCTGCGGA...GCGAGCCCCTGGATGCTGTGCTGATTGAGGATGAGCTGGAGGAACTCCACCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp GCAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTCCTTGCTGCTCACGTTaGCAGAGACCACTAATGCCT +
Preference number: 2 (lower is better)
Translates to: AGGWSPESTSSKLGRGEAPCCSR*QRPLMP
Trigger: AGGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGG...AGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp GCAGGAGGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCACAGGCATCGGAGTCGTaGAGTAGGACGTCACAGATG +
Preference number: 2 (lower is better)
Translates to: AGGEPPVEPGDPSKHLLAQASES*SRTSQM
Trigger: CATCTGTGACGTCCTACTGCACGACTCCGATGCCTG...TGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACCTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCCATCTGCTTCAGCCTaGTGGCCGTGTCTGTGCGGT +
Preference number: 2 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCPSASA*WPCLCG
Trigger: ACCGCACAGACACGGCCAGCAGGCTGAAGCAGATGG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCTGGGGCCACGTGCTaGGCACCCTTGGCAATCAGG +
Preference number: 2 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSGATC*APLAIR
Trigger: CCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCCAGGGAGCCCGTGCTaGGTAAGCCCAGAAGAAGTC +
Preference number: 2 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGPGSPC*VSPEEV
Trigger: GACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCTCATGCGCCGCTCCATaGACATGGCACAAATGTTCC +
Preference number: 2 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSSCAAP*TWHKCS
Trigger: GGAACATTTGTGCCATGTCCATGGAGCGGCGCATGA...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp GAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTGGGTAGAAGTGCTCCACGTTaGTCAGCTGCAGGTCCATCT +
Preference number: 2 (lower is better)
Translates to: EAGPPSLPRRSWAGVRLGRSAPR*SAAGPS
Trigger: AGATGGACCTGCAGCTGACCAACGTGGAGCACTTCT...ACCCAGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCCAGAAGAAGTCTaGACAGGTCCCGGGACCTTG +
Preference number: 2 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCSPEEV*TGPGTL
Trigger: CAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR GCA 90 bp GCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCGCCAGCCGCCGGTACTaGTTGTTGATGAGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: ACSDARDRKGCREHATSGASRRY*LLMSSS
Trigger: GCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGC...GCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTGGCAATCAGGCAGGTaGTGTAGCACTGTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGWQSGR*CSTVAS
Trigger: GCTGGCCACAGTGCTACACCACCTGCCTGATTGCCA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCACTCAGATTGGTCTaGGGCCACGTGCTGGGCACC +
Preference number: 2 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSLRLV*GHVLGT
Trigger: GGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCTAAGTCACTCAGATTaGTCTGGGGCCACGTGCTGG +
Preference number: 2 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPLSHSD*SGATCW
Trigger: CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCTAAGTCACTCAGATTaGTCTGGGGCCACGTGCTGG +
Preference number: 2 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLALSHSD*SGATCW
Trigger: CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp TGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCATCCGAAATGCCAGGGAGCCCGTGCTaGGTAAGCCCAGAAGAAGTC +
Preference number: 2 (lower is better)
Translates to: CSGQEGLSGTCHEWPSEMPGSPC*VSPEEV
Trigger: GACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG...CATTTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGTCTGTCCAGGCTCCTaGTGGTCTGCTGGATCGAGT +
Preference number: 2 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCVCPGS*WSAGSS
Trigger: ACTCGATCCAGCAGACCACCAGGAGCCTGGACAGAC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CAA 90 bp AGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATaGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: SLHRSRDLANTKSLR*VWGHVLGTLGNQAG
Trigger: ACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTaGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGG +
Preference number: 2 (lower is better)
Translates to: PCWVSPEEVCTGPGT*PTLSHSDWSGATCW
Trigger: CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR TCA 90 bp TGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGCCTGGAGGTCCTCTCAGCTGACTTaGGCCAGTCCTCAAAGCGAG +
Preference number: 2 (lower is better)
Translates to: WVAIQDSRAFFATIRAWRSSQLT*ASPQSE
Trigger: CTCGCTTTGAGGACTGGCTCAAGTCAGCTGAGAGGA...CCTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTGCCGTCCTCTCAGCTaGCTTGAGCCAGTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGCRPLS*LEPVLK
Trigger: TTTGAGGACTGGCTCAAGTCAGCTGAGAGGACGGCA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp TCCTGCTGTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGAGGGGCTCGCTCTTCTaGATCAGCTGCTCCCCAAAC +
Preference number: 2 (lower is better)
Translates to: SCCGLPFRTRGPSLPPSVRGSLF*ISCSPN
Trigger: GTTTGGGGAGCAGCTGATTCAGAAGAGCGAGCCCCT...CACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCACAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp GGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACTGCTGGCCGTGTCTGTaGGGTTCTCCCGGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: GFWVPCKAIKSWDTCSRNCWPCL*GSPGPA
Trigger: GGCTGGCCCGGGAGAACCGCACAGACACGGCCAGCA...GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATGGCAATCAGGCAGGTaGTGTAGCACTGTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTWQSGR*CSTVAS
Trigger: GCTGGCCACAGTGCTACACCACCTGCCTGATTGCCA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp CTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCCTCCTGGTGGTCTGCTaGATCGAGTCACACTCGGTC +
Preference number: 2 (lower is better)
Translates to: LVVMLGTGRAVGNMPRVALLVVC*IESHSV
Trigger: GACCGAGTGTGACTCGATCCAGCAGACCACCAGGAG...GGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp TCCTGCTGTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGGTCTGTCCAGGCTCCTaGTGGTCTGCTGGATCGAGT +
Preference number: 2 (lower is better)
Translates to: SCCGLPFRTRGPSLPPSVVCPGS*WSAGSS
Trigger: ACTCGATCCAGCAGACCACCAGGAGCCTGGACAGAC...CACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCACAGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp TGCTTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTCTTGGAAGCCATTCAGTTaGCGCATCTTGTCATCGGCG +
Preference number: 2 (lower is better)
Translates to: CFARGAGTDVAGGWSPESWKPFS*RILSSA
Trigger: CGCCGATGACAAGATGCGCCAACTGAATGGCTTCCA...AGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTCTGCCTCCGGTTCTTaGCACTCGCTAACCACAGCA +
Preference number: 2 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCSASGS*HSLTTA
Trigger: TGCTGTGGTTAGCGAGTGCCAAGAACCGGAGGCAGA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATGGTCTGGGGCCACGTaGTGGGCACCCTTGGCAATC +
Preference number: 2 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSWSGAT*WAPLAI
Trigger: GATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR GCA 90 bp TGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGCCTGGAGGTCTCCTCGATTTTCATaGGCCGCTCCATGGACATGG +
Preference number: 2 (lower is better)
Translates to: WVAIQDSRAFFATIRAWRSPRFS*AAPWTW
Trigger: CCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGA...CCTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp TCGCCTTCTGTAGTTCTCACTGCTCTGAACTGCTTTGCTCGGGGAGCTGGCACGCTTCCTGCTGTGGGTTaGCATTCAGGACTCGCGGGC +
Preference number: 2 (lower is better)
Translates to: SPSVVLTALNCFARGAGTLPAVG*HSGLAG
Trigger: GCCCGCGAGTCCTGAATGGCAACCCACAGCAGGAAG...CGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAAGGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp CCTTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGTCACTCAGATTGGTCTaGGGCCACGTGCTGGGCACC +
Preference number: 2 (lower is better)
Translates to: PFPVALVPSDTLGEPGGLSLRLV*GHVLGT
Trigger: GGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGA...CAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp AGCGGTGGAGTTCCTCCAGCTCATCCTCAATCAGCACAGCATCCAGGGGCTCGCCTAAGTCACTCAGATTaGTCTGGGGCCACGTGCTGG +
Preference number: 2 (lower is better)
Translates to: SGGVPPAHPQSAQHPGARLSHSD*SGATCW
Trigger: CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAG...GCGAGCCCCTGGATGCTGTGCTGATTGAGGATGAGCTGGAGGAACTCCACCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAGAAGTGCTCCACGTTaGTCAGCTGCAGGTCCATCT +
Preference number: 2 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGRSAPR*SAAGPS
Trigger: AGATGGACCTGCAGCTGACCAACGTGGAGCACTTCT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp TCGCCTTCTGTAGTTCTCACTGCTCTGAACTGCTTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTaGTCCCCCGAGTCTACCTCG +
Preference number: 2 (lower is better)
Translates to: SPSVVLTALNCFARGAGTDVAGG*SPESTS
Trigger: CGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATC...CGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAAGGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCCCAGAATTCACAAAGTaGTTGGCTCTTCAGGAAACT +
Preference number: 2 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSPEFTK*LALQET
Trigger: AGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGG...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp GGGCCACTAGATGACACAGGGACTGAGGAGATGACGGTTCCTCGCTCTCTCCCCCAGGTTCCCTGCTCCTaGGGAGGAACACAATCTGAA +
Preference number: 2 (lower is better)
Translates to: GPLDDTGTEEMTVPRSLPQVPCS*GGTQSE
Trigger: TTCAGATTGTGTTCCTCCCCAGGAGCAGGGAACCTG...GGGGAGAGAGCGAGGAACCGTCATCTCCTCAGTCCCTGTGTCATCTAGTGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp CCTTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGTGTCCAGGCTCCTGGTaGTCTGCTGGATCGAGTCAC +
Preference number: 2 (lower is better)
Translates to: PFPVALVPSDTLGEPGGLCPGSW*SAGSSH
Trigger: GTGACTCGATCCAGCAGACCACCAGGAGCCTGGACA...CAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp CCTTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGCGTGTACAACACCTCTaGGGAATTTGGGCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: PFPVALVPSDTLGEPGGLRVQHL*GIWAGC
Trigger: GCAGCCTGCCCAAATTCCTCAGAGGTGTTGTACACG...CAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp TCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCAATACCCGGGGCACCTaGCACACAGGTTCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: SLSPRLRQESVWISLGSSNTRGT*HTGSLL
Trigger: GAGCAGGGAACCTGTGTGGCAGGTGCCCCGGGTATT...GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATCGAAGGCACCTGACTaGTGCTCTGTGATACCGGCC +
Preference number: 2 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSKAPD*CSVIPA
Trigger: GGCCGGTATCACAGAGCAGCAGTCAGGTGCCTTCGA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATCTGCTTCAGCCTGCTaGCCGTGTCTGTGCGGTTCT +
Preference number: 2 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSASAC*PCLCGS
Trigger: AGAACCGCACAGACACGGCCAGCAGGCTGAAGCAGA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp GGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACCGCTGGTTGCCCTCGTaGACCATCTGCTTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: GFWVPCKAIKSWDTCSRNRWLPS*TICFSL
Trigger: CAGGCTGAAGCAGATGGTCCACGAGGGCAACCAGCG...GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp GCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGGTGGAAATGTAATTTCCTGTTaGAAGCCATTCAGTTGGCGC +
Preference number: 2 (lower is better)
Translates to: AAGGTGRPFQTPPGSSGGNVISC*KPFSWR
Trigger: GCGCCAACTGAATGGCTTCCAACAGGAAATTACATT...TCCACCGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACAGTGCGCTGTAGTATaGGCCCTCCTCGTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSQCAVV*ALLVLF
Trigger: GAAGAGGACGAGGAGGGCCCATACTACAGCGCACTG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CAA 90 bp GGAGACAGGGCTTTTAAGAGGGATTCAGTCATCCCGATCTGGGTCTaGGCTTGGTCGAGATCCTCCCTTAGCTCAGCAGTGCTGCCACTG +
Preference number: 2 (lower is better)
Translates to: GDRAFKRDSVIPIWV*AWSRSSLSSAVLPL
Trigger: CAGTGGCAGCACTGCTGAGCTAAGGGAGGATCTCGACCAAGCCAAGACCCAGATCGGGATGACTGAATCCCTCTTAAAAGCCCTGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGTGCCTATGAGTTTCTaGACCATTTCTAGGGTGGAA +
Preference number: 2 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCVPMSF*TISRVE
Trigger: TTCCACCCTAGAAATGGTTCAGAAACTCATAGGCAC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR TCA 90 bp TGCAGTCTCTTCACTCTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCGCTGTGACCCGCCTCTaGAGGTTGTCCCAGCGCTGG +
Preference number: 2 (lower is better)
Translates to: CSLFTLSSISWISEGGFAAVTRL*RLSQRW
Trigger: CCAGCGCTGGGACAACCTTCAGAGGCGGGTCACAGC...GGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAGAGTGAAGAGACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCCCAAACACAATGAGCTaGTCAATCTTGTTGGTATTT +
Preference number: 2 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSPNTMS*SILLVF
Trigger: AAATACCAACAAGATTGATCAGCTCATTGTGTTTGG...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp GCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCGCTCCCCAAACACAATaGGCTGATCAATCTTGTTGG +
Preference number: 2 (lower is better)
Translates to: ACSDARDRKGCREHATSGAPQTQ*ADQSCW
Trigger: CCAACAAGATTGATCAGCTCATTGTGTTTGGGGAGC...GCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp TCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACTGTTCTGACTGCTGCTCTGTaGTACCGGCCAGTCCCCCGT +
Preference number: 2 (lower is better)
Translates to: SGFPARPLNLGTLAPVTVLTAAL*YRPVPR
Trigger: ACGGGGGACTGGCCGGTATCACAGAGCAGCAGTCAG...AACAGTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp TCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCAGGCTCCTGGTGGTCTaGTGGATCGAGTCACACTCG +
Preference number: 2 (lower is better)
Translates to: SLSPRLRQESVWISLGSSRLLVV*WIESHS
Trigger: CGAGTGTGACTCGATCCAGCAGACCACCAGGAGCCT...GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp GGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACAGTCCCCCGTCTTCCTaGTGTGGGTTGCCATTCAGG +
Preference number: 2 (lower is better)
Translates to: GFWVPCKAIKSWDTCSRNSPPSS*CGLPFR
Trigger: CCTGAATGGCAACCCACAGCAGGAAGACGGGGGACT...GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGCTTTCAGTATCTCCTaGAGTCTCTTCACTCTCAGT +
Preference number: 2 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGAFSIS*SLFTLS
Trigger: ACTGAGAGTGAAGAGACTGCAGGAGATACTGAAAGC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp GCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCGAACCATTTCTAGGGTaGAATGTCCTCGCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: ACSDARDRKGCREHATSGEPFLG*NVLACF
Trigger: GAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC...GCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp AGCTGGCGGAGTCTACTTTGGAGCTCTGTGGATTCGGGGCTCTCGGTTTGCAGACCAGAATGCTCTCCCTaGTGCCCTCAAATTCTTCCC +
Preference number: 2 (lower is better)
Translates to: SWRSLLWSSVDSGLSVCRPECSP*CPQILP
Trigger: GGGAAGAATTTGAGGGCACCAGGGAGAGCATTCTGG...TCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp TCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCTCCTCTCAGCTGACTTaGGCCAGTCCTCAAAGCGAG +
Preference number: 2 (lower is better)
Translates to: SLSPRLRQESVWISLGSSSSQLT*ASPQSE
Trigger: CTCGCTTTGAGGACTGGCTCAAGTCAGCTGAGAGGA...GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp ACTGAGGAGATGACGGTTCCTCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTATCGGCGTCACTCTCTaGGAAGTGCTCCACGTTGGT +
Preference number: 2 (lower is better)
Translates to: TEEMTVPRSLPVYAKNQSIGVTL*EVLHVG
Trigger: ACCAACGTGGAGCACTTCTCAGAGAGTGACGCCGAT...AGACTGATTCTTGGCGTAAACGGGGAGAGAGCGAGGAACCGTCATCTCCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp TCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCATCGGCGTCACTCTCTaGGAAGTGCTCCACGTTGGT +
Preference number: 2 (lower is better)
Translates to: SLSPRLRQESVWISLGSSIGVTL*EVLHVG
Trigger: ACCAACGTGGAGCACTTCTCAGAGAGTGACGCCGAT...GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp CATCCGAAATGGATTTACCTGACAGTGCGCTGTAGTATGGGCCCTCCTCGTCCTCTAAGTCACTCAGATTaGTCTGGGGCCACGTGCTGG +
Preference number: 2 (lower is better)
Translates to: HPKWIYLTVRCSMGPPRPLSHSD*SGATCW
Trigger: CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAG...AGGACGAGGAGGGCCCATACTACAGCGCACTGTCAGGTAAATCCATTTCGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACAGGTTCCCTGCTCCTaGGGAGGAACACAATCTGAA +
Preference number: 2 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSQVPCS*GGTQSE
Trigger: TTCAGATTGTGTTCCTCCCCAGGAGCAGGGAACCTG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR TCA 90 bp TGCAGTCTCTTCACTCTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCCAGGGACTGAGGAGATaGCGGTTCCTCGCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: CSLFTLSSISWISEGGFAQGLRR*RFLALS
Trigger: GGAGAGAGCGAGGAACCGTCATCTCCTCAGTCCCTG...GGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAGAGTGAAGAGACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATTCAGTGAGGGTCTTCTaGACCAGCGGGGCCTCGCTG +
Preference number: 2 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYSVRVF*TSGASL
Trigger: CAGCGAGGCCCCGCTGGTTCAGAAGACCCTCACTGA...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTGGTCTGGGGCCACGTaGTGGGCACCCTTGGCAATC +
Preference number: 2 (lower is better)
Translates to: LGWNVLACFYNICDGHHCWSGAT*WAPLAI
Trigger: GATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATGGTCTGGGGCCACGTaGTGGGCACCCTTGGCAATC +
Preference number: 2 (lower is better)
Translates to: GWNVLACFYNICDGHHCSWSGAT*WAPLAI
Trigger: GATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR GCA 90 bp ACTGAGGAGATGACGGTTCCTCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTTCACTCTCTGAGAAGTaGTCCACGTTGGTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: TEEMTVPRSLPVYAKNQSSLSEK*STLVSC
Trigger: GCAGCTGACCAACGTGGAGCACTTCTCAGAGAGTGA...AGACTGATTCTTGGCGTAAACGGGGAGAGAGCGAGGAACCGTCATCTCCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCTGGGGCCACGTGCTaGGCACCCTTGGCAATCAGG +
Preference number: 2 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSGATC*APLAIR
Trigger: CCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp CATCCGAAATGGATTTACCTGACAGTGCGCTGTAGTATGGGCCCTCCTCGTCCTCAGGTTCCCTGCTCCTaGGGAGGAACACAATCTGAA +
Preference number: 2 (lower is better)
Translates to: HPKWIYLTVRCSMGPPRPQVPCS*GGTQSE
Trigger: TTCAGATTGTGTTCCTCCCCAGGAGCAGGGAACCTG...AGGACGAGGAGGGCCCATACTACAGCGCACTGTCAGGTAAATCCATTTCGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp ACTGAGGAGATGACGGTTCCTCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTCCAGAATGCTCTCCCTaGTGCCCTCAAATTCTTCCC +
Preference number: 2 (lower is better)
Translates to: TEEMTVPRSLPVYAKNQSPECSP*CPQILP
Trigger: GGGAAGAATTTGAGGGCACCAGGGAGAGCATTCTGG...AGACTGATTCTTGGCGTAAACGGGGAGAGAGCGAGGAACCGTCATCTCCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp TCGCCTTCTGTAGTTCTCACTGCTCTGAACTGCTTTGCTCGGGGAGCTGGCACGGGAACATGCCACGAGTaGCCATCCGAAATGGATTTA +
Preference number: 2 (lower is better)
Translates to: SPSVVLTALNCFARGAGTGTCHE*PSEMDL
Trigger: TAAATCCATTTCGGATGGCCACTCGTGGCATGTTCC...CGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAAGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp GGCTGTTTGAAATCTCCTGTAACATGTCCACTTGAGGTTGACGTTCTACCAGCTGCCAGCCGCCGGTACTaGTTGTTGATGAGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: GCLKSPVTCPLEVDVLPAASRRY*LLMSSS
Trigger: GCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGC...AGCTGGTAGAACGTCAACCTCAAGTGGACATGTTACAGGAGATTTCAAACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCGTGCTGGGCACCCTTaGCAATCAGGCAGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: LGWNVLACFYNICDGHHCRAGHP*QSGRWC
Trigger: ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAGAACCATTTCTAGGGTaGAATGTCCTCGCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSEPFLG*NVLACF
Trigger: GAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp TGCTTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTCTAAATTGCCAGCTGATTaGAGTAAAACTGATTCTAAG +
Preference number: 2 (lower is better)
Translates to: CFARGAGTDVAGGWSPESKLPAD*SKTDSK
Trigger: CTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTT...AGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp TCGCCTTCTGTAGTTCTCACTGCTCTGAACTGCTTTGCTCGGGGAGCTGGCACGCAGTCTGGATTTCTCTaGGGTCTTCCATGTCTGTTT +
Preference number: 2 (lower is better)
Translates to: SPSVVLTALNCFARGAGTQSGFL*GLPCLF
Trigger: AAACAGACATGGAAGACCCCAGAGAAATCCAGACTG...CGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAAGGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp GAGCCAACTGATAAGCTCCTTCACATGTGCTTTGGGCAGATGCTTCTTCACATGCAGCAGTGCTGCCACTaGGTGCATGGCAGTTGGATT +
Preference number: 2 (lower is better)
Translates to: EPTDKLLHMCFGQMLLHMQQCCH*VHGSWI
Trigger: AATCCAACTGCCATGCACTCAGTGGCAGCACTGCTG...CATGTGAAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTTATCAGTTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAATACCCGGGGCACCTaGCACACAGGTTCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: KRAELGTEQNILVYNRQLNTRGT*HTGSLL
Trigger: GAGCAGGGAACCTGTGTGGCAGGTGCCCCGGGTATT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATGTGATGGACACCACTaGTCATTGACCATACCTACA +
Preference number: 2 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSCDGHH*SLTIPT
Trigger: TGTAGGTATGGTCAATGAGCAGTGGTGTCCATCACA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTCTGGGGCCACGTGCTaGGCACCCTTGGCAATCAGG +
Preference number: 2 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESGATC*APLAIR
Trigger: CCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTGTCCAGGCTCCTGGTaGTCTGCTGGATCGAGTCAC +
Preference number: 2 (lower is better)
Translates to: LGWNVLACFYNICDGHHCCPGSW*SAGSSH
Trigger: GTGACTCGATCCAGCAGACCACCAGGAGCCTGGACA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp TCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTCATGCGCCGCTCCATaGACATGGCACAAATGTTCC +
Preference number: 2 (lower is better)
Translates to: SGFPARPLNLGTLAPVTVSCAAP*TWHKCS
Trigger: GGAACATTTGTGCCATGTCCATGGAGCGGCGCATGA...AACAGTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCCCGATGTTTCACAGCTaGAACAGTAGGATCCTTAAG +
Preference number: 2 (lower is better)
Translates to: SCCKESSSSFARAWHMDSPMFHS*NSRILK
Trigger: CTTAAGGATCCTACTGTTCCAGCTGTGAAACATCGG...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp TTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGTCTTCAGTCATCCCGATCTaGGTCTTGGCTTGGTCGAGA +
Preference number: 2 (lower is better)
Translates to: FLRFLWSSWSLSSCCKESSVIPI*VLAWSR
Trigger: TCTCGACCAAGCCAAGACCCAGATCGGGATGACTGA...AGACTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp ACTGAGGAGATGACGGTTCCTCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGTGCCTATGAGTTTCTaGACCATTTCTAGGGTGGAA +
Preference number: 2 (lower is better)
Translates to: TEEMTVPRSLPVYAKNQSVPMSF*TISRVE
Trigger: TTCCACCCTAGAAATGGTTCAGAAACTCATAGGCAC...AGACTGATTCTTGGCGTAAACGGGGAGAGAGCGAGGAACCGTCATCTCCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTAATACCCGGGGCACCTaGCACACAGGTTCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: AELGTEQNILVYNRQLKINTRGT*HTGSLL
Trigger: GAGCAGGGAACCTGTGTGGCAGGTGCCCCGGGTATT...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACCAGAATTCACAAAGTaGTTGGCTCTTCAGGAAACT +
Preference number: 2 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSPEFTK*LALQET
Trigger: AGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR GCA 90 bp GGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACCCGGCAGCTCAAAATTaGCAGCTGATTGGAGTAAAA +
Preference number: 2 (lower is better)
Translates to: GFWVPCKAIKSWDTCSRNPAAQN*QLIGVK
Trigger: TTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGG...GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCGTGCTGGGCACCCTTaGCAATCAGGCAGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRRAGHP*QSGRWC
Trigger: ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCGTGCTGGGCACCCTTaGCAATCAGGCAGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: AELGTEQNILVYNRQLKIRAGHP*QSGRWC
Trigger: ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCTAAGTCACTCAGATTaGTCTGGGGCCACGTGCTGG +
Preference number: 2 (lower is better)
Translates to: LGWNVLACFYNICDGHHCLSHSD*SGATCW
Trigger: CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp TCGCCTTCTGTAGTTCTCACTGCTCTGAACTGCTTTGCTCGGGGAGCTGGCACGAATTCACAAAGTGCTTaGCTCTTCAGGAAACTGACA +
Preference number: 2 (lower is better)
Translates to: SPSVVLTALNCFARGAGTNSQSA*LFRKLT
Trigger: TGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATT...CGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAAGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CAA 90 bp AGATCCTCCCTTAGCTCAGCAGTGCTGCCACTGAGTGCATGGCAGTaGGATTCTCCTGTTAAGCACTTCTGTACATGTTCCATCTTGTTC +
Preference number: 2 (lower is better)
Translates to: RSSLSSAVLPLSAWQ*DSPVKHFCTCSILF
Trigger: GAACAAGATGGAACATGTACAGAAGTGCTTAACAGGAGAATCCAACTGCCATGCACTCAGTGGCAGCACTGCTGAGCTAAGGGAGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp TCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCTCTGAGAGCAGAGCTAGGTACTaGACAGAACATTTTGGTGTA +
Preference number: 2 (lower is better)
Translates to: SCWKPFSWRILSSASLSESRARY*TEHFGV
Trigger: TACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCT...CTCAGAGAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATGCCGTCCTCTCAGCTaGCTTGAGCCAGTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: RAELGTEQNILVYNRQLKCRPLS*LEPVLK
Trigger: TTTGAGGACTGGCTCAAGTCAGCTGAGAGGACGGCA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGTCAGCATCAATGAGATaGAATCCCTGGATGGCCATT +
Preference number: 2 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKESASMR*NPWMAI
Trigger: AATGGCCATCCAGGGATTTCATCTCATTGATGCTGA...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAATACCCGGGGCACCTaGCACACAGGTTCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPNTRGT*HTGSLL
Trigger: GAGCAGGGAACCTGTGTGGCAGGTGCCCCGGGTATT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR GCA 90 bp TGCAGTCTCTTCACTCTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCGAATGCTCTCCCTGGTaGCCTCAAATTCTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: CSLFTLSSISWISEGGFAECSPW*PQILPS
Trigger: AGAGGGAAGAATTTGAGGGCACCAGGGAGAGCATTC...GGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAGAGTGAAGAGACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCTGGTCAAGGCAATCATaGTTTGGTTCCCTGCCCGTT +
Preference number: 2 (lower is better)
Translates to: CKTVATRTWTVQELSPFCWSRQS*FGSLPV
Trigger: AACGGGCAGGGAACCAAAGCATGATTGCCTTGACCA...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTGGCAATCAGGCAGGTaGTGTAGCACTGTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRWQSGR*CSTVAS
Trigger: GCTGGCCACAGTGCTACACCACCTGCCTGATTGCCA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACGTGCTGGGCACCCTTaGCAATCAGGCAGGTGGTGT +
Preference number: 2 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPRAGHP*QSGRWC
Trigger: ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACCAGGGAGCCCGTGCTaGGTAAGCCCAGAAGAAGTC +
Preference number: 2 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPPGSPC*VSPEEV
Trigger: GACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCTCCTGGTGGTCTGCTaGATCGAGTCACACTCGGTC +
Preference number: 2 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRLLVVC*IESHSV
Trigger: GACCGAGTGTGACTCGATCCAGCAGACCACCAGGAG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATTGGATGGCCATTTTATaGAGAGGCAGGTCCGAGCCA +
Preference number: 2 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYWMAIL*RGRSEP
Trigger: TGGCTCGGACCTGCCTCTCCATAAAATGGCCATCCA...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACATCTGGGTCTTGGCTTaGTCGAGATCCTCCCTTAGC +
Preference number: 2 (lower is better)
Translates to: SSTWDSISAGTMVYISEYIWVLA*SRSSLS
Trigger: GCTAAGGGAGGATCTCGACCAAGCCAAGACCCAGAT...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTTCCCGATCTGGGTCTTaGCTTGGTCGAGATCCTCCC +
Preference number: 2 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCSRSGS*LGRDPP
Trigger: GGGAGGATCTCGACCAAGCCAAGACCCAGATCGGGA...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp GCTTCCAGCAAACTCAGCCATTTCTCCCACAGAGCCGACACAATCTaGAGCAAACATATGCCATCATTTTCTGTGCACCTGAGTCTCAAG +
Preference number: 2 (lower is better)
Translates to: ASSKLSHFSHRADTI*SKHMPSFSVHLSLK
Trigger: CTTGAGACTCAGGTGCACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAATGGCTGAGTTTGCTGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCTGCGATCAGCATCAATaGGATGAAATCCCTGGATGG +
Preference number: 2 (lower is better)
Translates to: CKTVATRTWTVQELSPFCCDQHQ*DEIPGW
Trigger: CCATCCAGGGATTTCATCTCATTGATGCTGATCGCA...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAGCCCAGAAGAAGTCTaGACAGGTCCCGGGACCTTG +
Preference number: 2 (lower is better)
Translates to: EPFLGWNVLACFYNICDGSPEEV*TGPGTL
Trigger: CAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACTCACTGCTCTGAACTaGTTTGCTCGGGGAGCTGGC +
Preference number: 2 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPLTALN*FARGAG
Trigger: GCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCTCGCTGCTCTCAGCCTaGTTCATGATGGTCTCTATT +
Preference number: 2 (lower is better)
Translates to: CKTVATRTWTVQELSPFCSLLSA*FMMVSI
Trigger: AATAGAGACCATCATGAAGCAGGCTGAGAGCAGCGA...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACCATGCTTTGGTTCCCTaGCCGTTCTTCTGGAGACTT +
Preference number: 2 (lower is better)
Translates to: SSTWDSISAGTMVYISEYHALVP*PFFWRL
Trigger: AAGTCTCCAGAAGAACGGGCAGGGAACCAAAGCATG...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACAGTGATGCTCTCCACTaGCCTGGTGACTGCTTCTTT +
Preference number: 2 (lower is better)
Translates to: SSTWDSISAGTMVYISEYSDALH*PGDCFF
Trigger: AAAGAAGCAGTCACCAGGGCAGTGGAGAGCATCACT...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATGGCAATCAGGCAGGTaGTGTAGCACTGTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: RTFWCITGSSKLPADWSKWQSGR*CSTVAS
Trigger: GCTGGCCACAGTGCTACACCACCTGCCTGATTGCCA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp GGCTGTTTGAAATCTCCTGTAACATGTCCACTTGAGGTTGACGTTCTACCAGCTTACTTTGGAGCTCTGTaGATTCGGGGCTCTCGGTTT +
Preference number: 2 (lower is better)
Translates to: GCLKSPVTCPLEVDVLPAYFGAL*IRGSRF
Trigger: AAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTA...AGCTGGTAGAACGTCAACCTCAAGTGGACATGTTACAGGAGATTTCAAACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCAAGGCAATCATGCTTTaGTTCCCTGCCCGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: CKTVATRTWTVQELSPFCKAIML*FPARSS
Trigger: AGAAGAACGGGCAGGGAACCAAAGCATGATTGCCTT...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACGTGGCAACGAGGACATaGACTGTCCAAGAACTGTCT +
Preference number: 2 (lower is better)
Translates to: SSTWDSISAGTMVYISEYVATRT*TVQELS
Trigger: AGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCAC...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp CTTTGCCACCATCCGTGCCTGGAGGTAATAGTAGCTTTCCATAGGGTGGTTTATTGTGATGGACACCACTaGTCATTGACCATACCTACA +
Preference number: 2 (lower is better)
Translates to: LCHHPCLEVIVAFHRVVYCDGHH*SLTIPT
Trigger: TGTAGGTATGGTCAATGAGCAGTGGTGTCCATCACA...ATAAACCACCCTATGGAAAGCTACTATTACCTCCAGGCACGGATGGTGGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACTGGAGTCTCAGTAGCTaGTGCAAGGAGTCTTCAAGC +
Preference number: 2 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHWSLSS*CKESSS
Trigger: GCTTGAAGACTCCTTGCAGCAGCTACTGAGACTCCA...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAACAGTGGCTTAATGGCTaGTTTCTTTGCTTCCAACTG +
Preference number: 2 (lower is better)
Translates to: LPWQLSPPWELSVFHFLEQWLNG*FLCFQL
Trigger: CAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTG...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCTGGGGCCACGTGCTaGGCACCCTTGGCAATCAGG +
Preference number: 2 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSGATC*APLAIR
Trigger: CCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp TGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATGAGAAGGTGGAAGCCATTCAGTTaGCGCATCTTGTCATCGGCG +
Preference number: 2 (lower is better)
Translates to: CTFSSASIQSSPCPLMRRWKPFS*RILSSA
Trigger: CGCCGATGACAAGATGCGCCAACTGAATGGCTTCCA...CCTTCTCATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp GAGCCAACTGATAAGCTCCTTCACATGTGCTTTGGGCAGATGCTTCTTCACATGCTCCTCTGCACCCTGTaGTTCATTCCTTCAAATTGT +
Preference number: 2 (lower is better)
Translates to: EPTDKLLHMCFGQMLLHMLLCTL*FIPSNC
Trigger: ACAATTTGAAGGAATGAACCACAGGGTGCAGAGGAG...CATGTGAAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTTATCAGTTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAAAGCTCTGGTCCTCTGTaGGTAGTAACTTATCCTCTT +
Preference number: 2 (lower is better)
Translates to: LPWQLSPPWELSVFHFLESSGPL*VVTYPL
Trigger: AAGAGGATAAGTTACTACCCACAGAGGACCAGAGCT...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACAGTGTGTTGTCCCACTaGTTGCTGATGTCAGTGAGG +
Preference number: 2 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHSVLSH*LLMSVR
Trigger: CCTCACTGACATCAGCAACCAGTGGGACAACACACT...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTTTAGTTCAGCTTCCGTaGCAGCTGTCTCCACCCTGG +
Preference number: 2 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFLVQLP*QLSPPW
Trigger: CCAGGGTGGAGACAGCTGCCACGGAAGCTGAACTAA...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATAGAGTTCCTCTGTGGTaGCTGCCTCTTTTGTTTTGG +
Preference number: 2 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYRVPLW*LPLLFW
Trigger: CCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCT...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp GTGGAGAACCAAGGCCCCAGTTTCTGTTTTGTTAAGACATTCTGTTaGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGT +
Preference number: 2 (lower is better)
Translates to: VENQGPSFCFVKTFC*FQWLNGCFLCFQLG
Trigger: ACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGAATGTCTTAACAAAACAGAAACTGGGGCCTTGGTTCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATGTTCAAGACATTCGGTaGCCAAGGCTTTGGTATTCT +
Preference number: 2 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYVQDIR*PRLWYS
Trigger: AGAATACCAAAGCCTTGGTCACCGAATGTCTTGAAC...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTTCATGTTCTCGAACGTaGCCGTCCAAGTTTTGCACA +
Preference number: 2 (lower is better)
Translates to: RMLLRQHSISCLADASLFSCSRT*PSKFCT
Trigger: TGTGCAAAACTTGGACGGTCACGTTCGAGAACATGA...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACGACGCAAACCTGGTATaGATCATGTTCTCGAACGTG +
Preference number: 2 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHDANLV*IMFSNV
Trigger: CACGTTCGAGAACATGATTCATACCAGGTTTGCGTC...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAAAATCTTCTGCCCCACTaGAGATGTATTTTGCTTGAC +
Preference number: 2 (lower is better)
Translates to: LPWQLSPPWELSVFHFLENLLPH*RCILLD
Trigger: GTCAAGCAAAATACATCTTCAGTGGGGCAGAAGATT...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGTCTGTCAGTTTAGCCTaGAGACAAGAACTACTCCTG +
Preference number: 2 (lower is better)
Translates to: SREFSCSERRQKVFQSFESVSLA*RQELLL
Trigger: CAGGAGTAGTTCTTGTCTGCAGGCTAAACTGACAGA...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp CTTTCGTGTAGATGCTTTATTTCCAGCCAAGGCTCTTCACTGAAGCTGGGATTTGTATCTTCACTCCTCTaGACCCTGTGGTTCATTCCT +
Preference number: 2 (lower is better)
Translates to: LSCRCFISSQGSSLKLGFVSSLL*TLWFIP
Trigger: AGGAATGAACCACAGGGTGCAGAGGAGTGAAGATAC...AAATCCCAGCTTCAGTGAAGAGCCTTGGCTGGAAATAAAGCATCTACACGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGCAAGAGGTATTTCACTaGTTTGGAGCAAAAACTGTA +
Preference number: 2 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKEQEVFH*FGAKTV
Trigger: TACAGTTTTTGCTCCAAAGCAGTGAAATACCTCTTG...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCAGACTTTCGTGTAGATaGTTTATTTCCAGCCAAGGC +
Preference number: 2 (lower is better)
Translates to: CKTVATRTWTVQELSPFCRLSCR*FISSQG
Trigger: GCCTTGGCTGGAAATAAAGCATCTACACGAAAGTCT...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATCTCCTGCTTAGCAGATaGAAGCCTGTTTTCCAAATC +
Preference number: 2 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYLLLSR*KPVFQI
Trigger: GATTTGGAAAACAGGCTTGCATCTGCTAAGCAGGAG...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCAACTGTAGATGTTGCTaGTGCTGTTGCAGAGAAATC +
Preference number: 2 (lower is better)
Translates to: CKTVATRTWTVQELSPFCNCRCC*CCCREI
Trigger: GATTTCTCTGCAACAGCAGCAGCAACATCTACAGTT...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCCAGGGAGCCCGTGCTaGGTAAGCCCAGAAGAAGTC +
Preference number: 2 (lower is better)
Translates to: KQYKRAELGTEQNILVYNPGSPC*VSPEEV
Trigger: GACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp AATAACATGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATCAGAGCAGGCTCAGCTaGCGGAGTCTACTTTGGAGC +
Preference number: 2 (lower is better)
Translates to: NNMHLFFSFNTVFSMSLNQSRLS*RSLLWS
Trigger: GCTCCAAAGTAGACTCCGCCAGCTGAGCCTGCTCTG...ATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCATGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGGATGAAATCCCTGGATaGCCATTTTATGGAGAGGCA +
Preference number: 2 (lower is better)
Translates to: SREFSCSERRQKVFQSFEDEIPG*PFYGEA
Trigger: TGCCTCTCCATAAAATGGCCATCCAGGGATTTCATC...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAAAGATCATTAAAGCTCTaGTCCTCTGTGGGTAGTAAC +
Preference number: 2 (lower is better)
Translates to: LPWQLSPPWELSVFHFLERSLKL*SSVGSN
Trigger: GTTACTACCCACAGAGGACCAGAGCTTTAATGATCT...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCCAGAATTCACAAAGTaGTTGGCTCTTCAGGAAACT +
Preference number: 2 (lower is better)
Translates to: LGWNVLACFYNICDGHHCPEFTK*LALQET
Trigger: AGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAGTTGTTGGCCTGAGTaGAGCTGTAGTCTTCTTCGG +
Preference number: 2 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSCWPE*SCSLLR
Trigger: CCGAAGAAGACTACAGCTGCACTCAGGCCAACAACT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCAGATGCTTCTTCACATaGTTCAGTACGCTGTCCACC +
Preference number: 2 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSRCFFT*FSTLST
Trigger: GGTGGACAGCGTACTGAAGCATGTGAAGAAGCATCT...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTAAGCTCCTTCACATGTaGTTTGGGCAGATGCTTCTT +
Preference number: 2 (lower is better)
Translates to: RMLLRQHSISCLADASLFKLLHM*FGQMLL
Trigger: AAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTT...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp AGAGAGTTCCTCTGTGGTGGCTGCCTCTTTTGTTTTGGAAATTTCAGGGAGTTCAGTTCCTGCAGTTTCTaGAATTTTTCCTCAACCGCT +
Preference number: 2 (lower is better)
Translates to: REFLCGGCLFCFGNFREFSSCSF*NFSSTA
Trigger: AGCGGTTGAGGAAAAATTGCAGAAACTGCAGGAACT...GAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTTTGACACCAAGGCCTTaGTCTGTTCCAAGCGCTCTA +
Preference number: 2 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFLTPRP*SVPSAL
Trigger: TAGAGCGCTTGGAACAGAGCAAGGCCTTGGTGTCAA...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACTTCCTCTGTGGTGGCTaGCTCTTTTGTTTTGGAAAT +
Preference number: 2 (lower is better)
Translates to: SSTWDSISAGTMVYISEYFLCGG*LFCFGN
Trigger: ATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAA...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp TGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATGAGAAGGGAACCATTTCTAGGGTaGAATGTCCTCGCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: CTFSSASIQSSPCPLMRREPFLG*NVLACF
Trigger: GAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC...CCTTCTCATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CAA 90 bp GCCGAATATCCTATATTGTGGAGAACCAAGGCCCCAGTTTCTGTTTaGTTAAGACATTCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: AEYPILWRTKAPVSV*LRHSVCSSGLMAAF
Trigger: GAAAGCAGCCATTAAGCCACTGGAACAAACAGAATGTCTTAACAAAACAGAAACTGGGGCCTTGGTTCTCCACAATATAGGATATTCGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp TCTGGGAGAAGGGGAATGGAGGGATTAAGTTCACCCAACAAATTCTaGGCCCATAAGATAGTCTCTTTCATCTTGTTCCTTATGTCACAC +
Preference number: 2 (lower is better)
Translates to: SGRRGMEGLSSPNKF*AHKIVSFILFLMSH
Trigger: GTGTGACATAAGGAACAAGATGAAAGAGACTATCTTATGGGCCAAGAATTTGTTGGGTGAACTTAATCCCTCCATTCCCCTTCTCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp TGCAGTCTCTTCACTCTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCCCAAACACAATGAGCTaGTCAATCTTGTTGGTATTT +
Preference number: 2 (lower is better)
Translates to: CSLFTLSSISWISEGGFAPNTMS*SILLVF
Trigger: AAATACCAACAAGATTGATCAGCTCATTGTGTTTGG...GGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAGAGTGAAGAGACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR TCA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTTCCTCAACCGCTATTTaGTCCACAGGCTTATCAGAA +
Preference number: 2 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCSSTAI*STGLSE
Trigger: TTCTGATAAGCCTGTGGATCAAATAGCGGTTGAGGA...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp AGAGAGTTCCTCTGTGGTGGCTGCCTCTTTTGTTTTGGAAATTTCAGGGAGTTCTGCCATCTTGTAAACTaGGTCTATTCTCTAGTTCCT +
Preference number: 2 (lower is better)
Translates to: REFLCGGCLFCFGNFREFCHLVN*VYSLVP
Trigger: AGGAACTAGAGAATAGACTCAGTTTACAAGATGGCA...GAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTGTGATGGACACCACTaGTCATTGACCATACCTACA +
Preference number: 2 (lower is better)
Translates to: AELGTEQNILVYNRQLKICDGHH*SLTIPT
Trigger: TGTAGGTATGGTCAATGAGCAGTGGTGTCCATCACA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR GCA 90 bp ATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACATCGTCTAAAAACTTCTaGCACAGGCGCCACGTCTCC +
Preference number: 2 (lower is better)
Translates to: IKSWDTCSRNCLSFFSITSSKNF*HRRHVS
Trigger: GGAGACGTGGCGCCTGTGGCAGAAGTTTTTAGACGA...TGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAAAGTACGCTGTCCACCTaGTTTATTTTACTGTTTCTT +
Preference number: 2 (lower is better)
Translates to: LPWQLSPPWELSVFHFLESTLST*FILLFL
Trigger: AAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACT...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCAATACTACACATTTCTaGCCAAACTTGCTCCTGAAA +
Preference number: 2 (lower is better)
Translates to: CKTVATRTWTVQELSPFCNTTHF*PNLLLK
Trigger: TTTCAGGAGCAAGTTTGGGCAGAAATGTGTAGTATT...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGAACCATTTCTAGGGTaGAATGTCCTCGCTTGCTTC +
Preference number: 2 (lower is better)
Translates to: RTFWCITGSSKLPADWSKEPFLG*NVLACF
Trigger: GAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp TCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACTGTTAAATTGCCAGCTGATTaGAGTAAAACTGATTCTAAG +
Preference number: 2 (lower is better)
Translates to: SGFPARPLNLGTLAPVTVKLPAD*SKTDSK
Trigger: CTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTT...AACAGTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CCA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTTCCTTTGCTCGAGCCTaGCATATGGACTCCATTTTT +
Preference number: 2 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCSFARA*HMDSIF
Trigger: AAAAATGGAGTCCATATGCCAGGCTCGAGCAAAGGA...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATATTTCTATGGTCATCCTaGAGTCTCAGTAGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIFLWSS*SLSSCC
Trigger: GCAGCAGCTACTGAGACTCCAGGATGACCATAGAAA...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATTCCATGTCAGTCACGTaGTTTGATAAATTCTCCCAT +
Preference number: 2 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYSMSVT*FDKFSH
Trigger: ATGGGAGAATTTATCAAACCACGTGACTGACATGGA...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATATTCTCAGTGAGGTCCTaGATGTGTGCTACTGTGGAT +
Preference number: 2 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIFSVRS*MCATVD
Trigger: ATCCACAGTAGCACACATCCAGGACCTCACTGAGAA...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp CCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACTGTTaGAGTTTCTTCTCAATAACATGCACCTTTTCTTCAGCTTCAATA +
Preference number: 2 (lower is better)
Translates to: PCKAIKSWDTCSRNC*SFFSITCTFSSASI
Trigger: TATTGAAGCTGAAGAAAAGGTGCATGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CAA 90 bp AACAGTCTAGCAGCTCAGAGAGTTCCTCTGTGGTGGCTGCCTCTTTaGTTTTGGAAATTTCAGGGAGTTCTTCCTGAAGATTATCTAAAA +
Preference number: 2 (lower is better)
Translates to: NSLAAQRVPLWWLPL*FWKFQGVLPEDYLK
Trigger: TTTTAGATAATCTTCAGGAAGAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCTGAGCTGCTAGACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGTGCCTATGAGTTTCTaGACCATTTCTAGGGTGGAA +
Preference number: 2 (lower is better)
Translates to: EPFLGWNVLACFYNICDGVPMSF*TISRVE
Trigger: TTCCACCCTAGAAATGGTTCAGAAACTCATAGGCAC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR TCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTGTATTAAGAGTCATCTaGAGCTCTCTTTCTCTTTCC +
Preference number: 2 (lower is better)
Translates to: RMLLRQHSISCLADASLFVLRVI*SSLSLS
Trigger: GGAAAGAGAAAGAGAGCTTCAGATGACTCTTAATAC...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTTTCCATTTCTCTTCTTaGTTAGTCAACCACTTCCTC +
Preference number: 2 (lower is better)
Translates to: RMLLRQHSISCLADASLFFHFSS*LVNHFL
Trigger: GAGGAAGTGGTTGACTAATCAAGAAGAGAAATGGAA...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp AGAGAGTTCCTCTGTGGTGGCTGCCTCTTTTGTTTTGGAAATTTCAGGGAGTTCATTCCTGAAAATCTCTaGGGACACAATATTGGCTTT +
Preference number: 2 (lower is better)
Translates to: REFLCGGCLFCFGNFREFIPENL*GHNIGF
Trigger: AAAGCCAATATTGTGTCCTCAGAGATTTTCAGGAAT...GAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTCAACAAGGCTTTCATTaGAGATTCAACTGCAGCAAG +
Preference number: 2 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCQQGFH*RFNCSK
Trigger: CTTGCTGCAGTTGAATCTTCAATGAAAGCCTTGTTG...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAGCACTTTCTGATCTGTaGAAGAATGTCATCTGGGAG +
Preference number: 2 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIALSDL*KNVIWE
Trigger: CTCCCAGATGACATTCTTTCACAGATCAGAAAGTGC...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp ATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACAGAATGCTCTCCCTGGTaGCCTCAAATTCTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: IKSWDTCSRNCLSFFSITECSPW*PQILPS
Trigger: AGAGGGAAGAATTTGAGGGCACCAGGGAGAGCATTC...TGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCCCTTTAATACAAAGTTaGCTGGCTCTTCTAAGCGGT +
Preference number: 2 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSPLIQS*LALLSG
Trigger: ACCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGG...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATTTTTGCTGTAGAATCTaGTGTTGTATCTCCTCTAGT +
Preference number: 2 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYFCCRI*CCISSS
Trigger: ACTAGAGGAGATACAACAGCAGATTCTACAGCAAAA...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATATTGTCCAAATGCTGTaGCGAATATCCTATATTGTG +
Preference number: 2 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYIVQML*RISYIV
Trigger: CACAATATAGGATATTCGGCACAGCATTTGGACAAT...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTTTTCTAGCTAAAGCTTaGCAGAACAGCTCAGTTTTC +
Preference number: 2 (lower is better)
Translates to: RMLLRQHSISCLADASLFFLAKA*QNSSVF
Trigger: GAAAACTGAGCTGTTCTGCCAAGCTTTAGCTAGAAA...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTACTGAAGTTGTAGTTTaGCTTCGGGGCTGGATATCA +
Preference number: 2 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFTEVVV*LRGWIS
Trigger: TGATATCCAGCCCCGAAGCCAAACTACAACTTCAGT...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp TGGCAGTTGGATTCTCCTGTTAAGCACTTCTGTACATGTTCCATCTaGTTCAAAATAGAGGACTCCATGACCTGCAATTCAAGAGGTATT +
Preference number: 2 (lower is better)
Translates to: WQLDSPVKHFCTCSI*FKIEDSMTCNSRGI
Trigger: AATACCTCTTGAATTGCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTTAACAGGAGAATCCAACTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAATTTGTTTTCCTCAGTaGATTCCTCCTGTACCCCAT +
Preference number: 2 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIICFPQ*IPPVPH
Trigger: ATGGGGTACAGGAGGAATTCACTGAGGAAAACAAAT...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAAGCCATTTCCACAGCTaGATCCTTGTTTATTTCCCA +
Preference number: 2 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWISHFHS*ILVYFP
Trigger: TGGGAAATAAACAAGGATTCAGCTGTGGAAATGGCT...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTATACTTCTGATGCGCTaGAGAAGTAGAGTCAGTAAC +
Preference number: 2 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFILLMR*RSRVSN
Trigger: GTTACTGACTCTACTTCTTCAGCGCATCAGAAGTAT...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTGAGGACTCCATGACCTaGAATTCAAGAGGTATTTCA +
Preference number: 2 (lower is better)
Translates to: SSHASVRCPPALFYCFFLEDSMT*NSRGIS
Trigger: TGAAATACCTCTTGAATTGCAGGTCATGGAGTCCTC...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTACAAATTTCCATTCCTaGTTCAGTTCTTCGCACCAC +
Preference number: 2 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFTNFHS*FSSSHH
Trigger: GTGGTGCGAAGAACTGAAGCAGGAATGGAAATTTGT...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACTTGTTGTTTTGCAGGTaGTGTTCAAGAATATCTCTG +
Preference number: 2 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHLLFCR*CSRISL
Trigger: CAGAGATATTCTTGAACACCACCTGCAAAACAACAA...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCGCCATCTTTGAAGTGTaGAAGAGAATTAGCCATTTC +
Preference number: 2 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCAIFEV*KRISHF
Trigger: GAAATGGCTAATTCTCTTCCACACTTCAAAGATGGC...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp AACTTTCCTTTCTTTTCTGTTGAGCGTTTTGATTTGAGAATGCTGTaGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTT +
Preference number: 2 (lower is better)
Translates to: NFPFFSVERFDLRML*RQHSISCLADASLF
Trigger: AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCTCAAATCAAAACGCTCAACAGAAAAGAAAGGAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp AGTCTCAAGAGTCTAAGGATCTGTCGTAGTTTCATTAACTCTTCTTaGGTTGATATAAGATTTGACACCAAGGCCTTGCTCTGTTCCAAG +
Preference number: 2 (lower is better)
Translates to: SLKSLRICRSFINSS*VDIRFDTKALLCSK
Trigger: CTTGGAACAGAGCAAGGCCTTGGTGTCAAATCTTATATCAACCAAAGAAGAGTTAATGAAACTACGACAGATCCTTAGACTCTTGAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGACACCACTGCTCATTaGCCATACCTACATTATAAT +
Preference number: 2 (lower is better)
Translates to: RTFWCITGSSKLPADWSKDTTAH*PYLHYN
Trigger: ATTATAATGTAGGTATGGTCAATGAGCAGTGGTGTC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR TCA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTATGTTTGTTAGCTCCTaGAGATGTGTTGAGATTCCA +
Preference number: 2 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFMFVSS*RCVEIP
Trigger: TGGAATCTCAACACATCTTCAGGAGCTAACAAACAT...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp AATAACATGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATTGTGATGGACACCACTaGTCATTGACCATACCTACA +
Preference number: 2 (lower is better)
Translates to: NNMHLFFSFNTVFSMSLNCDGHH*SLTIPT
Trigger: TGTAGGTATGGTCAATGAGCAGTGGTGTCCATCACA...ATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCATGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATGGAATGTCCTCGCTTaGTTCTATAATATATGTGAT +
Preference number: 2 (lower is better)
Translates to: RAELGTEQNILVYNRQLKWNVLA*FYNICD
Trigger: ATCACATATATTATAGAAGCAAGCGAGGACATTCCA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR GCA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCATAATGCTTTCTTCTTaGAGAGGCCTTAACACTGAT +
Preference number: 2 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSIMLSS*RGLNTD
Trigger: ATCAGTGTTAAGGCCTCTGCAAGAAGAAAGCATTAT...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACCTGAATTTGTTGTTTTaGAGGTGGTGTTCAAGAATA +
Preference number: 2 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHLNLLF*RWCSRI
Trigger: TATTCTTGAACACCACCTGCAAAACAACAAATTCAG...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp CAAAGTTGCCTGGCTCTTCTAAGCGGTTACATATTTCAATCTGTTTaGCTATGGAATCTTGGATATTCCTTAGGTGTTGATAGATGCGAT +
Preference number: 2 (lower is better)
Translates to: QSCLALLSGYIFQSV*LWNLGYSLGVDRCD
Trigger: ATCGCATCTATCAACACCTAAGGAATATCCAAGATTCCATAGCAAAACAGATTGAAATATGTAACCGCTTAGAAGAGCCAGGCAACTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp TGCATTGCGTGTAGATCAAATGGGTGTAACTCCTTTAATACAAAGTaGCCTGGCTCTTCTAAGCGGTTACATATTTCAATCTGTTTTGCT +
Preference number: 2 (lower is better)
Translates to: CIACRSNGCNSFNTK*PGSSKRLHISICFA
Trigger: AGCAAAACAGATTGAAATATGTAACCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGGAGTTACACCCATTTGATCTACACGCAATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTGGAATGTCCTCGCTTaGTTCTATAATATATGTGAT +
Preference number: 2 (lower is better)
Translates to: AELGTEQNILVYNRQLKIWNVLA*FYNICD
Trigger: ATCACATATATTATAGAAGCAAGCGAGGACATTCCA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR GCA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTATCATACTGTGTTTTTaGTGTAGAATCTGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCIILCF*CRICCC
Trigger: ACAACAGCAGATTCTACAGCAAAAACACAGTATGAT...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR GCA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTCTTCAAAGTAATAAGTaGCTGAAGCAAATTGTCCAA +
Preference number: 2 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCLQSNK*LKQIVQ
Trigger: TTGGACAATTTGCTTCAGGCACTTATTACTTTGAAG...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp GTCCTCTTCACTAGAGAAATCAGAAGTAATCCTGAATTTGTTGTTTaGCAGGTGGTGTTCAAGAATATCTCTGTATGTATCATACCTCTC +
Preference number: 2 (lower is better)
Translates to: VLFTREIRSNPEFVV*QVVFKNISVCIIPL
Trigger: GAGAGGTATGATACATACAGAGATATTCTTGAACACCACCTGCAAAACAACAAATTCAGGATTACTTCTGATTTCTCTAGTGAAGAGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp CTCCTGTCCTCTTCACTAGAGAAATCAGAAGTAATCCTGAATTTGTaGTTTTGCAGGTGGTGTTCAAGAATATCTCTGTATGTATCATAC +
Preference number: 2 (lower is better)
Translates to: LLSSSLEKSEVILNL*FCRWCSRISLYVSY
Trigger: GTATGATACATACAGAGATATTCTTGAACACCACCTGCAAAACAACAAATTCAGGATTACTTCTGATTTCTCTAGTGAAGAGGACAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp CTACTCCTGTCCTCTTCACTAGAGAAATCAGAAGTAATCCTGAATTaGTTGTTTTGCAGGTGGTGTTCAAGAATATCTCTGTATGTATCA +
Preference number: 2 (lower is better)
Translates to: LLLSSSLEKSEVILN*LFCRWCSRISLYVS
Trigger: TGATACATACAGAGATATTCTTGAACACCACCTGCAAAACAACAAATTCAGGATTACTTCTGATTTCTCTAGTGAAGAGGACAGGAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp TGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACTaGATTCGCAGTTTTTCCATAATATTCTCAAAAGTTAGTTTCCCT +
Preference number: 2 (lower is better)
Translates to: WDSISAGTMVYISEY*IRSFSIIFSKVSFP
Trigger: AGGGAAACTAACTTTTGAGAATATTATGGAAAAACTGCGAATCAAGTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAAATTGCCAGCTGATTaGAGTAAAACTGATTCTAAG +
Preference number: 2 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPKLPAD*SKTDSK
Trigger: CTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAAGATTTTTGCAGACCTaGTTTATCTTGTCTACAACT +
Preference number: 2 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIRFLQT*FILSTT
Trigger: AGTTGTAGACAAGATAAACCAGGTCTGCAAAAATCT...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTACTTGGGTTTGTAATTaGTCAAGTTGTGAAAAATCC +
Preference number: 2 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFTWVCN*SSCEKS
Trigger: GGATTTTTCACAACTTGACCAATTACAAACCCAAGT...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp CTTCCAGAAATAATCTTTCAAACACATTCAGCTCCTCATAGATGTTaGTTAGCTCCTGAAGATGTGTTGAGATTCCACTGTCAATTTCTT +
Preference number: 2 (lower is better)
Translates to: LPEIIFQTHSAPHRC*LAPEDVLRFHCQFL
Trigger: AAGAAATTGACAGTGGAATCTCAACACATCTTCAGGAGCTAACAAACATCTATGAGGAGCTGAATGTGTTTGAAAGATTATTTCTGGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 90 bp ATTATTATTTCTTCTTCTTCAGTAAACCCATATTCCTTCAAAGAGTaGTTCAATTGGGCCACAGATTCAAACTGTTCCCTCTTTCTAGCT +
Preference number: 2 (lower is better)
Translates to: IIISSSSVNPYSFKE*FNWATDSNCSLFLA
Trigger: AGCTAGAAAGAGGGAACAGTTTGAATCTGTGGCCCAATTGAACAACTCTTTGAAGGAATATGGGTTTACTGAAGAAGAAGAAATAATAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAAATTGCCAGCTGATTaGAGTAAAACTGATTCTAAG +
Preference number: 2 (lower is better)
Translates to: KQYKRAELGTEQNILVYNKLPAD*SKTDSK
Trigger: CTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR GCA 72 bp AGGCAGGCCAGGAGCAGCAGCAGCAGGAGGAGCAGCTaGAGGGGTAGGGCTGCCCGGACCACCCTTGAGAGG +
Preference number: 3 (lower is better)
Translates to: RQARSSSSRRSS*RGRAARTTLER
Trigger: CCTCTCAAGGGTGGTCCGGGCAGCCCTACCCCTGCAGCTGCTCCTCCTGCTGCTGCTGCTCCTGGCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR GCA 72 bp GGACCACCCTTGAGAGGAAGGAGCGCTGTGGCCGTGTaGTGCCGGGGACCCTGCTCTCTGTCTCCTCCTCGC +
Preference number: 3 (lower is better)
Translates to: GPPLRGRSAVAV*CRGPCSLSPPR
Trigger: GCGAGGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTCTCAAGGGTGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 72 bp TCTTCCAAGCCCGGAGTGCAGGAGGTGAGCCGCCGGTaGAACCGGGAGACCCTTCCAAACACCTCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: SSKPGVQEVSRR*NRETLPNTSWQ
Trigger: CTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACCTCCTGCACTCCGGGCTTGGAAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 72 bp TTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTaGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: FARGAGTDVAGG*SPESTSSKLGR
Trigger: CCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp AGCTGCAGGGGTAGGGCTGCCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCACACCTCTGAGGAATTaGGGCAGGCTGCCGTCCTCT +
Preference number: 3 (lower is better)
Translates to: SCRGRAARTTLERKERCGTPLRN*GRLPSS
Trigger: AGAGGACGGCAGCCTGCCCAAATTCCTCAGAGGTGT...GCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAGCCCTACCCCTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCCACACTCGGTCTCATTaGCACAGGCATCGGAGTCGT +
Preference number: 3 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSHTRSH*HRHRSR
Trigger: ACGACTCCGATGCCTGTGCAAATGAGACCGAGTGTG...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAACGTGCTGGGCACCCTaGGCAATCAGGCAGGTGGTG +
Preference number: 3 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTTCWAP*AIRQVV
Trigger: CACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CAA 90 bp TGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCATCCGAAATGACGTGCTGGGCACCCTaGGCAATCAGGCAGGTGGTG +
Preference number: 3 (lower is better)
Translates to: CSGQEGLSGTCHEWPSEMTCWAP*AIRQVV
Trigger: CACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGT...CATTTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACTAAGTCACTCAGATaGGTCTGGGGCCACGTGCTG +
Preference number: 3 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGTKSLR*VWGHVL
Trigger: CAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CAA 90 bp GCAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTTTCAGTTGGCGCATCTaGTCATCGGCGTCACTCTCT +
Preference number: 3 (lower is better)
Translates to: AGGWSPESTSSKLGRGEAFSWRI*SSASLS
Trigger: AGAGAGTGACGCCGATGACAAGATGCGCCAACTGAA...AGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 72 bp ACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTaGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGC +
Preference number: 3 (lower is better)
Translates to: TQIGLGPRAGHP*QSGRWCSTVAS
Trigger: GCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CCA 72 bp GGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTaGTGTAGCACTGTGGCCAGCTATGCCCTCTATGTG +
Preference number: 3 (lower is better)
Translates to: GPRAGHPWQSGR*CSTVASYALYV
Trigger: CACATAGAGGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR TCA 72 bp TCTCCCATCTGTCGAAGGCACCTGACTGCTGCTCTGTaGTACCGGCCAGTCCCCCGTCTTCCTGCTGTGGGT +
Preference number: 3 (lower is better)
Translates to: SPICRRHLTAAL*YRPVPRLPAVG
Trigger: ACCCACAGCAGGAAGACGGGGGACTGGCCGGTATCACAGAGCAGCAGTCAGGTGCCTTCGACAGATGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR TCA 72 bp AGGAGAGCCCGGGGGTCTGCCTTTGGATCGGTGACATaGGCCTTCTGCCTCCGGTTCTTGGCACTCGCTAAC +
Preference number: 3 (lower is better)
Translates to: RRARGSAFGSVT*AFCLRFLALAN
Trigger: GTTAGCGAGTGCCAAGAACCGGAGGCAGAAGGCTCATGTCACCGATCCAAAGGCAGACCCCCGGGCTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR TCA 72 bp ACTCTAGGAGAGCCCGGGGGTCTGCCTTTGGATCGGTaGCATGAGCCTTCTGCCTCCGGTTCTTGGCACTCG +
Preference number: 3 (lower is better)
Translates to: TLGEPGGLPLDR*HEPSASGSWHS
Trigger: CGAGTGCCAAGAACCGGAGGCAGAAGGCTCATGTCACCGATCCAAAGGCAGACCCCCGGGCTCTCCTAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR GCA 72 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTaGACAGGTCCCGGGACCTTGCCAACACTAAGTCAC +
Preference number: 3 (lower is better)
Translates to: PGSPCWVSPEEV*TGPGTLPTLSH
Trigger: GTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR GCA 72 bp TCTGAACTGCTTTGCTCGGGGAGCTGGCACGGATGTTaGAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAA +
Preference number: 3 (lower is better)
Translates to: SELLCSGSWHGC*RRLVPRVYLVE
Trigger: TTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCAGTTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 72 bp GGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTaGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATC +
Preference number: 3 (lower is better)
Translates to: GPGTLPTLSHSD*SGATCWAPLAI
Trigger: GATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CCA 72 bp AGTTCTCACTGCTCTGAACTGCTTTGCTCGGGGAGCTaGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTC +
Preference number: 3 (lower is better)
Translates to: SSHCSELLCSGS*HGCCRRLVPRV
Trigger: GACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 72 bp GGTGGTGTAGCACTGTGGCCAGCTATGCCCTCTATGTaGGGGGTGGCCCATTGGTGTACCTCAGCATGGGGT +
Preference number: 3 (lower is better)
Translates to: GGVALWPAMPSM*GVAHWCTSAWG
Trigger: ACCCCATGCTGAGGTACACCAATGGGCCACCCCCCACATAGAGGGCATAGCTGGCCACAGTGCTACACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp TGCATGAGCGACTGTCGTAAGCCCCCTCTCCAGCTGTCCACTGCGCCCTGTGCTACAGGTCCCGGGACCTaGCCAACACTAAGTCACTCA +
Preference number: 3 (lower is better)
Translates to: CMSDCRKPPLQLSTAPCATGPGT*PTLSHS
Trigger: TGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGT...AGCACAGGGCGCAGTGGACAGCTGGAGAGGGGGCTTACGACAGTCGCTCATGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp AGCTGGCGGAGTCTACTTTGGAGCTCTGTGGATTCGGGGCTCTCGGTTTGCAGAACTCGCGGGCCTTCTTaGCCACCATCCGTGCCTGGA +
Preference number: 3 (lower is better)
Translates to: SWRSLLWSSVDSGLSVCRTRGPS*PPSVPG
Trigger: TCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGT...TCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp CCTTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGACTCGCGGGCCTTCTTaGCCACCATCCGTGCCTGGA +
Preference number: 3 (lower is better)
Translates to: PFPVALVPSDTLGEPGGLTRGPS*PPSVPG
Trigger: TCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGT...CAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 72 bp CGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTaGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCA +
Preference number: 3 (lower is better)
Translates to: RDLANTKSLRLV*GHVLGTLGNQA
Trigger: TGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CCA 72 bp GCTTCCCAGAGCAGGCTCAGCTGGCGGAGTCTACTTTaGAGCTCTGTGGATTCGGGGCTCTCGGTTTGCAGA +
Preference number: 3 (lower is better)
Translates to: ASQSRLSWRSLL*SSVDSGLSVCR
Trigger: TCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAGCTGAGCCTGCTCTGGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCCTGTCACCTTCCATTaGCTTGTAGTGATGCTCGGG +
Preference number: 3 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCPVTFH*LVVMLG
Trigger: CCCGAGCATCACTACAAGCAAATGGAAGGTGACAGG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTCCTTGCTGCTCACGTaGACAGAGACCACTAATGCC +
Preference number: 3 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCSLLLT*TETTNA
Trigger: GGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGGA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 72 bp TCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTaGCCATCCGAAATGGATTTACCTGACAGTGCGCTG +
Preference number: 3 (lower is better)
Translates to: SGQEGLSGTCHE*PSEMDLPDSAL
Trigger: CAGCGCACTGTCAGGTAAATCCATTTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTACCGGCAGCTCAAAATaGCCAGCTGATTGGAGTAAA +
Preference number: 3 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCTGSSK*PADWSK
Trigger: TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR GCA 72 bp GCTGTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTaGCACCATCCGTGCCTGGAGGTAATAGTAGCTTTC +
Preference number: 3 (lower is better)
Translates to: AVGCHSGLAGLL*HHPCLEVIVAF
Trigger: GAAAGCTACTATTACCTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 72 bp GCAGGCTCAGCTGGCGGAGTCTACTTTGGAGCTCTGTaGATTCGGGGCTCTCGGTTTGCAGAAATTCCTTGC +
Preference number: 3 (lower is better)
Translates to: AGSAGGVYFGAL*IRGSRFAEIPC
Trigger: GCAAGGAATTTCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAGCTGAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGAATTCACAAAGTGCTaGGCTCTTCAGGAAACTGAC +
Preference number: 3 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGEFTKC*ALQETD
Trigger: GTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTACTGAACAGAACATTTaGGTGTATAACCGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGTEQNI*VYNRQL
Trigger: GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CAA 90 bp CCTTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGTTCGGGGCTCTCGGTTaGCAGAAATTCCTTGCTGCT +
Preference number: 3 (lower is better)
Translates to: PFPVALVPSDTLGEPGGLFGALG*QKFLAA
Trigger: AGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGAA...CAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 72 bp AAGAGGGATTCAGTCATCCCGATCTGGGTCTTGGCTTaGTCGAGATCCTCCCTTAGCTCAGCAGTGCTGCCA +
Preference number: 3 (lower is better)
Translates to: KRDSVIPIWVLA*SRSSLSSAVLP
Trigger: TGGCAGCACTGCTGAGCTAAGGGAGGATCTCGACCAAGCCAAGACCCAGATCGGGATGACTGAATCCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATTGGAAGCCATTCAGTaGGCGCATCTTGTCATCGGC +
Preference number: 3 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSLEAIQ*AHLVIG
Trigger: GCCGATGACAAGATGCGCCAACTGAATGGCTTCCAA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR TCA 72 bp ATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCTCTaGGAAGTGCTCCACGTTGGTCAGCTGCAGGTCCAT +
Preference number: 3 (lower is better)
Translates to: IQLAHLVIGVTL*EVLHVGQLQVH
Trigger: ATGGACCTGCAGCTGACCAACGTGGAGCACTTCTCAGAGAGTGACGCCGATGACAAGATGCGCCAACTGAAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR TCA 72 bp CGGTTCTTGGCACTCGCTAACCACAGCAGCAGATTTTaGCTCAACTGGTGGAAGTCCTGGCACTGCATGAGC +
Preference number: 3 (lower is better)
Translates to: RFLALANHSSRF*LNWWKSWHCMS
Trigger: GCTCATGCAGTGCCAGGACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTGGTTAGCGAGTGCCAAGAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553289.5
3UTR TCA 72 bp GGTCGAGATCCTCCCTTAGCTCAGCAGTGCTGCCACTaGGTGCATGGCAGTTGGATTCTCCTGTTAAGCACT +
Preference number: 3 (lower is better)
Translates to: GRDPPLAQQCCH*VHGSWILLLST
Trigger: AGTGCTTAACAGGAGAATCCAACTGCCATGCACTCAGTGGCAGCACTGCTGAGCTAAGGGAGGATCTCGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 72 bp CATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTaGCTGGAGGTAATAGTAGCTTTCCATAGGGTGGTT +
Preference number: 3 (lower is better)
Translates to: HSGLAGLLCHHP*LEVIVAFHRVV
Trigger: AACCACCCTATGGAAAGCTACTATTACCTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 72 bp GTAGCCTGGAGGTCAGTGGTCAAGGCAATCATGCTTTaGTTCCCTGCCCGTTCTTCTGGAGACTTCAGCCTT +
Preference number: 3 (lower is better)
Translates to: VAWRSVVKAIML*FPARSSGDFSL
Trigger: AAGGCTGAAGTCTCCAGAAGAACGGGCAGGGAACCAAAGCATGATTGCCTTGACCACTGACCTCCAGGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp CCTTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGACCGGCAGCTCAAAATaGCCAGCTGATTGGAGTAAA +
Preference number: 3 (lower is better)
Translates to: PFPVALVPSDTLGEPGGLTGSSK*PADWSK
Trigger: TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGT...CAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp TCGCCTTCTGTAGTTCTCACTGCTCTGAACTGCTTTGCTCGGGGAGCTGGCACGACCGGCAGCTCAAAATaGCCAGCTGATTGGAGTAAA +
Preference number: 3 (lower is better)
Translates to: SPSVVLTALNCFARGAGTTGSSK*PADWSK
Trigger: TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGT...CGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAAGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR GCA 72 bp TCACACTCGGTCTCATTTGCACAGGCATCGGAGTCGTaGAGTAGGACGTCACAGATGTTAAACACGGACTCC +
Preference number: 3 (lower is better)
Translates to: SHSVSFAQASES*SRTSQMLNTDS
Trigger: GGAGTCCGTGTTTAACATCTGTGACGTCCTACTGCACGACTCCGATGCCTGTGCAAATGAGACCGAGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 72 bp GCCGCTGAAAGGCCTCAAACCTCTTCAGTTCCTCTTTaGCACTCGTGTACAACACCTCTGAGGAATTTGGGC +
Preference number: 3 (lower is better)
Translates to: AAERPQTSSVPL*HSCTTPLRNLG
Trigger: GCCCAAATTCCTCAGAGGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGAGGTTTGAGGCCTTTCAGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CCA 72 bp CTTTTAAGAGGGATTCAGTCATCCCGATCTGGGTCTTaGCTTGGTCGAGATCCTCCCTTAGCTCAGCAGTGC +
Preference number: 3 (lower is better)
Translates to: LLRGIQSSRSGS*LGRDPPLAQQC
Trigger: GCACTGCTGAGCTAAGGGAGGATCTCGACCAAGCCAAGACCCAGATCGGGATGACTGAATCCCTCTTAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 72 bp GACAGGGCTTTTAAGAGGGATTCAGTCATCCCGATCTaGGTCTTGGCTTGGTCGAGATCCTCCCTTAGCTCA +
Preference number: 3 (lower is better)
Translates to: DRAFKRDSVIPI*VLAWSRSSLSS
Trigger: TGAGCTAAGGGAGGATCTCGACCAAGCCAAGACCCAGATCGGGATGACTGAATCCCTCTTAAAAGCCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGCCGAATTCACAAAGTGCTaGGCTCTTCAGGAAACTGAC +
Preference number: 3 (lower is better)
Translates to: FSSCISSLRHSRRARGSAEFTKC*ALQETD
Trigger: GTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTC...GGCAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp TGCAGTCTCTTCACTCTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCCACACTCGGTCTCATTaGCACAGGCATCGGAGTCGT +
Preference number: 3 (lower is better)
Translates to: CSLFTLSSISWISEGGFAHTRSH*HRHRSR
Trigger: ACGACTCCGATGCCTGTGCAAATGAGACCGAGTGTG...GGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAGAGTGAAGAGACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR TCA 72 bp CAGTCTTCCTCCAACTTTTCCACTGCAGCTGATTCCTaGGTAGACTCCTGCACATCAGAAGTGGCCTGCTTC +
Preference number: 3 (lower is better)
Translates to: QSSSNFSTAADS*VDSCTSEVACF
Trigger: GAAGCAGGCCACTTCTGATGTGCAGGAGTCTACTCAGGAATCAGCTGCAGTGGAAAAGTTGGAGGAAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCACAGGTCCCGGGACCTaGCCAACACTAAGTCACTCA +
Preference number: 3 (lower is better)
Translates to: LGWNVLACFYNICDGHHCTGPGT*PTLSHS
Trigger: TGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CAA 90 bp TCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCTCTGAGGAATTCACAAAGTGCTaGGCTCTTCAGGAAACTGAC +
Preference number: 3 (lower is better)
Translates to: SCWKPFSWRILSSASLSEEFTKC*ALQETD
Trigger: GTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTC...CTCAGAGAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATTGTCCCAGCGCTGGTaGCCCTCGTGGACCATCTGC +
Preference number: 3 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPLSQRW*PSWTIC
Trigger: GCAGATGGTCCACGAGGGCAACCAGCGCTGGGACAA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp CTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCATCTTTAACATTTCCTCTTCCTGCTGTGGGTaGCCATTCAGGACTCGCGGG +
Preference number: 3 (lower is better)
Translates to: LSSISWISEGGFAIFNISSSCCG*PFRTRG
Trigger: CCCGCGAGTCCTGAATGGCAACCCACAGCAGGAAGA...GGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTATCCCGATCTGGGTCTaGGCTTGGTCGAGATCCTCC +
Preference number: 3 (lower is better)
Translates to: RMLLRQHSISCLADASLFIPIWV*AWSRSS
Trigger: GGAGGATCTCGACCAAGCCAAGACCCAGATCGGGAT...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 72 bp TGGCTTCGGGGCTGGATATCATTCCCAGTTTCTCAGTaGGGTCCTGGATGTGTGCTACTGTGGATTCCAATT +
Preference number: 3 (lower is better)
Translates to: WLRGWISFPVSQ*GPGCVLLWIPI
Trigger: AATTGGAATCCACAGTAGCACACATCCAGGACCTCACTGAGAAACTGGGAATGATATCCAGCCCCGAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 72 bp GCTGGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTaGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTC +
Preference number: 3 (lower is better)
Translates to: AGFWVPCKAIKS*DTCSRNCLSFF
Trigger: GAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp GGCTGTTTGAAATCTCCTGTAACATGTCCACTTGAGGTTGACGTTCTACCAGCTTTCAGTTGGCGCATCTaGTCATCGGCGTCACTCTCT +
Preference number: 3 (lower is better)
Translates to: GCLKSPVTCPLEVDVLPAFSWRI*SSASLS
Trigger: AGAGAGTGACGCCGATGACAAGATGCGCCAACTGAA...AGCTGGTAGAACGTCAACCTCAAGTGGACATGTTACAGGAGATTTCAAACAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp GGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACTATCAGAGGGAGGCTTaGCCATCTTTAACATTTCCA +
Preference number: 3 (lower is better)
Translates to: GFWVPCKAIKSWDTCSRNYQREA*PSLTFP
Trigger: TGGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATA...GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGCAAAACTCTCCCACATaGTTCAAGACATTCGGTGAC +
Preference number: 3 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKEQNSPT*FKTFGD
Trigger: GTCACCGAATGTCTTGAACAATGTGGGAGAGTTTTG...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACAGTCTTCAAGCTCCTTaGCTCGAGCCTGGCATATGG +
Preference number: 3 (lower is better)
Translates to: SSTWDSISAGTMVYISEYSLQAP*LEPGIW
Trigger: CCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACT...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATGTTATCCATCCATTCTaGAGCCTGTCCTGGGTCCTG +
Preference number: 3 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYVIHPF*SLSWVL
Trigger: CAGGACCCAGGACAGGCTCAAGAATGGATGGATAAC...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 72 bp TCTTTGACCTCTTCAGCCAACGATTCCACAGACTGCTaGCTAGCTAGAATGCCATCATGTGTCACTTTGCAC +
Preference number: 3 (lower is better)
Translates to: SLTSSANDSTDC*LARMPSCVTLH
Trigger: GTGCAAAGTGACACATGATGGCATTCTAGCTAGGCAGCAGTCTGTGGAATCGTTGGCTGAAGAGGTCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 72 bp GGGCTGGATATCATTCCCAGTTTCTCAGTGAGGTCCTaGATGTGTGCTACTGTGGATTCCAATTCCTCTTGT +
Preference number: 3 (lower is better)
Translates to: GLDIIPSFSVRS*MCATVDSNSSC
Trigger: ACAAGAGGAATTGGAATCCACAGTAGCACACATCCAGGACCTCACTGAGAAACTGGGAATGATATCCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTACAGGTCCCGGGACCTaGCCAACACTAAGTCACTCA +
Preference number: 3 (lower is better)
Translates to: WCITGSSKLPADWSKTDSTGPGT*PTLSHS
Trigger: TGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CAA 90 bp TGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATGAGAAGGACAGGTCCCGGGACCTaGCCAACACTAAGTCACTCA +
Preference number: 3 (lower is better)
Translates to: CTFSSASIQSSPCPLMRRTGPGT*PTLSHS
Trigger: TGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGT...CCTTCTCATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACTGGCGGAGTCTACTTaGGAGCTCTGTGGATTCGGG +
Preference number: 3 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPLAEST*ELCGFG
Trigger: CCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATGTGTTGTCCCACTGGTaGCTGATGTCAGTGAGGGTC +
Preference number: 3 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYVLSHW*LMSVRV
Trigger: GACCCTCACTGACATCAGCAACCAGTGGGACAACAC...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTAAGTCACTCAGATaGGTCTGGGGCCACGTGCTG +
Preference number: 3 (lower is better)
Translates to: RTFWCITGSSKLPADWSKTKSLR*VWGHVL
Trigger: CAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCTCTTCAGTTCCTCTTaGGCACTCGTGTACAACACC +
Preference number: 3 (lower is better)
Translates to: KRAELGTEQNILVYNRQLLFSSS*ALVYNT
Trigger: GGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGAG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp GGCTGTTTGAAATCTCCTGTAACATGTCCACTTGAGGTTGACGTTCTACCAGCTGTTTGCAGAAATTCCTaGCTGCTCACGTTGACAGAG +
Preference number: 3 (lower is better)
Translates to: GCLKSPVTCPLEVDVLPAVCRNS*LLTLTE
Trigger: CTCTGTCAACGTGAGCAGCAAGGAATTTCTGCAAAC...AGCTGGTAGAACGTCAACCTCAAGTGGACATGTTACAGGAGATTTCAAACAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACGCTAAATGGAGTGTGTaGTCCCACTGGTTGCTGATG +
Preference number: 3 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHAKWSV*SHWLLM
Trigger: CATCAGCAACCAGTGGGACAACACACTCCATTTAGC...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCCAAACTCACGTAGTTTaGTCTCCACATCACTCGCTT +
Preference number: 3 (lower is better)
Translates to: CKTVATRTWTVQELSPFCQTHVV*SPHHSL
Trigger: AAGCGAGTGATGTGGAGACAAAACTACGTGAGTTTG...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 72 bp GTGACGCAAACCTGGTATGAATCATGTTCTCGAACGTaGCCGTCCAAGTTTTGCACAGAATCCTGCAGTTGT +
Preference number: 3 (lower is better)
Translates to: VTQTWYESCSRT*PSKFCTESCSC
Trigger: ACAACTGCAGGATTCTGTGCAAAACTTGGACGGTCACGTTCGAGAACATGATTCATACCAGGTTTGCGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 72 bp CAGCCCCTGAGCTTTCAGGAACATTCTGGATACTTCTaGTGCGCTGAAGAAGTAGAGTCAGTAACAGCTGTT +
Preference number: 3 (lower is better)
Translates to: QPLSFQEHSGYF*CAEEVESVTAV
Trigger: AACAGCTGTTACTGACTCTACTTCTTCAGCGCATCAGAAGTATCCAGAATGTTCCTGAAAGCTCAGGGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 72 bp CGTTCTTCTGGAGACTTCAGCCTTAACTGTAGATGTTaGTGCTGCTGTTGCAGAGAAATCTCAGTGTCCTGT +
Preference number: 3 (lower is better)
Translates to: RSSGDFSLNCRC*CCCCREISVSC
Trigger: ACAGGACACTGAGATTTCTCTGCAACAGCAGCAGCAACATCTACAGTTAAGGCTGAAGTCTCCAGAAGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTTCGGTGACCAAGGCTTaGGTATTCTCCCACAAGACT +
Preference number: 3 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCSVTKA*VFSHKT
Trigger: AGTCTTGTGGGAGAATACCAAAGCCTTGGTCACCGA...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp AGAGAGTTCCTCTGTGGTGGCTGCCTCTTTTGTTTTGGAAATTTCAGGGAGTTCCACAGAATCCTGCAGTaGTTGAAGAAGACTTTCGTG +
Preference number: 3 (lower is better)
Translates to: REFLCGGCLFCFGNFREFHRILQ*LKKTFV
Trigger: CACGAAAGTCTTCTTCAACAACTGCAGGATTCTGTG...GAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCGATTTGAGAATGCTGTaGAGACAACATTCCATCTCC +
Preference number: 3 (lower is better)
Translates to: CKTVATRTWTVQELSPFCDLRML*RQHSIS
Trigger: GGAGATGGAATGTTGTCTCAACAGCATTCTCAAATC...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCTCACCCAACAAATTCTaGGCCCATAAGATAGTCTCT +
Preference number: 3 (lower is better)
Translates to: CKTVATRTWTVQELSPFCSPNKF*AHKIVS
Trigger: AGAGACTATCTTATGGGCCAAGAATTTGTTGGGTGA...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACTGGTGGCTGCCTCTTTaGTTTTGGAAATTTCAGGGA +
Preference number: 3 (lower is better)
Translates to: SSTWDSISAGTMVYISEYWWLPL*FWKFQG
Trigger: TCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCA...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 72 bp TGGCTTTCTCAATTCTCTGACTTAAAATTTGGGCATTaGGCCGTCTGCTTTCCGGAGAGCTATCAGGAGCTT +
Preference number: 3 (lower is better)
Translates to: WLSQFSDLKFGH*AVCFPESYQEL
Trigger: AAGCTCCTGATAGCTCTCCGGAAAGCAGACGGCTCAATGCCCAAATTTTAAGTCAGAGAATTGAGAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 72 bp TCTGGAGACTTCAGCCTTAACTGTAGATGTTGCTGCTaGTGTTGCAGAGAAATCTCAGTGTCCTGTACCTTA +
Preference number: 3 (lower is better)
Translates to: SGDFSLNCRCCC*CCREISVSCTL
Trigger: TAAGGTACAGGACACTGAGATTTCTCTGCAACAGCAGCAGCAACATCTACAGTTAAGGCTGAAGTCTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 72 bp TTATCTTTGACCTCTTCAGCCAACGATTCCACAGACTaGTGCCTAGCTAGAATGCCATCATGTGTCACTTTG +
Preference number: 3 (lower is better)
Translates to: LSLTSSANDSTD*CLARMPSCVTL
Trigger: CAAAGTGACACATGATGGCATTCTAGCTAGGCAGCAGTCTGTGGAATCGTTGGCTGAAGAGGTCAAAGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 72 bp ACAGATTCAAACTGTTCCCTCTTTCTAGCTAAAGCTTaGCAGAACAGCTCAGTTTTCTCCCCTGGTTCTTCC +
Preference number: 3 (lower is better)
Translates to: TDSNCSLFLAKA*QNSSVFSPGSS
Trigger: GGAAGAACCAGGGGAGAAAACTGAGCTGTTCTGCCAAGCTTTAGCTAGAAAGAGGGAACAGTTTGAATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAACCTGAATTTGTTGTTTaGCAGGTGGTGTTCAAGAAT +
Preference number: 3 (lower is better)
Translates to: LPWQLSPPWELSVFHFLEPEFVV*QVVFKN
Trigger: ATTCTTGAACACCACCTGCAAAACAACAAATTCAGG...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp CTTTCGTGTAGATGCTTTATTTCCAGCCAAGGCTCTTCACTGAAGCTGGGATTTTCCTTTAATACAAAGTaGCCTGGCTCTTCTAAGCGG +
Preference number: 3 (lower is better)
Translates to: LSCRCFISSQGSSLKLGFSFNTK*PGSSKR
Trigger: CCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGGA...AAATCCCAGCTTCAGTGAAGAGCCTTGGCTGGAAATAAAGCATCTACACGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACCAAGACTACTGTATTTaGGCACTGTTGATTCACGGT +
Preference number: 3 (lower is better)
Translates to: SSTWDSISAGTMVYISEYQDYCI*ALLIHG
Trigger: ACCGTGAATCAACAGTGCCAAAATACAGTAGTCTTG...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATACTGAGTGCATGGCAGTaGGATTCTCCTGTTAAGCAC +
Preference number: 3 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWILSAWQ*DSPVKH
Trigger: GTGCTTAACAGGAGAATCCAACTGCCATGCACTCAG...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAACAAGGATGTCAAATCTaGGGCTTTCTTGAGGAATTT +
Preference number: 3 (lower is better)
Translates to: LPWQLSPPWELSVFHFLEQGCQI*GFLEEF
Trigger: AAATTCCTCAAGAAAGCCCAAGATTTGACATCCTTG...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACCCAACCATGTTCAAGTaGCTTAATCTGGCTTTCCAA +
Preference number: 3 (lower is better)
Translates to: SSTWDSISAGTMVYISEYPTMFK*LNLAFQ
Trigger: TTGGAAAGCCAGATTAAGCAACTTGAACATGGTTGG...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCTTAAGTAATAGTTCATaGCGCTGTATACTGTCAGCC +
Preference number: 3 (lower is better)
Translates to: CKTVATRTWTVQELSPFCLSNSS*RCILSA
Trigger: GGCTGACAGTATACAGCGCAATGAACTATTACTTAA...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 72 bp CAATGTAGTATTCAGGTCTGTGACGCAAACCTGGTATaGATCATGTTCTCGAACGTGACCGTCCAAGTTTTG +
Preference number: 3 (lower is better)
Translates to: QCSIQVCDANLV*IMFSNVTVQVL
Trigger: CAAAACTTGGACGGTCACGTTCGAGAACATGATTCATACCAGGTTTGCGTCACAGACCTGAATACTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 72 bp TGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTaGTCCCGTAACTGTTTGAGTTTCTTCTCAATAACA +
Preference number: 3 (lower is better)
Translates to: WVPCKAIKSWDT*SRNCLSFFSIT
Trigger: TGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR GCA 72 bp GACTTCAGCCTTAACTGTAGATGTTGCTGCTGCTGTTaGAGAGAAATCTCAGTGTCCTGTACCTTATTCATG +
Preference number: 3 (lower is better)
Translates to: DFSLNCRCCCCC*REISVSCTLFM
Trigger: CATGAATAAGGTACAGGACACTGAGATTTCTCTGCAACAGCAGCAGCAACATCTACAGTTAAGGCTGAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 72 bp TATCATTCCCAGTTTCTCAGTGAGGTCCTGGATGTGTaGTACTGTGGATTCCAATTCCTCTTGTTTTCGAAG +
Preference number: 3 (lower is better)
Translates to: YHSQFLSEVLDV*YCGFQFLLFSK
Trigger: CTTCGAAAACAAGAGGAATTGGAATCCACAGTAGCACACATCCAGGACCTCACTGAGAAACTGGGAATGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 72 bp ATAAACAGTCTAGCAGCTCAGAGAGTTCCTCTGTGGTaGCTGCCTCTTTTGTTTTGGAAATTTCAGGGAGTT +
Preference number: 3 (lower is better)
Translates to: INSLAAQRVPLW*LPLLFWKFQGV
Trigger: AACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCTGAGCTGCTAGACTGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 72 bp AAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTaGTATTTTCTATCCAAGCCTCAGTGCTCTTCAGAA +
Preference number: 3 (lower is better)
Translates to: KSHSQQDWPAND*YFLSKPQCSSE
Trigger: TTCTGAAGAGCACTGAGGCTTGGATAGAAAATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACACTAAGTCACTCAGATaGGTCTGGGGCCACGTGCTG +
Preference number: 3 (lower is better)
Translates to: KQYKRAELGTEQNILVYNTKSLR*VWGHVL
Trigger: CAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR-3UTR CAA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAAATAGTCTCTTTCATCTaGTTCCTTATGTCACACTTC +
Preference number: 3 (lower is better)
Translates to: LPWQLSPPWELSVFHFLEIVSFI*FLMSHF
Trigger: GAAGTGTGACATAAGGAACAAGATGAAAGAGACTAT...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTGCTCCTCATAGATGTTaGTTAGCTCCTGAAGATGTG +
Preference number: 3 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCAPHRC*LAPEDV
Trigger: CACATCTTCAGGAGCTAACAAACATCTATGAGGAGC...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 72 bp GTTTCTGAACCATTTCTAGGGTGGAATGTCCTCGCTTaGTTCTATAATATATGTGATGGACACCACTGCTCA +
Preference number: 3 (lower is better)
Translates to: VSEPFLGWNVLA*FYNICDGHHCS
Trigger: TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTCAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CCA 72 bp ATCTCCTGCAGTCTCTTCACTCTCAGTTCTATTTCCTaGATATCAGAGGGAGGCTTTGCCATCTTTAACATT +
Preference number: 3 (lower is better)
Translates to: ISCSLFTLSSIS*ISEGGFAIFNI
Trigger: AATGTTAAAGATGGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAGAGTGAAGAGACTGCAGGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR-3UTR CAA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATTCCATTGCTGTAGCTTaGGTTAGTTGCATTCTCCTT +
Preference number: 3 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYSIAVA*VSCILL
Trigger: AAGGAGAATGCAACTAACCAAAGCTACAGCAATGGA...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACTGTACATGTTCCATCTaGTTCAAAATAGAGGACTCC +
Preference number: 3 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHCTCSI*FKIEDS
Trigger: GGAGTCCTCTATTTTGAACAAGATGGAACATGTACA...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATAGGTTCACTTTAATGTaGCTGAACCAGTCATTAAAG +
Preference number: 3 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYRFTLM*LNQSLK
Trigger: CTTTAATGACTGGTTCAGCAACATTAAAGTGAACCT...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATTCCTCAAGTGGCATTTaGCCTTCGGATGAATTCAAA +
Preference number: 3 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYSSSGI*PSDEFK
Trigger: TTTGAATTCATCCGAAGGCAAAATGCCACTTGAGGA...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 72 bp TATTCCTTAGGTGTTGATAGATGCGATCAGCATCAATaGGATGAAATCCCTGGATGGCCATTTTATGGAGAG +
Preference number: 3 (lower is better)
Translates to: YSLGVDRCDQHQ*DEIPGWPFYGE
Trigger: CTCTCCATAAAATGGCCATCCAGGGATTTCATCTCATTGATGCTGATCGCATCTATCAACACCTAAGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 72 bp GCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATaGAAGCCTGTTTTCCAAATCTTTTTGTTTACACTG +
Preference number: 3 (lower is better)
Translates to: AVETTFHLLLSR*KPVFQIFLFTL
Trigger: CAGTGTAAACAAAAAGATTTGGAAAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 72 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTaGCTTCGGGGCTGGATATCATTCCCAGTTTCTCAG +
Preference number: 3 (lower is better)
Translates to: KLVPVKYTEVVV*LRGWISFPVSQ
Trigger: CTGAGAAACTGGGAATGATATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATCAAGCCTCTAGTAATTaGTTTTCCTCAGTGAATTCC +
Preference number: 3 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYQASSN*FSSVNS
Trigger: GGAATTCACTGAGGAAAACAAATTACTAGAGGCTTG...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAGTAATCCTGAATTTGTaGTTTTGCAGGTGGTGTTCA +
Preference number: 3 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIVILNL*FCRWCS
Trigger: TGAACACCACCTGCAAAACAACAAATTCAGGATTAC...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAGAAGTAATCCTGAATTaGTTGTTTTGCAGGTGGTGT +
Preference number: 3 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIEVILN*LFCRWC
Trigger: ACACCACCTGCAAAACAACAAATTCAGGATTACTTC...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 72 bp GCTGAGTTCTTAGAAACTAGTTCCTGTAAAGTATACTaGAGTTGTAGTTTGGCTTCGGGGCTGGATATCATT +
Preference number: 3 (lower is better)
Translates to: AEFLETSSCKVY*SCSLASGLDII
Trigger: AATGATATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTTCTAAGAACTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 72 bp TGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACATaGACCTTTTCTTCAGCTTCAATACAGTCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: CSRNCLSFFSIT*TFSSASIQSSP
Trigger: TGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCATGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR GCA 72 bp GATTTGAGAATGCTGTTGAGACAACATTCCATCTCCTaGTTAGCAGATGCAAGCCTGTTTTCCAAATCTTTT +
Preference number: 3 (lower is better)
Translates to: DLRMLLRQHSIS*LADASLFSKSF
Trigger: AAAAGATTTGGAAAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCTCAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 72 bp TCAGTAAACCCATATTCCTTCAAAGAGTTGTTCAATTaGGCCACAGATTCAAACTGTTCCCTCTTTCTAGCT +
Preference number: 3 (lower is better)
Translates to: SVNPYSFKELFN*ATDSNCSLFLA
Trigger: AGCTAGAAAGAGGGAACAGTTTGAATCTGTGGCCCAATTGAACAACTCTTTGAAGGAATATGGGTTTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 72 bp AAATTGTCCAAATGCTGTGCCGAATATCCTATATTGTaGAGAACCAAGGCCCCAGTTTCTGTTTTGTTAAGA +
Preference number: 3 (lower is better)
Translates to: KLSKCCAEYPIL*RTKAPVSVLLR
Trigger: TCTTAACAAAACAGAAACTGGGGCCTTGGTTCTCCACAATATAGGATATTCGGCACAGCATTTGGACAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 72 bp CAATGTCCTGAACTTCAGAATCCAGCTCATTTAGTTTaGAATGCCATAGATCTAACTCGTCCCACATTTTCT +
Preference number: 3 (lower is better)
Translates to: QCPELQNPAHLV*NAIDLTRPTFS
Trigger: AGAAAATGTGGGACGAGTTAGATCTATGGCATTCCAAACTAAATGAGCTGGATTCTGAAGTTCAGGACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTAATCAGTCTTTTGCATaGTGTAAGTGGAAATTCTCC +
Preference number: 3 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFNQSFA*CKWKFS
Trigger: GGAGAATTTCCACTTACACAATGCAAAAGACTGATT...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR-3UTR CAA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTAGGTATTTCACTGCTTaGGAGCAAAAACTGTATTTC +
Preference number: 3 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFRYFTA*EQKLYF
Trigger: GAAATACAGTTTTTGCTCCAAAGCAGTGAAATACCT...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR GCA 72 bp GTAGATCAAATGGGTGTAACTCCTTTAATACAAAGTTaGCTGGCTCTTCTAAGCGGTTACATATTTCAATCT +
Preference number: 3 (lower is better)
Translates to: VDQMGVTPLIQS*LALLSGYIFQS
Trigger: AGATTGAAATATGTAACCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGGAGTTACACCCATTTGATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 72 bp TCTTCCTCGATTTCACTTAGTTGTCTCAGTAATGTCTaGTATCTATCCATCAAACATGTTGCTTCCATTATT +
Preference number: 3 (lower is better)
Translates to: SSSISLSCLSNV*YLSIKHVASII
Trigger: AATAATGGAAGCAACATGTTTGATGGATAGATACCAGACATTACTGAGACAACTAAGTGAAATCGAGGAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 72 bp TGGAGTAAAACTGATTCTAAGCGTATTAAATATGATTaGTTGTTTCCATCAGCTAAGGGTGCCTATGAGTTT +
Preference number: 3 (lower is better)
Translates to: WSKTDSKRIKYD*LFPSAKGAYEF
Trigger: AAACTCATAGGCACCCTTAGCTGATGGAAACAATCAATCATATTTAATACGCTTAGAATCAGTTTTACTCCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR TCA 72 bp ACTCCTTTAGCAAGGATGTCAAATCTTGGGCTTTCTTaGGGAATTTCTTATAAATCTTTAACTGAGCTTTCT +
Preference number: 3 (lower is better)
Translates to: TPLARMSNLGLS*GISYKSLTELS
Trigger: AGAAAGCTCAGTTAAAGATTTATAAGAAATTCCTCAAGAAAGCCCAAGATTTGACATCCTTGCTAAAGGAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR TCA 72 bp TGCAAATCAATAGCTCTCATTTTACTTAATAATGCCTaGTATTTGCCATGTTCTTCCTCAAATGTGTCCAAC +
Preference number: 3 (lower is better)
Translates to: CKSIALILLNNA*YLPCSSSNVSN
Trigger: GTTGGACACATTTGAGGAAGAACATGGCAAATATCAGGCATTATTAAGTAAAATGAGAGCTATTGATTTGCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CCA 72 bp AAATCAGAAGTAATCCTGAATTTGTTGTTTTGCAGGTaGTGTTCAAGAATATCTCTGTATGTATCATACCTC +
Preference number: 3 (lower is better)
Translates to: KSEVILNLLFCR*CSRISLYVSYL
Trigger: GAGGTATGATACATACAGAGATATTCTTGAACACCACCTGCAAAACAACAAATTCAGGATTACTTCTGATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 72 bp GGAGCAGCTGCAGGGGTAGGGCTGCCCGGACCACCCTaGAGAGGAAGGAGCGCTGTGGCCGTGTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GAAAGVGLPGPP*RGRSAVAVCCR
Trigger: CCGGCAGCACACGGCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAGCCCTACCCCTGCAGCTGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGGCTCTGGGCGCAGCTaGGCGCGCTCCGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWGSGRS*ARSAPW
Trigger: CCAAGGAGCGGAGCGCGCTCAGCTGCGCCCAGAGCC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344113.8
ENST00000358025.7
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCGGAGTGCAGGAGGTaGGCCGCCGGTGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWPECRR*AAGGTG
Trigger: CCCGGTTCCACCGGCGGCTCACCTCCTGCACTCCGG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTCCGGCCGAAGGCTCTaGGCGCAGCTGAGCGCGCTC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSGRRL*AQLSAL
Trigger: GAGCGCGCTCAGCTGCGCCCAGAGCCTTCGGCCGGA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGGCTCTGGGCGCAGCTaGGCGCGCTCCGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGGSGRS*ARSAPW
Trigger: CCAAGGAGCGGAGCGCGCTCAGCTGCGCCCAGAGCC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344113.8
ENST00000358025.7
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGCTGTGGCCGTGTGCTaGCGGGGACCCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGAVAVC*RGPCSL
Trigger: CAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCCCAGTGCCGTGGCCGTaGCCCGAATCCATTGCCGGT +
Preference number: 4 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSPVPWP*PESIAG
Trigger: ACCGGCAATGGATTCGGGCCACGGCCACGGCACTGG...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGAGGAAGGAGCGCTGTaGCCGTGTGCTGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGEEGAL*PCAAGD
Trigger: GTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGAGGAAGGAGCGCTGTaGCCGTGTGCTGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTEEGAL*PCAAGD
Trigger: GTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTGGGTGCTGTACCCCATGGGTaGGCTGCTGCTCAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: EAGPPSLPRRSWAGVRLGAVPHG*AAAQRA
Trigger: GGCTCGCTGAGCAGCAGCCCACCCATGGGGTACAGC...ACCCAGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGGCTCTGGGCGCAGCTaGGCGCGCTCCGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWGSGRS*ARSAPW
Trigger: CCAAGGAGCGGAGCGCGCTCAGCTGCGCCCAGAGCC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
CDS-3UTR TCA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCAGCCCTGGCACTGCATaGGCGACTGTCGTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSSPGTA*ATVVSP
Trigger: GGGGCTTACGACAGTCGCTCATGCAGTGCCAGGGCT...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTGCTGGCCGTGTCTGTaGGGTTCTCCCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLACWPCL*GSPGPA
Trigger: GGCTGGCCCGGGAGAACCGCACAGACACGGCCAGCA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCCTCGCGGGCCTTCTTTaGCACCATCCGTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSLAGLL*HHPCLE
Trigger: CTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAG...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAGCGCTGTGGCCGTGTaGTGCCGGGGACCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASAVAV*CRGPCS
Trigger: AGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGCGCCCCGCTTGCCTaGCTCTCTGGATCGCGCCTT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPGAPLA*LSGSRL
Trigger: AAGGCGCGATCCAGAGAGCCAGGCAAGCGGGGCGCC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGCCCGGGAGGAGCATGTaGGTGCTGGACTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: GEPPVEPGDPSKHLLAVAPGRSM*VLDSAG
Trigger: ACCCGCAGAGTCCAGCACCCACATGCTCCTCCCGGG...CGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGAGGTGAGCCGCCGGTaGAACCGGGAGACCCTTCCA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGEVSRR*NRETLP
Trigger: TGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACCTC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCCGTGTACAACACCTCTaGGGAATTTGGGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PGPPLRGRSAVAVCCRGPRVQHL*GIWAGC
Trigger: GCAGCCTGCCCAAATTCCTCAGAGGTGTTGTACACG...GGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGCTGTGACCCGCCTCTaGAGGTTGTCCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPAVTRL*RLSQRW
Trigger: CCAGCGCTGGGACAACCTTCAGAGGCGGGTCACAGC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTCCGCAGGACGGCTGTaGCCCGCCTCTGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSAGRL*PASEGC
Trigger: ACAACCTTCAGAGGCGGGTCACAGCCGTCCTGCGGA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTCCGCAGGACGGCTGTaGCCCGCCTCTGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSAGRL*PASEGC
Trigger: ACAACCTTCAGAGGCGGGTCACAGCCGTCCTGCGGA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTGCCCGGACCACCCTTaGGAGGAAGGAGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWCPDHP*EEGALW
Trigger: CCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCCCTCGTGGACCATCTaGTTCAGCCTGCTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGPSWTI*FSLLAV
Trigger: CACGGCCAGCAGGCTGAAGCAGATGGTCCACGAGGG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGGTGGAAGCTGGCACGGATGTTaGAGGAGGCTGGTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: AAGGTGRPFQTPPGSSGGSWHGC*RRLVPR
Trigger: TCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCT...TCCACCGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCGCTGTGGCCGTGTGCTaGCGGGGACCCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPAVAVC*RGPCSL
Trigger: CAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGC...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCAGCGCTGTGGCCGTGTaGTGCCGGGGACCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSSAVAV*CRGPCS
Trigger: AGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAGCGCTGTGGCCGTGTaGTGCCGGGGACCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSAVAV*CRGPCS
Trigger: AGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTGGTCTGGGGCCACGTaGTGGGCACCCTTGGCAATC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGWSGAT*WAPLAI
Trigger: GATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGGCGCCCCGCTTGCCTaGCTCTCTGGATCGCGCCTT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSGAPLA*LSGSRL
Trigger: AAGGCGCGATCCAGAGAGCCAGGCAAGCGGGGCGCC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCGGAGCATGTGGGTGCTaGACTCTGCGGGTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSGACGC*TLRVVG
Trigger: TCCCACAACCCGCAGAGTCCAGCACCCACATGCTCC...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAGCGCTCCAGTGCCGTaGCCGTGGCCCGAATCCATT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSAPVP*PWPESI
Trigger: AATGGATTCGGGCCACGGCCACGGCACTGGAGCGCT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTCGCTGGTTGCCCTCGTaGACCATCTGCTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AGGWSPESTSSKLGRGEARWLPS*TICFSL
Trigger: CAGGCTGAAGCAGATGGTCCACGAGGGCAACCAGCG...AGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCGAGGAAGGAGCGCTGTaGCCGTGTGCTGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPEEGAL*PCAAGD
Trigger: GTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTC...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCCGTGCTGGGCACCCTTaGCAATCAGGCAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSRAGHP*QSGRWC
Trigger: ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACG...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp AGCTGCAGGGGTAGGGCTGCCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCAGGGGCTCGCTCTTCTaGATCAGCTGCTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SCRGRAARTTLERKERCGRGSLF*ISCSPN
Trigger: GTTTGGGGAGCAGCTGATTCAGAAGAGCGAGCCCCT...GCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAGCCCTACCCCTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCCGGAGTGCAGGAGGTaGGCCGCCGGTGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQPECRR*AAGGTG
Trigger: CCCGGTTCCACCGGCGGCTCACCTCCTGCACTCCGG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCAGGGACTGAGGAGATaGCGGTTCCTCGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGQGLRR*RFLALS
Trigger: GGAGAGAGCGAGGAACCGTCATCTCCTCAGTCCCTG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCTGACTGCTGCTCTGTaGTACCGGCCAGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLALTAAL*YRPVPR
Trigger: ACGGGGGACTGGCCGGTATCACAGAGCAGCAGTCAG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCCTCGTTTTTCGACGTaGCTCCCGCTGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGPRFST*LPLWAA
Trigger: TGCAGCCCACAGCGGGAGGCACGTCGAAAAACGAGG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCGGCCACCTGGGTCTTaGAGGCATGCAGGACTTCTG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGRPPGS*RHAGLL
Trigger: CAGAAGTCCTGCATGCCTGCAAGACCCAGGTGGCCG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGCCACGTTGGCTTGTTaGAGCCACAGCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGATLAC*SHSSSS
Trigger: CGAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGGAGGAGCATGTGGGTaGTGGACTCTGCGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTGGACG*WTLRVV
Trigger: CACAACCCGCAGAGTCCAGCACCCACATGCTCCTCC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTGGGTCGCTGTAGATCCTGCTaGTCAGCGAGCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EAGPPSLPRRSWAGVRLGRCRSC*SASLFW
Trigger: CCAGAAGAGGCTCGCTGAGCAGCAGGATCTACAGCG...ACCCAGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553289.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGCCAGCCGCCGGTACTaGTTGTTGATGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTASRRY*LLMSSS
Trigger: GCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGCCAGCCGCCGGTACTaGTTGTTGATGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGASRRY*LLMSSS
Trigger: GCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCCCTCGTGGACCATCTaGTTCAGCCTGCTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAPSWTI*FSLLAV
Trigger: CACGGCCAGCAGGCTGAAGCAGATGGTCCACGAGGG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTGTCCCAGCGCTGGTTaGCCTCGTGGACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTCPSAG*PRGPSA
Trigger: AGCAGATGGTCCACGAGGGCAACCAGCGCTGGGACA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCTTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTCTCTCGCGGGCCTTCTTTaGCACCATCCGTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CFARGAGTDVAGGWSPESLAGLL*HHPCLE
Trigger: CTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAG...AGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCATGAGCGACTGTCGTAAGCCCCCTCTCCAGCTGTCCACTGCGCCCTGTGCTTGCTGCCGGGGACCCTaGTCTCTGTCTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: CMSDCRKPPLQLSTAPCACCRGP*SLSPPR
Trigger: GCGAGGAGGAGACAGAGAGCAGGGTCCCCGGCAGCA...AGCACAGGGCGCAGTGGACAGCTGGAGAGGGGGCTTACGACAGTCGCTCATGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGCTGTGGCCGTGTGCTaGCGGGGACCCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTAVAVC*RGPCSL
Trigger: CAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCTGTGGCCGTGTGCTaGCGGGGACCCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWAVAVC*RGPCSL
Trigger: CAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAGCGCTGTGGCCGTGTaGTGCCGGGGACCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWSAVAV*CRGPCS
Trigger: AGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACTCCGTGACTGCTCCTaGAGAGCAGGGCCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGLRDCS*RAGPLR
Trigger: GCGGAGCGGCCCTGCTCTGCAGGAGCAGTCACGGAG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCCCGGGAGGAGCATGTaGGTGCTGGACTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGPGRSM*VLDSAG
Trigger: ACCCGCAGAGTCCAGCACCCACATGCTCCTCCCGGG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTCTCTGCCGAACACCCTaGACAGCATTCTGCCACCGA +
Preference number: 4 (lower is better)
Translates to: AGGWSPESTSSKLGRGEALCRTP*TAFCHR
Trigger: TCGGTGGCAGAATGCTGTCCAGGGTGTTCGGCAGAG...AGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGGAAGCCATTCAGTTaGCGCATCTTGTCATCGGCG +
Preference number: 4 (lower is better)
Translates to: PGPPLRGRSAVAVCCRGPWKPFS*RILSSA
Trigger: CGCCGATGACAAGATGCGCCAACTGAATGGCTTCCA...GGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGATGTTGCAGGAGGCTaGTCCCCCGAGTCTACCTCG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTDVAGG*SPESTS
Trigger: CGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTCACTCAGATTGGTCTaGGGCCACGTGCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSLRLV*GHVLGT
Trigger: GGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCCAGGGAGCCCGTGCTaGGTAAGCCCAGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTPGSPC*VSPEEV
Trigger: GACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTGGCTTCGAGGGAAGTaGTGCTCTCCACTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPWLRGK*CSPLPW
Trigger: CCAGGGCAGTGGAGAGCATCACTTCCCTCGAAGCCA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGCTGCAGGGGTAGGGCTGCCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCTGCCGTCCTCTCAGCTaGCTTGAGCCAGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SCRGRAARTTLERKERCGCRPLS*LEPVLK
Trigger: TTTGAGGACTGGCTCAAGTCAGCTGAGAGGACGGCA...GCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAGCCCTACCCCTGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCTGTGACCCGCCTCTaGAGGTTGTCCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWAVTRL*RLSQRW
Trigger: CCAGCGCTGGGACAACCTTCAGAGGCGGGTCACAGC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTCCGCAGGACGGCTGTaGCCCGCCTCTGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSSAGRL*PASEGC
Trigger: ACAACCTTCAGAGGCGGGTCACAGCCGTCCTGCGGA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTCCGCAGGACGGCTGTaGCCCGCCTCTGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCSAGRL*PASEGC
Trigger: ACAACCTTCAGAGGCGGGTCACAGCCGTCCTGCGGA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTGGGTATCGGCGTCACTCTCTaGGAAGTGCTCCACGTTGGT +
Preference number: 4 (lower is better)
Translates to: EAGPPSLPRRSWAGVRLGIGVTL*EVLHVG
Trigger: ACCAACGTGGAGCACTTCTCAGAGAGTGACGCCGAT...ACCCAGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACCGGAGTGCAGGAGGTaGGCCGCCGGTGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSPECRR*AAGGTG
Trigger: CCCGGTTCCACCGGCGGCTCACCTCCTGCACTCCGG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCAGGGACTGAGGAGATaGCGGTTCCTCGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAQGLRR*RFLALS
Trigger: GGAGAGAGCGAGGAACCGTCATCTCCTCAGTCCCTG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCAGTCCTGGCACTGCATaGGCGACTGTCGTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSPGTA*ATVVSP
Trigger: GGGGCTTACGACAGTCGCTCATGCAGTGCCAGGACT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTGGGTTTTGGATCGGTGACATaGGCCTTCTGCCTCCGGTTC +
Preference number: 4 (lower is better)
Translates to: EAGPPSLPRRSWAGVRLGFGSVT*AFCLRF
Trigger: GAACCGGAGGCAGAAGGCTCATGTCACCGATCCAAA...ACCCAGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCTGCCTTTGGATCGGTaGCATGAGCCTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTLPLDR*HEPSAS
Trigger: GGAGGCAGAAGGCTCATGTCACCGATCCAAAGGCAG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCTGCCTTTGGATCGGTaGCATGAGCCTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGLPLDR*HEPSAS
Trigger: GGAGGCAGAAGGCTCATGTCACCGATCCAAAGGCAG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTGCCCGGACCACCCTTaGGAGGAAGGAGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWCPDHP*EEGALW
Trigger: CCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TCCTGCTGTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGTGCCCGGACCACCCTTaGGAGGAAGGAGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SCCGLPFRTRGPSLPPSVCPDHP*EEGALW
Trigger: CCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCA...CACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCACAGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCAGCCCTGGCACTGCATaGGCGACTGTCGTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPSPGTA*ATVVSP
Trigger: GGGGCTTACGACAGTCGCTCATGCAGTGCCAGGGCT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458046.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTGGCACCCTACCAGCTaGTGTTCCAGCACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAWHPTS*CSSTCC
Trigger: GCAGCAGGTGCTGGAACAGCAGCTGGTAGGGTGCCA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAACTGCAGCGCTCCAGTaGCGTGGCCGTGGCCCGAAT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTTAALQ*RGRGPN
Trigger: ATTCGGGCCACGGCCACGGCACTGGAGCGCTGCAGT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAGGCTCCTGGTGGTCTaGTGGATCGAGTCACACTCG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGRLLVV*WIESHS
Trigger: CGAGTGTGACTCGATCCAGCAGACCACCAGGAGCCT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTGTCCCAGCGCTGGTTaGCCTCGTGGACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPCPSAG*PRGPSA
Trigger: AGCAGATGGTCCACGAGGGCAACCAGCGCTGGGACA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTGTCCCAGCGCTGGTTaGCCTCGTGGACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWCPSAG*PRGPSA
Trigger: AGCAGATGGTCCACGAGGGCAACCAGCGCTGGGACA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGGGCTGTCGGGAACATaGCACGAGTGGCCATCCGAA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAGLSGT*HEWPSE
Trigger: TTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAGTCCCCCGTCTTCCTaGTGTGGGTTGCCATTCAGG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSPPSS*CGLPFR
Trigger: CCTGAATGGCAACCCACAGCAGGAAGACGGGGGACT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTCGAAGGCACCTGACTaGTGCTCTGTGATACCGGCC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSKAPD*CSVIPA
Trigger: GGCCGGTATCACAGAGCAGCAGTCAGGTGCCTTCGA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGAGAGCCCGGGGGTCTaGCTTTGGATCGGTGACATG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPESPGV*LWIGDM
Trigger: CATGTCACCGATCCAAAGGCAGACCCCCGGGCTCTC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGAGAGCCCGGGGGTCTaGCTTTGGATCGGTGACATG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAESPGV*LWIGDM
Trigger: CATGTCACCGATCCAAAGGCAGACCCCCGGGCTCTC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTGGCACGGATGTTaGAGGAGGCTGGTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCSWHGC*RRLVPR
Trigger: TCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCATGAGCGACTGTCGTAAGCCCCCTCTCCAGCTGTCCACTGCGCCCTGTGCTAGCTGGCACGGATGTTaGAGGAGGCTGGTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: CMSDCRKPPLQLSTAPCASWHGC*RRLVPR
Trigger: TCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCT...AGCACAGGGCGCAGTGGACAGCTGGAGAGGGGGCTTACGACAGTCGCTCATGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATGCTGCCGGGGACCCTaGTCTCTGTCTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTCCRGP*SLSPPR
Trigger: GCGAGGAGGAGACAGAGAGCAGGGTCCCCGGCAGCA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATGCTGCCGGGGACCCTaGTCTCTGTCTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGCCRGP*SLSPPR
Trigger: GCGAGGAGGAGACAGAGAGCAGGGTCCCCGGCAGCA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACAGCGCTGTGGCCGTGTaGTGCCGGGGACCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSAVAV*CRGPCS
Trigger: AGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTGGTCTGGGGCCACGTaGTGGGCACCCTTGGCAATC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCWSGAT*WAPLAI
Trigger: GATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAGCCCAGAAGAAGTCTaGACAGGTCCCGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSPEEV*TGPGTL
Trigger: CAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTGTACACGGTGCCACTaGCGGTTCATCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWCTRCH*RFISPR
Trigger: CCTGGGGGAGATGAACCGCCAGTGGCACCGTGTACA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGGACTCTGCGGGTTGTaGGAGTCGATCCAGGACACT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTGLCGL*ESIQDT
Trigger: AGTGTCCTGGATCGACTCCCACAACCCGCAGAGTCC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACCCGGGAGGAGCATGTaGGTGCTGGACTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGPGRSM*VLDSAG
Trigger: ACCCGCAGAGTCCAGCACCCACATGCTCCTCCCGGG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACCAGTGCCGTGGCCGTaGCCCGAATCCATTGCCGGT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTPVPWP*PESIAG
Trigger: ACCGGCAATGGATTCGGGCCACGGCCACGGCACTGG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCGCTGGTTGCCCTCGTaGACCATCTGCTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPRWLPS*TICFSL
Trigger: CAGGCTGAAGCAGATGGTCCACGAGGGCAACCAGCG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGAGGTGAGCCGCCGGTaGAACCGGGAGACCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTEVSRR*NRETLP
Trigger: TGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACCTC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCCCACGTCGCCTGTGTaGTCCCACTCCAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWPTSPV*SHSRGM
Trigger: CATCCCCCTGGAGTGGGACCACACAGGCGACGTGGG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACCCACGTCGCCTGTGTaGTCCCACTCCAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTPTSPV*SHSRGM
Trigger: CATCCCCCTGGAGTGGGACCACACAGGCGACGTGGG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTGGGTGTTTATAAGGGGTGCTaGACGCAGGGGGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: EAGPPSLPRRSWAGVRLGVYKGC*TQGEQV
Trigger: CACCTGTTCCCCCTGCGTCCAGCACCCCTTATAAAC...ACCCAGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCCGGGGGTCTGCCTTTaGATCGGTGACATGAGCCTT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGPGVCL*IGDMSL
Trigger: AAGGCTCATGTCACCGATCCAAAGGCAGACCCCCGG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGGTGAGGCTGGGTTCTaGGTTCCCTGCAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTGEAGF*VPCKAI
Trigger: AATGGCCTTGCAGGGAACCCAGAACCCAGCCTCACC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGGAGGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGGTGAGGCTGGGTTCTaGGTTCCCTGCAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: AGGEPPVEPGDPSKHLLAGEAGF*VPCKAI
Trigger: AATGGCCTTGCAGGGAACCCAGAACCCAGCCTCACC...TGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACCTCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGATGTTGCAGGAGGCTaGTCCCCCGAGTCTACCTCG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLADVAGG*SPESTS
Trigger: CGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCTTTGCTCGGGGAGCTaGCACGGATGTTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPLCSGS*HGCCRR
Trigger: CCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCTTTGCTCGGGGAGCTaGCACGGATGTTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLALCSGS*HGCCRR
Trigger: CCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCATGCGCCACCACACCTaGCTACATGGGCGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPMRHHT*LHGRSA
Trigger: GGCTGAACGCCCATGTAGCCAGGTGTGGTGGCGCAT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGTGGCGCATTGTTCCTaGGCCCACAAAAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAVAHCS*AHKRRA
Trigger: GGCCCTTCTTTTGTGGGCTCAGGAACAATGCGCCAC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAGCCAAGCTTCAGTTTaGTGGAGGGGTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASQASV*WRGGGK
Trigger: CTTGCCCCCACCCCTCCATCAAACTGAAGCTTGGCT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCAGCAGTGCTGCCACTaGGTGCATGGCAGTTGGATT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTQQCCH*VHGSWI
Trigger: AATCCAACTGCCATGCACTCAGTGGCAGCACTGCTG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATCAGTGAGGGTCTTCTaGACCAGCGGGGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSVRVF*TSGASL
Trigger: CAGCGAGGCCCCGCTGGTTCAGAAGACCCTCACTGA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTGGCTTCGAGGGAAGTaGTGCTCTCCACTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGWLRGK*CSPLPW
Trigger: CCAGGGCAGTGGAGAGCATCACTTCCCTCGAAGCCA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTGGCTTCGAGGGAAGTaGTGCTCTCCACTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCWLRGK*CSPLPW
Trigger: CCAGGGCAGTGGAGAGCATCACTTCCCTCGAAGCCA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTCCTCTCAGCTGACTTaGGCCAGTCCTCAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSSQLT*ASPQSE
Trigger: CTCGCTTTGAGGACTGGCTCAAGTCAGCTGAGAGGA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTCCTCTCAGCTGACTTaGGCCAGTCCTCAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSSQLT*ASPQSE
Trigger: CTCGCTTTGAGGACTGGCTCAAGTCAGCTGAGAGGA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCAGGAGGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCATCCTCTCAGCTGACTTaGGCCAGTCCTCAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: AGGEPPVEPGDPSKHLLASSQLT*ASPQSE
Trigger: CTCGCTTTGAGGACTGGCTCAAGTCAGCTGAGAGGA...TGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACCTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTGCCGTCCTCTCAGCTaGCTTGAGCCAGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTCRPLS*LEPVLK
Trigger: TTTGAGGACTGGCTCAAGTCAGCTGAGAGGACGGCA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGCTGTGACCCGCCTCTaGAGGTTGTCCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHAVTRL*RLSQRW
Trigger: CCAGCGCTGGGACAACCTTCAGAGGCGGGTCACAGC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGCTGTGACCCGCCTCTaGAGGTTGTCCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAAVTRL*RLSQRW
Trigger: CCAGCGCTGGGACAACCTTCAGAGGCGGGTCACAGC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTGACTGCTGCTCTGTaGTACCGGCCAGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTLTAAL*YRPVPR
Trigger: ACGGGGGACTGGCCGGTATCACAGAGCAGCAGTCAG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCCTGACTGCTGCTCTGTaGTACCGGCCAGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: LVVMLGTGRAVGNMPRVALTAAL*YRPVPR
Trigger: ACGGGGGACTGGCCGGTATCACAGAGCAGCAGTCAG...GGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCTGGATCGCGCCTTTTaGTCGCTCTCCCTCTCGCTT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPLDRAF*SLSLSL
Trigger: AAGCGAGAGGGAGAGCGAGCAAAAGGCGCGATCCAG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCGGCCACCTGGGTCTTaGAGGCATGCAGGACTTCTG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGRPPGS*RHAGLL
Trigger: CAGAAGTCCTGCATGCCTGCAAGACCCAGGTGGCCG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTGGCACCCTACCAGCTaGTGTTCCAGCACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCWHPTS*CSSTCC
Trigger: GCAGCAGGTGCTGGAACAGCAGCTGGTAGGGTGCCA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTATTCCATGTACACGGTaGCACTGGCGGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: AGGWSPESTSSKLGRGEAIPCTR*HWRFIS
Trigger: GGAGATGAACCGCCAGTGGCACCGTGTACATGGAAT...AGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCTGCTGCTTCAGCCTTaGGGCAGCTTCACCATGAGC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPLLLQP*GSFTMS
Trigger: GCTCATGGTGAAGCTGCCGCAAGGCTGAAGCAGCAG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCGAGCTGTTGAAACTTTaGTTCCTGCTGCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PGPPLRGRSAVAVCCRGPELLKL*FLLLQP
Trigger: AGGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTC...GGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCTTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTCTAGCTCCTTTATGTCCTaGAGGGCTGGGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: CFARGAGTDVAGGWSPESSSFMS*RAGGRI
Trigger: GATCCTGCCCCCAGCCCTGCAGGACATAAAGGAGCT...AGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCATGAGCGACTGTCGTAAGCCCCCTCTCCAGCTGTCCACTGCGCCCTGTGCTGGAGGAGCATGTGGGTaGTGGACTCTGCGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: CMSDCRKPPLQLSTAPCAGGACG*WTLRVV
Trigger: CACAACCCGCAGAGTCCAGCACCCACATGCTCCTCC...AGCACAGGGCGCAGTGGACAGCTGGAGAGGGGGCTTACGACAGTCGCTCATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCACGTCACCCTTCCTCTaGCGAACACCCTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLATSPFL*RTPWTA
Trigger: TGCTGTCCAGGGTGTTCGGCAGAGGAAGGGTGACGT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCACAGTGCTCTGGAACTaGTTAATCATCTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PGPPLRGRSAVAVCCRGPTVLWN*LIISAS
Trigger: GCTGGCAGAGATGATTAAGCAGTTCCAGAGCACTGT...GGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTCTTCCACGAGAACGTaGCGGGTTAAGTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSSTRT*RVKSAF
Trigger: GAAGGCGGACTTAACCCGGCACGTTCTCGTGGAAGA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCAGGCATCGGAGTCGTaGAGTAGGACGTCACAGATG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTQASES*SRTSQM
Trigger: CATCTGTGACGTCCTACTGCACGACTCCGATGCCTG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCACACTCGGTCTCATTTaGACAGGCATCGGAGTCGTG +
Preference number: 4 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSTLGLI*TGIGVV
Trigger: CACGACTCCGATGCCTGTGCAAATGAGACCGAGTGT...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCTTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTCTAGGCTCCTGGTGGTCTaGTGGATCGAGTCACACTCG +
Preference number: 4 (lower is better)
Translates to: CFARGAGTDVAGGWSPESRLLVV*WIESHS
Trigger: CGAGTGTGACTCGATCCAGCAGACCACCAGGAGCCT...AGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTGCTGGCCGTGTCTGTaGGGTTCTCCCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQCWPCL*GSPGPA
Trigger: GGCTGGCCCGGGAGAACCGCACAGACACGGCCAGCA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCCATCTGCTTCAGCCTaGTGGCCGTGTCTGTGCGGT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGPSASA*WPCLCG
Trigger: ACCGCACAGACACGGCCAGCAGGCTGAAGCAGATGG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCCCTCGTGGACCATCTaGTTCAGCCTGCTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWPSWTI*FSLLAV
Trigger: CACGGCCAGCAGGCTGAAGCAGATGGTCCACGAGGG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCCCTCGTGGACCATCTaGTTCAGCCTGCTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: ACSDARDRKGCREHATSGPSWTI*FSLLAV
Trigger: CACGGCCAGCAGGCTGAAGCAGATGGTCCACGAGGG...GCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTGTCCCAGCGCTGGTTaGCCTCGTGGACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSCPSAG*PRGPSA
Trigger: AGCAGATGGTCCACGAGGGCAACCAGCGCTGGGACA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTCCACGTTGGTCAGCTaGAGGTCCATCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSTLVS*RSISVS
Trigger: GCTCACAGAGATGGACCTGCAGCTGACCAACGTGGA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCATGAGCGACTGTCGTAAGCCCCCTCTCCAGCTGTCCACTGCGCCCTGTGCTCTTCCTGCTGTGGGTTaGCATTCAGGACTCGCGGGC +
Preference number: 4 (lower is better)
Translates to: CMSDCRKPPLQLSTAPCALPAVG*HSGLAG
Trigger: GCCCGCGAGTCCTGAATGGCAACCCACAGCAGGAAG...AGCACAGGGCGCAGTGGACAGCTGGAGAGGGGGCTTACGACAGTCGCTCATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGAGAGCCCGGGGGTCTaGCTTTGGATCGGTGACATG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGESPGV*LWIGDM
Trigger: CATGTCACCGATCCAAAGGCAGACCCCCGGGCTCTC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGAGAGCCCGGGGGTCTaGCTTTGGATCGGTGACATG +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSESPGV*LWIGDM
Trigger: CATGTCACCGATCCAAAGGCAGACCCCCGGGCTCTC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTGCTCTGAACTGCTTTaGTCGGGGAGCTGGCACGGA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLACSELL*SGSWHG
Trigger: TCCGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000458046.6
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATGCTGCCGGGGACCCTaGTCTCTGTCTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLACCRGP*SLSPPR
Trigger: GCGAGGAGGAGACAGAGAGCAGGGTCCCCGGCAGCA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCTGTGGCCGTGTGCTaGCGGGGACCCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQAVAVC*RGPCSL
Trigger: CAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGC...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATGGTCTGGGGCCACGTaGTGGGCACCCTTGGCAATC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGWSGAT*WAPLAI
Trigger: GATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAATACCCGGGGCACCTaGCACACAGGTTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCNTRGT*HTGSLL
Trigger: GAGCAGGGAACCTGTGTGGCAGGTGCCCCGGGTATT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCAATACCCGGGGCACCTaGCACACAGGTTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPNTRGT*HTGSLL
Trigger: GAGCAGGGAACCTGTGTGGCAGGTGCCCCGGGTATT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCCCGATCTGGGTCTTaGCTTGGTCGAGATCCTCCC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSRSGS*LGRDPP
Trigger: GGGAGGATCTCGACCAAGCCAAGACCCAGATCGGGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCCATGCTTGGTAGCCTaGAGGTCAGTGGTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGPCLVA*RSVVKA
Trigger: TGCCTTGACCACTGACCTCCAGGCTACCAAGCATGG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATCCAGCTCGGCCACCTaGGTCTTGCAGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSSSAT*VLQACR
Trigger: CCTGCATGCCTGCAAGACCCAGGTGGCCGAGCTGGA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGCTCAACTGCCACGTTaGCTTGTTGCAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGAQLPR*LVAATA
Trigger: AGCTGTGGCTGCAACAAGCCAACGTGGCAGTTGAGC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAGCTGGAGCAGACTCTaGGCCTTCTGCAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSWSRL*AFCNWS
Trigger: AGACCAGTTGCAGAAGGCCCAGAGTCTGCTCCAGCT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGGACTCTGCGGGTTGTaGGAGTCGATCCAGGACACT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAGLCGL*ESIQDT
Trigger: AGTGTCCTGGATCGACTCCCACAACCCGCAGAGTCC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGACTCTGCGGGTTGTaGGAGTCGATCCAGGACACT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPGLCGL*ESIQDT
Trigger: AGTGTCCTGGATCGACTCCCACAACCCGCAGAGTCC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGGAGCATGTGGGTGCTaGACTCTGCGGGTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGGACGC*TLRVVG
Trigger: TCCCACAACCCGCAGAGTCCAGCACCCACATGCTCC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACCAGTGCCGTGGCCGTaGCCCGAATCCATTGCCGGT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAPVPWP*PESIAG
Trigger: ACCGGCAATGGATTCGGGCCACGGCCACGGCACTGG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAAGCGCTCCAGTGCCGTaGCCGTGGCCCGAATCCATT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSAPVP*PWPESI
Trigger: AATGGATTCGGGCCACGGCCACGGCACTGGAGCGCT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTGTCCAGGCTCCTGGTaGTCTGCTGGATCGAGTCAC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPCPGSW*SAGSSH
Trigger: GTGACTCGATCCAGCAGACCACCAGGAGCCTGGACA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTGTCCAGGCTCCTGGTaGTCTGCTGGATCGAGTCAC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWCPGSW*SAGSSH
Trigger: GTGACTCGATCCAGCAGACCACCAGGAGCCTGGACA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTCTGCTTCAGCCTGCTaGCCGTGTCTGTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWSASAC*PCLCGS
Trigger: AGAACCGCACAGACACGGCCAGCAGGCTGAAGCAGA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCGCTGGTTGCCCTCGTaGACCATCTGCTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSRWLPS*TICFSL
Trigger: CAGGCTGAAGCAGATGGTCCACGAGGGCAACCAGCG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGCTGCAGGGGTAGGGCTGCCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCCCAGAATGCTCTCCCTaGTGCCCTCAAATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SCRGRAARTTLERKERCGPECSP*CPQILP
Trigger: GGGAAGAATTTGAGGGCACCAGGGAGAGCATTCTGG...GCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAGCCCTACCCCTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCGGAACATGCCACGAGTaGCCATCCGAAATGGATTTA +
Preference number: 4 (lower is better)
Translates to: PGPPLRGRSAVAVCCRGPGTCHE*PSEMDL
Trigger: TAAATCCATTTCGGATGGCCACTCGTGGCATGTTCC...GGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCGCAGGGGGAACAGGTaGAACATTCCTGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGRRGNR*NIPVTF
Trigger: GAAGGTGACAGGAATGTTCCACCTGTTCCCCCTGCG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTGGCGGAGTCTACTTTaGAGCTCTGTGGATTCGGGG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTWRSLL*SSVDSG
Trigger: CCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCAGAGCAGGCTCAGCTaGCGGAGTCTACTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAQSRLS*RSLLWS
Trigger: GCTCCAAAGTAGACTCCGCCAGCTGAGCCTGCTCTG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTCTGCCTCCGGTTCTTaGCACTCGCTAACCACAGCA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSASGS*HSLTTA
Trigger: TGCTGTGGTTAGCGAGTGCCAAGAACCGGAGGCAGA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCCGGGGGTCTGCCTTTaGATCGGTGACATGAGCCTT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAPGVCL*IGDMSL
Trigger: AAGGCTCATGTCACCGATCCAAAGGCAGACCCCCGG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCCGGGGGTCTGCCTTTaGATCGGTGACATGAGCCTT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPPGVCL*IGDMSL
Trigger: AAGGCTCATGTCACCGATCCAAAGGCAGACCCCCGG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCTTTGCTCGGGGAGCTaGCACGGATGTTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPLCSGS*HGCCRR
Trigger: CCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCTTTGCTCGGGGAGCTaGCACGGATGTTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGLCSGS*HGCCRR
Trigger: CCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTTGGTGTACCTCAGCATaGGGTAAAAGGACCGGGCAA +
Preference number: 4 (lower is better)
Translates to: AGGWSPESTSSKLGRGEAWCTSA*GKRTGQ
Trigger: TTGCCCGGTCCTTTTACCCCATGCTGAGGTACACCA...AGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp TGCTTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTCTGCTATGCCCTCTATGTaGGGGGTGGCCCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: CFARGAGTDVAGGWSPESAMPSM*GVAHWC
Trigger: ACACCAATGGGCCACCCCCCACATAGAGGGCATAGC...AGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGGTGGTGTAGCACTGTaGCCAGCTATGCCCTCTATG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGGGVAL*PAMPSM
Trigger: CATAGAGGGCATAGCTGGCCACAGTGCTACACCACC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGGTGGAGGTGGTGTAGCACTGTaGCCAGCTATGCCCTCTATG +
Preference number: 4 (lower is better)
Translates to: AAGGTGRPFQTPPGSSGGGGVAL*PAMPSM
Trigger: CATAGAGGGCATAGCTGGCCACAGTGCTACACCACC...TCCACCGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTGGCAATCAGGCAGGTaGTGTAGCACTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWWQSGR*CSTVAS
Trigger: GCTGGCCACAGTGCTACACCACCTGCCTGATTGCCA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTGGCAATCAGGCAGGTaGTGTAGCACTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAWQSGR*CSTVAS
Trigger: GCTGGCCACAGTGCTACACCACCTGCCTGATTGCCA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCGTGCTGGGCACCCTTaGCAATCAGGCAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPRAGHP*QSGRWC
Trigger: ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCGTGCTGGGCACCCTTaGCAATCAGGCAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCRAGHP*QSGRWC
Trigger: ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCTAAGTCACTCAGATTaGTCTGGGGCCACGTGCTGG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGLSHSD*SGATCW
Trigger: CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCTAAGTCACTCAGATTaGTCTGGGGCCACGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTLSHSD*SGATCW
Trigger: CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCGTGTCTTAGAGCCCTaGCACTGCATGAGCGACTGT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTRVLEP*HCMSDC
Trigger: ACAGTCGCTCATGCAGTGCCAGGGCTCTAAGACACG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458046.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCATGTCCATCTCAGTTaGAGAAGTGAACGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTHVHLS*RSERPP
Trigger: GGGCGGACGTTCACTTCTTCAACTGAGATGGACATG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGAGTGAAGACCAAGACTaGGGCGATGGCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWSEDQD*GDGSAF
Trigger: GAAGGCAGAGCCATCGCCTCAGTCTTGGTCTTCACT...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTTCAATCCAATTCCCTaGAGCTCACTGCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGFNPIP*SSLQRS
Trigger: GGAGCGCTGCAGTGAGCTTCAGGGAATTGGATTGAA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTGGTTTGGTAGAGGCTaGAGCGCTCCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCWFGRG*SAPGPS
Trigger: TGAAGGGCCAGGAGCGCTTCAGCCTCTACCAAACCA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTCCTCTCAGCTGACTTaGGCCAGTCCTCAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWSSQLT*ASPQSE
Trigger: CTCGCTTTGAGGACTGGCTCAAGTCAGCTGAGAGGA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCATCGGCGTCACTCTCTaGGAAGTGCTCCACGTTGGT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAIGVTL*EVLHVG
Trigger: ACCAACGTGGAGCACTTCTCAGAGAGTGACGCCGAT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TTTGCACAGGCATCGGAGTCGTGCAGTAGGACGTCACAGATGTTAAACACGGACCCGGAGTGCAGGAGGTaGGCCGCCGGTGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: FAQASESCSRTSQMLNTDPECRR*AAGGTG
Trigger: CCCGGTTCCACCGGCGGCTCACCTCCTGCACTCCGG...GTCCGTGTTTAACATCTGTGACGTCCTACTGCACGACTCCGATGCCTGTGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCTGTCGAAGGCACCTaGCTGCTGCTCTGTGATACC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSVEGT*LLLCDT
Trigger: GGTATCACAGAGCAGCAGTCAGGTGCCTTCGACAGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCCTTGCTGCTCACGTTaGCAGAGACCACTAATGCCT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGPCCSR*QRPLMP
Trigger: AGGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCATCCGAAATGAGTCCTGGCACTGCATaGGCGACTGTCGTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: CSGQEGLSGTCHEWPSEMSPGTA*ATVVSP
Trigger: GGGGCTTACGACAGTCGCTCATGCAGTGCCAGGACT...CATTTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553289.5
CDS-3UTR TCA 90 bp AGCTGCAGGGGTAGGGCTGCCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCCACAGCAGCAGATTTTaGCTCAACTGGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SCRGRAARTTLERKERCGHSSRF*LNWWKS
Trigger: GGACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTG...GCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAGCCCTACCCCTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTTTGGATCGGTGACATaGGCCTTCTGCCTCCGGTTC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAFGSVT*AFCLRF
Trigger: GAACCGGAGGCAGAAGGCTCATGTCACCGATCCAAA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TCGCCTTCTGTAGTTCTCACTGCTCTGAACTGCTTTGCTCGGGGAGCTGGCACGTGCCCGGACCACCCTTaGGAGGAAGGAGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SPSVVLTALNCFARGAGTCPDHP*EEGALW
Trigger: CCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCA...CGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAAGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCTGGATCGCGCCTTTTaGTCGCTCTCCCTCTCGCTT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGLDRAF*SLSLSL
Trigger: AAGCGAGAGGGAGAGCGAGCAAAAGGCGCGATCCAG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCCTCGTTTTTCGACGTaGCTCCCGCTGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWPRFST*LPLWAA
Trigger: TGCAGCCCACAGCGGGAGGCACGTCGAAAAACGAGG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACCTCGTTTTTCGACGTaGCTCCCGCTGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGPRFST*LPLWAA
Trigger: TGCAGCCCACAGCGGGAGGCACGTCGAAAAACGAGG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCACCTCTTCCTCGACTaGTGCCAGGTAAGACATGGA +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTHLFLD*CQVRHG
Trigger: TCCATGTCTTACCTGGCAGCAGTCGAGGAAGAGGTG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTGGCACCCTACCAGCTaGTGTTCCAGCACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWWHPTS*CSSTCC
Trigger: GCAGCAGGTGCTGGAACAGCAGCTGGTAGGGTGCCA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAGACTCTGGGCCTTCTaGAACTGGTCTGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTRLWAF*NWSAMA
Trigger: AGCCATTGCAGACCAGTTGCAGAAGGCCCAGAGTCT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCCCTGGACAGCATTCTaGCACCGATCCGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAPWTAF*HRSVSF
Trigger: AAAGCTGACGGATCGGTGGCAGAATGCTGTCCAGGG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCCTGGACAGCATTCTaGCACCGATCCGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWPWTAF*HRSVSF
Trigger: AAAGCTGACGGATCGGTGGCAGAATGCTGTCCAGGG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCACGGACTCCACCCCTaGGCTGTGTTGTTCAATATC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGHGLHP*AVLFNI
Trigger: GATATTGAACAACACAGCGCAGGGGTGGAGTCCGTG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCAGGCATCGGAGTCGTaGAGTAGGACGTCACAGATG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAQASES*SRTSQM
Trigger: CATCTGTGACGTCCTACTGCACGACTCCGATGCCTG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCAGGCATCGGAGTCGTaGAGTAGGACGTCACAGATG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPQASES*SRTSQM
Trigger: CATCTGTGACGTCCTACTGCACGACTCCGATGCCTG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCACACTCGGTCTCATTTaGACAGGCATCGGAGTCGTG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTTLGLI*TGIGVV
Trigger: CACGACTCCGATGCCTGTGCAAATGAGACCGAGTGT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCAGGCTCCTGGTGGTCTaGTGGATCGAGTCACACTCG +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSRLLVV*WIESHS
Trigger: CGAGTGTGACTCGATCCAGCAGACCACCAGGAGCCT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTCTCCTCGATTTTCATaGGCCGCTCCATGGACATGG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSPRFS*AAPWTW
Trigger: CCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGCCAGCCGCCGGTACTaGTTGTTGATGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGASRRY*LLMSSS
Trigger: GCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTGTACAACACCTCTGAGGAATTTGGGCAGGCTGCCGTCCTCTCAGCTGACTTGTGCTGGCCGTGTCTGTaGGGTTCTCCCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VYNTSEEFGQAAVLSADLCWPCL*GSPGPA
Trigger: GGCTGGCCCGGGAGAACCGCACAGACACGGCCAGCA...CAAGTCAGCTGAGAGGACGGCAGCCTGCCCAAATTCCTCAGAGGTGTTGTACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACCATCTGCTTCAGCCTaGTGGCCGTGTCTGTGCGGT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTPSASA*WPCLCG
Trigger: ACCGCACAGACACGGCCAGCAGGCTGAAGCAGATGG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGGGCTGTCGGGAACATaGCACGAGTGGCCATCCGAA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTGLSGT*HEWPSE
Trigger: TTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACTCGCGGGCCTTCTTTaGCACCATCCGTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLALAGLL*HHPCLE
Trigger: CTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCTTCCTGCTGTGGGTTaGCATTCAGGACTCGCGGGC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWLPAVG*HSGLAG
Trigger: GCCCGCGAGTCCTGAATGGCAACCCACAGCAGGAAG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAGTCCCCCGTCTTCCTaGTGTGGGTTGCCATTCAGG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSPPSS*CGLPFR
Trigger: CCTGAATGGCAACCCACAGCAGGAAGACGGGGGACT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTCGAAGGCACCTGACTaGTGCTCTGTGATACCGGCC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPSKAPD*CSVIPA
Trigger: GGCCGGTATCACAGAGCAGCAGTCAGGTGCCTTCGA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTCGAAGGCACCTGACTaGTGCTCTGTGATACCGGCC +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSSKAPD*CSVIPA
Trigger: GGCCGGTATCACAGAGCAGCAGTCAGGTGCCTTCGA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAGCTGGCACGGATGTTaGAGGAGGCTGGTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASWHGC*RRLVPR
Trigger: TCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTGCTCTGAACTGCTTTaGTCGGGGAGCTGGCACGGA +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGCSELL*SGSWHG
Trigger: TCCGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000458046.6
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTGCTCTGAACTGCTTTaGTCGGGGAGCTGGCACGGA +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSCSELL*SGSWHG
Trigger: TCCGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000458046.6
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAGCTGTGGCCGTGTGCTaGCGGGGACCCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSAVAVC*RGPCSL
Trigger: CAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGC...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCACTGCTCTGAACTTTaGTCGGGGAGCTGGCACGGA +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSHCSEL*SGSWHG
Trigger: TCCGTGCCAGCTCCCCGAGCAAAGTTCAGAGCAGTG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTGGGTAAAGAAACTTTaGTCGGGGAGCTGGCACGGA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGWVKKL*SGSWHG
Trigger: TCCGTGCCAGCTCCCCGAGCAAAGTTTCTTTACCCA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTCAGTCATCCCGATCTaGGTCTTGGCTTGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSVIPI*VLAWSR
Trigger: TCTCGACCAAGCCAAGACCCAGATCGGGATGACTGA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATCCAGCTCGGCCACCTaGGTCTTGCAGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASSSAT*VLQACR
Trigger: CCTGCATGCCTGCAAGACCCAGGTGGCCGAGCTGGA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCTTCATCTCTTAGTTTaGCCACTCGGCTCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGLHLLV*PLGSRR
Trigger: ACGCCGAGAGCCGAGTGGCCAAACTAAGAGATGAAG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGGACTCTGCGGGTTGTaGGAGTCGATCCAGGACACT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCGLCGL*ESIQDT
Trigger: AGTGTCCTGGATCGACTCCCACAACCCGCAGAGTCC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAGCGCTCCAGTGCCGTaGCCGTGGCCCGAATCCATT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASAPVP*PWPESI
Trigger: AATGGATTCGGGCCACGGCCACGGCACTGGAGCGCT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGACTGCAGATAGCAGGTaGCTGGTGTCAGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GEPPVEPGDPSKHLLAVATADSR*LVSVRK
Trigger: CTTCCTCACTGACACCAGCCACCTGCTATCTGCAGT...CGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGGTGGAATCATCTCTGCCAGCTaGGGCTCCATGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: AAGGTGRPFQTPPGSSGGIISAS*GSMSFQ
Trigger: CTGGAAAGACATGGAGCCCCAGCTGGCAGAGATGAT...TCCACCGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCGCTGGTTGCCCTCGTaGACCATCTGCTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWRWLPS*TICFSL
Trigger: CAGGCTGAAGCAGATGGTCCACGAGGGCAACCAGCG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACGCTGGTTGCCCTCGTaGACCATCTGCTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGRWLPS*TICFSL
Trigger: CAGGCTGAAGCAGATGGTCCACGAGGGCAACCAGCG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGTGGAAGCCATTCAGTTaGCGCATCTTGTCATCGGCG +
Preference number: 4 (lower is better)
Translates to: GEPPVEPGDPSKHLLAVAWKPFS*RILSSA
Trigger: CGCCGATGACAAGATGCGCCAACTGAATGGCTTCCA...CGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCAGTGCGCTGTAGTATaGGCCCTCCTCGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGQCAVV*ALLVLF
Trigger: GAAGAGGACGAGGAGGGCCCATACTACAGCGCACTG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGCATGAGCGACTGTCGTAAGCCCCCTCTCCAGCTGTCCACTGCGCCCTGTGCTCAGTGCGCTGTAGTATaGGCCCTCCTCGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CMSDCRKPPLQLSTAPCAQCAVV*ALLVLF
Trigger: GAAGAGGACGAGGAGGGCCCATACTACAGCGCACTG...AGCACAGGGCGCAGTGGACAGCTGGAGAGGGGGCTTACGACAGTCGCTCATGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCAGAGCAGGCTCAGCTaGCGGAGTCTACTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGQSRLS*RSLLWS
Trigger: GCTCCAAAGTAGACTCCGCCAGCTGAGCCTGCTCTG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCTGCCTCCGGTTCTTaGCACTCGCTAACCACAGCA +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSASGS*HSLTTA
Trigger: TGCTGTGGTTAGCGAGTGCCAAGAACCGGAGGCAGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGATGTTGCAGGAGGCTaGTCCCCCGAGTCTACCTCG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGDVAGG*SPESTS
Trigger: CGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGCGGTGGAGTTCCTCCAGCTCATCCTCAATCAGCACAGCATCCAGGGGCTCGCGATGTTGCAGGAGGCTaGTCCCCCGAGTCTACCTCG +
Preference number: 4 (lower is better)
Translates to: SGGVPPAHPQSAQHPGARDVAGG*SPESTS
Trigger: CGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATC...GCGAGCCCCTGGATGCTGTGCTGATTGAGGATGAGCTGGAGGAACTCCACCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGCTATGCCCTCTATGTaGGGGGTGGCCCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCAMPSM*GVAHWC
Trigger: ACACCAATGGGCCACCCCCCACATAGAGGGCATAGC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACCAGGGAGCCCGTGCTaGGTAAGCCCAGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGPGSPC*VSPEEV
Trigger: GACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCAGGTTCCCTGCTCCTaGGGAGGAACACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGQVPCS*GGTQSE
Trigger: TTCAGATTGTGTTCCTCCCCAGGAGCAGGGAACCTG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGTGCCTGGCCAACTGTaGGTTTATCCAGCACGTGAA +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWVPGQL*VYPARE
Trigger: TTCACGTGCTGGATAAACTCACAGTTGGCCAGGCAC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGTGGCGCATTGTTCCTaGGCCCACAAAAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWVAHCS*AHKRRA
Trigger: GGCCCTTCTTTTGTGGGCTCAGGAACAATGCGCCAC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAGCCAAGCTTCAGTTTaGTGGAGGGGTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSQASV*WRGGGK
Trigger: CTTGCCCCCACCCCTCCATCAAACTGAAGCTTGGCT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCCTTGTGTTTTGAAATaGGTTCACCGGGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGPCVLK*VHRGSL
Trigger: GAGAGAGCCCCGGTGAACTCATTTCAAAACACAAGG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCAGCAGTGCTGCCACTaGGTGCATGGCAGTTGGATT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPQQCCH*VHGSWI
Trigger: AATCCAACTGCCATGCACTCAGTGGCAGCACTGCTG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTCAGTGAGGGTCTTCTaGACCAGCGGGGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSVRVF*TSGASL
Trigger: CAGCGAGGCCCCGCTGGTTCAGAAGACCCTCACTGA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCACAGTGCTAGCATGGTaGCTCAGTGTCCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTTVLAW*LSVLKE
Trigger: CTCTTTGAGGACACTGAGTCACCATGCTAGCACTGT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGCTTCAGCCTCATGTTaGGTGGCTCCATTATCTCCC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWASASC*VAPLSP
Trigger: GGGAGATAATGGAGCCACTCAACATGAGGCTGAAGC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGACACTGCTGAGGCACTaGCTGAGGGTCAGGAATAGT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWTLLRH*LRVRNS
Trigger: ACTATTCCTGACCCTCAGTCAGTGCCTCAGCAGTGT...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTTCAATCCAATTCCCTaGAGCTCACTGCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWFNPIP*SSLQRS
Trigger: GGAGCGCTGCAGTGAGCTTCAGGGAATTGGATTGAA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGGTGGCTGGTGTCAGTaGGGAAGCGAAACAAGTTCT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAGGWCQ*GSETSS
Trigger: AGAACTTGTTTCGCTTCCTCACTGACACCAGCCACC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTTATGGAGGTCCTCGTaGAGCTCTGGAAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGLWRSS*SSGRGS
Trigger: AGATCCTCTTCCAGAGCTTCACGAGGACCTCCATAA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCGTGTACAACACCTCTaGGGAATTTGGGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPRVQHL*GIWAGC
Trigger: GCAGCCTGCCCAAATTCCTCAGAGGTGTTGTACACG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGCCTGGAGGCGTGTACAACACCTCTaGGGAATTTGGGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: WVAIQDSRAFFATIRAWRRVQHL*GIWAGC
Trigger: GCAGCCTGCCCAAATTCCTCAGAGGTGTTGTACACG...CCTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCGCTCCCCAAACACAATaGGCTGATCAATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSAPQTQ*ADQSCW
Trigger: CCAACAAGATTGATCAGCTCATTGTGTTTGGGGAGC...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp GGGCCACTAGATGACACAGGGACTGAGGAGATGACGGTTCCTCGCTCTCTCCCCAGGGGCTCGCTCTTCTaGATCAGCTGCTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: GPLDDTGTEEMTVPRSLPRGSLF*ISCSPN
Trigger: GTTTGGGGAGCAGCTGATTCAGAAGAGCGAGCCCCT...GGGGAGAGAGCGAGGAACCGTCATCTCCTCAGTCCCTGTGTCATCTAGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTCTGTCGAAGGCACCTaGCTGCTGCTCTGTGATACC +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSVEGT*LLLCDT
Trigger: GGTATCACAGAGCAGCAGTCAGGTGCCTTCGACAGA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCTTGCTGCTCACGTTaGCAGAGACCACTAATGCCT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWPCCSR*QRPLMP
Trigger: AGGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACAGTCCTGGCACTGCATaGGCGACTGTCGTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSPGTA*ATVVSP
Trigger: GGGGCTTACGACAGTCGCTCATGCAGTGCCAGGACT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTTTGGATCGGTGACATaGGCCTTCTGCCTCCGGTTC +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSFGSVT*AFCLRF
Trigger: GAACCGGAGGCAGAAGGCTCATGTCACCGATCCAAA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACGGTACCATGCCCACTaGCAATGGTCTCACACTCCC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGRYHAH*QWSHTP
Trigger: GGGAGTGTGAGACCATTGTCAGTGGGCATGGTACCG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCATGCCACGTGGCCACTaGAAAAACATCCACCTGGAG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPMPRGH*KNIHLE
Trigger: CTCCAGGTGGATGTTTTTTCAGTGGCCACGTGGCAT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCACCCGCTTCAGTATaGGGGGTTCACCCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSPASV*GVHPAV
Trigger: TACGGCTGGGTGAACCCCTCATACTGAAGCGGGTGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTGGATCGCGCCTTTTaGTCGCTCTCCCTCTCGCTT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTLDRAF*SLSLSL
Trigger: AAGCGAGAGGGAGAGCGAGCAAAAGGCGCGATCCAG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCCCATGTACGAAGCCTaGAGGGAGATGACACTCTCT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAPMYEA*REMTLS
Trigger: AGAGAGTGTCATCTCCCTGCAGGCTTCGTACATGGG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCCCATGTACGAAGCCTaGAGGGAGATGACACTCTCT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPPMYEA*REMTLS
Trigger: AGAGAGTGTCATCTCCCTGCAGGCTTCGTACATGGG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTGGAGTCTCAGTAGCTaGTGCAAGGAGTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGWSLSS*CKESSS
Trigger: GCTTGAAGACTCCTTGCAGCAGCTACTGAGACTCCA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTGGAGTCTCAGTAGCTaGTGCAAGGAGTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTWSLSS*CKESSS
Trigger: GCTTGAAGACTCCTTGCAGCAGCTACTGAGACTCCA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCTGAGGCGATGGCTCTaGCTTCTCATCTCCATTATC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGLRRWL*LLISII
Trigger: GATAATGGAGATGAGAAGGCAGAGCCATCGCCTCAG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGGCTCCAAACCTCCTTaGGCGTCAGAAGAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSGSKPP*ASEESR
Trigger: TCTGGACTCTTCTGACGCGCAAGGAGGTTTGGAGCC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCAGCTTTCAGGGACTTaGTTCTACAGACAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTQLSGT*FYRQLQ
Trigger: CTGCAGCTGTCTGTAGAAGCAAGTCCCTGAAAGCTG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTGCTTGAGAAGAGCTTaGAGCCTGTGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPCLRRA*SLWSSW
Trigger: CCATGAGCTCCACAGGCTGCAAGCTCTTCTCAAGCA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCTCCCCCAGGTGCTCTaGAAACTCCGTTCTTTCATA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGLPQVL*KLRSFI
Trigger: TATGAAAGAACGGAGTTTGCAGAGCACCTGGGGGAG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTCATCTCCCCCAGGTaGTCTGCAAACTCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTFISPR*SANSVL
Trigger: AAGAACGGAGTTTGCAGAGCACCTGGGGGAGATGAA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCTTCTGCAACTGGTCTaGAATGGCTTGGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTLLQLV*NGLVHL
Trigger: CAGGTGAACCAAGCCATTGCAGACCAGTTGCAGAAG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGCGGTGGAGTTCCTCCAGCTCATCCTCAATCAGCACAGCATCCAGGGGCTCGCCTGCTGCTTCAGCCTTaGGGCAGCTTCACCATGAGC +
Preference number: 4 (lower is better)
Translates to: SGGVPPAHPQSAQHPGARLLLQP*GSFTMS
Trigger: GCTCATGGTGAAGCTGCCGCAAGGCTGAAGCAGCAG...GCGAGCCCCTGGATGCTGTGCTGATTGAGGATGAGCTGGAGGAACTCCACCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp AGCTGCAGGGGTAGGGCTGCCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCGAGCTGTTGAAACTTTaGTTCCTGCTGCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SCRGRAARTTLERKERCGELLKL*FLLLQP
Trigger: AGGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTC...GCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAGCCCTACCCCTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAGCTCCTTTATGTCCTaGAGGGCTGGGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSSFMS*RAGGRI
Trigger: GATCCTGCCCCCAGCCCTGCAGGACATAAAGGAGCT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGGAGGAGCATGTGGGTaGTGGACTCTGCGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAGGACG*WTLRVV
Trigger: CACAACCCGCAGAGTCCAGCACCCACATGCTCCTCC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCCCTGGACAGCATTCTaGCACCGATCCGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGPWTAF*HRSVSF
Trigger: AAAGCTGACGGATCGGTGGCAGAATGCTGTCCAGGG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCTGCTTAATCATCTCTaGCAGCTGGGGCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWLLNHL*QLGLHV
Trigger: GACATGGAGCCCCAGCTGGCAGAGATGATTAAGCAG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCTGCTTAATCATCTCTaGCAGCTGGGGCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLALLNHL*QLGLHV
Trigger: GACATGGAGCCCCAGCTGGCAGAGATGATTAAGCAG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTCTTCCACGAGAACGTaGCGGGTTAAGTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCSSTRT*RVKSAF
Trigger: GAAGGCGGACTTAACCCGGCACGTTCTCGTGGAAGA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAGGCTCCTGGTGGTCTaGTGGATCGAGTCACACTCG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGRLLVV*WIESHS
Trigger: CGAGTGTGACTCGATCCAGCAGACCACCAGGAGCCT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACCATCTGCTTCAGCCTaGTGGCCGTGTCTGTGCGGT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAPSASA*WPCLCG
Trigger: ACCGCACAGACACGGCCAGCAGGCTGAAGCAGATGG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGAATGCTCTCCCTGGTaGCCTCAAATTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTECSPW*PQILPS
Trigger: AGAGGGAAGAATTTGAGGGCACCAGGGAGAGCATTC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTCACTCTCTGAGAAGTaGTCCACGTTGGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASLSEK*STLVSC
Trigger: GCAGCTGACCAACGTGGAGCACTTCTCAGAGAGTGA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGTGGTTTATAAGGGGTaGTGGACGCAGGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCVVYKG*WTQGEQ
Trigger: CTGTTCCCCCTGCGTCCAGCACCCCTTATAAACCAC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACTTCCTGCTGTGGGTTaGCATTCAGGACTCGCGGGC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLALPAVG*HSGLAG
Trigger: GCCCGCGAGTCCTGAATGGCAACCCACAGCAGGAAG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAGTCCCCCGTCTTCCTaGTGTGGGTTGCCATTCAGG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSPPSS*CGLPFR
Trigger: CCTGAATGGCAACCCACAGCAGGAAGACGGGGGACT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAGCTGGCACGGATGTTaGAGGAGGCTGGTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSWHGC*RRLVPR
Trigger: TCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCTCACTGCTCTGAACTaGTTTGCTCGGGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ACSDARDRKGCREHATSGLTALN*FARGAG
Trigger: GCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAG...GCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATAGCGCTGTGGCCGTGTaGTGCCGGGGACCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDSAVAV*CRGPCS
Trigger: AGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAAGCCCAGAAGAAGTCTaGACAGGTCCCGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSPEEV*TGPGTL
Trigger: CAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACAATACCCGGGGCACCTaGCACACAGGTTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHNTRGT*HTGSLL
Trigger: GAGCAGGGAACCTGTGTGGCAGGTGCCCCGGGTATT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCTTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTCTTTAGAGCCCTGGCACTaGATGAGCGACTGTCGTAAG +
Preference number: 4 (lower is better)
Translates to: CFARGAGTDVAGGWSPESLEPWH*MSDCRK
Trigger: CTTACGACAGTCGCTCATGCAGTGCCAGGGCTCTAA...AGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR GCA 90 bp AGCTGGCGGAGTCTACTTTGGAGCTCTGTGGATTCGGGGCTCTCGGTTTGCAGACCATGGGTGGGCTGCTaGTCAGCGAGCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SWRSLLWSSVDSGLSVCRPWVGC*SASLFW
Trigger: CCAGAAGAGGCTCGCTGAGCAGCAGCCCACCCATGG...TCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCCATGCTTGGTAGCCTaGAGGTCAGTGGTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPPCLVA*RSVVKA
Trigger: TGCCTTGACCACTGACCTCCAGGCTACCAAGCATGG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGCTCAACTGCCACGTTaGCTTGTTGCAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSAQLPR*LVAATA
Trigger: AGCTGTGGCTGCAACAAGCCAACGTGGCAGTTGAGC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGCAACTGGTCTGCAATaGCTTGGTTCACCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWATGLQ*LGSPES
Trigger: GGACTCAGGTGAACCAAGCCATTGCAGACCAGTTGC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACCAGTGCCGTGGCCGTaGCCCGAATCCATTGCCGGT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSPVPWP*PESIAG
Trigger: ACCGGCAATGGATTCGGGCCACGGCCACGGCACTGG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAGGCTGAAGCGCTCCTaGCCCTTCACTGCAGATAGC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWRLKRS*PFTADS
Trigger: GCTATCTGCAGTGAAGGGCCAGGAGCGCTTCAGCCT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGTCTGTCCAGGCTCCTaGTGGTCTGCTGGATCGAGT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWVCPGS*WSAGSS
Trigger: ACTCGATCCAGCAGACCACCAGGAGCCTGGACAGAC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTCATGCGCCGCTCCATaGACATGGCACAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWSCAAP*TWHKCS
Trigger: GGAACATTTGTGCCATGTCCATGGAGCGGCGCATGA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGCTTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTCTAGAAGTGCTCCACGTTaGTCAGCTGCAGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: CFARGAGTDVAGGWSPESRSAPR*SAAGPS
Trigger: AGATGGACCTGCAGCTGACCAACGTGGAGCACTTCT...AGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTGGAAGCCATTCAGTTaGCGCATCTTGTCATCGGCG +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWWKPFS*RILSSA
Trigger: CGCCGATGACAAGATGCGCCAACTGAATGGCTTCCA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCGCCAAGAATCAGTCTaGATTTCTCTGGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGRQESV*ISLGSS
Trigger: GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCGTTTATAAGGGGTGCTaGACGCAGGGGGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPVYKGC*TQGEQV
Trigger: CACCTGTTCCCCCTGCGTCCAGCACCCCTTATAAAC...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTGGCGGAGTCTACTTTaGAGCTCTGTGGATTCGGGG +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCWRSLL*SSVDSG
Trigger: CCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACAGAGCAGGCTCAGCTaGCGGAGTCTACTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTQSRLS*RSLLWS
Trigger: GCTCCAAAGTAGACTCCGCCAGCTGAGCCTGCTCTG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTCTGCCTCCGGTTCTTaGCACTCGCTAACCACAGCA +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPSASGS*HSLTTA
Trigger: TGCTGTGGTTAGCGAGTGCCAAGAACCGGAGGCAGA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGGTGAGGCTGGGTTCTaGGTTCCCTGCAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWGEAGF*VPCKAI
Trigger: AATGGCCTTGCAGGGAACCCAGAACCCAGCCTCACC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGAGGAAGGAGCGCTGTaGCCGTGTGCTGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDEEGAL*PCAAGD
Trigger: GTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTGGTGTACCTCAGCATaGGGTAAAAGGACCGGGCAA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAWCTSA*GKRTGQ
Trigger: TTGCCCGGTCCTTTTACCCCATGCTGAGGTACACCA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTGGTGTACCTCAGCATaGGGTAAAAGGACCGGGCAA +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPWCTSA*GKRTGQ
Trigger: TTGCCCGGTCCTTTTACCCCATGCTGAGGTACACCA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTGGCAATCAGGCAGGTaGTGTAGCACTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWWQSGR*CSTVAS
Trigger: GCTGGCCACAGTGCTACACCACCTGCCTGATTGCCA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTCTGGGGCCACGTGCTaGGCACCCTTGGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSGATC*APLAIR
Trigger: CCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCTAAGTCACTCAGATTaGTCTGGGGCCACGTGCTGG +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSLSHSD*SGATCW
Trigger: CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCAGGTTCCCTGCTCCTaGGGAGGAACACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAQVPCS*GGTQSE
Trigger: TTCAGATTGTGTTCCTCCCCAGGAGCAGGGAACCTG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCAGGTTCCCTGCTCCTaGGGAGGAACACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWQVPCS*GGTQSE
Trigger: TTCAGATTGTGTTCCTCCCCAGGAGCAGGGAACCTG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCGTGTCTTAGAGCCCTaGCACTGCATGAGCGACTGT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCRVLEP*HCMSDC
Trigger: ACAGTCGCTCATGCAGTGCCAGGGCTCTAAGACACG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458046.6
ENST00000555612.5
3UTR CAA 72 bp AGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATaGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: RSRDLANTKSLR*VWGHVLGTLGN
Trigger: ATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAGTTTATCCAGCACGTaGAGGCTTTCTTCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSLSST*RLSSGC
Trigger: ACACCCAGAAGAAAGCCTTCACGTGCTGGATAAACT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAGTTTATCCAGCACGTaGAGGCTTTCTTCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSLSST*RLSSGC
Trigger: ACACCCAGAAGAAAGCCTTCACGTGCTGGATAAACT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGTGGCGCATTGTTCCTaGGCCCACAAAAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAVAHCS*AHKRRA
Trigger: GGCCCTTCTTTTGTGGGCTCAGGAACAATGCGCCAC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTCTTTCACCTTTCCCTaGGCCTCCTCTCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWSFTFP*ASSPVP
Trigger: TGGGACTGGAGAGGAGGCTCAGGGAAAGGTGAAAGA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATCTTTCACCTTTCCCTaGGCCTCCTCTCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSFTFP*ASSPVP
Trigger: TGGGACTGGAGAGGAGGCTCAGGGAAAGGTGAAAGA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCATGCATTAATCTGGTaGTCGAGGCCATCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSHALIW*SRPSQA
Trigger: AGCCTGGGATGGCCTCGATCACCAGATTAATGCATG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCTTGTGTTTTGAAATaGGTTCACCGGGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWPCVLK*VHRGSL
Trigger: GAGAGAGCCCCGGTGAACTCATTTCAAAACACAAGG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAGGACTTCCATGTGGTaGTTAAGCTGGTACAGGCAG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLARTSMW*LSWYRQ
Trigger: CTGCCTGTACCAGCTTAATCACCACATGGAAGTCCT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCACTGCAGCTGATTCCTaGGTAGACTCCTGCACATCA +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPTAADS*VDSCTS
Trigger: TGATGTGCAGGAGTCTACTCAGGAATCAGCTGCAGT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTTCCCAGTTTCTCAGTaGGGTCCTGGATGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWFPVSQ*GPGCVL
Trigger: TAGCACACATCCAGGACCTCACTGAGAAACTGGGAA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAGTTTCCACAGCCCCTaGGCTTTCAGGAACATTCTG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASFHSP*AFRNIL
Trigger: CAGAATGTTCCTGAAAGCTCAGGGGCTGTGGAAACT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCATCAGCCATTCGCTaGATCTGTGGAAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSSAIR*ICGRLS
Trigger: GGAAAGCCTTCCACAGATTCAGCGAATGGCTGATGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTCATCAGCCATTCGCTaGATCTGTGGAAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASSAIR*ICGRLS
Trigger: GGAAAGCCTTCCACAGATTCAGCGAATGGCTGATGA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACACTCCACCTTCCTCTaGTGTTACAGCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTHSTFL*CYSWQP
Trigger: AGGCTGCCAGCTGTAACATCAGAGGAAGGTGGAGTG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTTATCTCCCAGGCCCTaGTCTTTGCAAGTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGLSPRP*SLQVSN
Trigger: GTTAGAGACTTGCAAAGATCAGGGCCTGGGAGATAA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCATTTTGGCCCTGGGGTaGCAAGATCGAGTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPILALG*QDRVWN
Trigger: GTTCCAGACTCGATCTTGTCACCCCAGGGCCAAAAT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAGTCCTGAGACACATTaGGGGACTGTTCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSPETH*GTVLSS
Trigger: ACTGGAAAGAACAGTCCCTCAATGTGTCTCAGGACT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAGATGCAGAACTTGGTaGATGCACGGAGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGRCRTW*MHGVFI
Trigger: GATGAAGACTCCGTGCATTCACCAAGTTCTGCATCT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCATGTTTGCGAGCTGTTaGAACTTTGCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTMFASC*NFASCC
Trigger: GCAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACAT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTTCAATCCAATTCCCTaGAGCTCACTGCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCFNPIP*SSLQRS
Trigger: GGAGCGCTGCAGTGAGCTTCAGGGAATTGGATTGAA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGGTGGCTGGTGTCAGTaGGGAAGCGAAACAAGTTCT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSGGWCQ*GSETSS
Trigger: AGAACTTGTTTCGCTTCCTCACTGACACCAGCCACC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGCCTGGAGGGGTGGCTGGTGTCAGTaGGGAAGCGAAACAAGTTCT +
Preference number: 4 (lower is better)
Translates to: WVAIQDSRAFFATIRAWRGGWCQ*GSETSS
Trigger: AGAACTTGTTTCGCTTCCTCACTGACACCAGCCACC...CCTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTGGTTTGGTAGAGGCTaGAGCGCTCCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHWFGRG*SAPGPS
Trigger: TGAAGGGCCAGGAGCGCTTCAGCCTCTACCAAACCA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGGTGGATGTCCTGAAGTTGACTaGTTCTCCTACCCACAGACT +
Preference number: 4 (lower is better)
Translates to: AAGGTGRPFQTPPGSSGGCPEVD*FSYPQT
Trigger: AGTCTGTGGGTAGGAGAATCAGTCAACTTCAGGACA...TCCACCGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGATCGGCGTCACTCTCTaGGAAGTGCTCCACGTTGGT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWIGVTL*EVLHVG
Trigger: ACCAACGTGGAGCACTTCTCAGAGAGTGACGCCGAT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAATCGGCGTCACTCTCTaGGAAGTGCTCCACGTTGGT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGIGVTL*EVLHVG
Trigger: ACCAACGTGGAGCACTTCTCAGAGAGTGACGCCGAT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCTGCCTTTGGATCGGTaGCATGAGCCTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHLPLDR*HEPSAS
Trigger: GGAGGCAGAAGGCTCATGTCACCGATCCAAAGGCAG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAAGCCCCTTCCCTGGTaGAACTTTCTAATGGAGAGA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGKPLPW*NFLMER
Trigger: TCTCTCCATTAGAAAGTTTCACCAGGGAAGGGGCTT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCACTGAGGGAGAAGTGTaGCTGGCCAACTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPTEGEV*LANCEF
Trigger: AAACTCACAGTTGGCCAGGCACACTTCTCCCTCAGT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAGATGCTTCTTCACATaGTTCAGTACGCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGRCFFT*FSTLST
Trigger: GGTGGACAGCGTACTGAAGCATGTGAAGAAGCATCT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGTCTTCAAGCTCCTTTaGTCGAGCCTGGCATATGGA +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPVFKLL*SSLAYG
Trigger: TCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGAC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTCGCTGCTCTCAGCCTaGTTCATGATGGTCTCTATT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSLLSA*FMMVSI
Trigger: AATAGAGACCATCATGAAGCAGGCTGAGAGCAGCGA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCATGCTTTGGTTCCCTaGCCGTTCTTCTGGAGACTT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPHALVP*PFFWRL
Trigger: AAGTCTCCAGAAGAACGGGCAGGGAACCAAAGCATG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTTGACACCAAGGCCTTaGTCTGTTCCAAGCGCTCTA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLALTPRP*SVPSAL
Trigger: TAGAGCGCTTGGAACAGAGCAAGGCCTTGGTGTCAA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTGGCACCCTACCAGCTaGTGTTCCAGCACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQWHPTS*CSSTCC
Trigger: GCAGCAGGTGCTGGAACAGCAGCTGGTAGGGTGCCA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCCCAACTCCCTTCACTaGTCTCAGCTTCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPPNSLH*SQLHLA
Trigger: TGCAAGATGAAGCTGAGAGCAGTGAAGGGAGTTGGG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCCCAACTCCCTTCACTaGTCTCAGCTTCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAPNSLH*SQLHLA
Trigger: TGCAAGATGAAGCTGAGAGCAGTGAAGGGAGTTGGG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCTGCTGCTTCAGCCTTaGGGCAGCTTCACCATGAGC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHLLLQP*GSFTMS
Trigger: GCTCATGGTGAAGCTGCCGCAAGGCTGAAGCAGCAG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAGCTCCTTTATGTCCTaGAGGGCTGGGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASSFMS*RAGGRI
Trigger: GATCCTGCCCCCAGCCCTGCAGGACATAAAGGAGCT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTGTGGCCCGAATCCATTaGCGGTTCATATTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: AGGWSPESTSSKLGRGEAVARIH*RFIFCN
Trigger: GTTACAAAATATGAACCGGCAATGGATTCGGGCCAC...AGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATACTGCAGCGCTCCAGTaGCGTGGCCGTGGCCCGAAT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDTAALQ*RGRGPN
Trigger: ATTCGGGCCACGGCCACGGCACTGGAGCGCTGCAGT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACACTGCAGCGCTCCAGTaGCGTGGCCGTGGCCCGAAT +
Preference number: 4 (lower is better)
Translates to: GFWVPCKAIKSWDTCSRNTAALQ*RGRGPN
Trigger: ATTCGGGCCACGGCCACGGCACTGGAGCGCTGCAGT...GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACACGTCACCCTTCCTCTaGCGAACACCCTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHTSPFL*RTPWTA
Trigger: TGCTGTCCAGGGTGTTCGGCAGAGGAAGGGTGACGT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGAAGTAGTGAAATCTTaGCACTGCCTCACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAEVVKS*HCLTSP
Trigger: TGGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCTGCTTAATCATCTCTaGCAGCTGGGGCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCLLNHL*QLGLHV
Trigger: GACATGGAGCCCCAGCTGGCAGAGATGATTAAGCAG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATCTTCCACGAGAACGTaGCGGGTTAAGTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSSTRT*RVKSAF
Trigger: GAAGGCGGACTTAACCCGGCACGTTCTCGTGGAAGA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCGCTGTAGATCCTGCTaGTCAGCGAGCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHRCRSC*SASLFW
Trigger: CCAGAAGAGGCTCGCTGAGCAGCAGGATCTACAGCG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCACGGACTCCACCCCTaGGCTGTGTTGTTCAATATC +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSHGLHP*AVLFNI
Trigger: GATATTGAACAACACAGCGCAGGGGTGGAGTCCGTG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCACGGACTCCACCCCTaGGCTGTGTTGTTCAATATC +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGHGLHP*AVLFNI
Trigger: GATATTGAACAACACAGCGCAGGGGTGGAGTCCGTG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACAGGCATCGGAGTCGTaGAGTAGGACGTCACAGATG +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTQASES*SRTSQM
Trigger: CATCTGTGACGTCCTACTGCACGACTCCGATGCCTG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACACTCGGTCTCATTTaGACAGGCATCGGAGTCGTG +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSTLGLI*TGIGVV
Trigger: CACGACTCCGATGCCTGTGCAAATGAGACCGAGTGT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACAGGCTCCTGGTGGTCTaGTGGATCGAGTCACACTCG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHRLLVV*WIESHS
Trigger: CGAGTGTGACTCGATCCAGCAGACCACCAGGAGCCT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTCTCCTCGATTTTCATaGGCCGCTCCATGGACATGG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSPRFS*AAPWTW
Trigger: CCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGCCGCCAGCCGCCGGTACTaGTTGTTGATGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FSSCISSLRHSRRARGSAASRRY*LLMSSS
Trigger: GCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGC...GGCAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACCCTCGTGGACCATCTaGTTCAGCCTGCTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSPSWTI*FSLLAV
Trigger: CACGGCCAGCAGGCTGAAGCAGATGGTCCACGAGGG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATCCACGTTGGTCAGCTaGAGGTCCATCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSTLVS*RSISVS
Trigger: GCTCACAGAGATGGACCTGCAGCTGACCAACGTGGA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGTGGTTTATAAGGGGTaGTGGACGCAGGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWVVYKG*WTQGEQ
Trigger: CTGTTCCCCCTGCGTCCAGCACCCCTTATAAACCAC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGCGGTGGAGTTCCTCCAGCTCATCCTCAATCAGCACAGCATCCAGGGGCTCGCGTGGTTTATAAGGGGTaGTGGACGCAGGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: SGGVPPAHPQSAQHPGARVVYKG*WTQGEQ
Trigger: CTGTTCCCCCTGCGTCCAGCACCCCTTATAAACCAC...GCGAGCCCCTGGATGCTGTGCTGATTGAGGATGAGCTGGAGGAACTCCACCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCTTTGCCACCATCCGTaGCTGGAGGTAATAGTAGCT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLALCHHP*LEVIVA
Trigger: AGCTACTATTACCTCCAGGCACGGATGGTGGCAAAG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTCGGGGCTCTCGGTTTaGAGAAATTCCTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCSGLSV*RNSLLL
Trigger: GAGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTCGGGGCTCTCGGTTTaGAGAAATTCCTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSSGLSV*RNSLLL
Trigger: GAGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTGGAAGTCCTGGCACTaGATGAGCGACTGTCGTAAG +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSWKSWH*MSDCRK
Trigger: CTTACGACAGTCGCTCATGCAGTGCCAGGACTTCCA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCAGTTGTTGGCCTGAGTaGAGCTGTAGTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSCWPE*SCSLLR
Trigger: CCGAAGAAGACTACAGCTGCACTCAGGCCAACAACT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAGTTGTTGGCCTGAGTaGAGCTGTAGTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASCWPE*SCSLLR
Trigger: CCGAAGAAGACTACAGCTGCACTCAGGCCAACAACT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAGCCCAGAAGAAGTCTaGACAGGTCCCGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASPEEV*TGPGTL
Trigger: CAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTGGATGGCCATTTTATaGAGAGGCAGGTCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGWMAIL*RGRSEP
Trigger: TGGCTCGGACCTGCCTCTCCATAAAATGGCCATCCA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCATCTGGGTCTTGGCTTaGTCGAGATCCTCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSIWVLA*SRSSLS
Trigger: GCTAAGGGAGGATCTCGACCAAGCCAAGACCCAGAT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTCAGTCATCCCGATCTaGGTCTTGGCTTGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPSVIPI*VLAWSR
Trigger: TCTCGACCAAGCCAAGACCCAGATCGGGATGACTGA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATTAGTTCAGCTTCCGTaGCAGCTGTCTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTLVQLP*QLSPPW
Trigger: CCAGGGTGGAGACAGCTGCCACGGAAGCTGAACTAA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTTCTCAGTGAGGTCCTaGATGTGTGCTACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGFSVRS*MCATVD
Trigger: ATCCACAGTAGCACACATCCAGGACCTCACTGAGAA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTCTCAGTGAGGTCCTaGATGTGTGCTACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTFSVRS*MCATVD
Trigger: ATCCACAGTAGCACACATCCAGGACCTCACTGAGAA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTCTCTGTAAGACAGTaGCAACGAGGACATGGACTG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTFSVRQ*QRGHGL
Trigger: CAGTCCATGTCCTCGTTGCCACTGTCTTACAGAGAA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGGTTTCATTCCTGTTTaGGGCAACCTCAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGGFIPV*GNLSST
Trigger: AGTGGAACTGAGGTTGCCCCAAACAGGAATGAAACC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGCTCAACTGCCACGTTaGCTTGTTGCAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGAQLPR*LVAATA
Trigger: AGCTGTGGCTGCAACAAGCCAACGTGGCAGTTGAGC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCAGCCTCATGTTGAGTaGCTCCATTATCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGQPHVE*LHYLPG
Trigger: GCCTGGGAGATAATGGAGCCACTCAACATGAGGCTG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCTCTGCCGAACACCCTaGACAGCATTCTGCCACCGA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHLCRTP*TAFCHR
Trigger: TCGGTGGCAGAATGCTGTCCAGGGTGTTCGGCAGAG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACAGGCTGAAGCGCTCCTaGCCCTTCACTGCAGATAGC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHRLKRS*PFTADS
Trigger: GCTATCTGCAGTGAAGGGCCAGGAGCGCTTCAGCCT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCATCATCTCTGCCAGCTaGGGCTCCATGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSIISAS*GSMSFQ
Trigger: CTGGAAAGACATGGAGCCCCAGCTGGCAGAGATGAT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGGTCCTCGTGAAGCTCTaGAAGAGGATCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: GEPPVEPGDPSKHLLAVAVLVKL*KRIFTL
Trigger: CAAAGTGAAGATCCTCTTCCAGAGCTTCACGAGGAC...CGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTCTCCTGTTTACGTATaGCCACCCTTAAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSPVYV*PPLSRG
Trigger: ACCTCTGCTTAAGGGTGGCCATACGTAAACAGGAGA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACTCCTGGTGGTCTGCTaGATCGAGTCACACTCGGTC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLALLVVC*IESHSV
Trigger: GACCGAGTGTGACTCGATCCAGCAGACCACCAGGAG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCTCCTGGTGGTCTGCTaGATCGAGTCACACTCGGTC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHLLVVC*IESHSV
Trigger: GACCGAGTGTGACTCGATCCAGCAGACCACCAGGAG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTCATGCGCCGCTCCATaGACATGGCACAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSCAAP*TWHKCS
Trigger: GGAACATTTGTGCCATGTCCATGGAGCGGCGCATGA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCCAGAATGCTCTCCCTaGTGCCCTCAAATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSPECSP*CPQILP
Trigger: GGGAAGAATTTGAGGGCACCAGGGAGAGCATTCTGG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCAGAAGTGCTCCACGTTaGTCAGCTGCAGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPRSAPR*SAAGPS
Trigger: AGATGGACCTGCAGCTGACCAACGTGGAGCACTTCT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CATCCGAAATGGATTTACCTGACAGTGCGCTGTAGTATGGGCCCTCCTCGTCCTGAGGTGAGCCGCCGGTaGAACCGGGAGACCCTTCCA +
Preference number: 4 (lower is better)
Translates to: HPKWIYLTVRCSMGPPRPEVSRR*NRETLP
Trigger: TGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACCTC...AGGACGAGGAGGGCCCATACTACAGCGCACTGTCAGGTAAATCCATTTCGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACAGTGCGCTGTAGTATaGGCCCTCCTCGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAQCAVV*ALLVLF
Trigger: GAAGAGGACGAGGAGGGCCCATACTACAGCGCACTG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACGCAGGGGGAACAGGTaGAACATTCCTGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGRRGNR*NIPVTF
Trigger: GAAGGTGACAGGAATGTTCCACCTGTTCCCCCTGCG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGGCCACTAGATGACACAGGGACTGAGGAGATGACGGTTCCTCGCTCTCTCCCCTCTGCCTCCGGTTCTTaGCACTCGCTAACCACAGCA +
Preference number: 4 (lower is better)
Translates to: GPLDDTGTEEMTVPRSLPSASGS*HSLTTA
Trigger: TGCTGTGGTTAGCGAGTGCCAAGAACCGGAGGCAGA...GGGGAGAGAGCGAGGAACCGTCATCTCCTCAGTCCCTGTGTCATCTAGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATCTGCCTCCGGTTCTTaGCACTCGCTAACCACAGCA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSASGS*HSLTTA
Trigger: TGCTGTGGTTAGCGAGTGCCAAGAACCGGAGGCAGA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGGTGAGGCTGGGTTCTaGGTTCCCTGCAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAGEAGF*VPCKAI
Trigger: AATGGCCTTGCAGGGAACCCAGAACCCAGCCTCACC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTACCGGGCAAAGTTGTTaGCCTGAGTGCAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGTGQSC*PECSCS
Trigger: ACTACAGCTGCACTCAGGCCAACAACTTTGCCCGGT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACCGGGCAAAGTTGTTaGCCTGAGTGCAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSTGQSC*PECSCS
Trigger: ACTACAGCTGCACTCAGGCCAACAACTTTGCCCGGT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTGGTGTACCTCAGCATaGGGTAAAAGGACCGGGCAA +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGWCTSA*GKRTGQ
Trigger: TTGCCCGGTCCTTTTACCCCATGCTGAGGTACACCA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTGGTGTACCTCAGCATaGGGTAAAAGGACCGGGCAA +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSWCTSA*GKRTGQ
Trigger: TTGCCCGGTCCTTTTACCCCATGCTGAGGTACACCA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGCTATGCCCTCTATGTaGGGGGTGGCCCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHAMPSM*GVAHWC
Trigger: ACACCAATGGGCCACCCCCCACATAGAGGGCATAGC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGGTGGTGTAGCACTGTaGCCAGCTATGCCCTCTATG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGGGVAL*PAMPSM
Trigger: CATAGAGGGCATAGCTGGCCACAGTGCTACACCACC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TCCTGCTGTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGGGTGGTGTAGCACTGTaGCCAGCTATGCCCTCTATG +
Preference number: 4 (lower is better)
Translates to: SCCGLPFRTRGPSLPPSVGGVAL*PAMPSM
Trigger: CATAGAGGGCATAGCTGGCCACAGTGCTACACCACC...CACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCACAGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTGGCAATCAGGCAGGTaGTGTAGCACTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHWQSGR*CSTVAS
Trigger: GCTGGCCACAGTGCTACACCACCTGCCTGATTGCCA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATCTGGGGCCACGTGCTaGGCACCCTTGGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSGATC*APLAIR
Trigger: CCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTCACTCAGATTGGTCTaGGGCCACGTGCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSLRLV*GHVLGT
Trigger: GGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACTAAGTCACTCAGATTaGTCTGGGGCCACGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGLSHSD*SGATCW
Trigger: CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGCTGGCGGAGTCTACTTTGGAGCTCTGTGGATTCGGGGCTCTCGGTTTGCAGACCAGGGAGCCCGTGCTaGGTAAGCCCAGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: SWRSLLWSSVDSGLSVCRPGSPC*VSPEEV
Trigger: GACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG...TCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCAGGTTCCCTGCTCCTaGGGAGGAACACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCQVPCS*GGTQSE
Trigger: TTCAGATTGTGTTCCTCCCCAGGAGCAGGGAACCTG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTGAGCACACTGCTATaGAAAGGACCCGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTLSTLL*KGPVWP
Trigger: TGGCCACACGGGTCCTTTCCATAGCAGTGTGCTCAG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCATGTCCATCTCAGTTaGAGAAGTGAACGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWHVHLS*RSERPP
Trigger: GGGCGGACGTTCACTTCTTCAACTGAGATGGACATG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAGTTTATCCAGCACGTaGAGGCTTTCTTCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASLSST*RLSSGC
Trigger: ACACCCAGAAGAAAGCCTTCACGTGCTGGATAAACT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGTGCCTGGCCAACTGTaGGTTTATCCAGCACGTGAA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGVPGQL*VYPARE
Trigger: TTCACGTGCTGGATAAACTCACAGTTGGCCAGGCAC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGTGCCTGGCCAACTGTaGGTTTATCCAGCACGTGAA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTVPGQL*VYPARE
Trigger: TTCACGTGCTGGATAAACTCACAGTTGGCCAGGCAC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCTTGTTCTGCAATTCTaGAGGCCTCTCTCAGATTGT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGLVLQF*RPLSDC
Trigger: ACAATCTGAGAGAGGCCTTCAGAATTGCAGAACAAG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCTTGTTCTGCAATTCTaGAGGCCTCTCTCAGATTGT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTLVLQF*RPLSDC
Trigger: ACAATCTGAGAGAGGCCTTCAGAATTGCAGAACAAG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACATGCATTAATCTGGTaGTCGAGGCCATCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGHALIW*SRPSQA
Trigger: AGCCTGGGATGGCCTCGATCACCAGATTAATGCATG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCAGGACTTCCATGTGGTaGTTAAGCTGGTACAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPRTSMW*LSWYRQ
Trigger: CTGCCTGTACCAGCTTAATCACCACATGGAAGTCCT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTTGTTGACTCTTCTGTaGAGGCAGCTCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWLLTLL*RQLFTQ
Trigger: CTGTGTGAAGAGCTGCCTTCACAGAAGAGTCAACAA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCTCTTCACTTCTTGTTaGCTCTTCTGTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPLFTSC*LFCEGS
Trigger: GCTGCCTTCACAGAAGAGTCAACAAGAAGTGAAGAG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTATTCTCAGATGTGGTaGTGGTCCCCTCGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAYSQMW*WSPRFS
Trigger: CGAAAAACGAGGGGACCATCACCACATCTGAGAATA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTGCGATCAGCATCAATaGGATGAAATCCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPCDQHQ*DEIPGW
Trigger: CCATCCAGGGATTTCATCTCATTGATGCTGATCGCA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGACGCAAACCTGGTATaGATCATGTTCTCGAACGTG +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWDANLV*IMFSNV
Trigger: CACGTTCGAGAACATGATTCATACCAGGTTTGCGTC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTCCTCAACCGCTATTTaGTCCACAGGCTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSSTAI*STGLSE
Trigger: TTCTGATAAGCCTGTGGATCAAATAGCGGTTGAGGA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGCACTTTCTGATCTGTaGAAGAATGTCATCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTALSDL*KNVIWE
Trigger: CTCCCAGATGACATTCTTTCACAGATCAGAAAGTGC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTTAAAATTTGGGCATTaGGCCGTCTGCTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLALKFGH*AVCFPE
Trigger: CTCCGGAAAGCAGACGGCTCAATGCCCAAATTTTAA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTTAAAATTTGGGCATTaGGCCGTCTGCTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPLKFGH*AVCFPE
Trigger: CTCCGGAAAGCAGACGGCTCAATGCCCAAATTTTAA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTTCCCAGTTTCTCAGTaGGGTCCTGGATGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGFPVSQ*GPGCVL
Trigger: TAGCACACATCCAGGACCTCACTGAGAAACTGGGAA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCAGTTTCCACAGCCCCTaGGCTTTCAGGAACATTCTG +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSSFHSP*AFRNIL
Trigger: CAGAATGTTCCTGAAAGCTCAGGGGCTGTGGAAACT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCTCTGTGATACTTGCTaGTACTGCTGGAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGLCDTC*YCWKGI
Trigger: GATTCCTTTCCAGCAGTATCAGCAAGTATCACAGAG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCTCTGTGATACTTGCTaGTACTGCTGGAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTLCDTC*YCWKGI
Trigger: GATTCCTTTCCAGCAGTATCAGCAAGTATCACAGAG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGACACTCTGCTCTCTGTaGTACTTGCTGATACTGCTG +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWTLCSL*YLLILL
Trigger: CAGCAGTATCAGCAAGTATCACAGAGAGCAGAGTGT...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGTCATGCTTCCAAAGTaGAGACCAAGACTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCVMLPK*RPRLRR
Trigger: TCGCCTCAGTCTTGGTCTTCACTTTGGAAGCATGAC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGACACTGCTGAGGCACTaGCTGAGGGTCAGGAATAGT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWTLLRH*LRVRNS
Trigger: ACTATTCCTGACCCTCAGTCAGTGCCTCAGCAGTGT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTGCTCCAGGCAGACTTaGAGGTTGTCAAAACATTCA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGCSRQT*RLSKHS
Trigger: TGAATGTTTTGACAACCTTCAAGTCTGCCTGGAGCA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTGTTTTAAGTGGCCATaGGCAAGCTTTTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGCFKWP*ASFSFP
Trigger: TGGGAAGGAAAAGCTTGCTCATGGCCACTTAAAACA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAGTCCTGAGACACATTaGGGGACTGTTCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASPETH*GTVLSS
Trigger: ACTGGAAAGAACAGTCCCTCAATGTGTCTCAGGACT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCAGGAGGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCACACGGAGTCTTCATCTaGAGTTTGATGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: AGGEPPVEPGDPSKHLLAHGVFI*SLMLHI
Trigger: AATGTGGAGCATCAAACTTCAGATGAAGACTCCGTG...TGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCATGTTCAATATCAGGTaGTTGGGCTGTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAMFNIR*LGCQCQ
Trigger: CTGGCACTGACAGCCCAATCACCTGATATTGAACAT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCATGTTCAATATCAGGTaGTTGGGCTGTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPMFNIR*LGCQCQ
Trigger: CTGGCACTGACAGCCCAATCACCTGATATTGAACAT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTTCAATCCAATTCCCTaGAGCTCACTGCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWFNPIP*SSLQRS
Trigger: GGAGCGCTGCAGTGAGCTTCAGGGAATTGGATTGAA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TCCTGCTGTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGGGTGGCTGGTGTCAGTaGGGAAGCGAAACAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SCCGLPFRTRGPSLPPSVGGWCQ*GSETSS
Trigger: AGAACTTGTTTCGCTTCCTCACTGACACCAGCCACC...CACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCACAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTGTCCTGAAGTTGACTaGTTCTCCTACCCACAGACT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPCPEVD*FSYPQT
Trigger: AGTCTGTGGGTAGGAGAATCAGTCAACTTCAGGACA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTTATGGAGGTCCTCGTaGAGCTCTGGAAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGLWRSS*SSGRGS
Trigger: AGATCCTCTTCCAGAGCTTCACGAGGACCTCCATAA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCATTTGTTGCTGGCCTTaGTCAACTGGTCACCCATCT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAICCWP*STGHPS
Trigger: AGATGGGTGACCAGTTGATCAAGGCCAGCAACAAAT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGATCTCAGCTGCTCTTaGTTTGTTGCTGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWDLSCS*FVAGLD
Trigger: ATCAAGGCCAGCAACAAATCAAGAGCAGCTGAGATC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTCCTCTCAGCTGACTTaGGCCAGTCCTCAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSSQLT*ASPQSE
Trigger: CTCGCTTTGAGGACTGGCTCAAGTCAGCTGAGAGGA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CATCCGAAATGGATTTACCTGACAGTGCGCTGTAGTATGGGCCCTCCTCGTCCTTCCGCAGGACGGCTGTaGCCCGCCTCTGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: HPKWIYLTVRCSMGPPRPSAGRL*PASEGC
Trigger: ACAACCTTCAGAGGCGGGTCACAGCCGTCCTGCGGA...AGGACGAGGAGGGCCCATACTACAGCGCACTGTCAGGTAAATCCATTTCGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCTGACTGCTGCTCTGTaGTACCGGCCAGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDLTAAL*YRPVPR
Trigger: ACGGGGGACTGGCCGGTATCACAGAGCAGCAGTCAG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCACAGCAGCAGATTTTaGCTCAACTGGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGHSSRF*LNWWKS
Trigger: GGACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCACAGCAGCAGATTTTaGCTCAACTGGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCHSSRF*LNWWKS
Trigger: GGACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGTGCCTATGAGTTTCTaGACCATTTCTAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGVPMSF*TISRVE
Trigger: TTCCACCCTAGAAATGGTTCAGAAACTCATAGGCAC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTATGGAGATCGTCGATaGCCCAGGAACCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGYGDRR*PRNPVH
Trigger: ATGAACAGGGTTCCTGGGGCATCGACGATCTCCATA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTACTGAGGGAGAAGTGTaGCTGGCCAACTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGTEGEV*LANCEF
Trigger: AAACTCACAGTTGGCCAGGCACACTTCTCCCTCAGT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCACTGAGGGAGAAGTGTaGCTGGCCAACTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPTEGEV*LANCEF
Trigger: AAACTCACAGTTGGCCAGGCACACTTCTCCCTCAGT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTCTGTCAGTTTAGCCTaGAGACAAGAACTACTCCTG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSVSLA*RQELLL
Trigger: CAGGAGTAGTTCTTGTCTGCAGGCTAAACTGACAGA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCAGTCTCAGTAGCTGCTaGAAGGAGTCTTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPSLSSC*KESSSS
Trigger: GGAGCTTGAAGACTCCTTGCAGCAGCTACTGAGACT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAGTCTCAGTAGCTGCTaGAAGGAGTCTTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSLSSC*KESSSS
Trigger: GGAGCTTGAAGACTCCTTGCAGCAGCTACTGAGACT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCTCCTGCTTAGCAGATaGAAGCCTGTTTTCCAAATC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTLLLSR*KPVFQI
Trigger: GATTTGGAAAACAGGCTTGCATCTGCTAAGCAGGAG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCAACATTCCATCTCCTaGTTAGCAGATGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPQHSIS*LADASL
Trigger: CAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCATGCTTTGGTTCCCTaGCCGTTCTTCTGGAGACTT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGHALVP*PFFWRL
Trigger: AAGTCTCCAGAAGAACGGGCAGGGAACCAAAGCATG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGATTCCACAGACTGCTaGCTAGCTAGAATGCCATCA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLADSTDC*LARMPS
Trigger: TGATGGCATTCTAGCTAGGCAGCAGTCTGTGGAATC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAGTGATGCTCTCCACTaGCCTGGTGACTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSDALH*PGDCFF
Trigger: AAAGAAGCAGTCACCAGGGCAGTGGAGAGCATCACT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGAGGTCCTGGATGTGTaGTACTGTGGATTCCAATTC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPEVLDV*YCGFQF
Trigger: GAATTGGAATCCACAGTAGCACACATCCAGGACCTC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTTGACACCAAGGCCTTaGTCTGTTCCAAGCGCTCTA +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPLTPRP*SVPSAL
Trigger: TAGAGCGCTTGGAACAGAGCAAGGCCTTGGTGTCAA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACACCTCTTCCTCGACTaGTGCCAGGTAAGACATGGA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTHLFLD*CQVRHG
Trigger: TCCATGTCTTACCTGGCAGCAGTCGAGGAAGAGGTG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCTGAGGCGATGGCTCTaGCTTCTCATCTCCATTATC +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGLRRWL*LLISII
Trigger: GATAATGGAGATGAGAAGGCAGAGCCATCGCCTCAG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATGTTTCCGGCTCAACTaGCACGTTGGCTTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTCFRLN*HVGLLQ
Trigger: CTGCAACAAGCCAACGTGGCAGTTGAGCCGGAAACA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTGTTCCAGCACCTGCTaGATGTCTGCGTTTAATGTT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGCSSTC*MSAFNV
Trigger: AACATTAAACGCAGACATGCAGCAGGTGCTGGAACA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTGTCTGAAGGTTACTTaGTTCTTGGCGCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWCLKVT*FLAQVF
Trigger: GAAGACCTGCGCCAAGAAGCAAGTAACCTTCAGACA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGCTTCTACAGACAGCTaGAGCCTGAGTGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHASTDS*SLSVLQ
Trigger: CTGGAGCACACTCAGGCTGCAGCTGTCTGTAGAAGC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCAGCTCCACTGTATATaGATCTGCTTTCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTQLHCI*ICFLKL
Trigger: CAGCTTCAGAAAGCAGATGCATATACAGTGGAGCTG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTCACCAGTTCCACCATaGCTTGCAACAAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSPVPP*LATKHL
Trigger: AAGATGCTTTGTTGCAAGGCATGGTGGAACTGGTGA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTTCAGGGACAACCACTaGTCTTCCAGTTTTGCGATC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAFRDNH*SSSFAI
Trigger: GATCGCAAAACTGGAAGAGCAGTGGTTGTCCCTGAA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATGCTTGAGAAGAGCTTaGAGCCTGTGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTCLRRA*SLWSSW
Trigger: CCATGAGCTCCACAGGCTGCAAGCTCTTCTCAAGCA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAATTCCATGTACACGGTaGCACTGGCGGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTIPCTR*HWRFIS
Trigger: GGAGATGAACCGCCAGTGGCACCGTGTACATGGAAT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGGTGGACAGTCTCTCTTCTTGTaGTTCCAGCCAGTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: AAGGTGRPFQTPPGSSGGQSLFL*FQPVVQ
Trigger: TTGAACAACTGGCTGGAAGCACAAGAAGAGAGACTG...TCCACCGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGCTTGCTGTGTTCCATaGAGTACCAGAATCGGATTG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPACCVP*STRIGL
Trigger: CAATCCGATTCTGGTACTGCATGGAACACAGCAAGC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCTTCTGCAACTGGTCTaGAATGGCTTGGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPLLQLV*NGLVHL
Trigger: CAGGTGAACCAAGCCATTGCAGACCAGTTGCAGAAG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAAGACTCTGGGCCTTCTaGAACTGGTCTGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTRLWAF*NWSAMA
Trigger: AGCCATTGCAGACCAGTTGCAGAAGGCCCAGAGTCT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAGACTCTGGGCCTTCTaGAACTGGTCTGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGRLWAF*NWSAMA
Trigger: AGCCATTGCAGACCAGTTGCAGAAGGCCCAGAGTCT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATGGGGGCAGGATCTCTaGCAGGTTGTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTWGQDL*QVVSRH
Trigger: ATGTCTGGAAACAACCTGGCAGAGATCCTGCCCCCA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTTCTGCACATCATGCTaGAGCTCCTTTATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAFCTSC*SSFMSC
Trigger: GCAGGACATAAAGGAGCTGCAGCATGATGTGCAGAA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCCCTGGACAGCATTCTaGCACCGATCCGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHPWTAF*HRSVSF
Trigger: AAAGCTGACGGATCGGTGGCAGAATGCTGTCCAGGG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCATCCGAAATGGTGAAATCTTGCCACTaGCTCACCAGCCCATCAACG +
Preference number: 4 (lower is better)
Translates to: CSGQEGLSGTCHEWPSEMVKSCH*LTSPST
Trigger: CGTTGATGGGCTGGTGAGGCAGTGGCAAGATTTCAC...CATTTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGAAGTAGTGAAATCTTaGCACTGCCTCACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSEVVKS*HCLTSP
Trigger: TGGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCACAGTGCTCTGGAACTaGTTAATCATCTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLATVLWN*LIISAS
Trigger: GCTGGCAGAGATGATTAAGCAGTTCCAGAGCACTGT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCACCAGGTGCGAAGGTTaGTCATGTTTTTGTCCAACT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTTRCEG*SCFCPT
Trigger: AGTTGGACAAAAACATGAGCAACCTTCGCACCTGGT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTTCGAGCCAACCAGGTaGGAAGGTTGCTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWFEPTR*EGCSCF
Trigger: AAAACATGAGCAACCTTCGCACCTGGTTGGCTCGAA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCGCTGTAGATCCTGCTaGTCAGCGAGCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQRCRSC*SASLFW
Trigger: CCAGAAGAGGCTCGCTGAGCAGCAGGATCTACAGCG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCTCCTCGATTTTCATaGGCCGCTCCATGGACATGG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSPRFS*AAPWTW
Trigger: CCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCATCCGAAATGTCTCCTCGATTTTCATaGGCCGCTCCATGGACATGG +
Preference number: 4 (lower is better)
Translates to: CSGQEGLSGTCHEWPSEMSPRFS*AAPWTW
Trigger: CCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGA...CATTTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGAATGCTCTCCCTGGTaGCCTCAAATTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCECSPW*PQILPS
Trigger: AGAGGGAAGAATTTGAGGGCACCAGGGAGAGCATTC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATCCACGTTGGTCAGCTaGAGGTCCATCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASTLVS*RSISVS
Trigger: GCTCACAGAGATGGACCTGCAGCTGACCAACGTGGA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTCACTCTCTGAGAAGTaGTCCACGTTGGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWSLSEK*STLVSC
Trigger: GCAGCTGACCAACGTGGAGCACTTCTCAGAGAGTGA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCTCGCGGGCCTTCTTTaGCACCATCCGTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDLAGLL*HHPCLE
Trigger: CTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGCTTTCAGTATCTCCTaGAGTCTCTTCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTAFSIS*SLFTLS
Trigger: ACTGAGAGTGAAGAGACTGCAGGAGATACTGAAAGC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATGGAAGTCCTGGCACTaGATGAGCGACTGTCGTAAG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGWKSWH*MSDCRK
Trigger: CTTACGACAGTCGCTCATGCAGTGCCAGGACTTCCA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCAGCTCCTTTTCCAGTTaGATTAGTTCCCTCCGACAC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSSFSS*ISSLRH
Trigger: GTGTCGGAGGGAACTAATGCAACTGGAAAAGGAGCT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAGCCCAGAAGAAGTCTaGACAGGTCCCGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSPEEV*TGPGTL
Trigger: CAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAATACCCGGGGCACCTaGCACACAGGTTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSNTRGT*HTGSLL
Trigger: GAGCAGGGAACCTGTGTGGCAGGTGCCCCGGGTATT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTTCTGTAGTTCTCACTaGTCTGAACTTTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAFCSSH*SELCSG
Trigger: CCCCGAGCAAAGTTCAGAGCAGTGAGAACTACAGAA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGCTGACCTGAGCAGATaGTTGAGAAGAGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTADLSR*LRRACS
Trigger: GCTGCAAGCTCTTCTCAAGCATCTGCTCAGGTCAGC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAGGGAGAAGTGTGCCTaGCCAACTGTGAGTTTATCC +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGREKCA*PTVSLS
Trigger: GGATAAACTCACAGTTGGCCAGGCACACTTCTCCCT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAACATCCACATCTTCTaGTTCCAGCAATCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTNIHIF*FQQSGD
Trigger: ATCCCCAGATTGCTGGAACCAGAAGATGTGGATGTT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGATGAAATCCCTGGATaGCCATTTTATGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTDEIPG*PFYGEA
Trigger: TGCCTCTCCATAAAATGGCCATCCAGGGATTTCATC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCCGATGTTTCACAGCTaGAACAGTAGGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTPMFHS*NSRILK
Trigger: CTTAAGGATCCTACTGTTCCAGCTGTGAAACATCGG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTCCCGATCTGGGTCTTaGCTTGGTCGAGATCCTCCC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSRSGS*LGRDPP
Trigger: GGGAGGATCTCGACCAAGCCAAGACCCAGATCGGGA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTTTCTATGGTCATCCTaGAGTCTCAGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPFLWSS*SLSSCC
Trigger: GCAGCAGCTACTGAGACTCCAGGATGACCATAGAAA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTTCCTCAGGTTTCTATaGTCATCCTGGAGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGFLRFL*SSWSLS
Trigger: ACTGAGACTCCAGGATGACCATAGAAACCTGAGGAA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAGCTCTGGTCCTCTGTaGGTAGTAACTTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSSGPL*VVTYPL
Trigger: AAGAGGATAAGTTACTACCCACAGAGGACCAGAGCT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAAGGCAATCATGCTTTaGTTCCCTGCCCGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAKAIML*FPARSS
Trigger: AGAAGAACGGGCAGGGAACCAAAGCATGATTGCCTT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCCATGCTTGGTAGCCTaGAGGTCAGTGGTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHPCLVA*RSVVKA
Trigger: TGCCTTGACCACTGACCTCCAGGCTACCAAGCATGG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTTAGTTCAGCTTCCGTaGCAGCTGTCTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHLVQLP*QLSPPW
Trigger: CCAGGGTGGAGACAGCTGCCACGGAAGCTGAACTAA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGGCAACGAGGACATaGACTGTCCAAGAACTGTCT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGVATRT*TVQELS
Trigger: AGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCAC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTTCTCTGTAAGACAGTaGCAACGAGGACATGGACTG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAFSVRQ*QRGHGL
Trigger: CAGTCCATGTCCTCGTTGCCACTGTCTTACAGAGAA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCTGCATTCTTCCACCTaGGATTCAATCTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGLHSST*DSISAG
Trigger: CCCTGCAGAGATTGAATCCCAGGTGGAAGAATGCAG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTTCTTGAGCCTGTCCTaGGTCCTGTTCAACAATGTC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWFLSLS*VLFNNV
Trigger: GACATTGTTGAACAGGACCCAGGACAGGCTCAAGAA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGGTTTCATTCCTGTTTaGGGCAACCTCAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAGFIPV*GNLSST
Trigger: AGTGGAACTGAGGTTGCCCCAAACAGGAATGAAACC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGAAGGTTTAGTACGGTaGCCTTCAAGTCCACCAACA +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPEGLVR*PSSPPT
Trigger: TGTTGGTGGACTTGAAGGCCACCGTACTAAACCTTC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGAAGGTTTAGTACGGTaGCCTTCAAGTCCACCAACA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAEGLVR*PSSPPT
Trigger: TGTTGGTGGACTTGAAGGCCACCGTACTAAACCTTC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACCAAGACTGAGGCGATaGCTCTGCCTTCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAPRLRR*LCLLIS
Trigger: GGAGATGAGAAGGCAGAGCCATCGCCTCAGTCTTGG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCCTCTTCTGTTTGGTTaGGCCTTAGGGAACATTCTG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAPLLFG*ALGNIL
Trigger: CAGAATGTTCCCTAAGGCCCAACCAAACAGAAGAGG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGTGCCCTCTTCTGTTTaGTTGGGCCTTAGGGAACAT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSVPSSV*LGLREH
Trigger: ATGTTCCCTAAGGCCCAACCAAACAGAAGAGGGCAC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACAGCCTCATGTTGAGTaGCTCCATTATCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGQPHVE*LHYLPG
Trigger: GCCTGGGAGATAATGGAGCCACTCAACATGAGGCTG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTCAGGGCTGGATGCCTaGTTGCTTGCAGATGATTCC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWSGLDA*LLADDS
Trigger: GGAATCATCTGCAAGCAACCAGGCATCCAGCCCTGA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGAGGTTACTTGCTTCTTaGCGCAGGTCTTCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWRLLAS*RRSSSW
Trigger: CCAACTTGAAGACCTGCGCCAAGAAGCAAGTAACCT...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAGCCTGTGGAGCTCATaGTCAATTTTCTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSLWSS*SIFLFR
Trigger: CCTGAACAAGAAAATTGACCATGAGCTCCACAGGCT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATGGGCCTTCTGCAACTaGTCTGCAATGGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTWAFCN*SAMAWF
Trigger: GAACCAAGCCATTGCAGACCAGTTGCAGAAGGCCCA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTGGGCCTTCTGCAACTaGTCTGCAATGGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWWAFCN*SAMAWF
Trigger: GAACCAAGCCATTGCAGACCAGTTGCAGAAGGCCCA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCAGCTACGTCACTAAGTaGGAGCTTGAGGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPSYVTK*ELEAHF
Trigger: GAAGTGAGCCTCAAGCTCCCACTTAGTGACGTAGCT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGCCTGGAGGAGCTACGTCACTAAGTaGGAGCTTGAGGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: WVAIQDSRAFFATIRAWRSYVTK*ELEAHF
Trigger: GAAGTGAGCCTCAAGCTCCCACTTAGTGACGTAGCT...CCTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCATCATCTCTGCCAGCTaGGGCTCCATGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LVVMLGTGRAVGNMPRVAIISAS*GSMSFQ
Trigger: CTGGAAAGACATGGAGCCCCAGCTGGCAGAGATGAT...GGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGATCATCTCTGCCAGCTaGGGCTCCATGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWIISAS*GSMSFQ
Trigger: CTGGAAAGACATGGAGCCCCAGCTGGCAGAGATGAT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCTGGCCTTGATCAACTaGTCACCCATCTGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLALALIN*SPICFN
Trigger: GTTAAAGCAGATGGGTGACCAGTTGATCAAGGCCAG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGCCTGTCCAGGCTCCTGGTaGTCTGCTGGATCGAGTCAC +
Preference number: 4 (lower is better)
Translates to: FSSCISSLRHSRRARGSACPGSW*SAGSSH
Trigger: GTGACTCGATCCAGCAGACCACCAGGAGCCTGGACA...GGCAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATCATGCGCCGCTCCATaGACATGGCACAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSCAAP*TWHKCS
Trigger: GGAACATTTGTGCCATGTCCATGGAGCGGCGCATGA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCATGCGCCGCTCCATaGACATGGCACAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSCAAP*TWHKCS
Trigger: GGAACATTTGTGCCATGTCCATGGAGCGGCGCATGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGTCTTCAGTTCCTCTTTaGCACTCGTGTACAACACCT +
Preference number: 4 (lower is better)
Translates to: GEPPVEPGDPSKHLLAVASSVPL*HSCTTP
Trigger: AGGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGA...CGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACCAGAATGCTCTCCCTaGTGCCCTCAAATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTPECSP*CPQILP
Trigger: GGGAAGAATTTGAGGGCACCAGGGAGAGCATTCTGG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAAGAAGTGCTCCACGTTaGTCAGCTGCAGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTRSAPR*SAAGPS
Trigger: AGATGGACCTGCAGCTGACCAACGTGGAGCACTTCT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAGAAGTGCTCCACGTTaGTCAGCTGCAGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWRSAPR*SAAGPS
Trigger: AGATGGACCTGCAGCTGACCAACGTGGAGCACTTCT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCAGTGCGCTGTAGTATaGGCCCTCCTCGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQQCAVV*ALLVLF
Trigger: GAAGAGGACGAGGAGGGCCCATACTACAGCGCACTG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGTTTATAAGGGGTGCTaGACGCAGGGGGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAVYKGC*TQGEQV
Trigger: CACCTGTTCCCCCTGCGTCCAGCACCCCTTATAAAC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTACTTTGGAGCTCTGTaGATTCGGGGCTCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCYFGAL*IRGSRF
Trigger: AAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATGGCGGAGTCTACTTTaGAGCTCTGTGGATTCGGGG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAWRSLL*SSVDSG
Trigger: CCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAAACTGGTGGAAGTCCTaGCACTGCATGAGCGACTGT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTNWWKS*HCMSDC
Trigger: ACAGTCGCTCATGCAGTGCCAGGACTTCCACCAGTT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAACCGGGCAAAGTTGTTaGCCTGAGTGCAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTTGQSC*PECSCS
Trigger: ACTACAGCTGCACTCAGGCCAACAACTTTGCCCGGT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCTGGTGTACCTCAGCATaGGGTAAAAGGACCGGGCAA +
Preference number: 4 (lower is better)
Translates to: ACSDARDRKGCREHATSGWCTSA*GKRTGQ
Trigger: TTGCCCGGTCCTTTTACCCCATGCTGAGGTACACCA...GCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGAACCATTTCTAGGGTaGAATGTCCTCGCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPEPFLG*NVLACF
Trigger: GAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAGTGGCCATCCGAAATaGATTTACCAGAAGACGCTT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSGHPK*IYQKTL
Trigger: AAGCGTCTTCTGGTAAATCCATTTCGGATGGCCACT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358025.7
ENST00000458046.6
ENST00000555002.6
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCTGTTCAGCTTGCAATaGAATATGGAGATCGTCGAT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGLFSLQ*NMEIVD
Trigger: ATCGACGATCTCCATATTTCATTGCAAGCTGAACAG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCTTGTTCTGCAATTCTaGAGGCCTCTCTCAGATTGT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPLVLQF*RPLSDC
Trigger: ACAATCTGAGAGAGGCCTTCAGAATTGCAGAACAAG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCTTCCATCTTCAGCCTaGTGTCCAAATCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWLPSSA*CPNLVK
Trigger: TTTCACCAGATTTGGACATCAGGCTGAAGATGGAAG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCTTCCATCTTCAGCCTaGTGTCCAAATCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPLPSSA*CPNLVK
Trigger: TTTCACCAGATTTGGACATCAGGCTGAAGATGGAAG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCCTTGTGTTTTGAAATaGGTTCACCGGGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWPCVLK*VHRGSL
Trigger: GAGAGAGCCCCGGTGAACTCATTTCAAAACACAAGG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAGGACTTCCATGTGGTaGTTAAGCTGGTACAGGCAG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGRTSMW*LSWYRQ
Trigger: CTGCCTGTACCAGCTTAATCACCACATGGAAGTCCT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTTGTTGACTCTTCTGTaGAGGCAGCTCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGLLTLL*RQLFTQ
Trigger: CTGTGTGAAGAGCTGCCTTCACAGAAGAGTCAACAA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTATTCTCAGATGTGGTaGTGGTCCCCTCGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGYSQMW*WSPRFS
Trigger: CGAAAAACGAGGGGACCATCACCACATCTGAGAATA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTATTCTCAGATGTGGTaGTGGTCCCCTCGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPYSQMW*WSPRFS
Trigger: CGAAAAACGAGGGGACCATCACCACATCTGAGAATA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTGCGATCAGCATCAATaGGATGAAATCCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGCDQHQ*DEIPGW
Trigger: CCATCCAGGGATTTCATCTCATTGATGCTGATCGCA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTGCGATCAGCATCAATaGGATGAAATCCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPCDQHQ*DEIPGW
Trigger: CCATCCAGGGATTTCATCTCATTGATGCTGATCGCA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGTCAGTGAGGGTCTTCTaGACCAGCGGGGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKESVRVF*TSGASL
Trigger: CAGCGAGGCCCCGCTGGTTCAGAAGACCCTCACTGA...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGACGCAAACCTGGTATaGATCATGTTCTCGAACGTG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGDANLV*IMFSNV
Trigger: CACGTTCGAGAACATGATTCATACCAGGTTTGCGTC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAGCCATTTCCACAGCTaGATCCTTGTTTATTTCCCA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSHFHS*ILVYFP
Trigger: TGGGAAATAAACAAGGATTCAGCTGTGGAAATGGCT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCAACAAGGCTTTCATTaGAGATTCAACTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGQQGFH*RFNCSK
Trigger: CTTGCTGCAGTTGAATCTTCAATGAAAGCCTTGTTG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCAACAAGGCTTTCATTaGAGATTCAACTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTQQGFH*RFNCSK
Trigger: CTTGCTGCAGTTGAATCTTCAATGAAAGCCTTGTTG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCACCAGCATTTGGTATTaGTTCCGTAAGTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPTSIWY*FRKSSR
Trigger: CCTAGAGGACTTACGGAATCAATACCAAATGCTGGT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTCTCCACTGCCCTGGTaGCTGCTTCTTTATAGCGTG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSPLPW*LLLYSV
Trigger: CACGCTATAAAGAAGCAGTCACCAGGGCAGTGGAGA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATCTCCACTGCCCTGGTaGCTGCTTCTTTATAGCGTG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASPLPW*LLLYSV
Trigger: CACGCTATAAAGAAGCAGTCACCAGGGCAGTGGAGA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGAGCCGACACAATCTTaGGCAAACATATGCCATCAT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAEPTQS*ANICHH
Trigger: ATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTACACTCTGCTCTCTGTaGTACTTGCTGATACTGCTG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGTLCSL*YLLILL
Trigger: CAGCAGTATCAGCAAGTATCACAGAGAGCAGAGTGT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAACAGTGCTAGCATGGTaGCTCAGTGTCCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTTVLAW*LSVLKE
Trigger: CTCTTTGAGGACACTGAGTCACCATGCTAGCACTGT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGTCATGCTTCCAAAGTaGAGACCAAGACTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTVMLPK*RPRLRR
Trigger: TCGCCTCAGTCTTGGTCTTCACTTTGGAAGCATGAC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTTAGTGAGTCTGGTGTaGGGATTTGTGCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLALVSLV*GFVPWN
Trigger: ATTCCATGGCACAAATCCTCACACCAGACTCACTAA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTTATCTCCCAGGCCCTaGTCTTTGCAAGTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPLSPRP*SLQVSN
Trigger: GTTAGAGACTTGCAAAGATCAGGGCCTGGGAGATAA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGCTTCAGCCTCATGTTaGGTGGCTCCATTATCTCCC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAASASC*VAPLSP
Trigger: GGGAGATAATGGAGCCACTCAACATGAGGCTGAAGC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTATGCATCTGCTTTCTaGAGCTGTTCAGCAACACTC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPYASAF*SCSATL
Trigger: GAGTGTTGCTGAACAGCTTCAGAAAGCAGATGCATA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCACGGAGTCTTCATCTaGAGTTTGATGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPHGVFI*SLMLHI
Trigger: AATGTGGAGCATCAAACTTCAGATGAAGACTCCGTG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCACAGGTGCTTAGCTaGAGTAATGACTGGTTAACG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSQVLS*SNDWLT
Trigger: CGTTAACCAGTCATTACTTCAGCTAAGCACCTGTGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCATCTTGCAGAGACTaGAGGTTCTCCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSSCRD*RFSTWH
Trigger: ATGCCAGGTGGAGAACCTTCAGTCTCTGCAAGATGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCATGTTTGCGAGCTGTTaGAACTTTGCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSMFASC*NFASCC
Trigger: GCAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACAT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCATGTTCAATATCAGGTaGTTGGGCTGTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSMFNIR*LGCQCQ
Trigger: CTGGCACTGACAGCCCAATCACCTGATATTGAACAT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGTTGTAAGGACTGGGTaGCATAGGAATCAGCAATTG +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWVVRTG*HRNQQL
Trigger: CAATTGCTGATTCCTATGTCACCCAGTCCTTACAAC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGCTGCAGGGGTAGGGCTGCCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCCCGATCCGTCAGCTTTaGGAATTCTGTAATAAATTC +
Preference number: 4 (lower is better)
Translates to: SCRGRAARTTLERKERCGPIRQL*EFCNKF
Trigger: GAATTTATTACAGAATTCTCAAAGCTGACGGATCGG...GCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAGCCCTACCCCTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTTATGGAGGTCCTCGTaGAGCTCTGGAAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWLWRSS*SSGRGS
Trigger: AGATCCTCTTCCAGAGCTTCACGAGGACCTCCATAA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCATTTGTTGCTGGCCTTaGTCAACTGGTCACCCATCT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSICCWP*STGHPS
Trigger: AGATGGGTGACCAGTTGATCAAGGCCAGCAACAAAT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGATCTCAGCTGCTCTTaGTTTGTTGCTGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGDLSCS*FVAGLD
Trigger: ATCAAGGCCAGCAACAAATCAAGAGCAGCTGAGATC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCACCCTTGATCCGATaGCATCAAAAAGATGTTGCC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSPLIR*HQKDVA
Trigger: GGCAACATCTTTTTGATGTCATCGGATCAAGGGTGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTCACCCTTGATCCGATaGCATCAAAAAGATGTTGCC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWSPLIR*HQKDVA
Trigger: GGCAACATCTTTTTGATGTCATCGGATCAAGGGTGA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGCTCCCCAAACACAATaGGCTGATCAATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGAPQTQ*ADQSCW
Trigger: CCAACAAGATTGATCAGCTCATTGTGTTTGGGGAGC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGCTCCCCAAACACAATaGGCTGATCAATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCAPQTQ*ADQSCW
Trigger: CCAACAAGATTGATCAGCTCATTGTGTTTGGGGAGC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CACCTTCCATTTGCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATCAGGGACTGAGGAGATaGCGGTTCCTCGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: HLPFACSDARDRKGCREHQGLRR*RFLALS
Trigger: GGAGAGAGCGAGGAACCGTCATCTCCTCAGTCCCTG...ATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGCAAATGGAAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CCTTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGTCTGTCGAAGGCACCTaGCTGCTGCTCTGTGATACC +
Preference number: 4 (lower is better)
Translates to: PFPVALVPSDTLGEPGGLSVEGT*LLLCDT
Trigger: GGTATCACAGAGCAGCAGTCAGGTGCCTTCGACAGA...CAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACCTTGCTGCTCACGTTaGCAGAGACCACTAATGCCT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAPCCSR*QRPLMP
Trigger: AGGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCCTTGCTGCTCACGTTaGCAGAGACCACTAATGCCT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHPCCSR*QRPLMP
Trigger: AGGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGTGCCTATGAGTTTCTaGACCATTTCTAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWVPMSF*TISRVE
Trigger: TTCCACCCTAGAAATGGTTCAGAAACTCATAGGCAC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGTTGTTCAAAACATCTaGGCACACTGCTATGGAAAG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGVVQNI*AHCYGK
Trigger: CTTTCCATAGCAGTGTGCTCAGATGTTTTGAACAAC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATCCCGAGGCAACTGTTaGCCAGAAAGTACTTCTAGC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSRGNC*PESTSS
Trigger: GCTAGAAGTACTTTCTGGGCAACAGTTGCCTCGGGA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGATACTGCAGAAACTGTaGCACATAGGTCATGATGGA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGILQKL*HIGHDG
Trigger: TCCATCATGACCTATGTGGCACAGTTTCTGCAGTAT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGATTTGGCTTCTaGCTCCCAGATTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLANRFGF*LPDFHL
Trigger: CAAGTGGAAATCTGGGAGGCAGAAGCCAAATCTGTT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCTGTCAGTTTAGCCTaGAGACAAGAACTACTCCTG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSVSLA*RQELLL
Trigger: CAGGAGTAGTTCTTGTCTGCAGGCTAAACTGACAGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGATGCTTCTTCACATaGTTCAGTACGCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCRCFFT*FSTLST
Trigger: GGTGGACAGCGTACTGAAGCATGTGAAGAAGCATCT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAGTCTCAGTAGCTGCTaGAAGGAGTCTTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWSLSSC*KESSSS
Trigger: GGAGCTTGAAGACTCCTTGCAGCAGCTACTGAGACT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAGTTCCTGCAGTTTCTaGAATTTTTCCTCAACCGCT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSSCSF*NFSSTA
Trigger: AGCGGTTGAGGAAAAATTGCAGAAACTGCAGGAACT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCAGTGGCTTAATGGCTaGTTTCTTTGCTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWQWLNG*FLCFQL
Trigger: CAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCAATTCCTTCTGAGATaGCTCCAAAGTAACATGGTG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGQFLLR*LQSNMV
Trigger: CACCATGTTACTTTGGAGGCATCTCAGAAGGAATTG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCGAGGTCCTGGATGTGTaGTACTGTGGATTCCAATTC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPEVLDV*YCGFQF
Trigger: GAATTGGAATCCACAGTAGCACACATCCAGGACCTC...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTGCCTCAGTTTCCTGTaGTTTGAAAGCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTCLSFL*FESFLH
Trigger: ATGAAGGAAGCTTTCAAAGCACAGGAAACTGAGGCA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACAAATTTCCATTCCTaGTTCAGTTCTTCGCACCAC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGTNFHS*FSSSHH
Trigger: GTGGTGCGAAGAACTGAAGCAGGAATGGAAATTTGT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTCCTCTGTGGTGGCTaGCTCTTTTGTTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTFLCGG*LFCFGN
Trigger: ATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTGGTGTGAGGATTTGTaGCATGGAATTATCAGAGGT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGWCEDL*HGIIRG
Trigger: ACCTCTGATAATTCCATGGCACAAATCCTCACACCA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCGGCCACCTGGGTCTTaGAGGCATGCAGGACTTCTG +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDRPPGS*RHAGLL
Trigger: CAGAAGTCCTGCATGCCTGCAAGACCCAGGTGGCCG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTTTCATTCTGGTAACTaGGGTTGTAATCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAFHSGN*GCNRGQ
Trigger: CTGGCCTCGATTACAACCGCAGTTACCAGAATGAAA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCACCAGTTCCACCATaGCTTGCAACAAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSPVPP*LATKHL
Trigger: AAGATGCTTTGTTGCAAGGCATGGTGGAACTGGTGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTACGCCACCAACTGTTTaGCTTCGTTCAGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGTPPTV*LRSEFG
Trigger: ACCAAACTCTGAACGAAGGCAAACAGTTGGTGGCGT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCACGCCACCAACTGTTTaGCTTCGTTCAGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPTPPTV*LRSEFG
Trigger: ACCAAACTCTGAACGAAGGCAAACAGTTGGTGGCGT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTGCTTGAGAAGAGCTTaGAGCCTGTGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHCLRRA*SLWSSW
Trigger: CCATGAGCTCCACAGGCTGCAAGCTCTTCTCAAGCA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGCAGAACTTGGTGAATaGACGGAGTCTTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWAELGE*TESSSE
Trigger: TTCAGATGAAGACTCCGTGCATTCACCAAGTTCTGC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACTCCCCCAGGTGCTCTaGAAACTCCGTTCTTTCATA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGLPQVL*KLRSFI
Trigger: TATGAAAGAACGGAGTTTGCAGAGCACCTGGGGGAG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATTCCATGTACACGGTaGCACTGGCGGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAIPCTR*HWRFIS
Trigger: GGAGATGAACCGCCAGTGGCACCGTGTACATGGAAT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCAGTCTCTCTTCTTGTaGTTCCAGCCAGTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWQSLFL*FQPVVQ
Trigger: TTGAACAACTGGCTGGAAGCACAAGAAGAGAGACTG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCATAACACCACAGGCTTaGTGTGTTCCATGCAGTACC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPITPQA*CVPCST
Trigger: GGTACTGCATGGAACACAGCAAGCCTGTGGTGTTAT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATGGGGGCAGGATCTCTaGCAGGTTGTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAWGQDL*QVVSRH
Trigger: ATGTCTGGAAACAACCTGGCAGAGATCCTGCCCCCA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGCTCCTTTATGTCCTaGAGGGCTGGGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSSFMS*RAGGRI
Trigger: GATCCTGCCCCCAGCCCTGCAGGACATAAAGGAGCT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGTTTTCTGCACATCATaGTGCAGCTCCTTTATGTCC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPVFCTS*CSSFMS
Trigger: GGACATAAAGGAGCTGCAGCATGATGTGCAGAAAAC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGTGGCCCGAATCCATTaGCGGTTCATATTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPVARIH*RFIFCN
Trigger: GTTACAAAATATGAACCGGCAATGGATTCGGGCCAC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGCCCCCTGGACAGCATTCTaGCACCGATCCGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: FSSCISSLRHSRRARGSAPWTAF*HRSVSF
Trigger: AAAGCTGACGGATCGGTGGCAGAATGCTGTCCAGGG...GGCAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp AGCTGGCGGAGTCTACTTTGGAGCTCTGTGGATTCGGGGCTCTCGGTTTGCAGATCTTCCACGAGAACGTaGCGGGTTAAGTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SWRSLLWSSVDSGLSVCRSSTRT*RVKSAF
Trigger: GAAGGCGGACTTAACCCGGCACGTTCTCGTGGAAGA...TCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATCGTCTAAAAACTTCTaGCACAGGCGCCACGTCTCC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASSKNF*HRRHVS
Trigger: GGAGACGTGGCGCCTGTGGCAGAAGTTTTTAGACGA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CATCCGAAATGGATTTACCTGACAGTGCGCTGTAGTATGGGCCCTCCTCGTCCTGCCAGCCGCCGGTACTaGTTGTTGATGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HPKWIYLTVRCSMGPPRPASRRY*LLMSSS
Trigger: GCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGC...AGGACGAGGAGGGCCCATACTACAGCGCACTGTCAGGTAAATCCATTTCGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTCACTCTCTGAGAAGTaGTCCACGTTGGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSLSEK*STLVSC
Trigger: GCAGCTGACCAACGTGGAGCACTTCTCAGAGAGTGA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATCACTCTCTGAGAAGTaGTCCACGTTGGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASLSEK*STLVSC
Trigger: GCAGCTGACCAACGTGGAGCACTTCTCAGAGAGTGA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCTTTGCCACCATCCGTaGCTGGAGGTAATAGTAGCT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWLCHHP*LEVIVA
Trigger: AGCTACTATTACCTCCAGGCACGGATGGTGGCAAAG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCTTCCTGCTGTGGGTTaGCATTCAGGACTCGCGGGC +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDLPAVG*HSGLAG
Trigger: GCCCGCGAGTCCTGAATGGCAACCCACAGCAGGAAG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGTCCCCCGTCTTCCTaGTGTGGGTTGCCATTCAGG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSPPSS*CGLPFR
Trigger: CCTGAATGGCAACCCACAGCAGGAAGACGGGGGACT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATGGAAGTCCTGGCACTaGATGAGCGACTGTCGTAAG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAWKSWH*MSDCRK
Trigger: CTTACGACAGTCGCTCATGCAGTGCCAGGACTTCCA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCAGCTCCTTTTCCAGTTaGATTAGTTCCCTCCGACAC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPSSFSS*ISSLRH
Trigger: GTGTCGGAGGGAACTAATGCAACTGGAAAAGGAGCT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCAGGAGGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAAAATCTTGGGACACTTaGTCCCGTAACTGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: AGGEPPVEPGDPSKHLLAKSWDT*SRNCLS
Trigger: ACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTT...TGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAGTTGTTGGCCTGAGTaGAGCTGTAGTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSCWPE*SCSLLR
Trigger: CCGAAGAAGACTACAGCTGCACTCAGGCCAACAACT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCCAGAATTCACAAAGTaGTTGGCTCTTCAGGAAACT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTPEFTK*LALQET
Trigger: AGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTGTGATGGACACCACTaGTCATTGACCATACCTACA +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPCDGHH*SLTIPT
Trigger: TGTAGGTATGGTCAATGAGCAGTGGTGTCCATCACA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTTCTGTAGTTCTCACTaGTCTGAACTTTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCFCSSH*SELCSG
Trigger: CCCCGAGCAAAGTTCAGAGCAGTGAGAACTACAGAA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAGGGAGAAGTGTGCCTaGCCAACTGTGAGTTTATCC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGREKCA*PTVSLS
Trigger: GGATAAACTCACAGTTGGCCAGGCACACTTCTCCCT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGAACATCCACATCTTCTaGTTCCAGCAATCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWNIHIF*FQQSGD
Trigger: ATCCCCAGATTGCTGGAACCAGAAGATGTGGATGTT...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATGGATGGCCATTTTATaGAGAGGCAGGTCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAWMAIL*RGRSEP
Trigger: TGGCTCGGACCTGCCTCTCCATAAAATGGCCATCCA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTCAGTCATCCCGATCTaGGTCTTGGCTTGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSVIPI*VLAWSR
Trigger: TCTCGACCAAGCCAAGACCCAGATCGGGATGACTGA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTTTCTATGGTCATCCTaGAGTCTCAGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPFLWSS*SLSSCC
Trigger: GCAGCAGCTACTGAGACTCCAGGATGACCATAGAAA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAGTGTGTTGTCCCACTaGTTGCTGATGTCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSVLSH*LLMSVR
Trigger: CCTCACTGACATCAGCAACCAGTGGGACAACACACT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCGTTACACTGTCCAGTaGTCCTACTTTAAGACTTTC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTRYTVQ*SYFKTF
Trigger: GAAAGTCTTAAAGTAGGACCACTGGACAGTGTAACG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGAGTTCCTCTGTGGTaGCTGCCTCTTTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCRVPLW*LPLLFW
Trigger: CCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGTGCCCTCTTCTGTTTaGTTGGGCCTTAGGGAACAT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGVPSSV*LGLREH
Trigger: ATGTTCCCTAAGGCCCAACCAAACAGAAGAGGGCAC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCACTTATCTCCATTTTaGCCCTGGGGTGACAAGATC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCHLSPF*PWGDKI
Trigger: GATCTTGTCACCCCAGGGCCAAAATGGAGATAAGTG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGAATACCCATATTTGTaGAAACCTGAGGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGEYPYL*KPEAPQ
Trigger: TTGTGGAGCCTCAGGTTTCCACAAATATGGGTATTC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGAGCTTGCAGCCTGTaGAGCTCATGGTCAATTTTC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCRACSL*SSWSIF
Trigger: GAAAATTGACCATGAGCTCCACAGGCTGCAAGCTCT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGTACACGGTGCCACTaGCGGTTCATCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDCTRCH*RFISPR
Trigger: CCTGGGGGAGATGAACCGCCAGTGGCACCGTGTACA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATTGCCGATAACCTCCTaGAGTTTCTCCCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTLPITS*SFSQLP
Trigger: AGGGAGTTGGGAGAAACTCCAGGAGGTTATCGGCAA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGCAACTGGTCTGCAATaGCTTGGTTCACCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAATGLQ*LGSPES
Trigger: GGACTCAGGTGAACCAAGCCATTGCAGACCAGTTGC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGTCGATCCAGGACACTaGAATTTTGGAGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAVDPGH*NFGERL
Trigger: AAGCCTTTCTCCAAAATTCCAGTGTCCTGGATCGAC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTCAATATCAGGTGATTaGGCTGTCAGTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSISGD*AVSAST
Trigger: TGTGCTGGCACTGACAGCCCAATCACCTGATATTGA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAAGCTACGTCACTAAGTaGGAGCTTGAGGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSYVTK*ELEAHF
Trigger: GAAGTGAGCCTCAAGCTCCCACTTAGTGACGTAGCT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGGCCACTAGATGACACAGGGACTGAGGAGATGACGGTTCCTCGCTCTCTCCCCAGCTACGTCACTAAGTaGGAGCTTGAGGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: GPLDDTGTEEMTVPRSLPSYVTK*ELEAHF
Trigger: GAAGTGAGCCTCAAGCTCCCACTTAGTGACGTAGCT...GGGGAGAGAGCGAGGAACCGTCATCTCCTCAGTCCCTGTGTCATCTAGTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTGGGTTTATTCTTCAGCTCATaGATCAGACTTCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: EAGPPSLPRRSWAGVRLGLFFSS*IRLLVW
Trigger: CCAAACCAGAAGTCTGATCCATGAGCTGAAGAATAA...ACCCAGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGTCCTCGTGAAGCTCTaGAAGAGGATCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCVLVKL*KRIFTL
Trigger: CAAAGTGAAGATCCTCTTCCAGAGCTTCACGAGGAC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTCTCCTGTTTACGTATaGCCACCCTTAAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCSPVYV*PPLSRG
Trigger: ACCTCTGCTTAAGGGTGGCCATACGTAAACAGGAGA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCTGGCCTTGATCAACTaGTCACCCATCTGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCLALIN*SPICFN
Trigger: GTTAAAGCAGATGGGTGACCAGTTGATCAAGGCCAG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATGTCCAGGCTCCTGGTaGTCTGCTGGATCGAGTCAC +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSCPGSW*SAGSSH
Trigger: GTGACTCGATCCAGCAGACCACCAGGAGCCTGGACA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTCTTCAGTTCCTCTTTaGCACTCGTGTACAACACCT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWSSVPL*HSCTTP
Trigger: AGGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCTTCAGTTCCTCTTTaGCACTCGTGTACAACACCT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSSVPL*HSCTTP
Trigger: AGGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACCAGAATGCTCTCCCTaGTGCCCTCAAATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAPECSP*CPQILP
Trigger: GGGAAGAATTTGAGGGCACCAGGGAGAGCATTCTGG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTGGAAGCCATTCAGTTaGCGCATCTTGTCATCGGCG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHWKPFS*RILSSA
Trigger: CGCCGATGACAAGATGCGCCAACTGAATGGCTTCCA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCAGTCTGGATTTCTCTaGGGTCTTCCATGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWQSGFL*GLPCLF
Trigger: AAACAGACATGGAAGACCCCAGAGAAATCCAGACTG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAGTGGCCATCCGAAATaGATTTACCTGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWSGHPK*IYLTVR
Trigger: GCGCACTGTCAGGTAAATCCATTTCGGATGGCCACT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAAGTGGCCATCCGAAATaGATTTACCTGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSGHPK*IYLTVR
Trigger: GCGCACTGTCAGGTAAATCCATTTCGGATGGCCACT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGGAACATGCCACGAGTaGCCATCCGAAATGGATTTA +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCGTCHE*PSEMDL
Trigger: TAAATCCATTTCGGATGGCCACTCGTGGCATGTTCC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCGCAGGGGGAACAGGTaGAACATTCCTGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQRRGNR*NIPVTF
Trigger: GAAGGTGACAGGAATGTTCCACCTGTTCCCCCTGCG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGTTTATAAGGGGTGCTaGACGCAGGGGGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQVYKGC*TQGEQV
Trigger: CACCTGTTCCCCCTGCGTCCAGCACCCCTTATAAAC...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGCTCAGTTCTATTTCCTaGATATCAGAGGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GEPPVEPGDPSKHLLAVALSSIS*ISEGGF
Trigger: AAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG...CGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCGTGCTGGGCACCCTTaGCAATCAGGCAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDRAGHP*QSGRWC
Trigger: ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCCAGGGAGCCCGTGCTaGGTAAGCCCAGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDPGSPC*VSPEEV
Trigger: GACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGAACCATTTCTAGGGTaGAATGTCCTCGCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCEPFLG*NVLACF
Trigger: GAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCCCATTTCTCCAACTTaGCTTAAAATCGGTCACATT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGPISPT*LKIGHI
Trigger: AATGTGACCGATTTTAAGTCAAGTTGGAGAAATGGG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGTGCCACATAGGTCATaGTGGACTTTTCATCAGGAT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSVPHRS*WTFHQD
Trigger: ATCCTGATGAAAAGTCCATCATGACCTATGTGGCAC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCAGATCCCGTTTTATTaGCAGGACATCCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWQIPFY*QDIQKG
Trigger: TCCTTTTTGGATGTCCTGTCAATAAAACGGGATCTG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGTTGTGAGAACATGTTaGAAGGACTCCTGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCVVRTC*KDSWLE
Trigger: TTCAAGCCAGGAGTCCTTTCAACATGTTCTCACAAC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGTTGTGAGAACATGTTaGAAGGACTCCTGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSVVRTC*KDSWLE
Trigger: TTCAAGCCAGGAGTCCTTTCAACATGTTCTCACAAC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCTTCCATCTTCAGCCTaGTGTCCAAATCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPLPSSA*CPNLVK
Trigger: TTTCACCAGATTTGGACATCAGGCTGAAGATGGAAG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATGCCCCAGTAACTGCTaGGCCCTCATCATATATGAT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTCPSNC*ALIIYD
Trigger: ATCATATATGATGAGGGCTCAGCAGTTACTGGGGCA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTGCTTCCTTGTGTTTTaGAATGAGTTCACCGGGGCT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWCFLVF*NEFTGA
Trigger: AGCCCCGGTGAACTCATTTCAAAACACAAGGAAGCA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTTGTTGACTCTTCTGTaGAGGCAGCTCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWLLTLL*RQLFTQ
Trigger: CTGTGTGAAGAGCTGCCTTCACAGAAGAGTCAACAA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGGCTGCAGTGTCATATaGATCTCGGAAGCACATTTC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWGCSVI*ISEAHF
Trigger: GAAATGTGCTTCCGAGATTCATATGACACTGCAGCC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATATTCTCAGATGTGGTaGTGGTCCCCTCGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTYSQMW*WSPRFS
Trigger: CGAAAAACGAGGGGACCATCACCACATCTGAGAATA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTCAGCATCAATGAGATaGAATCCCTGGATGGCCATT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSSASMR*NPWMAI
Trigger: AATGGCCATCCAGGGATTTCATCTCATTGATGCTGA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGTTCAAGACATTCGGTaGCCAAGGCTTTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCVQDIR*PRLWYS
Trigger: AGAATACCAAAGCCTTGGTCACCGAATGTCTTGAAC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTCTAATTCGAATTCCTaGCCCACGAGCCAACTGATA +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSNSNS*PTSQLI
Trigger: TATCAGTTGGCTCGTGGGTCAGGAATTCGAATTAGA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTCTAATTCGAATTCCTaGCCCACGAGCCAACTGATA +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSSNSNS*PTSQLI
Trigger: TATCAGTTGGCTCGTGGGTCAGGAATTCGAATTAGA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGACGCAAACCTGGTATaGATCATGTTCTCGAACGTG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWDANLV*IMFSNV
Trigger: CACGTTCGAGAACATGATTCATACCAGGTTTGCGTC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAGCCATTTCCACAGCTaGATCCTTGTTTATTTCCCA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASHFHS*ILVYFP
Trigger: TGGGAAATAAACAAGGATTCAGCTGTGGAAATGGCT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTGTTCAACAATGTCCTaGACTTCAGAATCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLACSTMS*TSESSS
Trigger: TGAGCTGGATTCTGAAGTTCAGGACATTGTTGAACA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAACACTCTGCTCTCTGTaGTACTTGCTGATACTGCTG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGTLCSL*YLLILL
Trigger: CAGCAGTATCAGCAAGTATCACAGAGAGCAGAGTGT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGGATTGGCCAGCAAATaGCTGGTATTTTCTATCCAA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAGLASK*LVFSIQ
Trigger: TTGGATAGAAAATACCAGTCATTTGCTGGCCAATCC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTTCCCATATGCTTCCTaGACAATTGTTCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPFPYAS*TIVPED
Trigger: ATCCTCTGGAACAATTGTTCAGGAAGCATATGGGAA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTTAGTGAGTCTGGTGTaGGGATTTGTGCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSLVSLV*GFVPWN
Trigger: ATTCCATGGCACAAATCCTCACACCAGACTCACTAA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTTATCTCCCAGGCCCTaGTCTTTGCAAGTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWLSPRP*SLQVSN
Trigger: GTTAGAGACTTGCAAAGATCAGGGCCTGGGAGATAA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTATGCATCTGCTTTCTaGAGCTGTTCAGCAACACTC +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSYASAF*SCSATL
Trigger: GAGTGTTGCTGAACAGCTTCAGAAAGCAGATGCATA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTCTTCATCTGAAGTTTaGTGCTCCACATTGTTCATC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSSSEV*CSTLFI
Trigger: GATGAACAATGTGGAGCATCAAACTTCAGATGAAGA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCACGGAGTCTTCATCTaGAGTTTGATGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSHGVFI*SLMLHI
Trigger: AATGTGGAGCATCAAACTTCAGATGAAGACTCCGTG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTCACAGGTGCTTAGCTaGAGTAATGACTGGTTAACG +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPSQVLS*SNDWLT
Trigger: CGTTAACCAGTCATTACTTCAGCTAAGCACCTGTGA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTCACAGGTGCTTAGCTaGAGTAATGACTGGTTAACG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSQVLS*SNDWLT
Trigger: CGTTAACCAGTCATTACTTCAGCTAAGCACCTGTGA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGAGCAGCTTCTGCACTaGGATCACACTTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTEQLLH*DHTFRF
Trigger: AAACCTGAAAGTGTGATCTCAGTGCAGAAGCTGCTC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAATGTTTGCGAGCTGTTaGAACTTTGCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGMFASC*NFASCC
Trigger: GCAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACAT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCATGTTCAATATCAGGTaGTTGGGCTGTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LVVMLGTGRAVGNMPRVAMFNIR*LGCQCQ
Trigger: CTGGCACTGACAGCCCAATCACCTGATATTGAACAT...GGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGATGTTCAATATCAGGTaGTTGGGCTGTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWMFNIR*LGCQCQ
Trigger: CTGGCACTGACAGCCCAATCACCTGATATTGAACAT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGTTGTAAGGACTGGGTaGCATAGGAATCAGCAATTG +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSVVRTG*HRNQQL
Trigger: CAATTGCTGATTCCTATGTCACCCAGTCCTTACAAC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCCGATCCGTCAGCTTTaGGAATTCTGTAATAAATTC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGPIRQL*EFCNKF
Trigger: GAATTTATTACAGAATTCTCAAAGCTGACGGATCGG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTTTGGTAGAGGCTaGAGCGCTCCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDWFGRG*SAPGPS
Trigger: TGAAGGGCCAGGAGCGCTTCAGCCTCTACCAAACCA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ACTGAGGAGATGACGGTTCCTCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTTGGTTTGGTAGAGGCTaGAGCGCTCCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: TEEMTVPRSLPVYAKNQSWFGRG*SAPGPS
Trigger: TGAAGGGCCAGGAGCGCTTCAGCCTCTACCAAACCA...AGACTGATTCTTGGCGTAAACGGGGAGAGAGCGAGGAACCGTCATCTCCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp TCCTGCTGTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGTGTCCTGAAGTTGACTaGTTCTCCTACCCACAGACT +
Preference number: 4 (lower is better)
Translates to: SCCGLPFRTRGPSLPPSVCPEVD*FSYPQT
Trigger: AGTCTGTGGGTAGGAGAATCAGTCAACTTCAGGACA...CACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCACAGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp TGCATGAGCGACTGTCGTAAGCCCCCTCTCCAGCTGTCCACTGCGCCCTGTGCTAGTTCTTTCAAGTTCTaGGTCCAGCTAGCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: CMSDCRKPPLQLSTAPCASSFKF*VQLAKD
Trigger: GTCTTTGGCTAGCTGGACTCAGAACTTGAAAGAACT...AGCACAGGGCGCAGTGGACAGCTGGAGAGGGGGCTTACGACAGTCGCTCATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGATTTGTTGCTGGCCTTaGTCAACTGGTCACCCATCT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWICCWP*STGHPS
Trigger: AGATGGGTGACCAGTTGATCAAGGCCAGCAACAAAT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCGAAATGGATTTACCTaGCAGTGCGCTGTAGTATGG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWRNGFT*QCAVVW
Trigger: CCATACTACAGCGCACTGTCAGGTAAATCCATTTCG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACACAGCAGCAGATTTTaGCTCAACTGGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAHSSRF*LNWWKS
Trigger: GGACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATTTGGATCGGTGACATaGGCCTTCTGCCTCCGGTTC +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSFGSVT*AFCLRF
Trigger: GAACCGGAGGCAGAAGGCTCATGTCACCGATCCAAA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCTGCCTTTGGATCGGTaGCATGAGCCTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDLPLDR*HEPSAS
Trigger: GGAGGCAGAAGGCTCATGTCACCGATCCAAAGGCAG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACCTGCCTTTGGATCGGTaGCATGAGCCTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GFWVPCKAIKSWDTCSRNLPLDR*HEPSAS
Trigger: GGAGGCAGAAGGCTCATGTCACCGATCCAAAGGCAG...GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCGTGCCTATGAGTTTCTaGACCATTTCTAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPVPMSF*TISRVE
Trigger: TTCCACCCTAGAAATGGTTCAGAAACTCATAGGCAC...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGCATGAGCGACTGTCGTAAGCCCCCTCTCCAGCTGTCCACTGCGCCCTGTGCTGTGCCTATGAGTTTCTaGACCATTTCTAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: CMSDCRKPPLQLSTAPCAVPMSF*TISRVE
Trigger: TTCCACCCTAGAAATGGTTCAGAAACTCATAGGCAC...AGCACAGGGCGCAGTGGACAGCTGGAGAGGGGGCTTACGACAGTCGCTCATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTCCCGAGGCAACTGTTaGCCAGAAAGTACTTCTAGC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSRGNC*PESTSS
Trigger: GCTAGAAGTACTTTCTGGGCAACAGTTGCCTCGGGA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCAACAGATTTGGCTTCTaGCTCCCAGATTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSNRFGF*LPDFHL
Trigger: CAAGTGGAAATCTGGGAGGCAGAAGCCAAATCTGTT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTCTGTCAGTTTAGCCTaGAGACAAGAACTACTCCTG +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPSVSLA*RQELLL
Trigger: CAGGAGTAGTTCTTGTCTGCAGGCTAAACTGACAGA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCCCATGTACGAAGCCTaGAGGGAGATGACACTCTCT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQPMYEA*REMTLS
Trigger: AGAGAGTGTCATCTCCCTGCAGGCTTCGTACATGGG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACAACATTCCATCTCCTaGTTAGCAGATGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGQHSIS*LADASL
Trigger: CAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTGTAGATGTTGCTGCTaGTGTTGCAGAGAAATCTCA +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWCRCCC*CCREIS
Trigger: TGAGATTTCTCTGCAACAGCAGCAGCAACATCTACA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTGTAGATGTTGCTGCTaGTGTTGCAGAGAAATCTCA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLACRCCC*CCREIS
Trigger: TGAGATTTCTCTGCAACAGCAGCAGCAACATCTACA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACATGCTTTGGTTCCCTaGCCGTTCTTCTGGAGACTT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAHALVP*PFFWRL
Trigger: AAGTCTCCAGAAGAACGGGCAGGGAACCAAAGCATG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAAACGATTCCACAGACTaGTGCCTAGCTAGAATGCCA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTNDSTD*CLARMP
Trigger: TGGCATTCTAGCTAGGCAGCAGTCTGTGGAATCGTT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAGTGATGCTCTCCACTaGCCTGGTGACTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASDALH*PGDCFF
Trigger: AAAGAAGCAGTCACCAGGGCAGTGGAGAGCATCACT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTGCCTCAGTTTCCTGTaGTTTGAAAGCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLACLSFL*FESFLH
Trigger: ATGAAGGAAGCTTTCAAAGCACAGGAAACTGAGGCA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTTCCTCTGTGGTGGCTaGCTCTTTTGTTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPFLCGG*LFCFGN
Trigger: ATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCTGGGATTCAATCTCTaGAGGGACTATGGTGTACAT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCLGFNL*RDYGVH
Trigger: ATGTACACCATAGTCCCTGCAGAGATTGAATCCCAG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCTTCTAAAGCTTTTCTaGATTCTTCCACCTGGGATT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTLLKLF*ILPPGI
Trigger: AATCCCAGGTGGAAGAATGCAGAAAAGCTTTAGAAG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCCATGTCCTTGTCATaGTTCCAAAGTGAAGACCAA +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSMSLS*FQSEDQ
Trigger: TTGGTCTTCACTTTGGAAGCATGACAAGGACATGGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGAACATTCTGGGCCTTaGTCAGTGTTTAGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGEHSGP*SVFSES
Trigger: AGACTCACTAAACACTGAGCAAGGCCCAGAATGTTC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATGCTGTTCCAGCACCTaGTGCATGTCTGCGTTTAAT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGCCSST*CMSAFN
Trigger: ATTAAACGCAGACATGCAGCAGGTGCTGGAACAGCA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAACTCCAGAACCTGTTaGTGCTGGAAATCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGNSRTC*CWKSFC
Trigger: ACAAAAAGATTTCCAGCAGCAACAGGTTCTGGAGTT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTGTCTGAAGGTTACTTaGTTCTTGGCGCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWCLKVT*FLAQVF
Trigger: GAAGACCTGCGCCAAGAAGCAAGTAACCTTCAGACA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTTTCATTCTGGTAACTaGGGTTGTAATCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPFHSGN*GCNRGQ
Trigger: CTGGCCTCGATTACAACCGCAGTTACCAGAATGAAA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCAGCTCCACTGTATATaGATCTGCTTTCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCQLHCI*ICFLKL
Trigger: CAGCTTCAGAAAGCAGATGCATATACAGTGGAGCTG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACTCCCCCAGGTGCTCTaGAAACTCCGTTCTTTCATA +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLALPQVL*KLRSFI
Trigger: TATGAAAGAACGGAGTTTGCAGAGCACCTGGGGGAG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTTCATCTCCCCCAGGTaGTCTGCAAACTCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHFISPR*SANSVL
Trigger: AAGAACGGAGTTTGCAGAGCACCTGGGGGAGATGAA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCAGTCTCTCTTCTTGTaGTTCCAGCCAGTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCQSLFL*FQPVVQ
Trigger: TTGAACAACTGGCTGGAAGCACAAGAAGAGAGACTG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCTTGCTGTGTTCCATaGAGTACCAGAATCGGATTG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWACCVP*STRIGL
Trigger: CAATCCGATTCTGGTACTGCATGGAACACAGCAAGC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGCTTGCTGTGTTCCATaGAGTACCAGAATCGGATTG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGACCVP*STRIGL
Trigger: CAATCCGATTCTGGTACTGCATGGAACACAGCAAGC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCATAACACCACAGGCTTaGTGTGTTCCATGCAGTACC +
Preference number: 4 (lower is better)
Translates to: LVVMLGTGRAVGNMPRVAITPQA*CVPCST
Trigger: GGTACTGCATGGAACACAGCAAGCCTGTGGTGTTAT...GGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGAGCTGTTGAAACTTTaGTTCCTGCTGCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTELLKL*FLLLQP
Trigger: AGGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGTTTTCTGCACATCATaGTGCAGCTCCTTTATGTCC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCVFCTS*CSSFMS
Trigger: GGACATAAAGGAGCTGCAGCATGATGTGCAGAAAAC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGCTTCTTTTGTTTTCTaGACATCATGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSASFVF*TSCCSS
Trigger: GGAGCTGCAGCATGATGTGCAGAAAACAAAAGAAGC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTGTGCCTTTAAAACTTaGAGCCTGCTTTTCAACTCC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLACAFKT*SLLFNS
Trigger: GGAGTTGAAAAGCAGGCTGCAAGTTTTAAAGGCACA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCACCAGGTGCGAAGGTTaGTCATGTTTTTGTCCAACT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPTRCEG*SCFCPT
Trigger: AGTTGGACAAAAACATGAGCAACCTTCGCACCTGGT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TCCTGCTGTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGTTCGAGCCAACCAGGTaGGAAGGTTGCTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: SCCGLPFRTRGPSLPPSVFEPTR*EGCSCF
Trigger: AAAACATGAGCAACCTTCGCACCTGGTTGGCTCGAA...CACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCACAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGAATGCTCTCCCTGGTaGCCTCAAATTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAECSPW*PQILPS
Trigger: AGAGGGAAGAATTTGAGGGCACCAGGGAGAGCATTC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCGCTTTCAGTATCTCCTaGAGTCTCTTCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPAFSIS*SLFTLS
Trigger: ACTGAGAGTGAAGAGACTGCAGGAGATACTGAAAGC...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGCTGTGGCCGTGTGCTaGCGGGGACCCTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCAVAVC*RGPCSL
Trigger: CAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCCAGAATTCACAAAGTaGTTGGCTCTTCAGGAAACT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPPEFTK*LALQET
Trigger: AGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTGTGATGGACACCACTaGTCATTGACCATACCTACA +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSCDGHH*SLTIPT
Trigger: TGTAGGTATGGTCAATGAGCAGTGGTGTCCATCACA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCCGGCAGCTCAAAATTaGCAGCTGATTGGAGTAAAA +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCPAAQN*QLIGVK
Trigger: TTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCTGCTTTCTGGTAACTaGGGTTGTAATCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHLLSGN*GCNRGQ
Trigger: CTGGCCTCGATTACAACCGCAGTTACCAGAAAGCAG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGCCAAGGATAATGGATaGGTTTCCATCAATGATATC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTAKDNG*VSINDI
Trigger: GATATCATTGATGGAAACCCATCCATTATCCTTGGC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAACATCCACATCTTCTaGTTCCAGCAATCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCNIHIF*FQQSGD
Trigger: ATCCCCAGATTGCTGGAACCAGAAGATGTGGATGTT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTCCCAGGGGCATCTTTaGAATACTGCAGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWSQGHL*NTAETV
Trigger: CACAGTTTCTGCAGTATTCCAAAGATGCCCCTGGGA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGATCCAAAACAGATTTaGCTTCTGCCTCCCAGATTT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWDPKQI*LLPPRF
Trigger: AAATCTGGGAGGCAGAAGCCAAATCTGTTTTGGATC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGATGAAATCCCTGGATaGCCATTTTATGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCDEIPG*PFYGEA
Trigger: TGCCTCTCCATAAAATGGCCATCCAGGGATTTCATC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGCCATCTTTGAAGTGTaGAAGAGAATTAGCCATTTC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTAIFEV*KRISHF
Trigger: GAAATGGCTAATTCTCTTCCACACTTCAAAGATGGC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTCCTTTGCTCGAGCCTaGCATATGGACTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPSFARA*HMDSIF
Trigger: AAAAATGGAGTCCATATGCCAGGCTCGAGCAAAGGA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTCCTTTGCTCGAGCCTaGCATATGGACTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCSFARA*HMDSIF
Trigger: AAAAATGGAGTCCATATGCCAGGCTCGAGCAAAGGA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTTCCTCAGGTTTCTATaGTCATCCTGGAGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGFLRFL*SSWSLS
Trigger: ACTGAGACTCCAGGATGACCATAGAAACCTGAGGAA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAGCTCTGGTCCTCTGTaGGTAGTAACTTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSSGPL*VVTYPL
Trigger: AAGAGGATAAGTTACTACCCACAGAGGACCAGAGCT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTCTGTGACGCAAACCTaGTATGAATCATGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASVTQT*YESCSR
Trigger: TCGAGAACATGATTCATACCAGGTTTGCGTCACAGA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACCTGCACATCAGAAGTaGCCTGCTTCTCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSPAHQK*PASLCL
Trigger: CAGGCAGAGAGAAGCAGGCCACTTCTGATGTGCAGG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTCCATGTCAGTCACGTaGTTTGATAAATTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSMSVT*FDKFSH
Trigger: ATGGGAGAATTTATCAAACCACGTGACTGACATGGA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGGCAACGAGGACATaGACTGTCCAAGAACTGTCT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHVATRT*TVQELS
Trigger: AGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCAC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTTCTCTGTAAGACAGTaGCAACGAGGACATGGACTG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWFSVRQ*QRGHGL
Trigger: CAGTCCATGTCCTCGTTGCCACTGTCTTACAGAGAA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCACGTTCTCTCCATATTaGCATAAACAGTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLATFSPY*HKQSSS
Trigger: GCTGCTAGACTGTTTATGCCAATATGGAGAGAACGT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGACGTTCTCTCCATATTaGCATAAACAGTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWTFSPY*HKQSSS
Trigger: GCTGCTAGACTGTTTATGCCAATATGGAGAGAACGT...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCTCTGCAGGGACTATaGTGTACATTTCGGAATACT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSLQGL*CTFRNT
Trigger: AGTATTCCGAAATGTACACCATAGTCCCTGCAGAGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTGGCCAGCAAATGACTaGTATTTTCTATCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPWPAND*YFLSKP
Trigger: AGGCTTGGATAGAAAATACCAGTCATTTGCTGGCCA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCATAGTCAGCAGGATTaGCCAGCAAATGACTGGTAT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSHSQQD*PANDWY
Trigger: ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCACACTATCTCAGCAATaGTTTTCTTCATGGGACGTA +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTTLSQQ*FSSWDV
Trigger: TACGTCCCATGAAGAAAACCATTGCTGAGATAGTGT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCCTCTTCTGTTTGGTTaGGCCTTAGGGAACATTCTG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWPLLFG*ALGNIL
Trigger: CAGAATGTTCCCTAAGGCCCAACCAAACAGAAGAGG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAGCTCAACTGCCACGTTaGCTTGTTGCAGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSAQLPR*LVAATA
Trigger: AGCTGTGGCTGCAACAAGCCAACGTGGCAGTTGAGC...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCAGCCTCATGTTGAGTaGCTCCATTATCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQQPHVE*LHYLPG
Trigger: GCCTGGGAGATAATGGAGCCACTCAACATGAGGCTG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGTATCGTTATCATGTTaGCAATACTGGGGCCACATT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAVSLSC*QYWGHI
Trigger: AATGTGGCCCCAGTATTGCCAACATGATAACGATAC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAGCCTGTGGAGCTCATaGTCAATTTTCTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSLWSS*SIFLFR
Trigger: CCTGAACAAGAAAATTGACCATGAGCTCCACAGGCT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAAGAGCTTGCAGCCTGTaGAGCTCATGGTCAATTTTC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTRACSL*SSWSIF
Trigger: GAAAATTGACCATGAGCTCCACAGGCTGCAAGCTCT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATTGCCGATAACCTCCTaGAGTTTCTCCCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLALPITS*SFSQLP
Trigger: AGGGAGTTGGGAGAAACTCCAGGAGGTTATCGGCAA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGCTGGAGCAGACTCTaGGCCTTCTGCAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSWSRL*AFCNWS
Trigger: AGACCAGTTGCAGAAGGCCCAGAGTCTGCTCCAGCT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCGTCGATCCAGGACACTaGAATTTTGGAGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPVDPGH*NFGERL
Trigger: AAGCCTTTCTCCAAAATTCCAGTGTCCTGGATCGAC...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATCAATATCAGGTGATTaGGCTGTCAGTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSISGD*AVSAST
Trigger: TGTGCTGGCACTGACAGCCCAATCACCTGATATTGA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTTATTCTTCAGCTCATaGATCAGACTTCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGLFFSS*IRLLVW
Trigger: CCAAACCAGAAGTCTGATCCATGAGCTGAAGAATAA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGTCCTCGTGAAGCTCTaGAAGAGGATCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTVLVKL*KRIFTL
Trigger: CAAAGTGAAGATCCTCTTCCAGAGCTTCACGAGGAC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGTCCTCGTGAAGCTCTaGAAGAGGATCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGVLVKL*KRIFTL
Trigger: CAAAGTGAAGATCCTCTTCCAGAGCTTCACGAGGAC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGCATAAACAACAGGCTTaGAAAGCTCAGACTCAATTC +
Preference number: 4 (lower is better)
Translates to: GEPPVEPGDPSKHLLAVAHKQQA*KAQTQF
Trigger: GAATTGAGTCTGAGCTTTCCAAGCCTGTTGTTTATG...CGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAATGTAATTTCCTGTTaGAAGCCATTCAGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLANVISC*KPFSWR
Trigger: GCGCCAACTGAATGGCTTCCAACAGGAAATTACATT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGGAACATGCCACGAGTaGCCATCCGAAATGGATTTA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTGTCHE*PSEMDL
Trigger: TAAATCCATTTCGGATGGCCACTCGTGGCATGTTCC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGGAACATGCCACGAGTaGCCATCCGAAATGGATTTA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGGTCHE*PSEMDL
Trigger: TAAATCCATTTCGGATGGCCACTCGTGGCATGTTCC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATACTTTGGAGCTCTGTaGATTCGGGGCTCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAYFGAL*IRGSRF
Trigger: AAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCAGAGCAGGCTCAGCTaGCGGAGTCTACTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDQSRLS*RSLLWS
Trigger: GCTCCAAAGTAGACTCCGCCAGCTGAGCCTGCTCTG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAACTGGTGGAAGTCCTaGCACTGCATGAGCGACTGT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQNWWKS*HCMSDC
Trigger: ACAGTCGCTCATGCAGTGCCAGGACTTCCACCAGTT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR CCA 90 bp CCACGTCTCCTCGATTTTCATGCGCCGCTCCATGGACATGGCACAAATGTTCCTCCGGGGGTCTGCCTTTaGATCGGTGACATGAGCCTT +
Preference number: 4 (lower is better)
Translates to: PRLLDFHAPLHGHGTNVPPGVCL*IGDMSL
Trigger: AAGGCTCATGTCACCGATCCAAAGGCAGACCCCCGG...AGGAACATTTGTGCCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGACGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCACCGGGGGTCTGCCTTTaGATCGGTGACATGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RSLPVYAKNQSGFLWGLPPGVCL*IGDMSL
Trigger: AAGGCTCATGTCACCGATCCAAAGGCAGACCCCCGG...TGGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAAGGCCATTAAATCTTaGGACACTTGCTCCCGTAAC +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGKAIKS*DTCSRN
Trigger: GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCAAGGCCATTAAATCTTaGGACACTTGCTCCCGTAAC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPKAIKS*DTCSRN
Trigger: GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGAGGAAGGAGCGCTGTaGCCGTGTGCTGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCEEGAL*PCAAGD
Trigger: GTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTAATTTCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCTCTGGGGCCACGTGCTaGGCACCCTTGGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: VISCWKPFSWRILSSASLSGATC*APLAIR
Trigger: CCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGA...GAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGAAATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAATTCACAAAGTGCTTaGCTCTTCAGGAAACTGACA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGNSQSA*LFRKLT
Trigger: TGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGAACCATTTCTAGGGTaGAATGTCCTCGCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWEPFLG*NVLACF
Trigger: GAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCTGAACAGAACATTTTaGTGTATAACCGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLALNRTF*CITGSS
Trigger: TGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCAGTGGCCATCCGAAATaGATTTACCAGAAGACGCTT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSSGHPK*IYQKTL
Trigger: AAGCGTCTTCTGGTAAATCCATTTCGGATGGCCACT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358025.7
ENST00000458046.6
ENST00000555002.6
3UTR CAA 72 bp TGCTGTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTaGCCACCATCCGTGCCTGGAGGTAATAGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: CCGLPFRTRGPS*PPSVPGGNSSF
Trigger: AAAGCTACTATTACCTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCTGTTCAGCTTGCAATaGAATATGGAGATCGTCGAT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCLFSLQ*NMEIVD
Trigger: ATCGACGATCTCCATATTTCATTGCAAGCTGAACAG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGCAAGCTTCTCAATATaGAAGTGCAGGATAATTGTC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAASFSI*KCRIIV
Trigger: GACAATTATCCTGCACTTTCATATTGAGAAGCTTGC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGCAAGCTTCTCAATATaGAAGTGCAGGATAATTGTC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWASFSI*KCRIIV
Trigger: GACAATTATCCTGCACTTTCATATTGAGAAGCTTGC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTCTTTCACCTTTCCCTaGGCCTCCTCTCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDSFTFP*ASSPVP
Trigger: TGGGACTGGAGAGGAGGCTCAGGGAAAGGTGAAAGA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTTTTCTTCATTGAATaGCTCCATAAAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTFFFIE*LHKGQQ
Trigger: CTGCTGTCCTTTATGGAGTCATTCAATGAAGAAAAA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGATCCTGGGAGGCTaGCAAATCTTCATCCATAAG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHVILGG*QIFIHK
Trigger: CTTATGGATGAAGATTTGTCAGCCTCCCAGGATCAC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGGTACCAATGGCAAGTaGTTTTCATCCTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTGTNGK*FSSLFS
Trigger: TGAAAATAAGGATGAAAATCACTTGCCATTGGTACC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCAACCACATCATTGCTaGCTTCGACTAAGAAATTTC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAQPHHC*LRLRNF
Trigger: GAAATTTCTTAGTCGAAGTCAGCAATGATGTGGTTG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTGCCCCAGTAACTGCTaGGCCCTCATCATATATGAT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHCPSNC*ALIIYD
Trigger: ATCATATATGATGAGGGCTCAGCAGTTACTGGGGCA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCCTTGTGTTTTGAAATaGGTTCACCGGGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQPCVLK*VHRGSL
Trigger: GAGAGAGCCCCGGTGAACTCATTTCAAAACACAAGG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATGCTTCCTTGTGTTTTaGAATGAGTTCACCGGGGCT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLACFLVF*NEFTGA
Trigger: AGCCCCGGTGAACTCATTTCAAAACACAAGGAAGCA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCTCTTCACTTCTTGTTaGCTCTTCTGTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHLFTSC*LFCEGS
Trigger: GCTGCCTTCACAGAAGAGTCAACAAGAAGTGAAGAG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATCAGCATCAATGAGATaGAATCCCTGGATGGCCATT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSASMR*NPWMAI
Trigger: AATGGCCATCCAGGGATTTCATCTCATTGATGCTGA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCAGCATCAATGAGATaGAATCCCTGGATGGCCATT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSASMR*NPWMAI
Trigger: AATGGCCATCCAGGGATTTCATCTCATTGATGCTGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTATTTGTTTTCCTCAGTaGATTCCTCCTGTACCCCAT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCICFPQ*IPPVPH
Trigger: ATGGGGTACAGGAGGAATTCACTGAGGAAAACAAAT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTTCCATTTCTCTTCTTaGTTAGTCAACCACTTCCTC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAFHFSS*LVNHFL
Trigger: GAGGAAGTGGTTGACTAATCAAGAAGAGAAATGGAA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCAATCTTCTGCCCCACTaGAGATGTATTTTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSNLLPH*RCILLD
Trigger: GTCAAGCAAAATACATCTTCAGTGGGGCAGAAGATT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCAGCAAGGTATTCCTaGAAATCTCTGAGGACACAA +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWAARYS*KSLRTQ
Trigger: TTGTGTCCTCAGAGATTTTCAGGAATACCTTGCTGC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGACCAGCATTTGGTATTaGTTCCGTAAGTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWTSIWY*FRKSSR
Trigger: CCTAGAGGACTTACGGAATCAATACCAAATGCTGGT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCATGTTTGTTAGCTCCTaGAGATGTGTTGAGATTCCA +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPMFVSS*RCVEIP
Trigger: TGGAATCTCAACACATCTTCAGGAGCTAACAAACAT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAGTTTCCACAGCCCCTaGGCTTTCAGGAACATTCTG +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSFHSP*AFRNIL
Trigger: CAGAATGTTCCTGAAAGCTCAGGGGCTGTGGAAACT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGAAGTTGTGGTCTGTTaGAAGAAATTCTTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTEVVVC*KKFFKA
Trigger: TGCTTTGAAGAATTTCTTTCAACAGACCACAACTTC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTGCCATATTTTGGAATaGAGTTGTGGTCTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTCHILE*SCGLLK
Trigger: TTTCAACAGACCACAACTTCATTCCAAAATATGGCA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTCTGTGATACTTGCTaGTACTGCTGGAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTLCDTC*YCWKGI
Trigger: GATTCCTTTCCAGCAGTATCAGCAAGTATCACAGAG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGGCCTTATTCAACTGTaGGGTTCTACACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAGLIQL*GSTLCS
Trigger: AGAGCAGAGTGTAGAACCTCACAGTTGAATAAGGCC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTTCCCATATGCTTCCTaGACAATTGTTCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCFPYAS*TIVPED
Trigger: ATCCTCTGGAACAATTGTTCAGGAAGCATATGGGAA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATTATCTCCCAGGCCCTaGTCTTTGCAAGTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLALSPRP*SLQVSN
Trigger: GTTAGAGACTTGCAAAGATCAGGGCCTGGGAGATAA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAGCTTCAGCCTCATGTTaGGTGGCTCCATTATCTCCC +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSASASC*VAPLSP
Trigger: GGGAGATAATGGAGCCACTCAACATGAGGCTGAAGC...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCTTCATCTGAAGTTTaGTGCTCCACATTGTTCATC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSSSEV*CSTLFI
Trigger: GATGAACAATGTGGAGCATCAAACTTCAGATGAAGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCACAGGTGCTTAGCTaGAGTAATGACTGGTTAACG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSQVLS*SNDWLT
Trigger: CGTTAACCAGTCATTACTTCAGCTAAGCACCTGTGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATGTTTCCAGACATGCTaGTGTTTGCGAGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGCFQTC*CLRAVE
Trigger: TTCAACAGCTCGCAAACATCAGCATGTCTGGAAACA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCCGATCCGTCAGCTTTaGGAATTCTGTAATAAATTC +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPPIRQL*EFCNKF
Trigger: GAATTTATTACAGAATTCTCAAAGCTGACGGATCGG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTGTCCTGAAGTTGACTaGTTCTCCTACCCACAGACT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHCPEVD*FSYPQT
Trigger: AGTCTGTGGGTAGGAGAATCAGTCAACTTCAGGACA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACCGGAGTGCAGGAGGTaGGCCGCCGGTGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKPECRR*AAGGTG
Trigger: CCCGGTTCCACCGGCGGCTCACCTCCTGCACTCCGG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGACACCACTGCTCATTaGCCATACCTACATTATAAT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPDTTAH*PYLHYN
Trigger: ATTATAATGTAGGTATGGTCAATGAGCAGTGGTGTC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAGCAGAGCTAGGTACTaGACAGAACATTTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSRARY*TEHFGV
Trigger: TACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTATGGAGATCGTCGATaGCCCAGGAACCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQYGDRR*PRNPVH
Trigger: ATGAACAGGGTTCCTGGGGCATCGACGATCTCCATA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTCTTTGTTGGATCTATaGTTCACACTCTTCATGTCA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSLLDL*FTLFMS
Trigger: TGACATGAAGAGTGTGAAGCATAGATCCAACAAAGA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTATCTTCACTCCTCTaGACCCTGTGGTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHVSSLL*TLWFIP
Trigger: AGGAATGAACCACAGGGTGCAGAGGAGTGAAGATAC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTTTTGCTGTAGAATCTaGTGTTGTATCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGFCCRI*CCISSS
Trigger: ACTAGAGGAGATACAACAGCAGATTCTACAGCAAAA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAGTACGCTGTCCACCTaGTTTATTTTACTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSTLST*FILLFL
Trigger: AAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAAGCTCCTTCACATGTaGTTTGGGCAGATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWKLLHM*FGQMLL
Trigger: AAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACTCCTGCTTAGCAGATaGAAGCCTGTTTTCCAAATC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGLLLSR*KPVFQI
Trigger: GATTTGGAAAACAGGCTTGCATCTGCTAAGCAGGAG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCTCCTGCTTAGCAGATaGAAGCCTGTTTTCCAAATC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWLLLSR*KPVFQI
Trigger: GATTTGGAAAACAGGCTTGCATCTGCTAAGCAGGAG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAGCAAATTGTCCAAATaGTGTGCCGAATATCCTATA +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSKLSK*CAEYPI
Trigger: TATAGGATATTCGGCACAGCATTTGGACAATTTGCT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAACTGTAGATGTTGCTaGTGCTGTTGCAGAGAAATC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCNCRCC*CCCREI
Trigger: GATTTCTCTGCAACAGCAGCAGCAACATCTACAGTT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCAACTGTAGATGTTGCTaGTGCTGTTGCAGAGAAATC +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSNCRCC*CCCREI
Trigger: GATTTCTCTGCAACAGCAGCAGCAACATCTACAGTT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCTTAACTGTAGATGTTaGTGCTGCTGTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGLNCRC*CCCCRE
Trigger: TTCTCTGCAACAGCAGCAGCAACATCTACAGTTAAG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCTTAACTGTAGATGTTaGTGCTGCTGTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCLNCRC*CCCCRE
Trigger: TTCTCTGCAACAGCAGCAGCAACATCTACAGTTAAG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACAACGATTCCACAGACTaGTGCCTAGCTAGAATGCCA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHNDSTD*CLARMP
Trigger: TGGCATTCTAGCTAGGCAGCAGTCTGTGGAATCGTT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCAATTCCTTCTGAGATaGCTCCAAAGTAACATGGTG +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCQFLLR*LQSNMV
Trigger: CACCATGTTACTTTGGAGGCATCTCAGAAGGAATTG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAACTTGCTCCTGAAATaGTTCACAATTGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTNLLLK*FTIVLF
Trigger: GAAAAGGACAATTGTGAAGCATTTCAGGAGCAAGTT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAATACTACACATTTCTaGCCAAACTTGCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTNTTHF*PNLLLK
Trigger: TTTCAGGAGCAAGTTTGGGCAGAAATGTGTAGTATT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTGCCTCAGTTTCCTGTaGTTTGAAAGCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPCLSFL*FESFLH
Trigger: ATGAAGGAAGCTTTCAAAGCACAGGAAACTGAGGCA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTTCCTCTGTGGTGGCTaGCTCTTTTGTTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSFLCGG*LFCFGN
Trigger: ATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACTGGGATTCAATCTCTaGAGGGACTATGGTGTACAT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGLGFNL*RDYGVH
Trigger: ATGTACACCATAGTCCCTGCAGAGATTGAATCCCAG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCTTCTAAAGCTTTTCTaGATTCTTCCACCTGGGATT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPLLKLF*ILPPGI
Trigger: AATCCCAGGTGGAAGAATGCAGAAAAGCTTTAGAAG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACCAGGCCCTGATCTTTaGAAGTCTCTAACAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAPGPDL*KSLTER
Trigger: CCTTTCTGTTAGAGACTTGCAAAGATCAGGGCCTGG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCCAGGCCCTGATCTTTaGAAGTCTCTAACAGAAAGG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHPGPDL*KSLTER
Trigger: CCTTTCTGTTAGAGACTTGCAAAGATCAGGGCCTGG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCAACTCCAGAACCTGTTaGTGCTGGAAATCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPNSRTC*CWKSFC
Trigger: ACAAAAAGATTTCCAGCAGCAACAGGTTCTGGAGTT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTGTCTGAAGGTTACTTaGTTCTTGGCGCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHCLKVT*FLAQVF
Trigger: GAAGACCTGCGCCAAGAAGCAAGTAACCTTCAGACA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTGTTCAGCAACACTCTaGCCACTGATTTCATTCAAA +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPCSATL*PLISFK
Trigger: TTTGAATGAAATCAGTGGGCAGAGTGTTGCTGAACA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCACTGTATATGCATCTaGTTTCTGAAGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSHCICI*FLKLFS
Trigger: GCTGAACAGCTTCAGAAAGCAGATGCATATACAGTG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCAGCTCCACTGTATATaGATCTGCTTTCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWQLHCI*ICFLKL
Trigger: CAGCTTCAGAAAGCAGATGCATATACAGTGGAGCTG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATGCAACAAAGCATCTTaGTGGCTCTCAGTGACGAAA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGCNKAS*WLSVTK
Trigger: TTTCGTCACTGAGAGCCAGCAAGATGCTTTGTTGCA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAGTTCCACCATGCCTTaGAACAAAGCATCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASSTMP*NKASCW
Trigger: CCAGCAAGATGCTTTGTTGCAAGGCATGGTGGAACT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTCACCAGTTCCACCATaGCTTGCAACAAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWSPVPP*LATKHL
Trigger: AAGATGCTTTGTTGCAAGGCATGGTGGAACTGGTGA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTCTGTTACTTGTTCTaGCCAAAATGTCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTFCYLF*PKCLSV
Trigger: AACAGAGAGACATTTTGGGCAGAACAAGTAACAGAA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACACGCCACCAACTGTTTaGCTTCGTTCAGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHTPPTV*LRSEFG
Trigger: ACCAAACTCTGAACGAAGGCAAACAGTTGGTGGCGT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTTCTTTCATAGCGCTTaGTTTCTACATCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSFFHSA*FLHHRC
Trigger: GCACCTGTGATGTAGAAAGCAAGCGCTATGAAAGAA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACAGTCTCTCTTCTTGTaGTTCCAGCCAGTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGQSLFL*FQPVVQ
Trigger: TTGAACAACTGGCTGGAAGCACAAGAAGAGAGACTG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGCTTGCTGTGTTCCATaGAGTACCAGAATCGGATTG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHACCVP*STRIGL
Trigger: CAATCCGATTCTGGTACTGCATGGAACACAGCAAGC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACATAACACCACAGGCTTaGTGTGTTCCATGCAGTACC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHITPQA*CVPCST
Trigger: GGTACTGCATGGAACACAGCAAGCCTGTGGTGTTAT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGAGCTGTTGAAACTTTaGTTCCTGCTGCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHELLKL*FLLLQP
Trigger: AGGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTGTACAACACCTCTGAGGAATTTGGGCAGGCTGCCGTCCTCTCAGCTGACTTGTGGGGGCAGGATCTCTaGCAGGTTGTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: VYNTSEEFGQAAVLSADLWGQDL*QVVSRH
Trigger: ATGTCTGGAAACAACCTGGCAGAGATCCTGCCCCCA...CAAGTCAGCTGAGAGGACGGCAGCCTGCCCAAATTCCTCAGAGGTGTTGTACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCTTCTTTTGTTTTCTaGACATCATGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWASFVF*TSCCSS
Trigger: GGAGCTGCAGCATGATGTGCAGAAAACAAAAGAAGC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAACTGCAGCGCTCCAGTaGCGTGGCCGTGGCCCGAAT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSTAALQ*RGRGPN
Trigger: ATTCGGGCCACGGCCACGGCACTGGAGCGCTGCAGT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAGTGAAATCTTGCCACTaGCTCACCAGCCCATCAACG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSVKSCH*LTSPST
Trigger: CGTTGATGGGCTGGTGAGGCAGTGGCAAGATTTCAC...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGAAGTAGTGAAATCTTaGCACTGCCTCACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQEVVKS*HCLTSP
Trigger: TGGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTC...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCTCTGAGTCTTCCACGAGAACGTaGCGGGTTAAGTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SCWKPFSWRILSSASLSESSTRT*RVKSAF
Trigger: GAAGGCGGACTTAACCCGGCACGTTCTCGTGGAAGA...CTCAGAGAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAACCAGGTGCGAAGGTTaGTCATGTTTTTGTCCAACT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGTRCEG*SCFCPT
Trigger: AGTTGGACAAAAACATGAGCAACCTTCGCACCTGGT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCACCAGGTGCGAAGGTTaGTCATGTTTTTGTCCAACT +
Preference number: 4 (lower is better)
Translates to: LVVMLGTGRAVGNMPRVATRCEG*SCFCPT
Trigger: AGTTGGACAAAAACATGAGCAACCTTCGCACCTGGT...GGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTTCGAGCCAACCAGGTaGGAAGGTTGCTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHFEPTR*EGCSCF
Trigger: AAAACATGAGCAACCTTCGCACCTGGTTGGCTCGAA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCACAGGCATCGGAGTCGTaGAGTAGGACGTCACAGATG +
Preference number: 4 (lower is better)
Translates to: RSLPVYAKNQSGFLWGLPQASES*SRTSQM
Trigger: CATCTGTGACGTCCTACTGCACGACTCCGATGCCTG...TGGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GTGTACAACACCTCTGAGGAATTTGGGCAGGCTGCCGTCCTCTCAGCTGACTTGTCTCCTCGATTTTCATaGGCCGCTCCATGGACATGG +
Preference number: 4 (lower is better)
Translates to: VYNTSEEFGQAAVLSADLSPRFS*AAPWTW
Trigger: CCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGA...CAAGTCAGCTGAGAGGACGGCAGCCTGCCCAAATTCCTCAGAGGTGTTGTACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CACCTTCCATTTGCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATTCCACGTTGGTCAGCTaGAGGTCCATCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: HLPFACSDARDRKGCREHSTLVS*RSISVS
Trigger: GCTCACAGAGATGGACCTGCAGCTGACCAACGTGGA...ATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGCAAATGGAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACTCCACGTTGGTCAGCTaGAGGTCCATCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GFWVPCKAIKSWDTCSRNSTLVS*RSISVS
Trigger: GCTCACAGAGATGGACCTGCAGCTGACCAACGTGGA...GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CACCTTCCATTTGCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGTGGTTTATAAGGGGTaGTGGACGCAGGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: HLPFACSDARDRKGCREHVVYKG*WTQGEQ
Trigger: CTGTTCCCCCTGCGTCCAGCACCCCTTATAAACCAC...ATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGCAAATGGAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GTGTACAACACCTCTGAGGAATTTGGGCAGGCTGCCGTCCTCTCAGCTGACTTGTGGAAGTCCTGGCACTaGATGAGCGACTGTCGTAAG +
Preference number: 4 (lower is better)
Translates to: VYNTSEEFGQAAVLSADLWKSWH*MSDCRK
Trigger: CTTACGACAGTCGCTCATGCAGTGCCAGGACTTCCA...CAAGTCAGCTGAGAGGACGGCAGCCTGCCCAAATTCCTCAGAGGTGTTGTACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553289.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAGCTCCTTTTCCAGTTaGATTAGTTCCCTCCGACAC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASSFSS*ISSLRH
Trigger: GTGTCGGAGGGAACTAATGCAACTGGAAAAGGAGCT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAAATCTTGGGACACTTaGTCCCGTAACTGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGKSWDT*SRNCLS
Trigger: ACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCAAATCTTGGGACACTTaGTCCCGTAACTGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSKSWDT*SRNCLS
Trigger: ACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTGCTGCCGGGGACCCTaGTCTCTGTCTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCCCRGP*SLSPPR
Trigger: GCGAGGAGGAGACAGAGAGCAGGGTCCCCGGCAGCA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATGCTGCCGGGGACCCTaGTCTCTGTCTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSCCRGP*SLSPPR
Trigger: GCGAGGAGGAGACAGAGAGCAGGGTCCCCGGCAGCA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAGTTGTTGGCCTGAGTaGAGCTGTAGTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSCWPE*SCSLLR
Trigger: CCGAAGAAGACTACAGCTGCACTCAGGCCAACAACT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCCAGAATTCACAAAGTaGTTGGCTCTTCAGGAAACT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSPEFTK*LALQET
Trigger: AGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCCGGCAGCTCAAAATTaGCAGCTGATTGGAGTAAAA +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWPAAQN*QLIGVK
Trigger: TTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATTAGAGCCCTGGCACTaGATGAGCGACTGTCGTAAG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSLEPWH*MSDCRK
Trigger: CTTACGACAGTCGCTCATGCAGTGCCAGGGCTCTAA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458046.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTCCGGCCGAAGGCTCTaGGCGCAGCTGAGCGCGCTC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSSGRRL*AQLSAL
Trigger: GAGCGCGCTCAGCTGCGCCCAGAGCCTTCGGCCGGA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTCCGGCCGAAGGCTCTaGGCGCAGCTGAGCGCGCTC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSGRRL*AQLSAL
Trigger: GAGCGCGCTCAGCTGCGCCCAGAGCCTTCGGCCGGA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGTGAAGGCTTTCTTCTaGGTGTCTTCCTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAVKAFF*VSSCSA
Trigger: AGCTGAACAGGAAGACACCCAGAAGAAAGCCTTCAC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGCCAAGGATAATGGATaGGTTTCCATCAATGATATC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWAKDNG*VSINDI
Trigger: GATATCATTGATGGAAACCCATCCATTATCCTTGGC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAAACATCCACATCTTCTaGTTCCAGCAATCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTNIHIF*FQQSGD
Trigger: ATCCCCAGATTGCTGGAACCAGAAGATGTGGATGTT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTTGTTGTTTTGCAGGTaGTGTTCAAGAATATCTCTG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGLLFCR*CSRISL
Trigger: CAGAGATATTCTTGAACACCACCTGCAAAACAACAA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATGGATGGCCATTTTATaGAGAGGCAGGTCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSWMAIL*RGRSEP
Trigger: TGGCTCGGACCTGCCTCTCCATAAAATGGCCATCCA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACTCCTCTGCACCCTGTaGTTCATTCCTTCAAATTGT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGLLCTL*FIPSNC
Trigger: ACAATTTGAAGGAATGAACCACAGGGTGCAGAGGAG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTCCTCTGCACCCTGTaGTTCATTCCTTCAAATTGT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTLLCTL*FIPSNC
Trigger: ACAATTTGAAGGAATGAACCACAGGGTGCAGAGGAG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACCGATGTTTCACAGCTaGAACAGTAGGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTPMFHS*NSRILK
Trigger: CTTAAGGATCCTACTGTTCCAGCTGTGAAACATCGG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAATCTGGGTCTTGGCTTaGTCGAGATCCTCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSIWVLA*SRSSLS
Trigger: GCTAAGGGAGGATCTCGACCAAGCCAAGACCCAGAT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATTCCTCAGGTTTCTATaGTCATCCTGGAGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTFLRFL*SSWSLS
Trigger: ACTGAGACTCCAGGATGACCATAGAAACCTGAGGAA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTTTCTAGCTAAAGCTTaGCAGAACAGCTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWFLAKA*QNSSVF
Trigger: GAAAACTGAGCTGTTCTGCCAAGCTTTAGCTAGAAA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAAAGAGTTGTTCAATTaGGCCACAGATTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTKELFN*ATDSNC
Trigger: ACAGTTTGAATCTGTGGCCCAATTGAACAACTCTTT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCGTTACACTGTCCAGTaGTCCTACTTTAAGACTTTC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPRYTVQ*SYFKTF
Trigger: GAAAGTCTTAAAGTAGGACCACTGGACAGTGTAACG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAACTGAAGTTGTAGTTTaGCTTCGGGGCTGGATATCA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTTEVVV*LRGWIS
Trigger: TGATATCCAGCCCCGAAGCCAAACTACAACTTCAGT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTGGAATGCCATATTTTaGAATGAAGTTGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGWNAIF*NEVVVC
Trigger: ACAGACCACAACTTCATTCCAAAATATGGCATTCCA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTGGCCAGCAAATGACTaGTATTTTCTATCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSWPAND*YFLSKP
Trigger: AGGCTTGGATAGAAAATACCAGTCATTTGCTGGCCA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCATTCGCTGAATCTGTaGAAGGCTTTCCATTATTTT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTHSLNL*KAFHYF
Trigger: AAAATAATGGAAAGCCTTCCACAGATTCAGCGAATG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGCCTTTCAGTTACAATaGATTCCAATTCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGAFQLQ*IPIQKG
Trigger: ACCTTTCTGAATTGGAATCCATTGTAACTGAAAGGC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGTCTTCAAGTTGGGTaGTATAGGTTTTCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPGLQVG*YRFSVL
Trigger: AAGAACTGAAAACCTATACCACCCAACTTGAAGACC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACGCCACTTTACTTTTaGTTTGTTTTAAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGTPLYF*FVLSGH
Trigger: ATGGCCACTTAAAACAAACCAAAAGTAAAGTGGCGT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTTGGCAGAGTATGCTTaGATCAACAACATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPLAEYA*INNMSA
Trigger: TGCTGACATGTTGTTGATCCAAGCATACTCTGCCAA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CACCTTCCATTTGCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATAGCTGGAGCAGACTCTaGGCCTTCTGCAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: HLPFACSDARDRKGCREHSWSRL*AFCNWS
Trigger: AGACCAGTTGCAGAAGGCCCAGAGTCTGCTCCAGCT...ATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGCAAATGGAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CCA 90 bp TTTGCACAGGCATCGGAGTCGTGCAGTAGGACGTCACAGATGTTAAACACGGACGGACTCTGCGGGTTGTaGGAGTCGATCCAGGACACT +
Preference number: 4 (lower is better)
Translates to: FAQASESCSRTSQMLNTDGLCGL*ESIQDT
Trigger: AGTGTCCTGGATCGACTCCCACAACCCGCAGAGTCC...GTCCGTGTTTAACATCTGTGACGTCCTACTGCACGACTCCGATGCCTGTGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACCCGGGAGGAGCATGTaGGTGCTGGACTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSPGRSM*VLDSAG
Trigger: ACCCGCAGAGTCCAGCACCCACATGCTCCTCCCGGG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTCAATATCAGGTGATTaGGCTGTCAGTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSISGD*AVSAST
Trigger: TGTGCTGGCACTGACAGCCCAATCACCTGATATTGA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATCAATATCAGGTGATTaGGCTGTCAGTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASISGD*AVSAST
Trigger: TGTGCTGGCACTGACAGCCCAATCACCTGATATTGA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTTTGCCACCATCCGTGCCTGGAGGTAATAGTAGCTTTCCATAGGGTGGTTTATAGCGCTCCAGTGCCGTaGCCGTGGCCCGAATCCATT +
Preference number: 4 (lower is better)
Translates to: LCHHPCLEVIVAFHRVVYSAPVP*PWPESI
Trigger: AATGGATTCGGGCCACGGCCACGGCACTGGAGCGCT...ATAAACCACCCTATGGAAAGCTACTATTACCTCCAGGCACGGATGGTGGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAATCATCTCTGCCAGCTaGGGCTCCATGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSIISAS*GSMSFQ
Trigger: CTGGAAAGACATGGAGCCCCAGCTGGCAGAGATGAT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCTGGCCTTGATCAACTaGTCACCCATCTGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHLALIN*SPICFN
Trigger: GTTAAAGCAGATGGGTGACCAGTTGATCAAGGCCAG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCATAAACAACAGGCTTaGAAAGCTCAGACTCAATTC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAHKQQA*KAQTQF
Trigger: GAATTGAGTCTGAGCTTTCCAAGCCTGTTGTTTATG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATCTTCAGTTCCTCTTTaGCACTCGTGTACAACACCT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSSVPL*HSCTTP
Trigger: AGGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCCCACGTCGCCTGTGTaGTCCCACTCCAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCPTSPV*SHSRGM
Trigger: CATCCCCCTGGAGTGGGACCACACAGGCGACGTGGG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGGAACATGCCACGAGTaGCCATCCGAAATGGATTTA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHGTCHE*PSEMDL
Trigger: TAAATCCATTTCGGATGGCCACTCGTGGCATGTTCC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCACGTCTCCTCGATTTTCATGCGCCGCTCCATGGACATGGCACAAATGTTCCTGTTTATAAGGGGTGCTaGACGCAGGGGGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: PRLLDFHAPLHGHGTNVPVYKGC*TQGEQV
Trigger: CACCTGTTCCCCCTGCGTCCAGCACCCCTTATAAAC...AGGAACATTTGTGCCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGACGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCTCAGTTCTATTTCCTaGATATCAGAGGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGLSSIS*ISEGGF
Trigger: AAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTACTTTGGAGCTCTGTaGATTCGGGGCTCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQYFGAL*IRGSRF
Trigger: AAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGCTGGCGGAGTCTACTTTGGAGCTCTGTGGATTCGGGGCTCTCGGTTTGCAGATACTTTGGAGCTCTGTaGATTCGGGGCTCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: SWRSLLWSSVDSGLSVCRYFGAL*IRGSRF
Trigger: AAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTA...TCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAAGGCCATTAAATCTTaGGACACTTGCTCCCGTAAC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWKAIKS*DTCSRN
Trigger: GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTAATTTCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCGATGTTGCAGGAGGCTaGTCCCCCGAGTCTACCTCG +
Preference number: 4 (lower is better)
Translates to: VISCWKPFSWRILSSASLDVAGG*SPESTS
Trigger: CGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATC...GAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGAAATTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGAGGAAGGAGCGCTGTaGCCGTGTGCTGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLEEGAL*PCAAGD
Trigger: GTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAATTCACAAAGTGCTTaGCTCTTCAGGAAACTGACA +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLANSQSA*LFRKLT
Trigger: TGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGAACCATTTCTAGGGTaGAATGTCCTCGCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAEPFLG*NVLACF
Trigger: GAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCTGAACAGAACATTTTaGTGTATAACCGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSLNRTF*CITGSS
Trigger: TGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CAA 72 bp AGGGGGAACAGGTGGAACATTCCTGTCACCTTCCATTaGCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RGNRWNIPVTFH*LVVMLGTGRAV
Trigger: GACAGCCCTTCCTGTCCCGAGCATCACTACAAGCAAATGGAAGGTGACAGGAATGTTCCACCTGTTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCCCATTTCTCCAACTTaGCTTAAAATCGGTCACATT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGPISPT*LKIGHI
Trigger: AATGTGACCGATTTTAAGTCAAGTTGGAGAAATGGG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCCCATTTCTCCAACTTaGCTTAAAATCGGTCACATT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPPISPT*LKIGHI
Trigger: AATGTGACCGATTTTAAGTCAAGTTGGAGAAATGGG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCTTGTTCTGCAATTCTaGAGGCCTCTCTCAGATTGT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHLVLQF*RPLSDC
Trigger: ACAATCTGAGAGAGGCCTTCAGAATTGCAGAACAAG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACAGATCCCGTTTTATTaGCAGGACATCCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGQIPFY*QDIQKG
Trigger: TCCTTTTTGGATGTCCTGTCAATAAAACGGGATCTG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCAGGAGAATGTTCGAATaGTGCTCAAATCTATCCATC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPRRMFE*CSNLSI
Trigger: GATGGATAGATTTGAGCATCATTCGAACATTCTCCT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTGCTTCCTTGTGTTTTaGAATGAGTTCACCGGGGCT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQCFLVF*NEFTGA
Trigger: AGCCCCGGTGAACTCATTTCAAAACACAAGGAAGCA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCAGTGAGGGTCTTCTaGACCAGCGGGGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSVRVF*TSGASL
Trigger: CAGCGAGGCCCCGCTGGTTCAGAAGACCCTCACTGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGATTTTGCAGCTCATTaGCTTTCCGCTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLADFAAH*LSAHLQ
Trigger: CTGAAGATGAGCGGAAAGTCAATGAGCTGCAAAATC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGCACTTTCTGATCTGTaGAAGAATGTCATCTGGGAG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHALSDL*KNVIWE
Trigger: CTCCCAGATGACATTCTTTCACAGATCAGAAAGTGC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTCTTGCAATTCCTTCTaGGATGCCTCCAAAGTAACA +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWSCNSF*DASKVT
Trigger: TGTTACTTTGGAGGCATCTCAGAAGGAATTGCAAGA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGCTTTCTCAATTCTCTaGCTTAAAATTTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPAFSIL*LKIWAL
Trigger: CAATGCCCAAATTTTAAGTCAGAGAATTGAGAAAGC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCCCAAACTTGCTCCTaGAATGCTTCACAATTGTCC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQAQTCS*NASQLS
Trigger: GGACAATTGTGAAGCATTTCAGGAGCAAGTTTGGGC...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGTTTCCACAGCCCCTaGGCTTTCAGGAACATTCTG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSFHSP*AFRNIL
Trigger: CAGAATGTTCCTGAAAGCTCAGGGGCTGTGGAAACT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACTCCTCAAATTGTTCTaGCTTTTCTGGGTGATCCTG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLALLKLF*LFWVIL
Trigger: CAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGGATTGGCCAGCAAATaGCTGGTATTTTCTATCCAA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTGLASK*LVFSIQ
Trigger: TTGGATAGAAAATACCAGTCATTTGCTGGCCAATCC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGTCAGCTTGGTCTGGTaGCATATGTTCAAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQVSLVW*HMFKGE
Trigger: TTCTCCCTTGAACATATGTCACCAGACCAAGCTGAC...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATCACTGTGCTTCTCCTaGAGCATCATCTGGACTTTT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASLCFS*SIIWTF
Trigger: AAAAGTCCAGATGATGCTTCAGGAGAAGCACAGTGA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATACACTGCTGAGGCACTaGCTGAGGGTCAGGAATAGT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDTLLRH*LRVRNS
Trigger: ACTATTCCTGACCCTCAGTCAGTGCCTCAGCAGTGT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACATTGTATCCAAGTCCTaGGACACATTGAGGGACTGT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHIVSKS*DTLRDC
Trigger: ACAGTCCCTCAATGTGTCTCAGGACTTGGATACAAT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATCAGTTTCTTTCAGGTaGAGAAGCTGGTTCCCGATA +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASVSFR*RSWFPI
Trigger: TATCGGGAACCAGCTTCTTCACCTGAAAGAAACTGA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCTTTTTCCTGTTGGTaGAGTCTATCCAAATTCTCT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSFSCW*SLSKFS
Trigger: AGAGAATTTGGATAGACTTCACCAACAGGAAAAAGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGCTGGCGGAGTCTACTTTGGAGCTCTGTGGATTCGGGGCTCTCGGTTTGCAGAATTTGTTGCTGGCCTTaGTCAACTGGTCACCCATCT +
Preference number: 4 (lower is better)
Translates to: SWRSLLWSSVDSGLSVCRICCWP*STGHPS
Trigger: AGATGGGTGACCAGTTGATCAAGGCCAGCAACAAAT...TCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR TCA 90 bp TTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGCCGATCTCAGCTGCTCTTaGTTTGTTGCTGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: FSSCISSLRHSRRARGSADLSCS*FVAGLD
Trigger: ATCAAGGCCAGCAACAAATCAAGAGCAGCTGAGATC...GGCAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAAGCAGAGCTAGGTACTaGACAGAACATTTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSRARY*TEHFGV
Trigger: TACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAGCAGAGCTAGGTACTaGACAGAACATTTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWSRARY*TEHFGV
Trigger: TACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATGGGTATCTTGCAGATaGTTCCTGAGTTGTATCGTT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTWVSCR*FLSCIV
Trigger: AACGATACAACTCAGGAATCATCTGCAAGATACCCA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACACCTGGAGTTTGTCTaGTCTGCCATACTTGATCCG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSHLEFV*SAILDP
Trigger: CGGATCAAGTATGGCAGATCAGACAAACTCCAGGTG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTCTTCCTGTTCAGCTTaGAATGAAATATGGAGATCG +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSSCSA*NEIWRS
Trigger: CGATCTCCATATTTCATTGCAAGCTGAACAGGAAGA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTCTTTGTTGGATCTATaGTTCACACTCTTCATGTCA +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWSLLDL*FTLFMS
Trigger: TGACATGAAGAGTGTGAAGCATAGATCCAACAAAGA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGATACTGCAGAAACTGTaGCACATAGGTCATGATGGA +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWILQKL*HIGHDG
Trigger: TCCATCATGACCTATGTGGCACAGTTTCTGCAGTAT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAACAGATTTGGCTTCTaGCTCCCAGATTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLANRFGF*LPDFHL
Trigger: CAAGTGGAAATCTGGGAGGCAGAAGCCAAATCTGTT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGATAATGCTTTCTTCTTaGAGAGGCCTTAACACTGAT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWIMLSS*RGLNTD
Trigger: ATCAGTGTTAAGGCCTCTGCAAGAAGAAAGCATTAT...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGAGGACTCCATGACCTaGAATTCAAGAGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTEDSMT*NSRGIS
Trigger: TGAAATACCTCTTGAATTGCAGGTCATGGAGTCCTC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGAGGACTCCATGACCTaGAATTCAAGAGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGEDSMT*NSRGIS
Trigger: TGAAATACCTCTTGAATTGCAGGTCATGGAGTCCTC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTTTTGCTGTAGAATCTaGTGTTGTATCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPFCCRI*CCISSS
Trigger: ACTAGAGGAGATACAACAGCAGATTCTACAGCAAAA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCAGTACGCTGTCCACCTaGTTTATTTTACTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSTLST*FILLFL
Trigger: AAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTCGCTGCTCTCAGCCTaGTTCATGATGGTCTCTATT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSLLSA*FMMVSI
Trigger: AATAGAGACCATCATGAAGCAGGCTGAGAGCAGCGA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCAGTGGCTTAATGGCTaGTTTCTTTGCTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHQWLNG*FLCFQL
Trigger: CAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCTTCAAAGTAATAAGTaGCTGAAGCAAATTGTCCAA +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTLQSNK*LKQIVQ
Trigger: TTGGACAATTTGCTTCAGGCACTTATTACTTTGAAG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTTAACTGTAGATGTTaGTGCTGCTGTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTLNCRC*CCCCRE
Trigger: TTCTCTGCAACAGCAGCAGCAACATCTACAGTTAAG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATGGTCAAGGCAATCATaGTTTGGTTCCCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSWSRQS*FGSLPV
Trigger: AACGGGCAGGGAACCAAAGCATGATTGCCTTGACCA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGATAATGCCTGATATTTaGCATGTTCTTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGIMPDI*HVLPQM
Trigger: CATTTGAGGAAGAACATGGCAAATATCAGGCATTAT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCAGTGATGCTCTCCACTaGCCTGGTGACTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SCCKESSSSFARAWHMDSSDALH*PGDCFF
Trigger: AAAGAAGCAGTCACCAGGGCAGTGGAGAGCATCACT...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGAATGTAAAAGATTGTaGTTCTGTTCTGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTECKRL*FCSESS
Trigger: GGAAGATTCAGAACAGAAGCACAATCTTTTACATTC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGAATGTAAAAGATTGTaGTTCTGTTCTGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGECKRL*FCSESS
Trigger: GGAAGATTCAGAACAGAAGCACAATCTTTTACATTC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGCTTATTTTCCCATATaGTTCCTGAACAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAAYFPI*FLNNCS
Trigger: GGAACAATTGTTCAGGAAGCATATGGGAAAATAAGC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCCAGAACCTGTTGCTaGTGGAAATCTTTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSRTCC*WKSFCL
Trigger: CAGACAAAAAGATTTCCAGCAGCAACAGGTTCTGGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTGCAACAAAGCATCTTaGTGGCTCTCAGTGACGAAA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHCNKAS*WLSVTK
Trigger: TTTCGTCACTGAGAGCCAGCAAGATGCTTTGTTGCA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTATTTTGGCAGAGTATaGTTGGATCAACAACATGTC +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAYFGRV*LDQQHV
Trigger: GACATGTTGTTGATCCAAGCATACTCTGCCAAAATA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATATTCCATGTACACGGTaGCACTGGCGGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDIPCTR*HWRFIS
Trigger: GGAGATGAACCGCCAGTGGCACCGTGTACATGGAAT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACCCAACTCCCTTCACTaGTCTCAGCTTCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSPNSLH*SQLHLA
Trigger: TGCAAGATGAAGCTGAGAGCAGTGAAGGGAGTTGGG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCAGACTCTGGGCCTTCTaGAACTGGTCTGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: SLSPRLRQESVWISLGSSRLWAF*NWSAMA
Trigger: AGCCATTGCAGACCAGTTGCAGAAGGCCCAGAGTCT...GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGAGCTGTTGAAACTTTaGTTCCTGCTGCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQELLKL*FLLLQP
Trigger: AGGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTC...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCACATCCACTTTGAGTaGTTCTTCTATCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSHIHFE*FFYLLQ
Trigger: TTGGAGAAGATAGAAGAAGCACTCAAAGTGGATGTG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGACAGTGCTCTGGAACTaGTTAATCATCTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQTVLWN*LIISAS
Trigger: GCTGGCAGAGATGATTAAGCAGTTCCAGAGCACTGT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTGTGCCTTTAAAACTTaGAGCCTGCTTTTCAACTCC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWCAFKT*SLLFNS
Trigger: GGAGTTGAAAAGCAGGCTGCAAGTTTTAAAGGCACA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATGTGCCTTTAAAACTTaGAGCCTGCTTTTCAACTCC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTCAFKT*SLLFNS
Trigger: GGAGTTGAAAAGCAGGCTGCAAGTTTTAAAGGCACA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACTGGTCACCCATCTaGTTTAACTGTAACTTGTTT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLANWSPI*FNCNLF
Trigger: AAACAAGTTACAGTTAAAGCAGATGGGTGACCAGTT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCACGTCTCCTCGATTTTCATGCGCCGCTCCATGGACATGGCACAAATGTTCCTTCGTCTAAAAACTTCTaGCACAGGCGCCACGTCTCC +
Preference number: 4 (lower is better)
Translates to: PRLLDFHAPLHGHGTNVPSSKNF*HRRHVS
Trigger: GGAGACGTGGCGCCTGTGGCAGAAGTTTTTAGACGA...AGGAACATTTGTGCCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGACGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTGCTGGCCGTGTCTGTaGGGTTCTCCCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKICWPCL*GSPGPA
Trigger: GGCTGGCCCGGGAGAACCGCACAGACACGGCCAGCA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCCCTCGTGGACCATCTaGTTCAGCCTGCTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCPSWTI*FSLLAV
Trigger: CACGGCCAGCAGGCTGAAGCAGATGGTCCACGAGGG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACCTTCCATTTGCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATTCACTCTCTGAGAAGTaGTCCACGTTGGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HLPFACSDARDRKGCREHSLSEK*STLVSC
Trigger: GCAGCTGACCAACGTGGAGCACTTCTCAGAGAGTGA...ATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGCAAATGGAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCAGTCTCTTCACTCTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCGAGAGCCCGGGGGTCTaGCTTTGGATCGGTGACATG +
Preference number: 4 (lower is better)
Translates to: CSLFTLSSISWISEGGFAESPGV*LWIGDM
Trigger: CATGTCACCGATCCAAAGGCAGACCCCCGGGCTCTC...GGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAGAGTGAAGAGACTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAGCTCCTTTTCCAGTTaGATTAGTTCCCTCCGACAC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSSFSS*ISSLRH
Trigger: GTGTCGGAGGGAACTAATGCAACTGGAAAAGGAGCT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGTTGTTGGCCTGAGTaGAGCTGTAGTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSCWPE*SCSLLR
Trigger: CCGAAGAAGACTACAGCTGCACTCAGGCCAACAACT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTGTACAACACCTCTGAGGAATTTGGGCAGGCTGCCGTCCTCTCAGCTGACTTGAGTTGTTGGCCTGAGTaGAGCTGTAGTCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: VYNTSEEFGQAAVLSADLSCWPE*SCSLLR
Trigger: CCGAAGAAGACTACAGCTGCACTCAGGCCAACAACT...CAAGTCAGCTGAGAGGACGGCAGCCTGCCCAAATTCCTCAGAGGTGTTGTACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACCAGAATTCACAAAGTaGTTGGCTCTTCAGGAAACT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTPEFTK*LALQET
Trigger: AGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGTGGAATGTCCTCGCTTaGTTCTATAATATATGTGAT +
Preference number: 4 (lower is better)
Translates to: GEPPVEPGDPSKHLLAVAWNVLA*FYNICD
Trigger: ATCACATATATTATAGAAGCAAGCGAGGACATTCCA...CGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGGCGCCCCGCTTGCCTaGCTCTCTGGATCGCGCCTT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRGAPLA*LSGSRL
Trigger: AAGGCGCGATCCAGAGAGCCAGGCAAGCGGGGCGCC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGGGAGAAGTGTGCCTaGCCAACTGTGAGTTTATCC +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSREKCA*PTVSLS
Trigger: GGATAAACTCACAGTTGGCCAGGCACACTTCTCCCT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCTGGTTCCAGCAATCTaGGGATTTTTAATTCTTGTT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWLVPAI*GFLILV
Trigger: AACAAGAATTAAAAATCCCCAGATTGCTGGAACCAG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCTCCAATTTGTTAGGTaGTACCAATGGCAAGTGATT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPLQFVR*YQWQVI
Trigger: AATCACTTGCCATTGGTACCACCTAACAAATTGGAG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCTCCAATTTGTTAGGTaGTACCAATGGCAAGTGATT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSLQFVR*YQWQVI
Trigger: AATCACTTGCCATTGGTACCACCTAACAAATTGGAG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATGTTCTAGATTCCACTaGGCTAGTGTCTCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLACSRFH*ASVSKG
Trigger: ACCCTTTGAGACACTAGCCCAGTGGAATCTAGAACA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTTTACCACATTGATCTaGACTTTCTCTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGFTTLI*TFSLAS
Trigger: AGAAGCTAAAGAGAAAGTCCAGATCAATGTGGTAAA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGATGGCCATTTTATaGAGAGGCAGGTCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDWMAIL*RGRSEP
Trigger: TGGCTCGGACCTGCCTCTCCATAAAATGGCCATCCA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACCGATGTTTCACAGCTaGAACAGTAGGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAPMFHS*NSRILK
Trigger: CTTAAGGATCCTACTGTTCCAGCTGTGAAACATCGG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAGATTTTTGCAGACCTaGTTTATCTTGTCTACAACT +
Preference number: 4 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTRFLQT*FILSTT
Trigger: AGTTGTAGACAAGATAAACCAGGTCTGCAAAAATCT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAGATTTTTGCAGACCTaGTTTATCTTGTCTACAACT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGRFLQT*FILSTT
Trigger: AGTTGTAGACAAGATAAACCAGGTCTGCAAAAATCT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGTCTTCCCGATCTGGGTCTTaGCTTGGTCGAGATCCTCCC +
Preference number: 4 (lower is better)
Translates to: FLRFLWSSWSLSSCCKESSRSGS*LGRDPP
Trigger: GGGAGGATCTCGACCAAGCCAAGACCCAGATCGGGA...AGACTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTGTCTCAGTAATGTCTaGTATCTATCCATCAAACAT +
Preference number: 4 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGCLSNV*YLSIKH
Trigger: ATGTTTGATGGATAGATACCAGACATTACTGAGACA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTCCATGTCAGTCACGTaGTTTGATAAATTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCSMSVT*FDKFSH
Trigger: ATGGGAGAATTTATCAAACCACGTGACTGACATGGA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTCATTTAGTTTaGAATGCCATAGATCTAACT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWPAHLV*NAIDLT
Trigger: AGTTAGATCTATGGCATTCCAAACTAAATGAGCTGG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTTCTTGAGCCTGTCCTaGGTCCTGTTCAACAATGTC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQFLSLS*VLFNNV
Trigger: GACATTGTTGAACAGGACCCAGGACAGGCTCAAGAA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATGGCCAGCAAATGACTaGTATTTTCTATCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGWPAND*YFLSKP
Trigger: AGGCTTGGATAGAAAATACCAGTCATTTGCTGGCCA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCATTCGCTGAATCTGTaGAAGGCTTTCCATTATTTT +
Preference number: 4 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAHSLNL*KAFHYF
Trigger: AAAATAATGGAAAGCCTTCCACAGATTCAGCGAATG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTACACTATCTCAGCAATaGTTTTCTTCATGGGACGTA +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCTLSQQ*FSSWDV
Trigger: TACGTCCCATGAAGAAAACCATTGCTGAGATAGTGT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATCATGTTGGCAATACTaGGGCCACATTTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSCWQY*GHIFLA
Trigger: TGCTAAGAAAATGTGGCCCCAGTATTGCCAACATGA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTCATGTTGGCAATACTaGGGCCACATTTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWSCWQY*GHIFLA
Trigger: TGCTAAGAAAATGTGGCCCCAGTATTGCCAACATGA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGTATCGTTATCATGTTaGCAATACTGGGGCCACATT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGVSLSC*QYWGHI
Trigger: AATGTGGCCCCAGTATTGCCAACATGATAACGATAC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTCCAGTTTTGCGATCTaGCCCTCTAATTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSSFAI*PSNSGQ
Trigger: CTGTCCTGAATTAGAGGGCCAGATCGCAAAACTGGA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAGAGCTTGCAGCCTGTaGAGCTCATGGTCAATTTTC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQRACSL*SSWSIF
Trigger: GAAAATTGACCATGAGCTCCACAGGCTGCAAGCTCT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACTGGGCCTTCTGCAACTaGTCTGCAATGGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GFWVPCKAIKSWDTCSRNWAFCN*SAMAWF
Trigger: GAACCAAGCCATTGCAGACCAGTTGCAGAAGGCCCA...GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTCAATATCAGGTGATTaGGCTGTCAGTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSISGD*AVSAST
Trigger: TGTGCTGGCACTGACAGCCCAATCACCTGATATTGA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCATCTTCTCCAAAAGTTaGATCCACTTTTCACAGCAA +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPIFSKS*IHFSQQ
Trigger: TTGCTGTGAAAAGTGGATCCAACTTTTGGAGAAGAT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTAATTTCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCCTCTGCCGAACACCCTaGACAGCATTCTGCCACCGA +
Preference number: 4 (lower is better)
Translates to: VISCWKPFSWRILSSASLLCRTP*TAFCHR
Trigger: TCGGTGGCAGAATGCTGTCCAGGGTGTTCGGCAGAG...GAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGAAATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCATAAACAACAGGCTTaGAAAGCTCAGACTCAATTC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPHKQQA*KAQTQF
Trigger: GAATTGAGTCTGAGCTTTCCAAGCCTGTTGTTTATG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCACGTCTCCTCGATTTTCATGCGCCGCTCCATGGACATGGCACAAATGTTCCTTCATGCGCCGCTCCATaGACATGGCACAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: PRLLDFHAPLHGHGTNVPSCAAP*TWHKCS
Trigger: GGAACATTTGTGCCATGTCCATGGAGCGGCGCATGA...AGGAACATTTGTGCCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAAATGTAATTTCCTGTTaGAAGCCATTCAGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTNVISC*KPFSWR
Trigger: GCGCCAACTGAATGGCTTCCAACAGGAAATTACATT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATAACTGGTGGAAGTCCTaGCACTGCATGAGCGACTGT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDNWWKS*HCMSDC
Trigger: ACAGTCGCTCATGCAGTGCCAGGACTTCCACCAGTT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR CCA 90 bp TCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCAACTGGTGGAAGTCCTaGCACTGCATGAGCGACTGT +
Preference number: 4 (lower is better)
Translates to: SLSPRLRQESVWISLGSSNWWKS*HCMSDC
Trigger: ACAGTCGCTCATGCAGTGCCAGGACTTCCACCAGTT...GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553289.5
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACAAGGCCATTAAATCTTaGGACACTTGCTCCCGTAAC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHKAIKS*DTCSRN
Trigger: GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGAGGAAGGAGCGCTGTaGCCGTGTGCTGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKREEGAL*PCAAGD
Trigger: GTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATACCGGGCAAAGTTGTTaGCCTGAGTGCAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDTGQSC*PECSCS
Trigger: ACTACAGCTGCACTCAGGCCAACAACTTTGCCCGGT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTAATTTCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCTGGCAATCAGGCAGGTaGTGTAGCACTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VISCWKPFSWRILSSASLWQSGR*CSTVAS
Trigger: GCTGGCCACAGTGCTACACCACCTGCCTGATTGCCA...GAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGAAATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCTGGGGCCACGTGCTaGGCACCCTTGGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSGATC*APLAIR
Trigger: CCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAATTCACAAAGTGCTTaGCTCTTCAGGAAACTGACA +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGNSQSA*LFRKLT
Trigger: TGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACTGAACAGAACATTTTaGTGTATAACCGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGLNRTF*CITGSS
Trigger: TGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CAA 72 bp GCTTTTAAGAGGGATTCAGTCATCCCGATCTGGGTCTaGGCTTGGTCGAGATCCTCCCTTAGCTCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: AFKRDSVIPIWV*AWSRSSLSSAV
Trigger: CACTGCTGAGCTAAGGGAGGATCTCGACCAAGCCAAGACCCAGATCGGGATGACTGAATCCCTCTTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGCAAGCTTCTCAATATaGAAGTGCAGGATAATTGTC +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTASFSI*KCRIIV
Trigger: GACAATTATCCTGCACTTTCATATTGAGAAGCTTGC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAAGTGGCGCATTGTTCCTaGGCCCACAAAAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LPWQLSPPWELSVFHFLEVAHCS*AHKRRA
Trigger: GGCCCTTCTTTTGTGGGCTCAGGAACAATGCGCCAC...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp TTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGTCTTCTTTCACCTTTCCCTaGGCCTCCTCTCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: FLRFLWSSWSLSSCCKESSFTFP*ASSPVP
Trigger: TGGGACTGGAGAGGAGGCTCAGGGAAAGGTGAAAGA...AGACTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAGGAGAATGTTCGAATaGTGCTCAAATCTATCCATC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWRRMFE*CSNLSI
Trigger: GATGGATAGATTTGAGCATCATTCGAACATTCTCCT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAGCCCTCATCATATATaGTTCAAGTTCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASPHHI*FKFLLG
Trigger: TCCCAGAAGGAACTTGAATCATATATGATGAGGGCT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATTGTTGACTCTTCTGTaGAGGCAGCTCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSLLTLL*RQLFTQ
Trigger: CTGTGTGAAGAGCTGCCTTCACAGAAGAGTCAACAA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCTGCGATCAGCATCAATaGGATGAAATCCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: SCCKESSSSFARAWHMDSCDQHQ*DEIPGW
Trigger: CCATCCAGGGATTTCATCTCATTGATGCTGATCGCA...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACATTTGTTTTCCTCAGTaGATTCCTCCTGTACCCCAT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHICFPQ*IPPVPH
Trigger: ATGGGGTACAGGAGGAATTCACTGAGGAAAACAAAT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACATTTTGCCTTCGGATaGATTCAAAACCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGHFAFG*IQNHKG
Trigger: TCCCTTATGGTTTTGAATTCATCCGAAGGCAAAATG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGAATCCTGCAGTTGTTaGAGAAGACTTTCGTGTAGA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHESCSC*RRLSCR
Trigger: TCTACACGAAAGTCTTCTTCAACAACTGCAGGATTC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATGCCATCTTGTAAACTaGGTCTATTCTCTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTCHLVN*VYSLVP
Trigger: AGGAACTAGAGAATAGACTCAGTTTACAAGATGGCA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATGCCATCTTGTAAACTaGGTCTATTCTCTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGCHLVN*VYSLVP
Trigger: AGGAACTAGAGAATAGACTCAGTTTACAAGATGGCA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAATCTTCTGCCCCACTaGAGATGTATTTTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLANLLPH*RCILLD
Trigger: GTCAAGCAAAATACATCTTCAGTGGGGCAGAAGATT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCATTCCTGAAAATCTCTaGGGACACAATATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPIPENL*GHNIGF
Trigger: AAAGCCAATATTGTGTCCTCAGAGATTTTCAGGAAT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACAACAAGGCTTTCATTaGAGATTCAACTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAQQGFH*RFNCSK
Trigger: CTTGCTGCAGTTGAATCTTCAATGAAAGCCTTGTTG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCCAAAGTAACATGGTaGTGTTTTAGTTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSKVTW*CFSSAS
Trigger: GGAAGCTGAACTAAAACATCACCATGTTACTTTGGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTCTTGCAATTCCTTCTaGGATGCCTCCAAAGTAACA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSCNSF*DASKVT
Trigger: TGTTACTTTGGAGGCATCTCAGAAGGAATTGCAAGA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCGCCCAAACTTGCTCCTaGAATGCTTCACAATTGTCC +
Preference number: 4 (lower is better)
Translates to: SCCKESSSSFARAWHMDSAQTCS*NASQLS
Trigger: GGACAATTGTGAAGCATTTCAGGAGCAAGTTTGGGC...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCCTGTAAAGTATACTaGAGTTGTAGTTTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSCKVY*SCSLAS
Trigger: CGAAGCCAAACTACAACTTCAGTATACTTTACAGGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATACTTCTGATGCGCTaGAGAAGTAGAGTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAILLMR*RSRVSN
Trigger: GTTACTGACTCTACTTCTTCAGCGCATCAGAAGTAT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGGATTGGCCAGCAAATaGCTGGTATTTTCTATCCAA +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAGLASK*LVFSIQ
Trigger: TTGGATAGAAAATACCAGTCATTTGCTGGCCAATCC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGCTTCAAATGCTGGTaGAGGTTTAGTACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDCFKCW*RFSTVA
Trigger: GGCCACCGTACTAAACCTTCACCAGCATTTGAAGCA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGTCATGCTTCCAAAGTaGAGACCAAGACTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDVMLPK*RPRLRR
Trigger: TCGCCTCAGTCTTGGTCTTCACTTTGGAAGCATGAC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTTTGATGAGAGTTCATaGTGCAGATATTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGFDESS*CRYCHL
Trigger: TAAGTGGCAATATCTGCATCATGAACTCTCATCAAA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGATATTTTCCTGTGTCTaGAGGTTACTTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWIFSCV*RLLASW
Trigger: CCAAGAAGCAAGTAACCTTCAGACACAGGAAAATAT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAATATTTTCCTGTGTCTaGAGGTTACTTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGIFSCV*RLLASW
Trigger: CCAAGAAGCAAGTAACCTTCAGACACAGGAAAATAT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGTCCTGAGACACATTaGGGGACTGTTCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSPETH*GTVLSS
Trigger: ACTGGAAAGAACAGTCCCTCAATGTGTCTCAGGACT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCTGGAAGTTGAGTTATaGGCATTGTCCATTTTTGTT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPLEVEL*ALSIFV
Trigger: AACAAAAATGGACAATGCTCATAACTCAACTTCCAG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCTTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGTGTTTCCAGACATGCTaGTGTTTGCGAGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: PFPVALVPSDTLGEPGGLCFQTC*CLRAVE
Trigger: TTCAACAGCTCGCAAACATCAGCATGTCTGGAAACA...CAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTCTTTTTCCTGTTGGTaGAGTCTATCCAAATTCTCT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPSFSCW*SLSKFS
Trigger: AGAGAATTTGGATAGACTTCACCAACAGGAAAAAGA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACCGATCCGTCAGCTTTaGGAATTCTGTAATAAATTC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGPIRQL*EFCNKF
Trigger: GAATTTATTACAGAATTCTCAAAGCTGACGGATCGG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGATACAACCCATGTATTaGGTCTGTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWIQPMY*VCLQSP
Trigger: AGGAGATTGAAGACAGACTCAATACATGGGTTGTAT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCATACAACCCATGTATTaGGTCTGTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: LVVMLGTGRAVGNMPRVAIQPMY*VCLQSP
Trigger: AGGAGATTGAAGACAGACTCAATACATGGGTTGTAT...GGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGCTGTGACCCGCCTCTaGAGGTTGTCCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEAVTRL*RLSQRW
Trigger: CCAGCGCTGGGACAACCTTCAGAGGCGGGTCACAGC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCAGGGACTGAGGAGATaGCGGTTCCTCGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCQGLRR*RFLALS
Trigger: GGAGAGAGCGAGGAACCGTCATCTCCTCAGTCCCTG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACAGGGACTGAGGAGATaGCGGTTCCTCGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSQGLRR*RFLALS
Trigger: GGAGAGAGCGAGGAACCGTCATCTCCTCAGTCCCTG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCTGACTGCTGCTCTGTaGTACCGGCCAGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLLTAAL*YRPVPR
Trigger: ACGGGGGACTGGCCGGTATCACAGAGCAGCAGTCAG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCACAGCAGCAGATTTTaGCTCAACTGGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDHSSRF*LNWWKS
Trigger: GGACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATCTTGGGGTATCAGCTaGCATGTAAGGATATGTAAG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASWGIS*HVRICK
Trigger: CTTACATATCCTTACATGTCAGCTGATACCCCAAGA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCAGACATTTGCCATCTTaGTTGCACTTTAGAGCATTT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSRHLPS*LHFRAF
Trigger: AAATGCTCTAAAGTGCAAGCAAGATGGCAAATGTCT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCTTTGGCAATAAGATaGTTCAAAGATTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWPLAIR*FKDSSI
Trigger: AATGGAAGAATCTTTGAAGCATCTTATTGCCAAAGG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCATAATGCTTTCTTCTTaGAGAGGCCTTAACACTGAT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSIMLSS*RGLNTD
Trigger: ATCAGTGTTAAGGCCTCTGCAAGAAGAAAGCATTAT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCTGAATTTGTTGTTTTaGAGGTGGTGTTCAAGAATA +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWLNLLF*RWCSRI
Trigger: TATTCTTGAACACCACCTGCAAAACAACAAATTCAG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCAAGAGGTATTTCACTaGTTTGGAGCAAAAACTGTA +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPQEVFH*FGAKTV
Trigger: TACAGTTTTTGCTCCAAAGCAGTGAAATACCTCTTG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGAGGACTCCATGACCTaGAATTCAAGAGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHEDSMT*NSRGIS
Trigger: TGAAATACCTCTTGAATTGCAGGTCATGGAGTCCTC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCATCATACTGTGTTTTTaGTGTAGAATCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPIILCF*CRICCC
Trigger: ACAACAGCAGATTCTACAGCAAAAACACAGTATGAT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACCTCAAGTGGCATTTTaGCTTCGGATGAATTCAAAA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGPQVAF*LRMNSK
Trigger: TTTTGAATTCATCCGAAGGCAAAATGCCACTTGAGG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACCTCAAGTGGCATTTTaGCTTCGGATGAATTCAAAA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTPQVAF*LRMNSK
Trigger: TTTTGAATTCATCCGAAGGCAAAATGCCACTTGAGG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAGACTTTCGTGTAGATaGTTTATTTCCAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLARLSCR*FISSQG
Trigger: GCCTTGGCTGGAAATAAAGCATCTACACGAAAGTCT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCATTGTCCAAATGCTGTaGCGAATATCCTATATTGTG +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPIVQML*RISYIV
Trigger: CACAATATAGGATATTCGGCACAGCATTTGGACAAT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCAAATTGTCCAAATaGTGTGCCGAATATCCTATA +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCSKLSK*CAEYPI
Trigger: TATAGGATATTCGGCACAGCATTTGGACAATTTGCT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAACTGTAGATGTTGCTaGTGCTGTTGCAGAGAAATC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLANCRCC*CCCREI
Trigger: GATTTCTCTGCAACAGCAGCAGCAACATCTACAGTT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCAAGGCAATCATaGTTTGGTTCCCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDWSRQS*FGSLPV
Trigger: AACGGGCAGGGAACCAAAGCATGATTGCCTTGACCA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTTGACACCAAGGCCTTaGTCTGTTCCAAGCGCTCTA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDLTPRP*SVPSAL
Trigger: TAGAGCGCTTGGAACAGAGCAAGGCCTTGGTGTCAA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACACAAATTTCCATTCCTaGTTCAGTTCTTCGCACCAC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHTNFHS*FSSSHH
Trigger: GTGGTGCGAAGAACTGAAGCAGGAATGGAAATTTGT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCGTCAGTAACAGCTGTTaGTTCTCCACGTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SCCKESSSSFARAWHMDSVSNSC*FSTFSP
Trigger: TGGAGAGAACGTGGAGAAGCAACAGCTGTTACTGAC...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCTATCCAAGCCTCAGTaGTCTTCAGAAGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQLSKPQ*SSEGHY
Trigger: ATAGTGACCTTCTGAAGAGCACTGAGGCTTGGATAG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGCTTATTTTCCCATATaGTTCCTGAACAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSAYFPI*FLNNCS
Trigger: GGAACAATTGTTCAGGAAGCATATGGGAAAATAAGC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCGGCCACCTGGGTCTTaGAGGCATGCAGGACTTCTG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCRPPGS*RHAGLL
Trigger: CAGAAGTCCTGCATGCCTGCAAGACCCAGGTGGCCG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGCCACGTTGGCTTGTTaGAGCCACAGCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSATLAC*SHSSSS
Trigger: CGAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTGTTCAGCAACACTCTaGCCACTGATTTCATTCAAA +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWCSATL*PLISFK
Trigger: TTTGAATGAAATCAGTGGGCAGAGTGTTGCTGAACA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTTCTGTTACTTGTTCTaGCCAAAATGTCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPFCYLF*PKCLSV
Trigger: AACAGAGAGACATTTTGGGCAGAACAAGTAACAGAA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAATTCTTCCCATTTCTaGAACAAACTCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGNSSHF*NKLCSF
Trigger: GAAGCTGCAGAGTTTGTTGCAGAAATGGGAAGAATT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCAATCATTTCTGTGATTaGTTTACGAGACGGCAATTT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPNHFCD*FTRRQF
Trigger: AAATTGCCGTCTCGTAAAGCAATCACAGAAATGATT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTTTCTACATCACAGGTaGTTAGCTGAAGTAATGACT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCFLHHR*LAEVMT
Trigger: AGTCATTACTTCAGCTAAGCACCTGTGATGTAGAAA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATTCTTTCATAGCGCTTaGTTTCTACATCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAFFHSA*FLHHRC
Trigger: GCACCTGTGATGTAGAAAGCAAGCGCTATGAAAGAA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTTCATCTCCCCCAGGTaGTCTGCAAACTCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDFISPR*SANSVL
Trigger: AAGAACGGAGTTTGCAGAGCACCTGGGGGAGATGAA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCAGTCTCTCTTCTTGTaGTTCCAGCCAGTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQQSLFL*FQPVVQ
Trigger: TTGAACAACTGGCTGGAAGCACAAGAAGAGAGACTG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGCCGTTTTCTGCACATCATaGTGCAGCTCCTTTATGTCC +
Preference number: 4 (lower is better)
Translates to: FSSCISSLRHSRRARGSAVFCTS*CSSFMS
Trigger: GGACATAAAGGAGCTGCAGCATGATGTGCAGAAAAC...GGCAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACGAAGTAGTGAAATCTTaGCACTGCCTCACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GFWVPCKAIKSWDTCSRNEVVKS*HCLTSP
Trigger: TGGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTC...GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTGTGCCTTTAAAACTTaGAGCCTGCTTTTCAACTCC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHCAFKT*SLLFNS
Trigger: GGAGTTGAAAAGCAGGCTGCAAGTTTTAAAGGCACA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGACCAGGTGCGAAGGTTaGTCATGTTTTTGTCCAACT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQTRCEG*SCFCPT
Trigger: AGTTGGACAAAAACATGAGCAACCTTCGCACCTGGT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATTCGAGCCAACCAGGTaGGAAGGTTGCTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSFEPTR*EGCSCF
Trigger: AAAACATGAGCAACCTTCGCACCTGGTTGGCTCGAA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGCCAGCCGCCGGTACTaGTTGTTGATGAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCASRRY*LLMSSS
Trigger: GCTGGAGCTCATCAACAAGCAGTACCGGCGGCTGGC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATGCTGGCCGTGTCTGTaGGGTTCTCCCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGCWPCL*GSPGPA
Trigger: GGCTGGCCCGGGAGAACCGCACAGACACGGCCAGCA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATGCTGGCCGTGTCTGTaGGGTTCTCCCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKCWPCL*GSPGPA
Trigger: GGCTGGCCCGGGAGAACCGCACAGACACGGCCAGCA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCCATCTGCTTCAGCCTaGTGGCCGTGTCTGTGCGGT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCPSASA*WPCLCG
Trigger: ACCGCACAGACACGGCCAGCAGGCTGAAGCAGATGG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CATCCGAAATGGATTTACCTGACAGTGCGCTGTAGTATGGGCCCTCCTCGTCCTCTTTGCCACCATCCGTaGCTGGAGGTAATAGTAGCT +
Preference number: 4 (lower is better)
Translates to: HPKWIYLTVRCSMGPPRPLCHHP*LEVIVA
Trigger: AGCTACTATTACCTCCAGGCACGGATGGTGGCAAAG...AGGACGAGGAGGGCCCATACTACAGCGCACTGTCAGGTAAATCCATTTCGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACTTCCTGCTGTGGGTTaGCATTCAGGACTCGCGGGC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLPAVG*HSGLAG
Trigger: GCCCGCGAGTCCTGAATGGCAACCCACAGCAGGAAG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCAGTCTCTTCACTCTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCTCGAAGGCACCTGACTaGTGCTCTGTGATACCGGCC +
Preference number: 4 (lower is better)
Translates to: CSLFTLSSISWISEGGFASKAPD*CSVIPA
Trigger: GGCCGGTATCACAGAGCAGCAGTCAGGTGCCTTCGA...GGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAGAGTGAAGAGACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp TTTGCACAGGCATCGGAGTCGTGCAGTAGGACGTCACAGATGTTAAACACGGACTCGGGGCTCTCGGTTTaGAGAAATTCCTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FAQASESCSRTSQMLNTDSGLSV*RNSLLL
Trigger: GAGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGA...GTCCGTGTTTAACATCTGTGACGTCCTACTGCACGACTCCGATGCCTGTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCAGTCTCTTCACTCTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCCTCACTGCTCTGAACTaGTTTGCTCGGGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CSLFTLSSISWISEGGFALTALN*FARGAG
Trigger: GCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAG...GGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAGAGTGAAGAGACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAGCGCTGTGGCCGTGTaGTGCCGGGGACCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSAVAV*CRGPCS
Trigger: AGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTGGTCTGGGGCCACGTaGTGGGCACCCTTGGCAATC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLWSGAT*WAPLAI
Trigger: GATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACCAGAATTCACAAAGTaGTTGGCTCTTCAGGAAACT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAPEFTK*LALQET
Trigger: AGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTGGAATGTCCTCGCTTaGTTCTATAATATATGTGAT +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWWNVLA*FYNICD
Trigger: ATCACATATATTATAGAAGCAAGCGAGGACATTCCA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCCATGCCCTTTGGAGCTaGTTTCAGAACTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SCCKESSSSFARAWHMDSHALWS*FQNSRR
Trigger: TCTTCTGGAGTTCTGAAAGCAGCTCCAAAGGGCATG...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGCTTGCCTGGCTCTCTaGATCGCGCCTTTTGCTCGC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSACLAL*IAPFAR
Trigger: GCGAGCAAAAGGCGCGATCCAGAGAGCCAGGCAAGC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCTGGTTCCAGCAATCTaGGGATTTTTAATTCTTGTT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSLVPAI*GFLILV
Trigger: AACAAGAATTAAAAATCCCCAGATTGCTGGAACCAG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGTTAGGTGGTACCAATaGCAAGTGATTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGVRWYQ*QVIFIL
Trigger: AAGGATGAAAATCACTTGCCATTGGTACCACCTAAC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACTCCAATTTGTTAGGTaGTACCAATGGCAAGTGATT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGLQFVR*YQWQVI
Trigger: AATCACTTGCCATTGGTACCACCTAACAAATTGGAG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCAGATTTTTGCAGACCTaGTTTATCTTGTCTACAACT +
Preference number: 4 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPRFLQT*FILSTT
Trigger: AGTTGTAGACAAGATAAACCAGGTCTGCAAAAATCT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCAAAGAGTTGTTCAATTaGGCCACAGATTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSKELFN*ATDSNC
Trigger: ACAGTTTGAATCTGTGGCCCAATTGAACAACTCTTT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTCCATGTCAGTCACGTaGTTTGATAAATTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWSMSVT*FDKFSH
Trigger: ATGGGAGAATTTATCAAACCACGTGACTGACATGGA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCCATGTCAGTCACGTaGTTTGATAAATTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSMSVT*FDKFSH
Trigger: ATGGGAGAATTTATCAAACCACGTGACTGACATGGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAACACTATCTCAGCAATaGTTTTCTTCATGGGACGTA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGTLSQQ*FSSWDV
Trigger: TACGTCCCATGAAGAAAACCATTGCTGAGATAGTGT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAGGTCTTCTTTTCTCTaGTTCAAACTCAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGRSSFL*FKLRIC
Trigger: ACAGATTCTGAGTTTGAACCAGAGAAAAGAAGACCT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCAGGTCTTCTTTTCTCTaGTTCAAACTCAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPRSSFL*FKLRIC
Trigger: ACAGATTCTGAGTTTGAACCAGAGAAAAGAAGACCT...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACCTCTTCTGTTTGGTTaGGCCTTAGGGAACATTCTG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSPLLFG*ALGNIL
Trigger: CAGAATGTTCCCTAAGGCCCAACCAAACAGAAGAGG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCCAGCTCGGCCACCTaGGTCTTGCAGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSSSAT*VLQACR
Trigger: CCTGCATGCCTGCAAGACCCAGGTGGCCGAGCTGGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCGCCTTTCAGTTACAATaGATTCCAATTCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPAFQLQ*IPIQKG
Trigger: ACCTTTCTGAATTGGAATCCATTGTAACTGAAAGGC...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGAATACCCATATTTGTaGAAACCTGAGGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAEYPYL*KPEAPQ
Trigger: TTGTGGAGCCTCAGGTTTCCACAAATATGGGTATTC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGGTTACTTGCTTCTTaGCGCAGGTCTTCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSRLLAS*RRSSSW
Trigger: CCAACTTGAAGACCTGCGCCAAGAAGCAAGTAACCT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAACAAAGCATCTTGCTaGCTCTCAGTGACGAAAGGG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSNKASC*LSVTKG
Trigger: CCCTTTCGTCACTGAGAGCCAGCAAGATGCTTTGTT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTACGCCACTTTACTTTTaGTTTGTTTTAAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGTPLYF*FVLSGH
Trigger: ATGGCCACTTAAAACAAACCAAAAGTAAAGTGGCGT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAGCTTCATACCACATTaGCGTGACTTTTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWSFIPH*RDFSSS
Trigger: ACTAGAAGAAAAGTCACGCCAATGTGGTATGAAGCT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATCCAGTTTTGCGATCTaGCCCTCTAATTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSSFAI*PSNSGQ
Trigger: CTGTCCTGAATTAGAGGGCCAGATCGCAAAACTGGA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGTCGATCCAGGACACTaGAATTTTGGAGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQVDPGH*NFGERL
Trigger: AAGCCTTTCTCCAAAATTCCAGTGTCCTGGATCGAC...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCCCGGGAGGAGCATGTaGGTGCTGGACTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRPGRSM*VLDSAG
Trigger: ACCCGCAGAGTCCAGCACCCACATGCTCCTCCCGGG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCCCGGGAGGAGCATGTaGGTGCTGGACTCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEPGRSM*VLDSAG
Trigger: ACCCGCAGAGTCCAGCACCCACATGCTCCTCCCGGG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAGCGCTCCAGTGCCGTaGCCGTGGCCCGAATCCATT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSAPVP*PWPESI
Trigger: AATGGATTCGGGCCACGGCCACGGCACTGGAGCGCT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTTTGCCACCATCCGTGCCTGGAGGTAATAGTAGCTTTCCATAGGGTGGTTTATAGGCTGAAGCGCTCCTaGCCCTTCACTGCAGATAGC +
Preference number: 4 (lower is better)
Translates to: LCHHPCLEVIVAFHRVVYRLKRS*PFTADS
Trigger: GCTATCTGCAGTGAAGGGCCAGGAGCGCTTCAGCCT...ATAAACCACCCTATGGAAAGCTACTATTACCTCCAGGCACGGATGGTGGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGTCTCTACAGTGCTCTaGAACTGCTTAATCATCTCT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAVSTVL*NCLIIS
Trigger: AGAGATGATTAAGCAGTTCCAGAGCACTGTAGAGAC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGAGGTGAGCCGCCGGTaGAACCGGGAGACCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEEVSRR*NRETLP
Trigger: TGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACCTC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACTGAGGAGATGACGGTTCCTCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTCGCCAAGAATCAGTCTaGATTTCTCTGGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TEEMTVPRSLPVYAKNQSRQESV*ISLGSS
Trigger: GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCG...AGACTGATTCTTGGCGTAAACGGGGAGAGAGCGAGGAACCGTCATCTCCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCCCACGTCGCCTGTGTaGTCCCACTCCAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRPTSPV*SHSRGM
Trigger: CATCCCCCTGGAGTGGGACCACACAGGCGACGTGGG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCTCTGAGAGTGGCCATCCGAAATaGATTTACCTGACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: SCWKPFSWRILSSASLSESGHPK*IYLTVR
Trigger: GCGCACTGTCAGGTAAATCCATTTCGGATGGCCACT...CTCAGAGAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACTCAGTTCTATTTCCTaGATATCAGAGGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLALSSIS*ISEGGF
Trigger: AAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCTTTGCTCGGGGAGCTaGCACGGATGTTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCLCSGS*HGCCRR
Trigger: CCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACGTGCTGGGCACCCTTaGCAATCAGGCAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSRAGHP*QSGRWC
Trigger: ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACTCAGATTGGTCTaGGGCCACGTGCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSLRLV*GHVLGT
Trigger: GGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAATTCACAAAGTGCTTaGCTCTTCAGGAAACTGACA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGNSQSA*LFRKLT
Trigger: TGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGAAATTGCCAGCTGATTaGAGTAAAACTGATTCTAAG +
Preference number: 4 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWKLPAD*SKTDSK
Trigger: CTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTT...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAGGCATGTTCTATATTaGTTCTACACTGGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWRHVLY*FYTGRY
Trigger: ATACCTTCCAGTGTAGAATCAATATAGAACATGCCT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAGGCATGTTCTATATTaGTTCTACACTGGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGRHVLY*FYTGRY
Trigger: ATACCTTCCAGTGTAGAATCAATATAGAACATGCCT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCAGATCCCGTTTTATTaGCAGGACATCCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQQIPFY*QDIQKG
Trigger: TCCTTTTTGGATGTCCTGTCAATAAAACGGGATCTG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGGTACCAATGGCAAGTaGTTTTCATCCTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGGTNGK*FSSLFS
Trigger: TGAAAATAAGGATGAAAATCACTTGCCATTGGTACC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCGTTGTGAGAACATGTTaGAAGGACTCCTGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: SCCKESSSSFARAWHMDSVVRTC*KDSWLE
Trigger: TTCAAGCCAGGAGTCCTTTCAACATGTTCTCACAAC...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGTATTAAGAGTCATCTaGAGCTCTCTTTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAVLRVI*SSLSLS
Trigger: GGAAAGAGAAAGAGAGCTTCAGATGACTCTTAATAC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAGTTCAAGACATTCGGTaGCCAAGGCTTTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSVQDIR*PRLWYS
Trigger: AGAATACCAAAGCCTTGGTCACCGAATGTCTTGAAC...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTCAGTGAGGGTCTTCTaGACCAGCGGGGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESVRVF*TSGASL
Trigger: CAGCGAGGCCCCGCTGGTTCAGAAGACCCTCACTGA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATCCAAAGTAACATGGTaGTGTTTTAGTTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASKVTW*CFSSAS
Trigger: GGAAGCTGAACTAAAACATCACCATGTTACTTTGGA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACATGTTTGTTAGCTCCTaGAGATGTGTTGAGATTCCA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHMFVSS*RCVEIP
Trigger: TGGAATCTCAACACATCTTCAGGAGCTAACAAACAT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACATTCTGGATACTTCTaGTGCGCTGAAGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSHSGYF*CAEEVE
Trigger: CTCTACTTCTTCAGCGCATCAGAAGTATCCAGAATG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTTCTTAAGGATGCTTTaGAGCTCCTCAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWFLRML*SSSNCS
Trigger: AGAACAATTTGAGGAGCTTCAAAGCATCCTTAAGAA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGGCCTTATTCAACTGTaGGGTTCTACACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDGLIQL*GSTLCS
Trigger: AGAGCAGAGTGTAGAACCTCACAGTTGAATAAGGCC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATTAGTGAGTCTGGTGTaGGGATTTGTGCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSLVSLV*GFVPWN
Trigger: ATTCCATGGCACAAATCCTCACACCAGACTCACTAA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATTTGATGAGAGTTCATaGTGCAGATATTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGFDESS*CRYCHL
Trigger: TAAGTGGCAATATCTGCATCATGAACTCTCATCAAA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAATTGTATCCAAGTCCTaGGACACATTGAGGGACTGT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSIVSKS*DTLRDC
Trigger: ACAGTCCCTCAATGTGTCTCAGGACTTGGATACAAT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATCTTCATCTGAAGTTTaGTGCTCCACATTGTTCATC +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASSSEV*CSTLFI
Trigger: GATGAACAATGTGGAGCATCAAACTTCAGATGAAGA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCACGTCTCCTCGATTTTCATGCGCCGCTCCATGGACATGGCACAAATGTTCCTATGTTTGCGAGCTGTTaGAACTTTGCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PRLLDFHAPLHGHGTNVPMFASC*NFASCC
Trigger: GCAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACAT...AGGAACATTTGTGCCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATGTTTCCAGACATGCTaGTGTTTGCGAGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSCFQTC*CLRAVE
Trigger: TTCAACAGCTCGCAAACATCAGCATGTCTGGAAACA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATATGTTCAATATCAGGTaGTTGGGCTGTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDMFNIR*LGCQCQ
Trigger: CTGGCACTGACAGCCCAATCACCTGATATTGAACAT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAGTTGTAAGGACTGGGTaGCATAGGAATCAGCAATTG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSVVRTG*HRNQQL
Trigger: CAATTGCTGATTCCTATGTCACCCAGTCCTTACAAC...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGTTCTTTCAAGTTCTaGGTCCAGCTAGCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSSFKF*VQLAKD
Trigger: GTCTTTGGCTAGCTGGACTCAGAACTTGAAAGAACT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACATACAACCCATGTATTaGGTCTGTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHIQPMY*VCLQSP
Trigger: AGGAGATTGAAGACAGACTCAATACATGGGTTGTAT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACAGCTTCTTCACCCTTaGTCCGATGACATCAAAAAG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSQLLHP*SDDIKK
Trigger: CTTTTTGATGTCATCGGATCAAGGGTGAAGAAGCTG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGCTGTGACCCGCCTCTaGAGGTTGTCCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKAVTRL*RLSQRW
Trigger: CCAGCGCTGGGACAACCTTCAGAGGCGGGTCACAGC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACCAAACACAATGAGCTaGTCAATCTTGTTGGTATTT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGPNTMS*SILLVF
Trigger: AAATACCAACAAGATTGATCAGCTCATTGTGTTTGG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAGGGGCTCGCTCTTCTaGATCAGCTGCTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCRGSLF*ISCSPN
Trigger: GTTTGGGGAGCAGCTGATTCAGAAGAGCGAGCCCCT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACAGGGACTGAGGAGATaGCGGTTCCTCGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKQGLRR*RFLALS
Trigger: GGAGAGAGCGAGGAACCGTCATCTCCTCAGTCCCTG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCTGACTGCTGCTCTGTaGTACCGGCCAGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRLTAAL*YRPVPR
Trigger: ACGGGGGACTGGCCGGTATCACAGAGCAGCAGTCAG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAGTCCTGGCACTGCATaGGCGACTGTCGTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSPGTA*ATVVSP
Trigger: GGGGCTTACGACAGTCGCTCATGCAGTGCCAGGACT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATGCCCGGACCACCCTTaGGAGGAAGGAGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKCPDHP*EEGALW
Trigger: CCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTCTTCCTGTTCAGCTTaGAATGAAATATGGAGATCG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSSCSA*NEIWRS
Trigger: CGATCTCCATATTTCATTGCAAGCTGAACAGGAAGA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAACAGATTTGGCTTCTaGCTCCCAGATTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSNRFGF*LPDFHL
Trigger: CAAGTGGAAATCTGGGAGGCAGAAGCCAAATCTGTT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCCTTTGGCAATAAGATaGTTCAAAGATTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPPLAIR*FKDSSI
Trigger: AATGGAAGAATCTTTGAAGCATCTTATTGCCAAAGG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCCTTTGGCAATAAGATaGTTCAAAGATTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGPLAIR*FKDSSI
Trigger: AATGGAAGAATCTTTGAAGCATCTTATTGCCAAAGG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCATATCTTCACTTCTTaGCATAAGCTCATCAAACAT +
Preference number: 4 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGHIFTS*HKLIKH
Trigger: ATGTTTGATGAGCTTATGGCAAGAAGTGAAGATATG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGCTTCTTGAATCTTTaGCTGAAGCCCAGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSFLNL*LKPSCE
Trigger: CTCACAACTGGGCTTCAGGCAAAGATTCAAGAAGCT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTTTTGCTGTAGAATCTaGTGTTGTATCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWFCCRI*CCISSS
Trigger: ACTAGAGGAGATACAACAGCAGATTCTACAGCAAAA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATAGATGCTTCTTCACATaGTTCAGTACGCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDRCFFT*FSTLST
Trigger: GGTGGACAGCGTACTGAAGCATGTGAAGAAGCATCT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAGTTCCTGCAGTTTCTaGAATTTTTCCTCAACCGCT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSSCSF*NFSSTA
Trigger: AGCGGTTGAGGAAAAATTGCAGAAACTGCAGGAACT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATAACGATTCCACAGACTaGTGCCTAGCTAGAATGCCA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDNDSTD*CLARMP
Trigger: TGGCATTCTAGCTAGGCAGCAGTCTGTGGAATCGTT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAACTTGCTCCTGAAATaGTTCACAATTGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWNLLLK*FTIVLF
Trigger: GAAAAGGACAATTGTGAAGCATTTCAGGAGCAAGTT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAAATACTACACATTTCTaGCCAAACTTGCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTNTTHF*PNLLLK
Trigger: TTTCAGGAGCAAGTTTGGGCAGAAATGTGTAGTATT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTTCCTCTGTGGTGGCTaGCTCTTTTGTTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQFLCGG*LFCFGN
Trigger: ATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGTCAGTAACAGCTGTTaGTTCTCCACGTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDVSNSC*FSTFSP
Trigger: TGGAGAGAACGTGGAGAAGCAACAGCTGTTACTGAC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCCTATCCAAGCCTCAGTaGTCTTCAGAAGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: SCCKESSSSFARAWHMDSLSKPQ*SSEGHY
Trigger: ATAGTGACCTTCTGAAGAGCACTGAGGCTTGGATAG...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCGAATGTAAAAGATTGTaGTTCTGTTCTGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPECKRL*FCSESS
Trigger: GGAAGATTCAGAACAGAAGCACAATCTTTTACATTC...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTCCATGTCCTTGTCATaGTTCCAAAGTGAAGACCAA +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSMSLS*FQSEDQ
Trigger: TTGGTCTTCACTTTGGAAGCATGACAAGGACATGGA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCCAGGCCCTGATCTTTaGAAGTCTCTAACAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDPGPDL*KSLTER
Trigger: CCTTTCTGTTAGAGACTTGCAAAGATCAGGGCCTGG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATATTTTGGCAGAGTATaGTTGGATCAACAACATGTC +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGYFGRV*LDQQHV
Trigger: GACATGTTGTTGATCCAAGCATACTCTGCCAAAATA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACTGCTGCTTCAGCCTTaGGGCAGCTTCACCATGAGC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLLLQP*GSFTMS
Trigger: GCTCATGGTGAAGCTGCCGCAAGGCTGAAGCAGCAG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGCTGTTTGAAATCTCCTGTAACATGTCCACTTGAGGTTGACGTTCTACCAGCTCTGCTGCTTCAGCCTTaGGGCAGCTTCACCATGAGC +
Preference number: 4 (lower is better)
Translates to: GCLKSPVTCPLEVDVLPALLLQP*GSFTMS
Trigger: GCTCATGGTGAAGCTGCCGCAAGGCTGAAGCAGCAG...AGCTGGTAGAACGTCAACCTCAAGTGGACATGTTACAGGAGATTTCAAACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAACTGCAGCGCTCCAGTaGCGTGGCCGTGGCCCGAAT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGTAALQ*RGRGPN
Trigger: ATTCGGGCCACGGCCACGGCACTGGAGCGCTGCAGT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACACATCCACTTTGAGTaGTTCTTCTATCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAHIHFE*FFYLLQ
Trigger: TTGGAGAAGATAGAAGAAGCACTCAAAGTGGATGTG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCACATCCACTTTGAGTaGTTCTTCTATCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHHIHFE*FFYLLQ
Trigger: TTGGAGAAGATAGAAGAAGCACTCAAAGTGGATGTG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCACGTCACCCTTCCTCTaGCGAACACCCTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCTSPFL*RTPWTA
Trigger: TGCTGTCCAGGGTGTTCGGCAGAGGAAGGGTGACGT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACTGTTCTGCTTAATCATCTCTaGCAGCTGGGGCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: SGFPARPLNLGTLAPVTVLLNHL*QLGLHV
Trigger: GACATGGAGCCCCAGCTGGCAGAGATGATTAAGCAG...AACAGTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp TCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCACAGTGCTCTGGAACTaGTTAATCATCTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLSPRLRQESVWISLGSSTVLWN*LIISAS
Trigger: GCTGGCAGAGATGATTAAGCAGTTCCAGAGCACTGT...GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAACTGGTCACCCATCTaGTTTAACTGTAACTTGTTT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWNWSPI*FNCNLF
Trigger: AAACAAGTTACAGTTAAAGCAGATGGGTGACCAGTT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCGCTGTAGATCCTGCTaGTCAGCGAGCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCRCRSC*SASLFW
Trigger: CCAGAAGAGGCTCGCTGAGCAGCAGGATCTACAGCG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGGGCTGTCGGGAACATaGCACGAGTGGCCATCCGAA +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLGLSGT*HEWPSE
Trigger: TTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGGGCTGTCGGGAACATaGCACGAGTGGCCATCCGAA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKGLSGT*HEWPSE
Trigger: TTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCTCGCGGGCCTTCTTTaGCACCATCCGTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRLAGLL*HHPCLE
Trigger: CTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAGTCCCCCGTCTTCCTaGTGTGGGTTGCCATTCAGG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSPPSS*CGLPFR
Trigger: CCTGAATGGCAACCCACAGCAGGAAGACGGGGGACT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTTCTTCTCAATAACATaGACCTTTTCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSFFSIT*TFSSAS
Trigger: TGAAGCTGAAGAAAAGGTGCATGTTATTGAGAAGAA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTGGTCTGGGGCCACGTaGTGGGCACCCTTGGCAATC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIWSGAT*WAPLAI
Trigger: GATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAGCCCAGAAGAAGTCTaGACAGGTCCCGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSPEEV*TGPGTL
Trigger: CAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TCGCCTTCTGTAGTTCTCACTGCTCTGAACTGCTTTGCTCGGGGAGCTGGCACGCCAGAATTCACAAAGTaGTTGGCTCTTCAGGAAACT +
Preference number: 4 (lower is better)
Translates to: SPSVVLTALNCFARGAGTPEFTK*LALQET
Trigger: AGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGG...CGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAAGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTGGAATGTCCTCGCTTaGTTCTATAATATATGTGAT +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCWNVLA*FYNICD
Trigger: ATCACATATATTATAGAAGCAAGCGAGGACATTCCA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGCTTGCAATGAAATATaGAGATCGTCGATGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDACNEI*RSSMPQ
Trigger: CTGGGGCATCGACGATCTCCATATTTCATTGCAAGC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTCCCAGGGGCATCTTTaGAATACTGCAGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDSQGHL*NTAETV
Trigger: CACAGTTTCTGCAGTATTCCAAAGATGCCCCTGGGA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCCTCTGCACCCTGTaGTTCATTCCTTCAAATTGT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSLLCTL*FIPSNC
Trigger: ACAATTTGAAGGAATGAACCACAGGGTGCAGAGGAG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCCTCCTCTGCACCCTGTaGTTCATTCCTTCAAATTGT +
Preference number: 4 (lower is better)
Translates to: SCCKESSSSFARAWHMDSLLCTL*FIPSNC
Trigger: ACAATTTGAAGGAATGAACCACAGGGTGCAGAGGAG...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTGTCTCAGTAATGTCTaGTATCTATCCATCAAACAT +
Preference number: 4 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSCLSNV*YLSIKH
Trigger: ATGTTTGATGGATAGATACCAGACATTACTGAGACA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTTCTGTTTGTTCCAGTaGCTTAATGGCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHFCLFQ*LNGCFL
Trigger: AAGAAAGCAGCCATTAAGCCACTGGAACAAACAGAA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATTCTGTTTGTTCCAGTaGCTTAATGGCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAFCLFQ*LNGCFL
Trigger: AAGAAAGCAGCCATTAAGCCACTGGAACAAACAGAA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATAAGGCAATCATGCTTTaGTTCCCTGCCCGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDKAIML*FPARSS
Trigger: AGAAGAACGGGCAGGGAACCAAAGCATGATTGCCTT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCTTAGTTCAGCTTCCGTaGCAGCTGTCTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCLVQLP*QLSPPW
Trigger: CCAGGGTGGAGACAGCTGCCACGGAAGCTGAACTAA...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTACTTGGGTTTGTAATTaGTCAAGTTGTGAAAAATCC +
Preference number: 4 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCTWVCN*SSCEKS
Trigger: GGATTTTTCACAACTTGACCAATTACAAACCCAAGT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAACTGAAGTTGTAGTTTaGCTTCGGGGCTGGATATCA +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSTEVVV*LRGWIS
Trigger: TGATATCCAGCCCCGAAGCCAAACTACAACTTCAGT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACCAGCTCATTTAGTTTaGAATGCCATAGATCTAACT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTPAHLV*NAIDLT
Trigger: AGTTAGATCTATGGCATTCCAAACTAAATGAGCTGG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACATAGTCAGCAGGATTaGCCAGCAAATGACTGGTAT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSHSQQD*PANDWY
Trigger: ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACATTCGCTGAATCTGTaGAAGGCTTTCCATTATTTT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGHSLNL*KAFHYF
Trigger: AAAATAATGGAAAGCCTTCCACAGATTCAGCGAATG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGACGCCACTTTACTTTTaGTTTGTTTTAAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWTPLYF*FVLSGH
Trigger: ATGGCCACTTAAAACAAACCAAAAGTAAAGTGGCGT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAGCTTCATACCACATTaGCGTGACTTTTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASFIPH*RDFSSS
Trigger: ACTAGAAGAAAAGTCACGCCAATGTGGTATGAAGCT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGCCTGTGGAGCTCATaGTCAATTTTCTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSLWSS*SIFLFR
Trigger: CCTGAACAAGAAAATTGACCATGAGCTCCACAGGCT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGGAGCATGTGGGTGCTaGACTCTGCGGGTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKGACGC*TLRVVG
Trigger: TCCCACAACCCGCAGAGTCCAGCACCCACATGCTCC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGGAGCATGTGGGTGCTaGACTCTGCGGGTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLGACGC*TLRVVG
Trigger: TCCCACAACCCGCAGAGTCCAGCACCCACATGCTCC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAATCTTCTCCAAAAGTTaGATCCACTTTTCACAGCAA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGIFSKS*IHFSQQ
Trigger: TTGCTGTGAAAAGTGGATCCAACTTTTGGAGAAGAT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACTCTGCCGAACACCCTaGACAGCATTCTGCCACCGA +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLCRTP*TAFCHR
Trigger: TCGGTGGCAGAATGCTGTCCAGGGTGTTCGGCAGAG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTTATTCTTCAGCTCATaGATCAGACTTCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHLFFSS*IRLLVW
Trigger: CCAAACCAGAAGTCTGATCCATGAGCTGAAGAATAA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGTCTGTCCAGGCTCCTaGTGGTCTGCTGGATCGAGT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCVCPGS*WSAGSS
Trigger: ACTCGATCCAGCAGACCACCAGGAGCCTGGACAGAC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGTCTGTCCAGGCTCCTaGTGGTCTGCTGGATCGAGT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSVCPGS*WSAGSS
Trigger: ACTCGATCCAGCAGACCACCAGGAGCCTGGACAGAC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACGCTGGTTGCCCTCGTaGACCATCTGCTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKRWLPS*TICFSL
Trigger: CAGGCTGAAGCAGATGGTCCACGAGGGCAACCAGCG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGGAACATGCCACGAGTaGCCATCCGAAATGGATTTA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDGTCHE*PSEMDL
Trigger: TAAATCCATTTCGGATGGCCACTCGTGGCATGTTCC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGGTGAGGCTGGGTTCTaGGTTCCCTGCAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCGEAGF*VPCKAI
Trigger: AATGGCCTTGCAGGGAACCCAGAACCCAGCCTCACC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGATGTTGCAGGAGGCTaGTCCCCCGAGTCTACCTCG +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKDVAGG*SPESTS
Trigger: CGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCATCTTTAACATTTCCTCTGGGGCCACGTGCTaGGCACCCTTGGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: LSSISWISEGGFAIFNISSGATC*APLAIR
Trigger: CCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGA...GGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTCACTCAGATTGGTCTaGGGCCACGTGCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSLRLV*GHVLGT
Trigger: GGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCCAGGGAGCCCGTGCTaGGTAAGCCCAGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLPGSPC*VSPEEV
Trigger: GACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CAA 72 bp GTAATTTCCTGTTGGAAGCCATTCAGTTGGCGCATCTaGTCATCGGCGTCACTCTCTGAGAAGTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: VISCWKPFSWRI*SSASLSEKCST
Trigger: CGTGGAGCACTTCTCAGAGAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGAAATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CAA 72 bp TCTGTGGATTCGGGGCTCTCGGTTTGCAGAAATTCCTaGCTGCTCACGTTGACAGAGACCACTAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: SVDSGLSVCRNS*LLTLTETTNAL
Trigger: CAAGGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGAATCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CAA 72 bp TCTACTTTGGAGCTCTGTGGATTCGGGGCTCTCGGTTaGCAGAAATTCCTTGCTGCTCACGTTGACAGAGAC +
Preference number: 4 (lower is better)
Translates to: STLELCGFGALG*QKFLAAHVDRD
Trigger: GTCTCTGTCAACGTGAGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGTGGCGCATTGTTCCTaGGCCCACAAAAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKVAHCS*AHKRRA
Trigger: GGCCCTTCTTTTGTGGGCTCAGGAACAATGCGCCAC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATTTTTCTTCATTGAATaGCTCCATAAAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAFFFIE*LHKGQQ
Trigger: CTGCTGTCCTTTATGGAGTCATTCAATGAAGAAAAA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGTTGTGAGAACATGTTaGAAGGACTCCTGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDVVRTC*KDSWLE
Trigger: TTCAAGCCAGGAGTCCTTTCAACATGTTCTCACAAC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGCCCTCATCATATATaGTTCAAGTTCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSPHHI*FKFLLG
Trigger: TCCCAGAAGGAACTTGAATCATATATGATGAGGGCT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACAGCAGTGCTGCCACTaGGTGCATGGCAGTTGGATT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSQQCCH*VHGSWI
Trigger: AATCCAACTGCCATGCACTCAGTGGCAGCACTGCTG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTTCCATTTCTCTTCTTaGTTAGTCAACCACTTCCTC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQFHFSS*LVNHFL
Trigger: GAGGAAGTGGTTGACTAATCAAGAAGAGAAATGGAA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGCCATTTCCACAGCTaGATCCTTGTTTATTTCCCA +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSHFHS*ILVYFP
Trigger: TGGGAAATAAACAAGGATTCAGCTGTGGAAATGGCT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACAAAGTAATAAGTGCCTaGAGCAAATTGTCCAAATGC +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHKVISA*SKLSKC
Trigger: GCATTTGGACAATTTGCTTCAGGCACTTATTACTTT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCTGGCTTCGAGGGAAGTaGTGCTCTCCACTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCWLRGK*CSPLPW
Trigger: CCAGGGCAGTGGAGAGCATCACTTCCCTCGAAGCCA...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGAGCCGACACAATCTTaGGCAAACATATGCCATCAT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDEPTQS*ANICHH
Trigger: ATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAATACTTCTGATGCGCTaGAGAAGTAGAGTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSILLMR*RSRVSN
Trigger: GTTACTGACTCTACTTCTTCAGCGCATCAGAAGTAT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCATACTTCTGATGCGCTaGAGAAGTAGAGTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: SCCKESSSSFARAWHMDSILLMR*RSRVSN
Trigger: GTTACTGACTCTACTTCTTCAGCGCATCAGAAGTAT...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCATTCTGGATACTTCTaGTGCGCTGAAGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDHSGYF*CAEEVE
Trigger: CTCTACTTCTTCAGCGCATCAGAAGTATCCAGAATG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTTCTTAAGGATGCTTTaGAGCTCCTCAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHFLRML*SSSNCS
Trigger: AGAACAATTTGAGGAGCTTCAAAGCATCCTTAAGAA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATGTTCAACAATGTCCTaGACTTCAGAATCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSCSTMS*TSESSS
Trigger: TGAGCTGGATTCTGAAGTTCAGGACATTGTTGAACA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTTAGTGAGTCTGGTGTaGGGATTTGTGCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDLVSLV*GFVPWN
Trigger: ATTCCATGGCACAAATCCTCACACCAGACTCACTAA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGATATTTTCCTGTGTCTaGAGGTTACTTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQIFSCV*RLLASW
Trigger: CCAAGAAGCAAGTAACCTTCAGACACAGGAAAATAT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGCTCCAGGCAGACTTaGAGGTTGTCAAAACATTCA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDCSRQT*RLSKHS
Trigger: TGAATGTTTTGACAACCTTCAAGTCTGCCTGGAGCA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACAACACTCTGCCCACTaGTTTCATTCAAAGACTGTT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSQHSAH*FHSKTV
Trigger: AACAGTCTTTGAATGAAATCAGTGGGCAGAGTGTTG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGTTTTAAGTGGCCATaGGCAAGCTTTTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDCFKWP*ASFSFP
Trigger: TGGGAAGGAAAAGCTTGCTCATGGCCACTTAAAACA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCTGGAAGTTGAGTTATaGGCATTGTCCATTTTTGTT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHLEVEL*ALSIFV
Trigger: AACAAAAATGGACAATGCTCATAACTCAACTTCCAG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCCGATCCGTCAGCTTTaGGAATTCTGTAATAAATTC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQPIRQL*EFCNKF
Trigger: GAATTTATTACAGAATTCTCAAAGCTGACGGATCGG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGATACAACCCATGTATTaGGTCTGTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQIQPMY*VCLQSP
Trigger: AGGAGATTGAAGACAGACTCAATACATGGGTTGTAT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTGCCGTCCTCTCAGCTaGCTTGAGCCAGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCCRPLS*LEPVLK
Trigger: TTTGAGGACTGGCTCAAGTCAGCTGAGAGGACGGCA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCTGTCGAAGGCACCTaGCTGCTGCTCTGTGATACC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSVEGT*LLLCDT
Trigger: GGTATCACAGAGCAGCAGTCAGGTGCCTTCGACAGA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTAGTCCTGGCACTGCATaGGCGACTGTCGTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKISPGTA*ATVVSP
Trigger: GGGGCTTACGACAGTCGCTCATGCAGTGCCAGGACT...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGGTCGGCGCCCCGCTTaGCTGGCTCTCTGGATCGCG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNGRRPA*LALWIA
Trigger: CGCGATCCAGAGAGCCAGGCAAGCGGGGCGCCGACC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGATTTGCCATCTTGCTTaGACTTTAGAGCATTTCTTA +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWICHLA*TLEHFL
Trigger: TAAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAAT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAGACATTTGCCATCTTaGTTGCACTTTAGAGCATTT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLARHLPS*LHFRAF
Trigger: AAATGCTCTAAAGTGCAAGCAAGATGGCAAATGTCT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCCTCGTTTTTCGACGTaGCTCCCGCTGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSPRFST*LPLWAA
Trigger: TGCAGCCCACAGCGGGAGGCACGTCGAAAAACGAGG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGATCATACTGTGTTTTTaGTGTAGAATCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWIILCF*CRICCC
Trigger: ACAACAGCAGATTCTACAGCAAAAACACAGTATGAT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGACTTTCGTGTAGATaGTTTATTTCCAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSRLSCR*FISSQG
Trigger: GCCTTGGCTGGAAATAAAGCATCTACACGAAAGTCT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATTGTCCAAATGCTGTaGCGAATATCCTATATTGTG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAIVQML*RISYIV
Trigger: CACAATATAGGATATTCGGCACAGCATTTGGACAAT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTTCAAAGTAATAAGTaGCTGAAGCAAATTGTCCAA +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTLQSNK*LKQIVQ
Trigger: TTGGACAATTTGCTTCAGGCACTTATTACTTTGAAG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCAACTGTAGATGTTGCTaGTGCTGTTGCAGAGAAATC +
Preference number: 4 (lower is better)
Translates to: SCCKESSSSFARAWHMDSNCRCC*CCCREI
Trigger: GATTTCTCTGCAACAGCAGCAGCAACATCTACAGTT...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACAATTCCTTCTGAGATaGCTCCAAAGTAACATGGTG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSQFLLR*LQSNMV
Trigger: CACCATGTTACTTTGGAGGCATCTCAGAAGGAATTG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCTATCCAAGCCTCAGTaGTCTTCAGAAGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDLSKPQ*SSEGHY
Trigger: ATAGTGACCTTCTGAAGAGCACTGAGGCTTGGATAG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGGCTCCAAACCTCCTTaGGCGTCAGAAGAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSGSKPP*ASEESR
Trigger: TCTGGACTCTTCTGACGCGCAAGGAGGTTTGGAGCC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGCCACGTTGGCTTGTTaGAGCCACAGCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEATLAC*SHSSSS
Trigger: CGAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGCTTCTACAGACAGCTaGAGCCTGAGTGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCASTDS*SLSVLQ
Trigger: CTGGAGCACACTCAGGCTGCAGCTGTCTGTAGAAGC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCGCTTCTTTTGTTTTCTaGACATCATGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLSPRLRQESVWISLGSSASFVF*TSCCSS
Trigger: GGAGCTGCAGCATGATGTGCAGAAAACAAAAGAAGC...GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGGAGGAGCATGTGGGTaGTGGACTCTGCGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRGGACG*WTLRVV
Trigger: CACAACCCGCAGAGTCCAGCACCCACATGCTCCTCC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACCCTGGACAGCATTCTaGCACCGATCCGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSPWTAF*HRSVSF
Trigger: AAAGCTGACGGATCGGTGGCAGAATGCTGTCCAGGG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACAACTGGTCACCCATCTaGTTTAACTGTAACTTGTTT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHNWSPI*FNCNLF
Trigger: AAACAAGTTACAGTTAAAGCAGATGGGTGACCAGTT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTTTGCCACCATCCGTGCCTGGAGGTAATAGTAGCTTTCCATAGGGTGGTTTATCACGGACTCCACCCCTaGGCTGTGTTGTTCAATATC +
Preference number: 4 (lower is better)
Translates to: LCHHPCLEVIVAFHRVVYHGLHP*AVLFNI
Trigger: GATATTGAACAACACAGCGCAGGGGTGGAGTCCGTG...ATAAACCACCCTATGGAAAGCTACTATTACCTCCAGGCACGGATGGTGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAGGCTCCTGGTGGTCTaGTGGATCGAGTCACACTCG +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKRLLVV*WIESHS
Trigger: CGAGTGTGACTCGATCCAGCAGACCACCAGGAGCCT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTGTCCCAGCGCTGGTTaGCCTCGTGGACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSCPSAG*PRGPSA
Trigger: AGCAGATGGTCCACGAGGGCAACCAGCGCTGGGACA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACTCGCGGGCCTTCTTTaGCACCATCCGTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKLAGLL*HHPCLE
Trigger: CTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCTTCCTGCTGTGGGTTaGCATTCAGGACTCGCGGGC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELPAVG*HSGLAG
Trigger: GCCCGCGAGTCCTGAATGGCAACCCACAGCAGGAAG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGCTTTCAGTATCTCCTaGAGTCTCTTCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDAFSIS*SLFTLS
Trigger: ACTGAGAGTGAAGAGACTGCAGGAGATACTGAAAGC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGAGAGCCCGGGGGTCTaGCTTTGGATCGGTGACATG +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSESPGV*LWIGDM
Trigger: CATGTCACCGATCCAAAGGCAGACCCCCGGGCTCTC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATTCTTCTCAATAACATaGACCTTTTCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGFFSIT*TFSSAS
Trigger: TGAAGCTGAAGAAAAGGTGCATGTTATTGAGAAGAA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAGCTGGCACGGATGTTaGAGGAGGCTGGTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGSWHGC*RRLVPR
Trigger: TCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAAGCTGGCACGGATGTTaGAGGAGGCTGGTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSWHGC*RRLVPR
Trigger: TCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCATTCTGTAGTTCTCACTaGTCTGAACTGCTTTGCTCG +
Preference number: 4 (lower is better)
Translates to: RSLPVYAKNQSGFLWGLPFCSSH*SELLCS
Trigger: CGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAA...TGGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAGCCCAGAAGAAGTCTaGACAGGTCCCGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSPEEV*TGPGTL
Trigger: CAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCATCTTTAACATTTCCAATACCCGGGGCACCTaGCACACAGGTTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LSSISWISEGGFAIFNISNTRGT*HTGSLL
Trigger: GAGCAGGGAACCTGTGTGGCAGGTGCCCCGGGTATT...GGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CACCTTCCATTTGCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATTGTGATGGACACCACTaGTCATTGACCATACCTACA +
Preference number: 4 (lower is better)
Translates to: HLPFACSDARDRKGCREHCDGHH*SLTIPT
Trigger: TGTAGGTATGGTCAATGAGCAGTGGTGTCCATCACA...ATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGCAAATGGAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp TCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCTGTGATGGACACCACTaGTCATTGACCATACCTACA +
Preference number: 4 (lower is better)
Translates to: SLSPRLRQESVWISLGSSCDGHH*SLTIPT
Trigger: TGTAGGTATGGTCAATGAGCAGTGGTGTCCATCACA...GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGCTTGCCTGGCTCTCTaGATCGCGCCTTTTGCTCGC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRACLAL*IAPFAR
Trigger: GCGAGCAAAAGGCGCGATCCAGAGAGCCAGGCAAGC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATTTACCACATTGATCTaGACTTTCTCTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTFTTLI*TFSLAS
Trigger: AGAAGCTAAAGAGAAAGTCCAGATCAATGTGGTAAA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATTGTTGTTTTGCAGGTaGTGTTCAAGAATATCTCTG +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLALLFCR*CSRISL
Trigger: CAGAGATATTCTTGAACACCACCTGCAAAACAACAA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCCCGATCTGGGTCTTaGCTTGGTCGAGATCCTCCC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSRSGS*LGRDPP
Trigger: GGGAGGATCTCGACCAAGCCAAGACCCAGATCGGGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTCCTTTGCTCGAGCCTaGCATATGGACTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDSFARA*HMDSIF
Trigger: AAAAATGGAGTCCATATGCCAGGCTCGAGCAAAGGA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATCTGTGACGCAAACCTaGTATGAATCATGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSVTQT*YESCSR
Trigger: TCGAGAACATGATTCATACCAGGTTTGCGTCACAGA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCCATGCTTGGTAGCCTaGAGGTCAGTGGTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCPCLVA*RSVVKA
Trigger: TGCCTTGACCACTGACCTCCAGGCTACCAAGCATGG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCCAGCTCATTTAGTTTaGAATGCCATAGATCTAACT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHPAHLV*NAIDLT
Trigger: AGTTAGATCTATGGCATTCCAAACTAAATGAGCTGG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACATTCGCTGAATCTGTaGAAGGCTTTCCATTATTTT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAHSLNL*KAFHYF
Trigger: AAAATAATGGAAAGCCTTCCACAGATTCAGCGAATG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATCATGTTGGCAATACTaGGGCCACATTTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSCWQY*GHIFLA
Trigger: TGCTAAGAAAATGTGGCCCCAGTATTGCCAACATGA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAAGAAGGAAGTATTTTaGCAGAGTATGCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAKKEVF*QSMLGS
Trigger: TGATCCAAGCATACTCTGCCAAAATACTTCCTTCTT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAGCTTCATACCACATTaGCGTGACTTTTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSFIPH*RDFSSS
Trigger: ACTAGAAGAAAAGTCACGCCAATGTGGTATGAAGCT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAAGATTCCAACCACTTaGTTAACTGATCCGAATCTC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQKIPTT*LTDPNL
Trigger: GAGATTCGGATCAGTTAACCAAGTGGTTGGAATCTT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTGTACACGGTGCCACTaGCGGTTCATCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPECTRCH*RFISPR
Trigger: CCTGGGGGAGATGAACCGCCAGTGGCACCGTGTACA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGTCGATCCAGGACACTaGAATTTTGGAGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDVDPGH*NFGERL
Trigger: AAGCCTTTCTCCAAAATTCCAGTGTCCTGGATCGAC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAAGCGCTCCAGTGCCGTaGCCGTGGCCCGAATCCATT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSAPVP*PWPESI
Trigger: AATGGATTCGGGCCACGGCCACGGCACTGGAGCGCT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGAATCAGCAATTGTCTaGTTTATAGAAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGESAIV*FIETSA
Trigger: AGCTGAAGTTTCTATAAACCAGACAATTGCTGATTC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAGGCTGAAGCGCTCCTaGCCCTTCACTGCAGATAGC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLRLKRS*PFTADS
Trigger: GCTATCTGCAGTGAAGGGCCAGGAGCGCTTCAGCCT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAATTTTCTTTTCACACTaGTCCCAGGTCTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSIFFSH*SQVSTV
Trigger: CACTGTAGAGACCTGGGACCAGTGTGAAAAGAAAAT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACTCCTGGTGGTCTGCTaGATCGAGTCACACTCGGTC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKLLVVC*IESHSV
Trigger: GACCGAGTGTGACTCGATCCAGCAGACCACCAGGAG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGTCTGTCCAGGCTCCTaGTGGTCTGCTGGATCGAGT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKVCPGS*WSAGSS
Trigger: ACTCGATCCAGCAGACCACCAGGAGCCTGGACAGAC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAATGTAATTTCCTGTTaGAAGCCATTCAGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSNVISC*KPFSWR
Trigger: GCGCCAACTGAATGGCTTCCAACAGGAAATTACATT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACAGTGCGCTGTAGTATaGGCCCTCCTCGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKQCAVV*ALLVLF
Trigger: GAAGAGGACGAGGAGGGCCCATACTACAGCGCACTG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTGGCGGAGTCTACTTTaGAGCTCTGTGGATTCGGGG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCWRSLL*SSVDSG
Trigger: CCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACAGAGCAGGCTCAGCTaGCGGAGTCTACTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKQSRLS*RSLLWS
Trigger: GCTCCAAAGTAGACTCCGCCAGCTGAGCCTGCTCTG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGGTGAGGCTGGGTTCTaGGTTCCCTGCAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKGEAGF*VPCKAI
Trigger: AATGGCCTTGCAGGGAACCCAGAACCCAGCCTCACC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCTTTGCTCGGGGAGCTaGCACGGATGTTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRLCSGS*HGCCRR
Trigger: CCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGCTATGCCCTCTATGTaGGGGGTGGCCCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKAMPSM*GVAHWC
Trigger: ACACCAATGGGCCACCCCCCACATAGAGGGCATAGC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGGTGGTGTAGCACTGTaGCCAGCTATGCCCTCTATG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCGGVAL*PAMPSM
Trigger: CATAGAGGGCATAGCTGGCCACAGTGCTACACCACC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCGTGCTGGGCACCCTTaGCAATCAGGCAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPERAGHP*QSGRWC
Trigger: ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCTGGGGCCACGTGCTaGGCACCCTTGGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSGATC*APLAIR
Trigger: CCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTCACTCAGATTGGTCTaGGGCCACGTGCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESLRLV*GHVLGT
Trigger: GGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCCAGGGAGCCCGTGCTaGGTAAGCCCAGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRPGSPC*VSPEEV
Trigger: GACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAAATTGCCAGCTGATTaGAGTAAAACTGATTCTAAG +
Preference number: 4 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGKLPAD*SKTDSK
Trigger: CTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CAA 72 bp GCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTaGAGAGTATCTTCACTCCTCTGCACCCTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: AVLRDAKKSSRA*RVSSLLCTLWF
Trigger: GAACCACAGGGTGCAGAGGAGTGAAGATACTCTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAGAGTTCCTCTGTGGTGGCTGCCTCTTTTGTTTTGGAAATTTCAGGGAGTTCGTGCCTGGCCAACTGTaGGTTTATCCAGCACGTGAA +
Preference number: 4 (lower is better)
Translates to: REFLCGGCLFCFGNFREFVPGQL*VYPARE
Trigger: TTCACGTGCTGGATAAACTCACAGTTGGCCAGGCAC...GAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCATGCATTAATCTGGTaGTCGAGGCCATCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCHALIW*SRPSQA
Trigger: AGCCTGGGATGGCCTCGATCACCAGATTAATGCATG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGAGCCAAGCTTCAGTTTaGTGGAGGGGTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESQASV*WRGGGK
Trigger: CTTGCCCCCACCCCTCCATCAAACTGAAGCTTGGCT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATAGCCAAGCTTCAGTTTaGTGGAGGGGTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYSQASV*WRGGGK
Trigger: CTTGCCCCCACCCCTCCATCAAACTGAAGCTTGGCT...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTCAGCAGTGCTGCCACTaGGTGCATGGCAGTTGGATT +
Preference number: 4 (lower is better)
Translates to: RMLLRQHSISCLADASLFQQCCH*VHGSWI
Trigger: AATCCAACTGCCATGCACTCAGTGGCAGCACTGCTG...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGTCTAATTCGAATTCCTaGCCCACGAGCCAACTGATA +
Preference number: 4 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKESNSNS*PTSQLI
Trigger: TATCAGTTGGCTCGTGGGTCAGGAATTCGAATTAGA...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGAATCCTGCAGTTGTTaGAGAAGACTTTCGTGTAGA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDESCSC*RRLSCR
Trigger: TCTACACGAAAGTCTTCTTCAACAACTGCAGGATTC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGTCCTCAACCGCTATTTaGTCCACAGGCTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKESSTAI*STGLSE
Trigger: TTCTGATAAGCCTGTGGATCAAATAGCGGTTGAGGA...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATGCCATCTTGTAAACTaGGTCTATTCTCTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSCHLVN*VYSLVP
Trigger: AGGAACTAGAGAATAGACTCAGTTTACAAGATGGCA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCTTCCCAGTTTCTCAGTaGGGTCCTGGATGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCFPVSQ*GPGCVL
Trigger: TAGCACACATCCAGGACCTCACTGAGAAACTGGGAA...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGTTCAACAATGTCCTaGACTTCAGAATCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDCSTMS*TSESSS
Trigger: TGAGCTGGATTCTGAAGTTCAGGACATTGTTGAACA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACACTCCACCTTCCTCTaGTGTTACAGCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKHSTFL*CYSWQP
Trigger: AGGCTGCCAGCTGTAACATCAGAGGAAGGTGGAGTG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGCTTCAGCCTCATGTTaGGTGGCTCCATTATCTCCC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSASASC*VAPLSP
Trigger: GGGAGATAATGGAGCCACTCAACATGAGGCTGAAGC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCATTTTGGCCCTGGGGTaGCAAGATCGAGTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCILALG*QDRVWN
Trigger: GTTCCAGACTCGATCTTGTCACCCCAGGGCCAAAAT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAATATTTTCCTGTGTCTaGAGGTTACTTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSIFSCV*RLLASW
Trigger: CCAAGAAGCAAGTAACCTTCAGACACAGGAAAATAT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAACACTGCTGAGGCACTaGCTGAGGGTCAGGAATAGT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSTLLRH*LRVRNS
Trigger: ACTATTCCTGACCCTCAGTCAGTGCCTCAGCAGTGT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCTTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGTCTTTTTCCTGTTGGTaGAGTCTATCCAAATTCTCT +
Preference number: 4 (lower is better)
Translates to: PFPVALVPSDTLGEPGGLSFSCW*SLSKFS
Trigger: AGAGAATTTGGATAGACTTCACCAACAGGAAAAAGA...CAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp TGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATGAGAAGGTGGTTTGGTAGAGGCTaGAGCGCTCCTGGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: CTFSSASIQSSPCPLMRRWFGRG*SAPGPS
Trigger: TGAAGGGCCAGGAGCGCTTCAGCCTCTACCAAACCA...CCTTCTCATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTGCCGTCCTCTCAGCTaGCTTGAGCCAGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLCRPLS*LEPVLK
Trigger: TTTGAGGACTGGCTCAAGTCAGCTGAGAGGACGGCA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAGGGGCTCGCTCTTCTaGATCAGCTGCTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSRGSLF*ISCSPN
Trigger: GTTTGGGGAGCAGCTGATTCAGAAGAGCGAGCCCCT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACAGGGACTGAGGAGATaGCGGTTCCTCGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPQGLRR*RFLALS
Trigger: GGAGAGAGCGAGGAACCGTCATCTCCTCAGTCCCTG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GTAATTTCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCCGAAATGGATTTACCTaGCAGTGCGCTGTAGTATGG +
Preference number: 4 (lower is better)
Translates to: VISCWKPFSWRILSSASLRNGFT*QCAVVW
Trigger: CCATACTACAGCGCACTGTCAGGTAAATCCATTTCG...GAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGAAATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CACCTTCCATTTGCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATAGCAGAGCTAGGTACTaGACAGAACATTTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: HLPFACSDARDRKGCREHSRARY*TEHFGV
Trigger: TACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCT...ATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGCAAATGGAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGGTCCCAAGGCCAAGTaGCGGTTCGCTGTATGCCAC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPGPKAK*RFAVCH
Trigger: GTGGCATACAGCGAACCGTCACTTGGCCTTGGGACC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACATTTGCCATCTTGCTTaGACTTTAGAGCATTTCTTA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHICHLA*TLEHFL
Trigger: TAAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAAT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTCTTTGTTGGATCTATaGTTCACACTCTTCATGTCA +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSLLDL*FTLFMS
Trigger: TGACATGAAGAGTGTGAAGCATAGATCCAACAAAGA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTCCTCGTTTTTCGACGTaGCTCCCGCTGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSHASVRCPPALFYCFFLPRFST*LPLWAA
Trigger: TGCAGCCCACAGCGGGAGGCACGTCGAAAAACGAGG...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCTGAATTTGTTGTTTTaGAGGTGGTGTTCAAGAATA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHLNLLF*RWCSRI
Trigger: TATTCTTGAACACCACCTGCAAAACAACAAATTCAG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCCTTTAATACAAAGTTaGCTGGCTCTTCTAAGCGGT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDPLIQS*LALLSG
Trigger: ACCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCATACTGTGTTTTTaGTGTAGAATCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAIILCF*CRICCC
Trigger: ACAACAGCAGATTCTACAGCAAAAACACAGTATGAT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCAGTCTCAGTAGCTGCTaGAAGGAGTCTTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCSLSSC*KESSSS
Trigger: GGAGCTTGAAGACTCCTTGCAGCAGCTACTGAGACT...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAACTTGCTCCTGAAATaGTTCACAATTGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQNLLLK*FTIVLF
Trigger: GAAAAGGACAATTGTGAAGCATTTCAGGAGCAAGTT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAGCCAACTGATAAGCTCCTTCACATGTGCTTTGGGCAGATGCTTCTTCACATGTTGACACCAAGGCCTTaGTCTGTTCCAAGCGCTCTA +
Preference number: 4 (lower is better)
Translates to: EPTDKLLHMCFGQMLLHMLTPRP*SVPSAL
Trigger: TAGAGCGCTTGGAACAGAGCAAGGCCTTGGTGTCAA...CATGTGAAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTTATCAGTTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTTCTAAAGCTTTTCTaGATTCTTCCACCTGGGATT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSLLKLF*ILPPGI
Trigger: AATCCCAGGTGGAAGAATGCAGAAAAGCTTTAGAAG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACTCTTCCTCGACTGCTaGCAGGTAAGACATGGAGCC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKLFLDC*QVRHGA
Trigger: GGCTCCATGTCTTACCTGGCAGCAGTCGAGGAAGAG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATGGAATTATCAGAGGTaGTTATTTTCCCATATGCTT +
Preference number: 4 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAWNYQR*LFSHML
Trigger: AAGCATATGGGAAAATAAGCACCTCTGATAATTCCA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGCCACGTTGGCTTGTTaGAGCCACAGCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPATLAC*SHSSSS
Trigger: CGAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGCTTCTACAGACAGCTaGAGCCTGAGTGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKASTDS*SLSVLQ
Trigger: CTGGAGCACACTCAGGCTGCAGCTGTCTGTAGAAGC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACAATCATTTCTGTGATTaGTTTACGAGACGGCAATTT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHNHFCD*FTRRQF
Trigger: AAATTGCCGTCTCGTAAAGCAATCACAGAAATGATT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCTGCTGCTTCAGCCTTaGGGCAGCTTCACCATGAGC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELLLQP*GSFTMS
Trigger: GCTCATGGTGAAGCTGCCGCAAGGCTGAAGCAGCAG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTACGTCACCCTTCCTCTaGCGAACACCCTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSTSPFL*RTPWTA
Trigger: TGCTGTCCAGGGTGTTCGGCAGAGGAAGGGTGACGT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACTGCTTAATCATCTCTaGCAGCTGGGGCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLLNHL*QLGLHV
Trigger: GACATGGAGCCCCAGCTGGCAGAGATGATTAAGCAG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCTGCTTAATCATCTCTaGCAGCTGGGGCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCLLNHL*QLGLHV
Trigger: GACATGGAGCCCCAGCTGGCAGAGATGATTAAGCAG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAACACTCGGTCTCATTTaGACAGGCATCGGAGTCGTG +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSTLGLI*TGIGVV
Trigger: CACGACTCCGATGCCTGTGCAAATGAGACCGAGTGT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCGTCTAAAAACTTCTaGCACAGGCGCCACGTCTCC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSSKNF*HRRHVS
Trigger: GGAGACGTGGCGCCTGTGGCAGAAGTTTTTAGACGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACCATCTGCTTCAGCCTaGTGGCCGTGTCTGTGCGGT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGPSASA*WPCLCG
Trigger: ACCGCACAGACACGGCCAGCAGGCTGAAGCAGATGG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATGTCCCAGCGCTGGTTaGCCTCGTGGACCATCTGCT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPCPSAG*PRGPSA
Trigger: AGCAGATGGTCCACGAGGGCAACCAGCGCTGGGACA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCCACGTTGGTCAGCTaGAGGTCCATCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSTLVS*RSISVS
Trigger: GCTCACAGAGATGGACCTGCAGCTGACCAACGTGGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGGGCTGTCGGGAACATaGCACGAGTGGCCATCCGAA +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPGLSGT*HEWPSE
Trigger: TTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTCGAAGGCACCTGACTaGTGCTCTGTGATACCGGCC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKISKAPD*CSVIPA
Trigger: GGCCGGTATCACAGAGCAGCAGTCAGGTGCCTTCGA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCGGGGCTCTCGGTTTaGAGAAATTCCTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSGLSV*RNSLLL
Trigger: GAGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATGGAAGTCCTGGCACTaGATGAGCGACTGTCGTAAG +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSWKSWH*MSDCRK
Trigger: CTTACGACAGTCGCTCATGCAGTGCCAGGACTTCCA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGAGCCCGGGGGTCTaGCTTTGGATCGGTGACATG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPESPGV*LWIGDM
Trigger: CATGTCACCGATCCAAAGGCAGACCCCCGGGCTCTC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTTCTTCTCAATAACATaGACCTTTTCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHFFSIT*TFSSAS
Trigger: TGAAGCTGAAGAAAAGGTGCATGTTATTGAGAAGAA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCTCACTGCTCTGAACTaGTTTGCTCGGGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSLTALN*FARGAG
Trigger: GCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000458046.6
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTAGCCCAGAAGAAGTCTaGACAGGTCCCGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSPEEV*TGPGTL
Trigger: CAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTGGAATGTCCTCGCTTaGTTCTATAATATATGTGAT +
Preference number: 4 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHWNVLA*FYNICD
Trigger: ATCACATATATTATAGAAGCAAGCGAGGACATTCCA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGGCGCCCCGCTTGCCTaGCTCTCTGGATCGCGCCTT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNGAPLA*LSGSRL
Trigger: AAGGCGCGATCCAGAGAGCCAGGCAAGCGGGGCGCC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCGCCAAGGATAATGGATaGGTTTCCATCAATGATATC +
Preference number: 4 (lower is better)
Translates to: SCCKESSSSFARAWHMDSAKDNG*VSINDI
Trigger: GATATCATTGATGGAAACCCATCCATTATCCTTGGC...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAATCTGGGTCTTGGCTTaGTCGAGATCCTCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSIWVLA*SRSSLS
Trigger: GCTAAGGGAGGATCTCGACCAAGCCAAGACCCAGAT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTCCCGATCTGGGTCTTaGCTTGGTCGAGATCCTCCC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESRSGS*LGRDPP
Trigger: GGGAGGATCTCGACCAAGCCAAGACCCAGATCGGGA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATTTCTAGCTAAAGCTTaGCAGAACAGCTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSFLAKA*QNSSVF
Trigger: GAAAACTGAGCTGTTCTGCCAAGCTTTAGCTAGAAA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGAGCTCTGGTCCTCTGTaGGTAGTAACTTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKESSGPL*VVTYPL
Trigger: AAGAGGATAAGTTACTACCCACAGAGGACCAGAGCT...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACCTGCACATCAGAAGTaGCCTGCTTCTCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKPAHQK*PASLCL
Trigger: CAGGCAGAGAGAAGCAGGCCACTTCTGATGTGCAGG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCCTGCACATCAGAAGTaGCCTGCTTCTCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLPAHQK*PASLCL
Trigger: CAGGCAGAGAGAAGCAGGCCACTTCTGATGTGCAGG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACCCTGCACATCAGAAGTaGCCTGCTTCTCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHPAHQK*PASLCL
Trigger: CAGGCAGAGAGAAGCAGGCCACTTCTGATGTGCAGG...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGCATAGTCAGCAGGATTaGCCAGCAAATGACTGGTAT +
Preference number: 4 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKEHSQQD*PANDWY
Trigger: ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATG...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACGTCATTTTCAGGGCTaGATGCCTGGTTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSRHFQG*MPGCLQ
Trigger: CTGCAAGCAACCAGGCATCCAGCCCTGAAAATGACG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATGTACACGGTGCCACTaGCGGTTCATCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKCTRCH*RFISPR
Trigger: CCTGGGGGAGATGAACCGCCAGTGGCACCGTGTACA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATGTACACGGTGCCACTaGCGGTTCATCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGCTRCH*RFISPR
Trigger: CCTGGGGGAGATGAACCGCCAGTGGCACCGTGTACA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGCAACTGGTCTGCAATaGCTTGGTTCACCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCATGLQ*LGSPES
Trigger: GGACTCAGGTGAACCAAGCCATTGCAGACCAGTTGC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAGCTGGAGCAGACTCTaGGCCTTCTGCAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSWSRL*AFCNWS
Trigger: AGACCAGTTGCAGAAGGCCCAGAGTCTGCTCCAGCT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGGACTCTGCGGGTTGTaGGAGTCGATCCAGGACACT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSGLCGL*ESIQDT
Trigger: AGTGTCCTGGATCGACTCCCACAACCCGCAGAGTCC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGGAGCATGTGGGTGCTaGACTCTGCGGGTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPGACGC*TLRVVG
Trigger: TCCCACAACCCGCAGAGTCCAGCACCCACATGCTCC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGGAGCATGTGGGTGCTaGACTCTGCGGGTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGGACGC*TLRVVG
Trigger: TCCCACAACCCGCAGAGTCCAGCACCCACATGCTCC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGCTGGCGGAGTCTACTTTGGAGCTCTGTGGATTCGGGGCTCTCGGTTTGCAGAATCTTCTCCAAAAGTTaGATCCACTTTTCACAGCAA +
Preference number: 4 (lower is better)
Translates to: SWRSLLWSSVDSGLSVCRIFSKS*IHFSQQ
Trigger: TTGCTGTGAAAAGTGGATCCAACTTTTGGAGAAGAT...TCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCTCTGCCGAACACCCTaGACAGCATTCTGCCACCGA +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELCRTP*TAFCHR
Trigger: TCGGTGGCAGAATGCTGTCCAGGGTGTTCGGCAGAG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCACGTCTCCTCGATTTTCATGCGCCGCTCCATGGACATGGCACAAATGTTCCTATTTTCTTTTCACACTaGTCCCAGGTCTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: PRLLDFHAPLHGHGTNVPIFFSH*SQVSTV
Trigger: CACTGTAGAGACCTGGGACCAGTGTGAAAAGAAAAT...AGGAACATTTGTGCCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp TCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTCTCCTGTTTACGTATaGCCACCCTTAAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: SGFPARPLNLGTLAPVTVSPVYV*PPLSRG
Trigger: ACCTCTGCTTAAGGGTGGCCATACGTAAACAGGAGA...AACAGTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTGTCCAGGCTCCTGGTaGTCTGCTGGATCGAGTCAC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKICPGSW*SAGSSH
Trigger: GTGACTCGATCCAGCAGACCACCAGGAGCCTGGACA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCATGCGCCGCTCCATaGACATGGCACAAATGTTCC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSCAAP*TWHKCS
Trigger: GGAACATTTGTGCCATGTCCATGGAGCGGCGCATGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTCTGCTTCAGCCTGCTaGCCGTGTCTGTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSSASAC*PCLCGS
Trigger: AGAACCGCACAGACACGGCCAGCAGGCTGAAGCAGA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTCTGCTTCAGCCTGCTaGCCGTGTCTGTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSASAC*PCLCGS
Trigger: AGAACCGCACAGACACGGCCAGCAGGCTGAAGCAGA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAAGAAGTGCTCCACGTTaGTCAGCTGCAGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSRSAPR*SAAGPS
Trigger: AGATGGACCTGCAGCTGACCAACGTGGAGCACTTCT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTGGAAGCCATTCAGTTaGCGCATCTTGTCATCGGCG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCWKPFS*RILSSA
Trigger: CGCCGATGACAAGATGCGCCAACTGAATGGCTTCCA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATAATGTAATTTCCTGTTaGAAGCCATTCAGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDNVISC*KPFSWR
Trigger: GCGCCAACTGAATGGCTTCCAACAGGAAATTACATT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACAGAGGTGAGCCGCCGGTaGAACCGGGAGACCCTTCCA +
Preference number: 4 (lower is better)
Translates to: IKSWDTCSRNCLSFFSITEVSRR*NRETLP
Trigger: TGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACCTC...TGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCAGTGCGCTGTAGTATaGGCCCTCCTCGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEQCAVV*ALLVLF
Trigger: GAAGAGGACGAGGAGGGCCCATACTACAGCGCACTG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACGCAGGGGGAACAGGTaGAACATTCCTGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKRRGNR*NIPVTF
Trigger: GAAGGTGACAGGAATGTTCCACCTGTTCCCCCTGCG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATGGCGGAGTCTACTTTaGAGCTCTGTGGATTCGGGG +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKWRSLL*SSVDSG
Trigger: CCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCAGAGCAGGCTCAGCTaGCGGAGTCTACTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIQSRLS*RSLLWS
Trigger: GCTCCAAAGTAGACTCCGCCAGCTGAGCCTGCTCTG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCAGAGCAGGCTCAGCTaGCGGAGTCTACTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRQSRLS*RSLLWS
Trigger: GCTCCAAAGTAGACTCCGCCAGCTGAGCCTGCTCTG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCCGGGGGTCTGCCTTTaGATCGGTGACATGAGCCTT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIPGVCL*IGDMSL
Trigger: AAGGCTCATGTCACCGATCCAAAGGCAGACCCCCGG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGGTGAGGCTGGGTTCTaGGTTCCCTGCAAGGCCATT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIGEAGF*VPCKAI
Trigger: AATGGCCTTGCAGGGAACCCAGAACCCAGCCTCACC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGATGTTGCAGGAGGCTaGTCCCCCGAGTCTACCTCG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKDVAGG*SPESTS
Trigger: CGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACTTTGCTCGGGGAGCTaGCACGGATGTTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGLCSGS*HGCCRR
Trigger: CCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTGGCAATCAGGCAGGTaGTGTAGCACTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIWQSGR*CSTVAS
Trigger: GCTGGCCACAGTGCTACACCACCTGCCTGATTGCCA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACGTGCTGGGCACCCTTaGCAATCAGGCAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGRAGHP*QSGRWC
Trigger: ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCACTCAGATTGGTCTaGGGCCACGTGCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSLRLV*GHVLGT
Trigger: GGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACCAGGGAGCCCGTGCTaGGTAAGCCCAGAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKPGSPC*VSPEEV
Trigger: GACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCCACACCTGGCTACATaGGCGTTCAGCCCATCAACG +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIPHLAT*AFSPST
Trigger: CGTTGATGGGCTGAACGCCCATGTAGCCAGGTGTGG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR TCA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGAGCCCTCATCATATATaGTTCAAGTTCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKESPHHI*FKFLLG
Trigger: TCCCAGAAGGAACTTGAATCATATATGATGAGGGCT...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCGGCTGCAGTGTCATATaGATCTCGGAAGCACATTTC +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCGCSVI*ISEAHF
Trigger: GAAATGTGCTTCCGAGATTCATATGACACTGCAGCC...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCATTTTGCCTTCGGATaGATTCAAAACCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDHFAFG*IQNHKG
Trigger: TCCCTTATGGTTTTGAATTCATCCGAAGGCAAAATG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCACTGCAGCTGATTCCTaGGTAGACTCCTGCACATCA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCTAADS*VDSCTS
Trigger: TGATGTGCAGGAGTCTACTCAGGAATCAGCTGCAGT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGAGCCATTTCCACAGCTaGATCCTTGTTTATTTCCCA +
Preference number: 4 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKESHFHS*ILVYFP
Trigger: TGGGAAATAAACAAGGATTCAGCTGTGGAAATGGCT...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAAAGTAATAAGTGCCTaGAGCAAATTGTCCAAATGC +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSKVISA*SKLSKC
Trigger: GCATTTGGACAATTTGCTTCAGGCACTTATTACTTT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTCCAAAGTAACATGGTaGTGTTTTAGTTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDSKVTW*CFSSAS
Trigger: GGAAGCTGAACTAAAACATCACCATGTTACTTTGGA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTTTCGTGTAGATGCTTTATTTCCAGCCAAGGCTCTTCACTGAAGCTGGGATTTTCTCCACTGCCCTGGTaGCTGCTTCTTTATAGCGTG +
Preference number: 4 (lower is better)
Translates to: LSCRCFISSQGSSLKLGFSPLPW*LLLYSV
Trigger: CACGCTATAAAGAAGCAGTCACCAGGGCAGTGGAGA...AAATCCCAGCTTCAGTGAAGAGCCTTGGCTGGAAATAAAGCATCTACACGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCACAGTGCTAGCATGGTaGCTCAGTGTCCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCTVLAW*LSVLKE
Trigger: CTCTTTGAGGACACTGAGTCACCATGCTAGCACTGT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCAGCCATTCGCTaGATCTGTGGAAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSSAIR*ICGRLS
Trigger: GGAAAGCCTTCCACAGATTCAGCGAATGGCTGATGA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATGCTTCAAATGCTGGTaGAGGTTTAGTACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSCFKCW*RFSTVA
Trigger: GGCCACCGTACTAAACCTTCACCAGCATTTGAAGCA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAGTGAAGACCAAGACTaGGGCGATGGCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSSEDQD*GDGSAF
Trigger: GAAGGCAGAGCCATCGCCTCAGTCTTGGTCTTCACT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTTGGCCCTGGGGTaGCAAGATCGAGTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKILALG*QDRVWN
Trigger: GTTCCAGACTCGATCTTGTCACCCCAGGGCCAAAAT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCTTGCAGAGACTaGAGGTTCTCCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSSCRD*RFSTWH
Trigger: ATGCCAGGTGGAGAACCTTCAGTCTCTGCAAGATGA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCATCTTGCAGAGACTaGAGGTTCTCCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSSCRD*RFSTWH
Trigger: ATGCCAGGTGGAGAACCTTCAGTCTCTGCAAGATGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGGTGGCTGGTGTCAGTaGGGAAGCGAAACAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKGGWCQ*GSETSS
Trigger: AGAACTTGTTTCGCTTCCTCACTGACACCAGCCACC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATTATGGAGGTCCTCGTaGAGCTCTGGAAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLWRSS*SSGRGS
Trigger: AGATCCTCTTCCAGAGCTTCACGAGGACCTCCATAA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTCACCCTTGATCCGATaGCATCAAAAAGATGTTGCC +
Preference number: 4 (lower is better)
Translates to: SGFPARPLNLGTLAPVTVSPLIR*HQKDVA
Trigger: GGCAACATCTTTTTGATGTCATCGGATCAAGGGTGA...AACAGTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR TCA 90 bp GTAATTTCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCCAGCTTCTTCACCCTTaGTCCGATGACATCAAAAAG +
Preference number: 4 (lower is better)
Translates to: VISCWKPFSWRILSSASLQLLHP*SDDIKK
Trigger: CTTTTTGATGTCATCGGATCAAGGGTGAAGAAGCTG...GAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGAAATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTCCTCTCAGCTGACTTaGGCCAGTCCTCAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSSQLT*ASPQSE
Trigger: CTCGCTTTGAGGACTGGCTCAAGTCAGCTGAGAGGA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAGGGGCTCGCTCTTCTaGATCAGCTGCTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGRGSLF*ISCSPN
Trigger: GTTTGGGGAGCAGCTGATTCAGAAGAGCGAGCCCCT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAAGGGGCTCGCTCTTCTaGATCAGCTGCTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKRGSLF*ISCSPN
Trigger: GTTTGGGGAGCAGCTGATTCAGAAGAGCGAGCCCCT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTTTGGATCGGTGACATaGGCCTTCTGCCTCCGGTTC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSFGSVT*AFCLRF
Trigger: GAACCGGAGGCAGAAGGCTCATGTCACCGATCCAAA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTGCCCGGACCACCCTTaGGAGGAAGGAGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNCPDHP*EEGALW
Trigger: CCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAACCCCCAAAAAGGCTaGCCTGAGCAGATGCTTGAG +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKNPQKG*PEQMLE
Trigger: CTCAAGCATCTGCTCAGGTCAGCCTTTTTGGGGGTT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCTTTATTAGCTCCGTaGCTGCTCCTGCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSLLAP*LLLQSR
Trigger: CCTGCTCTGCAGGAGCAGTCACGGAGCTAATAAAGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR TCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACACATCAGCCATTCGCTaGATCTGTGGAAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SSTWDSISAGTMVYISEYTSAIR*ICGRLS
Trigger: GGAAAGCCTTCCACAGATTCAGCGAATGGCTGATGT...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACTGGATCGCGCCTTTTaGTCGCTCTCCCTCTCGCTT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPLDRAF*SLSLSL
Trigger: AAGCGAGAGGGAGAGCGAGCAAAAGGCGCGATCCAG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAACTGAGGGAGAAGTGTaGCTGGCCAACTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSTEGEV*LANCEF
Trigger: AAACTCACAGTTGGCCAGGCACACTTCTCCCTCAGT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCCCGAGGCAACTGTTaGCCAGAAAGTACTTCTAGC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSRGNC*PESTSS
Trigger: GCTAGAAGTACTTTCTGGGCAACAGTTGCCTCGGGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGCCTTTAATACAAAGTTaGCTGGCTCTTCTAAGCGGT +
Preference number: 4 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKEPLIQS*LALLSG
Trigger: ACCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGG...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCGTATCTTCACTCCTCTaGACCCTGTGGTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCVSSLL*TLWFIP
Trigger: AGGAATGAACCACAGGGTGCAGAGGAGTGAAGATAC...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCAGTACGCTGTCCACCTaGTTTATTTTACTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: SCCKESSSSFARAWHMDSSTLST*FILLFL
Trigger: AAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACT...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGAGACTTTCGTGTAGATaGTTTATTTCCAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKERLSCR*FISSQG
Trigger: GCCTTGGCTGGAAATAAAGCATCTACACGAAAGTCT...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGTGGTCAAGGCAATCATaGTTTGGTTCCCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: SREFSCSERRQKVFQSFEWSRQS*FGSLPV
Trigger: AACGGGCAGGGAACCAAAGCATGATTGCCTTGACCA...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCGATTCCACAGACTGCTaGCTAGCTAGAATGCCATCA +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCDSTDC*LARMPS
Trigger: TGATGGCATTCTAGCTAGGCAGCAGTCTGTGGAATC...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGAATGTAAAAGATTGTaGTTCTGTTCTGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQECKRL*FCSESS
Trigger: GGAAGATTCAGAACAGAAGCACAATCTTTTACATTC...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCTCTTCCTCGACTGCTaGCAGGTAAGACATGGAGCC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSLFLDC*QVRHGA
Trigger: GGCTCCATGTCTTACCTGGCAGCAGTCGAGGAAGAG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCTCTTCCTCGACTGCTaGCAGGTAAGACATGGAGCC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRLFLDC*QVRHGA
Trigger: GGCTCCATGTCTTACCTGGCAGCAGTCGAGGAAGAG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACACCTCTTCCTCGACTaGTGCCAGGTAAGACATGGA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKHLFLD*CQVRHG
Trigger: TCCATGTCTTACCTGGCAGCAGTCGAGGAAGAGGTG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTGGAATTATCAGAGGTaGTTATTTTCCCATATGCTT +
Preference number: 4 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQWNYQR*LFSHML
Trigger: AAGCATATGGGAAAATAAGCACCTCTGATAATTCCA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGGCTCCAAACCTCCTTaGGCGTCAGAAGAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIGSKPP*ASEESR
Trigger: TCTGGACTCTTCTGACGCGCAAGGAGGTTTGGAGCC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCTTCTACAGACAGCTaGAGCCTGAGTGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIASTDS*SLSVLQ
Trigger: CTGGAGCACACTCAGGCTGCAGCTGTCTGTAGAAGC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATATTTTGGCAGAGTATaGTTGGATCAACAACATGTC +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSYFGRV*LDQQHV
Trigger: GACATGTTGTTGATCCAAGCATACTCTGCCAAAATA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAGCTCCTTTATGTCCTaGAGGGCTGGGGGCAGGATC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSSFMS*RAGGRI
Trigger: GATCCTGCCCCCAGCCCTGCAGGACATAAAGGAGCT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACCACATCCACTTTGAGTaGTTCTTCTATCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GFWVPCKAIKSWDTCSRNHIHFE*FFYLLQ
Trigger: TTGGAGAAGATAGAAGAAGCACTCAAAGTGGATGTG...GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAACGTCACCCTTCCTCTaGCGAACACCCTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPTSPFL*RTPWTA
Trigger: TGCTGTCCAGGGTGTTCGGCAGAGGAAGGGTGACGT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAACTGGTCACCCATCTaGTTTAACTGTAACTTGTTT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSNWSPI*FNCNLF
Trigger: AAACAAGTTACAGTTAAAGCAGATGGGTGACCAGTT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTCTCCTCGATTTTCATaGGCCGCTCCATGGACATGG +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSPRFS*AAPWTW
Trigger: CCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGAATGCTCTCCCTGGTaGCCTCAAATTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCECSPW*PQILPS
Trigger: AGAGGGAAGAATTTGAGGGCACCAGGGAGAGCATTC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGTGGTTTATAAGGGGTaGTGGACGCAGGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEVVYKG*WTQGEQ
Trigger: CTGTTCCCCCTGCGTCCAGCACCCCTTATAAACCAC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCTTTGCCACCATCCGTaGCTGGAGGTAATAGTAGCT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCLCHHP*LEVIVA
Trigger: AGCTACTATTACCTCCAGGCACGGATGGTGGCAAAG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAAGTCCCCCGTCTTCCTaGTGTGGGTTGCCATTCAGG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSPPSS*CGLPFR
Trigger: CCTGAATGGCAACCCACAGCAGGAAGACGGGGGACT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATGCTCTGAACTGCTTTaGTCGGGGAGCTGGCACGGA +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPCSELL*SGSWHG
Trigger: TCCGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000458046.6
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACTCACTGCTCTGAACTaGTTTGCTCGGGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKLTALN*FARGAG
Trigger: GCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000458046.6
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTGCTGCCGGGGACCCTaGTCTCTGTCTCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNCCRGP*SLSPPR
Trigger: GCGAGGAGGAGACAGAGAGCAGGGTCCCCGGCAGCA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACACTGCTCTGAACTTTaGTCGGGGAGCTGGCACGGA +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPHCSEL*SGSWHG
Trigger: TCCGTGCCAGCTCCCCGAGCAAAGTTCAGAGCAGTG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACAGTGGAAGCACAGCTaGACAAGTGGTCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGQWKHS*TSGPKA
Trigger: GGCCTTGGGACCACTTGTGCAGCTGTGCTTCCACTG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR CCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCGTGAAGGCTTTCTTCTaGGTGTCTTCCTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCVKAFF*VSSCSA
Trigger: AGCTGAACAGGAAGACACCCAGAAGAAAGCCTTCAC...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AGAGAGTTCCTCTGTGGTGGCTGCCTCTTTTGTTTTGGAAATTTCAGGGAGTTCAGGGAGAAGTGTGCCTaGCCAACTGTGAGTTTATCC +
Preference number: 4 (lower is better)
Translates to: REFLCGGCLFCFGNFREFREKCA*PTVSLS
Trigger: GGATAAACTCACAGTTGGCCAGGCACACTTCTCCCT...GAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGGATCCAAAACAGATTTaGCTTCTGCCTCCCAGATTT +
Preference number: 4 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKEDPKQI*LLPPRF
Trigger: AAATCTGGGAGGCAGAAGCCAAATCTGTTTTGGATC...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATTGTTGTTTTGCAGGTaGTGTTCAAGAATATCTCTG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSLLFCR*CSRISL
Trigger: CAGAGATATTCTTGAACACCACCTGCAAAACAACAA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGAGTGTGTTGTCCCACTaGTTGCTGATGTCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SREFSCSERRQKVFQSFESVLSH*LLMSVR
Trigger: CCTCACTGACATCAGCAACCAGTGGGACAACACACT...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCCTGCACATCAGAAGTaGCCTGCTTCTCTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIPAHQK*PASLCL
Trigger: CAGGCAGAGAGAAGCAGGCCACTTCTGATGTGCAGG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTTAGTTCAGCTTCCGTaGCAGCTGTCTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSLVQLP*QLSPPW
Trigger: CCAGGGTGGAGACAGCTGCCACGGAAGCTGAACTAA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTTAGTTCAGCTTCCGTaGCAGCTGTCTCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELVQLP*QLSPPW
Trigger: CCAGGGTGGAGACAGCTGCCACGGAAGCTGAACTAA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAGCCAACTGATAAGCTCCTTCACATGTGCTTTGGGCAGATGCTTCTTCACATGTTCTCAGTGAGGTCCTaGATGTGTGCTACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: EPTDKLLHMCFGQMLLHMFSVRS*MCATVD
Trigger: ATCCACAGTAGCACACATCCAGGACCTCACTGAGAA...CATGTGAAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTTATCAGTTGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACTGCATTCTTCCACCTaGGATTCAATCTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLHSST*DSISAG
Trigger: CCCTGCAGAGATTGAATCCCAGGTGGAAGAATGCAG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCTCCATTTTGGCCCTaGGGTGACAAGATCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSPFWP*GDKIES
Trigger: AGACTCGATCTTGTCACCCCAGGGCCAAAATGGAGA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACTTCATCTCTTAGTTTaGCCACTCGGCTCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKLHLLV*PLGSRR
Trigger: ACGCCGAGAGCCGAGTGGCCAAACTAAGAGATGAAG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATTGCCGATAACCTCCTaGAGTTTCTCCCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLPITS*SFSQLP
Trigger: AGGGAGTTGGGAGAAACTCCAGGAGGTTATCGGCAA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTGGGCCTTCTGCAACTaGTCTGCAATGGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLWAFCN*SAMAWF
Trigger: GAACCAAGCCATTGCAGACCAGTTGCAGAAGGCCCA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCCAGTGCCGTGGCCGTaGCCCGAATCCATTGCCGGT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNPVPWP*PESIAG
Trigger: ACCGGCAATGGATTCGGGCCACGGCCACGGCACTGG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACTCTGCCGAACACCCTaGACAGCATTCTGCCACCGA +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPLCRTP*TAFCHR
Trigger: TCGGTGGCAGAATGCTGTCCAGGGTGTTCGGCAGAG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCACTGCAGATAGCAGGTaGCTGGTGTCAGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLTADSR*LVSVRK
Trigger: CTTCCTCACTGACACCAGCCACCTGCTATCTGCAGT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAGGCTGAAGCGCTCCTaGCCCTTCACTGCAGATAGC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPRLKRS*PFTADS
Trigger: GCTATCTGCAGTGAAGGGCCAGGAGCGCTTCAGCCT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCATCATCTCTGCCAGCTaGGGCTCCATGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLIISAS*GSMSFQ
Trigger: CTGGAAAGACATGGAGCCCCAGCTGGCAGAGATGAT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCATAAACAACAGGCTTaGAAAGCTCAGACTCAATTC +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDHKQQA*KAQTQF
Trigger: GAATTGAGTCTGAGCTTTCCAAGCCTGTTGTTTATG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACTCCTGGTGGTCTGCTaGATCGAGTCACACTCGGTC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGLLVVC*IESHSV
Trigger: GACCGAGTGTGACTCGATCCAGCAGACCACCAGGAG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGTCTGTCCAGGCTCCTaGTGGTCTGCTGGATCGAGT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPVCPGS*WSAGSS
Trigger: ACTCGATCCAGCAGACCACCAGGAGCCTGGACAGAC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATCTGCTTCAGCCTGCTaGCCGTGTCTGTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGSASAC*PCLCGS
Trigger: AGAACCGCACAGACACGGCCAGCAGGCTGAAGCAGA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTGGAAGCCATTCAGTTaGCGCATCTTGTCATCGGCG +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLWKPFS*RILSSA
Trigger: CGCCGATGACAAGATGCGCCAACTGAATGGCTTCCA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCCCACGTCGCCTGTGTaGTCCCACTCCAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNPTSPV*SHSRGM
Trigger: CATCCCCCTGGAGTGGGACCACACAGGCGACGTGGG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACAGTGCGCTGTAGTATaGGCCCTCCTCGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPQCAVV*ALLVLF
Trigger: GAAGAGGACGAGGAGGGCCCATACTACAGCGCACTG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCGCAGGGGGAACAGGTaGAACATTCCTGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRRRGNR*NIPVTF
Trigger: GAAGGTGACAGGAATGTTCCACCTGTTCCCCCTGCG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTGGCGGAGTCTACTTTaGAGCTCTGTGGATTCGGGG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEWRSLL*SSVDSG
Trigger: CCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAACCGGGCAAAGTTGTTaGCCTGAGTGCAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKTGQSC*PECSCS
Trigger: ACTACAGCTGCACTCAGGCCAACAACTTTGCCCGGT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCTAAGTCACTCAGATTaGTCTGGGGCCACGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKILSHSD*SGATCW
Trigger: CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCAGGTTCCCTGCTCCTaGGGAGGAACACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLQVPCS*GGTQSE
Trigger: TTCAGATTGTGTTCCTCCCCAGGAGCAGGGAACCTG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATAATTCACAAAGTGCTTaGCTCTTCAGGAAACTGACA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDNSQSA*LFRKLT
Trigger: TGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGCACAGCTGCACAAGTaGTCCCAAGGCCAAGTGACG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPAQLHK*SQGQVT
Trigger: CGTCACTTGGCCTTGGGACCACTTGTGCAGCTGTGC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAAGTTTATCCAGCACGTaGAGGCTTTCTTCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSLSST*RLSSGC
Trigger: ACACCCAGAAGAAAGCCTTCACGTGCTGGATAAACT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGTGCCTGGCCAACTGTaGGTTTATCCAGCACGTGAA +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEVPGQL*VYPARE
Trigger: TTCACGTGCTGGATAAACTCACAGTTGGCCAGGCAC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGGCAAGCTTCTCAATATaGAAGTGCAGGATAATTGTC +
Preference number: 4 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKEASFSI*KCRIIV
Trigger: GACAATTATCCTGCACTTTCATATTGAGAAGCTTGC...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCATGCATTAATCTGGTaGTCGAGGCCATCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIHALIW*SRPSQA
Trigger: AGCCTGGGATGGCCTCGATCACCAGATTAATGCATG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGTGATCCTGGGAGGCTaGCAAATCTTCATCCATAAG +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSVILGG*QIFIHK
Trigger: CTTATGGATGAAGATTTGTCAGCCTCCCAGGATCAC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGGTACCAATGGCAAGTaGTTTTCATCCTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDGTNGK*FSSLFS
Trigger: TGAAAATAAGGATGAAAATCACTTGCCATTGGTACC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACTCTTCACTTCTTGTTaGCTCTTCTGTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLFTSC*LFCEGS
Trigger: GCTGCCTTCACAGAAGAGTCAACAAGAAGTGAAGAG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCTCAGCATCAATGAGATaGAATCCCTGGATGGCCATT +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCSASMR*NPWMAI
Trigger: AATGGCCATCCAGGGATTTCATCTCATTGATGCTGA...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACAGCAGTGCTGCCACTaGGTGCATGGCAGTTGGATT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKQQCCH*VHGSWI
Trigger: AATCCAACTGCCATGCACTCAGTGGCAGCACTGCTG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCATGTTCTCGAACGTaGCCGTCCAAGTTTTGCACA +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSCSRT*PSKFCT
Trigger: TGTGCAAAACTTGGACGGTCACGTTCGAGAACATGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACTCATGTTCTCGAACGTaGCCGTCCAAGTTTTGCACA +
Preference number: 4 (lower is better)
Translates to: SSTWDSISAGTMVYISEYSCSRT*PSKFCT
Trigger: TGTGCAAAACTTGGACGGTCACGTTCGAGAACATGA...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAGAGTTCCTCTGTGGTGGCTGCCTCTTTTGTTTTGGAAATTTCAGGGAGTTCGACGCAAACCTGGTATaGATCATGTTCTCGAACGTG +
Preference number: 4 (lower is better)
Translates to: REFLCGGCLFCFGNFREFDANLV*IMFSNV
Trigger: CACGTTCGAGAACATGATTCATACCAGGTTTGCGTC...GAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCACTGCAGCTGATTCCTaGGTAGACTCCTGCACATCA +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLTAADS*VDSCTS
Trigger: TGATGTGCAGGAGTCTACTCAGGAATCAGCTGCAGT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTCTCCACTGCCCTGGTaGCTGCTTCTTTATAGCGTG +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKISPLPW*LLLYSV
Trigger: CACGCTATAAAGAAGCAGTCACCAGGGCAGTGGAGA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATTCCCAGTTTCTCAGTaGGGTCCTGGATGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKFPVSQ*GPGCVL
Trigger: TAGCACACATCCAGGACCTCACTGAGAAACTGGGAA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCGAGCCGACACAATCTTaGGCAAACATATGCCATCAT +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCEPTQS*ANICHH
Trigger: ATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTC...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACGGCCTTATTCAACTGTaGGGTTCTACACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SSTWDSISAGTMVYISEYGLIQL*GSTLCS
Trigger: AGAGCAGAGTGTAGAACCTCACAGTTGAATAAGGCC...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGTCAGCTTGGTCTGGTaGCATATGTTCAAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSVSLVW*HMFKGE
Trigger: TTCTCCCTTGAACATATGTCACCAGACCAAGCTGAC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACTCCACCTTCCTCTaGTGTTACAGCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGHSTFL*CYSWQP
Trigger: AGGCTGCCAGCTGTAACATCAGAGGAAGGTGGAGTG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAGTGAAGACCAAGACTaGGGCGATGGCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGSEDQD*GDGSAF
Trigger: GAAGGCAGAGCCATCGCCTCAGTCTTGGTCTTCACT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCTGGAAGTTGAGTTATaGGCATTGTCCATTTTTGTT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDLEVEL*ALSIFV
Trigger: AACAAAAATGGACAATGCTCATAACTCAACTTCCAG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAAGATGCAGAACTTGGTaGATGCACGGAGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSRCRTW*MHGVFI
Trigger: GATGAAGACTCCGTGCATTCACCAAGTTCTGCATCT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATGTCCTGAAGTTGACTaGTTCTCCTACCCACAGACT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSCPEVD*FSYPQT
Trigger: AGTCTGTGGGTAGGAGAATCAGTCAACTTCAGGACA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACGTGTACAACACCTCTaGGGAATTTGGGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPRVQHL*GIWAGC
Trigger: GCAGCCTGCCCAAATTCCTCAGAGGTGTTGTACACG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAATCGGCGTCACTCTCTaGGAAGTGCTCCACGTTGGT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKIGVTL*EVLHVG
Trigger: ACCAACGTGGAGCACTTCTCAGAGAGTGACGCCGAT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCCAAACACAATGAGCTaGTCAATCTTGTTGGTATTT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDPNTMS*SILLVF
Trigger: AAATACCAACAAGATTGATCAGCTCATTGTGTTTGG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGCTCCCCAAACACAATaGGCTGATCAATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSAPQTQ*ADQSCW
Trigger: CCAACAAGATTGATCAGCTCATTGTGTTTGGGGAGC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCTGTCGAAGGCACCTaGCTGCTGCTCTGTGATACC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSVEGT*LLLCDT
Trigger: GGTATCACAGAGCAGCAGTCAGGTGCCTTCGACAGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATGAGAAGGCCTTGCTGCTCACGTTaGCAGAGACCACTAATGCCT +
Preference number: 4 (lower is better)
Translates to: CTFSSASIQSSPCPLMRRPCCSR*QRPLMP
Trigger: AGGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGG...CCTTCTCATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCCTTGCTGCTCACGTTaGCAGAGACCACTAATGCCT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIPCCSR*QRPLMP
Trigger: AGGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTATGGAGATCGTCGATaGCCCAGGAACCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLYGDRR*PRNPVH
Trigger: ATGAACAGGGTTCCTGGGGCATCGACGATCTCCATA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACTCCCGAGGCAACTGTTaGCCAGAAAGTACTTCTAGC +
Preference number: 4 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHSRGNC*PESTSS
Trigger: GCTAGAAGTACTTTCTGGGCAACAGTTGCCTCGGGA...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATTAGCCACTTTTAGTTaGCCTGTGAATTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSLATFS*PVNSSF
Trigger: AAATGAAGAATTCACAGGGCAACTAAAAGTGGCTAA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAGCCAACTGATAAGCTCCTTCACATGTGCTTTGGGCAGATGCTTCTTCACATGAGCTTCTTGAATCTTTaGCTGAAGCCCAGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: EPTDKLLHMCFGQMLLHMSFLNL*LKPSCE
Trigger: CTCACAACTGGGCTTCAGGCAAAGATTCAAGAAGCT...CATGTGAAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTTATCAGTTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCCTGAATTTGTTGTTTTaGAGGTGGTGTTCAAGAATA +
Preference number: 4 (lower is better)
Translates to: SCCKESSSSFARAWHMDSLNLLF*RWCSRI
Trigger: TATTCTTGAACACCACCTGCAAAACAACAAATTCAG...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp TTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGTCTGAGGACTCCATGACCTaGAATTCAAGAGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: FLRFLWSSWSLSSCCKESEDSMT*NSRGIS
Trigger: TGAAATACCTCTTGAATTGCAGGTCATGGAGTCCTC...AGACTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTTTTGCTGTAGAATCTaGTGTTGTATCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDFCCRI*CCISSS
Trigger: ACTAGAGGAGATACAACAGCAGATTCTACAGCAAAA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCGCTGCTCTCAGCCTaGTTCATGATGGTCTCTATT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSLLSA*FMMVSI
Trigger: AATAGAGACCATCATGAAGCAGGCTGAGAGCAGCGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGCAACATTCCATCTCCTaGTTAGCAGATGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SREFSCSERRQKVFQSFEQHSIS*LADASL
Trigger: CAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTG...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCCAGTGGCTTAATGGCTaGTTTCTTTGCTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCQWLNG*FLCFQL
Trigger: CAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTG...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATGTTGCTGCTGCTGTTaGAGAGAAATCTCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSCCCCC*REISVS
Trigger: GGACACTGAGATTTCTCTGCAACAGCAGCAGCAACA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTTTCGTGTAGATGCTTTATTTCCAGCCAAGGCTCTTCACTGAAGCTGGGATTTCATGCTTTGGTTCCCTaGCCGTTCTTCTGGAGACTT +
Preference number: 4 (lower is better)
Translates to: LSCRCFISSQGSSLKLGFHALVP*PFFWRL
Trigger: AAGTCTCCAGAAGAACGGGCAGGGAACCAAAGCATG...AAATCCCAGCTTCAGTGAAGAGCCTTGGCTGGAAATAAAGCATCTACACGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTGGTCAAGGCAATCATaGTTTGGTTCCCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLWSRQS*FGSLPV
Trigger: AACGGGCAGGGAACCAAAGCATGATTGCCTTGACCA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAATAATGCCTGATATTTaGCATGTTCTTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSIMPDI*HVLPQM
Trigger: CATTTGAGGAAGAACATGGCAAATATCAGGCATTAT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCATTCAAGACATTTGTaGGCAAATCAATGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDHSRHL*ANQCLC
Trigger: ACACAAGCATTGATTTGCGCACAAATGTCTTGAATG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGTCAGTAACAGCTGTTaGTTCTCCACGTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCVSNSC*FSTFSP
Trigger: TGGAGAGAACGTGGAGAAGCAACAGCTGTTACTGAC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCACCTCTTCCTCGACTaGTGCCAGGTAAGACATGGA +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRHLFLD*CQVRHG
Trigger: TCCATGTCTTACCTGGCAGCAGTCGAGGAAGAGGTG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTGTTTCCGGCTCAACTaGCACGTTGGCTTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRCFRLN*HVGLLQ
Trigger: CTGCAACAAGCCAACGTGGCAGTTGAGCCGGAAACA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATGCTGTTCCAGCACCTaGTGCATGTCTGCGTTTAAT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSCCSST*CMSAFN
Trigger: ATTAAACGCAGACATGCAGCAGGTGCTGGAACAGCA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACAGCTTTCAGGGACTTaGTTCTACAGACAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKQLSGT*FYRQLQ
Trigger: CTGCAGCTGTCTGTAGAAGCAAGTCCCTGAAAGCTG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATTCATCTCCCCCAGGTaGTCTGCAAACTCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKFISPR*SANSVL
Trigger: AAGAACGGAGTTTGCAGAGCACCTGGGGGAGATGAA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTATTCCATGTACACGGTaGCACTGGCGGTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIIPCTR*HWRFIS
Trigger: GGAGATGAACCGCCAGTGGCACCGTGTACATGGAAT...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCTTCTGCAACTGGTCTaGAATGGCTTGGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLLLQLV*NGLVHL
Trigger: CAGGTGAACCAAGCCATTGCAGACCAGTTGCAGAAG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTGGGGGCAGGATCTCTaGCAGGTTGTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRWGQDL*QVVSRH
Trigger: ATGTCTGGAAACAACCTGGCAGAGATCCTGCCCCCA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCATCTTTAACATTTCCTGGGGGCAGGATCTCTaGCAGGTTGTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: LSSISWISEGGFAIFNISWGQDL*QVVSRH
Trigger: ATGTCTGGAAACAACCTGGCAGAGATCCTGCCCCCA...GGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTTCTGCACATCATGCTaGAGCTCCTTTATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCFCTSC*SSFMSC
Trigger: GCAGGACATAAAGGAGCTGCAGCATGATGTGCAGAA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGTGAAATCTTGCCACTaGCTCACCAGCCCATCAACG +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIVKSCH*LTSPST
Trigger: CGTTGATGGGCTGGTGAGGCAGTGGCAAGATTTCAC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTTCGAGCCAACCAGGTaGGAAGGTTGCTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCFEPTR*EGCSCF
Trigger: AAAACATGAGCAACCTTCGCACCTGGTTGGCTCGAA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCACGGACTCCACCCCTaGGCTGTGTTGTTCAATATC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIHGLHP*AVLFNI
Trigger: GATATTGAACAACACAGCGCAGGGGTGGAGTCCGTG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGACACTCGGTCTCATTTaGACAGGCATCGGAGTCGTG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPETLGLI*TGIGVV
Trigger: CACGACTCCGATGCCTGTGCAAATGAGACCGAGTGT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCATCTTTAACATTTCCTCGTCTAAAAACTTCTaGCACAGGCGCCACGTCTCC +
Preference number: 4 (lower is better)
Translates to: LSSISWISEGGFAIFNISSSKNF*HRRHVS
Trigger: GGAGACGTGGCGCCTGTGGCAGAAGTTTTTAGACGA...GGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTCGTCTAAAAACTTCTaGCACAGGCGCCACGTCTCC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSSKNF*HRRHVS
Trigger: GGAGACGTGGCGCCTGTGGCAGAAGTTTTTAGACGA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACAGGGCTGTCGGGAACATaGCACGAGTGGCCATCCGAA +
Preference number: 4 (lower is better)
Translates to: IKSWDTCSRNCLSFFSITGLSGT*HEWPSE
Trigger: TTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCC...TGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGTGGTTTATAAGGGGTaGTGGACGCAGGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPVVYKG*WTQGEQ
Trigger: CTGTTCCCCCTGCGTCCAGCACCCCTTATAAACCAC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCTTTGCCACCATCCGTaGCTGGAGGTAATAGTAGCT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLLCHHP*LEVIVA
Trigger: AGCTACTATTACCTCCAGGCACGGATGGTGGCAAAG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTCGGGGCTCTCGGTTTaGAGAAATTCCTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSSGLSV*RNSLLL
Trigger: GAGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAAGCTCCTTTTCCAGTTaGATTAGTTCCCTCCGACAC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSSFSS*ISSLRH
Trigger: GTGTCGGAGGGAACTAATGCAACTGGAAAAGGAGCT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGTGAAGGCTTTCTTCTaGGTGTCTTCCTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSVKAFF*VSSCSA
Trigger: AGCTGAACAGGAAGACACCCAGAAGAAAGCCTTCAC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAATGTTCTAGATTCCACTaGGCTAGTGTCTCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: LPWQLSPPWELSVFHFLECSRFH*ASVSKG
Trigger: ACCCTTTGAGACACTAGCCCAGTGGAATCTAGAACA...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTTGTTGTTTTGCAGGTaGTGTTCAAGAATATCTCTG +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDLLFCR*CSRISL
Trigger: CAGAGATATTCTTGAACACCACCTGCAAAACAACAA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGATTTTTGCAGACCTaGTTTATCTTGTCTACAACT +
Preference number: 4 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSRFLQT*FILSTT
Trigger: AGTTGTAGACAAGATAAACCAGGTCTGCAAAAATCT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGATCTGGGTCTTGGCTTaGTCGAGATCCTCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEIWVLA*SRSSLS
Trigger: GCTAAGGGAGGATCTCGACCAAGCCAAGACCCAGAT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTTTCTATGGTCATCCTaGAGTCTCAGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCFLWSS*SLSSCC
Trigger: GCAGCAGCTACTGAGACTCCAGGATGACCATAGAAA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCTTCCTCAGGTTTCTATaGTCATCCTGGAGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCFLRFL*SSWSLS
Trigger: ACTGAGACTCCAGGATGACCATAGAAACCTGAGGAA...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATACCATGCTTGGTAGCCTaGAGGTCAGTGGTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIPCLVA*RSVVKA
Trigger: TGCCTTGACCACTGACCTCCAGGCTACCAAGCATGG...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGTGGCAACGAGGACATaGACTGTCCAAGAACTGTCT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKVATRT*TVQELS
Trigger: AGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCAC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGAATGCCATATTTTaGAATGAAGTTGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDWNAIF*NEVVVC
Trigger: ACAGACCACAACTTCATTCCAAAATATGGCATTCCA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATAGGTCTTCTTTTCTCTaGTTCAAACTCAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDRSSFL*FKLRIC
Trigger: ACAGATTCTGAGTTTGAACCAGAGAAAAGAAGACCT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACCAAGACTGAGGCGATaGCTCTGCCTTCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGPRLRR*LCLLIS
Trigger: GGAGATGAGAAGGCAGAGCCATCGCCTCAGTCTTGG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGTGCCCTCTTCTGTTTaGTTGGGCCTTAGGGAACAT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKVPSSV*LGLREH
Trigger: ATGTTCCCTAAGGCCCAACCAAACAGAAGAGGGCAC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTCTGTTAGCATAGCCTaGCACCCTACCAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSVSIA*HPTSCC
Trigger: ACAGCAGCTGGTAGGGTGCCAGGCTATGCTAACAGA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTCTGTTAGCATAGCCTaGCACCCTACCAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSSVSIA*HPTSCC
Trigger: ACAGCAGCTGGTAGGGTGCCAGGCTATGCTAACAGA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCAGCCTCATGTTGAGTaGCTCCATTATCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSQPHVE*LHYLPG
Trigger: GCCTGGGAGATAATGGAGCCACTCAACATGAGGCTG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTCAGGGCTGGATGCCTaGTTGCTTGCAGATGATTCC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSGLDA*LLADDS
Trigger: GGAATCATCTGCAAGCAACCAGGCATCCAGCCCTGA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCGTCATTTTCAGGGCTaGATGCCTGGTTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRRHFQG*MPGCLQ
Trigger: CTGCAAGCAACCAGGCATCCAGCCCTGAAAATGACG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTCTCCATTTTGGCCCTaGGGTGACAAGATCGAGTCT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSPFWP*GDKIES
Trigger: AGACTCGATCTTGTCACCCCAGGGCCAAAATGGAGA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCTTCATCTCTTAGTTTaGCCACTCGGCTCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKILHLLV*PLGSRR
Trigger: ACGCCGAGAGCCGAGTGGCCAAACTAAGAGATGAAG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAACAAAGCATCTTGCTaGCTCTCAGTGACGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCNKASC*LSVTKG
Trigger: CCCTTTCGTCACTGAGAGCCAGCAAGATGCTTTGTT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCAACTGGTCTGCAATaGCTTGGTTCACCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIATGLQ*LGSPES
Trigger: GGACTCAGGTGAACCAAGCCATTGCAGACCAGTTGC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTGGGCCTTCTGCAACTaGTCTGCAATGGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIWAFCN*SAMAWF
Trigger: GAACCAAGCCATTGCAGACCAGTTGCAGAAGGCCCA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCAATATCAGGTGATTaGGCTGTCAGTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSISGD*AVSAST
Trigger: TGTGCTGGCACTGACAGCCCAATCACCTGATATTGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCTCCTGTTTACGTATaGCCACCCTTAAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSPVYV*PPLSRG
Trigger: ACCTCTGCTTAAGGGTGGCCATACGTAAACAGGAGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCGCCAAGAATCAGTCTaGATTTCTCTGGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLRQESV*ISLGSS
Trigger: GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACGCAGGGGGAACAGGTaGAACATTCCTGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGRRGNR*NIPVTF
Trigger: GAAGGTGACAGGAATGTTCCACCTGTTCCCCCTGCG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTACTTTGGAGCTCTGTaGATTCGGGGCTCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLYFGAL*IRGSRF
Trigger: AAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATCTGCCTCCGGTTCTTaGCACTCGCTAACCACAGCA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGSASGS*HSLTTA
Trigger: TGCTGTGGTTAGCGAGTGCCAAGAACCGGAGGCAGA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTGGTGTACCTCAGCATaGGGTAAAAGGACCGGGCAA +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEWCTSA*GKRTGQ
Trigger: TTGCCCGGTCCTTTTACCCCATGCTGAGGTACACCA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGGTGGTGTAGCACTGTaGCCAGCTATGCCCTCTATG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKGGVAL*PAMPSM
Trigger: CATAGAGGGCATAGCTGGCCACAGTGCTACACCACC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGGTGGTGTAGCACTGTaGCCAGCTATGCCCTCTATG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPGGVAL*PAMPSM
Trigger: CATAGAGGGCATAGCTGGCCACAGTGCTACACCACC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACTAAGTCACTCAGATTaGTCTGGGGCCACGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPLSHSD*SGATCW
Trigger: CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACATTCTGCTGTACCCCATaGGTGGGCTGCTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: IKSWDTCSRNCLSFFSITFCCTP*VGCCSA
Trigger: CGCTGAGCAGCAGCCCACCCATGGGGTACAGCAGAA...TGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAAAGCTGTGGTGGCTTaGAGAGAGGTGGGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPKAVVA*REVGSL
Trigger: CAGAGACCCCACCTCTCTCCAAGCCACCACAGCTTT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CCA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCTACTATGTGCTTCCATaGTTCATGAAGAACAAAGTA +
Preference number: 4 (lower is better)
Translates to: SCCKESSSSFARAWHMDSYYVLP*FMKNKV
Trigger: TACTTTGTTCTTCATGAACCATGGAAGCACATAGTA...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 72 bp GCAGCTCAGAGAGTTCCTCTGTGGTGGCTGCCTCTTTaGTTTTGGAAATTTCAGGGAGTTCTTCCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: AAQRVPLWWLPL*FWKFQGVLPED
Trigger: ATCTTCAGGAAGAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCTGAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGTGCCACATAGGTCATaGTGGACTTTTCATCAGGAT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCVPHRS*WTFHQD
Trigger: ATCCTGATGAAAAGTCCATCATGACCTATGTGGCAC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGTGCCACATAGGTCATaGTGGACTTTTCATCAGGAT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSVPHRS*WTFHQD
Trigger: ATCCTGATGAAAAGTCCATCATGACCTATGTGGCAC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGGTGCCACATAGGTCATaGTGGACTTTTCATCAGGAT +
Preference number: 4 (lower is better)
Translates to: SREFSCSERRQKVFQSFEVPHRS*WTFHQD
Trigger: ATCCTGATGAAAAGTCCATCATGACCTATGTGGCAC...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTCATGCATTAATCTGGTaGTCGAGGCCATCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SSHASVRCPPALFYCFFLHALIW*SRPSQA
Trigger: AGCCTGGGATGGCCTCGATCACCAGATTAATGCATG...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGTGATCCTGGGAGGCTaGCAAATCTTCATCCATAAG +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLVILGG*QIFIHK
Trigger: CTTATGGATGAAGATTTGTCAGCCTCCCAGGATCAC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTTTCGTGTAGATGCTTTATTTCCAGCCAAGGCTCTTCACTGAAGCTGGGATTTTTGTTGACTCTTCTGTaGAGGCAGCTCTTCACACAG +
Preference number: 4 (lower is better)
Translates to: LSCRCFISSQGSSLKLGFLLTLL*RQLFTQ
Trigger: CTGTGTGAAGAGCTGCCTTCACAGAAGAGTCAACAA...AAATCCCAGCTTCAGTGAAGAGCCTTGGCTGGAAATAAAGCATCTACACGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGGCTGCAGTGTCATATaGATCTCGGAAGCACATTTC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLGCSVI*ISEAHF
Trigger: GAAATGTGCTTCCGAGATTCATATGACACTGCAGCC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGGTTCAAGACATTCGGTaGCCAAGGCTTTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: SREFSCSERRQKVFQSFEVQDIR*PRLWYS
Trigger: AGAATACCAAAGCCTTGGTCACCGAATGTCTTGAAC...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCATGTTCTCGAACGTaGCCGTCCAAGTTTTGCACA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSCSRT*PSKFCT
Trigger: TGTGCAAAACTTGGACGGTCACGTTCGAGAACATGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCCTCAACCGCTATTTaGTCCACAGGCTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSSTAI*STGLSE
Trigger: TTCTGATAAGCCTGTGGATCAAATAGCGGTTGAGGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTACTGCAGCTGATTCCTaGGTAGACTCCTGCACATCA +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSTAADS*VDSCTS
Trigger: TGATGTGCAGGAGTCTACTCAGGAATCAGCTGCAGT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGCAGCAAGGTATTCCTaGAAATCTCTGAGGACACAA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCAARYS*KSLRTQ
Trigger: TTGTGTCCTCAGAGATTTTCAGGAATACCTTGCTGC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACGCACTTTCTGATCTGTaGAAGAATGTCATCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSTWDSISAGTMVYISEYALSDL*KNVIWE
Trigger: CTCCCAGATGACATTCTTTCACAGATCAGAAAGTGC...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATACCAGCATTTGGTATTaGTTCCGTAAGTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYTSIWY*FRKSSR
Trigger: CCTAGAGGACTTACGGAATCAATACCAAATGCTGGT...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACTTAAAATTTGGGCATTaGGCCGTCTGCTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHLKFGH*AVCFPE
Trigger: CTCCGGAAAGCAGACGGCTCAATGCCCAAATTTTAA...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATCTCCACTGCCCTGGTaGCTGCTTCTTTATAGCGTG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGSPLPW*LLLYSV
Trigger: CACGCTATAAAGAAGCAGTCACCAGGGCAGTGGAGA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTGGCTTCGAGGGAAGTaGTGCTCTCCACTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNWLRGK*CSPLPW
Trigger: CCAGGGCAGTGGAGAGCATCACTTCCCTCGAAGCCA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTTCCCAGTTTCTCAGTaGGGTCCTGGATGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEFPVSQ*GPGCVL
Trigger: TAGCACACATCCAGGACCTCACTGAGAAACTGGGAA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACATTCTGGATACTTCTaGTGCGCTGAAGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSHSGYF*CAEEVE
Trigger: CTCTACTTCTTCAGCGCATCAGAAGTATCCAGAATG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACTCTGTGATACTTGCTaGTACTGCTGGAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLCDTC*YCWKGI
Trigger: GATTCCTTTCCAGCAGTATCAGCAAGTATCACAGAG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGGCCTTATTCAACTGTaGGGTTCTACACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLGLIQL*GSTLCS
Trigger: AGAGCAGAGTGTAGAACCTCACAGTTGAATAAGGCC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTGCTTCAAATGCTGGTaGAGGTTTAGTACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRCFKCW*RFSTVA
Trigger: GGCCACCGTACTAAACCTTCACCAGCATTTGAAGCA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAATTGTTCCAGAGGATaGGGAAGCTCTGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCNCSRG*GSSVFF
Trigger: GAAGAAGACAGAGCTTCCTCATCCTCTGGAACAATT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACTGTGCTTCTCCTaGAGCATCATCTGGACTTTT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSLCFS*SIIWTF
Trigger: AAAAGTCCAGATGATGCTTCAGGAGAAGCACAGTGA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATGCTCCAGGCAGACTTaGAGGTTGTCAAAACATTCA +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSCSRQT*RLSKHS
Trigger: TGAATGTTTTGACAACCTTCAAGTCTGCCTGGAGCA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGTTTCTTTCAGGTaGAGAAGCTGGTTCCCGATA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSVSFR*RSWFPI
Trigger: TATCGGGAACCAGCTTCTTCACCTGAAAGAAACTGA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAGATGCAGAACTTGGTaGATGCACGGAGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLRCRTW*MHGVFI
Trigger: GATGAAGACTCCGTGCATTCACCAAGTTCTGCATCT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCACAGGTGCTTAGCTaGAGTAATGACTGGTTAACG +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSQVLS*SNDWLT
Trigger: CGTTAACCAGTCATTACTTCAGCTAAGCACCTGTGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCATGTTTGCGAGCTGTTaGAACTTTGCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLMFASC*NFASCC
Trigger: GCAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACAT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTGTTTCCAGACATGCTaGTGTTTGCGAGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCCFQTC*CLRAVE
Trigger: TTCAACAGCTCGCAAACATCAGCATGTCTGGAAACA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATTCAATCCAATTCCCTaGAGCTCACTGCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGFNPIP*SSLQRS
Trigger: GGAGCGCTGCAGTGAGCTTCAGGGAATTGGATTGAA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTTATGGAGGTCCTCGTaGAGCTCTGGAAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSLWRSS*SSGRGS
Trigger: AGATCCTCTTCCAGAGCTTCACGAGGACCTCCATAA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAGTTCTTTCAAGTTCTaGGTCCAGCTAGCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSSFKF*VQLAKD
Trigger: GTCTTTGGCTAGCTGGACTCAGAACTTGAAAGAACT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACCCTTGATCCGATaGCATCAAAAAGATGTTGCC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSPLIR*HQKDVA
Trigger: GGCAACATCTTTTTGATGTCATCGGATCAAGGGTGA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACCTTGCTGCTCACGTTaGCAGAGACCACTAATGCCT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPPCCSR*QRPLMP
Trigger: AGGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCACAGCAGCAGATTTTaGCTCAACTGGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEHSSRF*LNWWKS
Trigger: GGACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATGAGAAGGCACAGCAGCAGATTTTaGCTCAACTGGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: CTFSSASIQSSPCPLMRRHSSRF*LNWWKS
Trigger: GGACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTG...CCTTCTCATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGTGCCTATGAGTTTCTaGACCATTTCTAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSVPMSF*TISRVE
Trigger: TTCCACCCTAGAAATGGTTCAGAAACTCATAGGCAC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTATGGAGATCGTCGATaGCCCAGGAACCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIYGDRR*PRNPVH
Trigger: ATGAACAGGGTTCCTGGGGCATCGACGATCTCCATA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATTATGGAGATCGTCGATaGCCCAGGAACCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYYGDRR*PRNPVH
Trigger: ATGAACAGGGTTCCTGGGGCATCGACGATCTCCATA...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTCCCGAGGCAACTGTTaGCCAGAAAGTACTTCTAGC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKISRGNC*PESTSS
Trigger: GCTAGAAGTACTTTCTGGGCAACAGTTGCCTCGGGA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACAACAGATTTGGCTTCTaGCTCCCAGATTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: SSTWDSISAGTMVYISEYNRFGF*LPDFHL
Trigger: CAAGTGGAAATCTGGGAGGCAGAAGCCAAATCTGTT...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAGCTTCTTGAATCTTTaGCTGAAGCCCAGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSFLNL*LKPSCE
Trigger: CTCACAACTGGGCTTCAGGCAAAGATTCAAGAAGCT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCTGAATTTGTTGTTTTaGAGGTGGTGTTCAAGAATA +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDLNLLF*RWCSRI
Trigger: TATTCTTGAACACCACCTGCAAAACAACAAATTCAG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATTCTGTCAGTTTAGCCTaGAGACAAGAACTACTCCTG +
Preference number: 4 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYSVSLA*RQELLL
Trigger: CAGGAGTAGTTCTTGTCTGCAGGCTAAACTGACAGA...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGTATCTTCACTCCTCTaGACCCTGTGGTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLVSSLL*TLWFIP
Trigger: AGGAATGAACCACAGGGTGCAGAGGAGTGAAGATAC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTCCCATGTACGAAGCCTaGAGGGAGATGACACTCTCT +
Preference number: 4 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFPMYEA*REMTLS
Trigger: AGAGAGTGTCATCTCCCTGCAGGCTTCGTACATGGG...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATATCATACTGTGTTTTTaGTGTAGAATCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDIILCF*CRICCC
Trigger: ACAACAGCAGATTCTACAGCAAAAACACAGTATGAT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGTCTTCAAGCTCCTTTaGTCGAGCCTGGCATATGGA +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEVFKLL*SSLAYG
Trigger: TCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGAC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGTCTTCAAGCTCCTTTaGTCGAGCCTGGCATATGGA +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRVFKLL*SSLAYG
Trigger: TCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGAC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTAGTCTCAGTAGCTGCTaGAAGGAGTCTTCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKISLSSC*KESSSS
Trigger: GGAGCTTGAAGACTCCTTGCAGCAGCTACTGAGACT...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTGGAGTCTCAGTAGCTaGTGCAAGGAGTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSWSLSS*CKESSS
Trigger: GCTTGAAGACTCCTTGCAGCAGCTACTGAGACTCCA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATTGGAGTCTCAGTAGCTaGTGCAAGGAGTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYWSLSS*CKESSS
Trigger: GCTTGAAGACTCCTTGCAGCAGCTACTGAGACTCCA...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGATTCCACAGACTGCTaGCTAGCTAGAATGCCATCA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKDSTDC*LARMPS
Trigger: TGATGGCATTCTAGCTAGGCAGCAGTCTGTGGAATC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGAGTGATGCTCTCCACTaGCCTGGTGACTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESDALH*PGDCFF
Trigger: AAAGAAGCAGTCACCAGGGCAGTGGAGAGCATCACT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTTGACACCAAGGCCTTaGTCTGTTCCAAGCGCTCTA +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSLTPRP*SVPSAL
Trigger: TAGAGCGCTTGGAACAGAGCAAGGCCTTGGTGTCAA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGTCAGTAACAGCTGTTaGTTCTCCACGTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLVSNSC*FSTFSP
Trigger: TGGAGAGAACGTGGAGAAGCAACAGCTGTTACTGAC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACTGGGATTCAATCTCTaGAGGGACTATGGTGTACAT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLGFNL*RDYGVH
Trigger: ATGTACACCATAGTCCCTGCAGAGATTGAATCCCAG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACTATCCAAGCCTCAGTaGTCTTCAGAAGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLSKPQ*SSEGHY
Trigger: ATAGTGACCTTCTGAAGAGCACTGAGGCTTGGATAG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATGTTTCCGGCTCAACTaGCACGTTGGCTTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPCFRLN*HVGLLQ
Trigger: CTGCAACAAGCCAACGTGGCAGTTGAGCCGGAAACA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCCAGGCCCTGATCTTTaGAAGTCTCTAACAGAAAGG +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLPGPDL*KSLTER
Trigger: CCTTTCTGTTAGAGACTTGCAAAGATCAGGGCCTGG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAGTTCCACCATGCCTTaGAACAAAGCATCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSSTMP*NKASCW
Trigger: CCAGCAAGATGCTTTGTTGCAAGGCATGGTGGAACT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATGCTTGAGAAGAGCTTaGAGCCTGTGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGCLRRA*SLWSSW
Trigger: CCATGAGCTCCACAGGCTGCAAGCTCTTCTCAAGCA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGCAGAACTTGGTGAATaGACGGAGTCTTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSAELGE*TESSSE
Trigger: TTCAGATGAAGACTCCGTGCATTCACCAAGTTCTGC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCATCTTTAACATTTCCCTCCCCCAGGTGCTCTaGAAACTCCGTTCTTTCATA +
Preference number: 4 (lower is better)
Translates to: LSSISWISEGGFAIFNISLPQVL*KLRSFI
Trigger: TATGAAAGAACGGAGTTTGCAGAGCACCTGGGGGAG...GGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCCCAACTCCCTTCACTaGTCTCAGCTTCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRPNSLH*SQLHLA
Trigger: TGCAAGATGAAGCTGAGAGCAGTGAAGGGAGTTGGG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCCCAACTCCCTTCACTaGTCTCAGCTTCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEPNSLH*SQLHLA
Trigger: TGCAAGATGAAGCTGAGAGCAGTGAAGGGAGTTGGG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCTTCTGCAACTGGTCTaGAATGGCTTGGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKILLQLV*NGLVHL
Trigger: CAGGTGAACCAAGCCATTGCAGACCAGTTGCAGAAG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCTTCTGCAACTGGTCTaGAATGGCTTGGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELLQLV*NGLVHL
Trigger: CAGGTGAACCAAGCCATTGCAGACCAGTTGCAGAAG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGAGCTGTTGAAACTTTaGTTCCTGCTGCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKELLKL*FLLLQP
Trigger: AGGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATGGGGGCAGGATCTCTaGCAGGTTGTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKWGQDL*QVVSRH
Trigger: ATGTCTGGAAACAACCTGGCAGAGATCCTGCCCCCA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGTGGCCCGAATCCATTaGCGGTTCATATTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSVARIH*RFIFCN
Trigger: GTTACAAAATATGAACCGGCAATGGATTCGGGCCAC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGTGGCCCGAATCCATTaGCGGTTCATATTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCVARIH*RFIFCN
Trigger: GTTACAAAATATGAACCGGCAATGGATTCGGGCCAC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGTGAAATCTTGCCACTaGCTCACCAGCCCATCAACG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGVKSCH*LTSPST
Trigger: CGTTGATGGGCTGGTGAGGCAGTGGCAAGATTTCAC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCCTCCCATTGTCTGTaGAAATGCTCTATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSSHCL*KCSICS
Trigger: GGAGCAAATAGAGCATTTGCACAGACAATGGGAGGA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCCTCCCATTGTCTGTaGAAATGCTCTATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSSHCL*KCSICS
Trigger: GGAGCAAATAGAGCATTTGCACAGACAATGGGAGGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAACACTCGGTCTCATTTaGACAGGCATCGGAGTCGTG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGTLGLI*TGIGVV
Trigger: CACGACTCCGATGCCTGTGCAAATGAGACCGAGTGT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCGTCTAAAAACTTCTaGCACAGGCGCCACGTCTCC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSSKNF*HRRHVS
Trigger: GGAGACGTGGCGCCTGTGGCAGAAGTTTTTAGACGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCCATCTGCTTCAGCCTaGTGGCCGTGTCTGTGCGGT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNPSASA*WPCLCG
Trigger: ACCGCACAGACACGGCCAGCAGGCTGAAGCAGATGG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCACTCTCTGAGAAGTaGTCCACGTTGGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSLSEK*STLVSC
Trigger: GCAGCTGACCAACGTGGAGCACTTCTCAGAGAGTGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCGGGGCTCTCGGTTTaGAGAAATTCCTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSGLSV*RNSLLL
Trigger: GAGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATCGGGGCTCTCGGTTTaGAGAAATTCCTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGSGLSV*RNSLLL
Trigger: GAGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAATACCCGGGGCACCTaGCACACAGGTTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNNTRGT*HTGSLL
Trigger: GAGCAGGGAACCTGTGTGGCAGGTGCCCCGGGTATT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGAATGTCCTCGCTTaGTTCTATAATATATGTGAT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDWNVLA*FYNICD
Trigger: ATCACATATATTATAGAAGCAAGCGAGGACATTCCA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACCGGCAGCTCAAAATTaGCAGCTGATTGGAGTAAAA +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSPAAQN*QLIGVK
Trigger: TTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCCGGCAGCTCAAAATTaGCAGCTGATTGGAGTAAAA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCPAAQN*QLIGVK
Trigger: TTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTAGGGAGAAGTGTGCCTaGCCAACTGTGAGTTTATCC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRREKCA*PTVSLS
Trigger: GGATAAACTCACAGTTGGCCAGGCACACTTCTCCCT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCCCAGGGGCATCTTTaGAATACTGCAGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSQGHL*NTAETV
Trigger: CACAGTTTCTGCAGTATTCCAAAGATGCCCCTGGGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTGTTCTAGATTCCACTaGGCTAGTGTCTCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCCSRFH*ASVSKG
Trigger: ACCCTTTGAGACACTAGCCCAGTGGAATCTAGAACA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGAAGAGACTCCCATTTaGCACAGACATCTCTACTCT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCEETPI*HRHLYS
Trigger: AGAGTAGAGATGTCTGTGCCAAATGGGAGTCTCTTC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAATCTGGGTCTTGGCTTaGTCGAGATCCTCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIIWVLA*SRSSLS
Trigger: GCTAAGGGAGGATCTCGACCAAGCCAAGACCCAGAT...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTTCAGTCATCCCGATCTaGGTCTTGGCTTGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: SSHASVRCPPALFYCFFLSVIPI*VLAWSR
Trigger: TCTCGACCAAGCCAAGACCCAGATCGGGATGACTGA...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTTTTCTATGGTCATCCTaGAGTCTCAGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RMLLRQHSISCLADASLFFLWSS*SLSSCC
Trigger: GCAGCAGCTACTGAGACTCCAGGATGACCATAGAAA...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTAGTGTGTTGTCCCACTaGTTGCTGATGTCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSVLSH*LLMSVR
Trigger: CCTCACTGACATCAGCAACCAGTGGGACAACACACT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAAGGCAATCATGCTTTaGTTCCCTGCCCGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKKAIML*FPARSS
Trigger: AGAAGAACGGGCAGGGAACCAAAGCATGATTGCCTT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATACTTGGGTTTGTAATTaGTCAAGTTGTGAAAAATCC +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDTWVCN*SSCEKS
Trigger: GGATTTTTCACAACTTGACCAATTACAAACCCAAGT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAACTGAAGTTGTAGTTTaGCTTCGGGGCTGGATATCA +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSTEVVV*LRGWIS
Trigger: TGATATCCAGCCCCGAAGCCAAACTACAACTTCAGT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCGTGGCAACGAGGACATaGACTGTCCAAGAACTGTCT +
Preference number: 4 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSVATRT*TVQELS
Trigger: AGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCAC...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACTTCTCTGTAAGACAGTaGCAACGAGGACATGGACTG +
Preference number: 4 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHFSVRQ*QRGHGL
Trigger: CAGTCCATGTCCTCGTTGCCACTGTCTTACAGAGAA...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCCTGCATTCTTCCACCTaGGATTCAATCTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCLHSST*DSISAG
Trigger: CCCTGCAGAGATTGAATCCCAGGTGGAAGAATGCAG...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCTGTTAGCATAGCCTaGCACCCTACCAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSVSIA*HPTSCC
Trigger: ACAGCAGCTGGTAGGGTGCCAGGCTATGCTAACAGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCTGTTAGCATAGCCTaGCACCCTACCAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSVSIA*HPTSCC
Trigger: ACAGCAGCTGGTAGGGTGCCAGGCTATGCTAACAGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCAGGGCTGGATGCCTaGTTGCTTGCAGATGATTCC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSGLDA*LLADDS
Trigger: GGAATCATCTGCAAGCAACCAGGCATCCAGCCCTGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAGAGCTTGCAGCCTGTaGAGCTCATGGTCAATTTTC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLRACSL*SSWSIF
Trigger: GAAAATTGACCATGAGCTCCACAGGCTGCAAGCTCT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGCAACTGGTCTGCAATaGCTTGGTTCACCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGATGLQ*LGSPES
Trigger: GGACTCAGGTGAACCAAGCCATTGCAGACCAGTTGC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TTTGCACAGGCATCGGAGTCGTGCAGTAGGACGTCACAGATGTTAAACACGGACATCTTCTCCAAAAGTTaGATCCACTTTTCACAGCAA +
Preference number: 4 (lower is better)
Translates to: FAQASESCSRTSQMLNTDIFSKS*IHFSQQ
Trigger: TTGCTGTGAAAAGTGGATCCAACTTTTGGAGAAGAT...GTCCGTGTTTAACATCTGTGACGTCCTACTGCACGACTCCGATGCCTGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGAATCAGCAATTGTCTaGTTTATAGAAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDESAIV*FIETSA
Trigger: AGCTGAAGTTTCTATAAACCAGACAATTGCTGATTC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAACTGCAGATAGCAGGTaGCTGGTGTCAGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPTADSR*LVSVRK
Trigger: CTTCCTCACTGACACCAGCCACCTGCTATCTGCAGT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTTTGCCACCATCCGTGCCTGGAGGTAATAGTAGCTTTCCATAGGGTGGTTTATGTCTCTACAGTGCTCTaGAACTGCTTAATCATCTCT +
Preference number: 4 (lower is better)
Translates to: LCHHPCLEVIVAFHRVVYVSTVL*NCLIIS
Trigger: AGAGATGATTAAGCAGTTCCAGAGCACTGTAGAGAC...ATAAACCACCCTATGGAAAGCTACTATTACCTCCAGGCACGGATGGTGGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCTTCAGTTCCTCTTTaGCACTCGTGTACAACACCT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSSVPL*HSCTTP
Trigger: AGGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AATAACATGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATTCTGCTTCAGCCTGCTaGCCGTGTCTGTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: NNMHLFFSFNTVFSMSLNSASAC*PCLCGS
Trigger: AGAACCGCACAGACACGGCCAGCAGGCTGAAGCAGA...ATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCATGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACCAGAATGCTCTCCCTaGTGCCCTCAAATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKPECSP*CPQILP
Trigger: GGGAAGAATTTGAGGGCACCAGGGAGAGCATTCTGG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACCAGAATGCTCTCCCTaGTGCCCTCAAATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPPECSP*CPQILP
Trigger: GGGAAGAATTTGAGGGCACCAGGGAGAGCATTCTGG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCAGTCTGGATTTCTCTaGGGTCTTCCATGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCQSGFL*GLPCLF
Trigger: AAACAGACATGGAAGACCCCAGAGAAATCCAGACTG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCGCCAAGAATCAGTCTaGATTTCTCTGGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSRQESV*ISLGSS
Trigger: GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTACTTTGGAGCTCTGTaGATTCGGGGCTCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIYFGAL*IRGSRF
Trigger: AAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTACTTTGGAGCTCTGTaGATTCGGGGCTCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSYFGAL*IRGSRF
Trigger: AAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAACTGGTGGAAGTCCTaGCACTGCATGAGCGACTGT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPNWWKS*HCMSDC
Trigger: ACAGTCGCTCATGCAGTGCCAGGACTTCCACCAGTT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACCGGGCAAAGTTGTTaGCCTGAGTGCAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKTGQSC*PECSCS
Trigger: ACTACAGCTGCACTCAGGCCAACAACTTTGCCCGGT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACAGGTTCCCTGCTCCTaGGGAGGAACACAATCTGAA +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPQVPCS*GGTQSE
Trigger: TTCAGATTGTGTTCCTCCCCAGGAGCAGGGAACCTG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACATGCGGGTAGATTATaGGGCATCTCTGTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKHAGRL*GISVRF
Trigger: AAAACGGACAGAGATGCCCCATAATCTACCCGCATG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357395.7
3UTR CAA 72 bp CTCCCACATTGTTCAAGACATTCGGTGACCAAGGCTTaGGTATTCTCCCACAAGACTACTGTATTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: LPHCSRHSVTKA*VFSHKTTVFWH
Trigger: GTGCCAAAATACAGTAGTCTTGTGGGAGAATACCAAAGCCTTGGTCACCGAATGTCTTGAACAATGTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCAGTTTATCCAGCACGTaGAGGCTTTCTTCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSSLSST*RLSSGC
Trigger: ACACCCAGAAGAAAGCCTTCACGTGCTGGATAAACT...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGTTGTGAGAACATGTTaGAAGGACTCCTGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLVVRTC*KDSWLE
Trigger: TTCAAGCCAGGAGTCCTTTCAACATGTTCTCACAAC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTCTTCCATCTTCAGCCTaGTGTCCAAATCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: RMLLRQHSISCLADASLFLPSSA*CPNLVK
Trigger: TTTCACCAGATTTGGACATCAGGCTGAAGATGGAAG...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTGCCCCAGTAACTGCTaGGCCCTCATCATATATGAT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPECPSNC*ALIIYD
Trigger: ATCATATATGATGAGGGCTCAGCAGTTACTGGGGCA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCTGCCCCAGTAACTGCTaGGCCCTCATCATATATGAT +
Preference number: 4 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSCPSNC*ALIIYD
Trigger: ATCATATATGATGAGGGCTCAGCAGTTACTGGGGCA...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAAGGACTTCCATGTGGTaGTTAAGCTGGTACAGGCAG +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIRTSMW*LSWYRQ
Trigger: CTGCCTGTACCAGCTTAATCACCACATGGAAGTCCT...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCTCTTCACTTCTTGTTaGCTCTTCTGTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELFTSC*LFCEGS
Trigger: GCTGCCTTCACAGAAGAGTCAACAAGAAGTGAAGAG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCCTCTTCACTTCTTGTTaGCTCTTCTGTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCLFTSC*LFCEGS
Trigger: GCTGCCTTCACAGAAGAGTCAACAAGAAGTGAAGAG...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCTATTCTCAGATGTGGTaGTGGTCCCCTCGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSYSQMW*WSPRFS
Trigger: CGAAAAACGAGGGGACCATCACCACATCTGAGAATA...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAATTTGTTTTCCTCAGTaGATTCCTCCTGTACCCCAT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSICFPQ*IPPVPH
Trigger: ATGGGGTACAGGAGGAATTCACTGAGGAAAACAAAT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAATTCCATTTCTCTTCTTaGTTAGTCAACCACTTCCTC +
Preference number: 4 (lower is better)
Translates to: LPWQLSPPWELSVFHFLEFHFSS*LVNHFL
Trigger: GAGGAAGTGGTTGACTAATCAAGAAGAGAAATGGAA...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCCATTTTGCCTTCGGATaGATTCAAAACCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCHFAFG*IQNHKG
Trigger: TCCCTTATGGTTTTGAATTCATCCGAAGGCAAAATG...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTCATGTTCTCGAACGTaGCCGTCCAAGTTTTGCACA +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSCSRT*PSKFCT
Trigger: TGTGCAAAACTTGGACGGTCACGTTCGAGAACATGA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGACGCAAACCTGGTATaGATCATGTTCTCGAACGTG +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSDANLV*IMFSNV
Trigger: CACGTTCGAGAACATGATTCATACCAGGTTTGCGTC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAATGCCATCTTGTAAACTaGGTCTATTCTCTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LPWQLSPPWELSVFHFLECHLVN*VYSLVP
Trigger: AGGAACTAGAGAATAGACTCAGTTTACAAGATGGCA...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CTTTCGTGTAGATGCTTTATTTCCAGCCAAGGCTCTTCACTGAAGCTGGGATTTGCAGCAAGGTATTCCTaGAAATCTCTGAGGACACAA +
Preference number: 4 (lower is better)
Translates to: LSCRCFISSQGSSLKLGFAARYS*KSLRTQ
Trigger: TTGTGTCCTCAGAGATTTTCAGGAATACCTTGCTGC...AAATCCCAGCTTCAGTGAAGAGCCTTGGCTGGAAATAAAGCATCTACACGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTTAAAATTTGGGCATTaGGCCGTCTGCTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELKFGH*AVCFPE
Trigger: CTCCGGAAAGCAGACGGCTCAATGCCCAAATTTTAA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGCCCAAACTTGCTCCTaGAATGCTTCACAATTGTCC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRAQTCS*NASQLS
Trigger: GGACAATTGTGAAGCATTTCAGGAGCAAGTTTGGGC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGCCCAAACTTGCTCCTaGAATGCTTCACAATTGTCC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEAQTCS*NASQLS
Trigger: GGACAATTGTGAAGCATTTCAGGAGCAAGTTTGGGC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAATCCTGTAAAGTATACTaGAGTTGTAGTTTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: LPWQLSPPWELSVFHFLESCKVY*SCSLAS
Trigger: CGAAGCCAAACTACAACTTCAGTATACTTTACAGGA...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAATACTTCTGATGCGCTaGAGAAGTAGAGTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSILLMR*RSRVSN
Trigger: GTTACTGACTCTACTTCTTCAGCGCATCAGAAGTAT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTTTCGTGTAGATGCTTTATTTCCAGCCAAGGCTCTTCACTGAAGCTGGGATTTCATTCTGGATACTTCTaGTGCGCTGAAGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LSCRCFISSQGSSLKLGFHSGYF*CAEEVE
Trigger: CTCTACTTCTTCAGCGCATCAGAAGTATCCAGAATG...AAATCCCAGCTTCAGTGAAGAGCCTTGGCTGGAAATAAAGCATCTACACGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTCTCCTCAAATTGTTCTaGCTTTTCTGGGTGATCCTG +
Preference number: 4 (lower is better)
Translates to: RMLLRQHSISCLADASLFLLKLF*LFWVIL
Trigger: CAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAG...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATACACTCTGCTCTCTGTaGTACTTGCTGATACTGCTG +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYTLCSL*YLLILL
Trigger: CAGCAGTATCAGCAAGTATCACAGAGAGCAGAGTGT...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAGAGTTCCTCTGTGGTGGCTGCCTCTTTTGTTTTGGAAATTTCAGGGAGTTCGGATTGGCCAGCAAATaGCTGGTATTTTCTATCCAA +
Preference number: 4 (lower is better)
Translates to: REFLCGGCLFCFGNFREFGLASK*LVFSIQ
Trigger: TTGGATAGAAAATACCAGTCATTTGCTGGCCAATCC...GAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACAGTGCTAGCATGGTaGCTCAGTGTCCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKTVLAW*LSVLKE
Trigger: CTCTTTGAGGACACTGAGTCACCATGCTAGCACTGT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAACAGTGCTAGCATGGTaGCTCAGTGTCCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWITVLAW*LSVLKE
Trigger: CTCTTTGAGGACACTGAGTCACCATGCTAGCACTGT...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCATCAGCCATTCGCTaGATCTGTGGAAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSSAIR*ICGRLS
Trigger: GGAAAGCCTTCCACAGATTCAGCGAATGGCTGATGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGTCAGCTTGGTCTGGTaGCATATGTTCAAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSVSLVW*HMFKGE
Trigger: TTCTCCCTTGAACATATGTCACCAGACCAAGCTGAC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTAGTCCTGAGACACATTaGGGGACTGTTCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSPETH*GTVLSS
Trigger: ACTGGAAAGAACAGTCCCTCAATGTGTCTCAGGACT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTCAGTTTCTTTCAGGTaGAGAAGCTGGTTCCCGATA +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSVSFR*RSWFPI
Trigger: TATCGGGAACCAGCTTCTTCACCTGAAAGAAACTGA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACACGGAGTCTTCATCTaGAGTTTGATGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKHGVFI*SLMLHI
Trigger: AATGTGGAGCATCAAACTTCAGATGAAGACTCCGTG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGAGCAGCTTCTGCACTaGGATCACACTTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKREQLLH*DHTFRF
Trigger: AAACCTGAAAGTGTGATCTCAGTGCAGAAGCTGCTC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATGAGAAGGGAGCAGCTTCTGCACTaGGATCACACTTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: CTFSSASIQSSPCPLMRREQLLH*DHTFRF
Trigger: AAACCTGAAAGTGTGATCTCAGTGCAGAAGCTGCTC...CCTTCTCATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTGTTTCCAGACATGCTaGTGTTTGCGAGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLCFQTC*CLRAVE
Trigger: TTCAACAGCTCGCAAACATCAGCATGTCTGGAAACA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTCTTTTTCCTGTTGGTaGAGTCTATCCAAATTCTCT +
Preference number: 4 (lower is better)
Translates to: SGFPARPLNLGTLAPVTVSFSCW*SLSKFS
Trigger: AGAGAATTTGGATAGACTTCACCAACAGGAAAAAGA...AACAGTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGTTGTAAGGACTGGGTaGCATAGGAATCAGCAATTG +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKVVRTG*HRNQQL
Trigger: CAATTGCTGATTCCTATGTCACCCAGTCCTTACAAC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTGTCCTGAAGTTGACTaGTTCTCCTACCCACAGACT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKICPEVD*FSYPQT
Trigger: AGTCTGTGGGTAGGAGAATCAGTCAACTTCAGGACA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATTATGGAGGTCCTCGTaGAGCTCTGGAAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGLWRSS*SSGRGS
Trigger: AGATCCTCTTCCAGAGCTTCACGAGGACCTCCATAA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAGTTCTTTCAAGTTCTaGGTCCAGCTAGCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSSFKF*VQLAKD
Trigger: GTCTTTGGCTAGCTGGACTCAGAACTTGAAAGAACT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGATCTCAGCTGCTCTTaGTTTGTTGCTGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSDLSCS*FVAGLD
Trigger: ATCAAGGCCAGCAACAAATCAAGAGCAGCTGAGATC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACAATCGGCGTCACTCTCTaGGAAGTGCTCCACGTTGGT +
Preference number: 4 (lower is better)
Translates to: IKSWDTCSRNCLSFFSITIGVTL*EVLHVG
Trigger: ACCAACGTGGAGCACTTCTCAGAGAGTGACGCCGAT...TGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCGAAATGGATTTACCTaGCAGTGCGCTGTAGTATGG +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIRNGFT*QCAVVW
Trigger: CCATACTACAGCGCACTGTCAGGTAAATCCATTTCG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGAAGCTCAGGACTAGATaGCATTCTTTGACTCAATGG +
Preference number: 4 (lower is better)
Translates to: SREFSCSERRQKVFQSFEKLRTR*HSLTQW
Trigger: CCATTGAGTCAAAGAATGGCATCTAGTCCTGAGCTT...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAACTGAGGGAGAAGTGTaGCTGGCCAACTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWITEGEV*LANCEF
Trigger: AAACTCACAGTTGGCCAGGCACACTTCTCCCTCAGT...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATATACTGCAGAAACTGTaGCACATAGGTCATGATGGA +
Preference number: 4 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYILQKL*HIGHDG
Trigger: TCCATCATGACCTATGTGGCACAGTTTCTGCAGTAT...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGAGGACTCCATGACCTaGAATTCAAGAGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCEDSMT*NSRGIS
Trigger: TGAAATACCTCTTGAATTGCAGGTCATGGAGTCCTC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTAGATGCTTCTTCACATaGTTCAGTACGCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCRCFFT*FSTLST
Trigger: GGTGGACAGCGTACTGAAGCATGTGAAGAAGCATCT...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGTCTTCAAGCTCCTTTaGTCGAGCCTGGCATATGGA +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKVFKLL*SSLAYG
Trigger: TCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGAC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTGTCTTCAAGCTCCTTTaGTCGAGCCTGGCATATGGA +
Preference number: 4 (lower is better)
Translates to: SSHASVRCPPALFYCFFLVFKLL*SSLAYG
Trigger: TCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGAC...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCCCTCAAGTGGCATTTTaGCTTCGGATGAATTCAAAA +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCPQVAF*LRMNSK
Trigger: TTTTGAATTCATCCGAAGGCAAAATGCCACTTGAGG...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATTCGCTGCTCTCAGCCTaGTTCATGATGGTCTCTATT +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYSLLSA*FMMVSI
Trigger: AATAGAGACCATCATGAAGCAGGCTGAGAGCAGCGA...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAAGTTCCTGCAGTTTCTaGAATTTTTCCTCAACCGCT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSSCSF*NFSSTA
Trigger: AGCGGTTGAGGAAAAATTGCAGAAACTGCAGGAACT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACCTCCTGCTTAGCAGATaGAAGCCTGTTTTCCAAATC +
Preference number: 4 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHLLLSR*KPVFQI
Trigger: GATTTGGAAAACAGGCTTGCATCTGCTAAGCAGGAG...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTGTTGCTGCTGCTGTTaGAGAGAAATCTCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRCCCCC*REISVS
Trigger: GGACACTGAGATTTCTCTGCAACAGCAGCAGCAACA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTTGTTGCTGCTGCTGTTaGAGAGAAATCTCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCCCCCC*REISVS
Trigger: GGACACTGAGATTTCTCTGCAACAGCAGCAGCAACA...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGTGTAGATGTTGCTGCTaGTGTTGCAGAGAAATCTCA +
Preference number: 4 (lower is better)
Translates to: SREFSCSERRQKVFQSFECRCCC*CCREIS
Trigger: TGAGATTTCTCTGCAACAGCAGCAGCAACATCTACA...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAACTGTAGATGTTGCTaGTGCTGTTGCAGAGAAATC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCNCRCC*CCCREI
Trigger: GATTTCTCTGCAACAGCAGCAGCAACATCTACAGTT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACCTTAACTGTAGATGTTaGTGCTGCTGTTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: SSTWDSISAGTMVYISEYLNCRC*CCCCRE
Trigger: TTCTCTGCAACAGCAGCAGCAACATCTACAGTTAAG...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACATGCTTTGGTTCCCTaGCCGTTCTTCTGGAGACTT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKHALVP*PFFWRL
Trigger: AAGTCTCCAGAAGAACGGGCAGGGAACCAAAGCATG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCAACGATTCCACAGACTaGTGCCTAGCTAGAATGCCA +
Preference number: 4 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCNDSTD*CLARMP
Trigger: TGGCATTCTAGCTAGGCAGCAGTCTGTGGAATCGTT...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACCAATTCCTTCTGAGATaGCTCCAAAGTAACATGGTG +
Preference number: 4 (lower is better)
Translates to: SSTWDSISAGTMVYISEYQFLLR*LQSNMV
Trigger: CACCATGTTACTTTGGAGGCATCTCAGAAGGAATTG...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATGAGGTCCTGGATGTGTaGTACTGTGGATTCCAATTC +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYEVLDV*YCGFQF
Trigger: GAATTGGAATCCACAGTAGCACACATCCAGGACCTC...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTGCCTCAGTTTCCTGTaGTTTGAAAGCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCCLSFL*FESFLH
Trigger: ATGAAGGAAGCTTTCAAAGCACAGGAAACTGAGGCA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCACAAATTTCCATTCCTaGTTCAGTTCTTCGCACCAC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCTNFHS*FSSSHH
Trigger: GTGGTGCGAAGAACTGAAGCAGGAATGGAAATTTGT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATACAAATTTCCATTCCTaGTTCAGTTCTTCGCACCAC +
Preference number: 4 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYTNFHS*FSSSHH
Trigger: GTGGTGCGAAGAACTGAAGCAGGAATGGAAATTTGT...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCTGGGATTCAATCTCTaGAGGGACTATGGTGTACAT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLLGFNL*RDYGVH
Trigger: ATGTACACCATAGTCCCTGCAGAGATTGAATCCCAG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAACTTCTAAAGCTTTTCTaGATTCTTCCACCTGGGATT +
Preference number: 4 (lower is better)
Translates to: LPWQLSPPWELSVFHFLELLKLF*ILPPGI
Trigger: AATCCCAGGTGGAAGAATGCAGAAAAGCTTTAGAAG...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACTGAGGCGATGGCTCTaGCTTCTCATCTCCATTATC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGLRRWL*LLISII
Trigger: GATAATGGAGATGAGAAGGCAGAGCCATCGCCTCAG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTGGTGTGAGGATTTGTaGCATGGAATTATCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCWCEDL*HGIIRG
Trigger: ACCTCTGATAATTCCATGGCACAAATCCTCACACCA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGAACATTCTGGGCCTTaGTCAGTGTTTAGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKEHSGP*SVFSES
Trigger: AGACTCACTAAACACTGAGCAAGGCCCAGAATGTTC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGAACATTCTGGGCCTTaGTCAGTGTTTAGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLEHSGP*SVFSES
Trigger: AGACTCACTAAACACTGAGCAAGGCCCAGAATGTTC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTGTTCCAGCACCTGCTaGATGTCTGCGTTTAATGTT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLCSSTC*MSAFNV
Trigger: AACATTAAACGCAGACATGCAGCAGGTGCTGGAACA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTGCTGTTCCAGCACCTaGTGCATGTCTGCGTTTAAT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRCCSST*CMSAFN
Trigger: ATTAAACGCAGACATGCAGCAGGTGCTGGAACAGCA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTGCTGTTCCAGCACCTaGTGCATGTCTGCGTTTAAT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSCCSST*CMSAFN
Trigger: ATTAAACGCAGACATGCAGCAGGTGCTGGAACAGCA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTGTCTGAAGGTTACTTaGTTCTTGGCGCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSCLKVT*FLAQVF
Trigger: GAAGACCTGCGCCAAGAAGCAAGTAACCTTCAGACA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACAGCTTTCAGGGACTTaGTTCTACAGACAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKQLSGT*FYRQLQ
Trigger: CTGCAGCTGTCTGTAGAAGCAAGTCCCTGAAAGCTG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTTCAGGGACAACCACTaGTCTTCCAGTTTTGCGATC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIFRDNH*SSSFAI
Trigger: GATCGCAAAACTGGAAGAGCAGTGGTTGTCCCTGAA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATTCTTTCATAGCGCTTaGTTTCTACATCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSFFHSA*FLHHRC
Trigger: GCACCTGTGATGTAGAAAGCAAGCGCTATGAAAGAA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTATAACACCACAGGCTTaGTGTGTTCCATGCAGTACC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIITPQA*CVPCST
Trigger: GGTACTGCATGGAACACAGCAAGCCTGTGGTGTTAT...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTATAACACCACAGGCTTaGTGTGTTCCATGCAGTACC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSITPQA*CVPCST
Trigger: GGTACTGCATGGAACACAGCAAGCCTGTGGTGTTAT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTTCTGCACATCATGCTaGAGCTCCTTTATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSFCTSC*SSFMSC
Trigger: GCAGGACATAAAGGAGCTGCAGCATGATGTGCAGAA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGCTTCTTTTGTTTTCTaGACATCATGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKASFVF*TSCCSS
Trigger: GGAGCTGCAGCATGATGTGCAGAAAACAAAAGAAGC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTACAGTGCTCTGGAACTaGTTAATCATCTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSTVLWN*LIISAS
Trigger: GCTGGCAGAGATGATTAAGCAGTTCCAGAGCACTGT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTTCGAGCCAACCAGGTaGGAAGGTTGCTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEFEPTR*EGCSCF
Trigger: AAAACATGAGCAACCTTCGCACCTGGTTGGCTCGAA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGCTGTAGATCCTGCTaGTCAGCGAGCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNRCRSC*SASLFW
Trigger: CCAGAAGAGGCTCGCTGAGCAGCAGGATCTACAGCG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCGAAGGCACCTGACTaGTGCTCTGTGATACCGGCC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSKAPD*CSVIPA
Trigger: GGCCGGTATCACAGAGCAGCAGTCAGGTGCCTTCGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAGCTCCTTTTCCAGTTaGATTAGTTCCCTCCGACAC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSSSFSS*ISSLRH
Trigger: GTGTCGGAGGGAACTAATGCAACTGGAAAAGGAGCT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACAGCTCCACTGTATATaGATCTGCTTTCTGGTAACT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSQLHCI*ICFLVT
Trigger: AGTTACCAGAAAGCAGATGCATATACAGTGGAGCTG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGCTTGCAATGAAATATaGAGATCGTCGATGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEACNEI*RSSMPQ
Trigger: CTGGGGCATCGACGATCTCCATATTTCATTGCAAGC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTGCTTGCAATGAAATATaGAGATCGTCGATGCCCCAG +
Preference number: 4 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCACNEI*RSSMPQ
Trigger: CTGGGGCATCGACGATCTCCATATTTCATTGCAAGC...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGTGAAGGCTTTCTTCTaGGTGTCTTCCTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRVKAFF*VSSCSA
Trigger: AGCTGAACAGGAAGACACCCAGAAGAAAGCCTTCAC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGTGAAGGCTTTCTTCTaGGTGTCTTCCTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEVKAFF*VSSCSA
Trigger: AGCTGAACAGGAAGACACCCAGAAGAAAGCCTTCAC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGTCTCTGGTTCCAGCAATCTaGGGATTTTTAATTCTTGTT +
Preference number: 4 (lower is better)
Translates to: FLRFLWSSWSLSSCCKESLVPAI*GFLILV
Trigger: AACAAGAATTAAAAATCCCCAGATTGCTGGAACCAG...AGACTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTGTTCTAGATTCCACTaGGCTAGTGTCTCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLCSRFH*ASVSKG
Trigger: ACCCTTTGAGACACTAGCCCAGTGGAATCTAGAACA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGATCCAAAACAGATTTaGCTTCTGCCTCCCAGATTT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSDPKQI*LLPPRF
Trigger: AAATCTGGGAGGCAGAAGCCAAATCTGTTTTGGATC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGAAGAGACTCCCATTTaGCACAGACATCTCTACTCT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKEETPI*HRHLYS
Trigger: AGAGTAGAGATGTCTGTGCCAAATGGGAGTCTCTTC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTGAAGAGACTCCCATTTaGCACAGACATCTCTACTCT +
Preference number: 4 (lower is better)
Translates to: RMLLRQHSISCLADASLFEETPI*HRHLYS
Trigger: AGAGTAGAGATGTCTGTGCCAAATGGGAGTCTCTTC...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGATGAAATCCCTGGATaGCCATTTTATGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKDEIPG*PFYGEA
Trigger: TGCCTCTCCATAAAATGGCCATCCAGGGATTTCATC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTCCGATGTTTCACAGCTaGAACAGTAGGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: RMLLRQHSISCLADASLFPMFHS*NSRILK
Trigger: CTTAAGGATCCTACTGTTCCAGCTGTGAAACATCGG...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAGTGTGTTGTCCCACTaGTTGCTGATGTCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGSVLSH*LLMSVR
Trigger: CCTCACTGACATCAGCAACCAGTGGGACAACACACT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGAGTTCCTCTGTGGTGGCTGCCTCTTTTGTTTTGGAAATTTCAGGGAGTTCTCTGTGACGCAAACCTaGTATGAATCATGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: REFLCGGCLFCFGNFREFSVTQT*YESCSR
Trigger: TCGAGAACATGATTCATACCAGGTTTGCGTCACAGA...GAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACCGTTACACTGTCCAGTaGTCCTACTTTAAGACTTTC +
Preference number: 4 (lower is better)
Translates to: SSTWDSISAGTMVYISEYRYTVQ*SYFKTF
Trigger: GAAAGTCTTAAAGTAGGACCACTGGACAGTGTAACG...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGTGGCAACGAGGACATaGACTGTCCAAGAACTGTCT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGVATRT*TVQELS
Trigger: AGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCAC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTTCTCTGTAAGACAGTaGCAACGAGGACATGGACTG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRFSVRQ*QRGHGL
Trigger: CAGTCCATGTCCTCGTTGCCACTGTCTTACAGAGAA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTAGAGTTCCTCTGTGGTaGCTGCCTCTTTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRRVPLW*LPLLFW
Trigger: CCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAACGTTCTCTCCATATTaGCATAAACAGTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSTFSPY*HKQSSS
Trigger: GCTGCTAGACTGTTTATGCCAATATGGAGAGAACGT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCTCTGCAGGGACTATaGTGTACATTTCGGAATACT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSLQGL*CTFRNT
Trigger: AGTATTCCGAAATGTACACCATAGTCCCTGCAGAGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACTGCATTCTTCCACCTaGGATTCAATCTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPLHSST*DSISAG
Trigger: CCCTGCAGAGATTGAATCCCAGGTGGAAGAATGCAG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACTGCATTCTTCCACCTaGGATTCAATCTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGLHSST*DSISAG
Trigger: CCCTGCAGAGATTGAATCCCAGGTGGAAGAATGCAG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACATAGTCAGCAGGATTaGCCAGCAAATGACTGGTAT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKHSQQD*PANDWY
Trigger: ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGGTTTCATTCCTGTTTaGGGCAACCTCAGTTCCACT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRGFIPV*GNLSST
Trigger: AGTGGAACTGAGGTTGCCCCAAACAGGAATGAAACC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGAAGGTTTAGTACGGTaGCCTTCAAGTCCACCAACA +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSEGLVR*PSSPPT
Trigger: TGTTGGTGGACTTGAAGGCCACCGTACTAAACCTTC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATCTCCATTTTGGCCCTaGGGTGACAAGATCGAGTCT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGSPFWP*GDKIES
Trigger: AGACTCGATCTTGTCACCCCAGGGCCAAAATGGAGA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCACTTATCTCCATTTTaGCCCTGGGGTGACAAGATC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEHLSPF*PWGDKI
Trigger: GATCTTGTCACCCCAGGGCCAAAATGGAGATAAGTG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAACAAAGCATCTTGCTaGCTCTCAGTGACGAAAGGG +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSNKASC*LSVTKG
Trigger: CCCTTTCGTCACTGAGAGCCAGCAAGATGCTTTGTT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATTGCCGATAACCTCCTaGAGTTTCTCCCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGLPITS*SFSQLP
Trigger: AGGGAGTTGGGAGAAACTCCAGGAGGTTATCGGCAA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAGCTACGTCACTAAGTaGGAGCTTGAGGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSYVTK*ELEAHF
Trigger: GAAGTGAGCCTCAAGCTCCCACTTAGTGACGTAGCT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAAGCTACGTCACTAAGTaGGAGCTTGAGGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSYVTK*ELEAHF
Trigger: GAAGTGAGCCTCAAGCTCCCACTTAGTGACGTAGCT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCATCTTTAACATTTCCGTCCTCGTGAAGCTCTaGAAGAGGATCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: LSSISWISEGGFAIFNISVLVKL*KRIFTL
Trigger: CAAAGTGAAGATCCTCTTCCAGAGCTTCACGAGGAC...GGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp CTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCATCTTTAACATTTCCTCTCCTGTTTACGTATaGCCACCCTTAAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LSSISWISEGGFAIFNISSPVYV*PPLSRG
Trigger: ACCTCTGCTTAAGGGTGGCCATACGTAAACAGGAGA...GGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCTGGCCTTGATCAACTaGTCACCCATCTGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSLALIN*SPICFN
Trigger: GTTAAAGCAGATGGGTGACCAGTTGATCAAGGCCAG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCTCCTGGTGGTCTGCTaGATCGAGTCACACTCGGTC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNLLVVC*IESHSV
Trigger: GACCGAGTGTGACTCGATCCAGCAGACCACCAGGAG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACAGTCTGGATTTCTCTaGGGTCTTCCATGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKQSGFL*GLPCLF
Trigger: AAACAGACATGGAAGACCCCAGAGAAATCCAGACTG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACGCCAAGAATCAGTCTaGATTTCTCTGGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGRQESV*ISLGSS
Trigger: GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGCTGTTTGAAATCTCCTGTAACATGTCCACTTGAGGTTGACGTTCTACCAGCTCTCAGTTCTATTTCCTaGATATCAGAGGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GCLKSPVTCPLEVDVLPALSSIS*ISEGGF
Trigger: AAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG...AGCTGGTAGAACGTCAACCTCAAGTGGACATGTTACAGGAGATTTCAAACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCCGGGGGTCTGCCTTTaGATCGGTGACATGAGCCTT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNPGVCL*IGDMSL
Trigger: AAGGCTCATGTCACCGATCCAAAGGCAGACCCCCGG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAAGGCCATTAAATCTTaGGACACTTGCTCCCGTAAC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKKAIKS*DTCSRN
Trigger: GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGCTATGCCCTCTATGTaGGGGGTGGCCCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNAMPSM*GVAHWC
Trigger: ACACCAATGGGCCACCCCCCACATAGAGGGCATAGC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCTGAACAGAACATTTTaGTGTATAACCGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCLNRTF*CITGSS
Trigger: TGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAAGACTTACATAGGGTaGTTTATAAGGGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCKTYIG*FIRGAG
Trigger: TCCAGCACCCCTTATAAACCACCCTATGTAAGTCTT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACTGTTCAGCTTGCAATaGAATATGGAGATCGTCGAT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKLFSLQ*NMEIVD
Trigger: ATCGACGATCTCCATATTTCATTGCAAGCTGAACAG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGTGCCACATAGGTCATaGTGGACTTTTCATCAGGAT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIVPHRS*WTFHQD
Trigger: ATCCTGATGAAAAGTCCATCATGACCTATGTGGCAC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTTTCGTGTAGATGCTTTATTTCCAGCCAAGGCTCTTCACTGAAGCTGGGATTTCAGATCCCGTTTTATTaGCAGGACATCCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LSCRCFISSQGSSLKLGFQIPFY*QDIQKG
Trigger: TCCTTTTTGGATGTCCTGTCAATAAAACGGGATCTG...AAATCCCAGCTTCAGTGAAGAGCCTTGGCTGGAAATAAAGCATCTACACGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGTGATCCTGGGAGGCTaGCAAATCTTCATCCATAAG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPVILGG*QIFIHK
Trigger: CTTATGGATGAAGATTTGTCAGCCTCCCAGGATCAC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCGGTACCAATGGCAAGTaGTTTTCATCCTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCGTNGK*FSSLFS
Trigger: TGAAAATAAGGATGAAAATCACTTGCCATTGGTACC...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGCAACCACATCATTGCTaGCTTCGACTAAGAAATTTC +
Preference number: 4 (lower is better)
Translates to: SREFSCSERRQKVFQSFEQPHHC*LRLRNF
Trigger: GAAATTTCTTAGTCGAAGTCAGCAATGATGTGGTTG...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCTTCCATCTTCAGCCTaGTGTCCAAATCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRLPSSA*CPNLVK
Trigger: TTTCACCAGATTTGGACATCAGGCTGAAGATGGAAG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAGCCCTCATCATATATaGTTCAAGTTCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSPHHI*FKFLLG
Trigger: TCCCAGAAGGAACTTGAATCATATATGATGAGGGCT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATGCCCCAGTAACTGCTaGGCCCTCATCATATATGAT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGCPSNC*ALIIYD
Trigger: ATCATATATGATGAGGGCTCAGCAGTTACTGGGGCA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGGCTGCAGTGTCATATaGATCTCGGAAGCACATTTC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGGCSVI*ISEAHF
Trigger: GAAATGTGCTTCCGAGATTCATATGACACTGCAGCC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGGCTGCAGTGTCATATaGATCTCGGAAGCACATTTC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKGCSVI*ISEAHF
Trigger: GAAATGTGCTTCCGAGATTCATATGACACTGCAGCC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCATTTGTTTTCCTCAGTaGATTCCTCCTGTACCCCAT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLICFPQ*IPPVPH
Trigger: ATGGGGTACAGGAGGAATTCACTGAGGAAAACAAAT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGTTCAAGACATTCGGTaGCCAAGGCTTTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSVQDIR*PRLWYS
Trigger: AGAATACCAAAGCCTTGGTCACCGAATGTCTTGAAC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTCTAATTCGAATTCCTaGCCCACGAGCCAACTGATA +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKISNSNS*PTSQLI
Trigger: TATCAGTTGGCTCGTGGGTCAGGAATTCGAATTAGA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATTCCATTTCTCTTCTTaGTTAGTCAACCACTTCCTC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSFHFSS*LVNHFL
Trigger: GAGGAAGTGGTTGACTAATCAAGAAGAGAAATGGAA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGAATCCTGCAGTTGTTaGAGAAGACTTTCGTGTAGA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKESCSC*RRLSCR
Trigger: TCTACACGAAAGTCTTCTTCAACAACTGCAGGATTC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCATGTTCTCGAACGTaGCCGTCCAAGTTTTGCACA +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSCSRT*PSKFCT
Trigger: TGTGCAAAACTTGGACGGTCACGTTCGAGAACATGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTAATCTTCTGCCCCACTaGAGATGTATTTTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: RMLLRQHSISCLADASLFNLLPH*RCILLD
Trigger: GTCAAGCAAAATACATCTTCAGTGGGGCAGAAGATT...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGATTTTGCAGCTCATTaGCTTTCCGCTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEDFAAH*LSAHLQ
Trigger: CTGAAGATGAGCGGAAAGTCAATGAGCTGCAAAATC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGATTTTGCAGCTCATTaGCTTTCCGCTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSDFAAH*LSAHLQ
Trigger: CTGAAGATGAGCGGAAAGTCAATGAGCTGCAAAATC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATGATTTTGCAGCTCATTaGCTTTCCGCTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYDFAAH*LSAHLQ
Trigger: CTGAAGATGAGCGGAAAGTCAATGAGCTGCAAAATC...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCAAAGTAATAAGTGCCTaGAGCAAATTGTCCAAATGC +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCKVISA*SKLSKC
Trigger: GCATTTGGACAATTTGCTTCAGGCACTTATTACTTT...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGCAGCAAGGTATTCCTaGAAATCTCTGAGGACACAA +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEAARYS*KSLRTQ
Trigger: TTGTGTCCTCAGAGATTTTCAGGAATACCTTGCTGC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACTCCAAAGTAACATGGTaGTGTTTTAGTTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SSTWDSISAGTMVYISEYSKVTW*CFSSAS
Trigger: GGAAGCTGAACTAAAACATCACCATGTTACTTTGGA...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATTAAAATTTGGGCATTaGGCCGTCTGCTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKLKFGH*AVCFPE
Trigger: CTCCGGAAAGCAGACGGCTCAATGCCCAAATTTTAA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGCCCAAACTTGCTCCTaGAATGCTTCACAATTGTCC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKAQTCS*NASQLS
Trigger: GGACAATTGTGAAGCATTTCAGGAGCAAGTTTGGGC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCCTGTAAAGTATACTaGAGTTGTAGTTTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSCKVY*SCSLAS
Trigger: CGAAGCCAAACTACAACTTCAGTATACTTTACAGGA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGAGCCGACACAATCTTaGGCAAACATATGCCATCAT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIEPTQS*ANICHH
Trigger: ATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCATACTTCTGATGCGCTaGAGAAGTAGAGTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLILLMR*RSRVSN
Trigger: GTTACTGACTCTACTTCTTCAGCGCATCAGAAGTAT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCTCCTCAAATTGTTCTaGCTTTTCTGGGTGATCCTG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRLLKLF*LFWVIL
Trigger: CAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCCTCTGTGATACTTGCTaGTACTGCTGGAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCLCDTC*YCWKGI
Trigger: GATTCCTTTCCAGCAGTATCAGCAAGTATCACAGAG...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGGCCTTATTCAACTGTaGGGTTCTACACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPGLIQL*GSTLCS
Trigger: AGAGCAGAGTGTAGAACCTCACAGTTGAATAAGGCC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCACTCCACCTTCCTCTaGTGTTACAGCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNHSTFL*CYSWQP
Trigger: AGGCTGCCAGCTGTAACATCAGAGGAAGGTGGAGTG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAATTGTTCCAGAGGATaGGGAAGCTCTGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSNCSRG*GSSVFF
Trigger: GAAGAAGACAGAGCTTCCTCATCCTCTGGAACAATT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTCACTGTGCTTCTCCTaGAGCATCATCTGGACTTTT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESLCFS*SIIWTF
Trigger: AAAAGTCCAGATGATGCTTCAGGAGAAGCACAGTGA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTGTTTTAAGTGGCCATaGGCAAGCTTTTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPECFKWP*ASFSFP
Trigger: TGGGAAGGAAAAGCTTGCTCATGGCCACTTAAAACA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTGTTTTAAGTGGCCATaGGCAAGCTTTTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSCFKWP*ASFSFP
Trigger: TGGGAAGGAAAAGCTTGCTCATGGCCACTTAAAACA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTATTGTATCCAAGTCCTaGGACACATTGAGGGACTGT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRIVSKS*DTLRDC
Trigger: ACAGTCCCTCAATGTGTCTCAGGACTTGGATACAAT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTCAGTTTCTTTCAGGTaGAGAAGCTGGTTCCCGATA +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSVSFR*RSWFPI
Trigger: TATCGGGAACCAGCTTCTTCACCTGAAAGAAACTGA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAGATGCAGAACTTGGTaGATGCACGGAGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPRCRTW*MHGVFI
Trigger: GATGAAGACTCCGTGCATTCACCAAGTTCTGCATCT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGAGCAGCTTCTGCACTaGGATCACACTTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGEQLLH*DHTFRF
Trigger: AAACCTGAAAGTGTGATCTCAGTGCAGAAGCTGCTC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGAGCAGCTTCTGCACTaGGATCACACTTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKEQLLH*DHTFRF
Trigger: AAACCTGAAAGTGTGATCTCAGTGCAGAAGCTGCTC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAATGTTTGCGAGCTGTTaGAACTTTGCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKMFASC*NFASCC
Trigger: GCAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACAT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGTTGTAAGGACTGGGTaGCATAGGAATCAGCAATTG +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIVVRTG*HRNQQL
Trigger: CAATTGCTGATTCCTATGTCACCCAGTCCTTACAAC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGAGTTCTTTCAAGTTCTaGGTCCAGCTAGCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESSFKF*VQLAKD
Trigger: GTCTTTGGCTAGCTGGACTCAGAACTTGAAAGAACT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAATTTGTTGCTGGCCTTaGTCAACTGGTCACCCATCT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKICCWP*STGHPS
Trigger: AGATGGGTGACCAGTTGATCAAGGCCAGCAACAAAT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCAGCTTCTTCACCCTTaGTCCGATGACATCAAAAAG +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIQLLHP*SDDIKK
Trigger: CTTTTTGATGTCATCGGATCAAGGGTGAAGAAGCTG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTGCCGTCCTCTCAGCTaGCTTGAGCCAGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNCRPLS*LEPVLK
Trigger: TTTGAGGACTGGCTCAAGTCAGCTGAGAGGACGGCA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGTGTACAACACCTCTaGGGAATTTGGGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNRVQHL*GIWAGC
Trigger: GCAGCCTGCCCAAATTCCTCAGAGGTGTTGTACACG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGCTCCCCAAACACAATaGGCTGATCAATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGAPQTQ*ADQSCW
Trigger: CCAACAAGATTGATCAGCTCATTGTGTTTGGGGAGC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCTGTCGAAGGCACCTaGCTGCTGCTCTGTGATACC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSVEGT*LLLCDT
Trigger: GGTATCACAGAGCAGCAGTCAGGTGCCTTCGACAGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTTTGGATCGGTGACATaGGCCTTCTGCCTCCGGTTC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNFGSVT*AFCLRF
Trigger: GAACCGGAGGCAGAAGGCTCATGTCACCGATCCAAA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGACACCACTGCTCATTaGCCATACCTACATTATAAT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSDTTAH*PYLHYN
Trigger: ATTATAATGTAGGTATGGTCAATGAGCAGTGGTGTC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGACACCACTGCTCATTaGCCATACCTACATTATAAT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCDTTAH*PYLHYN
Trigger: ATTATAATGTAGGTATGGTCAATGAGCAGTGGTGTC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGTGCCTATGAGTTTCTaGACCATTTCTAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRVPMSF*TISRVE
Trigger: TTCCACCCTAGAAATGGTTCAGAAACTCATAGGCAC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAGCTCAGGACTAGATaGCATTCTTTGACTCAATGG +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLKLRTR*HSLTQW
Trigger: CCATTGAGTCAAAGAATGGCATCTAGTCCTGAGCTT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATACTGCAGAAACTGTaGCACATAGGTCATGATGGA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKILQKL*HIGHDG
Trigger: TCCATCATGACCTATGTGGCACAGTTTCTGCAGTAT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAGCTTCTTGAATCTTTaGCTGAAGCCCAGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSSFLNL*LKPSCE
Trigger: CTCACAACTGGGCTTCAGGCAAAGATTCAAGAAGCT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGTATCTTCACTCCTCTaGACCCTGTGGTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPVSSLL*TLWFIP
Trigger: AGGAATGAACCACAGGGTGCAGAGGAGTGAAGATAC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCTTTTGCTGTAGAATCTaGTGTTGTATCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCFCCRI*CCISSS
Trigger: ACTAGAGGAGATACAACAGCAGATTCTACAGCAAAA...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCTCCTTCACATGTaGTTTGGGCAGATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSKLLHM*FGQMLL
Trigger: AAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCGCTGCTCTCAGCCTaGTTCATGATGGTCTCTATT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSLLSA*FMMVSI
Trigger: AATAGAGACCATCATGAAGCAGGCTGAGAGCAGCGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAGACTTTCGTGTAGATaGTTTATTTCCAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKRLSCR*FISSQG
Trigger: GCCTTGGCTGGAAATAAAGCATCTACACGAAAGTCT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACAACATTCCATCTCCTaGTTAGCAGATGCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGQHSIS*LADASL
Trigger: CAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATGTTGCTGCTGCTGTTaGAGAGAAATCTCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPCCCCC*REISVS
Trigger: GGACACTGAGATTTCTCTGCAACAGCAGCAGCAACA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAACGATTCCACAGACTaGTGCCTAGCTAGAATGCCA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGNDSTD*CLARMP
Trigger: TGGCATTCTAGCTAGGCAGCAGTCTGTGGAATCGTT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACAATTCCTTCTGAGATaGCTCCAAAGTAACATGGTG +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKQFLLR*LQSNMV
Trigger: CACCATGTTACTTTGGAGGCATCTCAGAAGGAATTG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGTCCTGGATGTGTaGTACTGTGGATTCCAATTC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPEVLDV*YCGFQF
Trigger: GAATTGGAATCCACAGTAGCACACATCCAGGACCTC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGAGGTCCTGGATGTGTaGTACTGTGGATTCCAATTC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGEVLDV*YCGFQF
Trigger: GAATTGGAATCCACAGTAGCACACATCCAGGACCTC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCCTGGGATTCAATCTCTaGAGGGACTATGGTGTACAT +
Preference number: 4 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCLGFNL*RDYGVH
Trigger: ATGTACACCATAGTCCCTGCAGAGATTGAATCCCAG...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCTCTTCCTCGACTGCTaGCAGGTAAGACATGGAGCC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNLFLDC*QVRHGA
Trigger: GGCTCCATGTCTTACCTGGCAGCAGTCGAGGAAGAG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCCATGTCCTTGTCATaGTTCCAAAGTGAAGACCAA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSMSLS*FQSEDQ
Trigger: TTGGTCTTCACTTTGGAAGCATGACAAGGACATGGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTGTTCCAGCACCTGCTaGATGTCTGCGTTTAATGTT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKICSSTC*MSAFNV
Trigger: AACATTAAACGCAGACATGCAGCAGGTGCTGGAACA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACACTGTATATGCATCTaGTTTCTGAAGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKHCICI*FLKLFS
Trigger: GCTGAACAGCTTCAGAAAGCAGATGCATATACAGTG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTGCAACAAAGCATCTTaGTGGCTCTCAGTGACGAAA +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPECNKAS*WLSVTK
Trigger: TTTCGTCACTGAGAGCCAGCAAGATGCTTTGTTGCA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAAGTTCCACCATGCCTTaGAACAAAGCATCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSSTMP*NKASCW
Trigger: CCAGCAAGATGCTTTGTTGCAAGGCATGGTGGAACT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAACGCCACCAACTGTTTaGCTTCGTTCAGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPTPPTV*LRSEFG
Trigger: ACCAAACTCTGAACGAAGGCAAACAGTTGGTGGCGT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATTCAGGGACAACCACTaGTCTTCCAGTTTTGCGATC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPFRDNH*SSSFAI
Trigger: GATCGCAAAACTGGAAGAGCAGTGGTTGTCCCTGAA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGCAGAACTTGGTGAATaGACGGAGTCTTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRAELGE*TESSSE
Trigger: TTCAGATGAAGACTCCGTGCATTCACCAAGTTCTGC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGCAGAACTTGGTGAATaGACGGAGTCTTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEAELGE*TESSSE
Trigger: TTCAGATGAAGACTCCGTGCATTCACCAAGTTCTGC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATGAGAAGGGCAGAACTTGGTGAATaGACGGAGTCTTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: CTFSSASIQSSPCPLMRRAELGE*TESSSE
Trigger: TTCAGATGAAGACTCCGTGCATTCACCAAGTTCTGC...CCTTCTCATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGCTTGCTGTGTTCCATaGAGTACCAGAATCGGATTG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPACCVP*STRIGL
Trigger: CAATCCGATTCTGGTACTGCATGGAACACAGCAAGC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATTCTGCACATCATGCTaGAGCTCCTTTATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGFCTSC*SSFMSC
Trigger: GCAGGACATAAAGGAGCTGCAGCATGATGTGCAGAA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGTTTTCTGCACATCATaGTGCAGCTCCTTTATGTCC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRVFCTS*CSSFMS
Trigger: GGACATAAAGGAGCTGCAGCATGATGTGCAGAAAAC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGTTTTCTGCACATCATaGTGCAGCTCCTTTATGTCC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSVFCTS*CSSFMS
Trigger: GGACATAAAGGAGCTGCAGCATGATGTGCAGAAAAC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGTTTTCTGCACATCATaGTGCAGCTCCTTTATGTCC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEVFCTS*CSSFMS
Trigger: GGACATAAAGGAGCTGCAGCATGATGTGCAGAAAAC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGTGGCCCGAATCCATTaGCGGTTCATATTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRVARIH*RFIFCN
Trigger: GTTACAAAATATGAACCGGCAATGGATTCGGGCCAC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATGAGAAGGGTGGCCCGAATCCATTaGCGGTTCATATTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: CTFSSASIQSSPCPLMRRVARIH*RFIFCN
Trigger: GTTACAAAATATGAACCGGCAATGGATTCGGGCCAC...CCTTCTCATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCACATCCACTTTGAGTaGTTCTTCTATCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCHIHFE*FFYLLQ
Trigger: TTGGAGAAGATAGAAGAAGCACTCAAAGTGGATGTG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAACAGTGCTCTGGAACTaGTTAATCATCTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPTVLWN*LIISAS
Trigger: GCTGGCAGAGATGATTAAGCAGTTCCAGAGCACTGT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTCCTCCCATTGTCTGTaGAAATGCTCTATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSSHCL*KCSICS
Trigger: GGAGCAAATAGAGCATTTGCACAGACAATGGGAGGA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTCCTCCCATTGTCTGTaGAAATGCTCTATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESSHCL*KCSICS
Trigger: GGAGCAAATAGAGCATTTGCACAGACAATGGGAGGA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGCAGTCTCTTCACTCTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCAACTGGTCACCCATCTaGTTTAACTGTAACTTGTTT +
Preference number: 4 (lower is better)
Translates to: CSLFTLSSISWISEGGFANWSPI*FNCNLF
Trigger: AAACAAGTTACAGTTAAAGCAGATGGGTGACCAGTT...GGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAGAGTGAAGAGACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTACCAGGTGCGAAGGTTaGTCATGTTTTTGTCCAACT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRTRCEG*SCFCPT
Trigger: AGTTGGACAAAAACATGAGCAACCTTCGCACCTGGT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCAGGCATCGGAGTCGTaGAGTAGGACGTCACAGATG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNQASES*SRTSQM
Trigger: CATCTGTGACGTCCTACTGCACGACTCCGATGCCTG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGTGGTTTATAAGGGGTaGTGGACGCAGGGGGAACAG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNVVYKG*WTQGEQ
Trigger: CTGTTCCCCCTGCGTCCAGCACCCCTTATAAACCAC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAGCTCCTTTTCCAGTTaGATTAGTTCCCTCCGACAC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGSSFSS*ISSLRH
Trigger: GTGTCGGAGGGAACTAATGCAACTGGAAAAGGAGCT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCTTGGGACACTTaGTCCCGTAACTGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLKSWDT*SRNCLS
Trigger: ACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTTCTGTAGTTCTCACTaGTCTGAACTGCTTTGCTCG +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIFCSSH*SELLCS
Trigger: CGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000458046.6
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTGTGATGGACACCACTaGTCATTGACCATACCTACA +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRCDGHH*SLTIPT
Trigger: TGTAGGTATGGTCAATGAGCAGTGGTGTCCATCACA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCTCACTGCTCTGAACTaGTGGGTAAAGAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELTALN*WVKKLC
Trigger: GCAAAGTTTCTTTACCCAGCAGTTCAGAGCAGTGAG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGCTTGCAATGAAATATaGAGATCGTCGATGCCCCAG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGACNEI*RSSMPQ
Trigger: CTGGGGCATCGACGATCTCCATATTTCATTGCAAGC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGCCAAGGATAATGGATaGGTTTCCATCAATGATATC +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCAKDNG*VSINDI
Trigger: GATATCATTGATGGAAACCCATCCATTATCCTTGGC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCCCAGGGGCATCTTTaGAATACTGCAGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSQGHL*NTAETV
Trigger: CACAGTTTCTGCAGTATTCCAAAGATGCCCCTGGGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTTCCCAGGGGCATCTTTaGAATACTGCAGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFSQGHL*NTAETV
Trigger: CACAGTTTCTGCAGTATTCCAAAGATGCCCCTGGGA...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTGTTCTAGATTCCACTaGGCTAGTGTCTCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSCSRFH*ASVSKG
Trigger: ACCCTTTGAGACACTAGCCCAGTGGAATCTAGAACA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGATCCAAAACAGATTTaGCTTCTGCCTCCCAGATTT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLDPKQI*LLPPRF
Trigger: AAATCTGGGAGGCAGAAGCCAAATCTGTTTTGGATC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGATGAAATCCCTGGATaGCCATTTTATGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIDEIPG*PFYGEA
Trigger: TGCCTCTCCATAAAATGGCCATCCAGGGATTTCATC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCTCCTCTGCACCCTGTaGTTCATTCCTTCAAATTGT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELLCTL*FIPSNC
Trigger: ACAATTTGAAGGAATGAACCACAGGGTGCAGAGGAG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCCGATGTTTCACAGCTaGAACAGTAGGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEPMFHS*NSRILK
Trigger: CTTAAGGATCCTACTGTTCCAGCTGTGAAACATCGG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTCCTTTGCTCGAGCCTaGCATATGGACTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKISFARA*HMDSIF
Trigger: AAAAATGGAGTCCATATGCCAGGCTCGAGCAAAGGA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATTTCTATGGTCATCCTaGAGTCTCAGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPFLWSS*SLSSCC
Trigger: GCAGCAGCTACTGAGACTCCAGGATGACCATAGAAA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAGCTCTGGTCCTCTGTaGGTAGTAACTTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSSSGPL*VVTYPL
Trigger: AAGAGGATAAGTTACTACCCACAGAGGACCAGAGCT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAGATCATTAAAGCTCTaGTCCTCTGTGGGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKRSLKL*SSVGSN
Trigger: GTTACTACCCACAGAGGACCAGAGCTTTAATGATCT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTAAGGCAATCATGCTTTaGTTCCCTGCCCGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFKAIML*FPARSS
Trigger: AGAAGAACGGGCAGGGAACCAAAGCATGATTGCCTT...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATTCTCAGTGAGGTCCTaGATGTGTGCTACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPFSVRS*MCATVD
Trigger: ATCCACAGTAGCACACATCCAGGACCTCACTGAGAA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATTCTCAGTGAGGTCCTaGATGTGTGCTACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGFSVRS*MCATVD
Trigger: ATCCACAGTAGCACACATCCAGGACCTCACTGAGAA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTACTGAAGTTGTAGTTTaGCTTCGGGGCTGGATATCA +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRTEVVV*LRGWIS
Trigger: TGATATCCAGCCCCGAAGCCAAACTACAACTTCAGT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAAGAGTTCCTCTGTGGTaGCTGCCTCTTTTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIRVPLW*LPLLFW
Trigger: CCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCT...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACACGTTCTCTCCATATTaGCATAAACAGTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHTFSPY*HKQSSS
Trigger: GCTGCTAGACTGTTTATGCCAATATGGAGAGAACGT...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCTCTGCAGGGACTATaGTGTACATTTCGGAATACT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSLQGL*CTFRNT
Trigger: AGTATTCCGAAATGTACACCATAGTCCCTGCAGAGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATTCTTGAGCCTGTCCTaGGTCCTGTTCAACAATGTC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGFLSLS*VLFNNV
Trigger: GACATTGTTGAACAGGACCCAGGACAGGCTCAAGAA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCATAGTCAGCAGGATTaGCCAGCAAATGACTGGTAT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRHSQQD*PANDWY
Trigger: ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCACACTATCTCAGCAATaGTTTTCTTCATGGGACGTA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCTLSQQ*FSSWDV
Trigger: TACGTCCCATGAAGAAAACCATTGCTGAGATAGTGT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGAAGGTTTAGTACGGTaGCCTTCAAGTCCACCAACA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGEGLVR*PSSPPT
Trigger: TGTTGGTGGACTTGAAGGCCACCGTACTAAACCTTC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCCAAGACTGAGGCGATaGCTCTGCCTTCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNPRLRR*LCLLIS
Trigger: GGAGATGAGAAGGCAGAGCCATCGCCTCAGTCTTGG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACCTCTTCTGTTTGGTTaGGCCTTAGGGAACATTCTG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKPLLFG*ALGNIL
Trigger: CAGAATGTTCCCTAAGGCCCAACCAAACAGAAGAGG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACACTTATCTCCATTTTaGCCCTGGGGTGACAAGATC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPHLSPF*PWGDKI
Trigger: GATCTTGTCACCCCAGGGCCAAAATGGAGATAAGTG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGAATACCCATATTTGTaGAAACCTGAGGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLEYPYL*KPEAPQ
Trigger: TTGTGGAGCCTCAGGTTTCCACAAATATGGGTATTC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGGTCTTCAAGTTGGGTaGTATAGGTTTTCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCGLQVG*YRFSVL
Trigger: AAGAACTGAAAACCTATACCACCCAACTTGAAGACC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAAGGTTACTTGCTTCTTaGCGCAGGTCTTCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKRLLAS*RRSSSW
Trigger: CCAACTTGAAGACCTGCGCCAAGAAGCAAGTAACCT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAACAAAGCATCTTGCTaGCTCTCAGTGACGAAAGGG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGNKASC*LSVTKG
Trigger: CCCTTTCGTCACTGAGAGCCAGCAAGATGCTTTGTT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATTGGCAGAGTATGCTTaGATCAACAACATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKLAEYA*INNMSA
Trigger: TGCTGACATGTTGTTGATCCAAGCATACTCTGCCAA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAAAGATTCCAACCACTTaGTTAACTGATCCGAATCTC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSKIPTT*LTDPNL
Trigger: GAGATTCGGATCAGTTAACCAAGTGGTTGGAATCTT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGTCGATCCAGGACACTaGAATTTTGGAGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEVDPGH*NFGERL
Trigger: AAGCCTTTCTCCAAAATTCCAGTGTCCTGGATCGAC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGTCTCTACAGTGCTCTaGAACTGCTTAATCATCTCT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLVSTVL*NCLIIS
Trigger: AGAGATGATTAAGCAGTTCCAGAGCACTGTAGAGAC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTCTTCAGTTCCTCTTTaGCACTCGTGTACAACACCT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSSVPL*HSCTTP
Trigger: AGGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAATGTAATTTCCTGTTaGAAGCCATTCAGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLNVISC*KPFSWR
Trigger: GCGCCAACTGAATGGCTTCCAACAGGAAATTACATT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCAGTCTGGATTTCTCTaGGGTCTTCCATGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEQSGFL*GLPCLF
Trigger: AAACAGACATGGAAGACCCCAGAGAAATCCAGACTG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATGAGAAGGCAGTCTGGATTTCTCTaGGGTCTTCCATGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: CTFSSASIQSSPCPLMRRQSGFL*GLPCLF
Trigger: AAACAGACATGGAAGACCCCAGAGAAATCCAGACTG...CCTTCTCATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGCAGGGGGAACAGGTaGAACATTCCTGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNRRGNR*NIPVTF
Trigger: GAAGGTGACAGGAATGTTCCACCTGTTCCCCCTGCG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGTTTATAAGGGGTGCTaGACGCAGGGGGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNVYKGC*TQGEQV
Trigger: CACCTGTTCCCCCTGCGTCCAGCACCCCTTATAAAC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACTCAGTTCTATTTCCTaGATATCAGAGGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKLSSIS*ISEGGF
Trigger: AAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCTGCCTCCGGTTCTTaGCACTCGCTAACCACAGCA +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSASGS*HSLTTA
Trigger: TGCTGTGGTTAGCGAGTGCCAAGAACCGGAGGCAGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAACCATTTCTAGGGTaGAATGTCCTCGCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPEPFLG*NVLACF
Trigger: GAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATCTTATTCATGCCCTTTaGAGCTGCTTTCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYLIHAL*SCFQNS
Trigger: GGAGTTCTGAAAGCAGCTCCAAAGGGCATGAATAAG...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATCCTCCAAAACAAGTATaGCTTTCTACTATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYPPKQV*LSTMCF
Trigger: GAAGCACATAGTAGAAAGCCATACTTGTTTTGGAGG...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 72 bp CAAGGCCCCAGTTTCTGTTTTGTTAAGACATTCTGTTaGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: QGPSFCFVKTFC*FQWLNGCFLCF
Trigger: GAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGAATGTCTTAACAAAACAGAAACTGGGGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCCTGTTCAGCTTGCAATaGAATATGGAGATCGTCGAT +
Preference number: 4 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCLFSLQ*NMEIVD
Trigger: ATCGACGATCTCCATATTTCATTGCAAGCTGAACAG...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAAGGCATGTTCTATATTaGTTCTACACTGGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSRHVLY*FYTGRY
Trigger: ATACCTTCCAGTGTAGAATCAATATAGAACATGCCT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACCCATTTCTCCAACTTaGCTTAAAATCGGTCACATT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKPISPT*LKIGHI
Trigger: AATGTGACCGATTTTAAGTCAAGTTGGAGAAATGGG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGGTACCAATGGCAAGTaGTTTTCATCCTTATTTTCA +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSGTNGK*FSSLFS
Trigger: TGAAAATAAGGATGAAAATCACTTGCCATTGGTACC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGTATTAAGAGTCATCTaGAGCTCTCTTTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKVLRVI*SSLSLS
Trigger: GGAAAGAGAAAGAGAGCTTCAGATGACTCTTAATAC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGTATTAAGAGTCATCTaGAGCTCTCTTTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLVLRVI*SSLSLS
Trigger: GGAAAGAGAAAGAGAGCTTCAGATGACTCTTAATAC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGTTCAAGACATTCGGTaGCCAAGGCTTTGGTATTCT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGVQDIR*PRLWYS
Trigger: AGAATACCAAAGCCTTGGTCACCGAATGTCTTGAAC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCGAATCCTGCAGTTGTTaGAGAAGACTTTCGTGTAGA +
Preference number: 4 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCESCSC*RRLSCR
Trigger: TCTACACGAAAGTCTTCTTCAACAACTGCAGGATTC...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCCTCAACCGCTATTTaGTCCACAGGCTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSSTAI*STGLSE
Trigger: TTCTGATAAGCCTGTGGATCAAATAGCGGTTGAGGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGAATCTTCTGCCCCACTaGAGATGTATTTTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPENLLPH*RCILLD
Trigger: GTCAAGCAAAATACATCTTCAGTGGGGCAGAAGATT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCAACAAGGCTTTCATTaGAGATTCAACTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEQQGFH*RFNCSK
Trigger: CTTGCTGCAGTTGAATCTTCAATGAAAGCCTTGTTG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGCACTTTCTGATCTGTaGAAGAATGTCATCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPALSDL*KNVIWE
Trigger: CTCCCAGATGACATTCTTTCACAGATCAGAAAGTGC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAACCAGCATTTGGTATTaGTTCCGTAAGTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGTSIWY*FRKSSR
Trigger: CCTAGAGGACTTACGGAATCAATACCAAATGCTGGT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCCAAAGTAACATGGTaGTGTTTTAGTTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSKVTW*CFSSAS
Trigger: GGAAGCTGAACTAAAACATCACCATGTTACTTTGGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATGTTTGTTAGCTCCTaGAGATGTGTTGAGATTCCA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKMFVSS*RCVEIP
Trigger: TGGAATCTCAACACATCTTCAGGAGCTAACAAACAT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCCGACACAATCTTaGGCAAACATATGCCATCAT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPEPTQS*ANICHH
Trigger: ATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACATTCTGGATACTTCTaGTGCGCTGAAGAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGHSGYF*CAEEVE
Trigger: CTCTACTTCTTCAGCGCATCAGAAGTATCCAGAATG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACTCCTCAAATTGTTCTaGCTTTTCTGGGTGATCCTG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKLLKLF*LFWVIL
Trigger: CAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACTCCTCAAATTGTTCTaGCTTTTCTGGGTGATCCTG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPLLKLF*LFWVIL
Trigger: CAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTGTTCAACAATGTCCTaGACTTCAGAATCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSCSTMS*TSESSS
Trigger: TGAGCTGGATTCTGAAGTTCAGGACATTGTTGAACA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCTGTTCAACAATGTCCTaGACTTCAGAATCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSCSTMS*TSESSS
Trigger: TGAGCTGGATTCTGAAGTTCAGGACATTGTTGAACA...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGGATTGGCCAGCAAATaGCTGGTATTTTCTATCCAA +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEGLASK*LVFSIQ
Trigger: TTGGATAGAAAATACCAGTCATTTGCTGGCCAATCC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAATTGTTCCAGAGGATaGGGAAGCTCTGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGNCSRG*GSSVFF
Trigger: GAAGAAGACAGAGCTTCCTCATCCTCTGGAACAATT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTTCCCATATGCTTCCTaGACAATTGTTCCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIFPYAS*TIVPED
Trigger: ATCCTCTGGAACAATTGTTCAGGAAGCATATGGGAA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCAACACTCTGCCCACTaGTTTCATTCAAAGACTGTT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSQHSAH*FHSKTV
Trigger: AACAGTCTTTGAATGAAATCAGTGGGCAGAGTGTTG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCAACACTCTGCCCACTaGTTTCATTCAAAGACTGTT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEQHSAH*FHSKTV
Trigger: AACAGTCTTTGAATGAAATCAGTGGGCAGAGTGTTG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATATGCATCTGCTTTCTaGAGCTGTTCAGCAACACTC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPYASAF*SCSATL
Trigger: GAGTGTTGCTGAACAGCTTCAGAAAGCAGATGCATA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAATTGTATCCAAGTCCTaGGACACATTGAGGGACTGT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKIVSKS*DTLRDC
Trigger: ACAGTCCCTCAATGTGTCTCAGGACTTGGATACAAT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCTTCATCTGAAGTTTaGTGCTCCACATTGTTCATC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSSSEV*CSTLFI
Trigger: GATGAACAATGTGGAGCATCAAACTTCAGATGAAGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACGGAGTCTTCATCTaGAGTTTGATGCTCCACATT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGHGVFI*SLMLHI
Trigger: AATGTGGAGCATCAAACTTCAGATGAAGACTCCGTG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATGTTTCCAGACATGCTaGTGTTTGCGAGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGCFQTC*CLRAVE
Trigger: TTCAACAGCTCGCAAACATCAGCATGTCTGGAAACA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATACAACCCATGTATTaGGTCTGTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKIQPMY*VCLQSP
Trigger: AGGAGATTGAAGACAGACTCAATACATGGGTTGTAT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACAGCTTCTTCACCCTTaGTCCGATGACATCAAAAAG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGQLLHP*SDDIKK
Trigger: CTTTTTGATGTCATCGGATCAAGGGTGAAGAAGCTG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGACACCACTGCTCATTaGCCATACCTACATTATAAT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLDTTAH*PYLHYN
Trigger: ATTATAATGTAGGTATGGTCAATGAGCAGTGGTGTC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGTCAGTGCCAGCACATaGTTCTCAAATTCATTTGCT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIVSAST*FSNSFA
Trigger: AGCAAATGAATTTGAGAATCATGTGCTGGCACTGAC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCCATACTTGATCCGATaGCATCAAAAAGATGTTGCC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEPYLIR*HQKDVA
Trigger: GGCAACATCTTTTTGATGTCATCGGATCAAGTATGG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTAAGCTCAGGACTAGATaGCATTCTTTGACTCAATGG +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIKLRTR*HSLTQW
Trigger: CCATTGAGTCAAAGAATGGCATCTAGTCCTGAGCTT...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCTCAGGACTAGATaGCATTCTTTGACTCAATGG +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSKLRTR*HSLTQW
Trigger: CCATTGAGTCAAAGAATGGCATCTAGTCCTGAGCTT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTAAGCTCAGGACTAGATaGCATTCTTTGACTCAATGG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRKLRTR*HSLTQW
Trigger: CCATTGAGTCAAAGAATGGCATCTAGTCCTGAGCTT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAAGACATTTGCCATCTTaGTTGCACTTTAGAGCATTT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSRHLPS*LHFRAF
Trigger: AAATGCTCTAAAGTGCAAGCAAGATGGCAAATGTCT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACAGACATTTGCCATCTTaGTTGCACTTTAGAGCATTT +
Preference number: 4 (lower is better)
Translates to: SSTWDSISAGTMVYISEYRHLPS*LHFRAF
Trigger: AAATGCTCTAAAGTGCAAGCAAGATGGCAAATGTCT...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AGAGAGTTCCTCTGTGGTGGCTGCCTCTTTTGTTTTGGAAATTTCAGGGAGTTCTCTTTGTTGGATCTATaGTTCACACTCTTCATGTCA +
Preference number: 4 (lower is better)
Translates to: REFLCGGCLFCFGNFREFSLLDL*FTLFMS
Trigger: TGACATGAAGAGTGTGAAGCATAGATCCAACAAAGA...GAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTATACTGCAGAAACTGTaGCACATAGGTCATGATGGA +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIILQKL*HIGHDG
Trigger: TCCATCATGACCTATGTGGCACAGTTTCTGCAGTAT...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAAGCTTCTTGAATCTTTaGCTGAAGCCCAGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSFLNL*LKPSCE
Trigger: CTCACAACTGGGCTTCAGGCAAAGATTCAAGAAGCT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCCTTTAATACAAAGTTaGCTGGCTCTTCTAAGCGGT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEPLIQS*LALLSG
Trigger: ACCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCATCATACTGTGTTTTTaGTGTAGAATCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CKTVATRTWTVQELSPFCIILCF*CRICCC
Trigger: ACAACAGCAGATTCTACAGCAAAAACACAGTATGAT...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAAGCTCCTTCACATGTaGTTTGGGCAGATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGKLLHM*FGQMLL
Trigger: AAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAGACTTTCGTGTAGATaGTTTATTTCCAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSRLSCR*FISSQG
Trigger: GCCTTGGCTGGAAATAAAGCATCTACACGAAAGTCT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACAGTGGCTTAATGGCTaGTTTCTTTGCTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGQWLNG*FLCFQL
Trigger: CAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGATTGTCCAAATGCTGTaGCGAATATCCTATATTGTG +
Preference number: 4 (lower is better)
Translates to: SREFSCSERRQKVFQSFEIVQML*RISYIV
Trigger: CACAATATAGGATATTCGGCACAGCATTTGGACAAT...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp GAGCCAACTGATAAGCTCCTTCACATGTGCTTTGGGCAGATGCTTCTTCACATGATAATGCCTGATATTTaGCATGTTCTTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: EPTDKLLHMCFGQMLLHMIMPDI*HVLPQM
Trigger: CATTTGAGGAAGAACATGGCAAATATCAGGCATTAT...CATGTGAAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTTATCAGTTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCTGCCTCAGTTTCCTGTaGTTTGAAAGCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSCLSFL*FESFLH
Trigger: ATGAAGGAAGCTTTCAAAGCACAGGAAACTGAGGCA...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTGTTTCCGGCTCAACTaGCACGTTGGCTTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNCFRLN*HVGLLQ
Trigger: CTGCAACAAGCCAACGTGGCAGTTGAGCCGGAAACA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTCCAGAACCTGTTGCTaGTGGAAATCTTTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKISRTCC*WKSFCL
Trigger: CAGACAAAAAGATTTCCAGCAGCAACAGGTTCTGGA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTCCAGAACCTGTTGCTaGTGGAAATCTTTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSRTCC*WKSFCL
Trigger: CAGACAAAAAGATTTCCAGCAGCAACAGGTTCTGGA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAACTCCAGAACCTGTTaGTGCTGGAAATCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLNSRTC*CWKSFC
Trigger: ACAAAAAGATTTCCAGCAGCAACAGGTTCTGGAGTT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATGCAACAAAGCATCTTaGTGGCTCTCAGTGACGAAA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGCNKAS*WLSVTK
Trigger: TTTCGTCACTGAGAGCCAGCAAGATGCTTTGTTGCA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAATTCTTCCCATTTCTaGAACAAACTCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKNSSHF*NKLCSF
Trigger: GAAGCTGCAGAGTTTGTTGCAGAAATGGGAAGAATT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTTTCTACATCACAGGTaGTTAGCTGAAGTAATGACT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCFLHHR*LAEVMT
Trigger: AGTCATTACTTCAGCTAAGCACCTGTGATGTAGAAA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTTCTTTCATAGCGCTTaGTTTCTACATCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSFFHSA*FLHHRC
Trigger: GCACCTGTGATGTAGAAAGCAAGCGCTATGAAAGAA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGCTTCTTTTGTTTTCTaGACATCATGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGASFVF*TSCCSS
Trigger: GGAGCTGCAGCATGATGTGCAGAAAACAAAAGAAGC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AATAACATGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATCTTTGCCACCATCCGTaGCTGGAGGTAATAGTAGCT +
Preference number: 4 (lower is better)
Translates to: NNMHLFFSFNTVFSMSLNLCHHP*LEVIVA
Trigger: AGCTACTATTACCTCCAGGCACGGATGGTGGCAAAG...ATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCATGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGCTTTCAGTATCTCCTaGAGTCTCTTCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKAFSIS*SLFTLS
Trigger: ACTGAGAGTGAAGAGACTGCAGGAGATACTGAAAGC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGCTTTCAGTATCTCCTaGAGTCTCTTCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPAFSIS*SLFTLS
Trigger: ACTGAGAGTGAAGAGACTGCAGGAGATACTGAAAGC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTTTGCCACCATCCGTGCCTGGAGGTAATAGTAGCTTTCCATAGGGTGGTTTATTTCTTCTCAATAACATaGACCTTTTCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LCHHPCLEVIVAFHRVVYFFSIT*TFSSAS
Trigger: TGAAGCTGAAGAAAAGGTGCATGTTATTGAGAAGAA...ATAAACCACCCTATGGAAAGCTACTATTACCTCCAGGCACGGATGGTGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTAAATCTTGGGACACTTaGTCCCGTAACTGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIKSWDT*SRNCLS
Trigger: ACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTT...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATTCTGTAGTTCTCACTaGTCTGAACTGCTTTGCTCG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPFCSSH*SELLCS
Trigger: CGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000458046.6
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACCGGCAGCTCAAAATTaGCAGCTGATTGGAGTAAAA +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPPAAQN*QLIGVK
Trigger: TTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCCACAGCTGAATCCTaGATTTCATCTGAAATGAAA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSTAES*ISSEMK
Trigger: TTTCATTTCAGATGAAATGCAGGATTCAGCTGTGGA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR GCA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTCCTATGACTTATTCATaGCCTTTGGAGCTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCPMTYS*PLELLS
Trigger: TGAAAGCAGCTCCAAAGGGCATGAATAAGTCATAGG...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGATTGTCTTTGTTaGATCTATGCTTCACACTCT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSDCLC*IYASHS
Trigger: AGAGTGTGAAGCATAGATCCAACAAAGACAATCTGA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTAACATCCACATCTTCTaGTTCCAGCAATCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFNIHIF*FQQSGD
Trigger: ATCCCCAGATTGCTGGAACCAGAAGATGTGGATGTT...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACGTTAGGTGGTACCAATaGCAAGTGATTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHVRWYQ*QVIFIL
Trigger: AAGGATGAAAATCACTTGCCATTGGTACCACCTAAC...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAGATGAAATCCCTGGATaGCCATTTTATGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIDEIPG*PFYGEA
Trigger: TGCCTCTCCATAAAATGGCCATCCAGGGATTTCATC...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGCCATCTTTGAAGTGTaGAAGAGAATTAGCCATTTC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKAIFEV*KRISHF
Trigger: GAAATGGCTAATTCTCTTCCACACTTCAAAGATGGC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTTCCTTTGCTCGAGCCTaGCATATGGACTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: SSHASVRCPPALFYCFFLSFARA*HMDSIF
Trigger: AAAAATGGAGTCCATATGCCAGGCTCGAGCAAAGGA...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATTCCTCAGGTTTCTATaGTCATCCTGGAGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPFLRFL*SSWSLS
Trigger: ACTGAGACTCCAGGATGACCATAGAAACCTGAGGAA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGAAAGAGTTGTTCAATTaGGCCACAGATTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: SREFSCSERRQKVFQSFEKELFN*ATDSNC
Trigger: ACAGTTTGAATCTGTGGCCCAATTGAACAACTCTTT...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGAGATCATTAAAGCTCTaGTCCTCTGTGGGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPERSLKL*SSVGSN
Trigger: GTTACTACCCACAGAGGACCAGAGCTTTAATGATCT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTTCTGTTTGTTCCAGTaGCTTAATGGCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLFCLFQ*LNGCFL
Trigger: AAGAAAGCAGCCATTAAGCCACTGGAACAAACAGAA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCGTTACACTGTCCAGTaGTCCTACTTTAAGACTTTC +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIRYTVQ*SYFKTF
Trigger: GAAAGTCTTAAAGTAGGACCACTGGACAGTGTAACG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCGTTACACTGTCCAGTaGTCCTACTTTAAGACTTTC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRRYTVQ*SYFKTF
Trigger: GAAAGTCTTAAAGTAGGACCACTGGACAGTGTAACG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACTGGAATGCCATATTTTaGAATGAAGTTGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SSTWDSISAGTMVYISEYWNAIF*NEVVVC
Trigger: ACAGACCACAACTTCATTCCAAAATATGGCATTCCA...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGCCAGCTCATTTAGTTTaGAATGCCATAGATCTAACT +
Preference number: 4 (lower is better)
Translates to: SREFSCSERRQKVFQSFEPAHLV*NAIDLT
Trigger: AGTTAGATCTATGGCATTCCAAACTAAATGAGCTGG...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTGGCCAGCAAATGACTaGTATTTTCTATCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSWPAND*YFLSKP
Trigger: AGGCTTGGATAGAAAATACCAGTCATTTGCTGGCCA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAGGTCTTCTTTTCTCTaGTTCAAACTCAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCRSSFL*FKLRIC
Trigger: ACAGATTCTGAGTTTGAACCAGAGAAAAGAAGACCT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGTATCGTTATCATGTTaGCAATACTGGGGCCACATT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIVSLSC*QYWGHI
Trigger: AATGTGGCCCCAGTATTGCCAACATGATAACGATAC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGTCATTTTCAGGGCTaGATGCCTGGTTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNRHFQG*MPGCLQ
Trigger: CTGCAAGCAACCAGGCATCCAGCCCTGAAAATGACG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTTGGCAGAGTATGCTTaGATCAACAACATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELAEYA*INNMSA
Trigger: TGCTGACATGTTGTTGATCCAAGCATACTCTGCCAA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAAGAAGGAAGTATTTTaGCAGAGTATGCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCKKEVF*QSMLGS
Trigger: TGATCCAAGCATACTCTGCCAAAATACTTCCTTCTT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAGCCTGTGGAGCTCATaGTCAATTTTCTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSLWSS*SIFLFR
Trigger: CCTGAACAAGAAAATTGACCATGAGCTCCACAGGCT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGTCGATCCAGGACACTaGAATTTTGGAGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGVDPGH*NFGERL
Trigger: AAGCCTTTCTCCAAAATTCCAGTGTCCTGGATCGAC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTTTGCCACCATCCGTGCCTGGAGGTAATAGTAGCTTTCCATAGGGTGGTTTATGAATCAGCAATTGTCTaGTTTATAGAAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LCHHPCLEVIVAFHRVVYESAIV*FIETSA
Trigger: AGCTGAAGTTTCTATAAACCAGACAATTGCTGATTC...ATAAACCACCCTATGGAAAGCTACTATTACCTCCAGGCACGGATGGTGGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACACTGCAGATAGCAGGTaGCTGGTGTCAGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNTADSR*LVSVRK
Trigger: CTTCCTCACTGACACCAGCCACCTGCTATCTGCAGT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGTCTCTACAGTGCTCTaGAACTGCTTAATCATCTCT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIVSTVL*NCLIIS
Trigger: AGAGATGATTAAGCAGTTCCAGAGCACTGTAGAGAC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGTCTCTACAGTGCTCTaGAACTGCTTAATCATCTCT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSVSTVL*NCLIIS
Trigger: AGAGATGATTAAGCAGTTCCAGAGCACTGTAGAGAC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTATTTTCTTTTCACACTaGTCCCAGGTCTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRIFFSH*SQVSTV
Trigger: CACTGTAGAGACCTGGGACCAGTGTGAAAAGAAAAT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCATAAACAACAGGCTTaGAAAGCTCAGACTCAATTC +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLHKQQA*KAQTQF
Trigger: GAATTGAGTCTGAGCTTTCCAAGCCTGTTGTTTATG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACAGTCTGGATTTCTCTaGGGTCTTCCATGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKQSGFL*GLPCLF
Trigger: AAACAGACATGGAAGACCCCAGAGAAATCCAGACTG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCTCAGTTCTATTTCCTaGATATCAGAGGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRLSSIS*ISEGGF
Trigger: AAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAAAGGCCATTAAATCTTaGGACACTTGCTCCCGTAAC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKKAIKS*DTCSRN
Trigger: GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACACCGGGCAAAGTTGTTaGCCTGAGTGCAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNTGQSC*PECSCS
Trigger: ACTACAGCTGCACTCAGGCCAACAACTTTGCCCGGT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CTTTGCCACCATCCGTGCCTGGAGGTAATAGTAGCTTTCCATAGGGTGGTTTATAAATTGCCAGCTGATTaGAGTAAAACTGATTCTAAG +
Preference number: 4 (lower is better)
Translates to: LCHHPCLEVIVAFHRVVYKLPAD*SKTDSK
Trigger: CTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTT...ATAAACCACCCTATGGAAAGCTACTATTACCTCCAGGCACGGATGGTGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCTGAACAGAACATTTTaGTGTATAACCGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKILNRTF*CITGSS
Trigger: TGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCTGAACAGAACATTTTaGTGTATAACCGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSLNRTF*CITGSS
Trigger: TGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CAA 72 bp AGCAAATTGTCCAAATGCTGTGCCGAATATCCTATATaGTGGAGAACCAAGGCCCCAGTTTCTGTTTTGTTA +
Preference number: 4 (lower is better)
Translates to: SKLSKCCAEYPI*WRTKAPVSVLL
Trigger: TAACAAAACAGAAACTGGGGCCTTGGTTCTCCACAATATAGGATATTCGGCACAGCATTTGGACAATTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 72 bp AGGGGAATGGAGGGATTAAGTTCACCCAACAAATTCTaGGCCCATAAGATAGTCTCTTTCATCTTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: RGMEGLSSPNKF*AHKIVSFILFL
Trigger: AAGGAACAAGATGAAAGAGACTATCTTATGGGCCAAGAATTTGTTGGGTGAACTTAATCCCTCCATTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATCCCATTTCTCCAACTTaGCTTAAAATCGGTCACATT +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYPISPT*LKIGHI
Trigger: AATGTGACCGATTTTAAGTCAAGTTGGAGAAATGGG...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTAGGAGAATGTTCGAATaGTGCTCAAATCTATCCATC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRRRMFE*CSNLSI
Trigger: GATGGATAGATTTGAGCATCATTCGAACATTCTCCT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTAGGAGAATGTTCGAATaGTGCTCAAATCTATCCATC +
Preference number: 4 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCRRMFE*CSNLSI
Trigger: GATGGATAGATTTGAGCATCATTCGAACATTCTCCT...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCAACCACATCATTGCTaGCTTCGACTAAGAAATTTC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRQPHHC*LRLRNF
Trigger: GAAATTTCTTAGTCGAAGTCAGCAATGATGTGGTTG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCAACCACATCATTGCTaGCTTCGACTAAGAAATTTC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSQPHHC*LRLRNF
Trigger: GAAATTTCTTAGTCGAAGTCAGCAATGATGTGGTTG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCCCTTGTGTTTTGAAATaGGTTCACCGGGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSPCVLK*VHRGSL
Trigger: GAGAGAGCCCCGGTGAACTCATTTCAAAACACAAGG...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGTATTAAGAGTCATCTaGAGCTCTCTTTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEVLRVI*SSLSLS
Trigger: GGAAAGAGAAAGAGAGCTTCAGATGACTCTTAATAC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATGTATTAAGAGTCATCTaGAGCTCTCTTTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYVLRVI*SSLSLS
Trigger: GGAAAGAGAAAGAGAGCTTCAGATGACTCTTAATAC...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTTCCATTTCTCTTCTTaGTTAGTCAACCACTTCCTC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRFHFSS*LVNHFL
Trigger: GAGGAAGTGGTTGACTAATCAAGAAGAGAAATGGAA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCATTTTGCCTTCGGATaGATTCAAAACCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIHFAFG*IQNHKG
Trigger: TCCCTTATGGTTTTGAATTCATCCGAAGGCAAAATG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTGCCATCTTGTAAACTaGGTCTATTCTCTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSCHLVN*VYSLVP
Trigger: AGGAACTAGAGAATAGACTCAGTTTACAAGATGGCA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAAATCTTCTGCCCCACTaGAGATGTATTTTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKNLLPH*RCILLD
Trigger: GTCAAGCAAAATACATCTTCAGTGGGGCAGAAGATT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCACTGCAGCTGATTCCTaGGTAGACTCCTGCACATCA +
Preference number: 4 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSTAADS*VDSCTS
Trigger: TGATGTGCAGGAGTCTACTCAGGAATCAGCTGCAGT...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAAAGTAATAAGTGCCTaGAGCAAATTGTCCAAATGC +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKKVISA*SKLSKC
Trigger: GCATTTGGACAATTTGCTTCAGGCACTTATTACTTT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCCTGAAAATCTCTaGGGACACAATATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKIPENL*GHNIGF
Trigger: AAAGCCAATATTGTGTCCTCAGAGATTTTCAGGAAT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTCAACAAGGCTTTCATTaGAGATTCAACTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFQQGFH*RFNCSK
Trigger: CTTGCTGCAGTTGAATCTTCAATGAAAGCCTTGTTG...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCTTGCAATTCCTTCTaGGATGCCTCCAAAGTAACA +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSCNSF*DASKVT
Trigger: TGTTACTTTGGAGGCATCTCAGAAGGAATTGCAAGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTATGTTTGTTAGCTCCTaGAGATGTGTTGAGATTCCA +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSMFVSS*RCVEIP
Trigger: TGGAATCTCAACACATCTTCAGGAGCTAACAAACAT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATATGTTTGTTAGCTCCTaGAGATGTGTTGAGATTCCA +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYMFVSS*RCVEIP
Trigger: TGGAATCTCAACACATCTTCAGGAGCTAACAAACAT...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTCCTGTAAAGTATACTaGAGTTGTAGTTTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSSCKVY*SCSLAS
Trigger: CGAAGCCAAACTACAACTTCAGTATACTTTACAGGA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCAGTTTCCACAGCCCCTaGGCTTTCAGGAACATTCTG +
Preference number: 4 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSSFHSP*AFRNIL
Trigger: CAGAATGTTCCTGAAAGCTCAGGGGCTGTGGAAACT...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTTGCCATATTTTGGAATaGAGTTGTGGTCTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: RMLLRQHSISCLADASLFCHILE*SCGLLK
Trigger: TTTCAACAGACCACAACTTCATTCCAAAATATGGCA...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCATCTTGCAGAGACTaGAGGTTCTCCACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSSCRD*RFSTWH
Trigger: ATGCCAGGTGGAGAACCTTCAGTCTCTGCAAGATGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTCTTTTTCCTGTTGGTaGAGTCTATCCAAATTCTCT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSFSCW*SLSKFS
Trigger: AGAGAATTTGGATAGACTTCACCAACAGGAAAAAGA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCCAAACACAATGAGCTaGTCAATCTTGTTGGTATTT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLPNTMS*SILLVF
Trigger: AAATACCAACAAGATTGATCAGCTCATTGTGTTTGG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGACACCACTGCTCATTaGCCATACCTACATTATAAT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSDTTAH*PYLHYN
Trigger: ATTATAATGTAGGTATGGTCAATGAGCAGTGGTGTC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAGCAGAGCTAGGTACTaGACAGAACATTTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSRARY*TEHFGV
Trigger: TACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATACAAGATTTTGCCCTATaGCTTATTCATGCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIQDFAL*LIHALW
Trigger: CCAAAGGGCATGAATAAGTCATAGGGCAAAATCTTG...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATACATGTCCATCTCAGTTaGAGAAGTGAACTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIHVHLS*RSELKV
Trigger: CACTTTCAGTTCACTTCTTCAACTGAGATGGACATG...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACATTTGCCATCTTGCTTaGACTTTAGAGCATTTCTTA +
Preference number: 4 (lower is better)
Translates to: SSTWDSISAGTMVYISEYICHLA*TLEHFL
Trigger: TAAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAAT...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACCTTTGGCAATAAGATaGTTCAAAGATTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSPLAIR*FKDSSI
Trigger: AATGGAAGAATCTTTGAAGCATCTTATTGCCAAAGG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACATATCTTCACTTCTTaGCATAAGCTCATCAAACAT +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSHIFTS*HKLIKH
Trigger: ATGTTTGATGAGCTTATGGCAAGAAGTGAAGATATG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACCATATCTTCACTTCTTaGCATAAGCTCATCAAACAT +
Preference number: 4 (lower is better)
Translates to: SSTWDSISAGTMVYISEYHIFTS*HKLIKH
Trigger: ATGTTTGATGAGCTTATGGCAAGAAGTGAAGATATG...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCATAATGCTTTCTTCTTaGAGAGGCCTTAACACTGAT +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLIMLSS*RGLNTD
Trigger: ATCAGTGTTAAGGCCTCTGCAAGAAGAAAGCATTAT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACCTTTAATACAAAGTTaGCTGGCTCTTCTAAGCGGT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKPLIQS*LALLSG
Trigger: ACCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACCTTTAATACAAAGTTaGCTGGCTCTTCTAAGCGGT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGPLIQS*LALLSG
Trigger: ACCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCCTCAAGTGGCATTTTaGCTTCGGATGAATTCAAAA +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIPQVAF*LRMNSK
Trigger: TTTTGAATTCATCCGAAGGCAAAATGCCACTTGAGG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAGTTCCTGCAGTTTCTaGAATTTTTCCTCAACCGCT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGSSCSF*NFSSTA
Trigger: AGCGGTTGAGGAAAAATTGCAGAAACTGCAGGAACT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAAGTTCCTGCAGTTTCTaGAATTTTTCCTCAACCGCT +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWISSCSF*NFSSTA
Trigger: AGCGGTTGAGGAAAAATTGCAGAAACTGCAGGAACT...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAGCAAATTGTCCAAATaGTGTGCCGAATATCCTATA +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSKLSK*CAEYPI
Trigger: TATAGGATATTCGGCACAGCATTTGGACAATTTGCT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTAGCAAATTGTCCAAATaGTGTGCCGAATATCCTATA +
Preference number: 4 (lower is better)
Translates to: RMLLRQHSISCLADASLFSKLSK*CAEYPI
Trigger: TATAGGATATTCGGCACAGCATTTGGACAATTTGCT...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATGTAGATGTTGCTGCTaGTGTTGCAGAGAAATCTCA +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKCRCCC*CCREIS
Trigger: TGAGATTTCTCTGCAACAGCAGCAGCAACATCTACA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTGGTCAAGGCAATCATaGTTTGGTTCCCTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNWSRQS*FGSLPV
Trigger: AACGGGCAGGGAACCAAAGCATGATTGCCTTGACCA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAATACTACACATTTCTaGCCAAACTTGCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLNTTHF*PNLLLK
Trigger: TTTCAGGAGCAAGTTTGGGCAGAAATGTGTAGTATT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAACAAATTTCCATTCCTaGTTCAGTTCTTCGCACCAC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGTNFHS*FSSSHH
Trigger: GTGGTGCGAAGAACTGAAGCAGGAATGGAAATTTGT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATATTCCTCTGTGGTGGCTaGCTCTTTTGTTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIFLCGG*LFCFGN
Trigger: ATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAA...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATGGTGTGAGGATTTGTaGCATGGAATTATCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKWCEDL*HGIIRG
Trigger: ACCTCTGATAATTCCATGGCACAAATCCTCACACCA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCCAGAACCTGTTGCTaGTGGAAATCTTTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSRTCC*WKSFCL
Trigger: CAGACAAAAAGATTTCCAGCAGCAACAGGTTCTGGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACTGTATATGCATCTaGTTTCTGAAGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGHCICI*FLKLFS
Trigger: GCTGAACAGCTTCAGAAAGCAGATGCATATACAGTG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAATCATTTCTGTGATTaGTTTACGAGACGGCAATTT +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCNHFCD*FTRRQF
Trigger: AAATTGCCGTCTCGTAAAGCAATCACAGAAATGATT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AATAACATGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATTTCTGCACATCATGCTaGAGCTCCTTTATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: NNMHLFFSFNTVFSMSLNFCTSC*SSFMSC
Trigger: GCAGGACATAAAGGAGCTGCAGCATGATGTGCAGAA...ATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCATGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGAAGTAGTGAAATCTTaGCACTGCCTCACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNEVVKS*HCLTSP
Trigger: TGGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATGTGCCTTTAAAACTTaGAGCCTGCTTTTCAACTCC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPCAFKT*SLLFNS
Trigger: GGAGTTGAAAAGCAGGCTGCAAGTTTTAAAGGCACA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTTCTTCTCAATAACATaGACCTTTTCTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LGWNVLACFYNICDGHHCFFSIT*TFSSAS
Trigger: TGAAGCTGAAGAAAAGGTGCATGTTATTGAGAAGAA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGAGTTTATTTCTTCCATaGAGTCTTGGGGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESLFLP*SLGVSA
Trigger: AGCTGATACCCCAAGACTGCATGGAAGAAATAAACT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGCCAAGGATAATGGATaGGTTTCCATCAATGATATC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRAKDNG*VSINDI
Trigger: GATATCATTGATGGAAACCCATCCATTATCCTTGGC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCAGATTGTCTTTGTTaGATCTATGCTTCACACTCT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSDCLC*IYASHS
Trigger: AGAGTGTGAAGCATAGATCCAACAAAGACAATCTGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACTCAGATTGTCTTTGTTaGATCTATGCTTCACACTCT +
Preference number: 4 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHSDCLC*IYASHS
Trigger: AGAGTGTGAAGCATAGATCCAACAAAGACAATCTGA...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGTTAGGTGGTACCAATaGCAAGTGATTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEVRWYQ*QVIFIL
Trigger: AAGGATGAAAATCACTTGCCATTGGTACCACCTAAC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGATCCAAAACAGATTTaGCTTCTGCCTCCCAGATTT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPDPKQI*LLPPRF
Trigger: AAATCTGGGAGGCAGAAGCCAAATCTGTTTTGGATC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGCCATCTTTGAAGTGTaGAAGAGAATTAGCCATTTC +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSAIFEV*KRISHF
Trigger: GAAATGGCTAATTCTCTTCCACACTTCAAAGATGGC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTTTCTAGCTAAAGCTTaGCAGAACAGCTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRFLAKA*QNSSVF
Trigger: GAAAACTGAGCTGTTCTGCCAAGCTTTAGCTAGAAA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATTTTCTAGCTAAAGCTTaGCAGAACAGCTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYFLAKA*QNSSVF
Trigger: GAAAACTGAGCTGTTCTGCCAAGCTTTAGCTAGAAA...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAGATCATTAAAGCTCTaGTCCTCTGTGGGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPRSLKL*SSVGSN
Trigger: GTTACTACCCACAGAGGACCAGAGCTTTAATGATCT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTAGATCATTAAAGCTCTaGTCCTCTGTGGGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: SSHASVRCPPALFYCFFLRSLKL*SSVGSN
Trigger: GTTACTACCCACAGAGGACCAGAGCTTTAATGATCT...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCTGTGACGCAAACCTaGTATGAATCATGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSVTQT*YESCSR
Trigger: TCGAGAACATGATTCATACCAGGTTTGCGTCACAGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATTCCATGTCAGTCACGTaGTTTGATAAATTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYSMSVT*FDKFSH
Trigger: ATGGGAGAATTTATCAAACCACGTGACTGACATGGA...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAACTTGGGTTTGTAATTaGTCAAGTTGTGAAAAATCC +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSTWVCN*SSCEKS
Trigger: GGATTTTTCACAACTTGACCAATTACAAACCCAAGT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACGTTCTCTCCATATTaGCATAAACAGTCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKTFSPY*HKQSSS
Trigger: GCTGCTAGACTGTTTATGCCAATATGGAGAGAACGT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATGGAATGCCATATTTTaGAATGAAGTTGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKWNAIF*NEVVVC
Trigger: ACAGACCACAACTTCATTCCAAAATATGGCATTCCA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATATCTCTGCAGGGACTATaGTGTACATTTCGGAATACT +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWISLQGL*CTFRNT
Trigger: AGTATTCCGAAATGTACACCATAGTCCCTGCAGAGA...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp CTTTCGTGTAGATGCTTTATTTCCAGCCAAGGCTCTTCACTGAAGCTGGGATTTCATTCGCTGAATCTGTaGAAGGCTTTCCATTATTTT +
Preference number: 4 (lower is better)
Translates to: LSCRCFISSQGSSLKLGFHSLNL*KAFHYF
Trigger: AAAATAATGGAAAGCCTTCCACAGATTCAGCGAATG...AAATCCCAGCTTCAGTGAAGAGCCTTGGCTGGAAATAAAGCATCTACACGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGGTCTTCAAGTTGGGTaGTATAGGTTTTCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEGLQVG*YRFSVL
Trigger: AAGAACTGAAAACCTATACCACCCAACTTGAAGACC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAACGCCACTTTACTTTTaGTTTGTTTTAAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKTPLYF*FVLSGH
Trigger: ATGGCCACTTAAAACAAACCAAAAGTAAAGTGGCGT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATTGGCAGAGTATGCTTaGATCAACAACATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGLAEYA*INNMSA
Trigger: TGCTGACATGTTGTTGATCCAAGCATACTCTGCCAA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAAGAAGGAAGTATTTTaGCAGAGTATGCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKKKEVF*QSMLGS
Trigger: TGATCCAAGCATACTCTGCCAAAATACTTCCTTCTT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTAGCTTCATACCACATTaGCGTGACTTTTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKISFIPH*RDFSSS
Trigger: ACTAGAAGAAAAGTCACGCCAATGTGGTATGAAGCT...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTTGCCGATAACCTCCTaGAGTTTCTCCCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNLPITS*SFSQLP
Trigger: AGGGAGTTGGGAGAAACTCCAGGAGGTTATCGGCAA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGCCAAGAATCAGTCTaGATTTCTCTGGGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNRQESV*ISLGSS
Trigger: GGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACTCAGTTCTATTTCCTaGATATCAGAGGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGLSSIS*ISEGGF
Trigger: AAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTAATTCACAAAGTGCTTaGCTCTTCAGGAAACTGACA +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRNSQSA*LFRKLT
Trigger: TGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAAAATTGCCAGCTGATTaGAGTAAAACTGATTCTAAG +
Preference number: 4 (lower is better)
Translates to: GWNVLACFYNICDGHHCSKLPAD*SKTDSK
Trigger: CTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACTGAACAGAACATTTTaGTGTATAACCGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPLNRTF*CITGSS
Trigger: TGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATAGGCATGTTCTATATTaGTTCTACACTGGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYRHVLY*FYTGRY
Trigger: ATACCTTCCAGTGTAGAATCAATATAGAACATGCCT...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGCAAGCTTCTCAATATaGAAGTGCAGGATAATTGTC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGASFSI*KCRIIV
Trigger: GACAATTATCCTGCACTTTCATATTGAGAAGCTTGC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCGTGATCCTGGGAGGCTaGCAAATCTTCATCCATAAG +
Preference number: 4 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSVILGG*QIFIHK
Trigger: CTTATGGATGAAGATTTGTCAGCCTCCCAGGATCAC...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACAACCACATCATTGCTaGCTTCGACTAAGAAATTTC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPQPHHC*LRLRNF
Trigger: GAAATTTCTTAGTCGAAGTCAGCAATGATGTGGTTG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTGCTTCCTTGTGTTTTaGAATGAGTTCACCGGGGCT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNCFLVF*NEFTGA
Trigger: AGCCCCGGTGAACTCATTTCAAAACACAAGGAAGCA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCTGCTTCCTTGTGTTTTaGAATGAGTTCACCGGGGCT +
Preference number: 4 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSCFLVF*NEFTGA
Trigger: AGCCCCGGTGAACTCATTTCAAAACACAAGGAAGCA...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTGCGATCAGCATCAATaGGATGAAATCCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNCDQHQ*DEIPGW
Trigger: CCATCCAGGGATTTCATCTCATTGATGCTGATCGCA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACATTTTGCCTTCGGATaGATTCAAAACCATAAGGGA +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPHFAFG*IQNHKG
Trigger: TCCCTTATGGTTTTGAATTCATCCGAAGGCAAAATG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGATTCCTGAAAATCTCTaGGGACACAATATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEIPENL*GHNIGF
Trigger: AAAGCCAATATTGTGTCCTCAGAGATTTTCAGGAAT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTATTCCTGAAAATCTCTaGGGACACAATATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCIPENL*GHNIGF
Trigger: AAAGCCAATATTGTGTCCTCAGAGATTTTCAGGAAT...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCCTGTAAAGTATACTaGAGTTGTAGTTTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSCKVY*SCSLAS
Trigger: CGAAGCCAAACTACAACTTCAGTATACTTTACAGGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGAAGTTGTGGTCTGTTaGAAGAAATTCTTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIEVVVC*KKFFKA
Trigger: TGCTTTGAAGAATTTCTTTCAACAGACCACAACTTC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCTTCTTAAGGATGCTTTaGAGCTCCTCAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSFLRML*SSSNCS
Trigger: AGAACAATTTGAGGAGCTTCAAAGCATCCTTAAGAA...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTTTGATGAGAGTTCATaGTGCAGATATTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: AELGTEQNILVYNRQLKIFDESS*CRYCHL
Trigger: TAAGTGGCAATATCTGCATCATGAACTCTCATCAAA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCTGGAAGTTGAGTTATaGGCATTGTCCATTTTTGTT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELEVEL*ALSIFV
Trigger: AACAAAAATGGACAATGCTCATAACTCAACTTCCAG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCTTCATCTGAAGTTTaGTGCTCCACATTGTTCATC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSSSEV*CSTLFI
Trigger: GATGAACAATGTGGAGCATCAAACTTCAGATGAAGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAATACAACCCATGTATTaGGTCTGTCTTCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKIQPMY*VCLQSP
Trigger: AGGAGATTGAAGACAGACTCAATACATGGGTTGTAT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGATCTCAGCTGCTCTTaGTTTGTTGCTGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNDLSCS*FVAGLD
Trigger: ATCAAGGCCAGCAACAAATCAAGAGCAGCTGAGATC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCCAAACACAATGAGCTaGTCAATCTTGTTGGTATTT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRPNTMS*SILLVF
Trigger: AAATACCAACAAGATTGATCAGCTCATTGTGTTTGG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGCTCCCCAAACACAATaGGCTGATCAATCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNAPQTQ*ADQSCW
Trigger: CCAACAAGATTGATCAGCTCATTGTGTTTGGGGAGC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCTTCCTGTTCAGCTTaGAATGAAATATGGAGATCG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSSCSA*NEIWRS
Trigger: CGATCTCCATATTTCATTGCAAGCTGAACAGGAAGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATATCTTCCTGTTCAGCTTaGAATGAAATATGGAGATCG +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWISSCSA*NEIWRS
Trigger: CGATCTCCATATTTCATTGCAAGCTGAACAGGAAGA...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTGCCATCTTGCTTaGACTTTAGAGCATTTCTTA +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKICHLA*TLEHFL
Trigger: TAAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAAT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAGACATTTGCCATCTTaGTTGCACTTTAGAGCATTT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSRHLPS*LHFRAF
Trigger: AAATGCTCTAAAGTGCAAGCAAGATGGCAAATGTCT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTATAATGCTTTCTTCTTaGAGAGGCCTTAACACTGAT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSIMLSS*RGLNTD
Trigger: ATCAGTGTTAAGGCCTCTGCAAGAAGAAAGCATTAT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATATAATGCTTTCTTCTTaGAGAGGCCTTAACACTGAT +
Preference number: 4 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYIMLSS*RGLNTD
Trigger: ATCAGTGTTAAGGCCTCTGCAAGAAGAAAGCATTAT...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGTATCTTCACTCCTCTaGACCCTGTGGTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNVSSLL*TLWFIP
Trigger: AGGAATGAACCACAGGGTGCAGAGGAGTGAAGATAC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAGTACGCTGTCCACCTaGTTTATTTTACTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSSTLST*FILLFL
Trigger: AAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGAGCAAATTGTCCAAATaGTGTGCCGAATATCCTATA +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESKLSK*CAEYPI
Trigger: TATAGGATATTCGGCACAGCATTTGGACAATTTGCT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGATTCCACAGACTGCTaGCTAGCTAGAATGCCATCA +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNDSTDC*LARMPS
Trigger: TGATGGCATTCTAGCTAGGCAGCAGTCTGTGGAATC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATAATGCCTGATATTTaGCATGTTCTTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKIMPDI*HVLPQM
Trigger: CATTTGAGGAAGAACATGGCAAATATCAGGCATTAT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCAACTTGCTCCTGAAATaGTTCACAATTGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSNLLLK*FTIVLF
Trigger: GAAAAGGACAATTGTGAAGCATTTCAGGAGCAAGTT...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGCTTATTTTCCCATATaGTTCCTGAACAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEAYFPI*FLNNCS
Trigger: GGAACAATTGTTCAGGAAGCATATGGGAAAATAAGC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATGTTCAGCAACACTCTaGCCACTGATTTCATTCAAA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGCSATL*PLISFK
Trigger: TTTGAATGAAATCAGTGGGCAGAGTGTTGCTGAACA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAGTTCCACCATGCCTTaGAACAAAGCATCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSSTMP*NKASCW
Trigger: CCAGCAAGATGCTTTGTTGCAAGGCATGGTGGAACT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTTCTGTTACTTGTTCTaGCCAAAATGTCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRFCYLF*PKCLSV
Trigger: AACAGAGAGACATTTTGGGCAGAACAAGTAACAGAA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAATCATTTCTGTGATTaGTTTACGAGACGGCAATTT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKNHFCD*FTRRQF
Trigger: AAATTGCCGTCTCGTAAAGCAATCACAGAAATGATT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTTTCTACATCACAGGTaGTTAGCTGAAGTAATGACT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRFLHHR*LAEVMT
Trigger: AGTCATTACTTCAGCTAAGCACCTGTGATGTAGAAA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACAGCTTTCAGTATCTCCTaGAGTCTCTTCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: IKSWDTCSRNCLSFFSITAFSIS*SLFTLS
Trigger: ACTGAGAGTGAAGAGACTGCAGGAGATACTGAAAGC...TGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACACCGGCAGCTCAAAATTaGCAGCTGATTGGAGTAAAA +
Preference number: 4 (lower is better)
Translates to: IKSWDTCSRNCLSFFSITPAAQN*QLIGVK
Trigger: TTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGG...TGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTCAGATTGTCTTTGTTaGATCTATGCTTCACACTCT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESDCLC*IYASHS
Trigger: AGAGTGTGAAGCATAGATCCAACAAAGACAATCTGA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCTGGTTCCAGCAATCTaGGGATTTTTAATTCTTGTT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSLVPAI*GFLILV
Trigger: AACAAGAATTAAAAATCCCCAGATTGCTGGAACCAG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTTTTACCACATTGATCTaGACTTTCTCTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RMLLRQHSISCLADASLFFTTLI*TFSLAS
Trigger: AGAAGCTAAAGAGAAAGTCCAGATCAATGTGGTAAA...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGCCATCTTTGAAGTGTaGAAGAGAATTAGCCATTTC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPAIFEV*KRISHF
Trigger: GAAATGGCTAATTCTCTTCCACACTTCAAAGATGGC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATTTCTAGCTAAAGCTTaGCAGAACAGCTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKFLAKA*QNSSVF
Trigger: GAAAACTGAGCTGTTCTGCCAAGCTTTAGCTAGAAA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGAAAGAGTTGTTCAATTaGGCCACAGATTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEKELFN*ATDSNC
Trigger: ACAGTTTGAATCTGTGGCCCAATTGAACAACTCTTT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATTCTGTTTGTTCCAGTaGCTTAATGGCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPFCLFQ*LNGCFL
Trigger: AAGAAAGCAGCCATTAAGCCACTGGAACAAACAGAA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTTTCTGTTTGTTCCAGTaGCTTAATGGCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SSHASVRCPPALFYCFFLFCLFQ*LNGCFL
Trigger: AAGAAAGCAGCCATTAAGCCACTGGAACAAACAGAA...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAAGGCAATCATGCTTTaGTTCCCTGCCCGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNKAIML*FPARSS
Trigger: AGAAGAACGGGCAGGGAACCAAAGCATGATTGCCTT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTTCTTGAGCCTGTCCTaGGTCCTGTTCAACAATGTC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNFLSLS*VLFNNV
Trigger: GACATTGTTGAACAGGACCCAGGACAGGCTCAAGAA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCTTCTTGAGCCTGTCCTaGGTCCTGTTCAACAATGTC +
Preference number: 4 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSFLSLS*VLFNNV
Trigger: GACATTGTTGAACAGGACCCAGGACAGGCTCAAGAA...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGCCTTTCAGTTACAATaGATTCCAATTCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSAFQLQ*IPIQKG
Trigger: ACCTTTCTGAATTGGAATCCATTGTAACTGAAAGGC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGAAGGAAGTATTTTaGCAGAGTATGCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSKKEVF*QSMLGS
Trigger: TGATCCAAGCATACTCTGCCAAAATACTTCCTTCTT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCCAGTTTTGCGATCTaGCCCTCTAATTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSSFAI*PSNSGQ
Trigger: CTGTCCTGAATTAGAGGGCCAGATCGCAAAACTGGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAAGATTCCAACCACTTaGTTAACTGATCCGAATCTC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPKIPTT*LTDPNL
Trigger: GAGATTCGGATCAGTTAACCAAGTGGTTGGAATCTT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAAGATTCCAACCACTTaGTTAACTGATCCGAATCTC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGKIPTT*LTDPNL
Trigger: GAGATTCGGATCAGTTAACCAAGTGGTTGGAATCTT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGAATCAGCAATTGTCTaGTTTATAGAAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RAELGTEQNILVYNRQLKESAIV*FIETSA
Trigger: AGCTGAAGTTTCTATAAACCAGACAATTGCTGATTC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATTATTCTTCAGCTCATaGATCAGACTTCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPLFFSS*IRLLVW
Trigger: CCAAACCAGAAGTCTGATCCATGAGCTGAAGAATAA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATTATTCTTCAGCTCATaGATCAGACTTCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKLFFSS*IRLLVW
Trigger: CCAAACCAGAAGTCTGATCCATGAGCTGAAGAATAA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGTCCTCGTGAAGCTCTaGAAGAGGATCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNVLVKL*KRIFTL
Trigger: CAAAGTGAAGATCCTCTTCCAGAGCTTCACGAGGAC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACATAAACAACAGGCTTaGAAAGCTCAGACTCAATTC +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKHKQQA*KAQTQF
Trigger: GAATTGAGTCTGAGCTTTCCAAGCCTGTTGTTTATG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AATAACATGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATAAGGCCATTAAATCTTaGGACACTTGCTCCCGTAAC +
Preference number: 4 (lower is better)
Translates to: NNMHLFFSFNTVFSMSLNKAIKS*DTCSRN
Trigger: GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTT...ATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCATGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGAACCATTTCTAGGGTaGAATGTCCTCGCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNEPFLG*NVLACF
Trigger: GAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATTGCCAGCTGATTaGAGTAAAACTGATTCTAAG +
Preference number: 4 (lower is better)
Translates to: KRAELGTEQNILVYNRQLKLPAD*SKTDSK
Trigger: CTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CAA 72 bp GCCATTAAATCTTGGGACACTTGCTCCCGTAACTGTTaGAGTTTCTTCTCAATAACATGCACCTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AIKSWDTCSRNC*SFFSITCTFSS
Trigger: TGAAGAAAAGGTGCATGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
3UTR CAA 72 bp TTCAGTAAACCCATATTCCTTCAAAGAGTTGTTCAATaGGGCCACAGATTCAAACTGTTCCCTCTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: FSKPIFLQRVVQ*GHRFKLFPLSS
Trigger: GCTAGAAAGAGGGAACAGTTTGAATCTGTGGCCCAATTGAACAACTCTTTGAAGGAATATGGGTTTACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 72 bp GTTACACTGTCCAGTGGTCCTACTTTAAGACTTTCCTaGTCTGTCAACAAGGCTTTCATTGAAGATTCAACT +
Preference number: 4 (lower is better)
Translates to: VTLSSGPTLRLS*SVNKAFIEDST
Trigger: AGTTGAATCTTCAATGAAAGCCTTGTTGACAGACAAGGAAAGTCTTAAAGTAGGACCACTGGACAGTGTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAAGGCATGTTCTATATTaGTTCTACACTGGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKRHVLY*FYTGRY
Trigger: ATACCTTCCAGTGTAGAATCAATATAGAACATGCCT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCCTTGTTCTGCAATTCTaGAGGCCTCTCTCAGATTGT +
Preference number: 4 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSLVLQF*RPLSDC
Trigger: ACAATCTGAGAGAGGCCTTCAGAATTGCAGAACAAG...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATATTTTTCTTCATTGAATaGCTCCATAAAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIFFFIE*LHKGQQ
Trigger: CTGCTGTCCTTTATGGAGTCATTCAATGAAGAAAAA...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCAGCATCAATGAGATaGAATCCCTGGATGGCCATT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSASMR*NPWMAI
Trigger: AATGGCCATCCAGGGATTTCATCTCATTGATGCTGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCCTCAACCGCTATTTaGTCCACAGGCTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSSTAI*STGLSE
Trigger: TTCTGATAAGCCTGTGGATCAAATAGCGGTTGAGGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAATTCCTGAAAATCTCTaGGGACACAATATTGGCTTT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGIPENL*GHNIGF
Trigger: AAAGCCAATATTGTGTCCTCAGAGATTTTCAGGAAT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGCAGCAAGGTATTCCTaGAAATCTCTGAGGACACAA +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNAARYS*KSLRTQ
Trigger: TTGTGTCCTCAGAGATTTTCAGGAATACCTTGCTGC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGCACTTTCTGATCTGTaGAAGAATGTCATCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNALSDL*KNVIWE
Trigger: CTCCCAGATGACATTCTTTCACAGATCAGAAAGTGC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGCTTTCTCAATTCTCTaGCTTAAAATTTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGAFSIL*LKIWAL
Trigger: CAATGCCCAAATTTTAAGTCAGAGAATTGAGAAAGC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGCTTTCTCAATTCTCTaGCTTAAAATTTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKAFSIL*LKIWAL
Trigger: CAATGCCCAAATTTTAAGTCAGAGAATTGAGAAAGC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAGCTTTCTCAATTCTCTaGCTTAAAATTTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIAFSIL*LKIWAL
Trigger: CAATGCCCAAATTTTAAGTCAGAGAATTGAGAAAGC...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGAAGTTGTGGTCTGTTaGAAGAAATTCTTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKEVVVC*KKFFKA
Trigger: TGCTTTGAAGAATTTCTTTCAACAGACCACAACTTC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGAAGTTGTGGTCTGTTaGAAGAAATTCTTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGEVVVC*KKFFKA
Trigger: TGCTTTGAAGAATTTCTTTCAACAGACCACAACTTC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTGAAGTTGTGGTCTGTTaGAAGAAATTCTTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: SSHASVRCPPALFYCFFLEVVVC*KKFFKA
Trigger: TGCTTTGAAGAATTTCTTTCAACAGACCACAACTTC...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATGCCATATTTTGGAATaGAGTTGTGGTCTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGCHILE*SCGLLK
Trigger: TTTCAACAGACCACAACTTCATTCCAAAATATGGCA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATGCCATATTTTGGAATaGAGTTGTGGTCTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPCHILE*SCGLLK
Trigger: TTTCAACAGACCACAACTTCATTCCAAAATATGGCA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATTCTTAAGGATGCTTTaGAGCTCCTCAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGFLRML*SSSNCS
Trigger: AGAACAATTTGAGGAGCTTCAAAGCATCCTTAAGAA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATTCTTAAGGATGCTTTaGAGCTCCTCAAATTGTTCT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPFLRML*SSSNCS
Trigger: AGAACAATTTGAGGAGCTTCAAAGCATCCTTAAGAA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAATTGTTCCAGAGGATaGGGAAGCTCTGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNNCSRG*GSSVFF
Trigger: GAAGAAGACAGAGCTTCCTCATCCTCTGGAACAATT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACCAAACACAATGAGCTaGTCAATCTTGTTGGTATTT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGPNTMS*SILLVF
Trigger: AAATACCAACAAGATTGATCAGCTCATTGTGTTTGG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATCTTTGTTGGATCTATaGTTCACACTCTTCATGTCA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGSLLDL*FTLFMS
Trigger: TGACATGAAGAGTGTGAAGCATAGATCCAACAAAGA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTTAGCCACTTTTAGTTaGCCTGTGAATTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELATFS*PVNSSF
Trigger: AAATGAAGAATTCACAGGGCAACTAAAAGTGGCTAA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTTAGCCACTTTTAGTTaGCCTGTGAATTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSLATFS*PVNSSF
Trigger: AAATGAAGAATTCACAGGGCAACTAAAAGTGGCTAA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCCCTTTGGCAATAAGATaGTTCAAAGATTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSPLAIR*FKDSSI
Trigger: AATGGAAGAATCTTTGAAGCATCTTATTGCCAAAGG...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCATATCTTCACTTCTTaGCATAAGCTCATCAAACAT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSHIFTS*HKLIKH
Trigger: ATGTTTGATGAGCTTATGGCAAGAAGTGAAGATATG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCTGTCAGTTTAGCCTaGAGACAAGAACTACTCCTG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSVSLA*RQELLL
Trigger: CAGGAGTAGTTCTTGTCTGCAGGCTAAACTGACAGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACAAGAGGTATTTCACTaGTTTGGAGCAAAAACTGTA +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKQEVFH*FGAKTV
Trigger: TACAGTTTTTGCTCCAAAGCAGTGAAATACCTCTTG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACAAGAGGTATTTCACTaGTTTGGAGCAAAAACTGTA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGQEVFH*FGAKTV
Trigger: TACAGTTTTTGCTCCAAAGCAGTGAAATACCTCTTG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTCAAGAGGTATTTCACTaGTTTGGAGCAAAAACTGTA +
Preference number: 4 (lower is better)
Translates to: SSHASVRCPPALFYCFFLQEVFH*FGAKTV
Trigger: TACAGTTTTTGCTCCAAAGCAGTGAAATACCTCTTG...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCAGTGGCTTAATGGCTaGTTTCTTTGCTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNQWLNG*FLCFQL
Trigger: CAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCTTCAAAGTAATAAGTaGCTGAAGCAAATTGTCCAA +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSLQSNK*LKQIVQ
Trigger: TTGGACAATTTGCTTCAGGCACTTATTACTTTGAAG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCCTTCAAAGTAATAAGTaGCTGAAGCAAATTGTCCAA +
Preference number: 4 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCLQSNK*LKQIVQ
Trigger: TTGGACAATTTGCTTCAGGCACTTATTACTTTGAAG...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAACTTGCTCCTGAAATaGTTCACAATTGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPNLLLK*FTIVLF
Trigger: GAAAAGGACAATTGTGAAGCATTTCAGGAGCAAGTT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAAATACTACACATTTCTaGCCAAACTTGCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWINTTHF*PNLLLK
Trigger: TTTCAGGAGCAAGTTTGGGCAGAAATGTGTAGTATT...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACATTCAAGACATTTGTaGGCAAATCAATGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPHSRHL*ANQCLC
Trigger: ACACAAGCATTGATTTGCGCACAAATGTCTTGAATG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATACATTCAAGACATTTGTaGGCAAATCAATGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIHSRHL*ANQCLC
Trigger: ACACAAGCATTGATTTGCGCACAAATGTCTTGAATG...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTGAATGTAAAAGATTGTaGTTCTGTTCTGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCECKRL*FCSESS
Trigger: GGAAGATTCAGAACAGAAGCACAATCTTTTACATTC...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGCTTATTTTCCCATATaGTTCCTGAACAATTGTTCC +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGAYFPI*FLNNCS
Trigger: GGAACAATTGTTCAGGAAGCATATGGGAAAATAAGC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTGTTCCAGCACCTGCTaGATGTCTGCGTTTAATGTT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNCSSTC*MSAFNV
Trigger: AACATTAAACGCAGACATGCAGCAGGTGCTGGAACA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCACCAGTTCCACCATaGCTTGCAACAAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSPVPP*LATKHL
Trigger: AAGATGCTTTGTTGCAAGGCATGGTGGAACTGGTGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATTTCTACATCACAGGTaGTTAGCTGAAGTAATGACT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGFLHHR*LAEVMT
Trigger: AGTCATTACTTCAGCTAAGCACCTGTGATGTAGAAA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACATTCTTTCATAGCGCTTaGTTTCTACATCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: IKSWDTCSRNCLSFFSITFFHSA*FLHHRC
Trigger: GCACCTGTGATGTAGAAAGCAAGCGCTATGAAAGAA...TGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGCTTTCAGTATCTCCTaGAGTCTCTTCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNAFSIS*SLFTLS
Trigger: ACTGAGAGTGAAGAGACTGCAGGAGATACTGAAAGC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp ATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACAAAATCTTGGGACACTTaGTCCCGTAACTGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: IKSWDTCSRNCLSFFSITKSWDT*SRNCLS
Trigger: ACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTT...TGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTGGAATGTCCTCGCTTaGTTCTATAATATATGTGAT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSWNVLA*FYNICD
Trigger: ATCACATATATTATAGAAGCAAGCGAGGACATTCCA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGAAGAGACTCCCATTTaGCACAGACATCTCTACTCT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNEETPI*HRHLYS
Trigger: AGAGTAGAGATGTCTGTGCCAAATGGGAGTCTCTTC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTTTGTTGTTTTGCAGGTaGTGTTCAAGAATATCTCTG +
Preference number: 4 (lower is better)
Translates to: SSHASVRCPPALFYCFFLLLFCR*CSRISL
Trigger: CAGAGATATTCTTGAACACCACCTGCAAAACAACAA...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTGTCTCAGTAATGTCTaGTATCTATCCATCAAACAT +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSCLSNV*YLSIKH
Trigger: ATGTTTGATGGATAGATACCAGACATTACTGAGACA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTGTCTCAGTAATGTCTaGTATCTATCCATCAAACAT +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRCLSNV*YLSIKH
Trigger: ATGTTTGATGGATAGATACCAGACATTACTGAGACA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTTGTCTCAGTAATGTCTaGTATCTATCCATCAAACAT +
Preference number: 4 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCCLSNV*YLSIKH
Trigger: ATGTTTGATGGATAGATACCAGACATTACTGAGACA...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTACTTGGGTTTGTAATTaGTCAAGTTGTGAAAAATCC +
Preference number: 4 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRTWVCN*SSCEKS
Trigger: GGATTTTTCACAACTTGACCAATTACAAACCCAAGT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCACTTGGGTTTGTAATTaGTCAAGTTGTGAAAAATCC +
Preference number: 4 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCTWVCN*SSCEKS
Trigger: GGATTTTTCACAACTTGACCAATTACAAACCCAAGT...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCACTGAAGTTGTAGTTTaGCTTCGGGGCTGGATATCA +
Preference number: 4 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSTEVVV*LRGWIS
Trigger: TGATATCCAGCCCCGAAGCCAAACTACAACTTCAGT...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATGGAATGCCATATTTTaGAATGAAGTTGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPWNAIF*NEVVVC
Trigger: ACAGACCACAACTTCATTCCAAAATATGGCATTCCA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACCAGCTCATTTAGTTTaGAATGCCATAGATCTAACT +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGPAHLV*NAIDLT
Trigger: AGTTAGATCTATGGCATTCCAAACTAAATGAGCTGG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAATCTTCTCCAAAAGTTaGATCCACTTTTCACAGCAA +
Preference number: 4 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPIFSKS*IHFSQQ
Trigger: TTGCTGTGAAAAGTGGATCCAACTTTTGGAGAAGAT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGAAATTGCCAGCTGATTaGAGTAAAACTGATTCTAAG +
Preference number: 4 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEKLPAD*SKTDSK
Trigger: CTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAATTGCCAGCTGATTaGAGTAAAACTGATTCTAAG +
Preference number: 4 (lower is better)
Translates to: WCITGSSKLPADWSKTDSKLPAD*SKTDSK
Trigger: CTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAGTGGCCATCCGAAATaGATTTACCAGAAGACGCTT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSGHPK*IYQKTL
Trigger: AAGCGTCTTCTGGTAAATCCATTTCGGATGGCCACT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358025.7
ENST00000458046.6
ENST00000555002.6
3UTR CAA 72 bp TTCCTGCAGTTTCTGCAATTTTTCCTCAACCGCTATTaGATCCACAGGCTTATCAGAAAAACTGACAAATTC +
Preference number: 4 (lower is better)
Translates to: FLQFLQFFLNRY*IHRLIRKTDKF
Trigger: GAATTTGTCAGTTTTTCTGATAAGCCTGTGGATCAAATAGCGGTTGAGGAAAAATTGCAGAAACTGCAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCTGTTCAGCTTGCAATaGAATATGGAGATCGTCGAT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNLFSLQ*NMEIVD
Trigger: ATCGACGATCTCCATATTTCATTGCAAGCTGAACAG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCAGATCCCGTTTTATTaGCAGGACATCCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNQIPFY*QDIQKG
Trigger: TCCTTTTTGGATGTCCTGTCAATAAAACGGGATCTG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAGCCCTCATCATATATaGTTCAAGTTCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSPHHI*FKFLLG
Trigger: TCCCAGAAGGAACTTGAATCATATATGATGAGGGCT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCATTTGTTTTCCTCAGTaGATTCCTCCTGTACCCCAT +
Preference number: 4 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSICFPQ*IPPVPH
Trigger: ATGGGGTACAGGAGGAATTCACTGAGGAAAACAAAT...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCTCTTGCAATTCCTTCTaGGATGCCTCCAAAGTAACA +
Preference number: 4 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSSCNSF*DASKVT
Trigger: TGTTACTTTGGAGGCATCTCAGAAGGAATTGCAAGA...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp ATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACACCGATCCGTCAGCTTTaGGAATTCTGTAATAAATTC +
Preference number: 4 (lower is better)
Translates to: IKSWDTCSRNCLSFFSITPIRQL*EFCNKF
Trigger: GAATTTATTACAGAATTCTCAAAGCTGACGGATCGG...TGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAATTTGCCATCTTGCTTaGACTTTAGAGCATTTCTTA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGICHLA*TLEHFL
Trigger: TAAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAAT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATTAGCCACTTTTAGTTaGCCTGTGAATTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKLATFS*PVNSSF
Trigger: AAATGAAGAATTCACAGGGCAACTAAAAGTGGCTAA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACATATCTTCACTTCTTaGCATAAGCTCATCAAACAT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKHIFTS*HKLIKH
Trigger: ATGTTTGATGAGCTTATGGCAAGAAGTGAAGATATG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACTTCAAAGTAATAAGTaGCTGAAGCAAATTGTCCAA +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGLQSNK*LKQIVQ
Trigger: TTGGACAATTTGCTTCAGGCACTTATTACTTTGAAG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTGTAGATGTTGCTGCTaGTGTTGCAGAGAAATCTCA +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNCRCCC*CCREIS
Trigger: TGAGATTTCTCTGCAACAGCAGCAGCAACATCTACA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAATAATGCCTGATATTTaGCATGTTCTTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: EPFLGWNVLACFYNICDGIMPDI*HVLPQM
Trigger: CATTTGAGGAAGAACATGGCAAATATCAGGCATTAT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATGGAATTATCAGAGGTaGTTATTTTCCCATATGCTT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKWNYQR*LFSHML
Trigger: AAGCATATGGGAAAATAAGCACCTCTGATAATTCCA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAAATCATTTCTGTGATTaGTTTACGAGACGGCAATTT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKNHFCD*FTRRQF
Trigger: AAATTGCCGTCTCGTAAAGCAATCACAGAAATGATT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAAATCTTGGGACACTTaGTCCCGTAACTGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNKSWDT*SRNCLS
Trigger: ACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTAGATTTTTGCAGACCTaGTTTATCTTGTCTACAACT +
Preference number: 4 (lower is better)
Translates to: SSHASVRCPPALFYCFFLRFLQT*FILSTT
Trigger: AGTTGTAGACAAGATAAACCAGGTCTGCAAAAATCT...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAGATCATTAAAGCTCTaGTCCTCTGTGGGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNRSLKL*SSVGSN
Trigger: GTTACTACCCACAGAGGACCAGAGCTTTAATGATCT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCTCTGCAGGGACTATaGTGTACATTTCGGAATACT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSLQGL*CTFRNT
Trigger: AGTATTCCGAAATGTACACCATAGTCCCTGCAGAGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCTGGCCAGCAAATGACTaGTATTTTCTATCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSWPAND*YFLSKP
Trigger: AGGCTTGGATAGAAAATACCAGTCATTTGCTGGCCA...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCATGTTGGCAATACTaGGGCCACATTTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSCWQY*GHIFLA
Trigger: TGCTAAGAAAATGTGGCCCCAGTATTGCCAACATGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGAATCAGCAATTGTCTaGTTTATAGAAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RTFWCITGSSKLPADWSKESAIV*FIETSA
Trigger: AGCTGAAGTTTCTATAAACCAGACAATTGCTGATTC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGTCTCTACAGTGCTCTaGAACTGCTTAATCATCTCT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNVSTVL*NCLIIS
Trigger: AGAGATGATTAAGCAGTTCCAGAGCACTGTAGAGAC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACATTTTCTTTTCACACTaGTCCCAGGTCTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNIFFSH*SQVSTV
Trigger: CACTGTAGAGACCTGGGACCAGTGTGAAAAGAAAAT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAATGTAATTTCCTGTTaGAAGCCATTCAGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNNVISC*KPFSWR
Trigger: GCGCCAACTGAATGGCTTCCAACAGGAAATTACATT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
3UTR CAA 72 bp TCCTCTTCACTAGAGAAATCAGAAGTAATCCTGAATTaGTTGTTTTGCAGGTGGTGTTCAAGAATATCTCTG +
Preference number: 4 (lower is better)
Translates to: SSSLEKSEVILN*LFCRWCSRISL
Trigger: CAGAGATATTCTTGAACACCACCTGCAAAACAACAAATTCAGGATTACTTCTGATTTCTCTAGTGAAGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 72 bp CTGGCTCTTCTAAGCGGTTACATATTTCAATCTGTTTaGCTATGGAATCTTGGATATTCCTTAGGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: LALLSGYIFQSV*LWNLGYSLGVD
Trigger: ATCAACACCTAAGGAATATCCAAGATTCCATAGCAAAACAGATTGAAATATGTAACCGCTTAGAAGAGCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 72 bp TGTAGATCAAATGGGTGTAACTCCTTTAATACAAAGTaGCCTGGCTCTTCTAAGCGGTTACATATTTCAATC +
Preference number: 4 (lower is better)
Translates to: CRSNGCNSFNTK*PGSSKRLHISI
Trigger: GATTGAAATATGTAACCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGGAGTTACACCCATTTGATCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAGGAGAATGTTCGAATaGTGCTCAAATCTATCCATC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNRRMFE*CSNLSI
Trigger: GATGGATAGATTTGAGCATCATTCGAACATTCTCCT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCCTCAAGTGGCATTTTaGCTTCGGATGAATTCAAAA +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNPQVAF*LRMNSK
Trigger: TTTTGAATTCATCCGAAGGCAAAATGCCACTTGAGG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAATTCTTCCCATTTCTaGAACAAACTCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNNSSHF*NKLCSF
Trigger: GAAGCTGCAGAGTTTGTTGCAGAAATGGGAAGAATT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AATAACATGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATTTTCTACATCACAGGTaGTTAGCTGAAGTAATGACT +
Preference number: 4 (lower is better)
Translates to: NNMHLFFSFNTVFSMSLNFLHHR*LAEVMT
Trigger: AGTCATTACTTCAGCTAAGCACCTGTGATGTAGAAA...ATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCATGTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGTTAGGTGGTACCAATaGCAAGTGATTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNVRWYQ*QVIFIL
Trigger: AAGGATGAAAATCACTTGCCATTGGTACCACCTAAC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCCTCCAATTTGTTAGGTaGTACCAATGGCAAGTGATT +
Preference number: 4 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSLQFVR*YQWQVI
Trigger: AATCACTTGCCATTGGTACCACCTAACAAATTGGAG...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCGCCATCTTTGAAGTGTaGAAGAGAATTAGCCATTTC +
Preference number: 4 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSAIFEV*KRISHF
Trigger: GAAATGGCTAATTCTCTTCCACACTTCAAAGATGGC...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGGTCTTCAAGTTGGGTaGTATAGGTTTTCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNGLQVG*YRFSVL
Trigger: AAGAACTGAAAACCTATACCACCCAACTTGAAGACC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTTTTTCTTCATTGAATaGCTCCATAAAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNFFFIE*LHKGQQ
Trigger: CTGCTGTCCTTTATGGAGTCATTCAATGAAGAAAAA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGCTTTCTCAATTCTCTaGCTTAAAATTTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNAFSIL*LKIWAL
Trigger: CAATGCCCAAATTTTAAGTCAGAGAATTGAGAAAGC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR TCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTGCCATATTTTGGAATaGAGTTGTGGTCTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNCHILE*SCGLLK
Trigger: TTTCAACAGACCACAACTTCATTCCAAAATATGGCA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAGTACGCTGTCCACCTaGTTTATTTTACTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSTLST*FILLFL
Trigger: AAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACATTGTCCAAATGCTGTaGCGAATATCCTATATTGTG +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNIVQML*RISYIV
Trigger: CACAATATAGGATATTCGGCACAGCATTTGGACAAT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR GCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTTCTGTTACTTGTTCTaGCCAAAATGTCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNFCYLF*PKCLSV
Trigger: AACAGAGAGACATTTTGGGCAGAACAAGTAACAGAA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAAAGAGTTGTTCAATTaGGCCACAGATTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNKELFN*ATDSNC
Trigger: ACAGTTTGAATCTGTGGCCCAATTGAACAACTCTTT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
3UTR CAA 72 bp ACTAGAGAAATCAGAAGTAATCCTGAATTTGTTGTTTaGCAGGTGGTGTTCAAGAATATCTCTGTATGTATC +
Preference number: 4 (lower is better)
Translates to: TREIRSNPEFVV*QVVFKNISVCI
Trigger: GATACATACAGAGATATTCTTGAACACCACCTGCAAAACAACAAATTCAGGATTACTTCTGATTTCTCTAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
3UTR CAA 72 bp TCTTCACTAGAGAAATCAGAAGTAATCCTGAATTTGTaGTTTTGCAGGTGGTGTTCAAGAATATCTCTGTAT +
Preference number: 4 (lower is better)
Translates to: SSLEKSEVILNL*FCRWCSRISLY
Trigger: ATACAGAGATATTCTTGAACACCACCTGCAAAACAACAAATTCAGGATTACTTCTGATTTCTCTAGTGAAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR GCA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCTTAGCCACTTTTAGTTaGCCTGTGAATTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSLATFS*PVNSSF
Trigger: AAATGAAGAATTCACAGGGCAACTAAAAGTGGCTAA...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CCA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTTTACCACATTGATCTaGACTTTCTCTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KQYKRAELGTEQNILVYNFTTLI*TFSLAS
Trigger: AGAAGCTAAAGAGAAAGTCCAGATCAATGTGGTAAA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTTTGTCCCAGCGCTGGTaGCCCTCGTGGACCATCTGC +
Preference number: 5 (lower is better)
Translates to: AGGWSPESTSSKLGRGEALSQRW*PSWTIC
Trigger: GCAGATGGTCCACGAGGGCAACCAGCGCTGGGACAA...AGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTACTCGCGGGCCTTCTTaGCCACCATCCGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: AGGWSPESTSSKLGRGEATRGPS*PPSVPG
Trigger: TCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGT...AGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGAGCTGGCACGGATGTaGCAGGAGGCTGGTCCCCCG +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAELARM*QEAGPP
Trigger: CGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGGAGGTGAGCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCACTGCCCGGACCACCCTaGAGAGGAAGGAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: AGGEPPVEPGDPSKHLLALPGPP*RGRSAV
Trigger: CACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAG...TGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGCTCACCTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGCTGGACTCTGCGGGTaGTGGGAGTCGATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGAGLCG*WESIQD
Trigger: GTCCTGGATCGACTCCCACAACCCGCAGAGTCCAGC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGGTGGAGCTGGACTCTGCGGGTaGTGGGAGTCGATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: AAGGTGRPFQTPPGSSGGAGLCG*WESIQD
Trigger: GTCCTGGATCGACTCCCACAACCCGCAGAGTCCAGC...TCCACCGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGTCCCAGCGCTGGTaGCCCTCGTGGACCATCTGC +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTLSQRW*PSWTIC
Trigger: GCAGATGGTCCACGAGGGCAACCAGCGCTGGGACAA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCTGCCCGGACCACCCTaGAGAGGAAGGAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPLPGPP*RGRSAV
Trigger: CACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGGGCTCCAAACCTCCTaGCGCGTCAGAAGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGGLQTS*RVRRVQ
Trigger: CTGGACTCTTCTGACGCGCAAGGAGGTTTGGAGCCC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCACGTGCTGGGCACCCTaGGCAATCAGGCAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPTCWAP*AIRQVV
Trigger: CACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCTGGATCGCGCCTTTaGCTCGCTCTCCCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSGSRL*LALPLA
Trigger: AGCGAGAGGGAGAGCGAGCAAAAGGCGCGATCCAGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGCTGGACTCTGCGGGTaGTGGGAGTCGATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCAGLCG*WESIQD
Trigger: GTCCTGGATCGACTCCCACAACCCGCAGAGTCCAGC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTTGTCCCAGCGCTGGTaGCCCTCGTGGACCATCTGC +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCLSQRW*PSWTIC
Trigger: GCAGATGGTCCACGAGGGCAACCAGCGCTGGGACAA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGCATGAGCGACTGTCGTAAGCCCCCTCTCCAGCTGTCCACTGCGCCCTGTGCTACTCGCGGGCCTTCTTaGCCACCATCCGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: CMSDCRKPPLQLSTAPCATRGPS*PPSVPG
Trigger: TCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGT...AGCACAGGGCGCAGTGGACAGCTGGAGAGGGGGCTTACGACAGTCGCTCATGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCTTCCTGCTGTGGGTaGCCATTCAGGACTCGCGGG +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSSCCG*PFRTRG
Trigger: CCCGCGAGTCCTGAATGGCAACCCACAGCAGGAAGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCTGCCCGGACCACCCTaGAGAGGAAGGAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: ACSDARDRKGCREHATSGLPGPP*RGRSAV
Trigger: CACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAG...GCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTGCCCGGACCACCCTaGAGAGGAAGGAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTLPGPP*RGRSAV
Trigger: CACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTACGTGCTGGGCACCCTaGGCAATCAGGCAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCTCWAP*AIRQVV
Trigger: CACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 90 bp CAGAGTGCCAGGACGCCCTCCTTCCCTTCTACATCCCAAGCGACCTaGTGCCAGGGGTTCATCCCCAAACTGCAATGGCAGCAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: QSARTPSFPSTSQAT*CQGFIPKLQWQQRA
Trigger: GGCCCTCTGCTGCCATTGCAGTTTGGGGATGAACCCCTGGCAGCAGGTCGCTTGGGATGTAGAAGGGAAGGAGGGCGTCCTGGCACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS CCA 90 bp ACTGCCACGTTGGCTTGTTGCAGCCACAGCTCCAGCTCGGCCACCTaGGTCTTGCAGGCATGCAGGACTTCTGTGGGCTCCGGCCTAGTT +
Preference number: 5 (lower is better)
Translates to: TATLACCSHSSSSAT*VLQACRTSVGSGLV
Trigger: AACTAGGCCGGAGCCCACAGAAGTCCTGCATGCCTGCAAGACCCAGGTGGCCGAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553308.1
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
ENST00000673869.1
CDS CCA 90 bp GAGTGGCGTTTTGGAGCCAGGGTCTCGAGTGGTAGGGACACTGAGTaGCAAGGCCGGGTCTGGGGACCAAGATGGCAGAAGGCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: EWRFGARVSSGRDTE*QGRVWGPRWQKASQ
Trigger: CTGAGAGGCCTTCTGCCATCTTGGTCCCCAGACCCGGCCTTGCCACTCAGTGTCCCTACCACTCGAGACCCTGGCTCCAAAACGCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCATCCCGATCTGGGTCTaGGCTTGGTCGAGATCCTCC +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPIPIWV*AWSRSS
Trigger: GGAGGATCTCGACCAAGCCAAGACCCAGATCGGGAT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCGGGCTCCAAACCTCCTaGCGCGTCAGAAGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPGLQTS*RVRRVQ
Trigger: CTGGACTCTTCTGACGCGCAAGGAGGTTTGGAGCCC...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTCGGCCACCTGGGTCTaGCAGGCATGCAGGACTTCT +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPSATWV*QACRTS
Trigger: AGAAGTCCTGCATGCCTGCAAGACCCAGGTGGCCGA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGGCTCAACTGCCACGTaGGCTTGTTGCAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCGSTAT*ACCSHS
Trigger: GCTGTGGCTGCAACAAGCCAACGTGGCAGTTGAGCC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCTTCATCTCTTAGTTaGGCCACTCGGCTCTCGGCG +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWPSSLS*ATRLSA
Trigger: CGCCGAGAGCCGAGTGGCCAAACTAAGAGATGAAGG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGACACCTCTGAGGAATTaGGGCAGGCTGCCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWTPLRN*GRLPSS
Trigger: AGAGGACGGCAGCCTGCCCAAATTCCTCAGAGGTGT...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAACTCGCGGGCCTTCTTaGCCACCATCCGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTTRGPS*PPSVPG
Trigger: TCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTCTTCCTGCTGTGGGTaGCCATTCAGGACTCGCGGG +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSSCCG*PFRTRG
Trigger: CCCGCGAGTCCTGAATGGCAACCCACAGCAGGAAGA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCTGGCGGAGTCTACTTaGGAGCTCTGTGGATTCGGG +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWLAEST*ELCGFG
Trigger: CCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCTGGCGGAGTCTACTTaGGAGCTCTGTGGATTCGGG +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPLAEST*ELCGFG
Trigger: CCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGCGGTGGAGTTCCTCCAGCTCATCCTCAATCAGCACAGCATCCAGGGGCTCGCACGTGCTGGGCACCCTaGGCAATCAGGCAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SGGVPPAHPQSAQHPGARTCWAP*AIRQVV
Trigger: CACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGT...GCGAGCCCCTGGATGCTGTGCTGATTGAGGATGAGCTGGAGGAACTCCACCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCACAGGTCCCGGGACCTaGCCAACACTAAGTCACTCA +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTTGPGT*PTLSHS
Trigger: TGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCTGGGTAAAGAAACTTaGCTCGGGGAGCTGGCACGG +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLALGKET*LGELAR
Trigger: CCGTGCCAGCTCCCCGAGCAAAGTTTCTTTACCCAG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS TCA 90 bp CAGCAGCTGGGGGCAGGCTGTGGTTTAGGCAGCCCTTGCCAGAGGTaGGGGGAAGCTGGCTACTTAGAGGAAGTCATTTCAGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: QQLGAGCGLGSPCQR*GEAGYLEEVISAAP
Trigger: GGGGGCTGCTGAAATGACTTCCTCTAAGTAGCCAGCTTCCCCTCACCTCTGGCAAGGGCTGCCTAAACCACAGCCTGCCCCCAGCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS GCA 90 bp AGTTCTCACTGCTCTGAACTTTGCTCGGGGAGCTGGCACGGATGTTaGAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: SSHCSELCSGSWHGC*RRLVPRVYLVEAGQ
Trigger: CTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGTTCAGAGCAGTGAGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358025.7
ENST00000441438.2
ENST00000555002.6
CDS CCA 90 bp GGCAGGCTGTGGTTTAGGCAGCCCTTGCCAGAGGTGAGGGGAAGCTaGCTACTTAGAGGAAGTCATTTCAGCAGCCCCCAGGCTCGCTGC +
Preference number: 5 (lower is better)
Translates to: GRLWFRQPLPEVRGS*LLRGSHFSSPQARC
Trigger: GCAGCGAGCCTGGGGGCTGCTGAAATGACTTCCTCTAAGTAGCCAGCTTCCCCTCACCTCTGGCAAGGGCTGCCTAAACCACAGCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTATCAGAGTCACGGCTaGAGAGTGATCCTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPYQSHG*RVILGG
Trigger: GCCTCCCAGGATCACTCTCAAGCCGTGACTCTGATA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCAAGGCAATCATGCTTaGGTTCCCTGCCCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTQGNHA*VPCPFF
Trigger: GAAGAACGGGCAGGGAACCAAAGCATGATTGCCTTG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCGGCCACCTGGGTCTaGCAGGCATGCAGGACTTCT +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSATWV*QACRTS
Trigger: AGAAGTCCTGCATGCCTGCAAGACCCAGGTGGCCGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATGCCACGTTGGCTTGTaGCAGCCACAGCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGCHVGL*QPQLQL
Trigger: GAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTGCCACGTTGGCTTGTaGCAGCCACAGCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWCHVGL*QPQLQL
Trigger: GAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGGCTCAACTGCCACGTaGGCTTGTTGCAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTGSTAT*ACCSHS
Trigger: GCTGTGGCTGCAACAAGCCAACGTGGCAGTTGAGCC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGCCTTCGTTCAGAGTTaGGTAAAGCCGGGCGTGTTT +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTAFVQS*VKPGVF
Trigger: AAACACGCCCGGCTTTACCAAACTCTGAACGAAGGC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGACGCCACCAACTGTTaGCCTTCGTTCAGAGTTTGG +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGDATNC*PSFRVW
Trigger: CCAAACTCTGAACGAAGGCAAACAGTTGGTGGCGTC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACCTGCTGCTTCAGCCTaGCGGCAGCTTCACCATGAG +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTPAASA*RQLHHE
Trigger: CTCATGGTGAAGCTGCCGCAAGGCTGAAGCAGCAGG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCGAGCTGTTGAAACTTaGCTTCCTGCTGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGRAVET*LPAASA
Trigger: GGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTCG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAGAAGTAGTGAAATCTaGCCACTGCCTCACCAGCCC +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTRSSEI*PLPHQP
Trigger: GGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTCT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCCGCCGGTGGAACCGGGAGACCCTTCCAAACACCTCCTGGCAGTAGCGGTGGACCAGCTGTCCTGAAGTaGACTGATTCTCCTACCCAC +
Preference number: 5 (lower is better)
Translates to: AAGGTGRPFQTPPGSSGGPAVLK*TDSPTH
Trigger: GTGGGTAGGAGAATCAGTCAACTTCAGGACAGCTGG...TCCACCGCTACTGCCAGGAGGTGTTTGGAAGGGTCTCCCGGTTCCACCGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCACACTCGGTCTCATTaGCACAGGCATCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAHTRSH*HRHRSR
Trigger: ACGACTCCGATGCCTGTGCAAATGAGACCGAGTGTG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTACACCTCTGAGGAATTaGGGCAGGCTGCCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGTPLRN*GRLPSS
Trigger: AGAGGACGGCAGCCTGCCCAAATTCCTCAGAGGTGT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAACTCGCGGGCCTTCTTaGCCACCATCCGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLATRGPS*PPSVPG
Trigger: TCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTCCTTGCTGCTCACGTaGACAGAGACCACTAATGCC +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSLLLT*TETTNA
Trigger: GGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGGA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTCGGGGCTCTCGGTTaGCAGAAATTCCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTFGALG*QKFLAA
Trigger: AGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGAA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCTGGCGGAGTCTACTTaGGAGCTCTGTGGATTCGGG +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGLAEST*ELCGFG
Trigger: CCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCCATGTCCACTTGAGGTaGACGTTCTACCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSHVHLR*TFYQLL
Trigger: AAGGAGCTGGTAGAACGTCAACCTCAAGTGGACATG...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCACTAAGTCACTCAGATaGGTCTGGGGCCACGTGCTG +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLATKSLR*VWGHVL
Trigger: CAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCACTAAGTCACTCAGATaGGTCTGGGGCCACGTGCTG +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPTKSLR*VWGHVL
Trigger: CAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCACAGGTCCCGGGACCTaGCCAACACTAAGTCACTCA +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLATGPGT*PTLSHS
Trigger: TGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 90 bp AACTGCTGGGTAAAGAAACTTTGCTCGGGGAGCTGGCACGGATGTTaGAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: NCWVKKLCSGSWHGC*RRLVPRVYLVEAGQ
Trigger: CTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGTTTCTTTACCCAGCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS GCA 90 bp CCGCTGAAAGGCCTGCATCACATGGGAGGGGTCAGAGCCAAAGCATaGAGAGTGCCAGGACGCCCTCCTTCCCTTCTACATCCCAAGCGA +
Preference number: 5 (lower is better)
Translates to: PLKGLHHMGGVRAKA*RVPGRPPSLLHPKR
Trigger: TCGCTTGGGATGTAGAAGGGAAGGAGGGCGTCCTGGCACTCTGCATGCTTTGGCTCTGACCCCTCCCATGTGATGCAGGCCTTTCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS CCA 90 bp CTATGGAAAGGACCCGTGTGGCCAGTGGAAGCACAGCTGCACAAGTaGTCCCAAGGCCAAGTGACGGTTCGCTGTATGCCACGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: LWKGPVWPVEAQLHK*SQGQVTVRCMPRGH
Trigger: GTGGCCACGTGGCATACAGCGAACCGTCACTTGGCCTTGGGACCACTTGTGCAGCTGTGCTTCCACTGGCCACACGGGTCCTTTCCATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCTCATAGGTGGCGCATaGTTCCTGAGCCCACAAAAG +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWLIGGA*FLSPQK
Trigger: CTTTTGTGGGCTCAGGAACAATGCGCCACCTATGAG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGATCCCGATCTGGGTCTaGGCTTGGTCGAGATCCTCC +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWIPIWV*AWSRSS
Trigger: GGAGGATCTCGACCAAGCCAAGACCCAGATCGGGAT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCGTGTTGTCCCACTGGTaGCTGATGTCAGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPVLSHW*LMSVRV
Trigger: GACCCTCACTGACATCAGCAACCAGTGGGACAACAC...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCCCTCTTCTGTTTGGTaGGGCCTTAGGGAACATTCT +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGPSSVW*GLREHS
Trigger: AGAATGTTCCCTAAGGCCCAACCAAACAGAAGAGGG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGGGCTCCAAACCTCCTaGCGCGTCAGAAGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAGLQTS*RVRRVQ
Trigger: CTGGACTCTTCTGACGCGCAAGGAGGTTTGGAGCCC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCATTCAAGGAGCAAGTaGGTGTTCTCGCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWHSRSK*VFSPGQ
Trigger: TTGGCCTGGCGAGAACACCAACTTGCTCCTTGAATG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCAGTTCCACCATGCCTaGCAACAAAGCATCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTQFHHA*QQSILL
Trigger: CAGCAAGATGCTTTGTTGCAAGGCATGGTGGAACTG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCGAGCTGTTGAAACTTaGCTTCCTGCTGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPRAVET*LPAASA
Trigger: GGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTCG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGCTGGCGGAGTCTACTTTGGAGCTCTGTGGATTCGGGGCTCTCGGTTTGCAGAGCTGGACTCTGCGGGTaGTGGGAGTCGATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: SWRSLLWSSVDSGLSVCRAGLCG*WESIQD
Trigger: GTCCTGGATCGACTCCCACAACCCGCAGAGTCCAGC...TCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGATCAGACTTCTGGTTaGGTAGAGGCTGAAGCGCTC +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLADQTSG*VEAEAL
Trigger: GAGCGCTTCAGCCTCTACCAAACCAGAAGTCTGATC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGATTTGTTGCTGGCCTaGATCAACTGGTCACCCATC +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGDLLLA*INWSPI
Trigger: GATGGGTGACCAGTTGATCAAGGCCAGCAACAAATC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGCTGCTCTTGATTTGTaGCTGGCCTTGATCAACTGG +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGAALDL*LALINW
Trigger: CCAGTTGATCAAGGCCAGCAACAAATCAAGAGCAGC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAACACCTCTGAGGAATTaGGGCAGGCTGCCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGTPLRN*GRLPSS
Trigger: AGAGGACGGCAGCCTGCCCAAATTCCTCAGAGGTGT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCTCTTCAGTTCCTCTTaGGCACTCGTGTACAACACC +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTLFSSS*ALVYNT
Trigger: GGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGAG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTTCGGGGCTCTCGGTTaGCAGAAATTCCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWFGALG*QKFLAA
Trigger: AGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGAA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCTCTGAGGAGCTGGCACGGATGTaGCAGGAGGCTGGTCCCCCG +
Preference number: 5 (lower is better)
Translates to: SCWKPFSWRILSSASLSEELARM*QEAGPP
Trigger: CGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTC...CTCAGAGAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTACTAAGTCACTCAGATaGGTCTGGGGCCACGTGCTG +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGTKSLR*VWGHVL
Trigger: CAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACAGGTCCCGGGACCTaGCCAACACTAAGTCACTCA +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSTGPGT*PTLSHS
Trigger: TGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS TCA 90 bp GCCAAACGGGTCACTTTCCAGGGTGCTGGGAACCCAGCTGTTACCTaGCAGTGCGCTGTAGTATGGGCCCTCCTCGTCCTCTTCGTGAGA +
Preference number: 5 (lower is better)
Translates to: AKRVTFQGAGNPAVT*QCAVVWALLVLFVR
Trigger: TCTCACGAAGAGGACGAGGAGGGCCCATACTACAGCGCACTGTCAGGTAACAGCTGGGTTCCCAGCACCCTGGAAAGTGACCCGTTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557307.1
CDS GCA 90 bp CACCTGGCTACATGGGCGTTCAGCCCATCAACGTCACCCTTCCTCTaGCGAACACCCTGGACAGCATTCTGCCACCGATCCGTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: HLATWAFSPSTSPFL*RTPWTAFCHRSVSF
Trigger: AAAGCTGACGGATCGGTGGCAGAATGCTGTCCAGGGTGTTCGGCAGAGGAAGGGTGACGTTGATGGGCTGAACGCCCATGTAGCCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS CCA 90 bp CAGGGGGCCCGGGAGGAGCATGTGGGTGCTGGACTCTGCGGGTTGTaGGAGTCGATCCAGGACACTGGAATTTTGGAGAAAGGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: QGAREEHVGAGLCGL*ESIQDTGILEKGFF
Trigger: AAAGAAGCCTTTCTCCAAAATTCCAGTGTCCTGGATCGACTCCCACAACCCGCAGAGTCCAGCACCCACATGCTCCTCCCGGGCCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCTCATAGGTGGCGCATaGTTCCTGAGCCCACAAAAG +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPLIGGA*FLSPQK
Trigger: CTTTTGTGGGCTCAGGAACAATGCGCCACCTATGAG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCCCGATCTGGGTCTaGGCTTGGTCGAGATCCTCC +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAIPIWV*AWSRSS
Trigger: GGAGGATCTCGACCAAGCCAAGACCCAGATCGGGAT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGCTAAATGGAGTGTGTaGTCCCACTGGTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWAKWSV*SHWLLM
Trigger: CATCAGCAACCAGTGGGACAACACACTCCATTTAGC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGCTAAATGGAGTGTGTaGTCCCACTGGTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAAKWSV*SHWLLM
Trigger: CATCAGCAACCAGTGGGACAACACACTCCATTTAGC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGTGACCGTCCAAGTTTaGCACAGAATCCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAVTVQV*HRILQL
Trigger: CAACTGCAGGATTCTGTGCAAAACTTGGACGGTCAC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGATGTTGCTGCTGCTGTaGCAGAGAAATCTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGMLLLL*QRNLSV
Trigger: GACACTGAGATTTCTCTGCAACAGCAGCAGCAACAT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCTTAAAATTTGGGCATaGAGCCGTCTGCTTTCCGGA +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTLKIWA*SRLLSG
Trigger: TCCGGAAAGCAGACGGCTCAATGCCCAAATTTTAAG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTATCCATCCATTCTaGAGCCTGTCCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGVIHPF*SLSWVL
Trigger: CAGGACCCAGGACAGGCTCAAGAATGGATGGATAAC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCAACCTCAGTTCCACTaGGTAAGACACTATCTCAGC +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTQPQFH*VRHYLS
Trigger: GCTGAGATAGTGTCTTACCAAGTGGAACTGAGGTTG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCCCTCTTCTGTTTGGTaGGGCCTTAGGGAACATTCT +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAPSSVW*GLREHS
Trigger: AGAATGTTCCCTAAGGCCCAACCAAACAGAAGAGGG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGCGCAGGTCTTCAAGTaGGGTGGTATAGGTTTTCAG +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWAQVFK*GGIGFQ
Trigger: CTGAAAACCTATACCACCCAACTTGAAGACCTGCGC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAAGGTTACTTGCTTCTaGGCGCAGGTCTTCAAGTTG +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGKVTCF*AQVFKL
Trigger: CAACTTGAAGACCTGCGCCAAGAAGCAAGTAACCTT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGTGTCTGAAGGTTACTaGCTTCTTGGCGCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPVSEGY*LLGAGL
Trigger: AAGACCTGCGCCAAGAAGCAAGTAACCTTCAGACAC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCATTCAAGGAGCAAGTaGGTGTTCTCGCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPHSRSK*VFSPGQ
Trigger: TTGGCCTGGCGAGAACACCAACTTGCTCCTTGAATG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCCAGCTTTCAGGGACTaGCTTCTACAGACAGCTGCA +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPPAFRD*LLQTAA
Trigger: TGCAGCTGTCTGTAGAAGCAAGTCCCTGAAAGCTGG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGATAACACCACAGGCTaGCTGTGTTCCATGCAGTAC +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLADNTTG*LCSMQY
Trigger: GTACTGCATGGAACACAGCAAGCCTGTGGTGTTATC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGATCAGACTTCTGGTTaGGTAGAGGCTGAAGCGCTC +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCDQTSG*VEAEAL
Trigger: GAGCGCTTCAGCCTCTACCAAACCAGAAGTCTGATC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGATTTGTTGCTGGCCTaGATCAACTGGTCACCCATC +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLADLLLA*INWSPI
Trigger: GATGGGTGACCAGTTGATCAAGGCCAGCAACAAATC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGCTGCTCTTGATTTGTaGCTGGCCTTGATCAACTGG +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWAALDL*LALINW
Trigger: CCAGTTGATCAAGGCCAGCAACAAATCAAGAGCAGC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGCTTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTCTCTCTTCAGTTCCTCTTaGGCACTCGTGTACAACACC +
Preference number: 5 (lower is better)
Translates to: CFARGAGTDVAGGWSPESLFSSS*ALVYNT
Trigger: GGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGAG...AGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGAGAAGTGCTCCACGTaGGTCAGCTGCAGGTCCATC +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAEKCST*VSCRSI
Trigger: GATGGACCTGCAGCTGACCAACGTGGAGCACTTCTC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTTCAGTTGGCGCATCTaGTCATCGGCGTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCFSWRI*SSASLS
Trigger: AGAGAGTGACGCCGATGACAAGATGCGCCAACTGAA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTTCAGTTGGCGCATCTaGTCATCGGCGTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPFSWRI*SSASLS
Trigger: AGAGAGTGACGCCGATGACAAGATGCGCCAACTGAA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGCCTGGAGGCCTGTCACCTTCCATTaGCTTGTAGTGATGCTCGGG +
Preference number: 5 (lower is better)
Translates to: WVAIQDSRAFFATIRAWRPVTFH*LVVMLG
Trigger: CCCGAGCATCACTACAAGCAAATGGAAGGTGACAGG...CCTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTCCTTGCTGCTCACGTaGACAGAGACCACTAATGCC +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSSLLLT*TETTNA
Trigger: GGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGGA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTCCTTGCTGCTCACGTaGACAGAGACCACTAATGCC +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPSLLLT*TETTNA
Trigger: GGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGGA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGTTTGCAGAAATTCCTaGCTGCTCACGTTGACAGAG +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGVCRNS*LLTLTE
Trigger: CTCTGTCAACGTGAGCAGCAAGGAATTTCTGCAAAC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACTGGCGGAGTCTACTTaGGAGCTCTGTGGATTCGGG +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLALAEST*ELCGFG
Trigger: CCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCACAGCAGCAGATTTaGACTCAACTGGTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWPQQQI*TQLVEV
Trigger: GACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTGG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAACTAAGTCACTCAGATaGGTCTGGGGCCACGTGCTG +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGTKSLR*VWGHVL
Trigger: CAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGACAGGTCCCGGGACCTaGCCAACACTAAGTCACTCA +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWTGPGT*PTLSHS
Trigger: TGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTGGGTACTGAACAGAACATTTaGGTGTATAACCGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: EAGPPSLPRRSWAGVRLGTEQNI*VYNRQL
Trigger: GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGT...ACCCAGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCAGGGGTGAGGCTCTGGAGTCTTGTCCTTaGATGATGATAGTGATGCAG +
Preference number: 5 (lower is better)
Translates to: AGGWSPESTSSKLGRGEALESCP*MMIVMQ
Trigger: CTGCATCACTATCATCATCAAAGGACAAGACTCCAG...AGCCTCACCCCTGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS GCA 90 bp ATGTCTGCGTTTAATGTTTCCGGCTCAACTGCCACGTTGGCTTGTTaGAGCCACAGCTCCAGCTCGGCCACCTGGGTCTTGCAGGCATGC +
Preference number: 5 (lower is better)
Translates to: MSAFNVSGSTATLAC*SHSSSSATWVLQAC
Trigger: GCATGCCTGCAAGACCCAGGTGGCCGAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCAGTTGAGCCGGAAACATTAAACGCAGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553308.1
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
ENST00000673869.1
CDS GCA 90 bp CAGACTTGGAACGAGGTGATATCGAGTCCCCCTGATCCAGCTATTTaGTGCCTAGACGTCACCTCTGAGCCACCACCTGGTCCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: QTWNEVISSPPDPAI*CLDVTSEPPPGPPS
Trigger: GCTGGGAGGACCAGGTGGTGGCTCAGAGGTGACGTCTAGGCAGCAAATAGCTGGATCAGGGGGACTCGATATCACCTCGTTCCAAGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS GCA 90 bp CTTCTGGGAAATAAGAGGGACGCCACTTCTTGTCTGTGCTCCTCCTaGCTGGGAGCGCCAAGCAGCTCAGAGCTCCTGCTTCACAGAGGT +
Preference number: 5 (lower is better)
Translates to: LLGNKRDATSCLCSS*LGAPSSSELLLHRG
Trigger: ACCTCTGTGAAGCAGGAGCTCTGAGCTGCTTGGCGCTCCCAGGCAGGAGGAGCACAGACAAGAAGTGGCGTCCCTCTTATTTCCCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554805.6
CDS CCA 90 bp TCAGCAATGTCTTGCAAAGCTGTCTCAGCAGCTGGGGGCAGGCTGTaGTTTAGGCAGCCCTTGCCAGAGGTGAGGGGAAGCTGGCTACTT +
Preference number: 5 (lower is better)
Translates to: SAMSCKAVSAAGGRL*FRQPLPEVRGSWLL
Trigger: AAGTAGCCAGCTTCCCCTCACCTCTGGCAAGGGCTGCCTAAACCACAGCCTGCCCCCAGCTGCTGAGACAGCTTTGCAAGACATTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAAAGAAGGGCCTTTCTaGCAGACATTTGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTKEGPF*QTFAIL
Trigger: CAAGATGGCAAATGTCTGCAAGAAAGGCCCTTCTTT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTCTTTGATGAGACCCTaGGTCCTTCCTCTACGGATA +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASLMRP*VLPLRI
Trigger: TATCCGTAGAGGAAGGACCAAGGGTCTCATCAAAGA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCAGGCCTCATGTTCTTaGATGAGACCCTTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCQASCS*MRPLVL
Trigger: AAGGACCAAGGGTCTCATCAAAGAACATGAGGCCTG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCTGAGTGCATGGCAGTaGGATTCTCCTGTTAAGCAC +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSLSAWQ*DSPVKH
Trigger: GTGCTTAACAGGAGAATCCAACTGCCATGCACTCAG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCGCTAAATGGAGTGTGTaGTCCCACTGGTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPAKWSV*SHWLLM
Trigger: CATCAGCAACCAGTGGGACAACACACTCCATTTAGC...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTTCCTCAACCGCTATTaGATCCACAGGCTTATCAGA +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGFLNRY*IHRLIR
Trigger: TCTGATAAGCCTGTGGATCAAATAGCGGTTGAGGAA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTACAGAAAATCCATGCTaGGTAGCCTGGAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCTENPC*VAWRSV
Trigger: CACTGACCTCCAGGCTACCAAGCATGGATTTTCTGT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAGGTTTCATTCCTGTTaGGGGCAACCTCAGTTCCAC +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGRFHSC*GQPQFH
Trigger: GTGGAACTGAGGTTGCCCCAAACAGGAATGAAACCT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACCAGCTTTCAGGGACTaGCTTCTACAGACAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTPAFRD*LLQTAA
Trigger: TGCAGCTGTCTGTAGAAGCAAGTCCCTGAAAGCTGG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCCTTCGTTCAGAGTTaGGTAAAGCCGGGCGTGTTT +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWAFVQS*VKPGVF
Trigger: AAACACGCCCGGCTTTACCAAACTCTGAACGAAGGC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGACGCCACCAACTGTTaGCCTTCGTTCAGAGTTTGG +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTDATNC*PSFRVW
Trigger: CCAAACTCTGAACGAAGGCAAACAGTTGGTGGCGTC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAATGCTTGAGAAGAGCTaGCAGCCTGTGGAGCTCATG +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGMLEKS*QPVELM
Trigger: CATGAGCTCCACAGGCTGCAAGCTCTTCTCAAGCAT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCCGGACCACCCTTGAGAGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCAGTACCAGAATCGGATaGTCATCATATTCACTTCAT +
Preference number: 5 (lower is better)
Translates to: PGPPLRGRSAVAVCCRGPSTRIG*SSYSLH
Trigger: ATGAAGTGAATATGATGACAATCCGATTCTGGTACT...GGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGATAACACCACAGGCTaGCTGTGTTCCATGCAGTAC +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGDNTTG*LCSMQY
Trigger: GTACTGCATGGAACACAGCAAGCCTGTGGTGTTATC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCAGAGACCTTTGAGTTaGCCGATAACCTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGQRPLS*PITSWS
Trigger: ACTCCAGGAGGTTATCGGCAAACTCAAAGGTCTCTG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACCTGCTGCTTCAGCCTaGCGGCAGCTTCACCATGAG +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSPAASA*RQLHHE
Trigger: CTCATGGTGAAGCTGCCGCAAGGCTGAAGCAGCAGG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACGAGCTGTTGAAACTTaGCTTCCTGCTGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGRAVET*LPAASA
Trigger: GGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTCG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCGAGCTGTTGAAACTTaGCTTCCTGCTGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWRAVET*LPAASA
Trigger: GGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTCG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGCGGTGGAGTTCCTCCAGCTCATCCTCAATCAGCACAGCATCCAGGGGCTCGCCGAGCTGTTGAAACTTaGCTTCCTGCTGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: SGGVPPAHPQSAQHPGARRAVET*LPAASA
Trigger: GGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTCG...GCGAGCCCCTGGATGCTGTGCTGATTGAGGATGAGCTGGAGGAACTCCACCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCGGAGAAAGGCTTCTTTaGTTTTCTGCACATCATGCT +
Preference number: 5 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSGERLL*FSAHHA
Trigger: AGCATGATGTGCAGAAAACAAAAGAAGCCTTTCTCC...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp TCCTGCTGTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGGATCAGACTTCTGGTTaGGTAGAGGCTGAAGCGCTC +
Preference number: 5 (lower is better)
Translates to: SCCGLPFRTRGPSLPPSVDQTSG*VEAEAL
Trigger: GAGCGCTTCAGCCTCTACCAAACCAGAAGTCTGATC...CACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCACAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCAACCAGGTGCGAAGGTaGCTCATGTTTTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPNQVRR*LMFLSN
Trigger: GTTGGACAAAAACATGAGCAACCTTCGCACCTGGTT...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACCAGGTGCGAAGGTaGCTCATGTTTTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLANQVRR*LMFLSN
Trigger: GTTGGACAAAAACATGAGCAACCTTCGCACCTGGTT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCACACTCGGTCTCATTaGCACAGGCATCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHHTRSH*HRHRSR
Trigger: ACGACTCCGATGCCTGTGCAAATGAGACCGAGTGTG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACACACTCGGTCTCATTaGCACAGGCATCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAHTRSH*HRHRSR
Trigger: ACGACTCCGATGCCTGTGCAAATGAGACCGAGTGTG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATTCAGTTGGCGCATCTaGTCATCGGCGTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTFSWRI*SSASLS
Trigger: AGAGAGTGACGCCGATGACAAGATGCGCCAACTGAA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCATCCGAAATGTTCAGTTGGCGCATCTaGTCATCGGCGTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: CSGQEGLSGTCHEWPSEMFSWRI*SSASLS
Trigger: AGAGAGTGACGCCGATGACAAGATGCGCCAACTGAA...CATTTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp TCCTGCTGTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGTTGGAAGCCATTCAGTaGGCGCATCTTGTCATCGGC +
Preference number: 5 (lower is better)
Translates to: SCCGLPFRTRGPSLPPSVLEAIQ*AHLVIG
Trigger: GCCGATGACAAGATGCGCCAACTGAATGGCTTCCAA...CACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCACAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATCTTCCTGCTGTGGGTaGCCATTCAGGACTCGCGGG +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSSCCG*PFRTRG
Trigger: CCCGCGAGTCCTGAATGGCAACCCACAGCAGGAAGA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGGAAGGAGCGCTGTGGCCGTGTGCTGCCGGGGACCCTGCTCTCTGTCTCCTCCTATCAGAGGGAGGCTTaGCCATCTTTAACATTTCCA +
Preference number: 5 (lower is better)
Translates to: RKERCGRVLPGTLLSVSSYQREA*PSLTFP
Trigger: TGGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATA...GGAGGAGACAGAGAGCAGGGTCCCCGGCAGCACACGGCCACAGCGCTCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp TCCTGCTGTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGTCCTTGCTGCTCACGTaGACAGAGACCACTAATGCC +
Preference number: 5 (lower is better)
Translates to: SCCGLPFRTRGPSLPPSVSLLLT*TETTNA
Trigger: GGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGGA...CACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCACAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp GGGCCACTAGATGACACAGGGACTGAGGAGATGACGGTTCCTCGCTCTCTCCCCTTCGGGGCTCTCGGTTaGCAGAAATTCCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GPLDDTGTEEMTVPRSLPFGALG*QKFLAA
Trigger: AGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGAA...GGGGAGAGAGCGAGGAACCGTCATCTCCTCAGTCCCTGTGTCATCTAGTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAACCCAGCCGTATACATaGAACCAGCCCATGCGGGTA +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLATQPYT*NQPMRV
Trigger: TACCCGCATGGGCTGGTTCAATGTATACGGCTGGGT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS GCA 90 bp GGGGACCCTGCTCTCTGTCTCCTCCTCGCCTTCTGTAGTTCTCACTaGTCTGAACTGCTGGGTAAAGAAACTTTGCTCGGGGAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GDPALCLLLAFCSSH*SELLGKETLLGELA
Trigger: TGCCAGCTCCCCGAGCAAAGTTTCTTTACCCAGCAGTTCAGAGCAGTGAGAACTACAGAAGGCGAGGAGGAGACAGAGAGCAGGGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS GCA 90 bp ACTTGGAACGAGGTGATATCGAGTCCCCCTGATCCAGCTATTTGCTaGCTAGACGTCACCTCTGAGCCACCACCTGGTCCTCCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: TWNEVISSPPDPAIC*LDVTSEPPPGPPSL
Trigger: AAGGCTGGGAGGACCAGGTGGTGGCTCAGAGGTGACGTCTAGGCAGCAAATAGCTGGATCAGGGGGACTCGATATCACCTCGTTCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS GCA 90 bp CTTCTACATCCCAAGCGACCTGCTGCCAGGGGTTCATCCCCAAACTaGAATGGCAGCAGAGGGCCTAATTCACCAGTCCTGATGCCAGCT +
Preference number: 5 (lower is better)
Translates to: LLHPKRPAARGSSPN*NGSRGPNSPVLMPA
Trigger: AGCTGGCATCAGGACTGGTGAATTAGGCCCTCTGCTGCCATTGCAGTTTGGGGATGAACCCCTGGCAGCAGGTCGCTTGGGATGTAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS CCA 90 bp GGGTACACAACGGAGCACGACCAACATGATTTGCTGTGGGATGAGTaGCGTTTTGGAGCCAGGGTCTCGAGTGGTAGGGACACTGAGTGG +
Preference number: 5 (lower is better)
Translates to: GYTTEHDQHDLLWDE*RFGARVSSGRDTEW
Trigger: CCACTCAGTGTCCCTACCACTCGAGACCCTGGCTCCAAAACGCCACTCATCCCACAGCAAATCATGTTGGTCGTGCTCCGTTGTGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS CCA 90 bp TGTCCTGACTACTCTGTCCCTGTGGTCTGTCTGGTCCCCAGGTCATaGCTGTCCCTTACCCCATCTGTTGGGCTGACTTGGCCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: CPDYSVPVVCLVPRS*LSLTPSVGLTWPWF
Trigger: AAACCAAGGCCAAGTCAGCCCAACAGATGGGGTAAGGGACAGCCATGACCTGGGGACCAGACAGACCACAGGGACAGAGTAGTCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGTCCCAGGGGCATCTTaGGAATACTGCAGAAACTGT +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGVPGAS*EYCRNC
Trigger: ACAGTTTCTGCAGTATTCCAAAGATGCCCCTGGGAC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCTCCCAGATTTCCACTaGTCCAATGAGTTTTTCAAC +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGLPDFH*SNEFFN
Trigger: GTTGAAAAACTCATTGGACAAGTGGAAATCTGGGAG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCTCCCAGATTTCCACTaGTCCAATGAGTTTTTCAAC +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTLPDFH*SNEFFN
Trigger: GTTGAAAAACTCATTGGACAAGTGGAAATCTGGGAG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACAGGCCTCATGTTCTTaGATGAGACCCTTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTQASCS*MRPLVL
Trigger: AAGGACCAAGGGTCTCATCAAAGAACATGAGGCCTG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCAGGCCTCATGTTCTTaGATGAGACCCTTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWQASCS*MRPLVL
Trigger: AAGGACCAAGGGTCTCATCAAAGAACATGAGGCCTG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGCTGATTATCTGATTTaGCAAATGGTGCCTCACTGT +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGADYLI*QMVPHC
Trigger: ACAGTGAGGCACCATTTGCAAAATCAGATAATCAGC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCGGTGACCAAGGCTTaGGTATTCTCCCACAAGACT +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSVTKA*VFSHKT
Trigger: AGTCTTGTGGGAGAATACCAAAGCCTTGGTCACCGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAACAGAAAATCCATGCTaGGTAGCCTGGAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGTENPC*VAWRSV
Trigger: CACTGACCTCCAGGCTACCAAGCATGGATTTTCTGT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTCACCCAACAAATTCTaGGCCCATAAGATAGTCTCT +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGSPNKF*AHKIVS
Trigger: AGAGACTATCTTATGGGCCAAGAATTTGTTGGGTGA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGCTCCTCATAGATGTTaGTTAGCTCCTGAAGATGTG +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAAPHRC*LAPEDV
Trigger: CACATCTTCAGGAGCTAACAAACATCTATGAGGAGC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCATTTCTGCCCAAACTaGCTCCTGAAATGCTTCACA +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAHFCPN*LLKCFT
Trigger: TGTGAAGCATTTCAGGAGCAAGTTTGGGCAGAAATG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGATTCCAATTCCTCTaGTTTTCGAAGAGGCATCTC +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPGFQFL*FSKRHL
Trigger: GAGATGCCTCTTCGAAAACAAGAGGAATTGGAATCC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGCTGCCTCTTTTGTTTaGGAAATTTCAGGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTAASFV*EISGSS
Trigger: AGAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGAAGGAATGTCTTTCTaGGATTTCAGTCTGCACCAA +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGEGMSF*DFSLHQ
Trigger: TTGGTGCAGACTGAAATCCAAGAAAGACATTCCTTC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTTATCCATCCATTCTaGAGCCTGTCCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHVIHPF*SLSWVL
Trigger: CAGGACCCAGGACAGGCTCAAGAATGGATGGATAAC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGTTATCCATCCATTCTaGAGCCTGTCCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAVIHPF*SLSWVL
Trigger: CAGGACCCAGGACAGGCTCAAGAATGGATGGATAAC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATGTAGTTGTGGCAGCTaGTCAGCTTGGTCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLACSCGS*SAWSGD
Trigger: GTCACCAGACCAAGCTGACAAGCTGCCACAACTACA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACCCTCTTCTGTTTGGTaGGGCCTTAGGGAACATTCT +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTPSSVW*GLREHS
Trigger: AGAATGTTCCCTAAGGCCCAACCAAACAGAAGAGGG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCGCTTCAGCCTCATGTaGAGTGGCTCCATTATCTCC +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHRFSLM*SGSIIS
Trigger: GGAGATAATGGAGCCACTCAACATGAGGCTGAAGCG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCCAGATGATTCCTGAGTaGTATCGTTATCATGTTGGC +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTQMIPE*YRYHVG
Trigger: GCCAACATGATAACGATACAACTCAGGAATCATCTG...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTGGATGCCTGGTTGCTaGCAGATGATTCCTGAGTTG +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWWMPGC*QMIPEL
Trigger: CAACTCAGGAATCATCTGCAAGCAACCAGGCATCCA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGTAGAATACCCATATTaGTGGAAACCTGAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAVEYPY*WKPEAP
Trigger: TGGAGCCTCAGGTTTCCACAAATATGGGTATTCTAC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGCGCAGGTCTTCAAGTaGGGTGGTATAGGTTTTCAG +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGAQVFK*GGIGFQ
Trigger: CTGAAAACCTATACCACCCAACTTGAAGACCTGCGC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGTGCTCCAGGCAGACTaGAAGGTTGTCAAAACATTC +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSVLQAD*KVVKTF
Trigger: GAATGTTTTGACAACCTTCAAGTCTGCCTGGAGCAC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGCTCCAGGCAGACTaGAAGGTTGTCAAAACATTC +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGVLQAD*KVVKTF
Trigger: GAATGTTTTGACAACCTTCAAGTCTGCCTGGAGCAC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTTTGGCAGAGTATGCTaGGATCAACAACATGTCAGC +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWFGRVC*DQQHVS
Trigger: GCTGACATGTTGTTGATCCAAGCATACTCTGCCAAA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCATGGTCAATTTTCTaGTTCAGGGACAACCACTGC +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSWSIF*FRDNHC
Trigger: GCAGTGGTTGTCCCTGAACAAGAAAATTGACCATGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCTTGAGATGCAGAACTaGGTGAATGCACGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCLEMQN*VNARSL
Trigger: AAGACTCCGTGCATTCACCAAGTTCTGCATCTCAAG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACAGAGACCTTTGAGTTaGCCGATAACCTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGQRPLS*PITSWS
Trigger: ACTCCAGGAGGTTATCGGCAAACTCAAAGGTCTCTG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCAGAGACCTTTGAGTTaGCCGATAACCTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWQRPLS*PITSWS
Trigger: ACTCCAGGAGGTTATCGGCAAACTCAAAGGTCTCTG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCTGGTCTGCAATGGCTaGGTTCACCTGAGTCCACCT +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQLVCNG*VHLSPP
Trigger: AGGTGGACTCAGGTGAACCAAGCCATTGCAGACCAG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCACCTGCTGCTTCAGCCTaGCGGCAGCTTCACCATGAG +
Preference number: 5 (lower is better)
Translates to: RSLPVYAKNQSGFLWGLPPAASA*RQLHHE
Trigger: CTCATGGTGAAGCTGCCGCAAGGCTGAAGCAGCAGG...TGGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTCACTAAGTGGGAGCTaGAGGCTCACTTCATTCAAA +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASLSGS*RLTSFK
Trigger: TTTGAATGAAGTGAGCCTCAAGCTCCCACTTAGTGA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAAGAAGTAGTGAAATCTaGCCACTGCCTCACCAGCCC +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLARSSEI*PLPHQP
Trigger: GGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTCT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACCAGCTGTCCTGAAGTaGACTGATTCTCCTACCCAC +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAPAVLK*TDSPTH
Trigger: GTGGGTAGGAGAATCAGTCAACTTCAGGACAGCTGG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCCAGCTGTCCTGAAGTaGACTGATTCTCCTACCCAC +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHPAVLK*TDSPTH
Trigger: GTGGGTAGGAGAATCAGTCAACTTCAGGACAGCTGG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGTCCGCCTTCATAGTTaGAAGTTCTTTCAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTVRLHS*KFFQVL
Trigger: CAGAACTTGAAAGAACTTCAAACTATGAAGGCGGAC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCAGAGGTCCTCCCATaGTCTGTGCAAATGCTCTAT +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWAEVLP*SVQMLY
Trigger: ATAGAGCATTTGCACAGACAATGGGAGGACCTCTGC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCGCTGTCTGTAGAACTTaGTTTTCCATCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPAVCRT*FSICTS
Trigger: GCTGGTGCAGATGGAAAACAAAGTTCTACAGACAGC...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGATTTGTTGCTGGCCTaGATCAACTGGTCACCCATC +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTDLLLA*INWSPI
Trigger: GATGGGTGACCAGTTGATCAAGGCCAGCAACAAATC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTCAGCTGCTCTTGATTaGTTGCTGGCCTTGATCAAC +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSSAALD*LLALIN
Trigger: GTTGATCAAGGCCAGCAACAAATCAAGAGCAGCTGA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATTCAGTTGGCGCATCTaGTCATCGGCGTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAFSWRI*SSASLS
Trigger: AGAGAGTGACGCCGATGACAAGATGCGCCAACTGAA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACCTGTCACCTTCCATTaGCTTGTAGTGATGCTCGGG +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAPVTFH*LVVMLG
Trigger: CCCGAGCATCACTACAAGCAAATGGAAGGTGACAGG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTCCTTGCTGCTCACGTaGACAGAGACCACTAATGCC +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSLLLT*TETTNA
Trigger: GGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGGA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTTGCAGAAATTCCTaGCTGCTCACGTTGACAGAG +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGVCRNS*LLTLTE
Trigger: CTCTGTCAACGTGAGCAGCAAGGAATTTCTGCAAAC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGCTGGCGGAGTCTACTTTGGAGCTCTGTGGATTCGGGGCTCTCGGTTTGCAGAACTAAGTCACTCAGATaGGTCTGGGGCCACGTGCTG +
Preference number: 5 (lower is better)
Translates to: SWRSLLWSSVDSGLSVCRTKSLR*VWGHVL
Trigger: CAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT...TCTGCAAACCGAGAGCCCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACCGGCAGCTCAAAATaGCCAGCTGATTGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSTGSSK*PADWSK
Trigger: TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCTCTCGCTGTAGATCCTaGCCTCCCCAACTGATAAAG +
Preference number: 5 (lower is better)
Translates to: ACSDARDRKGCREHATSGSRCRS*PPQLIK
Trigger: CTTTATCAGTTGGGGAGGCAAGGATCTACAGCGAGA...GCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS GCA 90 bp GTTAGCATAGCCTGGCACCCTACCAGCTGCTGTTCCAGCACCTGCTaGATGTCTGCGTTTAATGTTTCCGGCTCAACTGCCACGTTGGCT +
Preference number: 5 (lower is better)
Translates to: VSIAWHPTSCCSSTC*MSAFNVSGSTATLA
Trigger: AGCCAACGTGGCAGTTGAGCCGGAAACATTAAACGCAGACATGCAGCAGGTGCTGGAACAGCAGCTGGTAGGGTGCCAGGCTATGCTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
ENST00000673869.1
CDS GCA 90 bp AGGTGTGGTGCCCTCCACACTCATAGCAACAATCACGTGACCTGGTaGCACAGGTTTCCAAGCAGCCGATCTGCGAGTAAGCAGGTACAG +
Preference number: 5 (lower is better)
Translates to: RCGALHTHSNNHVTW*HRFPSSRSASKQVQ
Trigger: CTGTACCTGCTTACTCGCAGATCGGCTGCTTGGAAACCTGTGGCACCAGGTCACGTGATTGTTGCTATGAGTGTGGAGGGCACCACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673797.1
ENST00000673869.1
CDS CCA 90 bp TGCCTCACCAGCCCATCAACGTCACCCTTCCTCTGCCGAACACCCTaGACAGCATTCTGCCACCGATCCGTCAGCTTTGAGAATTCTGTA +
Preference number: 5 (lower is better)
Translates to: CLTSPSTSPFLCRTP*TAFCHRSVSFENSV
Trigger: TACAGAATTCTCAAAGCTGACGGATCGGTGGCAGAATGCTGTCCAGGGTGTTCGGCAGAGGAAGGGTGACGTTGATGGGCTGGTGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS CCA 90 bp TGGGCGTTCAGCCCATCAACGTCACCCTTCCTCTGCCGAACACCCTaGACAGCATTCTGCCACCGATCCGTCAGCTTTGAGAATTCTGTA +
Preference number: 5 (lower is better)
Translates to: WAFSPSTSPFLCRTP*TAFCHRSVSFENSV
Trigger: TACAGAATTCTCAAAGCTGACGGATCGGTGGCAGAATGCTGTCCAGGGTGTTCGGCAGAGGAAGGGTGACGTTGATGGGCTGAACGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS CCA 90 bp TGGGAAATAAGAGGGACGCCACTTCTTGTCTGTGCTCCTCCTGCCTaGGAGCGCCAAGCAGCTCAGAGCTCCTGCTTCACAGAGGTTAAA +
Preference number: 5 (lower is better)
Translates to: WEIRGTPLLVCAPPA*ERQAAQSSCFTEVK
Trigger: TTTAACCTCTGTGAAGCAGGAGCTCTGAGCTGCTTGGCGCTCCCAGGCAGGAGGAGCACAGACAAGAAGTGGCGTCCCTCTTATTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554805.6
CDS CCA 90 bp AGGAGGTGTGGTGCCCTCCACACTCATAGCAACAATCACGTGACCTaGTGCCACAGGTTTCCAAGCAGCCGATCTGCGAGTAAGCAGGTA +
Preference number: 5 (lower is better)
Translates to: RRCGALHTHSNNHVT*CHRFPSSRSASKQV
Trigger: TACCTGCTTACTCGCAGATCGGCTGCTTGGAAACCTGTGGCACCAGGTCACGTGATTGTTGCTATGAGTGTGGAGGGCACCACACCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673797.1
ENST00000673869.1
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAAAGAAGGGCCTTTCTaGCAGACATTTGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGKEGPF*QTFAIL
Trigger: CAAGATGGCAAATGTCTGCAAGAAAGGCCCTTCTTT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCTCAGATTGTCTTTGTaGGATCTATGCTTCACACTC +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLALRLSL*DLCFTL
Trigger: GAGTGTGAAGCATAGATCCAACAAAGACAATCTGAG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGTCCCAGGGGCATCTTaGGAATACTGCAGAAACTGT +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAVPGAS*EYCRNC
Trigger: ACAGTTTCTGCAGTATTCCAAAGATGCCCCTGGGAC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTCCCAGGGGCATCTTaGGAATACTGCAGAAACTGT +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHVPGAS*EYCRNC
Trigger: ACAGTTTCTGCAGTATTCCAAAGATGCCCCTGGGAC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACAGGCCTCATGTTCTTaGATGAGACCCTTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAQASCS*MRPLVL
Trigger: AAGGACCAAGGGTCTCATCAAAGAACATGAGGCCTG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGCTGATTATCTGATTTaGCAAATGGTGCCTCACTGT +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAADYLI*QMVPHC
Trigger: ACAGTGAGGCACCATTTGCAAAATCAGATAATCAGC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCCTGAATTTGTTGTTTaGCAGGTGGTGTTCAAGAAT +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGPEFVV*QVVFKN
Trigger: ATTCTTGAACACCACCTGCAAAACAACAAATTCAGG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGGTAATCCTGAATTTGTaGTTTTGCAGGTGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGVILNL*FCRWCS
Trigger: TGAACACCACCTGCAAAACAACAAATTCAGGATTAC...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCGAAGTAATCCTGAATTaGTTGTTTTGCAGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTEVILN*LFCRWC
Trigger: ACACCACCTGCAAAACAACAAATTCAGGATTACTTC...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTCCTTTAATACAAAGTaGCCTGGCTCTTCTAAGCGG +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSSFNTK*PGSSKR
Trigger: CCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGGA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTCGGTGACCAAGGCTTaGGTATTCTCCCACAAGACT +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSVTKA*VFSHKT
Trigger: AGTCTTGTGGGAGAATACCAAAGCCTTGGTCACCGA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCAAAACTCTCCCACATaGTTCAAGACATTCGGTGAC +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPQNSPT*FKTFGD
Trigger: GTCACCGAATGTCTTGAACAATGTGGGAGAGTTTTG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCAAAGAGTTGTTCAATaGGGCCACAGATTCAAACTG +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPQRVVQ*GHRFKL
Trigger: CAGTTTGAATCTGTGGCCCAATTGAACAACTCTTTG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTCCTCAAGTGGCATTTaGCCTTCGGATGAATTCAAA +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASSSGI*PSDEFK
Trigger: TTTGAATTCATCCGAAGGCAAAATGCCACTTGAGGA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGATTTGAGAATGCTGTaGAGACAACATTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPDLRML*RQHSIS
Trigger: GGAGATGGAATGTTGTCTCAACAGCATTCTCAAATC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTCCACAGCTGAATCCTaGTTTATTTCCCAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSSTAES*FISQSS
Trigger: GGAAGACTGGGAAATAAACAAGGATTCAGCTGTGGA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTCAACAAGGCTTTCATaGAAGATTCAACTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSTRLS*KIQLQQ
Trigger: TTGCTGCAGTTGAATCTTCAATGAAAGCCTTGTTGA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCCAACCATGTTCAAGTaGCTTAATCTGGCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAPTMFK*LNLAFQ
Trigger: TTGGAAAGCCAGATTAAGCAACTTGAACATGGTTGG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCTAGGAACCTTATCTTaGACCTCTTCAGCCAACGAT +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSLGTLS*TSSAND
Trigger: ATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGCTCCTGAAGATGTGTaGAGATTCCACTGTCAATTT +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAAPEDV*RFHCQF
Trigger: AAATTGACAGTGGAATCTCAACACATCTTCAGGAGC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGCTCCTCATAGATGTTaGTTAGCTCCTGAAGATGTG +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSAPHRC*LAPEDV
Trigger: CACATCTTCAGGAGCTAACAAACATCTATGAGGAGC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACTTAAAATTTGGGCATaGAGCCGTCTGCTTTCCGGA +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGLKIWA*SRLLSG
Trigger: TCCGGAAAGCAGACGGCTCAATGCCCAAATTTTAAG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCTTAAAATTTGGGCATaGAGCCGTCTGCTTTCCGGA +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWLKIWA*SRLLSG
Trigger: TCCGGAAAGCAGACGGCTCAATGCCCAAATTTTAAG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCAAACTCACGTAGTTTaGTCTCCACATCACTCGCTT +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSQTHVV*SPHHSL
Trigger: AAGCGAGTGATGTGGAGACAAAACTACGTGAGTTTG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTCAGTTTCCTGTGCTTaGAAAGCTTCCTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWSVSCA*KASFIA
Trigger: AGCAATGAAGGAAGCTTTCAAAGCACAGGAAACTGA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGGCTGCCTCTTTTGTTTaGGAAATTTCAGGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWAASFV*EISGSS
Trigger: AGAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGC...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCTTGTAAAAGCTGATTaGTCCGCTGAAACACAGGCA +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCLVKAD*SAETQA
Trigger: TGCCTGTGTTTCAGCGGACAAATCAGCTTTTACAAG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCTCTTCTTCCATGTCCTaGTCATGCTTCCAAAGTGAA +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPSSSMS*SCFQSE
Trigger: TTCACTTTGGAAGCATGACAAGGACATGGAAGAAGA...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAACAGAAAGGCAACCTaGTGCTCAATCTCTGTTAGC +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGNRKAT*CSISVS
Trigger: GCTAACAGAGATTGAGCACAAGGTTGCCTTTCTGTT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTGTATCGTTATCATGTaGGCAATACTGGGGCCACAT +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPCIVIM*AILGPH
Trigger: ATGTGGCCCCAGTATTGCCAACATGATAACGATACA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAAGGTTACTTGCTTCTaGGCGCAGGTCTTCAAGTTG +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGKVTCF*AQVFKL
Trigger: CAACTTGAAGACCTGCGCCAAGAAGCAAGTAACCTT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGTGCTCCAGGCAGACTaGAAGGTTGTCAAAACATTC +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWVLQAD*KVVKTF
Trigger: GAATGTTTTGACAACCTTCAAGTCTGCCTGGAGCAC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATTGCAACAAAGCATCTaGCTGGCTCTCAGTGACGAA +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGLQQSI*LALSDE
Trigger: TTCGTCACTGAGAGCCAGCAAGATGCTTTGTTGCAA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCGGCAATTTCTCCATTaGAAGCTGGTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLARQFLH*KLVKFF
Trigger: GAAAAACTTCACCAGCTTCAAATGGAGAAATTGCCG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTGTGCTTCCAGCCAGTaGTTCAAGATCTGTATTTTA +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTCASSQ*FKICIL
Trigger: TAAAATACAGATCTTGAACAACTGGCTGGAAGCACA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGATAACACCACAGGCTaGCTGTGTTCCATGCAGTAC +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHDNTTG*LCSMQY
Trigger: GTACTGCATGGAACACAGCAAGCCTGTGGTGTTATC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTGGTCTGCAATGGCTaGGTTCACCTGAGTCCACCT +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSLVCNG*VHLSPP
Trigger: AGGTGGACTCAGGTGAACCAAGCCATTGCAGACCAG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGATGTTTGCGAGCTGTaGAAACTTTGCTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWDVCEL*KLCFLL
Trigger: CAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACATC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGTGCAAATGCTCTATTaGCTCCTTCAAAACCATCAC +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAVQMLY*LLQNHH
Trigger: GTGATGGTTTTGAAGGAGCAAATAGAGCATTTGCAC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAATACAACCCATGTATaGAGTCTGTCTTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTNTTHV*SLSSIS
Trigger: GGAGATTGAAGACAGACTCAATACATGGGTTGTATT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTTAATTTTGTTGAGCTaGTCATCGATCTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGLILLS*SSISAA
Trigger: AGCAGCTGAGATCGATGACAAGCTCAACAAAATTAA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAACCAGGTGCGAAGGTaGCTCATGTTTTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGNQVRR*LMFLSN
Trigger: GTTGGACAAAAACATGAGCAACCTTCGCACCTGGTT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATACACCTCTGAGGAATTaGGGCAGGCTGCCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDTPLRN*GRLPSS
Trigger: AGAGGACGGCAGCCTGCCCAAATTCCTCAGAGGTGT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTATCAGAGGGAGGCTTaGCCATCTTTAACATTTCCA +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWYQREA*PSLTFP
Trigger: TGGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGTTTGCAGAAATTCCTaGCTGCTCACGTTGACAGAG +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTVCRNS*LLTLTE
Trigger: CTCTGTCAACGTGAGCAGCAAGGAATTTCTGCAAAC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAACAGGTCCCGGGACCTaGCCAACACTAAGTCACTCA +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSTGPGT*PTLSHS
Trigger: TGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAACCGGCAGCTCAAAATaGCCAGCTGATTGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGTGSSK*PADWSK
Trigger: TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TCCTGCTGTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGACCGGCAGCTCAAAATaGCCAGCTGATTGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: SCCGLPFRTRGPSLPPSVTGSSK*PADWSK
Trigger: TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGT...CACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCACAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS TCA 90 bp TCAATAGGAGGTGTGGTGCCCTCCACACTCATAGCAACAATCACGTaGCCTGGTGCCACAGGTTTCCAAGCAGCCGATCTGCGAGTAAGC +
Preference number: 5 (lower is better)
Translates to: SIGGVVPSTLIATIT*PGATGFQAADLRVS
Trigger: GCTTACTCGCAGATCGGCTGCTTGGAAACCTGTGGCACCAGGTCACGTGATTGTTGCTATGAGTGTGGAGGGCACCACACCTCCTATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673797.1
ENST00000673869.1
CDS GCA 90 bp TCTGTTAGCATAGCCTGGCACCCTACCAGCTGCTGTTCCAGCACCTaGTGCATGTCTGCGTTTAATGTTTCCGGCTCAACTGCCACGTTG +
Preference number: 5 (lower is better)
Translates to: SVSIAWHPTSCCSST*CMSAFNVSGSTATL
Trigger: CAACGTGGCAGTTGAGCCGGAAACATTAAACGCAGACATGCAGCAGGTGCTGGAACAGCAGCTGGTAGGGTGCCAGGCTATGCTAACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
ENST00000673869.1
CDS CCA 90 bp ATCCAATTCCCTGAAGCTCACTGCAGCGCTCCAGTGCCGTGGCCGTaGCCCGAATCCATTGCCGGTTCATATTTTGTAACGTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: IQFPEAHCSAPVPWP*PESIAGSYFVTSSQ
Trigger: CTGTGAAGACGTTACAAAATATGAACCGGCAATGGATTCGGGCCACGGCCACGGCACTGGAGCGCTGCAGTGAGCTTCAGGGAATTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000556342.1
CDS CCA 90 bp TCACTAGATGGGTACACAACGGAGCACGACCAACATGATTTGCTGTaGGATGAGTGGCGTTTTGGAGCCAGGGTCTCGAGTGGTAGGGAC +
Preference number: 5 (lower is better)
Translates to: SLDGYTTEHDQHDLL*DEWRFGARVSSGRD
Trigger: GTCCCTACCACTCGAGACCCTGGCTCCAAAACGCCACTCATCCCACAGCAAATCATGTTGGTCGTGCTCCGTTGTGTACCCATCTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTCTCTCAGATTGTCTTaGTTGGATCTATGCTTCACA +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASLRLS*LDLCFT
Trigger: TGTGAAGCATAGATCCAACAAAGACAATCTGAGAGA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCCTTTAATACAAAGTaGCCTGGCTCTTCTAAGCGG +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSFNTK*PGSSKR
Trigger: CCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACAAAACTCTCCCACATaGTTCAAGACATTCGGTGAC +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGQNSPT*FKTFGD
Trigger: GTCACCGAATGTCTTGAACAATGTGGGAGAGTTTTG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAGGTTCACTTTAATGTaGCTGAACCAGTCATTAAAG +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTRFTLM*LNQSLK
Trigger: CTTTAATGACTGGTTCAGCAACATTAAAGTGAACCT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCAGTCTTCAAGCTCCTTaGCTCGAGCCTGGCATATGG +
Preference number: 5 (lower is better)
Translates to: SCCKESSSSFARAWHMDSSLQAP*LEPGIW
Trigger: CCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACT...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTATTCCTTCAAAGAGTaGTTCAATTGGGCCACAGAT +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWYSFKE*FNWATD
Trigger: ATCTGTGGCCCAATTGAACAACTCTTTGAAGGAATA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGTGTTGTCCCACTGGTaGCTGATGTCAGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDVLSHW*LMSVRV
Trigger: GACCCTCACTGACATCAGCAACCAGTGGGACAACAC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGCACAGAATCCTGCAGTaGTTGAAGAAGACTTTCGTG +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWHRILQ*LKKTFV
Trigger: CACGAAAGTCTTCTTCAACAACTGCAGGATTCTGTG...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGATTTGAGAATGCTGTaGAGACAACATTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSDLRML*RQHSIS
Trigger: GGAGATGGAATGTTGTCTCAACAGCATTCTCAAATC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGTTGAGCGTTTTGATTaGAGAATGCTGTTGAGACAA +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPVERFD*RMLLRQ
Trigger: TTGTCTCAACAGCATTCTCAAATCAAAACGCTCAAC...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTAAGACATTCTGTTaGTTCCAGTGGCTTAATGGC +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGVKTFC*FQWLNG
Trigger: GCCATTAAGCCACTGGAACAAACAGAATGTCTTAAC...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCGCCCCAGTTTCTGTTTaGTTAAGACATTCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAAPVSV*LRHSVC
Trigger: ACAAACAGAATGTCTTAACAAAACAGAAACTGGGGC...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCCGAATATCCTATATaGTGGAGAACCAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQAEYPI*WRTKAP
Trigger: TGGGGCCTTGGTTCTCCACAATATAGGATATTCGGC...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAGGAACCTTATCTTaGACCTCTTCAGCCAACGAT +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTLGTLS*TSSAND
Trigger: ATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGCTCCTGAAGATGTGTaGAGATTCCACTGTCAATTT +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSAPEDV*RFHCQF
Trigger: AAATTGACAGTGGAATCTCAACACATCTTCAGGAGC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGCTCCTCATAGATGTTaGTTAGCTCCTGAAGATGTG +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTAPHRC*LAPEDV
Trigger: CACATCTTCAGGAGCTAACAAACATCTATGAGGAGC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTTAAGTAATAGTTCATaGCGCTGTATACTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLALSNSS*RCILSA
Trigger: GGCTGACAGTATACAGCGCAATGAACTATTACTTAA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCAGTATTTCTTTCTCCTaGAATGAGTCATCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTSISFS*NESSKV
Trigger: GACCTTTGATGACTCATTCAAGGAGAAAGAAATACT...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACATTTCTGCCCAAACTaGCTCCTGAAATGCTTCACA +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGHFCPN*LLKCFT
Trigger: TGTGAAGCATTTCAGGAGCAAGTTTGGGCAGAAATG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCCATCATTCAAGACATTaGTGCGCAAATCAATGCTTG +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLAHHSRH*CANQCL
Trigger: CAAGCATTGATTTGCGCACAAATGTCTTGAATGATG...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGGATTCCAATTCCTCTaGTTTTCGAAGAGGCATCTC +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWGFQFL*FSKRHL
Trigger: GAGATGCCTCTTCGAAAACAAGAGGAATTGGAATCC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTTCTTAAGGATGCTTaGAAGCTCCTCAAATTGTTC +
Preference number: 5 (lower is better)
Translates to: PGSPCWVSPEEVCTGPGTFLKDA*KLLKLF
Trigger: GAACAATTTGAGGAGCTTCAAAGCATCCTTAAGAAA...GGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGTTTCTTAAGGATGCTTaGAAGCTCCTCAAATTGTTC +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGFLKDA*KLLKLF
Trigger: GAACAATTTGAGGAGCTTCAAAGCATCCTTAAGAAA...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACAACCTCAGTTCCACTaGGTAAGACACTATCTCAGC +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAQPQFH*VRHYLS
Trigger: GCTGAGATAGTGTCTTACCAAGTGGAACTGAGGTTG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTTGTAAAAGCTGATTaGTCCGCTGAAACACAGGCA +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTLVKAD*SAETQA
Trigger: TGCCTGTGTTTCAGCGGACAAATCAGCTTTTACAAG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATGTAGTTGTGGCAGCTaGTCAGCTTGGTCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSCSCGS*SAWSGD
Trigger: GTCACCAGACCAAGCTGACAAGCTGCCACAACTACA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAATGCTTCCTGAACAATaGTTCCAGAGGATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGMLPEQ*FQRMRK
Trigger: CTTCCTCATCCTCTGGAACAATTGTTCAGGAAGCAT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGTCTGGTGTGAGGATTaGTGCCATGGAATTATCAGA +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGVWCED*CHGIIR
Trigger: TCTGATAATTCCATGGCACAAATCCTCACACCAGAC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGAATCTTTCTGTTCCATaGGTTTTAACTCCAGAACCT +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGNLSVP*VLTPEP
Trigger: AGGTTCTGGAGTTAAAACCAATGGAACAGAAAGATT...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATGTATCGTTATCATGTaGGCAATACTGGGGCCACAT +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTCIVIM*AILGPH
Trigger: ATGTGGCCCCAGTATTGCCAACATGATAACGATACA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCAGATGATTCCTGAGTaGTATCGTTATCATGTTGGC +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPQMIPE*YRYHVG
Trigger: GCCAACATGATAACGATACAACTCAGGAATCATCTG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAGTAGAATACCCATATTaGTGGAAACCTGAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGVEYPY*WKPEAP
Trigger: TGGAGCCTCAGGTTTCCACAAATATGGGTATTCTAC...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACCAGCTTTCAGGGACTaGCTTCTACAGACAGCTGCA +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSPAFRD*LLQTAA
Trigger: TGCAGCTGTCTGTAGAAGCAAGTCCCTGAAAGCTGG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATTTGGCAGAGTATGCTaGGATCAACAACATGTCAGC +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGFGRVC*DQQHVS
Trigger: GCTGACATGTTGTTGATCCAAGCATACTCTGCCAAA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCATGGTCAATTTTCTaGTTCAGGGACAACCACTGC +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSWSIF*FRDNHC
Trigger: GCAGTGGTTGTCCCTGAACAAGAAAATTGACCATGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCGGCAATTTCTCCATTaGAAGCTGGTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCRQFLH*KLVKFF
Trigger: GAAAAACTTCACCAGCTTCAAATGGAGAAATTGCCG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTTTCAGTCTCTCTTCTaGTGCTTCCAGCCAGTTGTT +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWFQSLF*CFQPVV
Trigger: AACAACTGGCTGGAAGCACAAGAAGAGAGACTGAAA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGCACTTCATCATAGAGTaGATCATAAATCTTCCACTC +
Preference number: 5 (lower is better)
Translates to: APGSPCWVSPEEVCTGPGHFIIE*IINLPL
Trigger: GAGTGGAAGATTTATGATCAACTCTATGATGAAGTG...CCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCTTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGGATAACACCACAGGCTaGCTGTGTTCCATGCAGTAC +
Preference number: 5 (lower is better)
Translates to: PFPVALVPSDTLGEPGGLDNTTG*LCSMQY
Trigger: GTACTGCATGGAACACAGCAAGCCTGTGGTGTTATC...CAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CAA 90 bp CGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCACTGGTCTGCAATGGCTaGGTTCACCTGAGTCCACCT +
Preference number: 5 (lower is better)
Translates to: RSLPVYAKNQSGFLWGLPLVCNG*VHLSPP
Trigger: AGGTGGACTCAGGTGAACCAAGCCATTGCAGACCAG...TGGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATCACTAAGTGGGAGCTaGAGGCTCACTTCATTCAAA +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTSLSGS*RLTSFK
Trigger: TTTGAATGAAGTGAGCCTCAAGCTCCCACTTAGTGA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TCCTGCTGTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTGTCACTAAGTGGGAGCTaGAGGCTCACTTCATTCAAA +
Preference number: 5 (lower is better)
Translates to: SCCGLPFRTRGPSLPPSVSLSGS*RLTSFK
Trigger: TTTGAATGAAGTGAGCCTCAAGCTCCCACTTAGTGA...CACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCACAGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGTCCGCCTTCATAGTTaGAAGTTCTTTCAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSVRLHS*KFFQVL
Trigger: CAGAACTTGAAAGAACTTCAAACTATGAAGGCGGAC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTGTGCAAATGCTCTATTaGCTCCTTCAAAACCATCAC +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCVQMLY*LLQNHH
Trigger: GTGATGGTTTTGAAGGAGCAAATAGAGCATTTGCAC...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAATACAACCCATGTATaGAGTCTGTCTTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLANTTHV*SLSSIS
Trigger: GGAGATTGAAGACAGACTCAATACATGGGTTGTATT...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGCTTTGCTCGGGGAGCTGGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTCTAATACAACCCATGTATaGAGTCTGTCTTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: CFARGAGTDVAGGWSPESNTTHV*SLSSIS
Trigger: GGAGATTGAAGACAGACTCAATACATGGGTTGTATT...AGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGCTGTCTGTAGAACTTaGTTTTCCATCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHAVCRT*FSICTS
Trigger: GCTGGTGCAGATGGAAAACAAAGTTCTACAGACAGC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATCAGCTGCTCTTGATTaGTTGCTGGCCTTGATCAAC +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASAALD*LLALIN
Trigger: GTTGATCAAGGCCAGCAACAAATCAAGAGCAGCTGA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCACACTCGGTCTCATTaGCACAGGCATCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDHTRSH*HRHRSR
Trigger: ACGACTCCGATGCCTGTGCAAATGAGACCGAGTGTG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTATCAGAGGGAGGCTTaGCCATCTTTAACATTTCCA +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPYQREA*PSLTFP
Trigger: TGGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGCCCATGTCCACTTGAGGTaGACGTTCTACCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: FSSCISSLRHSRRARGSAHVHLR*TFYQLL
Trigger: AAGGAGCTGGTAGAACGTCAACCTCAAGTGGACATG...GGCAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp GCTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCGAATTCACAAAGTGCTaGGCTCTTCAGGAAACTGAC +
Preference number: 5 (lower is better)
Translates to: ACSDARDRKGCREHATSGEFTKC*ALQETD
Trigger: GTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTC...GCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAACCGGCAGCTCAAAATaGCCAGCTGATTGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLATGSSK*PADWSK
Trigger: TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGT...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAACTGAACAGAACATTTaGGTGTATAACCGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTTEQNI*VYNRQL
Trigger: GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGT...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACAGTTGTTGGGTATCTaGCAGATGATTCCTGAGTTG +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTQLLGI*QMIPEL
Trigger: CAACTCAGGAATCATCTGCAAGATACCCAACAACTG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS GCA 90 bp CATTCTGGTAACTGCGGTTGTAATCGAGGCCAGCTTTCAGGGACTTaGTTCTACAGACAGCTGCAGCCTGAGTGTGCTCCAGGCAGACTT +
Preference number: 5 (lower is better)
Translates to: HSGNCGCNRGQLSGT*FYRQLQPECAPGRL
Trigger: AAGTCTGCCTGGAGCACACTCAGGCTGCAGCTGTCTGTAGAAGCAAGTCCCTGAAAGCTGGCCTCGATTACAACCGCAGTTACCAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000555002.6
ENST00000673797.1
CDS GCA 90 bp TCCATGTACACGGTGCCACTGGCGGTTCATCTCCCCCAGGTGCTCTaGAAACTCCGTTCTTTCATAGCGCTTGCTTTCTACATCACAGGT +
Preference number: 5 (lower is better)
Translates to: SMYTVPLAVHLPQVL*KLRSFIALAFYITG
Trigger: ACCTGTGATGTAGAAAGCAAGCGCTATGAAAGAACGGAGTTTGCAGAGCACCTGGGGGAGATGAACCGCCAGTGGCACCGTGTACATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 90 bp AGGAAGCGAAACAAGTTCTCCACAGAAGTAGTGAAATCTTGCCACTaGCTCACCAGCCCATCAACGTCACCCTTCCTCTGCCGAACACCC +
Preference number: 5 (lower is better)
Translates to: RKRNKFSTEVVKSCH*LTSPSTSPFLCRTP
Trigger: GGGTGTTCGGCAGAGGAAGGGTGACGTTGATGGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTCTGTGGAGAACTTGTTTCGCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 90 bp CTTTCTGGTAACTGCGGTTGTAATCGAGGCCAGCTTTCAGGGACTTaGTTCTACAGACAGCTGCAGCCTGAGTGTGCTCCAGGCAGACTT +
Preference number: 5 (lower is better)
Translates to: LSGNCGCNRGQLSGT*FYRQLQPECAPGRL
Trigger: AAGTCTGCCTGGAGCACACTCAGGCTGCAGCTGTCTGTAGAAGCAAGTCCCTGAAAGCTGGCCTCGATTACAACCGCAGTTACCAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS GCA 90 bp TTGGCCTTGGTTTTCCAAATGGGCTTTGTACCCACCTTTATGTCCTaGAGGGCTGGGGGCAGGATCTCTGCCAGGTTGTTTCCAGACATG +
Preference number: 5 (lower is better)
Translates to: LALVFQMGFVPTFMS*RAGGRISARLFPDM
Trigger: CATGTCTGGAAACAACCTGGCAGAGATCCTGCCCCCAGCCCTGCAGGACATAAAGGTGGGTACAAAGCCCATTTGGAAAACCAAGGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS CCA 90 bp AGGTCATGGCTGTCCCTTACCCCATCTGTTGGGCTGACTTGGCCTTaGTTTTCCAAATGGGCTTTGTACCCACCTTTATGTCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: RSWLSLTPSVGLTWP*FSKWALYPPLCPAG
Trigger: CCCTGCAGGACATAAAGGTGGGTACAAAGCCCATTTGGAAAACCAAGGCCAAGTCAGCCCAACAGATGGGGTAAGGGACAGCCATGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS CCA 90 bp GTTCAATTTATCCAAGATGCCCACCCCCACAAGAAGCCTGTCTCCTaGTCCGTTCAGCTCCTCCAGCCAGATATCCGGAGTCAGTCAAAC +
Preference number: 5 (lower is better)
Translates to: VQFIQDAHPHKKPVS*SVQLLQPDIRSQSN
Trigger: GTTTGACTGACTCCGGATATCTGGCTGGAGGAGCTGAACGGACCAGGAGACAGGCTTCTTGTGGGGGTGGGCATCTTGGATAAATTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555323.1
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACAAAGAAGGGCCTTTCTaGCAGACATTTGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHKEGPF*QTFAIL
Trigger: CAAGATGGCAAATGTCTGCAAGAAAGGCCCTTCTTT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACAAGGCCTCTCTCAGATaGTCTTTGTTGGATCTATGC +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHKASLR*SLLDLC
Trigger: GCATAGATCCAACAAAGACAATCTGAGAGAGGCCTT...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGCTCCAGGGAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCCTATCCATCAGGCTCTaGAATAAAGTCATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: WAPGSPCWVSPEEVCTGPLSIRL*NKVIFS
Trigger: AGAGAAAATGACTTTATTCAAGAGCCTGATGGATAG...GGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTCCCTGGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTCAAACATAGAGCCTTaGGCAATAAGATGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLASNIEP*AIRCFK
Trigger: TTTGAAGCATCTTATTGCCAAAGGCTCTATGTTTGA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTCAAACATAGAGCCTTaGGCAATAAGATGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWSNIEP*AIRCFK
Trigger: TTTGAAGCATCTTATTGCCAAAGGCTCTATGTTTGA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCCCATTGCCTTTTCAGTaGATGGCTGATTATCTGATT +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPPLPFQ*MADYLI
Trigger: AATCAGATAATCAGCCATCAACTGAAAAGGCAATGG...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCCATTGCCTTTTCAGTaGATGGCTGATTATCTGATT +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCPLPFQ*MADYLI
Trigger: AATCAGATAATCAGCCATCAACTGAAAAGGCAATGG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCAAGCCTCTAGTAATTaGTTTTCCTCAGTGAATTCC +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGQASSN*FSSVNS
Trigger: GGAATTCACTGAGGAAAACAAATTACTAGAGGCTTG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCAAAACTCTCCCACATaGTTCAAGACATTCGGTGAC +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHQNSPT*FKTFGD
Trigger: GTCACCGAATGTCTTGAACAATGTGGGAGAGTTTTG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGAGGTATTTCACTGCTTaGGAGCAAAAACTGTATTTC +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWRYFTA*EQKLYF
Trigger: GAAATACAGTTTTTGCTCCAAAGCAGTGAAATACCT...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTGTACATGTTCCATCTaGTTCAAAATAGAGGACTCC +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSCTCSI*FKIEDS
Trigger: GGAGTCCTCTATTTTGAACAAGATGGAACATGTACA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTATTCCTTCAAAGAGTaGTTCAATTGGGCCACAGAT +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSYSFKE*FNWATD
Trigger: ATCTGTGGCCCAATTGAACAACTCTTTGAAGGAATA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTTATTCCTTCAAAGAGTaGTTCAATTGGGCCACAGAT +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGYSFKE*FNWATD
Trigger: ATCTGTGGCCCAATTGAACAACTCTTTGAAGGAATA...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACACAGAATCCTGCAGTaGTTGAAGAAGACTTTCGTG +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAHRILQ*LKKTFV
Trigger: CACGAAAGTCTTCTTCAACAACTGCAGGATTCTGTG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGTTAAGACATTCTGTTaGTTCCAGTGGCTTAATGGC +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWVKTFC*FQWLNG
Trigger: GCCATTAAGCCACTGGAACAAACAGAATGTCTTAAC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCGCCCCAGTTTCTGTTTaGTTAAGACATTCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSAPVSV*LRHSVC
Trigger: ACAAACAGAATGTCTTAACAAAACAGAAACTGGGGC...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTCAACAAGGCTTTCATaGAAGATTCAACTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSSTRLS*KIQLQQ
Trigger: TTGCTGCAGTTGAATCTTCAATGAAAGCCTTGTTGA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACCAACCATGTTCAAGTaGCTTAATCTGGCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGPTMFK*LNLAFQ
Trigger: TTGGAAAGCCAGATTAAGCAACTTGAACATGGTTGG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGTCACCCAACAAATTCTaGGCCCATAAGATAGTCTCT +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWSPNKF*AHKIVS
Trigger: AGAGACTATCTTATGGGCCAAGAATTTGTTGGGTGA...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCTAGGAACCTTATCTTaGACCTCTTCAGCCAACGAT +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHLGTLS*TSSAND
Trigger: ATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCTTAAAATTTGGGCATaGAGCCGTCTGCTTTCCGGA +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQLKIWA*SRLLSG
Trigger: TCCGGAAAGCAGACGGCTCAATGCCCAAATTTTAAG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCATCATTCAAGACATTaGTGCGCAAATCAATGCTTG +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGHHSRH*CANQCL
Trigger: CAAGCATTGATTTGCGCACAAATGTCTTGAATGATG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCAGTTTCCTGTGCTTaGAAAGCTTCCTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSVSCA*KASFIA
Trigger: AGCAATGAAGGAAGCTTTCAAAGCACAGGAAACTGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTTTGACACCAAGGCCTaGCTCTGTTCCAAGCGCTCT +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDFDTKA*LCSKRS
Trigger: AGAGCGCTTGGAACAGAGCAAGGCCTTGGTGTCAAA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCTATTTTTCTCCTCATaGCATATGATGGTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWLFFSS*HMMVSF
Trigger: AAAGCTCACCATCATATGCAATGAGGAGAAAAATAG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGGTTTCATTCCTGTTaGGGGCAACCTCAGTTCCAC +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSRFHSC*GQPQFH
Trigger: GTGGAACTGAGGTTGCCCCAAACAGGAATGAAACCT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGTAGTTGTGGCAGCTaGTCAGCTTGGTCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDCSCGS*SAWSGD
Trigger: GTCACCAGACCAAGCTGACAAGCTGCCACAACTACA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGTCTGGTGTGAGGATTaGTGCCATGGAATTATCAGA +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAVWCED*CHGIIR
Trigger: TCTGATAATTCCATGGCACAAATCCTCACACCAGAC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGTTCATGATGCAGATATaGCCACTTATCTCCATTTTG +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWFMMQI*PLISIL
Trigger: CAAAATGGAGATAAGTGGCAATATCTGCATCATGAA...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAGTAGAATACCCATATTaGTGGAAACCTGAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAVEYPY*WKPEAP
Trigger: TGGAGCCTCAGGTTTCCACAAATATGGGTATTCTAC...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTCATGGTCAATTTTCTaGTTCAGGGACAACCACTGC +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSWSIF*FRDNHC
Trigger: GCAGTGGTTGTCCCTGAACAAGAAAATTGACCATGA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCTTGAATATCTGGAAGTaGAGTTATGAGCATTGTCCA +
Preference number: 5 (lower is better)
Translates to: EPVLGKPRRSLHRSRDLALNIWK*SYEHCP
Trigger: TGGACAATGCTCATAACTCAACTTCCAGATATTCAA...GGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTGTGCTTCCAGCCAGTaGTTCAAGATCTGTATTTTA +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCCASSQ*FKICIL
Trigger: TAAAATACAGATCTTGAACAACTGGCTGGAAGCACA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCACTTCATCATAGAGTaGATCATAAATCTTCCACTC +
Preference number: 5 (lower is better)
Translates to: WGHVLGTLGNQAGGVALWHFIIE*IINLPL
Trigger: GAGTGGAAGATTTATGATCAACTCTATGATGAAGTG...CCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TCGCCTTCTGTAGTTCTCACTGCTCTGAACTGCTTTGCTCGGGGAGCTGGCACGGATGTTTGCGAGCTGTaGAAACTTTGCTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: SPSVVLTALNCFARGAGTDVCEL*KLCFLL
Trigger: CAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACATC...CGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAAGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGGAGAAAGGCTTCTTTaGTTTTCTGCACATCATGCT +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWGERLL*FSAHHA
Trigger: AGCATGATGTGCAGAAAACAAAAGAAGCCTTTCTCC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGCTGGACTCTGCGGGTaGTGGGAGTCGATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCAGLCG*WESIQD
Trigger: GTCCTGGATCGACTCCCACAACCCGCAGAGTCCAGC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCACCAGCTGTCCTGAAGTaGACTGATTCTCCTACCCAC +
Preference number: 5 (lower is better)
Translates to: RSLPVYAKNQSGFLWGLPPAVLK*TDSPTH
Trigger: GTGGGTAGGAGAATCAGTCAACTTCAGGACAGCTGG...TGGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGTGCAAATGCTCTATTaGCTCCTTCAAAACCATCAC +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWVQMLY*LLQNHH
Trigger: GTGATGGTTTTGAAGGAGCAAATAGAGCATTTGCAC...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCGATCGTTAATTTTGTaGAGCTTGTCATCGATCTCA +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSRSLIL*SLSSIS
Trigger: TGAGATCGATGACAAGCTCAACAAAATTAACGATCG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCCAACGATCGTTAATTTaGTTGAGCTTGTCATCGATC +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSQRSLI*LSLSSI
Trigger: GATCGATGACAAGCTCAACAAAATTAACGATCGTTG...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTCAACGATCGTTAATTTaGTTGAGCTTGTCATCGATC +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCQRSLI*LSLSSI
Trigger: GATCGATGACAAGCTCAACAAAATTAACGATCGTTG...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGCATGAGCGACTGTCGTAAGCCCCCTCTCCAGCTGTCCACTGCGCCCTGTGCTCAACGATCGTTAATTTaGTTGAGCTTGTCATCGATC +
Preference number: 5 (lower is better)
Translates to: CMSDCRKPPLQLSTAPCAQRSLI*LSLSSI
Trigger: GATCGATGACAAGCTCAACAAAATTAACGATCGTTG...AGCACAGGGCGCAGTGGACAGCTGGAGAGGGGGCTTACGACAGTCGCTCATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAACCAGGTGCGAAGGTaGCTCATGTTTTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQNQVRR*LMFLSN
Trigger: GTTGGACAAAAACATGAGCAACCTTCGCACCTGGTT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTTCAGTTGGCGCATCTaGTCATCGGCGTCACTCTCT +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDFSWRI*SSASLS
Trigger: AGAGAGTGACGCCGATGACAAGATGCGCCAACTGAA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TCGCCTTCTGTAGTTCTCACTGCTCTGAACTGCTTTGCTCGGGGAGCTGGCACGGTTTGCAGAAATTCCTaGCTGCTCACGTTGACAGAG +
Preference number: 5 (lower is better)
Translates to: SPSVVLTALNCFARGAGTVCRNS*LLTLTE
Trigger: CTCTGTCAACGTGAGCAGCAAGGAATTTCTGCAAAC...CGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAAGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTTCGGGGCTCTCGGTTaGCAGAAATTCCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDFGALG*QKFLAA
Trigger: AGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGAA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACCACAGCAGCAGATTTaGACTCAACTGGTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSPQQQI*TQLVEV
Trigger: GACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTGG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATGAGAAGGGAGCTGGCACGGATGTaGCAGGAGGCTGGTCCCCCG +
Preference number: 5 (lower is better)
Translates to: CTFSSASIQSSPCPLMRRELARM*QEAGPP
Trigger: CGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTC...CCTTCTCATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCACGTGCTGGGCACCCTaGGCAATCAGGCAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCTCWAP*AIRQVV
Trigger: CACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGAATTCACAAAGTGCTaGGCTCTTCAGGAAACTGAC +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHEFTKC*ALQETD
Trigger: GTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS TCA 90 bp AAGGAGCACGCAGTTATGGGTGAGTACGGCAGTGTAAATACACCATaGCACAAGGACCAAGGCGCATGGTGTCCACAGAAGGCAGAGGTA +
Preference number: 5 (lower is better)
Translates to: KEHAVMGEYGSVNTP*HKDQGAWCPQKAEV
Trigger: TACCTCTGCCTTCTGTGGACACCATGCGCCTTGGTCCTTGTGTCATGGTGTATTTACACTGCCGTACTCACCCATAACTGCGTGCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS TCA 90 bp GGGGAGGGGGAAGGGATAGCATTGGGAGATATACCTAATGCTAGATaGCGAGTTAGTGGGTACGGTGCACCAGCATGGCACATGTATGCA +
Preference number: 5 (lower is better)
Translates to: GEGEGIALGDIPNAR*RVSGYGAPAWHMYA
Trigger: TGCATACATGTGCCATGCTGGTGCACCGTACCCACTAACTCGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTTCCCCCTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557060.1
CDS GCA 90 bp TCTGGCCCTCTAATTCAGGACAGCTCACAGACGCCACCAACTGTTTaGCTTCGTTCAGAGTTTGGTAAAGCCGGGCGTGTTTTCCACCAA +
Preference number: 5 (lower is better)
Translates to: SGPLIQDSSQTPPTV*LRSEFGKAGRVFHQ
Trigger: TTGGTGGAAAACACGCCCGGCTTTACCAAACTCTGAACGAAGGCAAACAGTTGGTGGCGTCTGTGAGCTGTCCTGAATTAGAGGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
CDS GCA 90 bp GGCCTTCCAGAGCTGGAGCAGACTCTGGGCCTTCTGCAACTGGTCTaGAATGGCTTGGTTCACCTGAGTCCACCTTTTATGAGTATTTTG +
Preference number: 5 (lower is better)
Translates to: GLPELEQTLGLLQLV*NGLVHLSPPFMSIL
Trigger: CAAAATACTCATAAAAGGTGGACTCAGGTGAACCAAGCCATTGCAGACCAGTTGCAGAAGGCCCAGAGTCTGCTCCAGCTCTGGAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS GCA 90 bp TCAGTGAGGAAGCGAAACAAGTTCTCCACAGAAGTAGTGAAATCTTaGCACTGCCTCACCAGCCCATCAACGTCACCCTTCCTCTGCCGA +
Preference number: 5 (lower is better)
Translates to: SVRKRNKFSTEVVKS*HCLTSPSTSPFLCR
Trigger: TCGGCAGAGGAAGGGTGACGTTGATGGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTCTGTGGAGAACTTGTTTCGCTTCCTCACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 90 bp GTGGGTTGCCATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTaGCTGGAGGTAATAGTAGCTTTCCCTAGAATGAGCCAGTTTTTA +
Preference number: 5 (lower is better)
Translates to: VGCHSGLAGLLCHHP*LEVIVAFPRMSQFL
Trigger: TAAAAACTGGCTCATTCTAGGGAAAGCTACTATTACCTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATGGCAACCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554928.1
CDS CCA 90 bp CCAATCTTCACCAGTTCCACCATGCCTTGCAACAAAGCATCTTGCTaGCTCTCAGTGACGAAAGGGCTGCTGAGTTCTGTGTACCTGGCT +
Preference number: 5 (lower is better)
Translates to: PIFTSSTMPCNKASC*LSVTKGLLSSVYLA
Trigger: AGCCAGGTACACAGAACTCAGCAGCCCTTTCGTCACTGAGAGCCAGCAAGATGCTTTGTTGCAAGGCATGGTGGAACTGGTGAAGATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
CDS CCA 90 bp GGTTTTCCAAATGGGCTTTGTACCCACCTTTATGTCCTGCAGGGCTaGGGGCAGGATCTCTGCCAGGTTGTTTCCAGACATGCTGATGTT +
Preference number: 5 (lower is better)
Translates to: GFPNGLCTHLYVLQG*GQDLCQVVSRHADV
Trigger: AACATCAGCATGTCTGGAAACAACCTGGCAGAGATCCTGCCCCCAGCCCTGCAGGACATAAAGGTGGGTACAAAGCCCATTTGGAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATCTCTCAGATTGTCTTaGTTGGATCTATGCTTCACA +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGSLRLS*LDLCFT
Trigger: TGTGAAGCATAGATCCAACAAAGACAATCTGAGAGA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAAGGCCTCTCTCAGATaGTCTTTGTTGGATCTATGC +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQKASLR*SLLDLC
Trigger: GCATAGATCCAACAAAGACAATCTGAGAGAGGCCTT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTCTATCCATCAGGCTCTaGAATAAAGTCATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGLSIRL*NKVIFS
Trigger: AGAGAAAATGACTTTATTCAAGAGCCTGATGGATAG...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATCTTTGATGAGACCCTaGGTCCTTCCTCTACGGATA +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSLMRP*VLPLRI
Trigger: TATCCGTAGAGGAAGGACCAAGGGTCTCATCAAAGA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACCTGAATTTGTTGTTTaGCAGGTGGTGTTCAAGAAT +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTPEFVV*QVVFKN
Trigger: ATTCTTGAACACCACCTGCAAAACAACAAATTCAGG...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACAAGCCTCTAGTAATTaGTTTTCCTCAGTGAATTCC +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGQASSN*FSSVNS
Trigger: GGAATTCACTGAGGAAAACAAATTACTAGAGGCTTG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCAGGTATTTCACTGCTTaGGAGCAAAAACTGTATTTC +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSRYFTA*EQKLYF
Trigger: GAAATACAGTTTTTGCTCCAAAGCAGTGAAATACCT...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGGTATTTCACTGCTTaGGAGCAAAAACTGTATTTC +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCRYFTA*EQKLYF
Trigger: GAAATACAGTTTTTGCTCCAAAGCAGTGAAATACCT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCACAGAATCCTGCAGTaGTTGAAGAAGACTTTCGTG +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQHRILQ*LKKTFV
Trigger: CACGAAAGTCTTCTTCAACAACTGCAGGATTCTGTG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACAGCCCCAGTTTCTGTTTaGTTAAGACATTCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTAPVSV*LRHSVC
Trigger: ACAAACAGAATGTCTTAACAAAACAGAAACTGGGGC...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGCTGCTGCAAGGAGTCTTCAAGCTCCTTTGCTCGAGCCTGGCATATGGACTCCATGTTGCTGCTGCTGTaGCAGAGAAATCTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SCCKESSSSFARAWHMDSMLLLL*QRNLSV
Trigger: GACACTGAGATTTCTCTGCAACAGCAGCAGCAACAT...GGAGTCCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACTCCTTGCAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATACAGAAAATCCATGCTaGGTAGCCTGGAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDTENPC*VAWRSV
Trigger: CACTGACCTCCAGGCTACCAAGCATGGATTTTCTGT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTATAGTCTCTTTCATCTaGTTCCTTATGTCACACTTC +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCIVSFI*FLMSHF
Trigger: GAAGTGTGACATAAGGAACAAGATGAAAGAGACTAT...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTCACCCAACAAATTCTaGGCCCATAAGATAGTCTCT +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSPNKF*AHKIVS
Trigger: AGAGACTATCTTATGGGCCAAGAATTTGTTGGGTGA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCGTGCTGGGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACATTAAGTAATAGTTCATaGCGCTGTATACTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: PCWVSPEEVCTGPGTLPTLSNSS*RCILSA
Trigger: GGCTGACAGTATACAGCGCAATGAACTATTACTTAA...TGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACCCAGCACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCAAACTCACGTAGTTTaGTCTCCACATCACTCGCTT +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQQTHVV*SPHHSL
Trigger: AAGCGAGTGATGTGGAGACAAAACTACGTGAGTTTG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTGGTGGCTGCCTCTTTaGTTTTGGAAATTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQWWLPL*FWKFQG
Trigger: TCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGAAGGAATGTCTTTCTaGGATTTCAGTCTGCACCAA +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHEGMSF*DFSLHQ
Trigger: TTGGTGCAGACTGAAATCCAAGAAAGACATTCCTTC...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGGTTATCCATCCATTCTaGAGCCTGTCCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKEVIHPF*SLSWVL
Trigger: CAGGACCCAGGACAGGCTCAAGAATGGATGGATAAC...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTGCCACGTTGGCTTGTaGCAGCCACAGCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCCHVGL*QPQLQL
Trigger: GAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGGCTCAACTGCCACGTaGGCTTGTTGCAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSGSTAT*ACCSHS
Trigger: GCTGTGGCTGCAACAAGCCAACGTGGCAGTTGAGCC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAACAGAAAGGCAACCTaGTGCTCAATCTCTGTTAGC +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQNRKAT*CSISVS
Trigger: GCTAACAGAGATTGAGCACAAGGTTGCCTTTCTGTT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCACTGTGGCCAGCTATGCCCTTTTTGTCTGCTGAATaGTGGCCTTTCAGTTACAAT +
Preference number: 5 (lower is better)
Translates to: LGTLGNQAGGVALWPAMPFLSAE*WPFSYN
Trigger: ATTGTAACTGAAAGGCCACAATTCAGCAGACAAAAA...GGGCATAGCTGGCCACAGTGCTACACCACCTGCCTGATTGCCAAGGGTGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGATGCCTGGTTGCTaGCAGATGATTCCTGAGTTG +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDWMPGC*QMIPEL
Trigger: CAACTCAGGAATCATCTGCAAGCAACCAGGCATCCA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATTGCAACAAAGCATCTaGCTGGCTCTCAGTGACGAA +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSLQQSI*LALSDE
Trigger: TTCGTCACTGAGAGCCAGCAAGATGCTTTGTTGCAA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCAGTTCCACCATGCCTaGCAACAAAGCATCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDQFHHA*QQSILL
Trigger: CAGCAAGATGCTTTGTTGCAAGGCATGGTGGAACTG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAACGCCACTTTACTTTaGGTTTGTTTTAAGTGGCCA +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWNATLL*VCFKWP
Trigger: TGGCCACTTAAAACAAACCAAAAGTAAAGTGGCGTT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTAGCTTTAACTTCTGTTACTaGTTCTGCCCAAAATGTCTC +
Preference number: 5 (lower is better)
Translates to: IGLGPRAGHPWQSGRWCSFNFCY*FCPKCL
Trigger: GAGACATTTTGGGCAGAACAAGTAACAGAAGTTAAA...GCTACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTGTTTTAACTTCTGTTACTaGTTCTGCCCAAAATGTCTC +
Preference number: 5 (lower is better)
Translates to: QIGLGPRAGHPWQSGRWCFNFCY*FCPKCL
Trigger: GAGACATTTTGGGCAGAACAAGTAACAGAAGTTAAA...ACACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTCATGGTCAATTTTCTaGTTCAGGGACAACCACTGC +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSWSIF*FRDNHC
Trigger: GCAGTGGTTGTCCCTGAACAAGAAAATTGACCATGA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCGGCAATTTCTCCATTaGAAGCTGGTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHRQFLH*KLVKFF
Trigger: GAAAAACTTCACCAGCTTCAAATGGAGAAATTGCCG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATGTGCTTCCAGCCAGTaGTTCAAGATCTGTATTTTA +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGCASSQ*FKICIL
Trigger: TAAAATACAGATCTTGAACAACTGGCTGGAAGCACA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGCAGGTGGTAGTACCAGAATCGGATaGTCATCATATTCACTTCAT +
Preference number: 5 (lower is better)
Translates to: LRLVWGHVLGTLGNQAGGSTRIG*SSYSLH
Trigger: ATGAAGTGAATATGATGACAATCCGATTCTGGTACT...ACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAGATGTTTGCGAGCTGTaGAAACTTTGCTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSDVCEL*KLCFLL
Trigger: CAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACATC...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACCAGGACACTGGAATTTaGGAGAAAGGCTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHQDTGI*EKGFFC
Trigger: ACAAAAGAAGCCTTTCTCCAAAATTCCAGTGTCCTG...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGAATACAACCCATGTATaGAGTCTGTCTTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: PGTLPTLSHSDWSGATCWNTTHV*SLSSIS
Trigger: GGAGATTGAAGACAGACTCAATACATGGGTTGTATT...CCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGCTGCTCTTGATTTGTaGCTGGCCTTGATCAACTGG +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDAALDL*LALINW
Trigger: CCAGTTGATCAAGGCCAGCAACAAATCAAGAGCAGC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTGGATTTCTCTGGGGTCTTCCAGCTGCTCTTGATTTGTaGCTGGCCTTGATCAACTGG +
Preference number: 5 (lower is better)
Translates to: RSLPVYAKNQSGFLWGLPAALDL*LALINW
Trigger: CCAGTTGATCAAGGCCAGCAACAAATCAAGAGCAGC...TGGAAGACCCCAGAGAAATCCAGACTGATTCTTGGCGTAAACGGGGAGAGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCTCTTCAGTTCCTCTTaGGCACTCGTGTACAACACC +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDLFSSS*ALVYNT
Trigger: GGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGAG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCACGTCTCCTCGATTTTCATGCGCCGCTCCATGGACATGGCACAAATGTTCCTCTCTTCAGTTCCTCTTaGGCACTCGTGTACAACACC +
Preference number: 5 (lower is better)
Translates to: PRLLDFHAPLHGHGTNVPLFSSS*ALVYNT
Trigger: GGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGAG...AGGAACATTTGTGCCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATATCAGAGGGAGGCTTaGCCATCTTTAACATTTCCA +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAYQREA*PSLTFP
Trigger: TGGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ACTGAGGAGATGACGGTTCCTCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTCCACAGCAGCAGATTTaGACTCAACTGGTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: TEEMTVPRSLPVYAKNQSPQQQI*TQLVEV
Trigger: GACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTGG...AGACTGATTCTTGGCGTAAACGGGGAGAGAGCGAGGAACCGTCATCTCCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCTGGCACGGATGTaGCAGGAGGCTGGTCCCCCG +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPELARM*QEAGPP
Trigger: CGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGAGCTGGCACGGATGTaGCAGGAGGCTGGTCCCCCG +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGELARM*QEAGPP
Trigger: CGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCTGCCCGGACCACCCTaGAGAGGAAGGAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELPGPP*RGRSAV
Trigger: CACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCTGCCCGGACCACCCTaGAGAGGAAGGAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRLPGPP*RGRSAV
Trigger: CACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGGAATTCACAAAGTGCTaGGCTCTTCAGGAAACTGAC +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQEFTKC*ALQETD
Trigger: GTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTC...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS TCA 90 bp ATCTCTGCCAGGTTGTTTCCAGACATGCTGATGTTTGCGAGCTGTTaGAACTTTGCTTCCTGCTGCTTCAGCCTTGCGGCAGCTTCACCA +
Preference number: 5 (lower is better)
Translates to: ISARLFPDMLMFASC*NFASCCFSLAAASP
Trigger: TGGTGAAGCTGCCGCAAGGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACATCAGCATGTCTGGAAACAACCTGGCAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS GCA 90 bp GTTGTAATCGAGGCCAGCTTTCAGGGACTTGCTTCTACAGACAGCTaGAGCCTGAGTGTGCTCCAGGCAGACTTGAAGGTTGTCAAAACA +
Preference number: 5 (lower is better)
Translates to: VVIEASFQGLASTDS*SLSVLQADLKVVKT
Trigger: TGTTTTGACAACCTTCAAGTCTGCCTGGAGCACACTCAGGCTGCAGCTGTCTGTAGAAGCAAGTCCCTGAAAGCTGGCCTCGATTACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
CDS GCA 90 bp TTCCCAATCTTCACCAGTTCCACCATGCCTTGCAACAAAGCATCTTaGTGGCTCTCAGTGACGAAAGGGCTGCTGAGTTCTGTGTACCTG +
Preference number: 5 (lower is better)
Translates to: FPIFTSSTMPCNKAS*WLSVTKGLLSSVYL
Trigger: CAGGTACACAGAACTCAGCAGCCCTTTCGTCACTGAGAGCCAGCAAGATGCTTTGTTGCAAGGCATGGTGGAACTGGTGAAGATTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
CDS CCA 90 bp GACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCATCCGAAATaGATTTACCTGAAACGAAAGACAGCAAGCGACAGTCTATTCTCT +
Preference number: 5 (lower is better)
Translates to: DRKGCREHATSGHPK*IYLKRKTASDSLFS
Trigger: AGAGAATAGACTGTCGCTTGCTGTCTTTCGTTTCAGGTAAATCCATTTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCTGGATCGCGCCTTTaGCTCGCTCTCCCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSGSRL*LALPLA
Trigger: AGCGAGAGGGAGAGCGAGCAAAAGGCGCGATCCAGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTCTGGATCGCGCCTTTaGCTCGCTCTCCCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSGSRL*LALPLA
Trigger: AGCGAGAGGGAGAGCGAGCAAAAGGCGCGATCCAGA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCTCAGATTGTCTTTGTaGGATCTATGCTTCACACTC +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQLRLSL*DLCFTL
Trigger: GAGTGTGAAGCATAGATCCAACAAAGACAATCTGAG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACCTGAATTTGTTGTTTaGCAGGTGGTGTTCAAGAAT +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAPEFVV*QVVFKN
Trigger: ATTCTTGAACACCACCTGCAAAACAACAAATTCAGG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACAAGCCTCTAGTAATTaGTTTTCCTCAGTGAATTCC +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAQASSN*FSSVNS
Trigger: GGAATTCACTGAGGAAAACAAATTACTAGAGGCTTG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCAAGACTACTGTATTTaGGCACTGTTGATTCACGGT +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQQDYCI*ALLIHG
Trigger: ACCGTGAATCAACAGTGCCAAAATACAGTAGTCTTG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGGCTAAATGGAGTGTGTaGTCCCACTGGTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKEAKWSV*SHWLLM
Trigger: CATCAGCAACCAGTGGGACAACACACTCCATTTAGC...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTGGTCTGGGGCCACTCAACAAGGCTTTCATaGAAGATTCAACTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: HRSRDLANTKSLRLVWGHSTRLS*KIQLQQ
Trigger: TTGCTGCAGTTGAATCTTCAATGAAAGCCTTGTTGA...GTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGAGCCGACACAATCTaGAGCAAACATATGCCATCA +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSRADTI*SKHMPS
Trigger: TGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATGGTGGCTGCCTCTTTaGTTTTGGAAATTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSWWLPL*FWKFQG
Trigger: TCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACTATTTTTCTCCTCATaGCATATGATGGTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGLFFSS*HMMVSF
Trigger: AAAGCTCACCATCATATGCAATGAGGAGAAAAATAG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATCCAGCTCATTTAGTTaGGAATGCCATAGATCTAAC +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASSSFS*ECHRSN
Trigger: GTTAGATCTATGGCATTCCAAACTAAATGAGCTGGA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGATTTTTGTCTGCTGAATaGTGGCCTTTCAGTTACAAT +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGFLSAE*WPFSYN
Trigger: ATTGTAACTGAAAGGCCACAATTCAGCAGACAAAAA...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGAAATCTTTCTGTTCCATaGGTTTTAACTCCAGAACCT +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGNLSVP*VLTPEP
Trigger: AGGTTCTGGAGTTAAAACCAATGGAACAGAAAGATT...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATTTGGCAGAGTATGCTaGGATCAACAACATGTCAGC +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSFGRVC*DQQHVS
Trigger: GCTGACATGTTGTTGATCCAAGCATACTCTGCCAAA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GTTCCCTGCTCCTGGGGAGGAACACAATCTGAAAGCTGCCCTGGGCTCCAGGGACACTTCATCATAGAGTaGATCATAAATCTTCCACTC +
Preference number: 5 (lower is better)
Translates to: VPCSWGGTQSESCPGLQGHFIIE*IINLPL
Trigger: GAGTGGAAGATTTATGATCAACTCTATGATGAAGTG...TCCCTGGAGCCCAGGGCAGCTTTCAGATTGTGTTCCTCCCCAGGAGCAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TCGCCTTCTGTAGTTCTCACTGCTCTGAACTGCTTTGCTCGGGGAGCTGGCACGGGAGAAAGGCTTCTTTaGTTTTCTGCACATCATGCT +
Preference number: 5 (lower is better)
Translates to: SPSVVLTALNCFARGAGTGERLL*FSAHHA
Trigger: AGCATGATGTGCAGAAAACAAAAGAAGCCTTTCTCC...CGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAAGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCAGGACACTGGAATTTaGGAGAAAGGCTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQQDTGI*EKGFFC
Trigger: ACAAAAGAAGCCTTTCTCCAAAATTCCAGTGTCCTG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGCTGGACTCTGCGGGTaGTGGGAGTCGATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRAGLCG*WESIQD
Trigger: GTCCTGGATCGACTCCCACAACCCGCAGAGTCCAGC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTTGTAGTGATGCTCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTGGCCCAAACTCAAATTCATTaGCTTTCACAAGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: LVVMLGTGRAVGNMPRVAQTQIH*LSQAAS
Trigger: AGATGCTGCTTGTGAAAGCAAATGAATTTGAGTTTG...GGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGAGCATCACTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp TCGCCTTCTGTAGTTCTCACTGCTCTGAACTGCTTTGCTCGGGGAGCTGGCACGGTGCAAATGCTCTATTaGCTCCTTCAAAACCATCAC +
Preference number: 5 (lower is better)
Translates to: SPSVVLTALNCFARGAGTVQMLY*LLQNHH
Trigger: GTGATGGTTTTGAAGGAGCAAATAGAGCATTTGCAC...CGTGCCAGCTCCCCGAGCAAAGCAGTTCAGAGCAGTGAGAACTACAGAAGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATGCTGTCTGTAGAACTTaGTTTTCCATCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDAVCRT*FSICTS
Trigger: GCTGGTGCAGATGGAAAACAAAGTTCTACAGACAGC...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCACGTCTCCTCGATTTTCATGCGCCGCTCCATGGACATGGCACAAATGTTCCTGCTGTCTGTAGAACTTaGTTTTCCATCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: PRLLDFHAPLHGHGTNVPAVCRT*FSICTS
Trigger: GCTGGTGCAGATGGAAAACAAAGTTCTACAGACAGC...AGGAACATTTGTGCCATGTCCATGGAGCGGCGCATGAAAATCGAGGAGACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATTAATTTTGTTGAGCTaGTCATCGATCTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLALILLS*SSISAA
Trigger: AGCAGCTGAGATCGATGACAAGCTCAACAAAATTAA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCACAACGATCGTTAATTTaGTTGAGCTTGTCATCGATC +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLAQRSLI*LSLSSI
Trigger: GATCGATGACAAGCTCAACAAAATTAACGATCGTTG...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTTGTCCCAGCGCTGGTaGCCCTCGTGGACCATCTGC +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELSQRW*PSWTIC
Trigger: GCAGATGGTCCACGAGGGCAACCAGCGCTGGGACAA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTTGTCCCAGCGCTGGTaGCCCTCGTGGACCATCTGC +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKILSQRW*PSWTIC
Trigger: GCAGATGGTCCACGAGGGCAACCAGCGCTGGGACAA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGAGAAGTGCTCCACGTaGGTCAGCTGCAGGTCCATC +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCEKCST*VSCRSI
Trigger: GATGGACCTGCAGCTGACCAACGTGGAGCACTTCTC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GTAATTTCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCTTGGAAGCCATTCAGTaGGCGCATCTTGTCATCGGC +
Preference number: 5 (lower is better)
Translates to: VISCWKPFSWRILSSASLLEAIQ*AHLVIG
Trigger: GCCGATGACAAGATGCGCCAACTGAATGGCTTCCAA...GAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGAAATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTACTCGCGGGCCTTCTTaGCCACCATCCGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSTRGPS*PPSVPG
Trigger: TCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTCTTCCTGCTGTGGGTaGCCATTCAGGACTCGCGGG +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSSCCG*PFRTRG
Trigger: CCCGCGAGTCCTGAATGGCAACCCACAGCAGGAAGA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCTCTGAGGTTTGCAGAAATTCCTaGCTGCTCACGTTGACAGAG +
Preference number: 5 (lower is better)
Translates to: SCWKPFSWRILSSASLSEVCRNS*LLTLTE
Trigger: CTCTGTCAACGTGAGCAGCAAGGAATTTCTGCAAAC...CTCAGAGAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCTGGCGGAGTCTACTTaGGAGCTCTGTGGATTCGGG +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCLAEST*ELCGFG
Trigger: CCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACTGCCCGGACCACCCTaGAGAGGAAGGAGCGCTGTG +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKLPGPP*RGRSAV
Trigger: CACAGCGCTCCTTCCTCTCAAGGGTGGTCCGGGCAG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTACGTGCTGGGCACCCTaGGCAATCAGGCAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSTCWAP*AIRQVV
Trigger: CACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS TCA 90 bp CTGAGGGAGAAGTGTGCCTGGCCAACTGTGAGTTTATCCAGCACGTaGAGGCTTTCTTCTGGGTGTCTTCCTGTTCAGCTTGCAATGAAA +
Preference number: 5 (lower is better)
Translates to: LREKCAWPTVSLSST*RLSSGCLPVQLAMK
Trigger: TTTCATTGCAAGCTGAACAGGAAGACACCCAGAAGAAAGCCTTCACGTGCTGGATAAACTCACAGTTGGCCAGGCACACTTCTCCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS TCA 90 bp GCTGTCGGGAACATGCCACGAGTGGCCATCCGAAATGGATTTACCTaGAACGAAAGACAGCAAGCGACAGTCTATTCTCTCCTACTGAAC +
Preference number: 5 (lower is better)
Translates to: AVGNMPRVAIRNGFT*NERQQATVYSLLLN
Trigger: GTTCAGTAGGAGAGAATAGACTGTCGCTTGCTGTCTTTCGTTTCAGGTAAATCCATTTCGGATGGCCACTCGTGGCATGTTCCCGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS TCA 90 bp CATCCCCAAACTGCAATGGCAGCAGAGGGCCTAATTCACCAGTCCTaGTGCCAGCTACAGAACAGGCTTTCAAGTTCATTACATAGCAGC +
Preference number: 5 (lower is better)
Translates to: HPQTAMAAEGLIHQS*CQLQNRLSSSLHSS
Trigger: GCTGCTATGTAATGAACTTGAAAGCCTGTTCTGTAGCTGGCATCAGGACTGGTGAATTAGGCCCTCTGCTGCCATTGCAGTTTGGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS GCA 90 bp AGCCTGTGGAGCTCATGGTCAATTTTCTTGTTCAGGGACAACCACTaGTCTTCCAGTTTTGCGATCTGGCCCTCTAATTCAGGACAGCTC +
Preference number: 5 (lower is better)
Translates to: SLWSSWSIFLFRDNH*SSSFAIWPSNSGQL
Trigger: GAGCTGTCCTGAATTAGAGGGCCAGATCGCAAAACTGGAAGAGCAGTGGTTGTCCCTGAACAAGAAAATTGACCATGAGCTCCACAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
CDS GCA 90 bp CAGGTTGTTTCCAGACATGCTGATGTTTGCGAGCTGTTGAAACTTTaGTTCCTGCTGCTTCAGCCTTGCGGCAGCTTCACCATGAGCATT +
Preference number: 5 (lower is better)
Translates to: QVVSRHADVCELLKL*FLLLQPCGSFTMSI
Trigger: AATGCTCATGGTGAAGCTGCCGCAAGGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACATCAGCATGTCTGGAAACAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS GCA 90 bp CCATCAACGTCACCCTTCCTCTGCCGAACACCCTGGACAGCATTCTaGCACCGATCCGTCAGCTTTGAGAATTCTGTAATAAATTCTGGT +
Preference number: 5 (lower is better)
Translates to: PSTSPFLCRTPWTAF*HRSVSFENSVINSG
Trigger: ACCAGAATTTATTACAGAATTCTCAAAGCTGACGGATCGGTGGCAGAATGCTGTCCAGGGTGTTCGGCAGAGGAAGGGTGACGTTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 90 bp CTTTCAAGTTCATTACATAGCAGCTGGAGTACATCAGCAATGTCTTaGAAAGCTGTCTCAGCAGCTGGGGGCAGGCTGTGGTTTAGGCAG +
Preference number: 5 (lower is better)
Translates to: LSSSLHSSWSTSAMS*KAVSAAGGRLWFRQ
Trigger: CTGCCTAAACCACAGCCTGCCCCCAGCTGCTGAGACAGCTTTGCAAGACATTGCTGATGTACTCCAGCTGCTATGTAATGAACTTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS CCA 90 bp TCCAGAGCTGGAGCAGACTCTGGGCCTTCTGCAACTGGTCTGCAATaGCTTGGTTCACCTGAGTCCACCTTTTATGAGTATTTTGGCATT +
Preference number: 5 (lower is better)
Translates to: SRAGADSGPSATGLQ*LGSPESTFYEYFGI
Trigger: AATGCCAAAATACTCATAAAAGGTGGACTCAGGTGAACCAAGCCATTGCAGACCAGTTGCAGAAGGCCCAGAGTCTGCTCCAGCTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTCTGGATCGCGCCTTTaGCTCGCTCTCCCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSSGSRL*LALPLA
Trigger: AGCGAGAGGGAGAGCGAGCAAAAGGCGCGATCCAGA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCATTTGCCATCTTGCTaGCACTTTAGAGCATTTCTT +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQHLPSC*HFRAFL
Trigger: AAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAATG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAACACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCATCAAACATAGAGCCTTaGGCAATAAGATGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: PTLSHSDWSGATCWAPLASNIEP*AIRCFK
Trigger: TTTGAAGCATCTTATTGCCAAAGGCTCTATGTTTGA...TGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCAACTGATAAGCTCCTTCACATGTGCTTTGGGCAGATGCTTCTTCACATGCAAGGCAATCATGCTTaGGTTCCCTGCCCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: EPTDKLLHMCFGQMLLHMQGNHA*VPCPFF
Trigger: GAAGAACGGGCAGGGAACCAAAGCATGATTGCCTTG...CATGTGAAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTTATCAGTTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCAAACTCACGTAGTTTaGTCTCCACATCACTCGCTT +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDQTHVV*SPHHSL
Trigger: AAGCGAGTGATGTGGAGACAAAACTACGTGAGTTTG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAGCTGCCTCTTTTGTTTaGGAAATTTCAGGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSAASFV*EISGSS
Trigger: AGAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGC...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTCTTCATCCCATTCATaGGTCTGTTTTATGACTACC +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSSSHS*VCFMTT
Trigger: GGTAGTCATAAAACAGACCAATGAATGGGATGAAGA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATACTCCTTCTTGTTCTaGCTTCAAATGCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSYSFLF*LQMLVK
Trigger: CTTCACCAGCATTTGAAGCAAGAACAAGAAGGAGTA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGTCTTTCTACTCCTTCTaGTTCTTGCTTCAAATGCTG +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSFYSF*FLLQML
Trigger: CAGCATTTGAAGCAAGAACAAGAAGGAGTAGAAAGA...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATCTTCTTCCATGTCCTaGTCATGCTTCCAAAGTGAA +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSSSMS*SCFQSE
Trigger: TTCACTTTGGAAGCATGACAAGGACATGGAAGAAGA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTCGGCCACCTGGGTCTaGCAGGCATGCAGGACTTCT +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESATWV*QACRTS
Trigger: AGAAGTCCTGCATGCCTGCAAGACCCAGGTGGCCGA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTCGGCCACCTGGGTCTaGCAGGCATGCAGGACTTCT +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSATWV*QACRTS
Trigger: AGAAGTCCTGCATGCCTGCAAGACCCAGGTGGCCGA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGGCTCAACTGCCACGTaGGCTTGTTGCAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEGSTAT*ACCSHS
Trigger: GCTGTGGCTGCAACAAGCCAACGTGGCAGTTGAGCC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACCTTCATCTCTTAGTTaGGCCACTCGGCTCTCGGCG +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKPSSLS*ATRLSA
Trigger: CGCCGAGAGCCGAGTGGCCAAACTAAGAGATGAAGG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACGGCAATTTCTCCATTaGAAGCTGGTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSRQFLH*KLVKFF
Trigger: GAAAAACTTCACCAGCTTCAAATGGAGAAATTGCCG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTTTCAGTCTCTCTTCTaGTGCTTCCAGCCAGTTGTT +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDFQSLF*CFQPVV
Trigger: AACAACTGGCTGGAAGCACAAGAAGAGAGACTGAAA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCTGGTCTGCAATGGCTaGGTTCACCTGAGTCCACCT +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCLVCNG*VHLSPP
Trigger: AGGTGGACTCAGGTGAACCAAGCCATTGCAGACCAG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCCTGCTGCTTCAGCCTaGCGGCAGCTTCACCATGAG +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIPAASA*RQLHHE
Trigger: CTCATGGTGAAGCTGCCGCAAGGCTGAAGCAGCAGG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCCTGCTGCTTCAGCCTaGCGGCAGCTTCACCATGAG +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSPAASA*RQLHHE
Trigger: CTCATGGTGAAGCTGCCGCAAGGCTGAAGCAGCAGG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAGGAGAAAGGCTTCTTTaGTTTTCTGCACATCATGCT +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSGERLL*FSAHHA
Trigger: AGCATGATGTGCAGAAAACAAAAGAAGCCTTTCTCC...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGCGATCGTTAATTTTGTaGAGCTTGTCATCGATCTCA +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQRSLIL*SLSSIS
Trigger: TGAGATCGATGACAAGCTCAACAAAATTAACGATCG...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACACACTCGGTCTCATTaGCACAGGCATCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSHTRSH*HRHRSR
Trigger: ACGACTCCGATGCCTGTGCAAATGAGACCGAGTGTG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGAGAAGTGCTCCACGTaGGTCAGCTGCAGGTCCATC +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLEKCST*VSCRSI
Trigger: GATGGACCTGCAGCTGACCAACGTGGAGCACTTCTC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAACTCGCGGGCCTTCTTaGCCACCATCCGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPTRGPS*PPSVPG
Trigger: TCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATATCAGAGGGAGGCTTaGCCATCTTTAACATTTCCA +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSYQREA*PSLTFP
Trigger: TGGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GTAATTTCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCCCACAGCAGCAGATTTaGACTCAACTGGTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: VISCWKPFSWRILSSASLPQQQI*TQLVEV
Trigger: GACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTGG...GAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGAAATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAACGTGCTGGGCACCCTaGGCAATCAGGCAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGTCWAP*AIRQVV
Trigger: CACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAACTAAGTCACTCAGATaGGTCTGGGGCCACGTGCTG +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSTKSLR*VWGHVL
Trigger: CAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCTCTGAGACTGAACAGAACATTTaGGTGTATAACCGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SCWKPFSWRILSSASLSETEQNI*VYNRQL
Trigger: GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGT...CTCAGAGAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS TCA 90 bp TTTCTCTTGTATCAGAGTCACGGCTTGAGAGTGATCCTGGGAGGCTaGCAAATCTTCATCCATAAGCTCTTCTACCTCCTGGAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: FLLYQSHGLRVILGG*QIFIHKLFYLLEPS
Trigger: GCTTGGCTCCAGGAGGTAGAAGAGCTTATGGATGAAGATTTGTCAGCCTCCCAGGATCACTCTCAAGCCGTGACTCTGATACAAGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS TCA 90 bp TCTTCTTCCATGTCCTTGTCATGCTTCCAAAGTGAAGACCAAGACTaGGGCGATGGCTCTGCCTTCTCATCTCCATTATCGCTCTTCACG +
Preference number: 5 (lower is better)
Translates to: SSSMSLSCFQSEDQD*GDGSAFSSPLSLFT
Trigger: CGTGAAGAGCGATAATGGAGATGAGAAGGCAGAGCCATCGCCTCAGTCTTGGTCTTCACTTTGGAAGCATGACAAGGACATGGAAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553308.1
ENST00000555002.6
ENST00000555323.1
CDS TCA 90 bp AAGTGGGAGCTTGAGGCTCACTTCATTCAAATGTTCAATATCAGGTaGTTGGGCTGTCAGTGCCAGCACATGATTCTGCAACACGGCCAG +
Preference number: 5 (lower is better)
Translates to: KWELEAHFIQMFNIR*LGCQCQHMILQHGQ
Trigger: CTGGCCGTGTTGCAGAATCATGTGCTGGCACTGACAGCCCAATCACCTGATATTGAACATTTGAATGAAGTGAGCCTCAAGCTCCCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556342.1
CDS GCA 90 bp ACCCTTAAGCAGAGGTCCTCCCATTGTCTGTGCAAATGCTCTATTTaGTCCTTCAAAACCATCACATCTTCCACGAGAACGTGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: TLKQRSSHCLCKCSI*SFKTITSSTRTCRV
Trigger: AACCCGGCACGTTCTCGTGGAAGATGTGATGGTTTTGAAGGAGCAAATAGAGCATTTGCACAGACAATGGGAGGACCTCTGCTTAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS CCA 90 bp GTAAAGCATAAGGTAAATGAAGCCTCTCCCCTTCATCTCTTAGTTTaGCCACTCGGCTCTCGGCGTTCTCCAGCTCCACTGTATATGCAT +
Preference number: 5 (lower is better)
Translates to: VKHKVNEASPLHLLV*PLGSRRSPAPLYMH
Trigger: ATGCATATACAGTGGAGCTGGAGAACGCCGAGAGCCGAGTGGCCAAACTAAGAGATGAAGGGGAGAGGCTTCATTTACCTTATGCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
CDS CCA 90 bp ATTTTCTTGTTCAGGGACAACCACTGCTCTTCCAGTTTTGCGATCTaGCCCTCTAATTCAGGACAGCTCACAGACGCCACCAACTGTTTG +
Preference number: 5 (lower is better)
Translates to: IFLFRDNHCSSSFAI*PSNSGQLTDATNCL
Trigger: CAAACAGTTGGTGGCGTCTGTGAGCTGTCCTGAATTAGAGGGCCAGATCGCAAAACTGGAAGAGCAGTGGTTGTCCCTGAACAAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
CDS CCA 90 bp GACCTGAGCAGATGCTTGAGAAGAGCTTGCAGCCTGTGGAGCTCATaGTCAATTTTCTTGTTCAGGGACAACCACTGCTCTTCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: DLSRCLRRACSLWSS*SIFLFRDNHCSSSF
Trigger: AAAACTGGAAGAGCAGTGGTTGTCCCTGAACAAGAAAATTGACCATGAGCTCCACAGGCTGCAAGCTCTTCTCAAGCATCTGCTCAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS CCA 90 bp AAAAAGGCTGACCTGAGCAGATGCTTGAGAAGAGCTTGCAGCCTGTaGAGCTCATGGTCAATTTTCTTGTTCAGGGACAACCACTGCTCT +
Preference number: 5 (lower is better)
Translates to: KKADLSRCLRRACSL*SSWSIFLFRDNHCS
Trigger: AGAGCAGTGGTTGTCCCTGAACAAGAAAATTGACCATGAGCTCCACAGGCTGCAAGCTCTTCTCAAGCATCTGCTCAGGTCAGCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATATCAGAGTCACGGCTaGAGAGTGATCCTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKYQSHG*RVILGG
Trigger: GCCTCCCAGGATCACTCTCAAGCCGTGACTCTGATA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTTCATTTCCTCCAATTaGTTAGGTGGTACCAATGGC +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDFISSN*LGGTNG
Trigger: GCCATTGGTACCACCTAACAAATTGGAGGAAATGAA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCTCCCAGATTTCCACTaGTCCAATGAGTTTTTCAAC +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDLPDFH*SNEFFN
Trigger: GTTGAAAAACTCATTGGACAAGTGGAAATCTGGGAG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAGTAATCCTGAATTTGTaGTTTTGCAGGTGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSVILNL*FCRWCS
Trigger: TGAACACCACCTGCAAAACAACAAATTCAGGATTAC...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGTCCTTTAATACAAAGTaGCCTGGCTCTTCTAAGCGG +
Preference number: 5 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKESFNTK*PGSSKR
Trigger: CCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGGA...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCAAGACTACTGTATTTaGGCACTGTTGATTCACGGT +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDQDYCI*ALLIHG
Trigger: ACCGTGAATCAACAGTGCCAAAATACAGTAGTCTTG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGATCCCGATCTGGGTCTaGGCTTGGTCGAGATCCTCC +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEIPIWV*AWSRSS
Trigger: GGAGGATCTCGACCAAGCCAAGACCCAGATCGGGAT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACAAGGATGTCAAATCTaGGGCTTTCTTGAGGAATTT +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSQGCQI*GFLEEF
Trigger: AAATTCCTCAAGAAAGCCCAAGATTTGACATCCTTG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCAAGGCAATCATGCTTaGGTTCCCTGCCCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCQGNHA*VPCPFF
Trigger: GAAGAACGGGCAGGGAACCAAAGCATGATTGCCTTG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGTCTCTTAAAATTTGGGCATaGAGCCGTCTGCTTTCCGGA +
Preference number: 5 (lower is better)
Translates to: FLRFLWSSWSLSSCCKESLKIWA*SRLLSG
Trigger: TCCGGAAAGCAGACGGCTCAATGCCCAAATTTTAAG...AGACTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp ACTAAGTCACTCAGATTGGTCTGGGGCCACGTGCTGGGCACCCTTGGCAATCAGAGTATTTCTTTCTCCTaGAATGAGTCATCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: TKSLRLVWGHVLGTLGNQSISFS*NESSKV
Trigger: GACCTTTGATGACTCATTCAAGGAGAAAGAAATACT...CTGATTGCCAAGGGTGCCCAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACATCATTCAAGACATTaGTGCGCAAATCAATGCTTG +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSHHSRH*CANQCL
Trigger: CAAGCATTGATTTGCGCACAAATGTCTTGAATGATG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATTTGACACCAAGGCCTaGCTCTGTTCCAAGCGCTCT +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSFDTKA*LCSKRS
Trigger: AGAGCGCTTGGAACAGAGCAAGGCCTTGGTGTCAAA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGTTATCCATCCATTCTaGAGCCTGTCCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSVIHPF*SLSWVL
Trigger: CAGGACCCAGGACAGGCTCAAGAATGGATGGATAAC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATCTTTCTACTCCTTCTaGTTCTTGCTTCAAATGCTG +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSSFYSF*FLLQML
Trigger: CAGCATTTGAAGCAAGAACAAGAAGGAGTAGAAAGA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCCTTCATCTCTTAGTTaGGCCACTCGGCTCTCGGCG +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIPSSLS*ATRLSA
Trigger: CGCCGAGAGCCGAGTGGCCAAACTAAGAGATGAAGG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCCTTCATCTCTTAGTTaGGCCACTCGGCTCTCGGCG +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRPSSLS*ATRLSA
Trigger: CGCCGAGAGCCGAGTGGCCAAACTAAGAGATGAAGG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGCCTTCGTTCAGAGTTaGGTAAAGCCGGGCGTGTTT +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCAFVQS*VKPGVF
Trigger: AAACACGCCCGGCTTTACCAAACTCTGAACGAAGGC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGACGCCACCAACTGTTaGCCTTCGTTCAGAGTTTGG +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSDATNC*PSFRVW
Trigger: CCAAACTCTGAACGAAGGCAAACAGTTGGTGGCGTC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACTGTTCTTGAGATGCAGAACTaGGTGAATGCACGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: SGFPARPLNLGTLAPVTVLEMQN*VNARSL
Trigger: AAGACTCCGTGCATTCACCAAGTTCTGCATCTCAAG...AACAGTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACTGGTCTGCAATGGCTaGGTTCACCTGAGTCCACCT +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKLVCNG*VHLSPP
Trigger: AGGTGGACTCAGGTGAACCAAGCCATTGCAGACCAG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCAGGACACTGGAATTTaGGAGAAAGGCTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDQDTGI*EKGFFC
Trigger: ACAAAAGAAGCCTTTCTCCAAAATTCCAGTGTCCTG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCTTTTCCAGTTGCATTAGTTCCCTCCGACACTCTAGGAGAGCCCGGGGGTCTGCAAACTCAAATTCATTaGCTTTCACAAGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: PFPVALVPSDTLGEPGGLQTQIH*LSQAAS
Trigger: AGATGCTGCTTGTGAAAGCAAATGAATTTGAGTTTG...CAGACCCCCGGGCTCTCCTAGAGTGTCGGAGGGAACTAATGCAACTGGAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCCAGCTGTCCTGAAGTaGACTGATTCTCCTACCCAC +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCPAVLK*TDSPTH
Trigger: GTGGGTAGGAGAATCAGTCAACTTCAGGACAGCTGG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACCAGCTGTCCTGAAGTaGACTGATTCTCCTACCCAC +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSPAVLK*TDSPTH
Trigger: GTGGGTAGGAGAATCAGTCAACTTCAGGACAGCTGG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAATACAACCCATGTATaGAGTCTGTCTTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSNTTHV*SLSSIS
Trigger: GGAGATTGAAGACAGACTCAATACATGGGTTGTATT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATGAGAAGGACACCTCTGAGGAATTaGGGCAGGCTGCCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: CTFSSASIQSSPCPLMRRTPLRN*GRLPSS
Trigger: AGAGGACGGCAGCCTGCCCAAATTCCTCAGAGGTGT...CCTTCTCATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGAGAAGTGCTCCACGTaGGTCAGCTGCAGGTCCATC +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSEKCST*VSCRSI
Trigger: GATGGACCTGCAGCTGACCAACGTGGAGCACTTCTC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTTGGAAGCCATTCAGTaGGCGCATCTTGTCATCGGC +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCLEAIQ*AHLVIG
Trigger: GCCGATGACAAGATGCGCCAACTGAATGGCTTCCAA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACCTGTCACCTTCCATTaGCTTGTAGTGATGCTCGGG +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSPVTFH*LVVMLG
Trigger: CCCGAGCATCACTACAAGCAAATGGAAGGTGACAGG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCCTGTCACCTTCCATTaGCTTGTAGTGATGCTCGGG +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCPVTFH*LVVMLG
Trigger: CCCGAGCATCACTACAAGCAAATGGAAGGTGACAGG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTTCGGGGCTCTCGGTTaGCAGAAATTCCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCFGALG*QKFLAA
Trigger: AGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGAA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGAGCTGGCACGGATGTaGCAGGAGGCTGGTCCCCCG +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNELARM*QEAGPP
Trigger: CGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GTAATTTCCTGTTGGAAGCCATTCAGTTGGCGCATCTTGTCATCGGCGTCACTCGGGGTCTCTGGAGTCTaGTCCTTTGATGATGATAGT +
Preference number: 5 (lower is better)
Translates to: VISCWKPFSWRILSSASLGVSGV*SFDDDS
Trigger: ACTATCATCATCAAAGGACAAGACTCCAGAGACCCC...GAGTGACGCCGATGACAAGATGCGCCAACTGAATGGCTTCCAACAGGAAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS GCA 90 bp GCCCCAGGAACCCTGTTCATCTTCGGTGGGAAGCTCAGGACTAGATaGCATTCTTTGACTCAATGGAGATTATATCATGTCCATCTCAGT +
Preference number: 5 (lower is better)
Translates to: APGTLFIFGGKLRTR*HSLTQWRLYHVHLS
Trigger: ACTGAGATGGACATGATATAATCTCCATTGAGTCAAAGAATGGCATCTAGTCCTGAGCTTCCCACCGAAGATGAACAGGGTTCCTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS GCA 90 bp TGTTCTAAATGTTGTATCTTTCTATTCAGCATTCCATGTACACGGTaGCACTGGCGGTTCATCTCCCCCAGGTGCTCTGCAAACTCCGTT +
Preference number: 5 (lower is better)
Translates to: CSKCCIFLFSIPCTR*HWRFISPRCSANSV
Trigger: AACGGAGTTTGCAGAGCACCTGGGGGAGATGAACCGCCAGTGGCACCGTGTACATGGAATGCTGAATAGAAAGATACAACATTTAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CCA 90 bp TCACTGTTTTCAGTTTCAGGGAAAGCGCTTCAGCCTCATGTTGAGTaGCTCCATTATCTCCCAGGCCCTGATCTTTGCAAGTCTCTAACA +
Preference number: 5 (lower is better)
Translates to: SLFSVSGKALQPHVE*LHYLPGPDLCKSLT
Trigger: TGTTAGAGACTTGCAAAGATCAGGGCCTGGGAGATAATGGAGCCACTCAACATGAGGCTGAAGCGCTTTCCCTGAAACTGAAAACAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553455.1
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
ENST00000673869.1
CDS CCA 90 bp TCTTCTGGATCTCTTGATCATCGCAGACATCATAAACAACAGGCTTaGAAAGCTCAGACTCAATTCGAGCCAACCAGGTGCGAAGGTTGC +
Preference number: 5 (lower is better)
Translates to: SSGSLDHRRHHKQQA*KAQTQFEPTRCEGC
Trigger: GCAACCTTCGCACCTGGTTGGCTCGAATTGAGTCTGAGCTTTCCAAGCCTGTTGTTTATGATGTCTGCGATGATCAAGAGATCCAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555241.5
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACTCATAGGTGGCGCATaGTTCCTGAGCCCACAAAAG +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKLIGGA*FLSPQK
Trigger: CTTTTGTGGGCTCAGGAACAATGCGCCACCTATGAG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGTCCCAGGGGCATCTTaGGAATACTGCAGAAACTGT +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCVPGAS*EYCRNC
Trigger: ACAGTTTCTGCAGTATTCCAAAGATGCCCCTGGGAC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATGTCCCAGGGGCATCTTaGGAATACTGCAGAAACTGT +
Preference number: 5 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYVPGAS*EYCRNC
Trigger: ACAGTTTCTGCAGTATTCCAAAGATGCCCCTGGGAC...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCTATCAGAGTCACGGCTaGAGAGTGATCCTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCYQSHG*RVILGG
Trigger: GCCTCCCAGGATCACTCTCAAGCCGTGACTCTGATA...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTATCCATCAGGCTCTaGAATAAAGTCATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSLSIRL*NKVIFS
Trigger: AGAGAAAATGACTTTATTCAAGAGCCTGATGGATAG...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGCTCCCAGATTTCCACTaGTCCAATGAGTTTTTCAAC +
Preference number: 5 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKELPDFH*SNEFFN
Trigger: GTTGAAAAACTCATTGGACAAGTGGAAATCTGGGAG...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCAAGGTATTTCACTGCTTaGGAGCAAAAACTGTATTTC +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSRYFTA*EQKLYF
Trigger: GAAATACAGTTTTTGCTCCAAAGCAGTGAAATACCT...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACTGAGTGCATGGCAGTaGGATTCTCCTGTTAAGCAC +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLSAWQ*DSPVKH
Trigger: GTGCTTAACAGGAGAATCCAACTGCCATGCACTCAG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTATCCCGATCTGGGTCTaGGCTTGGTCGAGATCCTCC +
Preference number: 5 (lower is better)
Translates to: SSHASVRCPPALFYCFFLIPIWV*AWSRSS
Trigger: GGAGGATCTCGACCAAGCCAAGACCCAGATCGGGAT...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGTGTTGTCCCACTGGTaGCTGATGTCAGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIVLSHW*LMSVRV
Trigger: GACCCTCACTGACATCAGCAACCAGTGGGACAACAC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGTGACCGTCCAAGTTTaGCACAGAATCCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCVTVQV*HRILQL
Trigger: CAACTGCAGGATTCTGTGCAAAACTTGGACGGTCAC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGTCTCTAGGAACCTTATCTTaGACCTCTTCAGCCAACGAT +
Preference number: 5 (lower is better)
Translates to: FLRFLWSSWSLSSCCKESLGTLS*TSSAND
Trigger: ATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAG...AGACTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGGCTCCTGAAGATGTGTaGAGATTCCACTGTCAATTT +
Preference number: 5 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKEAPEDV*RFHCQF
Trigger: AAATTGACAGTGGAATCTCAACACATCTTCAGGAGC...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATTTGACACCAAGGCCTaGCTCTGTTCCAAGCGCTCT +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKFDTKA*LCSKRS
Trigger: AGAGCGCTTGGAACAGAGCAAGGCCTTGGTGTCAAA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGTCTAGAGCCGACACAATCTaGAGCAAACATATGCCATCA +
Preference number: 5 (lower is better)
Translates to: FLRFLWSSWSLSSCCKESRADTI*SKHMPS
Trigger: TGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCT...AGACTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTCCAGCTCATTTAGTTaGGAATGCCATAGATCTAAC +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDSSSFS*ECHRSN
Trigger: GTTAGATCTATGGCATTCCAAACTAAATGAGCTGGA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAGGTTTCATTCCTGTTaGGGGCAACCTCAGTTCCAC +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCRFHSC*GQPQFH
Trigger: GTGGAACTGAGGTTGCCCCAAACAGGAATGAAACCT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCGCTTCAGCCTCATGTaGAGTGGCTCCATTATCTCC +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLRFSLM*SGSIIS
Trigger: GGAGATAATGGAGCCACTCAACATGAGGCTGAAGCG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCATTCAAGGAGCAAGTaGGTGTTCTCGCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLHSRSK*VFSPGQ
Trigger: TTGGCCTGGCGAGAACACCAACTTGCTCCTTGAATG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACAGTTCCACCATGCCTaGCAACAAAGCATCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSQFHHA*QQSILL
Trigger: CAGCAAGATGCTTTGTTGCAAGGCATGGTGGAACTG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGTAAGCCCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCATTTAACTTCTGTTACTaGTTCTGCCCAAAATGTCTC +
Preference number: 5 (lower is better)
Translates to: GKPRRSLHRSRDLANTKSFNFCY*FCPKCL
Trigger: GAGACATTTTGGGCAGAACAAGTAACAGAAGTTAAA...TGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGGGCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGCCTTCGTTCAGAGTTaGGTAAAGCCGGGCGTGTTT +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLAFVQS*VKPGVF
Trigger: AAACACGCCCGGCTTTACCAAACTCTGAACGAAGGC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCATGCTTGAGAAGAGCTaGCAGCCTGTGGAGCTCATG +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLMLEKS*QPVELM
Trigger: CATGAGCTCCACAGGCTGCAAGCTCTTCTCAAGCAT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTTCTGGGTTCCCTGCAAGGCCATTAAATCTTGGGACACTTGCTCCCGTAACTGTGCTTCCAGCCAGTaGTTCAAGATCTGTATTTTA +
Preference number: 5 (lower is better)
Translates to: GFWVPCKAIKSWDTCSRNCASSQ*FKICIL
Trigger: TAAAATACAGATCTTGAACAACTGGCTGGAAGCACA...GTTACGGGAGCAAGTGTCCCAAGATTTAATGGCCTTGCAGGGAACCCAGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATTTAATTTTGTTGAGCTaGTCATCGATCTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDLILLS*SSISAA
Trigger: AGCAGCTGAGATCGATGACAAGCTCAACAAAATTAA...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ACTGAGGAGATGACGGTTCCTCGCTCTCTCCCCGTTTACGCCAAGAATCAGTCTTTAATTTTGTTGAGCTaGTCATCGATCTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: TEEMTVPRSLPVYAKNQSLILLS*SSISAA
Trigger: AGCAGCTGAGATCGATGACAAGCTCAACAAAATTAA...AGACTGATTCTTGGCGTAAACGGGGAGAGAGCGAGGAACCGTCATCTCCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGAAGTGCTCCACGTaGGTCAGCTGCAGGTCCATC +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPEKCST*VSCRSI
Trigger: GATGGACCTGCAGCTGACCAACGTGGAGCACTTCTC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGTCCATTGCTGTAGCTTaGGTTAGTTGCATTCTCCTT +
Preference number: 5 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKESIAVA*VSCILL
Trigger: AAGGAGAATGCAACTAACCAAAGCTACAGCAATGGA...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS TCA 90 bp TTTGAAATGAGTTCACCGGGGCTCTCTCTTTGCCCCAGTAACTGCTaGGCCCTCATCATATATGATTCAAGTTCCTTCTGGGATTCTTCC +
Preference number: 5 (lower is better)
Translates to: FEMSSPGLSLCPSNC*ALIIYDSSSFWDSS
Trigger: GGAAGAATCCCAGAAGGAACTTGAATCATATATGATGAGGGCTCAGCAGTTACTGGGGCAAAGAGAGAGCCCCGGTGAACTCATTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS GCA 90 bp ATAGGTGGCGCATTGTTCCTGAGCCCACAAAAGAAGGGCCTTTCTTaGAGACATTTGCCATCTTGCTTGCACTTTAGAGCATTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: IGGALFLSPQKKGLS*RHLPSCLHFRAFLS
Trigger: GCTAAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAATGTCTGCAAGAAAGGCCCTTCTTTTGTGGGCTCAGGAACAATGCGCCACCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS GCA 90 bp TGTTTACGTATGGCCACCCTTAAGCAGAGGTCCTCCCATTGTCTGTaGAAATGCTCTATTTGCTCCTTCAAAACCATCACATCTTCCACG +
Preference number: 5 (lower is better)
Translates to: CLRMATLKQRSSHCL*KCSICSFKTITSST
Trigger: CGTGGAAGATGTGATGGTTTTGAAGGAGCAAATAGAGCATTTGCACAGACAATGGGAGGACCTCTGCTTAAGGGTGGCCATACGTAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 90 bp AAGATTTTAGGGTACCACAGGCCTTTCATACGCCCCCGTGAACTCTaGCTTTCATTTCAGGATATCCTCCACTACGTTCCAACCAGAAAT +
Preference number: 5 (lower is better)
Translates to: KILGYHRPFIRPREL*LSFQDILHYVPTRN
Trigger: ATTTCTGGTTGGAACGTAGTGGAGGATATCCTGAAATGAAAGGCAGAGTTCACGGGGGCGTATGAAAGGCCTGTGGTACCCTAAAATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557005.1
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCTCATAGGTGGCGCATaGTTCCTGAGCCCACAAAAG +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRLIGGA*FLSPQK
Trigger: CTTTTGTGGGCTCAGGAACAATGCGCCACCTATGAG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATATCAGAGTCACGGCTaGAGAGTGATCCTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPYQSHG*RVILGG
Trigger: GCCTCCCAGGATCACTCTCAAGCCGTGACTCTGATA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATATCAGAGTCACGGCTaGAGAGTGATCCTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKYQSHG*RVILGG
Trigger: GCCTCCCAGGATCACTCTCAAGCCGTGACTCTGATA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CACTTCCTCAGGTTTCTATGGTCATCCTGGAGTCTCAGTAGCTGCTGCAAGGAGGTAATCCTGAATTTGTaGTTTTGCAGGTGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: HFLRFLWSSWSLSSCCKEVILNL*FCRWCS
Trigger: TGAACACCACCTGCAAAACAACAAATTCAGGATTAC...CTCCTTGCAGCAGCTACTGAGACTCCAGGATGACCATAGAAACCTGAGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGAGTCTTCAAGCTCCTTaGCTCGAGCCTGGCATATGG +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESLQAP*LEPGIW
Trigger: CCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTAGTCTTCAAGCTCCTTaGCTCGAGCCTGGCATATGG +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKISLQAP*LEPGIW
Trigger: CCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACT...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGTGTTGTCCCACTGGTaGCTGATGTCAGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGVLSHW*LMSVRV
Trigger: GACCCTCACTGACATCAGCAACCAGTGGGACAACAC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTGTGTTGTCCCACTGGTaGCTGATGTCAGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFVLSHW*LMSVRV
Trigger: GACCCTCACTGACATCAGCAACCAGTGGGACAACAC...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACGTGACCGTCCAAGTTTaGCACAGAATCCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHVTVQV*HRILQL
Trigger: CAACTGCAGGATTCTGTGCAAAACTTGGACGGTCAC...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAATCCACAGCTGAATCCTaGTTTATTTCCCAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LPWQLSPPWELSVFHFLESTAES*FISQSS
Trigger: GGAAGACTGGGAAATAAACAAGGATTCAGCTGTGGA...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGCCGAATATCCTATATaGTGGAGAACCAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKAEYPI*WRTKAP
Trigger: TGGGGCCTTGGTTCTCCACAATATAGGATATTCGGC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACGCCGAATATCCTATATaGTGGAGAACCAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHAEYPI*WRTKAP
Trigger: TGGGGCCTTGGTTCTCCACAATATAGGATATTCGGC...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCATGTTGCTGCTGCTGTaGCAGAGAAATCTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCMLLLL*QRNLSV
Trigger: GACACTGAGATTTCTCTGCAACAGCAGCAGCAACAT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCAAGGCAATCATGCTTaGGTTCCCTGCCCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIQGNHA*VPCPFF
Trigger: GAAGAACGGGCAGGGAACCAAAGCATGATTGCCTTG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCAAGGCAATCATGCTTaGGTTCCCTGCCCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSQGNHA*VPCPFF
Trigger: GAAGAACGGGCAGGGAACCAAAGCATGATTGCCTTG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCGCTCCTCATAGATGTTaGTTAGCTCCTGAAGATGTG +
Preference number: 5 (lower is better)
Translates to: CKTVATRTWTVQELSPFCAPHRC*LAPEDV
Trigger: CACATCTTCAGGAGCTAACAAACATCTATGAGGAGC...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTTTGACACCAAGGCCTaGCTCTGTTCCAAGCGCTCT +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSFDTKA*LCSKRS
Trigger: AGAGCGCTTGGAACAGAGCAAGGCCTTGGTGTCAAA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATTTTGACACCAAGGCCTaGCTCTGTTCCAAGCGCTCT +
Preference number: 5 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYFDTKA*LCSKRS
Trigger: AGAGCGCTTGGAACAGAGCAAGGCCTTGGTGTCAAA...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTGTAGTTGTGGCAGCTaGTCAGCTTGGTCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRCSCGS*SAWSGD
Trigger: GTCACCAGACCAAGCTGACAAGCTGCCACAACTACA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCGCTTCAGCCTCATGTaGAGTGGCTCCATTATCTCC +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSRFSLM*SGSIIS
Trigger: GGAGATAATGGAGCCACTCAACATGAGGCTGAAGCG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAAGGTTACTTGCTTCTaGGCGCAGGTCTTCAAGTTG +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCKVTCF*AQVFKL
Trigger: CAACTTGAAGACCTGCGCCAAGAAGCAAGTAACCTT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGTGTCTGAAGGTTACTaGCTTCTTGGCGCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLVSEGY*LLGAGL
Trigger: AAGACCTGCGCCAAGAAGCAAGTAACCTTCAGACAC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCCAGCTTTCAGGGACTaGCTTCTACAGACAGCTGCA +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEPAFRD*LLQTAA
Trigger: TGCAGCTGTCTGTAGAAGCAAGTCCCTGAAAGCTGG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTATGCTTGAGAAGAGCTaGCAGCCTGTGGAGCTCATG +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIMLEKS*QPVELM
Trigger: CATGAGCTCCACAGGCTGCAAGCTCTTCTCAAGCAT...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATAGTACCAGAATCGGATaGTCATCATATTCACTTCAT +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDSTRIG*SSYSLH
Trigger: ATGAAGTGAATATGATGACAATCCGATTCTGGTACT...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCGAGCTGTTGAAACTTaGCTTCCTGCTGCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRRAVET*LPAASA
Trigger: GGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTCG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGATGTTTGCGAGCTGTaGAAACTTTGCTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCDVCEL*KLCFLL
Trigger: CAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACATC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CCAGAAGAAGTCTGCACAGGTCCCGGGACCTTGCCAACACTAAGTCACTCAGATCAAACTCAAATTCATTaGCTTTCACAAGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: PEEVCTGPGTLPTLSHSDQTQIH*LSQAAS
Trigger: AGATGCTGCTTGTGAAAGCAAATGAATTTGAGTTTG...ATCTGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGTGCAGACTTCTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACACACTCGGTCTCATTaGCACAGGCATCGGAGTCGT +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKHTRSH*HRHRSR
Trigger: ACGACTCCGATGCCTGTGCAAATGAGACCGAGTGTG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTTGTCCCAGCGCTGGTaGCCCTCGTGGACCATCTGC +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNLSQRW*PSWTIC
Trigger: GCAGATGGTCCACGAGGGCAACCAGCGCTGGGACAA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTTGGAAGCCATTCAGTaGGCGCATCTTGTCATCGGC +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRLEAIQ*AHLVIG
Trigger: GCCGATGACAAGATGCGCCAACTGAATGGCTTCCAA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTTGGAAGCCATTCAGTaGGCGCATCTTGTCATCGGC +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKILEAIQ*AHLVIG
Trigger: GCCGATGACAAGATGCGCCAACTGAATGGCTTCCAA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTCCTTGCTGCTCACGTaGACAGAGACCACTAATGCC +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKISLLLT*TETTNA
Trigger: GGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGGA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCATGTCCACTTGAGGTaGACGTTCTACCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLHVHLR*TFYQLL
Trigger: AAGGAGCTGGTAGAACGTCAACCTCAAGTGGACATG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACATGTCCACTTGAGGTaGACGTTCTACCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKHVHLR*TFYQLL
Trigger: AAGGAGCTGGTAGAACGTCAACCTCAAGTGGACATG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACACGTGCTGGGCACCCTaGGCAATCAGGCAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNTCWAP*AIRQVV
Trigger: CACCACCTGCCTGATTGCCAAGGGTGCCCAGCACGT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAACTAAGTCACTCAGATaGGTCTGGGGCCACGTGCTG +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPTKSLR*VWGHVL
Trigger: CAGCACGTGGCCCCAGACCAATCTGAGTGACTTAGT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAACAGGTCCCGGGACCTaGCCAACACTAAGTCACTCA +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPTGPGT*PTLSHS
Trigger: TGAGTGACTTAGTGTTGGCAAGGTCCCGGGACCTGT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAACCGGCAGCTCAAAATaGCCAGCTGATTGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSTGSSK*PADWSK
Trigger: TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAGCCAACTGATAAGCTCCTTCACATGTGCTTTGGGCAGATGCTTCTTCACATGCCAGAAGAACTAGCATaGTGGATTCTATACCAGTGG +
Preference number: 5 (lower is better)
Translates to: EPTDKLLHMCFGQMLLHMPEELA*WILYQW
Trigger: CCACTGGTATAGAATCCACAATGCTAGTTCTTCTGG...CATGTGAAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTTATCAGTTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS TCA 90 bp TGTGCTAAAGAAGCTCTCAGTGTAGCTGTATCAGTTTCTTTCAGGTaGAGAAGCTGGTTCCCGATACTGATAACGGCAGTCTTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: CAKEALSVAVSVSFR*RSWFPILITAVFKE
Trigger: CTCCTTGAAGACTGCCGTTATCAGTATCGGGAACCAGCTTCTTCACCTGAAAGAAACTGATACAGCTACACTGAGAGCTTCTTTAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
CDS TCA 90 bp CTGCCGAACACCCTGGACAGCATTCTGCCACCGATCCGTCAGCTTTaGGAATTCTGTAATAAATTCTGGTCTGTTCTCTATTTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: LPNTLDSILPPIRQL*EFCNKFWSVLYFCC
Trigger: ACAACAGAAATAGAGAACAGACCAGAATTTATTACAGAATTCTCAAAGCTGACGGATCGGTGGCAGAATGCTGTCCAGGGTGTTCGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS TCA 90 bp CGTATGGCCACCTTAATCAGCTCTTTTTCGTTATGGAGGTCCTCGTaGAGCTCTGGAAGAGGATCTTCACTTTGTGCCTTTAAAACTTGC +
Preference number: 5 (lower is better)
Translates to: RMATLISSFSLWRSS*SSGRGSSLCAFKTC
Trigger: GCAAGTTTTAAAGGCACAAAGTGAAGATCCTCTTCCAGAGCTTCACGAGGACCTCCATAACGAAAAAGAGCTGATTAAGGTGGCCATACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS TCA 90 bp ACCATGTCCCAGCGACACACTCTAGGACAAGAGGTCTGCTCTGTGTaGGAGTGGAGCTATTTAACCATCTATAAAATGAGCCCAAAAAGT +
Preference number: 5 (lower is better)
Translates to: TMSQRHTLGQEVCSV*EWSYLTIYKMSPKS
Trigger: ACTTTTTGGGCTCATTTTATAGATGGTTAAATAGCTCCACTCTCACACAGAGCAGACCTCTTGTCCTAGAGTGTGTCGCTGGGACATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557060.1
CDS CCA 90 bp CTCCTTCTTGTTCTTGCTTCAAATGCTGGTGAAGGTTTAGTACGGTaGCCTTCAAGTCCACCAACAGGTCTTCTTTTCTCTGGTTCAAAC +
Preference number: 5 (lower is better)
Translates to: LLLVLASNAGEGLVR*PSSPPTGLLFSGSN
Trigger: GTTTGAACCAGAGAAAAGAAGACCTGTTGGTGGACTTGAAGGCCACCGTACTAAACCTTCACCAGCATTTGAAGCAAGAACAAGAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000557060.1
CDS CCA 90 bp GTGTCTGAAGGTTACTTGCTTCTTGGCGCAGGTCTTCAAGTTGGGTaGTATAGGTTTTCAGTTCTTCAGTTGTTGGGTATCTTGCAGATG +
Preference number: 5 (lower is better)
Translates to: VSEGYLLLGAGLQVG*YRFSVLQLLGILQM
Trigger: CATCTGCAAGATACCCAACAACTGAAGAACTGAAAACCTATACCACCCAACTTGAAGACCTGCGCCAAGAAGCAAGTAACCTTCAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS-3UTR CAA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATACTCATAGGTGGCGCATaGTTCCTGAGCCCACAAAAG +
Preference number: 5 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWILIGGA*FLSPQK
Trigger: CTTTTGTGGGCTCAGGAACAATGCGCCACCTATGAG...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCCTCAGATTGTCTTTGTaGGATCTATGCTTCACACTC +
Preference number: 5 (lower is better)
Translates to: CKTVATRTWTVQELSPFCLRLSL*DLCFTL
Trigger: GAGTGTGAAGCATAGATCCAACAAAGACAATCTGAG...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTCAGGCCTCATGTTCTTaGATGAGACCCTTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCQASCS*MRPLVL
Trigger: AAGGACCAAGGGTCTCATCAAAGAACATGAGGCCTG...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCCTGAGTGCATGGCAGTaGGATTCTCCTGTTAAGCAC +
Preference number: 5 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSLSAWQ*DSPVKH
Trigger: GTGCTTAACAGGAGAATCCAACTGCCATGCACTCAG...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAGTCTTCAAGCTCCTTaGCTCGAGCCTGGCATATGG +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSLQAP*LEPGIW
Trigger: CCATATGCCAGGCTCGAGCAAAGGAGCTTGAAGACT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACACAGAATCCTGCAGTaGTTGAAGAAGACTTTCGTG +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSHRILQ*LKKTFV
Trigger: CACGAAAGTCTTCTTCAACAACTGCAGGATTCTGTG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTTCCTCAACCGCTATTaGATCCACAGGCTTATCAGA +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCFLNRY*IHRLIR
Trigger: TCTGATAAGCCTGTGGATCAAATAGCGGTTGAGGAA...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCATGTTGCTGCTGCTGTaGCAGAGAAATCTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLMLLLL*QRNLSV
Trigger: GACACTGAGATTTCTCTGCAACAGCAGCAGCAACAT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAGAGCCGACACAATCTaGAGCAAACATATGCCATCA +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCRADTI*SKHMPS
Trigger: TGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGTGGTGGCTGCCTCTTTaGTTTTGGAAATTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: SREFSCSERRQKVFQSFEWWLPL*FWKFQG
Trigger: TCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCA...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTAGGTTTCATTCCTGTTaGGGGCAACCTCAGTTCCAC +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIRFHSC*GQPQFH
Trigger: GTGGAACTGAGGTTGCCCCAAACAGGAATGAAACCT...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCTTGTAAAAGCTGATTaGTCCGCTGAAACACAGGCA +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCLVKAD*SAETQA
Trigger: TGCCTGTGTTTCAGCGGACAAATCAGCTTTTACAAG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTGCCACGTTGGCTTGTaGCAGCCACAGCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNCHVGL*QPQLQL
Trigger: GAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAACAGAAAGGCAACCTaGTGCTCAATCTCTGTTAGC +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCNRKAT*CSISVS
Trigger: GCTAACAGAGATTGAGCACAAGGTTGCCTTTCTGTT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATGTATCGTTATCATGTaGGCAATACTGGGGCCACAT +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSCIVIM*AILGPH
Trigger: ATGTGGCCCCAGTATTGCCAACATGATAACGATACA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTGGATGCCTGGTTGCTaGCAGATGATTCCTGAGTTG +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSWMPGC*QMIPEL
Trigger: CAACTCAGGAATCATCTGCAAGCAACCAGGCATCCA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGTGTCTGAAGGTTACTaGCTTCTTGGCGCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRVSEGY*LLGAGL
Trigger: AAGACCTGCGCCAAGAAGCAAGTAACCTTCAGACAC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGTGTCTGAAGGTTACTaGCTTCTTGGCGCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSVSEGY*LLGAGL
Trigger: AAGACCTGCGCCAAGAAGCAAGTAACCTTCAGACAC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACATTCAAGGAGCAAGTaGGTGTTCTCGCCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPHSRSK*VFSPGQ
Trigger: TTGGCCTGGCGAGAACACCAACTTGCTCCTTGAATG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGACGCCACCAACTGTTaGCCTTCGTTCAGAGTTTGG +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGDATNC*PSFRVW
Trigger: CCAAACTCTGAACGAAGGCAAACAGTTGGTGGCGTC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCTTGAGATGCAGAACTaGGTGAATGCACGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLLEMQN*VNARSL
Trigger: AAGACTCCGTGCATTCACCAAGTTCTGCATCTCAAG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATTTCAGTCTCTCTTCTaGTGCTTCCAGCCAGTTGTT +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSFQSLF*CFQPVV
Trigger: AACAACTGGCTGGAAGCACAAGAAGAGAGACTGAAA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGATAACACCACAGGCTaGCTGTGTTCCATGCAGTAC +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEDNTTG*LCSMQY
Trigger: GTACTGCATGGAACACAGCAAGCCTGTGGTGTTATC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCAGAGACCTTTGAGTTaGCCGATAACCTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRQRPLS*PITSWS
Trigger: ACTCCAGGAGGTTATCGGCAAACTCAAAGGTCTCTG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGATGTTTGCGAGCTGTaGAAACTTTGCTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKDVCEL*KLCFLL
Trigger: CAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACATC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAGAAGTAGTGAAATCTaGCCACTGCCTCACCAGCCC +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGRSSEI*PLPHQP
Trigger: GGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTCT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGATCAGACTTCTGGTTaGGTAGAGGCTGAAGCGCTC +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPDQTSG*VEAEAL
Trigger: GAGCGCTTCAGCCTCTACCAAACCAGAAGTCTGATC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGCAGAGGTCCTCCCATaGTCTGTGCAAATGCTCTAT +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRAEVLP*SVQMLY
Trigger: ATAGAGCATTTGCACAGACAATGGGAGGACCTCTGC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATGAGAAGGGCAGAGGTCCTCCCATaGTCTGTGCAAATGCTCTAT +
Preference number: 5 (lower is better)
Translates to: CTFSSASIQSSPCPLMRRAEVLP*SVQMLY
Trigger: ATAGAGCATTTGCACAGACAATGGGAGGACCTCTGC...CCTTCTCATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCAGAGGTCCTCCCATaGTCTGTGCAAATGCTCTAT +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIAEVLP*SVQMLY
Trigger: ATAGAGCATTTGCACAGACAATGGGAGGACCTCTGC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGCTGTCTGTAGAACTTaGTTTTCCATCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLAVCRT*FSICTS
Trigger: GCTGGTGCAGATGGAAAACAAAGTTCTACAGACAGC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGATTTGTTGCTGGCCTaGATCAACTGGTCACCCATC +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEDLLLA*INWSPI
Trigger: GATGGGTGACCAGTTGATCAAGGCCAGCAACAAATC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGATTTGTTGCTGGCCTaGATCAACTGGTCACCCATC +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIDLLLA*INWSPI
Trigger: GATGGGTGACCAGTTGATCAAGGCCAGCAACAAATC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCTCTTCAGTTCCTCTTaGGCACTCGTGTACAACACC +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRLFSSS*ALVYNT
Trigger: GGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGAG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AATAACATGCACCTTTTCTTCAGCTTCAATACAGTCTTCTCCATGTCCCTTAATGAGAAGTGCTCCACGTaGGTCAGCTGCAGGTCCATC +
Preference number: 5 (lower is better)
Translates to: NNMHLFFSFNTVFSMSLNEKCST*VSCRSI
Trigger: GATGGACCTGCAGCTGACCAACGTGGAGCACTTCTC...ATTAAGGGACATGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCATGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553289.5
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATTGGAAGCCATTCAGTaGGCGCATCTTGTCATCGGC +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKLEAIQ*AHLVIG
Trigger: GCCGATGACAAGATGCGCCAACTGAATGGCTTCCAA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACCTGTCACCTTCCATTaGCTTGTAGTGATGCTCGGG +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGPVTFH*LVVMLG
Trigger: CCCGAGCATCACTACAAGCAAATGGAAGGTGACAGG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCTTCCTGCTGTGGGTaGCCATTCAGGACTCGCGGG +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSSCCG*PFRTRG
Trigger: CCCGCGAGTCCTGAATGGCAACCCACAGCAGGAAGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCCTTGCTGCTCACGTaGACAGAGACCACTAATGCC +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSLLLT*TETTNA
Trigger: GGCATTAGTGGTCTCTGTCAACGTGAGCAGCAAGGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATTCGGGGCTCTCGGTTaGCAGAAATTCCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPFGALG*QKFLAA
Trigger: AGCAGCAAGGAATTTCTGCAAACCGAGAGCCCCGAA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCCACAGCAGCAGATTTaGACTCAACTGGTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSPQQQI*TQLVEV
Trigger: GACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTGG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCATGTCCACTTGAGGTaGACGTTCTACCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIHVHLR*TFYQLL
Trigger: AAGGAGCTGGTAGAACGTCAACCTCAAGTGGACATG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCATGTCCACTTGAGGTaGACGTTCTACCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRHVHLR*TFYQLL
Trigger: AAGGAGCTGGTAGAACGTCAACCTCAAGTGGACATG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGAATTCACAAAGTGCTaGGCTCTTCAGGAAACTGAC +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCEFTKC*ALQETD
Trigger: GTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS TCA 90 bp TTAGGGAACATTCTGGGCCTTGCTCAGTGTTTAGTGAGTCTGGTGTaGGGATTTGTGCCATGGAATTATCAGAGGTGCTTATTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: LGNILGLAQCLVSLV*GFVPWNYQRCLFSH
Trigger: ATGGGAAAATAAGCACCTCTGATAATTCCATGGCACAAATCCTCACACCAGACTCACTAAACACTGAGCAAGGCCCAGAATGTTCCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553308.1
ENST00000554584.5
ENST00000555002.6
CDS TCA 90 bp CATGCATGTTTGCAAAATGTCAGTATGTCCCAGAAGAGAATGAGATaGGTCATGCAACTCAGCAACACTGTGCCTTCACTAGATGGGTAC +
Preference number: 5 (lower is better)
Translates to: HACLQNVSMSQKRMR*VMQLSNTVPSLDGY
Trigger: GTACCCATCTAGTGAAGGCACAGTGTTGCTGAGTTGCATGACTCATCTCATTCTCTTCTGGGACATACTGACATTTTGCAAACATGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS GCA 90 bp ATGAGTCAACCACACTCACATCATCCAGGGAAGGCTGATTGTAATTaGAAGAAAGAGTCTGGGCAAGCTTCTCAATATGAAAGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: MSQPHSHHPGKADCN*KKESGQASQYESAG
Trigger: TCCTGCACTTTCATATTGAGAAGCTTGCCCAGACTCTTTCTTGCAATTACAATCAGCCTTCCCTGGATGATGTGAGTGTGGTTGACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS GCA 90 bp AAACAACAGGCTTGGAAAGCTCAGACTCAATTCGAGCCAACCAGGTaGGAAGGTTGCTCATGTTTTTGTCCAACTGTGTTGATGAGAAAA +
Preference number: 5 (lower is better)
Translates to: KQQAWKAQTQFEPTR*EGCSCFCPTVLMRK
Trigger: TTTTCTCATCAACACAGTTGGACAAAAACATGAGCAACCTTCGCACCTGGTTGGCTCGAATTGAGTCTGAGCTTTCCAAGCCTGTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555241.5
CDS CCA 90 bp TTTAGTACGGTGGCCTTCAAGTCCACCAACAGGTCTTCTTTTCTCTaGTTCAAACTCAGAATCTGTTTCTCCATACGTTCGATTTCTCCC +
Preference number: 5 (lower is better)
Translates to: FSTVAFKSTNRSSFL*FKLRICFSIRSISP
Trigger: GGGAGAAATCGAACGTATGGAGAAACAGATTCTGAGTTTGAACCAGAGAAAAGAAGACCTGTTGGTGGACTTGAAGGCCACCGTACTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000557060.1
CDS-3UTR CAA 90 bp GAGCCAACTGATAAGCTCCTTCACATGTGCTTTGGGCAGATGCTTCTTCACATGCATTTGCCATCTTGCTaGCACTTTAGAGCATTTCTT +
Preference number: 5 (lower is better)
Translates to: EPTDKLLHMCFGQMLLHMHLPSC*HFRAFL
Trigger: AAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAATG...CATGTGAAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTTATCAGTTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTAAAGAAGGGCCTTTCTaGCAGACATTTGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: RMLLRQHSISCLADASLFKEGPF*QTFAIL
Trigger: CAAGATGGCAAATGTCTGCAAGAAAGGCCCTTCTTT...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCTCAGATTGTCTTTGTaGGATCTATGCTTCACACTC +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCLRLSL*DLCFTL
Trigger: GAGTGTGAAGCATAGATCCAACAAAGACAATCTGAG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAATCTCTCAGATTGTCTTaGTTGGATCTATGCTTCACA +
Preference number: 5 (lower is better)
Translates to: LPWQLSPPWELSVFHFLESLRLS*LDLCFT
Trigger: TGTGAAGCATAGATCCAACAAAGACAATCTGAGAGA...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAAGGCCTCTCTCAGATaGTCTTTGTTGGATCTATGC +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKKASLR*SLLDLC
Trigger: GCATAGATCCAACAAAGACAATCTGAGAGAGGCCTT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTCTTTGATGAGACCCTaGGTCCTTCCTCTACGGATA +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKISLMRP*VLPLRI
Trigger: TATCCGTAGAGGAAGGACCAAGGGTCTCATCAAAGA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCTCTTTGATGAGACCCTaGGTCCTTCCTCTACGGATA +
Preference number: 5 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSSLMRP*VLPLRI
Trigger: TATCCGTAGAGGAAGGACCAAGGGTCTCATCAAAGA...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGCTGATTATCTGATTTaGCAAATGGTGCCTCACTGT +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCADYLI*QMVPHC
Trigger: ACAGTGAGGCACCATTTGCAAAATCAGATAATCAGC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATGCTGATTATCTGATTTaGCAAATGGTGCCTCACTGT +
Preference number: 5 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYADYLI*QMVPHC
Trigger: ACAGTGAGGCACCATTTGCAAAATCAGATAATCAGC...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAAGAAGTAATCCTGAATTaGTTGTTTTGCAGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: LPWQLSPPWELSVFHFLEEVILN*LFCRWC
Trigger: ACACCACCTGCAAAACAACAAATTCAGGATTACTTC...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCCTTTAATACAAAGTaGCCTGGCTCTTCTAAGCGG +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSFNTK*PGSSKR
Trigger: CCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAACAAGCCTCTAGTAATTaGTTTTCCTCAGTGAATTCC +
Preference number: 5 (lower is better)
Translates to: LPWQLSPPWELSVFHFLEQASSN*FSSVNS
Trigger: GGAATTCACTGAGGAAAACAAATTACTAGAGGCTTG...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCGGTGACCAAGGCTTaGGTATTCTCCCACAAGACT +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSVTKA*VFSHKT
Trigger: AGTCTTGTGGGAGAATACCAAAGCCTTGGTCACCGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTTCGGTGACCAAGGCTTaGGTATTCTCCCACAAGACT +
Preference number: 5 (lower is better)
Translates to: SSHASVRCPPALFYCFFLSVTKA*VFSHKT
Trigger: AGTCTTGTGGGAGAATACCAAAGCCTTGGTCACCGA...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACTGAGTGCATGGCAGTaGGATTCTCCTGTTAAGCAC +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPLSAWQ*DSPVKH
Trigger: GTGCTTAACAGGAGAATCCAACTGCCATGCACTCAG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACTGAGTGCATGGCAGTaGGATTCTCCTGTTAAGCAC +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGLSAWQ*DSPVKH
Trigger: GTGCTTAACAGGAGAATCCAACTGCCATGCACTCAG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATCAAAGAGTTGTTCAATaGGGCCACAGATTCAAACTG +
Preference number: 5 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYQRVVQ*GHRFKL
Trigger: CAGTTTGAATCTGTGGCCCAATTGAACAACTCTTTG...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AGAGAGTTCCTCTGTGGTGGCTGCCTCTTTTGTTTTGGAAATTTCAGGGAGTTCTCCTCAAGTGGCATTTaGCCTTCGGATGAATTCAAA +
Preference number: 5 (lower is better)
Translates to: REFLCGGCLFCFGNFREFSSSGI*PSDEFK
Trigger: TTTGAATTCATCCGAAGGCAAAATGCCACTTGAGGA...GAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCACAGAGGAACTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CTTTCGTGTAGATGCTTTATTTCCAGCCAAGGCTCTTCACTGAAGCTGGGATTTCACAGAATCCTGCAGTaGTTGAAGAAGACTTTCGTG +
Preference number: 5 (lower is better)
Translates to: LSCRCFISSQGSSLKLGFHRILQ*LKKTFV
Trigger: CACGAAAGTCTTCTTCAACAACTGCAGGATTCTGTG...AAATCCCAGCTTCAGTGAAGAGCCTTGGCTGGAAATAAAGCATCTACACGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGTGACCGTCCAAGTTTaGCACAGAATCCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKVTVQV*HRILQL
Trigger: CAACTGCAGGATTCTGTGCAAAACTTGGACGGTCAC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGTGACCGTCCAAGTTTaGCACAGAATCCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPVTVQV*HRILQL
Trigger: CAACTGCAGGATTCTGTGCAAAACTTGGACGGTCAC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGCCGAATATCCTATATaGTGGAGAACCAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPAEYPI*WRTKAP
Trigger: TGGGGCCTTGGTTCTCCACAATATAGGATATTCGGC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGTAAGACAGTGGCAACGAGGACATGGACTGTCCAAGAACTGTCTCCATTTTGCTCAACAAGGCTTTCATaGAAGATTCAACTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: CKTVATRTWTVQELSPFCSTRLS*KIQLQQ
Trigger: TTGCTGCAGTTGAATCTTCAATGAAAGCCTTGTTGA...GCAAAATGGAGACAGTTCTTGGACAGTCCATGTCCTCGTTGCCACTGTCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACAGAAAATCCATGCTaGGTAGCCTGGAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKTENPC*VAWRSV
Trigger: CACTGACCTCCAGGCTACCAAGCATGGATTTTCTGT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAACAGAAAATCCATGCTaGGTAGCCTGGAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWITENPC*VAWRSV
Trigger: CACTGACCTCCAGGCTACCAAGCATGGATTTTCTGT...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATTCACCCAACAAATTCTaGGCCCATAAGATAGTCTCT +
Preference number: 5 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYSPNKF*AHKIVS
Trigger: AGAGACTATCTTATGGGCCAAGAATTTGTTGGGTGA...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGCTCCTGAAGATGTGTaGAGATTCCACTGTCAATTT +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCAPEDV*RFHCQF
Trigger: AAATTGACAGTGGAATCTCAACACATCTTCAGGAGC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACCAAACTCACGTAGTTTaGTCTCCACATCACTCGCTT +
Preference number: 5 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHQTHVV*SPHHSL
Trigger: AAGCGAGTGATGTGGAGACAAAACTACGTGAGTTTG...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTGGATTCCAATTCCTCTaGTTTTCGAAGAGGCATCTC +
Preference number: 5 (lower is better)
Translates to: RMLLRQHSISCLADASLFGFQFL*FSKRHL
Trigger: GAGATGCCTCTTCGAAAACAAGAGGAATTGGAATCC...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAGAGCCGACACAATCTaGAGCAAACATATGCCATCA +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKRADTI*SKHMPS
Trigger: TGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCAGTGTCCTCAAAGAGTCATAGTCAGCAGGATTGGCCAGCAAATGACTGGTATGCTGCCTCTTTTGTTTaGGAAATTTCAGGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: SVSSKSHSQQDWPANDWYAASFV*EISGSS
Trigger: AGAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGC...ATACCAGTCATTTGCTGGCCAATCCTGCTGACTATGACTCTTTGAGGACACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCAACCTCAGTTCCACTaGGTAAGACACTATCTCAGC +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSQPQFH*VRHYLS
Trigger: GCTGAGATAGTGTCTTACCAAGTGGAACTGAGGTTG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATACTCCTTCTTGTTCTaGCTTCAAATGCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSYSFLF*LQMLVK
Trigger: CTTCACCAGCATTTGAAGCAAGAACAAGAAGGAGTA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCCAGATGATTCCTGAGTaGTATCGTTATCATGTTGGC +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCQMIPE*YRYHVG
Trigger: GCCAACATGATAACGATACAACTCAGGAATCATCTG...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGCGCAGGTCTTCAAGTaGGGTGGTATAGGTTTTCAG +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGAQVFK*GGIGFQ
Trigger: CTGAAAACCTATACCACCCAACTTGAAGACCTGCGC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTTGCAACAAAGCATCTaGCTGGCTCTCAGTGACGAA +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSLQQSI*LALSDE
Trigger: TTCGTCACTGAGAGCCAGCAAGATGCTTTGTTGCAA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACAGTTCCACCATGCCTaGCAACAAAGCATCTTGCTG +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPQFHHA*QQSILL
Trigger: CAGCAAGATGCTTTGTTGCAAGGCATGGTGGAACTG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACAGAGACCTTTGAGTTaGCCGATAACCTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGQRPLS*PITSWS
Trigger: ACTCCAGGAGGTTATCGGCAAACTCAAAGGTCTCTG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCACTAAGTGGGAGCTaGAGGCTCACTTCATTCAAA +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSLSGS*RLTSFK
Trigger: TTTGAATGAAGTGAGCCTCAAGCTCCCACTTAGTGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCTGTCTGTAGAACTTaGTTTTCCATCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIAVCRT*FSICTS
Trigger: GCTGGTGCAGATGGAAAACAAAGTTCTACAGACAGC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGCTGCTCTTGATTTGTaGCTGGCCTTGATCAACTGG +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPAALDL*LALINW
Trigger: CCAGTTGATCAAGGCCAGCAACAAATCAAGAGCAGC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAACCAGGTGCGAAGGTaGCTCATGTTTTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSNQVRR*LMFLSN
Trigger: GTTGGACAAAAACATGAGCAACCTTCGCACCTGGTT...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCTGGCGGAGTCTACTTaGGAGCTCTGTGGATTCGGG +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNLAEST*ELCGFG
Trigger: CCCGAATCCACAGAGCTCCAAAGTAGACTCCGCCAG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACCACAGCAGCAGATTTaGACTCAACTGGTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPPQQQI*TQLVEV
Trigger: GACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTGG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACATGTCCACTTGAGGTaGACGTTCTACCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGHVHLR*TFYQLL
Trigger: AAGGAGCTGGTAGAACGTCAACCTCAAGTGGACATG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTACCGGCAGCTCAAAATaGCCAGCTGATTGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKITGSSK*PADWSK
Trigger: TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGT...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAACTGAACAGAACATTTaGGTGTATAACCGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKTEQNI*VYNRQL
Trigger: GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCACTGAACAGAACATTTaGGTGTATAACCGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLTEQNI*VYNRQL
Trigger: GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTTCTTCCATGCAGTCTaGGGGTATCAGCTGACATGT +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIFFHAV*GYQLTC
Trigger: ACATGTCAGCTGATACCCCAAGACTGCATGGAAGAA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS GCA 90 bp GCTTTGGGCAGATGCTTCTTCACATGCTTCAGTACGCTGTCCACCTaGTTTATTTTACTGTTTCTTCCTTCAAGAGTCAAGAAATCCTTC +
Preference number: 5 (lower is better)
Translates to: ALGRCFFTCFSTLST*FILLFLPSRVKKSF
Trigger: GAAGGATTTCTTGACTCTTGAAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGAAGCATCTGCCCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557005.1
CDS CCA 90 bp CAAAACATTCAAGGAGCAAGTTGGTGTTCTCGCCAGGCCAAGTCATaGCTTTCAAAAGATCACCCTTCTTGTCACTTAGCGCTAAATAAA +
Preference number: 5 (lower is better)
Translates to: QNIQGASWCSRQAKS*LSKDHPSCHLALNK
Trigger: TTTATTTAGCGCTAAGTGACAAGAAGGGTGATCTTTTGAAAGCCATGACTTGGCCTGGCGAGAACACCAACTTGCTCCTTGAATGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACATTTGCCATCTTGCTaGCACTTTAGAGCATTTCTT +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSHLPSC*HFRAFL
Trigger: AAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAATG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATTCATTTCCTCCAATTaGTTAGGTGGTACCAATGGC +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKFISSN*LGGTNG
Trigger: GCCATTGGTACCACCTAACAAATTGGAGGAAATGAA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGCTGATTATCTGATTTaGCAAATGGTGCCTCACTGT +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLADYLI*QMVPHC
Trigger: ACAGTGAGGCACCATTTGCAAAATCAGATAATCAGC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACCATTGCCTTTTCAGTaGATGGCTGATTATCTGATT +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSPLPFQ*MADYLI
Trigger: AATCAGATAATCAGCCATCAACTGAAAAGGCAATGG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGAAGTAATCCTGAATTaGTTGTTTTGCAGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSEVILN*LFCRWC
Trigger: ACACCACCTGCAAAACAACAAATTCAGGATTACTTC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAACAAGACTACTGTATTTaGGCACTGTTGATTCACGGT +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKQDYCI*ALLIHG
Trigger: ACCGTGAATCAACAGTGCCAAAATACAGTAGTCTTG...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTTCCGTGGCAGCTGTCTCCACCCTGGGAATTATCAGTGTTTCACTTTCTTGAAAGGTATTTCACTGCTTaGGAGCAAAAACTGTATTTC +
Preference number: 5 (lower is better)
Translates to: LPWQLSPPWELSVFHFLERYFTA*EQKLYF
Trigger: GAAATACAGTTTTTGCTCCAAAGCAGTGAAATACCT...TTCAAGAAAGTGAAACACTGATAATTCCCAGGGTGGAGACAGCTGCCACGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATGTACATGTTCCATCTaGTTCAAAATAGAGGACTCC +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSCTCSI*FKIEDS
Trigger: GGAGTCCTCTATTTTGAACAAGATGGAACATGTACA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATCCTCAAGTGGCATTTaGCCTTCGGATGAATTCAAA +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKSSSGI*PSDEFK
Trigger: TTTGAATTCATCCGAAGGCAAAATGCCACTTGAGGA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACAAGGATGTCAAATCTaGGGCTTTCTTGAGGAATTT +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSQGCQI*GFLEEF
Trigger: AAATTCCTCAAGAAAGCCCAAGATTTGACATCCTTG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTTCCTCAACCGCTATTaGATCCACAGGCTTATCAGA +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRFLNRY*IHRLIR
Trigger: TCTGATAAGCCTGTGGATCAAATAGCGGTTGAGGAA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATTTCCTCAACCGCTATTaGATCCACAGGCTTATCAGA +
Preference number: 5 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYFLNRY*IHRLIR
Trigger: TCTGATAAGCCTGTGGATCAAATAGCGGTTGAGGAA...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGATTTGAGAATGCTGTaGAGACAACATTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLDLRML*RQHSIS
Trigger: GGAGATGGAATGTTGTCTCAACAGCATTCTCAAATC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGATTTGAGAATGCTGTaGAGACAACATTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKDLRML*RQHSIS
Trigger: GGAGATGGAATGTTGTCTCAACAGCATTCTCAAATC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCGTTGAGCGTTTTGATTaGAGAATGCTGTTGAGACAA +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCVERFD*RMLLRQ
Trigger: TTGTCTCAACAGCATTCTCAAATCAAAACGCTCAAC...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAGTTGAGCGTTTTGATTaGAGAATGCTGTTGAGACAA +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSVERFD*RMLLRQ
Trigger: TTGTCTCAACAGCATTCTCAAATCAAAACGCTCAAC...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACGTTGAGCGTTTTGATTaGAGAATGCTGTTGAGACAA +
Preference number: 5 (lower is better)
Translates to: SSTWDSISAGTMVYISEYVERFD*RMLLRQ
Trigger: TTGTCTCAACAGCATTCTCAAATCAAAACGCTCAAC...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp ATAGGTTGTAAGGCTAGGAACCTTATCTTTGACCTCTTCAGCCAACGATTCCACGTTAAGACATTCTGTTaGTTCCAGTGGCTTAATGGC +
Preference number: 5 (lower is better)
Translates to: IGCKARNLIFDLFSQRFHVKTFC*FQWLNG
Trigger: GCCATTAAGCCACTGGAACAAACAGAATGTCTTAAC...GTGGAATCGTTGGCTGAAGAGGTCAAAGATAAGGTTCCTAGCCTTACAACCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCCAACCATGTTCAAGTaGCTTAATCTGGCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLPTMFK*LNLAFQ
Trigger: TTGGAAAGCCAGATTAAGCAACTTGAACATGGTTGG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAATGTTGCTGCTGCTGTaGCAGAGAAATCTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKMLLLL*QRNLSV
Trigger: GACACTGAGATTTCTCTGCAACAGCAGCAGCAACAT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGCTCCTCATAGATGTTaGTTAGCTCCTGAAGATGTG +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEAPHRC*LAPEDV
Trigger: CACATCTTCAGGAGCTAACAAACATCTATGAGGAGC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATTAAGTAATAGTTCATaGCGCTGTATACTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLSNSS*RCILSA
Trigger: GGCTGACAGTATACAGCGCAATGAACTATTACTTAA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAGCCAACTGATAAGCTCCTTCACATGTGCTTTGGGCAGATGCTTCTTCACATGAGTATTTCTTTCTCCTaGAATGAGTCATCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: EPTDKLLHMCFGQMLLHMSISFS*NESSKV
Trigger: GACCTTTGATGACTCATTCAAGGAGAAAGAAATACT...CATGTGAAGAAGCATCTGCCCAAAGCACATGTGAAGGAGCTTATCAGTTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCCATTTCTGCCCAAACTaGCTCCTGAAATGCTTCACA +
Preference number: 5 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCHFCPN*LLKCFT
Trigger: TGTGAAGCATTTCAGGAGCAAGTTTGGGCAGAAATG...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACATCATTCAAGACATTaGTGCGCAAATCAATGCTTG +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSHHSRH*CANQCL
Trigger: CAAGCATTGATTTGCGCACAAATGTCTTGAATGATG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACCATCATTCAAGACATTaGTGCGCAAATCAATGCTTG +
Preference number: 5 (lower is better)
Translates to: SSTWDSISAGTMVYISEYHHSRH*CANQCL
Trigger: CAAGCATTGATTTGCGCACAAATGTCTTGAATGATG...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGGATTCCAATTCCTCTaGTTTTCGAAGAGGCATCTC +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIGFQFL*FSKRHL
Trigger: GAGATGCCTCTTCGAAAACAAGAGGAATTGGAATCC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTAGAGCCGACACAATCTaGAGCAAACATATGCCATCA +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRRADTI*SKHMPS
Trigger: TGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCTTGTAAAAGCTGATTaGTCCGCTGAAACACAGGCA +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSLVKAD*SAETQA
Trigger: TGCCTGTGTTTCAGCGGACAAATCAGCTTTTACAAG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCATCTTCATCCCATTCATaGGTCTGTTTTATGACTACC +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSSSSHS*VCFMTT
Trigger: GGTAGTCATAAAACAGACCAATGAATGGGATGAAGA...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTACTCCTTCTTGTTCTaGCTTCAAATGCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLYSFLF*LQMLVK
Trigger: CTTCACCAGCATTTGAAGCAAGAACAAGAAGGAGTA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAAGGTTACTTGCTTCTaGGCGCAGGTCTTCAAGTTG +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGKVTCF*AQVFKL
Trigger: CAACTTGAAGACCTGCGCCAAGAAGCAAGTAACCTT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCAAACGCCACTTTACTTTaGGTTTGTTTTAAGTGGCCA +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSNATLL*VCFKWP
Trigger: TGGCCACTTAAAACAAACCAAAAGTAAAGTGGCGTT...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTTTCAGTCTCTCTTCTaGTGCTTCCAGCCAGTTGTT +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIFQSLF*CFQPVV
Trigger: AACAACTGGCTGGAAGCACAAGAAGAGAGACTGAAA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCAGGACACTGGAATTTaGGAGAAAGGCTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLQDTGI*EKGFFC
Trigger: ACAAAAGAAGCCTTTCTCCAAAATTCCAGTGTCCTG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTCACTAAGTGGGAGCTaGAGGCTCACTTCATTCAAA +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSSLSGS*RLTSFK
Trigger: TTTGAATGAAGTGAGCCTCAAGCTCCCACTTAGTGA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAGTCCGCCTTCATAGTTaGAAGTTCTTTCAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKVRLHS*KFFQVL
Trigger: CAGAACTTGAAAGAACTTCAAACTATGAAGGCGGAC...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCAGCTGCTCTTGATTaGTTGCTGGCCTTGATCAAC +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSAALD*LLALIN
Trigger: GTTGATCAAGGCCAGCAACAAATCAAGAGCAGCTGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATATCAGAGGGAGGCTTaGCCATCTTTAACATTTCCA +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKYQREA*PSLTFP
Trigger: TGGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGTTTGCAGAAATTCCTaGCTGCTCACGTTGACAGAG +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPVCRNS*LLTLTE
Trigger: CTCTGTCAACGTGAGCAGCAAGGAATTTCTGCAAAC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGAATTCACAAAGTGCTaGGCTCTTCAGGAAACTGAC +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSEFTKC*ALQETD
Trigger: GTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGAATTCACAAAGTGCTaGGCTCTTCAGGAAACTGAC +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEEFTKC*ALQETD
Trigger: GTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGAATTCACAAAGTGCTaGGCTCTTCAGGAAACTGAC +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKREFTKC*ALQETD
Trigger: GTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS TCA 90 bp TGTTCTAGTTCCTTAATCAGCTCTTTTTCGTTATGGAGGTCCTCGTaGAGCTCTGGAAGAGGATCTTCACTTTGTGCCTTTAAAACTTGC +
Preference number: 5 (lower is better)
Translates to: CSSSLISSFSLWRSS*SSGRGSSLCAFKTC
Trigger: GCAAGTTTTAAAGGCACAAAGTGAAGATCCTCTTCCAGAGCTTCACGAGGACCTCCATAACGAAAAAGAGCTGATTAAGGAACTAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 90 bp TTTTACCACATTGATCTGGACTTTCTCTTTAGCTTCTTGAATCTTTaGCTGAAGCCCAGTTGTGAGAACATGTTGAAAGGACTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: FYHIDLDFLFSFLNL*LKPSCENMLKGLLA
Trigger: AGCCAGGAGTCCTTTCAACATGTTCTCACAACTGGGCTTCAGGCAAAGATTCAAGAAGCTAAAGAGAAAGTCCAGATCAATGTGGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS GCA 90 bp ATCTCAAGGTCTCCAATGATAACACCACAGGCTTGCTGTGTTCCATaGAGTACCAGAATCGGATTGTCATCATATTCACTTCATCATAGA +
Preference number: 5 (lower is better)
Translates to: ISRSPMITPQACCVP*STRIGLSSYSLHHR
Trigger: TCTATGATGAAGTGAATATGATGACAATCCGATTCTGGTACTGCATGGAACACAGCAAGCCTGTGGTGTTATCATTGGAGACCTTGAGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 90 bp TCCTTCAGCTTCTTCACCCTTGATCCGATGACATCAAAAAGATGTTaGCAACGATCGTTAATTTTGTTGAGCTTGTCATCGATCTCAGCT +
Preference number: 5 (lower is better)
Translates to: SFSFFTLDPMTSKRC*QRSLILLSLSSISA
Trigger: AGCTGAGATCGATGACAAGCTCAACAAAATTAACGATCGTTGGCAACATCTTTTTGATGTCATCGGATCAAGGGTGAAGAAGCTGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000555002.6
ENST00000555612.5
CDS CCA 90 bp CGGTTTCTTAGGAATGTCAAGGCATGTTCTATATTGATTCTACACTaGAAGGTATTAGATCCTTTATCCCGAGGCAACTGTTGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: RFLRNVKACSILILH*KVLDPLSRGNCCPE
Trigger: TTCTGGGCAACAGTTGCCTCGGGATAAAGGATCTAATACCTTCCAGTGTAGAATCAATATAGAACATGCCTTGACATTCCTAAGAAACCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS CCA 90 bp TCATCGATCTCAGCTGCTCTTGATTTGTTGCTGGCCTTGATCAACTaGTCACCCATCTGCTTTAACTGTAACTTGTTTTCACTAAACAAG +
Preference number: 5 (lower is better)
Translates to: SSISAALDLLLALIN*SPICFNCNLFSLNK
Trigger: CTTGTTTAGTGAAAACAAGTTACAGTTAAAGCAGATGGGTGACCAGTTGATCAAGGCCAGCAACAAATCAAGAGCAGCTGAGATCGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CCA 90 bp GTTCTTTCCAGTAATTCAGAGTATGCTGGGAAGATTCCAACCACTTaGTTAACTGATCCGAATCTCTGTTATAAACCCCCAAAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: VLSSNSEYAGKIPTT*LTDPNLCYKPPKRL
Trigger: CAGCCTTTTTGGGGGTTTATAACAGAGATTCGGATCAGTTAACCAAGTGGTTGGAATCTTCCCAGCATACTCTGAATTACTGGAAAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAAAGAAGGGCCTTTCTaGCAGACATTTGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGKEGPF*QTFAIL
Trigger: CAAGATGGCAAATGTCTGCAAGAAAGGCCCTTCTTT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTCTCAGATTGTCTTTGTaGGATCTATGCTTCACACTC +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSLRLSL*DLCFTL
Trigger: GAGTGTGAAGCATAGATCCAACAAAGACAATCTGAG...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAAGGCCTCTCTCAGATaGTCTTTGTTGGATCTATGC +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGKASLR*SLLDLC
Trigger: GCATAGATCCAACAAAGACAATCTGAGAGAGGCCTT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAAAGGCCTCTCTCAGATaGTCTTTGTTGGATCTATGC +
Preference number: 5 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIKASLR*SLLDLC
Trigger: GCATAGATCCAACAAAGACAATCTGAGAGAGGCCTT...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACTATCCATCAGGCTCTaGAATAAAGTCATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLSIRL*NKVIFS
Trigger: AGAGAAAATGACTTTATTCAAGAGCCTGATGGATAG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTTCATTTCCTCCAATTaGTTAGGTGGTACCAATGGC +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIFISSN*LGGTNG
Trigger: GCCATTGGTACCACCTAACAAATTGGAGGAAATGAA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCGTAATCCTGAATTTGTaGTTTTGCAGGTGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLVILNL*FCRWCS
Trigger: TGAACACCACCTGCAAAACAACAAATTCAGGATTAC...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCCTTTAATACAAAGTaGCCTGGCTCTTCTAAGCGG +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSFNTK*PGSSKR
Trigger: CCGCTTAGAAGAGCCAGGCAACTTTGTATTAAAGGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCAAGCCTCTAGTAATTaGTTTTCCTCAGTGAATTCC +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLQASSN*FSSVNS
Trigger: GGAATTCACTGAGGAAAACAAATTACTAGAGGCTTG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTCAAAACTCTCCCACATaGTTCAAGACATTCGGTGAC +
Preference number: 5 (lower is better)
Translates to: SSHASVRCPPALFYCFFLQNSPT*FKTFGD
Trigger: GTCACCGAATGTCTTGAACAATGTGGGAGAGTTTTG...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTGTACATGTTCCATCTaGTTCAAAATAGAGGACTCC +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLCTCSI*FKIEDS
Trigger: GGAGTCCTCTATTTTGAACAAGATGGAACATGTACA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTTCCACCTGGGATTCAATCTCTGCAGGGACTATGGTGTACATTTCGGAATACAGGTTCACTTTAATGTaGCTGAACCAGTCATTAAAG +
Preference number: 5 (lower is better)
Translates to: SSTWDSISAGTMVYISEYRFTLM*LNQSLK
Trigger: CTTTAATGACTGGTTCAGCAACATTAAAGTGAACCT...GTATTCCGAAATGTACACCATAGTCCCTGCAGAGATTGAATCCCAGGTGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTCAAAGAGTTGTTCAATaGGGCCACAGATTCAAACTG +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIQRVVQ*GHRFKL
Trigger: CAGTTTGAATCTGTGGCCCAATTGAACAACTCTTTG...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTTCCTCAAGTGGCATTTaGCCTTCGGATGAATTCAAA +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSSSSGI*PSDEFK
Trigger: TTTGAATTCATCCGAAGGCAAAATGCCACTTGAGGA...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTCCTCAAGTGGCATTTaGCCTTCGGATGAATTCAAA +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESSSGI*PSDEFK
Trigger: TTTGAATTCATCCGAAGGCAAAATGCCACTTGAGGA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCAAGGATGTCAAATCTaGGGCTTTCTTGAGGAATTT +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLQGCQI*GFLEEF
Trigger: AAATTCCTCAAGAAAGCCCAAGATTTGACATCCTTG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATTCCTCAACCGCTATTaGATCCACAGGCTTATCAGA +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPFLNRY*IHRLIR
Trigger: TCTGATAAGCCTGTGGATCAAATAGCGGTTGAGGAA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGACCATGTTGTAGAGCAAAGCCTGCTTCCTGTTTCTTCTTTAGTTCTATGAGCGATTTGAGAATGCTGTaGAGACAACATTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: RPCCRAKPASCFFFSSMSDLRML*RQHSIS
Trigger: GGAGATGGAATGTTGTCTCAACAGCATTCTCAAATC...GCTCATAGAACTAAAGAAGAAACAGGAAGCAGGCTTTGCTCTACAACATGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGTTAAGACATTCTGTTaGTTCCAGTGGCTTAATGGC +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSVKTFC*FQWLNG
Trigger: GCCATTAAGCCACTGGAACAAACAGAATGTCTTAAC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCCAACCATGTTCAAGTaGCTTAATCTGGCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEPTMFK*LNLAFQ
Trigger: TTGGAAAGCCAGATTAAGCAACTTGAACATGGTTGG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCAGTATTTCTTTCTCCTaGAATGAGTCATCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: LGWNVLACFYNICDGHHCSISFS*NESSKV
Trigger: GACCTTTGATGACTCATTCAAGGAGAAAGAAATACT...GCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACATTTCTGCCCAAACTaGCTCCTGAAATGCTTCACA +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPHFCPN*LLKCFT
Trigger: TGTGAAGCATTTCAGGAGCAAGTTTGGGCAGAAATG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACATTTCTGCCCAAACTaGCTCCTGAAATGCTTCACA +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGHFCPN*LLKCFT
Trigger: TGTGAAGCATTTCAGGAGCAAGTTTGGGCAGAAATG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGGATTCCAATTCCTCTaGTTTTCGAAGAGGCATCTC +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPGFQFL*FSKRHL
Trigger: GAGATGCCTCTTCGAAAACAAGAGGAATTGGAATCC...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCTCAGTTTCCTGTGCTTaGAAAGCTTCCTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCSVSCA*KASFIA
Trigger: AGCAATGAAGGAAGCTTTCAAAGCACAGGAAACTGA...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATGGTGGCTGCCTCTTTaGTTTTGGAAATTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKWWLPL*FWKFQG
Trigger: TCCCTGAAATTTCCAAAACAAAAGAGGCAGCCACCA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTGAAGGAATGTCTTTCTaGGATTTCAGTCTGCACCAA +
Preference number: 5 (lower is better)
Translates to: WCITGSSKLPADWSKTDSEGMSF*DFSLHQ
Trigger: TTGGTGCAGACTGAAATCCAAGAAAGACATTCCTTC...AGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATGAAGGAATGTCTTTCTaGGATTTCAGTCTGCACCAA +
Preference number: 5 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYEGMSF*DFSLHQ
Trigger: TTGGTGCAGACTGAAATCCAAGAAAGACATTCCTTC...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp GGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACACCACTGCTCACTATTTTTCTCCTCATaGCATATGATGGTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: GWNVLACFYNICDGHHCSLFFSS*HMMVSF
Trigger: AAAGCTCACCATCATATGCAATGAGGAGAAAAATAG...TGAGCAGTGGTGTCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGCAGAGAGTTTAGCTGTTCTGAGAGACGCCAAAAAGTCTTCCAGAGCTTTGAGCTATTTTTCTCCTCATaGCATATGATGGTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: SREFSCSERRQKVFQSFELFFSS*HMMVSF
Trigger: AAAGCTCACCATCATATGCAATGAGGAGAAAAATAG...CTCAAAGCTCTGGAAGACTTTTTGGCGTCTCTCAGAACAGCTAAACTCTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTCTTCATCCCATTCATaGGTCTGTTTTATGACTACC +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSSSHS*VCFMTT
Trigger: GGTAGTCATAAAACAGACCAATGAATGGGATGAAGA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAATGCTTCCTGAACAATaGTTCCAGAGGATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPMLPEQ*FQRMRK
Trigger: CTTCCTCATCCTCTGGAACAATTGTTCAGGAAGCAT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAGTCTGGTGTGAGGATTaGTGCCATGGAATTATCAGA +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGVWCED*CHGIIR
Trigger: TCTGATAATTCCATGGCACAAATCCTCACACCAGAC...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGCTTCAGCCTCATGTaGAGTGGCTCCATTATCTCC +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNRFSLM*SGSIIS
Trigger: GGAGATAATGGAGCCACTCAACATGAGGCTGAAGCG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATGTATCGTTATCATGTaGGCAATACTGGGGCCACAT +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKCIVIM*AILGPH
Trigger: ATGTGGCCCCAGTATTGCCAACATGATAACGATACA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATTTGGCAGAGTATGCTaGGATCAACAACATGTCAGC +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKFGRVC*DQQHVS
Trigger: GCTGACATGTTGTTGATCCAAGCATACTCTGCCAAA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATTTCAGTCTCTCTTCTaGTGCTTCCAGCCAGTTGTT +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGFQSLF*CFQPVV
Trigger: AACAACTGGCTGGAAGCACAAGAAGAGAGACTGAAA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGGAGAAAGGCTTCTTTaGTTTTCTGCACATCATGCT +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRGERLL*FSAHHA
Trigger: AGCATGATGTGCAGAAAACAAAAGAAGCCTTTCTCC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTCAGGACACTGGAATTTaGGAGAAAGGCTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRQDTGI*EKGFFC
Trigger: ACAAAAGAAGCCTTTCTCCAAAATTCCAGTGTCCTG...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCACTAAGTGGGAGCTaGAGGCTCACTTCATTCAAA +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSLSGS*RLTSFK
Trigger: TTTGAATGAAGTGAGCCTCAAGCTCCCACTTAGTGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAGAAGTAGTGAAATCTaGCCACTGCCTCACCAGCCC +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNRSSEI*PLPHQP
Trigger: GGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTCT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGTCCGCCTTCATAGTTaGAAGTTCTTTCAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRVRLHS*KFFQVL
Trigger: CAGAACTTGAAAGAACTTCAAACTATGAAGGCGGAC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTGTGCAAATGCTCTATTaGCTCCTTCAAAACCATCAC +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRVQMLY*LLQNHH
Trigger: GTGATGGTTTTGAAGGAGCAAATAGAGCATTTGCAC...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCCGATCGTTAATTTTGTaGAGCTTGTCATCGATCTCA +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLRSLIL*SLSSIS
Trigger: TGAGATCGATGACAAGCTCAACAAAATTAACGATCG...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCCTGTCACCTTCCATTaGCTTGTAGTGATGCTCGGG +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNPVTFH*LVVMLG
Trigger: CCCGAGCATCACTACAAGCAAATGGAAGGTGACAGG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAACTGAACAGAACATTTaGGTGTATAACCGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPTEQNI*VYNRQL
Trigger: GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTCAGTTCTTCAGTTGTaGGGTATCTTGCAGATGATT +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSVLQL*GILQMI
Trigger: AATCATCTGCAAGATACCCAACAACTGAAGAACTGA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS-3UTR CAA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATAACTTATTCATGCCCTTaGGAGCTGCTTTCAGAACTC +
Preference number: 5 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWITYSCP*ELLSEL
Trigger: GAGTTCTGAAAGCAGCTCCAAAGGGCATGAATAAGT...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS TCA 90 bp ATAAGATGCTTCAAAGATTCTTCCATTGAGGTGTCCACATCATCTTaGTCCAAAACAGATTTGGCTTCTGCCTCCCAGATTTCCACTTGT +
Preference number: 5 (lower is better)
Translates to: IRCFKDSSIEVSTSS*SKTDLASASQISTC
Trigger: ACAAGTGGAAATCTGGGAGGCAGAAGCCAAATCTGTTTTGGATCAAGATGATGTGGACACCTCAATGGAAGAATCTTTGAAGCATCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS TCA 90 bp TCATATATGATTCAAGTTCCTTCTGGGATTCTTCCATCTTCAGCCTaGTGTCCAAATCTGGTGAAACGTCAGTTAAGTTCTTCAACGCTG +
Preference number: 5 (lower is better)
Translates to: SYMIQVPSGILPSSA*CPNLVKRQLSSSTL
Trigger: CAGCGTTGAAGAACTTAACTGACGTTTCACCAGATTTGGACATCAGGCTGAAGATGGAAGAATCCCAGAAGGAACTTGAATCATATATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS TCA 90 bp TACAGAGAACTTCTTCACCTTCTCCCGTATGCCAACAAGAGTGTCTaGATTACATTCATCTCACTCTTACACAGTGAAGTAGGTTTCCAT +
Preference number: 5 (lower is better)
Translates to: YRELLHLLPYANKSV*ITFISLLHSEVGFH
Trigger: ATGGAAACCTACTTCACTGTGTAAGAGTGAGATGAATGTAATTCAGACACTCTTGTTGGCATACGGGAGAAGGTGAAGAAGTTCTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557060.1
CDS GCA 90 bp TCAGAAATCAGGATACTACAGAGAACTTCTTCACCTTCTCCCGTATaGCAACAAGAGTGTCTGAATTACATTCATCTCACTCTTACACAG +
Preference number: 5 (lower is better)
Translates to: SEIRILQRTSSPSPV*QQECLNYIHLTLTQ
Trigger: CTGTGTAAGAGTGAGATGAATGTAATTCAGACACTCTTGTTGGCATACGGGAGAAGGTGAAGAAGTTCTCTGTAGTATCCTGATTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557060.1
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTCTCTCAGATTGTCTTaGTTGGATCTATGCTTCACA +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESLRLS*LDLCFT
Trigger: TGTGAAGCATAGATCCAACAAAGACAATCTGAGAGA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTTTCATTTCCTCCAATTaGTTAGGTGGTACCAATGGC +
Preference number: 5 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFFISSN*LGGTNG
Trigger: GCCATTGGTACCACCTAACAAATTGGAGGAAATGAA...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACTCCCAGATTTCCACTaGTCCAATGAGTTTTTCAAC +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGLPDFH*SNEFFN
Trigger: GTTGAAAAACTCATTGGACAAGTGGAAATCTGGGAG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTCAAACATAGAGCCTTaGGCAATAAGATGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLSNIEP*AIRCFK
Trigger: TTTGAAGCATCTTATTGCCAAAGGCTCTATGTTTGA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CTTTCGTGTAGATGCTTTATTTCCAGCCAAGGCTCTTCACTGAAGCTGGGATTTTCAAACATAGAGCCTTaGGCAATAAGATGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: LSCRCFISSQGSSLKLGFSNIEP*AIRCFK
Trigger: TTTGAAGCATCTTATTGCCAAAGGCTCTATGTTTGA...AAATCCCAGCTTCAGTGAAGAGCCTTGGCTGGAAATAAAGCATCTACACGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AAGCACTTCTGTACATGTTCCATCTTGTTCAAAATAGAGGACTCCATGACCTGCCCTGAATTTGTTGTTTaGCAGGTGGTGTTCAAGAAT +
Preference number: 5 (lower is better)
Translates to: KHFCTCSILFKIEDSMTCPEFVV*QVVFKN
Trigger: ATTCTTGAACACCACCTGCAAAACAACAAATTCAGG...GCAGGTCATGGAGTCCTCTATTTTGAACAAGATGGAACATGTACAGAAGTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGAAGTAATCCTGAATTaGTTGTTTTGCAGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKIEVILN*LFCRWC
Trigger: ACACCACCTGCAAAACAACAAATTCAGGATTACTTC...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGGAAGTAATCCTGAATTaGTTGTTTTGCAGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEEVILN*LFCRWC
Trigger: ACACCACCTGCAAAACAACAAATTCAGGATTACTTC...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAACTAGTTCCTGTAAAGTATACTGAAGTTGTAGTTTGGCTTCGGGGCTGGATACAAGACTACTGTATTTaGGCACTGTTGATTCACGGT +
Preference number: 5 (lower is better)
Translates to: KLVPVKYTEVVVWLRGWIQDYCI*ALLIHG
Trigger: ACCGTGAATCAACAGTGCCAAAATACAGTAGTCTTG...TATCCAGCCCCGAAGCCAAACTACAACTTCAGTATACTTTACAGGAACTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCGGTGACCAAGGCTTaGGTATTCTCCCACAAGACT +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSVTKA*VFSHKT
Trigger: AGTCTTGTGGGAGAATACCAAAGCCTTGGTCACCGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTATTCCTTCAAAGAGTaGTTCAATTGGGCCACAGAT +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEYSFKE*FNWATD
Trigger: ATCTGTGGCCCAATTGAACAACTCTTTGAAGGAATA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTTATTCCTTCAAAGAGTaGTTCAATTGGGCCACAGAT +
Preference number: 5 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCYSFKE*FNWATD
Trigger: ATCTGTGGCCCAATTGAACAACTCTTTGAAGGAATA...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGCTAAATGGAGTGTGTaGTCCCACTGGTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNAKWSV*SHWLLM
Trigger: CATCAGCAACCAGTGGGACAACACACTCCATTTAGC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGCAAGGATGTCAAATCTaGGGCTTTCTTGAGGAATTT +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPEQGCQI*GFLEEF
Trigger: AAATTCCTCAAGAAAGCCCAAGATTTGACATCCTTG...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATCAAGGATGTCAAATCTaGGGCTTTCTTGAGGAATTT +
Preference number: 5 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYQGCQI*GFLEEF
Trigger: AAATTCCTCAAGAAAGCCCAAGATTTGACATCCTTG...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGCCGAATATCCTATATaGTGGAGAACCAAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNAEYPI*WRTKAP
Trigger: TGGGGCCTTGGTTCTCCACAATATAGGATATTCGGC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTCAACAAGGCTTTCATaGAAGATTCAACTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPESTRLS*KIQLQQ
Trigger: TTGCTGCAGTTGAATCTTCAATGAAAGCCTTGTTGA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATAGTCTCTTTCATCTaGTTCCTTATGTCACACTTC +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKIVSFI*FLMSHF
Trigger: GAAGTGTGACATAAGGAACAAGATGAAAGAGACTAT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCATAGTCTCTTTCATCTaGTTCCTTATGTCACACTTC +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLIVSFI*FLMSHF
Trigger: GAAGTGTGACATAAGGAACAAGATGAAAGAGACTAT...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCACCCAACAAATTCTaGGCCCATAAGATAGTCTCT +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSPNKF*AHKIVS
Trigger: AGAGACTATCTTATGGGCCAAGAATTTGTTGGGTGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGCTCCTGAAGATGTGTaGAGATTCCACTGTCAATTT +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKAPEDV*RFHCQF
Trigger: AAATTGACAGTGGAATCTCAACACATCTTCAGGAGC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCAGTTTCCTGTGCTTaGAAAGCTTCCTTCATTGCT +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSVSCA*KASFIA
Trigger: AGCAATGAAGGAAGCTTTCAAAGCACAGGAAACTGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAATTTCTTAAGGATGCTTaGAAGCTCCTCAAATTGTTC +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKFLKDA*KLLKLF
Trigger: GAACAATTTGAGGAGCTTCAAAGCATCCTTAAGAAA...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTCTTCATCCCATTCATaGGTCTGTTTTATGACTACC +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKISSSHS*VCFMTT
Trigger: GGTAGTCATAAAACAGACCAATGAATGGGATGAAGA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATACTCCTTCTTGTTCTaGCTTCAAATGCTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKYSFLF*LQMLVK
Trigger: CTTCACCAGCATTTGAAGCAAGAACAAGAAGGAGTA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTCTTTCTACTCCTTCTaGTTCTTGCTTCAAATGCTG +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRSFYSF*FLLQML
Trigger: CAGCATTTGAAGCAAGAACAAGAAGGAGTAGAAAGA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCTTCTTCCATGTCCTaGTCATGCTTCCAAAGTGAA +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSSSMS*SCFQSE
Trigger: TTCACTTTGGAAGCATGACAAGGACATGGAAGAAGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCCCTCTTCTGTTTGGTaGGGCCTTAGGGAACATTCT +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNPSSVW*GLREHS
Trigger: AGAATGTTCCCTAAGGCCCAACCAAACAGAAGAGGG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAAATCTTTCTGTTCCATaGGTTTTAACTCCAGAACCT +
Preference number: 5 (lower is better)
Translates to: RAELGTEQNILVYNRQLKNLSVP*VLTPEP
Trigger: AGGTTCTGGAGTTAAAACCAATGGAACAGAAAGATT...TTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACAGATGATTCCTGAGTaGTATCGTTATCATGTTGGC +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKQMIPE*YRYHVG
Trigger: GCCAACATGATAACGATACAACTCAGGAATCATCTG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGCGCAGGTCTTCAAGTaGGGTGGTATAGGTTTTCAG +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNAQVFK*GGIGFQ
Trigger: CTGAAAACCTATACCACCCAACTTGAAGACCTGCGC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGAACGCCACTTTACTTTaGGTTTGTTTTAAGTGGCCA +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPENATLL*VCFKWP
Trigger: TGGCCACTTAAAACAAACCAAAAGTAAAGTGGCGTT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCTTGAATATCTGGAAGTaGAGTTATGAGCATTGTCCA +
Preference number: 5 (lower is better)
Translates to: KRAELGTEQNILVYNRQLLNIWK*SYEHCP
Trigger: TGGACAATGCTCATAACTCAACTTCCAGATATTCAA...GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACGGCAATTTCTCCATTaGAAGCTGGTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPRQFLH*KLVKFF
Trigger: GAAAAACTTCACCAGCTTCAAATGGAGAAATTGCCG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAGGAGAAAGGCTTCTTTaGTTTTCTGCACATCATGCT +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKGERLL*FSAHHA
Trigger: AGCATGATGTGCAGAAAACAAAAGAAGCCTTTCTCC...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACAGGACACTGGAATTTaGGAGAAAGGCTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGQDTGI*EKGFFC
Trigger: ACAAAAGAAGCCTTTCTCCAAAATTCCAGTGTCCTG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGAATACAACCCATGTATaGAGTCTGTCTTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPENTTHV*SLSSIS
Trigger: GGAGATTGAAGACAGACTCAATACATGGGTTGTATT...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ATTAAATCTTGGGACACTTGCTCCCGTAACTGTTTGAGTTTCTTCTCAATAACATCAGCTGCTCTTGATTaGTTGCTGGCCTTGATCAAC +
Preference number: 5 (lower is better)
Translates to: IKSWDTCSRNCLSFFSITSAALD*LLALIN
Trigger: GTTGATCAAGGCCAGCAACAAATCAAGAGCAGCTGA...TGTTATTGAGAAGAAACTCAAACAGTTACGGGAGCAAGTGTCCCAAGATTTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTTAATTTTGTTGAGCTaGTCATCGATCTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKILILLS*SSISAA
Trigger: AGCAGCTGAGATCGATGACAAGCTCAACAAAATTAA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CTCAGTTCTATTTCCTGGATATCAGAGGGAGGCTTTGCCATCTTTAACATTTCCCGATCGTTAATTTTGTaGAGCTTGTCATCGATCTCA +
Preference number: 5 (lower is better)
Translates to: LSSISWISEGGFAIFNISRSLIL*SLSSIS
Trigger: TGAGATCGATGACAAGCTCAACAAAATTAACGATCG...GGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATATCCAGGAAATAGAACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGATATCAGAGGGAGGCTTaGCCATCTTTAACATTTCCA +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGYQREA*PSLTFP
Trigger: TGGAAATGTTAAAGATGGCAAAGCCTCCCTCTGATA...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCCACAGCAGCAGATTTaGACTCAACTGGTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNPQQQI*TQLVEV
Trigger: GACTTCCACCAGTTGAGTCAAAATCTGCTGCTGTGG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAATGCTGTTGAGACAACATTCCATCTCCTGCTTAGCAGATGCAAGCCTGTTTAATCAGTCTTTTGCATaGTGTAAGTGGAAATTCTCC +
Preference number: 5 (lower is better)
Translates to: RMLLRQHSISCLADASLFNQSFA*CKWKFS
Trigger: GGAGAATTTCCACTTACACAATGCAAAAGACTGATT...AAACAGGCTTGCATCTGCTAAGCAGGAGATGGAATGTTGTCTCAACAGCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS TCA 90 bp GTACACAGACATACCACCTTCTTAAGATCCTATACGAAAGAAGGGTaGTGGAGATGTGGCTATCTCCAATGGCAGATGATTTATAATAGT +
Preference number: 5 (lower is better)
Translates to: VHRHTTFLRSYTKEG*WRCGYLQWQMIYNS
Trigger: ACTATTATAAATCATCTGCCATTGGAGATAGCCACATCTCCATCACCCTTCTTTCGTATAGGATCTTAAGAAGGTGGTATGTCTGTGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557005.1
CDS GCA 90 bp AGTTTGATGCTCCACATTGTTCATCCAGCTAATCATTTCTGTGATTaGTTTACGAGACGGCAATTTCTCCATTTGAAGCTGGTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: SLMLHIVHPANHFCD*FTRRQFLHLKLVKF
Trigger: AAACTTCACCAGCTTCAAATGGAGAAATTGCCGTCTCGTAAAGCAATCACAGAAATGATTAGCTGGATGAACAATGTGGAGCATCAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACATTTGCCATCTTGCTaGCACTTTAGAGCATTTCTT +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPHLPSC*HFRAFL
Trigger: AAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAATG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTGTTTGTTCCAGTGGCTTAATGGCTGCTTTCTTTGCTTCCAACTGGGTATATCTATCCATCAGGCTCTaGAATAAAGTCATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SVCSSGLMAAFFASNWVYLSIRL*NKVIFS
Trigger: AGAGAAAATGACTTTATTCAAGAGCCTGATGGATAG...ATATACCCAGTTGGAAGCAAAGAAAGCAGCCATTAAGCCACTGGAACAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACCATTGCCTTTTCAGTaGATGGCTGATTATCTGATT +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPPLPFQ*MADYLI
Trigger: AATCAGATAATCAGCCATCAACTGAAAAGGCAATGG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATGTACATGTTCCATCTaGTTCAAAATAGAGGACTCC +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKCTCSI*FKIEDS
Trigger: GGAGTCCTCTATTTTGAACAAGATGGAACATGTACA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTTGTACATGTTCCATCTaGTTCAAAATAGAGGACTCC +
Preference number: 5 (lower is better)
Translates to: SSHASVRCPPALFYCFFLCTCSI*FKIEDS
Trigger: GGAGTCCTCTATTTTGAACAAGATGGAACATGTACA...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTATAGTCTCTTTCATCTaGTTCCTTATGTCACACTTC +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRIVSFI*FLMSHF
Trigger: GAAGTGTGACATAAGGAACAAGATGAAAGAGACTAT...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TTTCTCCCACAGAGCCGACACAATCTTGAGCAAACATATGCCATCATTTTCTGTATAGTCTCTTTCATCTaGTTCCTTATGTCACACTTC +
Preference number: 5 (lower is better)
Translates to: FLPQSRHNLEQTYAIIFCIVSFI*FLMSHF
Trigger: GAAGTGTGACATAAGGAACAAGATGAAAGAGACTAT...ACAGAAAATGATGGCATATGTTTGCTCAAGATTGTGTCGGCTCTGTGGGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATTAAGTAATAGTTCATaGCGCTGTATACTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPLSNSS*RCILSA
Trigger: GGCTGACAGTATACAGCGCAATGAACTATTACTTAA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTTTAAGTAATAGTTCATaGCGCTGTATACTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: SSHASVRCPPALFYCFFLLSNSS*RCILSA
Trigger: GGCTGACAGTATACAGCGCAATGAACTATTACTTAA...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTAGTATTTCTTTCTCCTaGAATGAGTCATCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKISISFS*NESSKV
Trigger: GACCTTTGATGACTCATTCAAGGAGAAAGAAATACT...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTTTCTTAAGGATGCTTaGAAGCTCCTCAAATTGTTC +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRFLKDA*KLLKLF
Trigger: GAACAATTTGAGGAGCTTCAAAGCATCCTTAAGAAA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATCCAGCTCATTTAGTTaGGAATGCCATAGATCTAAC +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKSSSFS*ECHRSN
Trigger: GTTAGATCTATGGCATTCCAAACTAAATGAGCTGGA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAAGCTCCTCAAATTGTTCTGACTTTTCTGGGTGATCCTGGAATGCCATATTTTTCCAGCTCATTTAGTTaGGAATGCCATAGATCTAAC +
Preference number: 5 (lower is better)
Translates to: EAPQIVLTFLGDPGMPYFSSSFS*ECHRSN
Trigger: GTTAGATCTATGGCATTCCAAACTAAATGAGCTGGA...AAAATATGGCATTCCAGGATCACCCAGAAAAGTCAGAACAATTTGAGGAGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCTTTCTACTCCTTCTaGTTCTTGCTTCAAATGCTG +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSFYSF*FLLQML
Trigger: CAGCATTTGAAGCAAGAACAAGAAGGAGTAGAAAGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTTTTTGTCTGCTGAATaGTGGCCTTTCAGTTACAAT +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRFLSAE*WPFSYN
Trigger: ATTGTAACTGAAAGGCCACAATTCAGCAGACAAAAA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTTCATGATGCAGATATaGCCACTTATCTCCATTTTG +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRFMMQI*PLISIL
Trigger: CAAAATGGAGATAAGTGGCAATATCTGCATCATGAA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGTGCTCCAGGCAGACTaGAAGGTTGTCAAAACATTC +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNVLQAD*KVVKTF
Trigger: GAATGTTTTGACAACCTTCAAGTCTGCCTGGAGCAC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAAACGCCACTTTACTTTaGGTTTGTTTTAAGTGGCCA +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPNATLL*VCFKWP
Trigger: TGGCCACTTAAAACAAACCAAAAGTAAAGTGGCGTT...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp ATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAACTGATTCTAAGCGTTTGAATATCTGGAAGTaGAGTTATGAGCATTGTCCA +
Preference number: 5 (lower is better)
Translates to: ITGSSKLPADWSKTDSKRLNIWK*SYEHCP
Trigger: TGGACAATGCTCATAACTCAACTTCCAGATATTCAA...ACGCTTAGAATCAGTTTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCGGCAGCTCAAAATTTTGAATATCTGGAAGTaGAGTTATGAGCATTGTCCA +
Preference number: 5 (lower is better)
Translates to: AELGTEQNILVYNRQLKILNIWK*SYEHCP
Trigger: TGGACAATGCTCATAACTCAACTTCCAGATATTCAA...AATTTTGAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp ACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCAGAGTTGAATATCTGGAAGTaGAGTTATGAGCATTGTCCA +
Preference number: 5 (lower is better)
Translates to: TNQNSQSAWLFRKLTFPELNIWK*SYEHCP
Trigger: TGGACAATGCTCATAACTCAACTTCCAGATATTCAA...CTCTGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCTTGAGATGCAGAACTaGGTGAATGCACGGAGTCTT +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNLEMQN*VNARSL
Trigger: AAGACTCCGTGCATTCACCAAGTTCTGCATCTCAAG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCAGCTGCTCTTGATTaGTTGCTGGCCTTGATCAAC +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSAALD*LLALIN
Trigger: GTTGATCAAGGCCAGCAACAAATCAAGAGCAGCTGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACGATCGTTAATTTTGTaGAGCTTGTCATCGATCTCA +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPRSLIL*SLSSIS
Trigger: TGAGATCGATGACAAGCTCAACAAAATTAACGATCG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACACCGGCAGCTCAAAATaGCCAGCTGATTGGAGTAAA +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNTGSSK*PADWSK
Trigger: TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAATTTTCAGTTCTTCAGTaGTTGGGTATCTTGCAGATG +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKFSVLQ*LGILQM
Trigger: CATCTGCAAGATACCCAACAACTGAAGAACTGAAAA...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS TCA 90 bp ATACGAAAGAAGGGTGATGGAGATGTGGCTATCTCCAATGGCAGATaGTTTATAATAGTTCTGACTTCTTGGGAATTACATCAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: IRKKGDGDVAISNGR*FIIVLTSWELHQAK
Trigger: CTTTGCTTGATGTAATTCCCAAGAAGTCAGAACTATTATAAATCATCTGCCATTGGAGATAGCCACATCTCCATCACCCTTCTTTCGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557005.1
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAAGGCATGTTCTATATaGATTCTACACTGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGKACSI*ILHWKV
Trigger: TACCTTCCAGTGTAGAATCAATATAGAACATGCCTT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAGGTTCACTTTAATGTaGCTGAACCAGTCATTAAAG +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGRFTLM*LNQSLK
Trigger: CTTTAATGACTGGTTCAGCAACATTAAAGTGAACCT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCCACAGCTGAATCCTaGTTTATTTCCCAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSTAES*FISQSS
Trigger: GGAAGACTGGGAAATAAACAAGGATTCAGCTGTGGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TCTTCACATGCTTCAGTACGCTGTCCACCTGCTTTATTTTACTGTTTCTTCCTTTTTCTTAAGGATGCTTaGAAGCTCCTCAAATTGTTC +
Preference number: 5 (lower is better)
Translates to: SSHASVRCPPALFYCFFLFLKDA*KLLKLF
Trigger: GAACAATTTGAGGAGCTTCAAAGCATCCTTAAGAAA...AAGGAAGAAACAGTAAAATAAAGCAGGTGGACAGCGTACTGAAGCATGTGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACATGCTTCCTGAACAATaGTTCCAGAGGATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNMLPEQ*FQRMRK
Trigger: CTTCCTCATCCTCTGGAACAATTGTTCAGGAAGCAT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAAAATCTTTCTGTTCCATaGGTTTTAACTCCAGAACCT +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKNLSVP*VLTPEP
Trigger: AGGTTCTGGAGTTAAAACCAATGGAACAGAAAGATT...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATTCATGATGCAGATATaGCCACTTATCTCCATTTTG +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPFMMQI*PLISIL
Trigger: CAAAATGGAGATAAGTGGCAATATCTGCATCATGAA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AGAACATTTTGGTGTATAACCGGCAGCTCAAAATTGCCAGCTGATTGGAGTAAACACTTCATCATAGAGTaGATCATAAATCTTCCACTC +
Preference number: 5 (lower is better)
Translates to: RTFWCITGSSKLPADWSKHFIIE*IINLPL
Trigger: GAGTGGAAGATTTATGATCAACTCTATGATGAAGTG...TTTACTCCAATCAGCTGGCAATTTTGAGCTGCCGGTTATACACCAAAATGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGAAGTACCAGAATCGGATaGTCATCATATTCACTTCAT +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGSTRIG*SSYSLH
Trigger: ATGAAGTGAATATGATGACAATCCGATTCTGGTACT...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp GAACCATTTCTAGGGTGGAATGTCCTCGCTTGCTTCTATAATATATGTGATGGACAAACTCAAATTCATTaGCTTTCACAAGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: EPFLGWNVLACFYNICDGQTQIH*LSQAAS
Trigger: AGATGCTGCTTGTGAAAGCAAATGAATTTGAGTTTG...TCCATCACATATATTATAGAAGCAAGCGAGGACATTCCACCCTAGAAATGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCACAAACTCAAATTCATTaGCTTTCACAAGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPQTQIH*LSQAAS
Trigger: AGATGCTGCTTGTGAAAGCAAATGAATTTGAGTTTG...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACACTGAACAGAACATTTaGGTGTATAACCGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNTEQNI*VYNRQL
Trigger: GAGCTGCCGGTTATACACCAAAATGTTCTGTTCAGT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000458046.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp CAAACAAACCAGAATTCACAAAGTGCTTGGCTCTTCAGGAAACTGACATTTCCATCCAAATTCTATGTGTaGTTCAAAACATCTGAGCAC +
Preference number: 5 (lower is better)
Translates to: QTNQNSQSAWLFRKLTFPSKFYV*FKTSEH
Trigger: GTGCTCAGATGTTTTGAACAACACATAGAATTTGGA...TGGAAATGTCAGTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS TCA 90 bp TATCTGAAGAACAACTGGATTCATTTCATATTAACAGTGAAGAAATaGGATGGGCCCCTTTCCTTTGAAGGGTATCTTGCTAGGAATACA +
Preference number: 5 (lower is better)
Translates to: YLKNNWIHFILTVKK*DGPLSFEGYLARNT
Trigger: TGTATTCCTAGCAAGATACCCTTCAAAGGAAAGGGGCCCATCTCATTTCTTCACTGTTAATATGAAATGAATCCAGTTGTTCTTCAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554928.1
CDS TCA 90 bp TTACTATACCCACAGAAAAGGCCTAGCAACATGGCACCAAGTCCATaGTTACTGCTAAAACAAGAGATACAACATGTATTATTCTTACAG +
Preference number: 5 (lower is better)
Translates to: LLYPQKRPSNMAPSP*LLLKQEIQHVLFLQ
Trigger: CTGTAAGAATAATACATGTTGTATCTCTTGTTTTAGCAGTAATCATGGACTTGGTGCCATGTTGCTAGGCCTTTTCTGTGGGTATAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS CCA 90 bp CGGCAATTTCTCCATTTGAAGCTGGTGAAGTTTTTCTTGAATATCTaGAAGTTGAGTTATGAGCATTGTCCATTTTTGTTCAAACTGTGC +
Preference number: 5 (lower is better)
Translates to: RQFLHLKLVKFFLNI*KLSYEHCPFLFKLC
Trigger: GCACAGTTTGAACAAAAATGGACAATGCTCATAACTCAACTTCCAGATATTCAAGAAAAACTTCACCAGCTTCAAATGGAGAAATTGCCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTTCATTTCCTCCAATTaGTTAGGTGGTACCAATGGC +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNFISSN*LGGTNG
Trigger: GCCATTGGTACCACCTAACAAATTGGAGGAAATGAA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCAAAGAGTTGTTCAATaGGGCCACAGATTCAAACTG +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNQRVVQ*GHRFKL
Trigger: CAGTTTGAATCTGTGGCCCAATTGAACAACTCTTTG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGCTGCCTCTTTTGTTTaGGAAATTTCAGGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNAASFV*EISGSS
Trigger: AGAACTCCCTGAAATTTCCAAAACAAAAGAGGCAGC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGAAGGAATGTCTTTCTaGGATTTCAGTCTGCACCAA +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNEGMSF*DFSLHQ
Trigger: TTGGTGCAGACTGAAATCCAAGAAAGACATTCCTTC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGTCCGCCTTCATAGTTaGAAGTTCTTTCAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNVRLHS*KFFQVL
Trigger: CAGAACTTGAAAGAACTTCAAACTATGAAGGCGGAC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCATTTGCCATCTTGCTaGCACTTTAGAGCATTTCTT +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNHLPSC*HFRAFL
Trigger: AAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAATG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTCTCTCAGATTGTCTTaGTTGGATCTATGCTTCACA +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSLRLS*LDLCFT
Trigger: TGTGAAGCATAGATCCAACAAAGACAATCTGAGAGA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCCTGAATTTGTTGTTTaGCAGGTGGTGTTCAAGAAT +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNPEFVV*QVVFKN
Trigger: ATTCTTGAACACCACCTGCAAAACAACAAATTCAGG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACGTTGAGCGTTTTGATTaGAGAATGCTGTTGAGACAA +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNVERFD*RMLLRQ
Trigger: TTGTCTCAACAGCATTCTCAAATCAAAACGCTCAAC...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp TTGTATTTCAGTATAATATTCTGCATTGCGTGTAGATCAAATGGGTGTAACTCCGCCCCAGTTTCTGTTTaGTTAAGACATTCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: LYFSIIFCIACRSNGCNSAPVSV*LRHSVC
Trigger: ACAAACAGAATGTCTTAACAAAACAGAAACTGGGGC...GGAGTTACACCCATTTGATCTACACGCAATGCAGAATATTATACTGAAATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCAACGATCGTTAATTTaGTTGAGCTTGTCATCGATC +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNQRSLI*LSLSSI
Trigger: GATCGATGACAAGCTCAACAAAATTAACGATCGTTG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS TCA 90 bp AACAAGAGATACAACATGTATTATTCTTACAGGGTCACACTCAGTTaGGACACTTGCTTTTACTTCAGATTTCATATGAAGCTTTTGCCT +
Preference number: 5 (lower is better)
Translates to: NKRYNMYYSYRVTLS*DTCFYFRFHMKLLP
Trigger: AGGCAAAAGCTTCATATGAAATCTGAAGTAAAAGCAAGTGTCTCAACTGAGTGTGACCCTGTAAGAATAATACATGTTGTATCTCTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAGGTTCACTTTAATGTaGCTGAACCAGTCATTAAAG +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNRFTLM*LNQSLK
Trigger: CTTTAATGACTGGTTCAGCAACATTAAAGTGAACCT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCTATTTTTCTCCTCATaGCATATGATGGTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNLFFSS*HMMVSF
Trigger: AAAGCTCACCATCATATGCAATGAGGAGAAAAATAG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACTTTAACTTCTGTTACTaGTTCTGCCCAAAATGTCTC +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNFNFCY*FCPKCL
Trigger: GAGACATTTTGGGCAGAACAAGTAACAGAAGTTAAA...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACCACTTCATCATAGAGTaGATCATAAATCTTCCACTC +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNHFIIE*IINLPL
Trigger: GAGTGGAAGATTTATGATCAACTCTATGATGAAGTG...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS-3UTR CAA 90 bp AAGCAATATAAAAGAGCAGAGCTAGGTACTGAACAGAACATTTTGGTGTATAACAGTACCAGAATCGGATaGTCATCATATTCACTTCAT +
Preference number: 5 (lower is better)
Translates to: KQYKRAELGTEQNILVYNSTRIG*SSYSLH
Trigger: ATGAAGTGAATATGATGACAATCCGATTCTGGTACT...GTTATACACCAAAATGTTCTGTTCAGTACCTAGCTCTGCTCTTTTATATTGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
ENST00000555612.5
CDS CAA 72 bp GGCGCCCCGCTTGCCTGGCTCTCTGGATCGCGCCTTTaGCTCGCTCTCCCTCTCGCTTTTTCAGGTCCGGCC +
Preference number: 6 (lower is better)
Translates to: GAPLAWLSGSRL*LALPLAFSGPA
Trigger: GGCCGGACCTGAAAAAGCGAGAGGGAGAGCGAGCAAAAGGCGCGATCCAGAGAGCCAGGCAAGCGGGGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000555002.6
CDS CAA 72 bp CCCTGCCCAGCGTGCCCTCTTCACTGGTTCAGCATCTaGCACAGAGGCGGACGCAGCCCTCTCCAAGGCTCC +
Preference number: 6 (lower is better)
Translates to: PCPACPLHWFSI*HRGGRSPLQGS
Trigger: GGAGCCTTGGAGAGGGCTGCGTCCGCCTCTGTGCAAGATGCTGAACCAGTGAAGAGGGCACGCTGGGCAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553801.1
ENST00000555241.5
CDS CAA 90 bp GTGCAGGGGGCCCGGGAGGAGCATGTGGGTGCTGGACTCTGCGGGTaGTGGGAGTCGATCCAGGACACTGGAATTTTGGAGAAAGGCTTC +
Preference number: 6 (lower is better)
Translates to: VQGAREEHVGAGLCG*WESIQDTGILEKGF
Trigger: GAAGCCTTTCTCCAAAATTCCAGTGTCCTGGATCGACTCCCACAACCCGCAGAGTCCAGCACCCACATGCTCCTCCCGGGCCCCCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 72 bp TGCTCTGAACTTTGCTCGGGGAGCTGGCACGGATGTTaGAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAA +
Preference number: 6 (lower is better)
Translates to: CSELCSGSWHGC*RRLVPRVYLVE
Trigger: TTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGTTCAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358025.7
ENST00000441438.2
ENST00000555002.6
CDS CCA 72 bp GGACCCGTGTGGCCAGTGGAAGCACAGCTGCACAAGTaGTCCCAAGGCCAAGTGACGGTTCGCTGTATGCCA +
Preference number: 6 (lower is better)
Translates to: GPVWPVEAQLHK*SQGQVTVRCMP
Trigger: TGGCATACAGCGAACCGTCACTTGGCCTTGGGACCACTTGTGCAGCTGTGCTTCCACTGGCCACACGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS CCA 72 bp TCTTGCAAAGCTGTCTCAGCAGCTGGGGGCAGGCTGTaGTTTAGGCAGCCCTTGCCAGAGGTGAGGGGAAGC +
Preference number: 6 (lower is better)
Translates to: SCKAVSAAGGRL*FRQPLPEVRGS
Trigger: GCTTCCCCTCACCTCTGGCAAGGGCTGCCTAAACCACAGCCTGCCCCCAGCTGCTGAGACAGCTTTGCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS CAA 72 bp GCCCGGGAGGAGCATGTGGGTGCTGGACTCTGCGGGTaGTGGGAGTCGATCCAGGACACTGGAATTTTGGAG +
Preference number: 6 (lower is better)
Translates to: AREEHVGAGLCG*WESIQDTGILE
Trigger: CTCCAAAATTCCAGTGTCCTGGATCGACTCCCACAACCCGCAGAGTCCAGCACCCACATGCTCCTCCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CAA 90 bp GAACTGCTGGGTAAAGAAACTTTGCTCGGGGAGCTGGCACGGATGTaGCAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAAGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: ELLGKETLLGELARM*QEAGPPSLPRRSWA
Trigger: TGCCCAGCTTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGTTTCTTTACCCAGCAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS TCA 72 bp GTCACTTTCCAGGGTGCTGGGAACCCAGCTGTTACCTaGCAGTGCGCTGTAGTATGGGCCCTCCTCGTCCTC +
Preference number: 6 (lower is better)
Translates to: VTFQGAGNPAVT*QCAVVWALLVL
Trigger: GAGGACGAGGAGGGCCCATACTACAGCGCACTGTCAGGTAACAGCTGGGTTCCCAGCACCCTGGAAAGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557307.1
CDS GCA 72 bp ACATGGGCGTTCAGCCCATCAACGTCACCCTTCCTCTaGCGAACACCCTGGACAGCATTCTGCCACCGATCC +
Preference number: 6 (lower is better)
Translates to: TWAFSPSTSPFL*RTPWTAFCHRS
Trigger: GGATCGGTGGCAGAATGCTGTCCAGGGTGTTCGGCAGAGGAAGGGTGACGTTGATGGGCTGAACGCCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS GCA 72 bp CCCAAGCGACCTGCTGCCAGGGGTTCATCCCCAAACTaGAATGGCAGCAGAGGGCCTAATTCACCAGTCCTG +
Preference number: 6 (lower is better)
Translates to: PKRPAARGSSPN*NGSRGPNSPVL
Trigger: CAGGACTGGTGAATTAGGCCCTCTGCTGCCATTGCAGTTTGGGGATGAACCCCTGGCAGCAGGTCGCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS GCA 72 bp AGGACGCCCTCCTTCCCTTCTACATCCCAAGCGACCTaGTGCCAGGGGTTCATCCCCAAACTGCAATGGCAG +
Preference number: 6 (lower is better)
Translates to: RTPSFPSTSQAT*CQGFIPKLQWQ
Trigger: CTGCCATTGCAGTTTGGGGATGAACCCCTGGCAGCAGGTCGCTTGGGATGTAGAAGGGAAGGAGGGCGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS GCA 72 bp GGCCTGCATCACATGGGAGGGGTCAGAGCCAAAGCATaGAGAGTGCCAGGACGCCCTCCTTCCCTTCTACAT +
Preference number: 6 (lower is better)
Translates to: GLHHMGGVRAKA*RVPGRPPSLLH
Trigger: ATGTAGAAGGGAAGGAGGGCGTCCTGGCACTCTGCATGCTTTGGCTCTGACCCCTCCCATGTGATGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS CCA 72 bp TGTAGTTCTCACTGCTCTGAACTTTGCTCGGGGAGCTaGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTC +
Preference number: 6 (lower is better)
Translates to: CSSHCSELCSGS*HGCCRRLVPRV
Trigger: GACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGTTCAGAGCAGTGAGAACTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358025.7
ENST00000441438.2
ENST00000555002.6
CDS CCA 72 bp CTGAACTGCTGGGTAAAGAAACTTTGCTCGGGGAGCTaGCACGGATGTTGCAGGAGGCTGGTCCCCCGAGTC +
Preference number: 6 (lower is better)
Translates to: LNCWVKKLCSGS*HGCCRRLVPRV
Trigger: GACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGTTTCTTTACCCAGCAGTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS CAA 72 bp GGTAAAGAAACTTTGCTCGGGGAGCTGGCACGGATGTaGCAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGA +
Preference number: 6 (lower is better)
Translates to: GKETLLGELARM*QEAGPPSLPRR
Trigger: TCGACGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGTTTCTTTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS CAA 90 bp CAACGGAGCACGACCAACATGATTTGCTGTGGGATGAGTGGCGTTTaGGAGCCAGGGTCTCGAGTGGTAGGGACACTGAGTGGCAAGGCC +
Preference number: 6 (lower is better)
Translates to: QRSTTNMICCGMSGV*EPGSRVVGTLSGKA
Trigger: GGCCTTGCCACTCAGTGTCCCTACCACTCGAGACCCTGGCTCCAAAACGCCACTCATCCCACAGCAAATCATGTTGGTCGTGCTCCGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS GCA 72 bp GTAAAGAAACTTTGCTCGGGGAGCTGGCACGGATGTTaGAGGAGGCTGGTCCCCCGAGTCTACCTCGTCGAA +
Preference number: 6 (lower is better)
Translates to: VKKLCSGSWHGC*RRLVPRVYLVE
Trigger: TTCGACGAGGTAGACTCGGGGGACCAGCCTCCTGCAACATCCGTGCCAGCTCCCCGAGCAAAGTTTCTTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS CCA 72 bp CCTGAAGCTCACTGCAGCGCTCCAGTGCCGTGGCCGTaGCCCGAATCCATTGCCGGTTCATATTTTGTAACG +
Preference number: 6 (lower is better)
Translates to: PEAHCSAPVPWP*PESIAGSYFVT
Trigger: CGTTACAAAATATGAACCGGCAATGGATTCGGGCCACGGCCACGGCACTGGAGCGCTGCAGTGAGCTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000556342.1
CDS CCA 72 bp AGCCCATCAACGTCACCCTTCCTCTGCCGAACACCCTaGACAGCATTCTGCCACCGATCCGTCAGCTTTGAG +
Preference number: 6 (lower is better)
Translates to: SPSTSPFLCRTP*TAFCHRSVSFE
Trigger: CTCAAAGCTGACGGATCGGTGGCAGAATGCTGTCCAGGGTGTTCGGCAGAGGAAGGGTGACGTTGATGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CCA 72 bp TACTCTGTCCCTGTGGTCTGTCTGGTCCCCAGGTCATaGCTGTCCCTTACCCCATCTGTTGGGCTGACTTGG +
Preference number: 6 (lower is better)
Translates to: YSVPVVCLVPRS*LSLTPSVGLTW
Trigger: CCAAGTCAGCCCAACAGATGGGGTAAGGGACAGCCATGACCTGGGGACCAGACAGACCACAGGGACAGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS CAA 72 bp ACGTCACCTCTGAGCCACCACCTGGTCCTCCCAGCCTaGCCTATGTCCTACATGGCAAGTTCACAGCACCTG +
Preference number: 6 (lower is better)
Translates to: TSPLSHHLVLPA*PMSYMASSQHL
Trigger: CAGGTGCTGTGAACTTGCCATGTAGGACATAGGCAAGGCTGGGAGGACCAGGTGGTGGCTCAGAGGTGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS CAA 90 bp AAAGCTGTCTCAGCAGCTGGGGGCAGGCTGTGGTTTAGGCAGCCCTaGCCAGAGGTGAGGGGAAGCTGGCTACTTAGAGGAAGTCATTTC +
Preference number: 6 (lower is better)
Translates to: KAVSAAGGRLWFRQP*PEVRGSWLLRGSHF
Trigger: GAAATGACTTCCTCTAAGTAGCCAGCTTCCCCTCACCTCTGGCAAGGGCTGCCTAAACCACAGCCTGCCCCCAGCTGCTGAGACAGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS TCA 72 bp GGTGTGGTGCCCTCCACACTCATAGCAACAATCACGTaGCCTGGTGCCACAGGTTTCCAAGCAGCCGATCTG +
Preference number: 6 (lower is better)
Translates to: GVVPSTLIATIT*PGATGFQAADL
Trigger: CAGATCGGCTGCTTGGAAACCTGTGGCACCAGGTCACGTGATTGTTGCTATGAGTGTGGAGGGCACCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673797.1
ENST00000673869.1
CDS GCA 72 bp TTTAATGTTTCCGGCTCAACTGCCACGTTGGCTTGTTaGAGCCACAGCTCCAGCTCGGCCACCTGGGTCTTG +
Preference number: 6 (lower is better)
Translates to: FNVSGSTATLAC*SHSSSSATWVL
Trigger: CAAGACCCAGGTGGCCGAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCAGTTGAGCCGGAAACATTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553308.1
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
ENST00000673869.1
CDS GCA 72 bp GAGGTGATATCGAGTCCCCCTGATCCAGCTATTTGCTaGCTAGACGTCACCTCTGAGCCACCACCTGGTCCT +
Preference number: 6 (lower is better)
Translates to: EVISSPPDPAIC*LDVTSEPPPGP
Trigger: AGGACCAGGTGGTGGCTCAGAGGTGACGTCTAGGCAGCAAATAGCTGGATCAGGGGGACTCGATATCACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS CCA 72 bp CGGGAGGAGCATGTGGGTGCTGGACTCTGCGGGTTGTaGGAGTCGATCCAGGACACTGGAATTTTGGAGAAA +
Preference number: 6 (lower is better)
Translates to: REEHVGAGLCGL*ESIQDTGILEK
Trigger: TTTCTCCAAAATTCCAGTGTCCTGGATCGACTCCCACAACCCGCAGAGTCCAGCACCCACATGCTCCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CCA 72 bp CAATTCCCTGAAGCTCACTGCAGCGCTCCAGTGCCGTaGCCGTGGCCCGAATCCATTGCCGGTTCATATTTT +
Preference number: 6 (lower is better)
Translates to: QFPEAHCSAPVP*PWPESIAGSYF
Trigger: AAAATATGAACCGGCAATGGATTCGGGCCACGGCCACGGCACTGGAGCGCTGCAGTGAGCTTCAGGGAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000556342.1
CDS CCA 72 bp CTGAAGCGCTCCTGGCCCTTCACTGCAGATAGCAGGTaGCTGGTGTCAGTGAGGAAGCGAAACAAGTTCTCC +
Preference number: 6 (lower is better)
Translates to: LKRSWPFTADSR*LVSVRKRNKFS
Trigger: GGAGAACTTGTTTCGCTTCCTCACTGACACCAGCCACCTGCTATCTGCAGTGAAGGGCCAGGAGCGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS CCA 72 bp GAGAGGGGGTTGGCATCGAGACGGCTCTGGCTTGGATaGGGTTTTGTAAGGAGCACGCAGTTATGGGTGAGT +
Preference number: 6 (lower is better)
Translates to: ERGLASRRLWLG*GFVRSTQLWVS
Trigger: ACTCACCCATAACTGCGTGCTCCTTACAAAACCCCATCCAAGCCAGAGCCGTCTCGATGCCAACCCCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS CCA 72 bp ACGGAGCACGACCAACATGATTTGCTGTGGGATGAGTaGCGTTTTGGAGCCAGGGTCTCGAGTGGTAGGGAC +
Preference number: 6 (lower is better)
Translates to: TEHDQHDLLWDE*RFGARVSSGRD
Trigger: GTCCCTACCACTCGAGACCCTGGCTCCAAAACGCCACTCATCCCACAGCAAATCATGTTGGTCGTGCTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS CCA 72 bp TGGTTTAGGCAGCCCTTGCCAGAGGTGAGGGGAAGCTaGCTACTTAGAGGAAGTCATTTCAGCAGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: WFRQPLPEVRGS*LLRGSHFSSPQ
Trigger: CTGGGGGCTGCTGAAATGACTTCCTCTAAGTAGCCAGCTTCCCCTCACCTCTGGCAAGGGCTGCCTAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS CCA 72 bp GGTGCCCTCCACACTCATAGCAACAATCACGTGACCTaGTGCCACAGGTTTCCAAGCAGCCGATCTGCGAGT +
Preference number: 6 (lower is better)
Translates to: GALHTHSNNHVT*CHRFPSSRSAS
Trigger: ACTCGCAGATCGGCTGCTTGGAAACCTGTGGCACCAGGTCACGTGATTGTTGCTATGAGTGTGGAGGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673797.1
ENST00000673869.1
CDS CAA 72 bp ATGTCTGCGTTTAATGTTTCCGGCTCAACTGCCACGTaGGCTTGTTGCAGCCACAGCTCCAGCTCGGCCACC +
Preference number: 6 (lower is better)
Translates to: MSAFNVSGSTAT*ACCSHSSSSAT
Trigger: GGTGGCCGAGCTGGAGCTGTGGCTGCAACAAGCCAACGTGGCAGTTGAGCCGGAAACATTAAACGCAGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553308.1
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
ENST00000673869.1
CDS TCA 72 bp TGGAAGCACAGCTGCACAAGTGGTCCCAAGGCCAAGTaGCGGTTCGCTGTATGCCACGTGGCCACTGAAAAA +
Preference number: 6 (lower is better)
Translates to: WKHSCTSGPKAK*RFAVCHVATEK
Trigger: TTTTTCAGTGGCCACGTGGCATACAGCGAACCGTCACTTGGCCTTGGGACCACTTGTGCAGCTGTGCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS GCA 72 bp ACGGTGCCACTGGCGGTTCATCTCCCCCAGGTGCTCTaGAAACTCCGTTCTTTCATAGCGCTTGCTTTCTAC +
Preference number: 6 (lower is better)
Translates to: TVPLAVHLPQVL*KLRSFIALAFY
Trigger: GTAGAAAGCAAGCGCTATGAAAGAACGGAGTTTGCAGAGCACCTGGGGGAGATGAACCGCCAGTGGCACCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 72 bp AACGAGGTGATATCGAGTCCCCCTGATCCAGCTATTTaGTGCCTAGACGTCACCTCTGAGCCACCACCTGGT +
Preference number: 6 (lower is better)
Translates to: NEVISSPPDPAI*CLDVTSEPPPG
Trigger: ACCAGGTGGTGGCTCAGAGGTGACGTCTAGGCAGCAAATAGCTGGATCAGGGGGACTCGATATCACCTCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS GCA 72 bp GCCCTCCACACTCATAGCAACAATCACGTGACCTGGTaGCACAGGTTTCCAAGCAGCCGATCTGCGAGTAAG +
Preference number: 6 (lower is better)
Translates to: ALHTHSNNHVTW*HRFPSSRSASK
Trigger: CTTACTCGCAGATCGGCTGCTTGGAAACCTGTGGCACCAGGTCACGTGATTGTTGCTATGAGTGTGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673797.1
ENST00000673869.1
CDS CCA 72 bp TCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTaGCCATCCGAAATGGATTTACCAGAAGACGCTTTC +
Preference number: 6 (lower is better)
Translates to: SGQEGLSGTCHE*PSEMDLPEDAF
Trigger: GAAAGCGTCTTCTGGTAAATCCATTTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358025.7
ENST00000458046.6
ENST00000555002.6
CDS CCA 72 bp GGGTACACAACGGAGCACGACCAACATGATTTGCTGTaGGATGAGTGGCGTTTTGGAGCCAGGGTCTCGAGT +
Preference number: 6 (lower is better)
Translates to: GYTTEHDQHDLL*DEWRFGARVSS
Trigger: ACTCGAGACCCTGGCTCCAAAACGCCACTCATCCCACAGCAAATCATGTTGGTCGTGCTCCGTTGTGTACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS CCA 72 bp ACCACCTGGTCCTCCCAGCCTTGCCTATGTCCTACATaGCAAGTTCACAGCACCTGTCCTGACTACTCTGTC +
Preference number: 6 (lower is better)
Translates to: TTWSSQPCLCPT*QVHSTCPDYSV
Trigger: GACAGAGTAGTCAGGACAGGTGCTGTGAACTTGCCATGTAGGACATAGGCAAGGCTGGGAGGACCAGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS CCA 72 bp CTTGCCTCCCCAACTGATAAAGTCCAGCCAAAGCTGTaGTGGCTTGGAGAGAGGTGGGGTCTCTGGAGTCTT +
Preference number: 6 (lower is better)
Translates to: LASPTDKVQPKL*WLGERWGLWSL
Trigger: AAGACTCCAGAGACCCCACCTCTCTCCAAGCCACCACAGCTTTGGCTGGACTTTATCAGTTGGGGAGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS CAA 90 bp GTGCCTTCACTAGATGGGTACACAACGGAGCACGACCAACATGATTaGCTGTGGGATGAGTGGCGTTTTGGAGCCAGGGTCTCGAGTGGT +
Preference number: 6 (lower is better)
Translates to: VPSLDGYTTEHDQHD*LWDEWRFGARVSSG
Trigger: ACCACTCGAGACCCTGGCTCCAAAACGCCACTCATCCCACAGCAAATCATGTTGGTCGTGCTCCGTTGTGTACCCATCTAGTGAAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS GCA 72 bp ATAGCCTGGCACCCTACCAGCTGCTGTTCCAGCACCTaGTGCATGTCTGCGTTTAATGTTTCCGGCTCAACT +
Preference number: 6 (lower is better)
Translates to: IAWHPTSCCSST*CMSAFNVSGST
Trigger: AGTTGAGCCGGAAACATTAAACGCAGACATGCAGCAGGTGCTGGAACAGCAGCTGGTAGGGTGCCAGGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
ENST00000673869.1
CDS GCA 72 bp AACTGCGGTTGTAATCGAGGCCAGCTTTCAGGGACTTaGTTCTACAGACAGCTGCAGCCTGAGTGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: NCGCNRGQLSGT*FYRQLQPECAP
Trigger: TGGAGCACACTCAGGCTGCAGCTGTCTGTAGAAGCAAGTCCCTGAAAGCTGGCCTCGATTACAACCGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
CDS GCA 72 bp GAGCTGGAGCAGACTCTGGGCCTTCTGCAACTGGTCTaGAATGGCTTGGTTCACCTGAGTCCACCTTTTATG +
Preference number: 6 (lower is better)
Translates to: ELEQTLGLLQLV*NGLVHLSPPFM
Trigger: CATAAAAGGTGGACTCAGGTGAACCAAGCCATTGCAGACCAGTTGCAGAAGGCCCAGAGTCTGCTCCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS GCA 72 bp TCCTCCTCGCCTTCTGTAGTTCTCACTGCTCTGAACTaGTGGGTAAAGAAACTTTGCTCGGGGAGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: SSSPSVVLTALN*WVKKLCSGSWH
Trigger: GTGCCAGCTCCCCGAGCAAAGTTTCTTTACCCAGCAGTTCAGAGCAGTGAGAACTACAGAAGGCGAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS GCA 72 bp CATTCAGGACTCGCGGGCCTTCTTTGCCACCATCCGTaGCTGGAGGTAATAGTAGCTTTCCCTAGAATGAGC +
Preference number: 6 (lower is better)
Translates to: HSGLAGLLCHHP*LEVIVAFPRMS
Trigger: GCTCATTCTAGGGAAAGCTACTATTACCTCCAGGCACGGATGGTGGCAAAGAAGGCCCGCGAGTCCTGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554928.1
CDS CCA 72 bp AAGGTAAATGAAGCCTCTCCCCTTCATCTCTTAGTTTaGCCACTCGGCTCTCGGCGTTCTCCAGCTCCACTG +
Preference number: 6 (lower is better)
Translates to: KVNEASPLHLLV*PLGSRRSPAPL
Trigger: CAGTGGAGCTGGAGAACGCCGAGAGCCGAGTGGCCAAACTAAGAGATGAAGGGGAGAGGCTTCATTTACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
CDS CCA 72 bp TTCAGGGACAACCACTGCTCTTCCAGTTTTGCGATCTaGCCCTCTAATTCAGGACAGCTCACAGACGCCACC +
Preference number: 6 (lower is better)
Translates to: FRDNHCSSSFAI*PSNSGQLTDAT
Trigger: GGTGGCGTCTGTGAGCTGTCCTGAATTAGAGGGCCAGATCGCAAAACTGGAAGAGCAGTGGTTGTCCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
CDS CCA 72 bp GAGGGGCAGAGACCTTTGAGTTTGCCGATAACCTCCTaGAGTTTCTCCCAACTCCCTTCACTGCTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: EGQRPLSLPITS*SFSQLPSLLSA
Trigger: AGCTGAGAGCAGTGAAGGGAGTTGGGAGAAACTCCAGGAGGTTATCGGCAAACTCAAAGGTCTCTGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS CCA 72 bp TCGGGACAGGAAGGGCTGTCGGGAACATGCCACGAGTaGCCATCCGAAATGGATTTACCTGAAACGAAAGAC +
Preference number: 6 (lower is better)
Translates to: SGQEGLSGTCHE*PSEMDLPETKD
Trigger: GTCTTTCGTTTCAGGTAAATCCATTTCGGATGGCCACTCGTGGCATGTTCCCGACAGCCCTTCCTGTCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS CAA 72 bp CCGCTTCAGTATGAGGGGTTCACCCAGCCGTATACATaGAACCAGCCCATGCGGGTAGATTATGGGGCATCT +
Preference number: 6 (lower is better)
Translates to: PLQYEGFTQPYT*NQPMRVDYGAS
Trigger: AGATGCCCCATAATCTACCCGCATGGGCTGGTTCAATGTATACGGCTGGGTGAACCCCTCATACTGAAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS CAA 72 bp ACGACCAACATGATTTGCTGTGGGATGAGTGGCGTTTaGGAGCCAGGGTCTCGAGTGGTAGGGACACTGAGT +
Preference number: 6 (lower is better)
Translates to: TTNMICCGMSGV*EPGSRVVGTLS
Trigger: ACTCAGTGTCCCTACCACTCGAGACCCTGGCTCCAAAACGCCACTCATCCCACAGCAAATCATGTTGGTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS CAA 72 bp CTAGATGGGTACACAACGGAGCACGACCAACATGATTaGCTGTGGGATGAGTGGCGTTTTGGAGCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: LDGYTTEHDQHD*LWDEWRFGARV
Trigger: GACCCTGGCTCCAAAACGCCACTCATCCCACAGCAAATCATGTTGGTCGTGCTCCGTTGTGTACCCATCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS CAA 90 bp GTCAGTGAGGAAGCGAAACAAGTTCTCCACAGAAGTAGTGAAATCTaGCCACTGCCTCACCAGCCCATCAACGTCACCCTTCCTCTGCCG +
Preference number: 6 (lower is better)
Translates to: VSEEAKQVLHRSSEI*PLPHQPINVTLPLP
Trigger: CGGCAGAGGAAGGGTGACGTTGATGGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTCTGTGGAGAACTTGTTTCGCTTCCTCACTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS CAA 90 bp CTTCTTCACCCGCTTCAGTATGAGGGGTTCACCCAGCCGTATACATaGAACCAGCCCATGCGGGTAGATTATGGGGCATCTCTGTCCGTT +
Preference number: 6 (lower is better)
Translates to: LLHPLQYEGFTQPYT*NQPMRVDYGASLSV
Trigger: AACGGACAGAGATGCCCCATAATCTACCCGCATGGGCTGGTTCAATGTATACGGCTGGGTGAACCCCTCATACTGAAGCGGGTGAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS CAA 90 bp CAGGTCATGGCTGTCCCTTACCCCATCTGTTGGGCTGACTTGGCCTaGGTTTTCCAAATGGGCTTTGTACCCACCTTTATGTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: QVMAVPYPICWADLA*VFQMGFVPTFMSCR
Trigger: CCTGCAGGACATAAAGGTGGGTACAAAGCCCATTTGGAAAACCAAGGCCAAGTCAGCCCAACAGATGGGGTAAGGGACAGCCATGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS TCA 72 bp TGGAGAGAAAGCAACTCTCCTCGGTACCATGCCCACTaGCAATGGTCTCACACTCCCATCTCTCTGGAACCT +
Preference number: 6 (lower is better)
Translates to: WRESNSPRYHAH*QWSHTPISLEP
Trigger: AGGTTCCAGAGAGATGGGAGTGTGAGACCATTGTCAGTGGGCATGGTACCGAGGAGAGTTGCTTTCTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS GCA 72 bp CACTCGGCTCTCGGCGTTCTCCAGCTCCACTGTATATaGATCTGCTTTCTGAAGCTGTTCAGCAACACTCTG +
Preference number: 6 (lower is better)
Translates to: HSALGVLQLHCI*ICFLKLFSNTL
Trigger: CAGAGTGTTGCTGAACAGCTTCAGAAAGCAGATGCATATACAGTGGAGCTGGAGAACGCCGAGAGCCGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000555002.6
ENST00000673797.1
CDS GCA 72 bp TCCAGACATGCTGATGTTTGCGAGCTGTTGAAACTTTaGTTCCTGCTGCTTCAGCCTTGCGGCAGCTTCACC +
Preference number: 6 (lower is better)
Translates to: SRHADVCELLKL*FLLLQPCGSFT
Trigger: GGTGAAGCTGCCGCAAGGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACATCAGCATGTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS GCA 72 bp CACTCGGCTCTCGGCGTTCTCCAGCTCCACTGTATATaGATCTGCTTTCTGGTAACTGCGGTTGTAATCGAG +
Preference number: 6 (lower is better)
Translates to: HSALGVLQLHCI*ICFLVTAVVIE
Trigger: CTCGATTACAACCGCAGTTACCAGAAAGCAGATGCATATACAGTGGAGCTGGAGAACGCCGAGAGCCGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS GCA 72 bp GTTTTCCAAATGGGCTTTGTACCCACCTTTATGTCCTaGAGGGCTGGGGGCAGGATCTCTGCCAGGTTGTTT +
Preference number: 6 (lower is better)
Translates to: VFQMGFVPTFMS*RAGGRISARLF
Trigger: AAACAACCTGGCAGAGATCCTGCCCCCAGCCCTGCAGGACATAAAGGTGGGTACAAAGCCCATTTGGAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS GCA 72 bp GGGTACCACAGGCCTTTCATACGCCCCCGTGAACTCTaGCTTTCATTTCAGGATATCCTCCACTACGTTCCA +
Preference number: 6 (lower is better)
Translates to: GYHRPFIRPREL*LSFQDILHYVP
Trigger: TGGAACGTAGTGGAGGATATCCTGAAATGAAAGGCAGAGTTCACGGGGGCGTATGAAAGGCCTGTGGTACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557005.1
CDS GCA 72 bp TCATTACATAGCAGCTGGAGTACATCAGCAATGTCTTaGAAAGCTGTCTCAGCAGCTGGGGGCAGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: SLHSSWSTSAMS*KAVSAAGGRLW
Trigger: CCACAGCCTGCCCCCAGCTGCTGAGACAGCTTTGCAAGACATTGCTGATGTACTCCAGCTGCTATGTAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS CCA 72 bp ACCAGTTCCACCATGCCTTGCAACAAAGCATCTTGCTaGCTCTCAGTGACGAAAGGGCTGCTGAGTTCTGTG +
Preference number: 6 (lower is better)
Translates to: TSSTMPCNKASC*LSVTKGLLSSV
Trigger: CACAGAACTCAGCAGCCCTTTCGTCACTGAGAGCCAGCAAGATGCTTTGTTGCAAGGCATGGTGGAACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
CDS CCA 72 bp ATCTTTCTATTCAGCATTCCATGTACACGGTGCCACTaGCGGTTCATCTCCCCCAGGTGCTCTGCAAACTCC +
Preference number: 6 (lower is better)
Translates to: IFLFSIPCTRCH*RFISPRCSANS
Trigger: GGAGTTTGCAGAGCACCTGGGGGAGATGAACCGCCAGTGGCACCGTGTACATGGAATGCTGAATAGAAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CCA 72 bp GGCTGTACTCCCAGTGAAGTTAAGACTTACATAGGGTaGTTTATAAGGGGTGCTGGACGCAGGGGGAACAGG +
Preference number: 6 (lower is better)
Translates to: GCTPSEVKTYIG*FIRGAGRRGNR
Trigger: CCTGTTCCCCCTGCGTCCAGCACCCCTTATAAACCACCCTATGTAAGTCTTAACTTCACTGGGAGTACAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS CCA 72 bp TCATGGCTGTCCCTTACCCCATCTGTTGGGCTGACTTaGCCTTGGTTTTCCAAATGGGCTTTGTACCCACCT +
Preference number: 6 (lower is better)
Translates to: SWLSLTPSVGLT*PWFSKWALYPP
Trigger: AGGTGGGTACAAAGCCCATTTGGAAAACCAAGGCCAAGTCAGCCCAACAGATGGGGTAAGGGACAGCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS CAA 90 bp GATCTCTGCCAGGTTGTTTCCAGACATGCTGATGTTTGCGAGCTGTaGAAACTTTGCTTCCTGCTGCTTCAGCCTTGCGGCAGCTTCACC +
Preference number: 6 (lower is better)
Translates to: DLCQVVSRHADVCEL*KLCFLLLQPCGSFT
Trigger: GGTGAAGCTGCCGCAAGGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACATCAGCATGTCTGGAAACAACCTGGCAGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS CAA 90 bp CTTCTGAGCAACAGCCGCCGTCCTCCCATTCACTTTCTACTTCCTTaGCATGCTGAGACCCATCCACAGTTCAGTGAGGAAGCAATGGTG +
Preference number: 6 (lower is better)
Translates to: LLSNSRRPPIHFLLP*HAETHPQFSEEAMV
Trigger: CACCATTGCTTCCTCACTGAACTGTGGATGGGTCTCAGCATGCAAAGGAAGTAGAAAGTGAATGGGAGGACGGCGGCTGTTGCTCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556725.1
CDS CAA 90 bp TGCTTGAGAAGAGCTTGCAGCCTGTGGAGCTCATGGTCAATTTTCTaGTTCAGGGACAACCACTGCTCTTCCAGTTTTGCGATCTGGCCC +
Preference number: 6 (lower is better)
Translates to: CLRRACSLWSSWSIF*FRDNHCSSSFAIWP
Trigger: GGGCCAGATCGCAAAACTGGAAGAGCAGTGGTTGTCCCTGAACAAGAAAATTGACCATGAGCTCCACAGGCTGCAAGCTCTTCTCAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
CDS TCA 72 bp GGGGCAGGATCTCTGCCAGGTTGTTTCCAGACATGCTaGTGTTTGCGAGCTGTTGAAACTTTGCTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: GAGSLPGCFQTC*CLRAVETLLPA
Trigger: AGCAGGAAGCAAAGTTTCAACAGCTCGCAAACATCAGCATGTCTGGAAACAACCTGGCAGAGATCCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS GCA 72 bp CCTGTTCAGCTTGCAATGAAATATGGAGATCGTCGATaGCCCAGGAACCCTGTTCATCTTCGGTGGGAAGCT +
Preference number: 6 (lower is better)
Translates to: PVQLAMKYGDRR*PRNPVHLRWEA
Trigger: AGCTTCCCACCGAAGATGAACAGGGTTCCTGGGGCATCGACGATCTCCATATTTCATTGCAAGCTGAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS GCA 72 bp TCAATCTCTGTTAGCATAGCCTGGCACCCTACCAGCTaGTGTTCCAGCACCTGCTGCATGTCTGCGTTTAAT +
Preference number: 6 (lower is better)
Translates to: SISVSIAWHPTS*CSSTCCMSAFN
Trigger: ATTAAACGCAGACATGCAGCAGGTGCTGGAACAGCAGCTGGTAGGGTGCCAGGCTATGCTAACAGAGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
ENST00000673869.1
CDS GCA 72 bp TTCACCAGTTCCACCATGCCTTGCAACAAAGCATCTTaGTGGCTCTCAGTGACGAAAGGGCTGCTGAGTTCT +
Preference number: 6 (lower is better)
Translates to: FTSSTMPCNKAS*WLSVTKGLLSS
Trigger: AGAACTCAGCAGCCCTTTCGTCACTGAGAGCCAGCAAGATGCTTTGTTGCAAGGCATGGTGGAACTGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
CDS GCA 72 bp CTAATTCAGGACAGCTCACAGACGCCACCAACTGTTTaGCTTCGTTCAGAGTTTGGTAAAGCCGGGCGTGTT +
Preference number: 6 (lower is better)
Translates to: LIQDSSQTPPTV*LRSEFGKAGRV
Trigger: AACACGCCCGGCTTTACCAAACTCTGAACGAAGGCAAACAGTTGGTGGCGTCTGTGAGCTGTCCTGAATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
CDS GCA 72 bp TGTTGTATCTTTCTATTCAGCATTCCATGTACACGGTaGCACTGGCGGTTCATCTCCCCCAGGTGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: CCIFLFSIPCTR*HWRFISPRCSA
Trigger: TGCAGAGCACCTGGGGGAGATGAACCGCCAGTGGCACCGTGTACATGGAATGCTGAATAGAAAGATACAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 72 bp TCACCCTTCCTCTGCCGAACACCCTGGACAGCATTCTaGCACCGATCCGTCAGCTTTGAGAATTCTGTAATA +
Preference number: 6 (lower is better)
Translates to: SPFLCRTPWTAF*HRSVSFENSVI
Trigger: TATTACAGAATTCTCAAAGCTGACGGATCGGTGGCAGAATGCTGTCCAGGGTGTTCGGCAGAGGAAGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 72 bp AACAAGTTCTCCACAGAAGTAGTGAAATCTTGCCACTaGCTCACCAGCCCATCAACGTCACCCTTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: NKFSTEVVKSCH*LTSPSTSPFLC
Trigger: GCAGAGGAAGGGTGACGTTGATGGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTCTGTGGAGAACTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS CCA 72 bp TCAGTTTCAGGGAAAGCGCTTCAGCCTCATGTTGAGTaGCTCCATTATCTCCCAGGCCCTGATCTTTGCAAG +
Preference number: 6 (lower is better)
Translates to: SVSGKALQPHVE*LHYLPGPDLCK
Trigger: CTTGCAAAGATCAGGGCCTGGGAGATAATGGAGCCACTCAACATGAGGCTGAAGCGCTTTCCCTGAAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553455.1
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
ENST00000673869.1
CDS CAA 72 bp GCTGTCCCTTACCCCATCTGTTGGGCTGACTTGGCCTaGGTTTTCCAAATGGGCTTTGTACCCACCTTTATG +
Preference number: 6 (lower is better)
Translates to: AVPYPICWADLA*VFQMGFVPTFM
Trigger: CATAAAGGTGGGTACAAAGCCCATTTGGAAAACCAAGGCCAAGTCAGCCCAACAGATGGGGTAAGGGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS CAA 72 bp TGTGGTGGCTTGGAGAGAGGTGGGGTCTCTGGAGTCTaGTCCTTTGATGATGATAGTGATGCAGTTCCCCAA +
Preference number: 6 (lower is better)
Translates to: CGGLERGGVSGV*SFDDDSDAVPQ
Trigger: TTGGGGAACTGCATCACTATCATCATCAAAGGACAAGACTCCAGAGACCCCACCTCTCTCCAAGCCACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS CAA 90 bp GCACTTCACTGTTTTCAGTTTCAGGGAAAGCGCTTCAGCCTCATGTaGAGTGGCTCCATTATCTCCCAGGCCCTGATCTTTGCAAGTCTC +
Preference number: 6 (lower is better)
Translates to: ALHCFQFQGKRFSLM*SGSIISQALIFASL
Trigger: GAGACTTGCAAAGATCAGGGCCTGGGAGATAATGGAGCCACTCAACATGAGGCTGAAGCGCTTTCCCTGAAACTGAAAACAGTGAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553455.1
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
ENST00000673869.1
CDS CAA 90 bp ATGAGCAAGCTTTTCCTTCCCAATCTTCACCAGTTCCACCATGCCTaGCAACAAAGCATCTTGCTGGCTCTCAGTGACGAAAGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: MSKLFLPNLHQFHHA*QQSILLALSDERAA
Trigger: AGCAGCCCTTTCGTCACTGAGAGCCAGCAAGATGCTTTGTTGCAAGGCATGGTGGAACTGGTGAAGATTGGGAAGGAAAAGCTTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
CDS CAA 90 bp AGCCAAAGCTGTGGTGGCTTGGAGAGAGGTGGGGTCTCTGGAGTCTaGTCCTTTGATGATGATAGTGATGCAGTTCCCCAATTTGGGAAA +
Preference number: 6 (lower is better)
Translates to: SQSCGGLERGGVSGV*SFDDDSDAVPQFGK
Trigger: TTTCCCAAATTGGGGAACTGCATCACTATCATCATCAAAGGACAAGACTCCAGAGACCCCACCTCTCTCCAAGCCACCACAGCTTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS TCA 72 bp AAGTGTGCCTGGCCAACTGTGAGTTTATCCAGCACGTaGAGGCTTTCTTCTGGGTGTCTTCCTGTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: KCAWPTVSLSST*RLSSGCLPVQL
Trigger: AAGCTGAACAGGAAGACACCCAGAAGAAAGCCTTCACGTGCTGGATAAACTCACAGTTGGCCAGGCACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS TCA 72 bp AGTTCACCGGGGCTCTCTCTTTGCCCCAGTAACTGCTaGGCCCTCATCATATATGATTCAAGTTCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: SSPGLSLCPSNC*ALIIYDSSSFW
Trigger: CCAGAAGGAACTTGAATCATATATGATGAGGGCTCAGCAGTTACTGGGGCAAAGAGAGAGCCCCGGTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS TCA 72 bp TCAGGGCTGGATGCCTGGTTGCTTGCAGATGATTCCTaGGTTGTATCGTTATCATGTTGGCAATACTGGGGC +
Preference number: 6 (lower is better)
Translates to: SGLDAWLLADDS*VVSLSCWQYWG
Trigger: GCCCCAGTATTGCCAACATGATAACGATACAACTCAGGAATCATCTGCAAGCAACCAGGCATCCAGCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553455.1
ENST00000555002.6
ENST00000673797.1
ENST00000673869.1
CDS TCA 72 bp AGGTTGTTTCCAGACATGCTGATGTTTGCGAGCTGTTaGAACTTTGCTTCCTGCTGCTTCAGCCTTGCGGCA +
Preference number: 6 (lower is better)
Translates to: RLFPDMLMFASC*NFASCCFSLAA
Trigger: TGCCGCAAGGCTGAAGCAGCAGGAAGCAAAGTTTCAACAGCTCGCAAACATCAGCATGTCTGGAAACAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS TCA 72 bp GTAACACTAGAGAGAAAGCACAGACTTGGAACGAGGTaGTATCGAGTCCCCCTGATCCAGCTATTTGCTGCC +
Preference number: 6 (lower is better)
Translates to: VTLERKHRLGTR*YRVPLIQLFAA
Trigger: GGCAGCAAATAGCTGGATCAGGGGGACTCGATATCACCTCGTTCCAAGTCTGTGCTTTCTCTCTAGTGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS TCA 72 bp GAAGGGATAGCATTGGGAGATATACCTAATGCTAGATaGCGAGTTAGTGGGTACGGTGCACCAGCATGGCAC +
Preference number: 6 (lower is better)
Translates to: EGIALGDIPNAR*RVSGYGAPAWH
Trigger: GTGCCATGCTGGTGCACCGTACCCACTAACTCGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557060.1
CDS GCA 72 bp AAGCGAAACAAGTTCTCCACAGAAGTAGTGAAATCTTaGCACTGCCTCACCAGCCCATCAACGTCACCCTTC +
Preference number: 6 (lower is better)
Translates to: KRNKFSTEVVKS*HCLTSPSTSPF
Trigger: GAAGGGTGACGTTGATGGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTCTGTGGAGAACTTGTTTCGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS CCA 72 bp TCTATGTGTTGTTCAAAACATCTGAGCACACTGCTATaGAAAGGACCCGTGTGGCCAGTGGAAGCACAGCTG +
Preference number: 6 (lower is better)
Translates to: SMCCSKHLSTLL*KGPVWPVEAQL
Trigger: CAGCTGTGCTTCCACTGGCCACACGGGTCCTTTCCATAGCAGTGTGCTCAGATGTTTTGAACAACACATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS CCA 72 bp CATGAATCTGCCGCTCAAACCTCTTCAGTTCCTCTTTaGCACTCGTGTACAACACCTCTGAGGAATTTGGGC +
Preference number: 6 (lower is better)
Translates to: HESAAQTSSVPL*HSCTTPLRNLG
Trigger: GCCCAAATTCCTCAGAGGTGTTGTACACGAGTGCCAAAGAGGAACTGAAGAGGTTTGAGCGGCAGATTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS CCA 72 bp CTGTCCCTTACCCCATCTGTTGGGCTGACTTGGCCTTaGTTTTCCAAATGGGCTTTGTACCCACCTTTATGT +
Preference number: 6 (lower is better)
Translates to: LSLTPSVGLTWP*FSKWALYPPLC
Trigger: ACATAAAGGTGGGTACAAAGCCCATTTGGAAAACCAAGGCCAAGTCAGCCCAACAGATGGGGTAAGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS CCA 72 bp CTTCCACCTCTTCCTCGACTGCTGCCAGGTAAGACATaGAGCCTCTTCTGTTCAATTTATCCAAGATGCCCA +
Preference number: 6 (lower is better)
Translates to: LPPLPRLLPGKT*SLFCSIYPRCP
Trigger: TGGGCATCTTGGATAAATTGAACAGAAGAGGCTCCATGTCTTACCTGGCAGCAGTCGAGGAAGAGGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555323.1
CDS CAA 72 bp GGCTGGATGCCTGGTTGCTTGCAGATGATTCCTGAGTaGTATCGTTATCATGTTGGCAATACTGGGGCCACA +
Preference number: 6 (lower is better)
Translates to: GWMPGCLQMIPE*YRYHVGNTGAT
Trigger: TGTGGCCCCAGTATTGCCAACATGATAACGATACAACTCAGGAATCATCTGCAAGCAACCAGGCATCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553455.1
ENST00000555002.6
ENST00000673797.1
ENST00000673869.1
CDS CAA 72 bp AGAGCTTGCAGCCTGTGGAGCTCATGGTCAATTTTCTaGTTCAGGGACAACCACTGCTCTTCCAGTTTTGCG +
Preference number: 6 (lower is better)
Translates to: RACSLWSSWSIF*FRDNHCSSSFA
Trigger: CGCAAAACTGGAAGAGCAGTGGTTGTCCCTGAACAAGAAAATTGACCATGAGCTCCACAGGCTGCAAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
CDS CAA 72 bp GAAGCGAAACAAGTTCTCCACAGAAGTAGTGAAATCTaGCCACTGCCTCACCAGCCCATCAACGTCACCCTT +
Preference number: 6 (lower is better)
Translates to: EAKQVLHRSSEI*PLPHQPINVTL
Trigger: AAGGGTGACGTTGATGGGCTGGTGAGGCAGTGGCAAGATTTCACTACTTCTGTGGAGAACTTGTTTCGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS CAA 72 bp TTCTTTATTCTTCAGCTCATGGATCAGACTTCTGGTTaGGTAGAGGCTGAAGCGCTCCTGGCCCTTCACTGC +
Preference number: 6 (lower is better)
Translates to: FFILQLMDQTSG*VEAEALLALHC
Trigger: GCAGTGAAGGGCCAGGAGCGCTTCAGCCTCTACCAAACCAGAAGTCTGATCCATGAGCTGAAGAATAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS CAA 72 bp GCTTGGAGAGAGGTGGGGTCTCTGGAGTCTTGTCCTTaGATGATGATAGTGATGCAGTTCCCCAATTTGGGA +
Preference number: 6 (lower is better)
Translates to: AWREVGSLESCP*MMIVMQFPNLG
Trigger: TCCCAAATTGGGGAACTGCATCACTATCATCATCAAAGGACAAGACTCCAGAGACCCCACCTCTCTCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555612.5
CDS CAA 90 bp TTCTCTTCGATTATTTCAGCAACAGAGGGGCAGAGACCTTTGAGTTaGCCGATAACCTCCTGGAGTTTCTCCCAACTCCCTTCACTGCTC +
Preference number: 6 (lower is better)
Translates to: FSSIISATEGQRPLS*PITSWSFSQLPSLL
Trigger: GAGCAGTGAAGGGAGTTGGGAGAAACTCCAGGAGGTTATCGGCAAACTCAAAGGTCTCTGCCCCTCTGTTGCTGAAATAATCGAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS CAA 90 bp GTGGGAGTCGATCCAGGACACTGGAATTTTGGAGAAAGGCTTCTTTaGTTTTCTGCACATCATGCTGCAGCTCCTTTATGTCCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: VGVDPGHWNFGERLL*FSAHHAAAPLCPAG
Trigger: CCCTGCAGGACATAAAGGAGCTGCAGCATGATGTGCAGAAAACAAAAGAAGCCTTTCTCCAAAATTCCAGTGTCCTGGATCGACTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS TCA 72 bp TATCAGAGTCACGGCTTGAGAGTGATCCTGGGAGGCTaGCAAATCTTCATCCATAAGCTCTTCTACCTCCTG +
Preference number: 6 (lower is better)
Translates to: YQSHGLRVILGG*QIFIHKLFYLL
Trigger: CAGGAGGTAGAAGAGCTTATGGATGAAGATTTGTCAGCCTCCCAGGATCACTCTCAAGCCGTGACTCTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS TCA 72 bp ATGTCCTTGTCATGCTTCCAAAGTGAAGACCAAGACTaGGGCGATGGCTCTGCCTTCTCATCTCCATTATCG +
Preference number: 6 (lower is better)
Translates to: MSLSCFQSEDQD*GDGSAFSSPLS
Trigger: CGATAATGGAGATGAGAAGGCAGAGCCATCGCCTCAGTCTTGGTCTTCACTTTGGAAGCATGACAAGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553308.1
ENST00000555002.6
ENST00000555323.1
CDS TCA 72 bp GATTTTAGGGTACCACAGGCCTTTCATACGCCCCCGTaGACTCTGCCTTTCATTTCAGGATATCCTCCACTA +
Preference number: 6 (lower is better)
Translates to: DFRVPQAFHTPP*TLPFISGYPPL
Trigger: TAGTGGAGGATATCCTGAAATGAAAGGCAGAGTTCACGGGGGCGTATGAAAGGCCTGTGGTACCCTAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557005.1
CDS TCA 72 bp ACTGCAATGGCAGCAGAGGGCCTAATTCACCAGTCCTaGTGCCAGCTACAGAACAGGCTTTCAAGTTCATTA +
Preference number: 6 (lower is better)
Translates to: TAMAAEGLIHQS*CQLQNRLSSSL
Trigger: TAATGAACTTGAAAGCCTGTTCTGTAGCTGGCATCAGGACTGGTGAATTAGGCCCTCTGCTGCCATTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS GCA 72 bp GCTTGGAAAGCTCAGACTCAATTCGAGCCAACCAGGTaGGAAGGTTGCTCATGTTTTTGTCCAACTGCTGAA +
Preference number: 6 (lower is better)
Translates to: AWKAQTQFEPTR*EGCSCFCPTAE
Trigger: TTCAGCAGTTGGACAAAAACATGAGCAACCTTCGCACCTGGTTGGCTCGAATTGAGTCTGAGCTTTCCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 72 bp GCTTGGAAAGCTCAGACTCAATTCGAGCCAACCAGGTaGGAAGGTTGCTCATGTTTTTGTCCAACTGTGTTG +
Preference number: 6 (lower is better)
Translates to: AWKAQTQFEPTR*EGCSCFCPTVL
Trigger: CAACACAGTTGGACAAAAACATGAGCAACCTTCGCACCTGGTTGGCTCGAATTGAGTCTGAGCTTTCCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555241.5
CDS CCA 72 bp GCCGTATACATTGAACCAGCCCATGCGGGTAGATTATaGGGCATCTCTGTCCGTTTTTATCACCTCCCAATT +
Preference number: 6 (lower is better)
Translates to: AVYIEPAHAGRL*GISVRFYHLPI
Trigger: AATTGGGAGGTGATAAAAACGGACAGAGATGCCCCATAATCTACCCGCATGGGCTGGTTCAATGTATACGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS CAA 72 bp TGTTTTCAGTTTCAGGGAAAGCGCTTCAGCCTCATGTaGAGTGGCTCCATTATCTCCCAGGCCCTGATCTTT +
Preference number: 6 (lower is better)
Translates to: CFQFQGKRFSLM*SGSIISQALIF
Trigger: AAAGATCAGGGCCTGGGAGATAATGGAGCCACTCAACATGAGGCTGAAGCGCTTTCCCTGAAACTGAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553455.1
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
ENST00000673869.1
CDS CAA 72 bp TGGCATCTCAAGGTCTCCAATGATAACACCACAGGCTaGCTGTGTTCCATGCAGTACCAGAATCGGATTGTC +
Preference number: 6 (lower is better)
Translates to: WHLKVSNDNTTG*LCSMQYQNRIV
Trigger: GACAATCCGATTCTGGTACTGCATGGAACACAGCAAGCCTGTGGTGTTATCATTGGAGACCTTGAGATGCCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS CAA 72 bp ATTATTTCAGCAACAGAGGGGCAGAGACCTTTGAGTTaGCCGATAACCTCCTGGAGTTTCTCCCAACTCCCT +
Preference number: 6 (lower is better)
Translates to: IISATEGQRPLS*PITSWSFSQLP
Trigger: AGGGAGTTGGGAGAAACTCCAGGAGGTTATCGGCAAACTCAAAGGTCTCTGCCCCTCTGTTGCTGAAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS CAA 90 bp TGGCATTTCTCTTCGATTATTTCAGCAACAGAGGGGCAGAGACCTTaGAGTTTGCCGATAACCTCCTGGAGTTTCTCCCAACTCCCTTCA +
Preference number: 6 (lower is better)
Translates to: WHFSSIISATEGQRP*SLPITSWSFSQLPS
Trigger: TGAAGGGAGTTGGGAGAAACTCCAGGAGGTTATCGGCAAACTCAAAGGTCTCTGCCCCTCTGTTGCTGAAATAATCGAAGAGAAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS CAA 90 bp GCATTGTTCCTGAGCCCACAAAAGAAGGGCCTTTCTTGCAGACATTaGCCATCTTGCTTGCACTTTAGAGCATTTCTTAGCTGGAGGACT +
Preference number: 6 (lower is better)
Translates to: ALFLSPQKKGLSCRH*PSCLHFRAFLSWRT
Trigger: AGTCCTCCAGCTAAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAATGTCTGCAAGAAAGGCCCTTCTTTTGTGGGCTCAGGAACAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS CAA 90 bp CACAGGCAGAGGTTTCATTCCTGTTTGGGGCAACCTCAGTTCCACTaGGTAAGACACTATCTCAGCAATGGTTTTCTTCATGGGACGTAT +
Preference number: 6 (lower is better)
Translates to: HRQRFHSCLGQPQFH*VRHYLSNGFLHGTY
Trigger: ATACGTCCCATGAAGAAAACCATTGCTGAGATAGTGTCTTACCAAGTGGAACTGAGGTTGCCCCAAACAGGAATGAAACCTCTGCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000557060.1
CDS CAA 90 bp AAGCTGATTTGTCCGCTGAAACACAGGCAGAGGTTTCATTCCTGTTaGGGGCAACCTCAGTTCCACTTGGTAAGACACTATCTCAGCAAT +
Preference number: 6 (lower is better)
Translates to: KLICPLKHRQRFHSC*GQPQFHLVRHYLSN
Trigger: ATTGCTGAGATAGTGTCTTACCAAGTGGAACTGAGGTTGCCCCAAACAGGAATGAAACCTCTGCCTGTGTTTCAGCGGACAAATCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000557060.1
CDS CAA 90 bp TTCTCCACCTGGCATCTCAAGGTCTCCAATGATAACACCACAGGCTaGCTGTGTTCCATGCAGTACCAGAATCGGATTGTCATCATATTC +
Preference number: 6 (lower is better)
Translates to: FSTWHLKVSNDNTTG*LCSMQYQNRIVIIF
Trigger: GAATATGATGACAATCCGATTCTGGTACTGCATGGAACACAGCAAGCCTGTGGTGTTATCATTGGAGACCTTGAGATGCCAGGTGGAGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CAA 90 bp AGTTGTTTGATGGTCACAGAGCACACAGTAAAGTTGTACTCTTCCTaGTCACAGTTCCACCATGTCCCAGCGACACACTCTAGGACAAGA +
Preference number: 6 (lower is better)
Translates to: SCLMVTEHTVKLYSS*SQFHHVPATHSRTR
Trigger: TCTTGTCCTAGAGTGTGTCGCTGGGACATGGTGGAACTGTGACAAGGAAGAGTACAACTTTACTGTGTGCTCTGTGACCATCAAACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557060.1
CDS TCA 72 bp AACATGCCACGAGTGGCCATCCGAAATGGATTTACCTaGAACGAAAGACAGCAAGCGACAGTCTATTCTCTC +
Preference number: 6 (lower is better)
Translates to: NMPRVAIRNGFT*NERQQATVYSL
Trigger: GAGAGAATAGACTGTCGCTTGCTGTCTTTCGTTTCAGGTAAATCCATTTCGGATGGCCACTCGTGGCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS GCA 72 bp CCAGGTGCTCTGCAAACTCCGTTCTTTCATAGCGCTTaGTTTCTACATCACAGGTGCTTAGCTGAAGTAATG +
Preference number: 6 (lower is better)
Translates to: PGALQTPFFHSA*FLHHRCLAEVM
Trigger: CATTACTTCAGCTAAGCACCTGTGATGTAGAAAGCAAGCGCTATGAAAGAACGGAGTTTGCAGAGCACCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 72 bp ATGGCCACCCTTAAGCAGAGGTCCTCCCATTGTCTGTaGAAATGCTCTATTTGCTCCTTCAAAACCATCACA +
Preference number: 6 (lower is better)
Translates to: MATLKQRSSHCL*KCSICSFKTIT
Trigger: TGTGATGGTTTTGAAGGAGCAAATAGAGCATTTGCACAGACAATGGGAGGACCTCTGCTTAAGGGTGGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 72 bp AAAAAGGCTGACCTGAGCAGATGCTTGAGAAGAGCTTaGAGCCTGTGGAGCTCATGGTCAATTTTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: KKADLSRCLRRA*SLWSSWSIFLF
Trigger: GAACAAGAAAATTGACCATGAGCTCCACAGGCTGCAAGCTCTTCTCAAGCATCTGCTCAGGTCAGCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS CCA 72 bp TCTCTTGATCATCGCAGACATCATAAACAACAGGCTTaGAAAGCTCAGACTCAATTCGAGCCAACCAGGTGC +
Preference number: 6 (lower is better)
Translates to: SLDHRRHHKQQA*KAQTQFEPTRC
Trigger: GCACCTGGTTGGCTCGAATTGAGTCTGAGCTTTCCAAGCCTGTTGTTTATGATGTCTGCGATGATCAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555241.5
ENST00000555612.5
CDS CCA 72 bp CTCAAACAGTCCTCCAATCTCAGCCTCACAAGTAGCTaGCACAAGACACTGTGCCAGGCATATAAATTCTGT +
Preference number: 6 (lower is better)
Translates to: LKQSSNLSLTSS*HKTLCQAYKFC
Trigger: ACAGAATTTATATGCCTGGCACAGTGTCTTGTGCCAGCTACTTGTGAGGCTGAGATTGGAGGACTGTTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341472.9
CDS CCA 72 bp CAGGAGCAAGACCAGGACAGCTACATTTTCCTATCCTaGCTACGTCCAACTTCTCCACAGACTATTCTCTAT +
Preference number: 6 (lower is better)
Translates to: QEQDQDSYIFLS*LRPTSPQTILY
Trigger: ATAGAGAATAGTCTGTGGAGAAGTTGGACGTAGCCAGGATAGGAAAATGTAGCTGTCCTGGTCTTGCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557005.1
CDS CAA 72 bp GGAAACAGTTCCAAACCAAGCCACCATGAAGAAAGCTaGGCCCATGCCAAAGGACTTCAGTTAGATGGAGAA +
Preference number: 6 (lower is better)
Translates to: GNSSKPSHHEES*AHAKGLQLDGE
Trigger: TTCTCCATCTAACTGAAGTCCTTTGGCATGGGCCAAGCTTTCTTCATGGTGGCTTGGTTTGGAACTGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441438.2
CDS CAA 90 bp CTGATCCGAATCTCTGTTATAACTGAGCAGATGCTTGAGAAGAGCTaGCAGCCTGTGGAGCTCATGGTCAATTTTCTTGTTCAGGGACAA +
Preference number: 6 (lower is better)
Translates to: LIRISVITEQMLEKS*QPVELMVNFLVQGQ
Trigger: TTGTCCCTGAACAAGAAAATTGACCATGAGCTCCACAGGCTGCAAGCTCTTCTCAAGCATCTGCTCAGTTATAACAGAGATTCGGATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
CDS CAA 90 bp TTCCTGTGTCTGAAGGTTACTTGCTTCTTGGCGCAGGTCTTCAAGTaGGGTGGTATAGGTTTTCAGTTCTTCAGTTGTTGGGTATCTTGC +
Preference number: 6 (lower is better)
Translates to: FLCLKVTCFLAQVFK*GGIGFQFFSCWVSC
Trigger: GCAAGATACCCAACAACTGAAGAACTGAAAACCTATACCACCCAACTTGAAGACCTGCGCCAAGAAGCAAGTAACCTTCAGACACAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS CAA 90 bp ATCAGATTGCAAAGTTGTTTGATGGTCACAGAGCACACAGTAAAGTaGTACTCTTCCTTGTCACAGTTCCACCATGTCCCAGCGACACAC +
Preference number: 6 (lower is better)
Translates to: IRLQSCLMVTEHTVK*YSSLSQFHHVPATH
Trigger: GTGTGTCGCTGGGACATGGTGGAACTGTGACAAGGAAGAGTACAACTTTACTGTGTGCTCTGTGACCATCAAACAACTTTGCAATCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557060.1
CDS TCA 72 bp ATTCTGGGCCTTGCTCAGTGTTTAGTGAGTCTGGTGTaGGGATTTGTGCCATGGAATTATCAGAGGTGCTTA +
Preference number: 6 (lower is better)
Translates to: ILGLAQCLVSLV*GFVPWNYQRCL
Trigger: TAAGCACCTCTGATAATTCCATGGCACAAATCCTCACACCAGACTCACTAAACACTGAGCAAGGCCCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553308.1
ENST00000554584.5
ENST00000555002.6
CDS TCA 72 bp CATCGATCTCAGCTGCTCTTGATTTGTTGCTGGCCTTaGTCAACTGGTCACCCATCTGCTTTAACTGTAACT +
Preference number: 6 (lower is better)
Translates to: HRSQLLLICCWP*STGHPSALTVT
Trigger: AGTTACAGTTAAAGCAGATGGGTGACCAGTTGATCAAGGCCAGCAACAAATCAAGAGCAGCTGAGATCGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS TCA 72 bp CAGCGACACACTCTAGGACAAGAGGTCTGCTCTGTGTaGGAGTGGAGCTATTTAACCATCTATAAAATGAGC +
Preference number: 6 (lower is better)
Translates to: QRHTLGQEVCSV*EWSYLTIYKMS
Trigger: GCTCATTTTATAGATGGTTAAATAGCTCCACTCTCACACAGAGCAGACCTCTTGTCCTAGAGTGTGTCGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557060.1
CDS GCA 72 bp AGCTCATGGTCAATTTTCTTGTTCAGGGACAACCACTaGTCTTCCAGTTTTGCGATCTGGCCCTCTAATTCA +
Preference number: 6 (lower is better)
Translates to: SSWSIFLFRDNH*SSSFAIWPSNS
Trigger: TGAATTAGAGGGCCAGATCGCAAAACTGGAAGAGCAGTGGTTGTCCCTGAACAAGAAAATTGACCATGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
CDS GCA 72 bp GAGCTCAGGAAGGCTGTTAGCCACATCCACTTTGAGTaGTTCTTCTATCTTCTCCAAAAGTTGGATCCACTT +
Preference number: 6 (lower is better)
Translates to: ELRKAVSHIHFE*FFYLLQKLDPL
Trigger: AAGTGGATCCAACTTTTGGAGAAGATAGAAGAAGCACTCAAAGTGGATGTGGCTAACAGCCTTCCTGAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000556342.1
CDS CCA 72 bp GTTCTTGCTTCAAATGCTGGTGAAGGTTTAGTACGGTaGCCTTCAAGTCCACCAACAGGTCTTCTTTTCTCT +
Preference number: 6 (lower is better)
Translates to: VLASNAGEGLVR*PSSPPTGLLFS
Trigger: AGAGAAAAGAAGACCTGTTGGTGGACTTGAAGGCCACCGTACTAAACCTTCACCAGCATTTGAAGCAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000557060.1
CDS CCA 72 bp GGTTACTTGCTTCTTGGCGCAGGTCTTCAAGTTGGGTaGTATAGGTTTTCAGTTCTTCAGTTGTTGGGTATC +
Preference number: 6 (lower is better)
Translates to: GYLLLGAGLQVG*YRFSVLQLLGI
Trigger: GATACCCAACAACTGAAGAACTGAAAACCTATACCACCCAACTTGAAGACCTGCGCCAAGAAGCAAGTAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
CDS CAA 72 bp CTGAGCCCACAAAAGAAGGGCCTTTCTTGCAGACATTaGCCATCTTGCTTGCACTTTAGAGCATTTCTTAGC +
Preference number: 6 (lower is better)
Translates to: LSPQKKGLSCRH*PSCLHFRAFLS
Trigger: GCTAAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAATGTCTGCAAGAAAGGCCCTTCTTTTGTGGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS CAA 72 bp TCATCGATCTCAGCTGCTCTTGATTTGTTGCTGGCCTaGATCAACTGGTCACCCATCTGCTTTAACTGTAAC +
Preference number: 6 (lower is better)
Translates to: SSISAALDLLLA*INWSPICFNCN
Trigger: GTTACAGTTAAAGCAGATGGGTGACCAGTTGATCAAGGCCAGCAACAAATCAAGAGCAGCTGAGATCGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS TCA 72 bp TTTCCCATATGCTTCCTGAACAATTGTTCCAGAGGATaGGGAAGCTCTGTCTTCTTCCATGTCCTTGTCATG +
Preference number: 6 (lower is better)
Translates to: FPICFLNNCSRG*GSSVFFHVLVM
Trigger: CATGACAAGGACATGGAAGAAGACAGAGCTTCCTCATCCTCTGGAACAATTGTTCAGGAAGCATATGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553308.1
ENST00000554584.5
ENST00000555002.6
CDS TCA 72 bp TCCTTAATCAGCTCTTTTTCGTTATGGAGGTCCTCGTaGAGCTCTGGAAGAGGATCTTCACTTTGTGCCTTT +
Preference number: 6 (lower is better)
Translates to: SLISSFSLWRSS*SSGRGSSLCAF
Trigger: AAAGGCACAAAGTGAAGATCCTCTTCCAGAGCTTCACGAGGACCTCCATAACGAAAAAGAGCTGATTAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000555002.6
ENST00000555612.5
CDS TCA 72 bp ACCTTAATCAGCTCTTTTTCGTTATGGAGGTCCTCGTaGAGCTCTGGAAGAGGATCTTCACTTTGTGCCTTT +
Preference number: 6 (lower is better)
Translates to: TLISSFSLWRSS*SSGRGSSLCAF
Trigger: AAAGGCACAAAGTGAAGATCCTCTTCCAGAGCTTCACGAGGACCTCCATAACGAAAAAGAGCTGATTAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS GCA 72 bp CCACACTCACATCATCCAGGGAAGGCTGATTGTAATTaGAAGAAAGAGTCTGGGCAAGCTTCTCAATATGAA +
Preference number: 6 (lower is better)
Translates to: PHSHHPGKADCN*KKESGQASQYE
Trigger: TTCATATTGAGAAGCTTGCCCAGACTCTTTCTTGCAATTACAATCAGCCTTCCCTGGATGATGTGAGTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS GCA 72 bp CAAAAGAAGGGCCTTTCTTGCAGACATTTGCCATCTTaGTTGCACTTTAGAGCATTTCTTAGCTGGAGGACT +
Preference number: 6 (lower is better)
Translates to: QKKGLSCRHLPS*LHFRAFLSWRT
Trigger: AGTCCTCCAGCTAAGAAATGCTCTAAAGTGCAAGCAAGATGGCAAATGTCTGCAAGAAAGGCCCTTCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS GCA 72 bp ACAAGACACTGTGCCAGGCATATAAATTCTGTAAAGTaGAGAACTTCTCCAGGCATCTTCTGGTTCCAGCAA +
Preference number: 6 (lower is better)
Translates to: TRHCARHINSVK*RTSPGIFWFQQ
Trigger: TTGCTGGAACCAGAAGATGCCTGGAGAAGTTCTGCACTTTACAGAATTTATATGCCTGGCACAGTGTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341472.9
CDS CCA 72 bp AACTGTGAGTTTATCCAGCACGTGAAGGCTTTCTTCTaGGTGTCTTCCTGTTCAGCTTGCAATGAAATATGG +
Preference number: 6 (lower is better)
Translates to: NCEFIQHVKAFF*VSSCSACNEIW
Trigger: CCATATTTCATTGCAAGCTGAACAGGAAGACACCCAGAAGAAAGCCTTCACGTGCTGGATAAACTCACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS CAA 72 bp CTTCAGTTGTTGGGTATCTTGCAGATGATTCCTGAGTaGTATCGTTATCATGTTGGCAATACTGGGGCCACA +
Preference number: 6 (lower is better)
Translates to: LQLLGILQMIPE*YRYHVGNTGAT
Trigger: TGTGGCCCCAGTATTGCCAACATGATAACGATACAACTCAGGAATCATCTGCAAGATACCCAACAACTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS CAA 72 bp CAAAGTTGTTTGATGGTCACAGAGCACACAGTAAAGTaGTACTCTTCCTTGTCACAGTTCCACCATGTCCCA +
Preference number: 6 (lower is better)
Translates to: QSCLMVTEHTVK*YSSLSQFHHVP
Trigger: TGGGACATGGTGGAACTGTGACAAGGAAGAGTACAACTTTACTGTGTGCTCTGTGACCATCAAACAACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557060.1
CDS CAA 90 bp TTGAGCTTGTCATCGATCTCAGCTGCTCTTGATTTGTTGCTGGCCTaGATCAACTGGTCACCCATCTGCTTTAACTGTAACTTGTTTTCA +
Preference number: 6 (lower is better)
Translates to: LSLSSISAALDLLLA*INWSPICFNCNLFS
Trigger: TGAAAACAAGTTACAGTTAAAGCAGATGGGTGACCAGTTGATCAAGGCCAGCAACAAATCAAGAGCAGCTGAGATCGATGACAAGCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CAA 90 bp TCGTTAATTTTGTTGAGCTTGTCATCGATCTCAGCTGCTCTTGATTaGTTGCTGGCCTTGATCAACTGGTCACCCATCTGCTTTAACTGT +
Preference number: 6 (lower is better)
Translates to: SLILLSLSSISAALD*LLALINWSPICFNC
Trigger: ACAGTTAAAGCAGATGGGTGACCAGTTGATCAAGGCCAGCAACAAATCAAGAGCAGCTGAGATCGATGACAAGCTCAACAAAATTAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CAA 90 bp GATCCGATGACATCAAAAAGATGTTGCCAACGATCGTTAATTTTGTaGAGCTTGTCATCGATCTCAGCTGCTCTTGATTTGTTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: DPMTSKRCCQRSLIL*SLSSISAALDLLLA
Trigger: GGCCAGCAACAAATCAAGAGCAGCTGAGATCGATGACAAGCTCAACAAAATTAACGATCGTTGGCAACATCTTTTTGATGTCATCGGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS TCA 72 bp AAACATCCACCTGGAGTTTGTCTGATCTGCCATACTTaGTCCGATGACATCAAAAAGATGTTGCCAACGATC +
Preference number: 6 (lower is better)
Translates to: KHPPGVCLICHT*SDDIKKMLPTI
Trigger: GATCGTTGGCAACATCTTTTTGATGTCATCGGATCAAGTATGGCAGATCAGACAAACTCCAGGTGGATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357395.7
ENST00000554584.5
CDS TCA 72 bp CATACCACCTTCTTAAGATCCTATACGAAAGAAGGGTaGTGGAGATGTGGCTATCTCCAATGGCAGATGATT +
Preference number: 6 (lower is better)
Translates to: HTTFLRSYTKEG*WRCGYLQWQMI
Trigger: AATCATCTGCCATTGGAGATAGCCACATCTCCATCACCCTTCTTTCGTATAGGATCTTAAGAAGGTGGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557005.1
CDS GCA 72 bp TCTCCAATGATAACACCACAGGCTTGCTGTGTTCCATaGAGTACCAGAATCGGATTGTCATCATATTCACTT +
Preference number: 6 (lower is better)
Translates to: SPMITPQACCVP*STRIGLSSYSL
Trigger: AAGTGAATATGATGACAATCCGATTCTGGTACTGCATGGAACACAGCAAGCCTGTGGTGTTATCATTGGAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 72 bp AGCAGCCTTCCAGCACATCCTTATGATTTAAAGGAGTaGAGTTTGCATGACAAAACCCCACTAGTGATACAA +
Preference number: 6 (lower is better)
Translates to: SSLPAHPYDLKE*SLHDKTPLVIQ
Trigger: TTGTATCACTAGTGGGGTTTTGTCATGCAAACTGCACTCCTTTAAATCATAAGGATGTGCTGGAAGGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394768.6
CDS CCA 72 bp TCAGCTGCTCTTGATTTGTTGCTGGCCTTGATCAACTaGTCACCCATCTGCTTTAACTGTAACTTGTTTTCA +
Preference number: 6 (lower is better)
Translates to: SAALDLLLALIN*SPICFNCNLFS
Trigger: TGAAAACAAGTTACAGTTAAAGCAGATGGGTGACCAGTTGATCAAGGCCAGCAACAAATCAAGAGCAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CCA 72 bp CTACAGAACAGGCTTTCAAGTTCATTACATAGCAGCTaGAGTACATCAGCAATGTCTTGCAAAGCTGTCTCA +
Preference number: 6 (lower is better)
Translates to: LQNRLSSSLHSS*STSAMSCKAVS
Trigger: TGAGACAGCTTTGCAAGACATTGCTGATGTACTCCAGCTGCTATGTAATGAACTTGAAAGCCTGTTCTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554997.1
CDS CAA 72 bp ATCTTCGGTGGGAAGCTCAGGACTAGATGCCATTCTTaGACTCAATGGAGATTATATCATGTCCATCTCAGT +
Preference number: 6 (lower is better)
Translates to: IFGGKLRTRCHS*TQWRLYHVHLS
Trigger: ACTGAGATGGACATGATATAATCTCCATTGAGTCAAAGAATGGCATCTAGTCCTGAGCTTCCCACCGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS CAA 72 bp AGGTTTCATTCCTGTTTGGGGCAACCTCAGTTCCACTaGGTAAGACACTATCTCAGCAATGGTTTTCTTCAT +
Preference number: 6 (lower is better)
Translates to: RFHSCLGQPQFH*VRHYLSNGFLH
Trigger: ATGAAGAAAACCATTGCTGAGATAGTGTCTTACCAAGTGGAACTGAGGTTGCCCCAAACAGGAATGAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000557060.1
CDS CAA 72 bp ATCTCTGTTATAACTGAGCAGATGCTTGAGAAGAGCTaGCAGCCTGTGGAGCTCATGGTCAATTTTCTTGTT +
Preference number: 6 (lower is better)
Translates to: ISVITEQMLEKS*QPVELMVNFLV
Trigger: AACAAGAAAATTGACCATGAGCTCCACAGGCTGCAAGCTCTTCTCAAGCATCTGCTCAGTTATAACAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344113.8
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
CDS CAA 72 bp GGCTTGGTTCACCTGAGTCCACCTTTTATGAGTATTTaGGCATTTCTCTTCGATTATTTCAGCAACAGAGGG +
Preference number: 6 (lower is better)
Translates to: GLVHLSPPFMSI*AFLFDYFSNRG
Trigger: CCCTCTGTTGCTGAAATAATCGAAGAGAAATGCCAAAATACTCATAAAAGGTGGACTCAGGTGAACCAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000557024.1
CDS CAA 72 bp TGTAACGTCTTCACAGCTACGTCACTAAGTGGGAGCTaGAGGCTCACTTCATTCAAATGTTCAATATCAGGT +
Preference number: 6 (lower is better)
Translates to: CNVFTATSLSGS*RLTSFKCSISG
Trigger: ACCTGATATTGAACATTTGAATGAAGTGAGCCTCAAGCTCCCACTTAGTGACGTAGCTGTGAAGACGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000556342.1
CDS CAA 90 bp AATTCTTGTTCTGCAATTCTGAAGGCCTCTCTCAGATTGTCTTTGTaGGATCTATGCTTCACACTCTTCATGTCAATTAGGTCTGGTCGC +
Preference number: 6 (lower is better)
Translates to: NSCSAILKASLRLSL*DLCFTLFMSIRSGR
Trigger: GCGACCAGACCTAATTGACATGAAGAGTGTGAAGCATAGATCCAACAAAGACAATCTGAGAGAGGCCTTCAGAATTGCAGAACAAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS CAA 90 bp TTAATTTTGTTGAGCTTGTCATCGATCTCAGCTGCTCTTGATTTGTaGCTGGCCTTGATCAACTGGTCACCCATCTGCTTTAACTGTAAC +
Preference number: 6 (lower is better)
Translates to: LILLSLSSISAALDL*LALINWSPICFNCN
Trigger: GTTACAGTTAAAGCAGATGGGTGACCAGTTGATCAAGGCCAGCAACAAATCAAGAGCAGCTGAGATCGATGACAAGCTCAACAAAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS TCA 72 bp ATTCAAGTTCCTTCTGGGATTCTTCCATCTTCAGCCTaGTGTCCAAATCTGGTGAAACGTCAGTTAAGTTCT +
Preference number: 6 (lower is better)
Translates to: IQVPSGILPSSA*CPNLVKRQLSS
Trigger: AGAACTTAACTGACGTTTCACCAGATTTGGACATCAGGCTGAAGATGGAAGAATCCCAGAAGGAACTTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS TCA 72 bp TCCAATTCAGAAAGGTTAACTGGTTGGAGAGCTTCTTaGTGCTCTGGCTCTGAGGATTTCTTTAGAATGGTA +
Preference number: 6 (lower is better)
Translates to: SNSERLTGWRAS*CSGSEDFFRMV
Trigger: TACCATTCTAAAGAAATCCTCAGAGCCAGAGCATCAAGAAGCTCTCCAACCAGTTAACCTTTCTGAATTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553455.1
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
CDS TCA 72 bp GAACTTGGTGAATGCACGGAGTCTTCATCTGAAGTTTaGTGCTCCACATTGTTCATCCAGCTAATCATTTCT +
Preference number: 6 (lower is better)
Translates to: ELGECTESSSEV*CSTLFIQLIIS
Trigger: AGAAATGATTAGCTGGATGAACAATGTGGAGCATCAAACTTCAGATGAAGACTCCGTGCATTCACCAAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS TCA 72 bp CTTCTTCACCTTCTCCCGTATGCCAACAAGAGTGTCTaGATTACATTCATCTCACTCTTACACAGTGAAGTA +
Preference number: 6 (lower is better)
Translates to: LLHLLPYANKSV*ITFISLLHSEV
Trigger: TACTTCACTGTGTAAGAGTGAGATGAATGTAATTCAGACACTCTTGTTGGCATACGGGAGAAGGTGAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557060.1
CDS TCA 72 bp TCAGAAGGAAATACATGTCTCAAATTAACATCGTACTaGAGTCACTCTTTTTGGCCCCTGGTCCCTCCATTA +
Preference number: 6 (lower is better)
Translates to: SEGNTCLKLTSY*SHSFWPLVPPL
Trigger: TAATGGAGGGACCAGGGGCCAAAAAGAGTGACTTCAGTACGATGTTAATTTGAGACATGTATTTCCTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557060.1
CDS GCA 72 bp CTCCACATTGTTCATCCAGCTAATCATTTCTGTGATTaGTTTACGAGACGGCAATTTCTCCATTTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LHIVHPANHFCD*FTRRQFLHLKL
Trigger: CAGCTTCAAATGGAGAAATTGCCGTCTCGTAAAGCAATCACAGAAATGATTAGCTGGATGAACAATGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS GCA 72 bp AGGATACTACAGAGAACTTCTTCACCTTCTCCCGTATaGCAACAAGAGTGTCTGAATTACATTCATCTCACT +
Preference number: 6 (lower is better)
Translates to: RILQRTSSPSPV*QQECLNYIHLT
Trigger: AGTGAGATGAATGTAATTCAGACACTCTTGTTGGCATACGGGAGAAGGTGAAGAAGTTCTCTGTAGTATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557060.1
CDS CCA 72 bp CCTGCTTCATTTAAAGTAGCGTGTTCTAGATTCCACTaGGCTAGTGTCTCAAAGGGTACCTCTTTAATTTCT +
Preference number: 6 (lower is better)
Translates to: PASFKVACSRFH*ASVSKGTSLIS
Trigger: AGAAATTAAAGAGGTACCCTTTGAGACACTAGCCCAGTGGAATCTAGAACACGCTACTTTAAATGAAGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS CCA 72 bp AGTAATTCAGAGTATGCTGGGAAGATTCCAACCACTTaGTTAACTGATCCGAATCTCTGTTATAAACCCCCA +
Preference number: 6 (lower is better)
Translates to: SNSEYAGKIPTT*LTDPNLCYKPP
Trigger: TGGGGGTTTATAACAGAGATTCGGATCAGTTAACCAAGTGGTTGGAATCTTCCCAGCATACTCTGAATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357395.7
CDS CAA 72 bp TCTGCAATTCTGAAGGCCTCTCTCAGATTGTCTTTGTaGGATCTATGCTTCACACTCTTCATGTCAATTAGG +
Preference number: 6 (lower is better)
Translates to: SAILKASLRLSL*DLCFTLFMSIR
Trigger: CCTAATTGACATGAAGAGTGTGAAGCATAGATCCAACAAAGACAATCTGAGAGAGGCCTTCAGAATTGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS CAA 72 bp TCAGAAAAGCAGGCCTCATGTTCTTTGATGAGACCCTaGGTCCTTCCTCTACGGATAAGTTTCTTTTCTTTA +
Preference number: 6 (lower is better)
Translates to: SEKQASCSLMRP*VLPLRISFFSL
Trigger: TAAAGAAAAGAAACTTATCCGTAGAGGAAGGACCAAGGGTCTCATCAAAGAACATGAGGCCTGCTTTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674144.1
CDS CAA 72 bp CAGGCTTGCTGTGTTCCATGCAGTACCAGAATCGGATaGTCATCATATTCACTTCATCATAGAGTTGATCAT +
Preference number: 6 (lower is better)
Translates to: QACCVPCSTRIG*SSYSLHHRVDH
Trigger: ATGATCAACTCTATGATGAAGTGAATATGATGACAATCCGATTCTGGTACTGCATGGAACACAGCAAGCCTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CAA 90 bp TTCATATTTTGTAACGTCTTCACAGCTACGTCACTAAGTGGGAGCTaGAGGCTCACTTCATTCAAATGTTCAATATCAGGTGATTGGGCT +
Preference number: 6 (lower is better)
Translates to: FIFCNVFTATSLSGS*RLTSFKCSISGDWA
Trigger: AGCCCAATCACCTGATATTGAACATTTGAATGAAGTGAGCCTCAAGCTCCCACTTAGTGACGTAGCTGTGAAGACGTTACAAAATATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000553289.5
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
ENST00000556342.1
CDS CAA 90 bp ATGACATCAAAAAGATGTTGCCAACGATCGTTAATTTTGTTGAGCTaGTCATCGATCTCAGCTGCTCTTGATTTGTTGCTGGCCTTGATC +
Preference number: 6 (lower is better)
Translates to: MTSKRCCQRSLILLS*SSISAALDLLLALI
Trigger: GATCAAGGCCAGCAACAAATCAAGAGCAGCTGAGATCGATGACAAGCTCAACAAAATTAACGATCGTTGGCAACATCTTTTTGATGTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CAA 90 bp ATAACACCACAGGCTTGCTGTGTTCCATGCAGTACCAGAATCGGATaGTCATCATATTCACTTCATCATAGAGTTGATCATAAATCTTCC +
Preference number: 6 (lower is better)
Translates to: ITPQACCVPCSTRIG*SSYSLHHRVDHKSS
Trigger: GGAAGATTTATGATCAACTCTATGATGAAGTGAATATGATGACAATCCGATTCTGGTACTGCATGGAACACAGCAAGCCTGTGGTGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CAA 90 bp TGTGGCTATCTCCAATGGCAGATGATTTATAATAGTTCTGACTTCTaGGGAATTACATCAAGCAAAGTAACACAGAGCCACCAGGAAGAT +
Preference number: 6 (lower is better)
Translates to: CGYLQWQMIYNSSDF*GITSSKVTQSHQED
Trigger: ATCTTCCTGGTGGCTCTGTGTTACTTTGCTTGATGTAATTCCCAAGAAGTCAGAACTATTATAAATCATCTGCCATTGGAGATAGCCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557005.1
CDS CCA 72 bp AGGAATGTCAAGGCATGTTCTATATTGATTCTACACTaGAAGGTATTAGATCCTTTATCCCGAGGCAACTGT +
Preference number: 6 (lower is better)
Translates to: RNVKACSILILH*KVLDPLSRGNC
Trigger: ACAGTTGCCTCGGGATAAAGGATCTAATACCTTCCAGTGTAGAATCAATATAGAACATGCCTTGACATTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS CAA 72 bp TGTTCTGCAATTCTGAAGGCCTCTCTCAGATTGTCTTaGTTGGATCTATGCTTCACACTCTTCATGTCAATT +
Preference number: 6 (lower is better)
Translates to: CSAILKASLRLS*LDLCFTLFMSI
Trigger: AATTGACATGAAGAGTGTGAAGCATAGATCCAACAAAGACAATCTGAGAGAGGCCTTCAGAATTGCAGAACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS CAA 72 bp AATTCTTGTTCTGCAATTCTGAAGGCCTCTCTCAGATaGTCTTTGTTGGATCTATGCTTCACACTCTTCATG +
Preference number: 6 (lower is better)
Translates to: NSCSAILKASLR*SLLDLCFTLFM
Trigger: CATGAAGAGTGTGAAGCATAGATCCAACAAAGACAATCTGAGAGAGGCCTTCAGAATTGCAGAACAAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS CAA 72 bp AAAAGATGTTGCCAACGATCGTTAATTTTGTTGAGCTaGTCATCGATCTCAGCTGCTCTTGATTTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: KRCCQRSLILLS*SSISAALDLLL
Trigger: CAGCAACAAATCAAGAGCAGCTGAGATCGATGACAAGCTCAACAAAATTAACGATCGTTGGCAACATCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CAA 90 bp AGCTTAATTGATCGGTTTCTTAGGAATGTCAAGGCATGTTCTATATaGATTCTACACTGGAAGGTATTAGATCCTTTATCCCGAGGCAAC +
Preference number: 6 (lower is better)
Translates to: SLIDRFLRNVKACSI*ILHWKVLDPLSRGN
Trigger: GTTGCCTCGGGATAAAGGATCTAATACCTTCCAGTGTAGAATCAATATAGAACATGCCTTGACATTCCTAAGAAACCGATCAATTAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS CAA 90 bp TTTAATTCTTGTTCTGCAATTCTGAAGGCCTCTCTCAGATTGTCTTaGTTGGATCTATGCTTCACACTCTTCATGTCAATTAGGTCTGGT +
Preference number: 6 (lower is better)
Translates to: FNSCSAILKASLRLS*LDLCFTLFMSIRSG
Trigger: ACCAGACCTAATTGACATGAAGAGTGTGAAGCATAGATCCAACAAAGACAATCTGAGAGAGGCCTTCAGAATTGCAGAACAAGAATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS TCA 72 bp AACAACTGGATTCATTTCATATTAACAGTGAAGAAATaGGATGGGCCCCTTTCCTTTGAAGGGTATCTTGCT +
Preference number: 6 (lower is better)
Translates to: NNWIHFILTVKK*DGPLSFEGYLA
Trigger: AGCAAGATACCCTTCAAAGGAAAGGGGCCCATCTCATTTCTTCACTGTTAATATGAAATGAATCCAGTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554928.1
CDS CCA 72 bp TGCAATAAAGAAGGAAGTATTTTGGCAGAGTATGCTTaGATCAACAACATGTCAGCAACAAGCTTCTGGAAA +
Preference number: 6 (lower is better)
Translates to: CNKEGSILAEYA*INNMSATSFWK
Trigger: TTTCCAGAAGCTTGTTGCTGACATGTTGTTGATCCAAGCATACTCTGCCAAAATACTTCCTTCTTTATTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000673797.1
CDS CAA 72 bp TCACTTCTTGCCATAAGCTCATCAAACATAGAGCCTTaGGCAATAAGATGCTTCAAAGATTCTTCCATTGAG +
Preference number: 6 (lower is better)
Translates to: SLLAISSSNIEP*AIRCFKDSSIE
Trigger: CTCAATGGAAGAATCTTTGAAGCATCTTATTGCCAAAGGCTCTATGTTTGATGAGCTTATGGCAAGAAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS CAA 72 bp ATGACATCAAAAAGATGTTGCCAACGATCGTTAATTTaGTTGAGCTTGTCATCGATCTCAGCTGCTCTTGAT +
Preference number: 6 (lower is better)
Translates to: MTSKRCCQRSLI*LSLSSISAALD
Trigger: ATCAAGAGCAGCTGAGATCGATGACAAGCTCAACAAAATTAACGATCGTTGGCAACATCTTTTTGATGTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000394768.6
ENST00000554584.5
ENST00000555002.6
ENST00000555612.5
CDS CAA 72 bp TATCTCAATGTTTACGTTTCAAGGTTTGGGCATCAATaGTTAAGGCCCATGCAATGGGCAAAATTAAAGGCA +
Preference number: 6 (lower is better)
Translates to: YLNVYVSRFGHQ*LRPMQWAKLKA
Trigger: TGCCTTTAATTTTGCCCATTGCATGGGCCTTAACAATTGATGCCCAAACCTTGAAACGTAAACATTGAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557005.1
CDS TCA 72 bp GTTCACTGGAGGAAAAAGGGAGGGAAAACCAAGCCATaGACAACCCAAATAGTGTTAATAAATCAAATTATG +
Preference number: 6 (lower is better)
Translates to: VHWRKKGGKTKP*TTQIVLINQIM
Trigger: CATAATTTGATTTATTAACACTATTTGGGTTGTTCATGGCTTGGTTTTCCCTCCCTTTTTCCTCCAGTGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556725.1
CDS CCA 72 bp ATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATaGCTGGGTCAAATGGTATTTCTAGTTCTAGATCAT +
Preference number: 6 (lower is better)
Translates to: IYSPLGIYPVMG*LGQMVFLVLDH
Trigger: ATGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557060.1
CDS CAA 72 bp GATCGGTTTCTTAGGAATGTCAAGGCATGTTCTATATaGATTCTACACTGGAAGGTATTAGATCCTTTATCC +
Preference number: 6 (lower is better)
Translates to: DRFLRNVKACSI*ILHWKVLDPLS
Trigger: GGATAAAGGATCTAATACCTTCCAGTGTAGAATCAATATAGAACATGCCTTGACATTCCTAAGAAACCGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341472.9
ENST00000344113.8
ENST00000357395.7
ENST00000358025.7
ENST00000554584.5
ENST00000555002.6
ENST00000674003.1
ENST00000674144.1
CDS CAA 90 bp AAACAAGAGATACAACATGTATTATTCTTACAGGGTCACACTCAGTaGAGACACTTGCTTTTACTTCAGATTTCATATGAAGCTTTTGCC +
Preference number: 6 (lower is better)
Translates to: KQEIQHVLFLQGHTQ*RHLLLLQISYEAFA
Trigger: GGCAAAAGCTTCATATGAAATCTGAAGTAAAAGCAAGTGTCTCAACTGAGTGTGACCCTGTAAGAATAATACATGTTGTATCTCTTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557024.1
CDS CCA 72 bp TCCAAAACAAGTATGGCTTTCTACTATGTGCTTCCATaGTTCATGAAGAACAAAGTAACTATGCCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: SKTSMAFYYVLP*FMKNKVTMPSF
Trigger: AAAAGAAGGCATAGTTACTTTGTTCTTCATGAACCATGGAAGCACATAGTAGAAAGCCATACTTGTTTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674144.1
CDS TCA 72 bp TACAACATGTATTATTCTTACAGGGTCACACTCAGTTaGGACACTTGCTTTTACTTCAGATTTCATATGAAG +
Preference number: 6 (lower is better)
Translates to: YNMYYSYRVTLS*DTCFYFRFHMK
Trigger: CTTCATATGAAATCTGAAGTAAAAGCAAGTGTCTCAACTGAGTGTGACCCTGTAAGAATAATACATGTTGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557024.1