RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYNC (Homo sapiens)

Ensembl gene IDs: ENSG00000162520

Ensembl transcript IDs: ENST00000373484.4, ENST00000409190.8, ENST00000417633.1, ENST00000426909.1

Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTaGGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTT +
Preference number: 1 (lower is better)
Translates to: TPRCVHTFILHSVHM*GLLLEDRRLIFPFL
Trigger: AAGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR GCA 90 bp CCTCCGGCCAACTCTAGAATCTTTTTAAGCAGGTCAGCCAGTATTTaGAACTTCCACAGGATGAATTGCTTGCCAAGTTTCTGGCACTCT +
Preference number: 1 (lower is better)
Translates to: PPANSRIFLSRSASI*NFHRMNCLPSFWHS
Trigger: AGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTGGAAGTTGCAAATACTGGCTGACCTGCTTAAAAAGATTCTAGAGTTGGCCGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR TCA 90 bp CATCTTTCCTTTCCTTGGTGCATTGAGATCAGTATCAACAGCAGATaGAATAGAATCCAGCAAAGAGTTGACATGTTCTGCCTCCGGCCA +
Preference number: 1 (lower is better)
Translates to: HLSFPWCIEISINSR*NRIQQRVDMFCLRP
Trigger: TGGCCGGAGGCAGAACATGTCAACTCTTTGCTGGATTCTATTTCATCTGCTGTTGATACTGATCTCAATGCACCAAGGAAAGGAAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR GCA 90 bp TTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTaGATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTC +
Preference number: 1 (lower is better)
Translates to: FKILPDVSIHSSFTQ*ICEGCCWKTGGSSF
Trigger: GAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR TCA 90 bp AATCAGAGGTGGCACAGATTAGTCTTTGATAAGGTAACGTTTCTTTaGAGTCTATCTGTAGAGAACTACATGGACTTCCAAGAGTGTCAA +
Preference number: 1 (lower is better)
Translates to: NQRWHRLVFDKVTFL*SLSVENYMDFQECQ
Trigger: TTGACACTCTTGGAAGTCCATGTAGTTCTCTACAGATAGACTTCAAAGAAACGTTACCTTATCAAAGACTAATCTGTGCCACCTCTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409190.8
3UTR-3UTR TCA 90 bp TCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCAAATCCAGCAAAGAGTTaGCATGTTCTGCCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: SSFTQCICEGCCWKTGGSNPAKS*HVLPPA
Trigger: GGCCGGAGGCAGAACATGTCAACTCTTTGCTGGATT...TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR TCA 90 bp TACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGAATCCAGCAAAGAGTTaGCATGTTCTGCCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: YIHPSLSAYVRVVAGRQENPAKS*HVLPPA
Trigger: GGCCGGAGGCAGAACATGTCAACTCTTTGCTGGATT...CTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR GCA 90 bp AGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTAGAGTTGACATGTTCTaGCTCCGGCCAACTCTAGAA +
Preference number: 2 (lower is better)
Translates to: SAYVRVVAGRQEAHLSFPRVDMF*LRPTLE
Trigger: TTCTAGAGTTGGCCGGAGGCAGAACATGTCAACTCT...AGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR GCA 90 bp CTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTAGAGTTGACATGTTCTaGCTCCGGCCAACTCTAGAA +
Preference number: 2 (lower is better)
Translates to: LSAYVRVVAGRQEAHLSFRVDMF*LRPTLE
Trigger: TTCTAGAGTTGGCCGGAGGCAGAACATGTCAACTCT...AAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CCA 90 bp TCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTGGCACTCTTGTCTaGTTGGAAGAGTACATCCAA +
Preference number: 2 (lower is better)
Translates to: SSFTQCICEGCCWKTGGSSGTLV*LEEYIQ
Trigger: TTGGATGTACTCTTCCAACCAGACAAGAGTGCCAGA...TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CCA 90 bp CTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTTGCTTGCCAAGTTTCTaGCACTCTTGTCTGGTTGGA +
Preference number: 2 (lower is better)
Translates to: LSAYVRVVAGRQEAHLSFCLPSF*HSCLVG
Trigger: TCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCA...AAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR TCA 90 bp TACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGCTTTCCTTGGTGCATTaGGATCAGTATCAACAGCAG +
Preference number: 2 (lower is better)
Translates to: YIHPSLSAYVRVVAGRQELSLVH*DQYQQQ
Trigger: CTGCTGTTGATACTGATCTCAATGCACCAAGGAAAG...CTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR GCA 90 bp GATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGTTCCACAGGATGAATTaGTTGCCAAGTTTCTGGCAC +
Preference number: 2 (lower is better)
Translates to: DVSIHSSFTQCICEGCCWFHRMN*LPSFWH
Trigger: GTGCCAGAAACTTGGCAAGCAATTCATCCTGTGGAA...CCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR GCA 90 bp TGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTGGTGCATCTTTCCTTTCCTTGGTaGATTGAGATCAGTATCAAC +
Preference number: 2 (lower is better)
Translates to: CEGCCWKTGGSSFLSLVHLSFPW*IEISIN
Trigger: GTTGATACTGATCTCAATGCACCAAGGAAAGGAAAG...ATGCACCAAGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR CAA 90 bp TTGCAACTTCCACAGGATGAATTGCTTGCCAAGTTTCTGGCACTCTaGTCTGGTTGGAAGAGTACATCCAAAGGGTACTTAGTGATCCTT +
Preference number: 2 (lower is better)
Translates to: LQLPQDELLAKFLAL*SGWKSTSKGYLVIL
Trigger: AAGGATCACTAAGTACCCTTTGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTGGAAGTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409190.8
3UTR-3UTR GCA 90 bp GATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAGGTCAGCCAGTATTTaGAACTTCCACAGGATGAAT +
Preference number: 2 (lower is better)
Translates to: DVSIHSSFTQCICEGCCWRSASI*NFHRMN
Trigger: ATTCATCCTGTGGAAGTTGCAAATACTGGCTGACCT...CCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CCA 90 bp AAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGTCTGGCACTCTTGTCTaGTTGGAAGAGTACATCCAA +
Preference number: 2 (lower is better)
Translates to: KYSQMCPYIHPSLSAYVRSGTLV*LEEYIQ
Trigger: TTGGATGTACTCTTCCAACCAGACAAGAGTGCCAGA...CCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CCA 90 bp ACATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCTGTGAGGGTTGTTGCTaGAAGACAGGAGGCTCATCT +
Preference number: 2 (lower is better)
Translates to: TFFKILPDVSIHSSFTQCCEGCC*KTGGSS
Trigger: AGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACA...GCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR TCA 90 bp TACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGAGTATCAACAGCAGATaGAATAGAATCCAGCAAAGA +
Preference number: 2 (lower is better)
Translates to: YIHPSLSAYVRVVAGRQESINSR*NRIQQR
Trigger: TCTTTGCTGGATTCTATTTCATCTGCTGTTGATACT...CTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CCA 90 bp CATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCAGCACTCTTGTCTGGTTaGAAGAGTACATCCAAAGGG +
Preference number: 2 (lower is better)
Translates to: HSLKYSQMCPYIHPSLSAALLSG*KSTSKG
Trigger: CCCTTTGGATGTACTCTTCCAACCAGACAAGAGTGC...TGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CCA 90 bp TTTTCACTGGGGCCTTTACTTAGGTTAGAAATAATAGGCTTTGAAGGCCTCTATTGCTTGCCAAGTTTCTaGCACTCTTGTCTGGTTGGA +
Preference number: 2 (lower is better)
Translates to: FSLGPLLRLEIIGFEGLYCLPSF*HSCLVG
Trigger: TCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCA...ATAGAGGCCTTCAAAGCCTATTATTTCTAACCTAAGTAAAGGCCCCAGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409190.8
3UTR-3UTR GCA 90 bp ATTAAATGTAATAGTCCCAGAGCTGTAGAAAAGAACTTTACTCCTTCCCAGGGATCATCCTTCACTCAGTaGATATGTGAGGGTTGTTGC +
Preference number: 2 (lower is better)
Translates to: IKCNSPRAVEKNFTPSQGSSFTQ*ICEGCC
Trigger: GCAACAACCCTCACATATGCACTGAGTGAAGGATGA...TCCCTGGGAAGGAGTAAAGTTCTTTTCTACAGCTCTGGGACTATTACATTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409190.8
3UTR-3UTR TCA 90 bp TTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGCAACTTCCACAGGATaGATTGCTTGCCAAGTTTCT +
Preference number: 2 (lower is better)
Translates to: FKILPDVSIHSSFTQCICATSTG*IACQVS
Trigger: AGAAACTTGGCAAGCAATTCATCCTGTGGAAGTTGC...ACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR TCA 90 bp AAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGAGTATCAACAGCAGATaGAATAGAATCCAGCAAAGA +
Preference number: 2 (lower is better)
Translates to: KYSQMCPYIHPSLSAYVRSINSR*NRIQQR
Trigger: TCTTTGCTGGATTCTATTTCATCTGCTGTTGATACT...CCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR TCA 90 bp ATTAAATGTAATAGTCCCAGAGCTGTAGAAAAGAACTTTACTCCTTCCCAGGGACCAGAACTACTTTCATaGGGTAAGATCTTTGGGAAA +
Preference number: 2 (lower is better)
Translates to: IKCNSPRAVEKNFTPSQGPELLS*GKIFGK
Trigger: TTTCCCAAAGATCTTACCTCATGAAAGTAGTTCTGG...TCCCTGGGAAGGAGTAAAGTTCTTTTCTACAGCTCTGGGACTATTACATTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409190.8
3UTR-3UTR CAA 90 bp CAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCGGCACTCTTGTCTGGTaGGAAGAGTACATCCAAAGG +
Preference number: 3 (lower is better)
Translates to: QCICEGCCWKTGGSSFLSGTLVW*EEYIQR
Trigger: CCTTTGGATGTACTCTTCCAACCAGACAAGAGTGCC...GGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CAA 90 bp CTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTGAATCCAGCAAAGAGTaGACATGTTCTGCCTCCGGC +
Preference number: 3 (lower is better)
Translates to: LSAYVRVVAGRQEAHLSFESSKE*TCSASG
Trigger: GCCGGAGGCAGAACATGTCAACTCTTTGCTGGATTC...AAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR GCA 72 bp CTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTaGATATGTGAGGGTTGTTGCTGGAAGACAGGAGGC +
Preference number: 3 (lower is better)
Translates to: LPDVSIHSSFTQ*ICEGCCWKTGG
Trigger: GCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CAA 90 bp CTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTGGCACTCTTGTCTGGTaGGAAGAGTACATCCAAAGG +
Preference number: 3 (lower is better)
Translates to: LSAYVRVVAGRQEAHLSFGTLVW*EEYIQR
Trigger: CCTTTGGATGTACTCTTCCAACCAGACAAGAGTGCC...AAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CAA 90 bp CAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCCAGGTCAGCCAGTATTaGCAACTTCCACAGGATGAA +
Preference number: 3 (lower is better)
Translates to: QCICEGCCWKTGGSSFLSQVSQY*QLPQDE
Trigger: TTCATCCTGTGGAAGTTGCAAATACTGGCTGACCTG...GGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CAA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGGAATCCAGCAAAGAGTaGACATGTTCTGCCTCCGGC +
Preference number: 3 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKESSKE*TCSASG
Trigger: GCCGGAGGCAGAACATGTCAACTCTTTGCTGGATTC...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CAA 90 bp CAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCAAGTTTCTGGCACTCTaGTCTGGTTGGAAGAGTACA +
Preference number: 3 (lower is better)
Translates to: QCICEGCCWKTGGSSFLSKFLAL*SGWKST
Trigger: TGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTT...GGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CAA 90 bp ACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTCACAGGATGAATTGCTaGCCAAGTTTCTGGCACTCT +
Preference number: 3 (lower is better)
Translates to: TQCICEGCCWKTGGSSFLHRMNC*PSFWHS
Trigger: AGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTG...AAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CAA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGCTTCCACAGGATGAATaGCTTGCCAAGTTTCTGGCA +
Preference number: 3 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKLPQDE*LAKFLA
Trigger: TGCCAGAAACTTGGCAAGCAATTCATCCTGTGGAAG...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR GCA 72 bp AGGTCAGCCAGTATTTGCAACTTCCACAGGATGAATTaGTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGA +
Preference number: 3 (lower is better)
Translates to: RSASICNFHRMN*LPSFWHSCLVG
Trigger: TCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTGGAAGTTGCAAATACTGGCTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CAA 90 bp GATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGTTTCTGGCACTCTaGTCTGGTTGGAAGAGTACA +
Preference number: 3 (lower is better)
Translates to: DVSIHSSFTQCICEGCCWKFLAL*SGWKST
Trigger: TGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTT...CCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CAA 90 bp CAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTCAGGTCAGCCAGTATTaGCAACTTCCACAGGATGAA +
Preference number: 3 (lower is better)
Translates to: QMCPYIHPSLSAYVRVVAQVSQY*QLPQDE
Trigger: TTCATCCTGTGGAAGTTGCAAATACTGGCTGACCTG...AGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR TCA 72 bp TGTGTCCATACATTCATCCTTCACTCAGTGCATATGTaGGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTT +
Preference number: 3 (lower is better)
Translates to: CVHTFILHSVHM*GLLLEDRRLIF
Trigger: AAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CAA 90 bp CTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTTTGCTAAGAAGTTTTTaGCTGTTTCCGGGTTACAGA +
Preference number: 3 (lower is better)
Translates to: LSAYVRVVAGRQEAHLSFLLRSF*LFPGYR
Trigger: TCTGTAACCCGGAAACAGCAAAAAACTTCTTAGCAA...AAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409190.8
3UTR CCA 72 bp GAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTaGAAGAGTACATCCAAAGGGTACTTAGTGATCCTT +
Preference number: 3 (lower is better)
Translates to: ELLAKFLALLSG*KSTSKGYLVIL
Trigger: AAGGATCACTAAGTACCCTTTGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409190.8
3UTR-3UTR CAA 90 bp CATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCACCTTTCCTTGGTGCATaGAGATCAGTATCAACAGCA +
Preference number: 3 (lower is better)
Translates to: HSLKYSQMCPYIHPSLSAPFLGA*RSVSTA
Trigger: TGCTGTTGATACTGATCTCAATGCACCAAGGAAAGG...TGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR-3UTR CAA 90 bp ATTAAATGTAATAGTCCCAGAGCTGTAGAAAAGAACTTTACTCCTTCCCAGGGAAAAAATGTTTTTGGTTaGGGTCAACACAAGGCAAGA +
Preference number: 3 (lower is better)
Translates to: IKCNSPRAVEKNFTPSQGKNVFG*GQHKAR
Trigger: TCTTGCCTTGTGTTGACCCAAACCAAAAACATTTTT...TCCCTGGGAAGGAGTAAAGTTCTTTTCTACAGCTCTGGGACTATTACATTTAAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000409190.8
3UTR CCA 72 bp AGGGAAAGTGAAAGACATAAAACACTGAATCAGAGGTaGCACAGATTAGTCTTTGATAAGGTAACGTTTCTT +
Preference number: 3 (lower is better)
Translates to: RESERHKTLNQR*HRLVFDKVTFL
Trigger: AAGAAACGTTACCTTATCAAAGACTAATCTGTGCCACCTCTGATTCAGTGTTTTATGTCTTTCACTTTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR GCA 90 bp TACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGCCGCGCCCGCCGCACTaGCAGCTGCAACCGACACCG +
Preference number: 4 (lower is better)
Translates to: YIHPSLSAYVRVVAGRQEPRPPH*QLQPTP
Trigger: CGGTGTCGGTTGCAGCTGGCAGTGCGGCGGGCGCGG...CTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR GCA 90 bp CAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTTTGCAGGCGGAGCTaGCGGGCCTCTGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: QCICEGCCWKTGGSSFLSFCRRS*RASACR
Trigger: CCTGCAAGCAGAGGCCCGGCAGCTCCGCCTGCAAAA...GGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp TGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTGGTGCATTCCAGGTTCCTGTTTTaGAGGCGGAGCTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CEGCCWKTGGSSFLSLVHSRFLF*RRSCRA
Trigger: GGCCCGGCAGCTCCGCCTGCAAAACAGGAACCTGGA...ATGCACCAAGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp TCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCAAGGAGCCGCAGGAACTaGGGCTCATACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSFTQCICEGCCWKTGGSRSRRN*GSYSSS
Trigger: GGAGGAGGAGTATGAGCCTCAGTTCCTGCGGCTCCT...TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp CAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCCCAGGCTCCTCCACATaGAGAGCCTCATCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QCICEGCCWKTGGSSFLSPGSST*RASSGC
Trigger: GCAGCCAGATGAGGCTCTGCATGTGGAGGAGCCTGG...GGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp TCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCAACTTGCTGTACCTCCTaGAGGGCTGGTTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SSFTQCICEGCCWKTGGSTCCTS*RAGSRS
Trigger: GCTCCGGGAACCAGCCCTGCAGGAGGTACAGCAAGT...TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGGCTTGTGGGCTTTCCTaGCTCCACGGGCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKACGLS*LHGPLH
Trigger: GTGGAGGGGCCCGTGGAGCCAGGAAAGCCCACAAGC...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp CACAGGATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACGGAAATCGGCAAACTaGGCCACGTCCTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: HRMNCLPSFWHSCLVGRVRKSAN*ATSCWR
Trigger: CCGCCAGCAGGACGTGGCTCAGTTTGCCGATTTCCG...TACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp AGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTACTTGCTGTACCTCCTaGAGGGCTGGTTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SAYVRVVAGRQEAHLSFPTCCTS*RAGSRS
Trigger: GCTCCGGGAACCAGCCCTGCAGGAGGTACAGCAAGT...AGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp CAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTTGCCGGGCCTCTGCTTaGAGGGGTCTCAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QMCPYIHPSLSAYVRVVACRASA*RGLRAS
Trigger: GGAGGCTCTGAGACCCCTGCAAGCAGAGGCCCGGCA...AGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp ATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCATGCCGGGCCTCTGCTTaGAGGGGTCTCAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: MNCLPSFWHSCLVGRVHPCRASA*RGLRAS
Trigger: GGAGGCTCTGAGACCCCTGCAAGCAGAGGCCCGGCA...TGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp CACAGGATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTATCCAGGTTCCTGTTTTaGAGGCGGAGCTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: HRMNCLPSFWHSCLVGRVSRFLF*RRSCRA
Trigger: GGCCCGGCAGCTCCGCCTGCAAAACAGGAACCTGGA...TACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp ATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCAGCTTGTGGGCTTTCCTaGCTCCACGGGCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: MNCLPSFWHSCLVGRVHPACGLS*LHGPLH
Trigger: GTGGAGGGGCCCGTGGAGCCAGGAAAGCCCACAAGC...TGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGAGGAGCCGCAGGAACTaGGGCTCATACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKRSRRN*GSYSSS
Trigger: GGAGGAGGAGTATGAGCCTCAGTTCCTGCGGCTCCT...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGCCAGGCTCCTCCACATaGAGAGCCTCATCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKPGSST*RASSGC
Trigger: GCAGCCAGATGAGGCTCTGCATGTGGAGGAGCCTGG...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp CACAGGATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTATCAGGTTCTCCTCCATaGTGGGGCTCTGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: HRMNCLPSFWHSCLVGRVSGSPP*WGSARL
Trigger: GAGCCGAGCAGAGCCCCAGCATGGAGGAGAACCTGA...TACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp ACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTGGGGCTTCTAGTTGTTaGCGCAGCTGCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TQCICEGCCWKTGGSSFLGASSC*RSCSFC
Trigger: GCAGAAGGAGCAGCTGCGGCAACAACTAGAAGCCCC...AAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp CAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTTTTTGCAGGCGGAGCTaGCGGGCCTCTGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: QMCPYIHPSLSAYVRVVAFCRRS*RASACR
Trigger: CCTGCAAGCAGAGGCCCGGCAGCTCCGCCTGCAAAA...AGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp GCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCAAAGGGTAGCAGCCAGGATGTCTTaGTGGACTTGCTGTACCTCC +
Preference number: 4 (lower is better)
Translates to: ACQVSGTLVWLEEYIQRVAARMS*WTCCTS
Trigger: GGAGGTACAGCAAGTCCATCAAGACATCCTGGCTGC...TACCCTTTGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp AAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGCGGAAATCGGCAAACTaGGCCACGTCCTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: KYSQMCPYIHPSLSAYVRRKSAN*ATSCWR
Trigger: CCGCCAGCAGGACGTGGCTCAGTTTGCCGATTTCCG...CCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp ATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGACTGGGCCAGTTCCTCTaGGAGCTGGGTTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: MCPYIHPSLSAYVRVVAGLGQFL*ELGCPC
Trigger: ACAAGGGCAACCCAGCTCTCAGAGGAACTGGCCCAG...TCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp AGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTGGCGGCTCTCTGCCATaGGATTTTCAAACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SAYVRVVAGRQEAHLSFPGGSLP*DFQTGQ
Trigger: CTGCCCAGTTTGAAAATCTCATGGCAGAGAGCCGCC...AGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp GCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCAAAGGGTATCAGCCTGGGTTCTCTaGAGAGCTTTGGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ACQVSGTLVWLEEYIQRVSAWVL*RALVPA
Trigger: AGCTGGGACCAAAGCTCTGCAGAGAACCCAGGCTGA...TACCCTTTGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp TGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTGGTGCATATGCAGAGCCTCATCTaGCTGCATGGCCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: CEGCCWKTGGSSFLSLVHMQSLI*LHGLLN
Trigger: ATTGAGGAGGCCATGCAGCCAGATGAGGCTCTGCAT...ATGCACCAAGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp CACAGGATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACTCTCCTCTTCCAGCTaGGCCACAGCTTGGACACAC +
Preference number: 4 (lower is better)
Translates to: HRMNCLPSFWHSCLVGRVLSSSS*ATAWTH
Trigger: GTGTGTCCAAGCTGTGGCCCAGCTGGAAGAGGAGAG...TACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp TACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGCTCTCCTCTTCCAGCTaGGCCACAGCTTGGACACAC +
Preference number: 4 (lower is better)
Translates to: YIHPSLSAYVRVVAGRQELSSSS*ATAWTH
Trigger: GTGTGTCCAAGCTGTGGCCCAGCTGGAAGAGGAGAG...CTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp TCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCAAGTTCCTCTGAGAGCTaGGTTGCCCTTGTAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SSFTQCICEGCCWKTGGSSSSES*VALVVS
Trigger: GCTGACTACAAGGGCAACCCAGCTCTCAGAGGAACT...TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGGGCGGCTCTCTGCCATaGGATTTTCAAACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKGGSLP*DFQTGQ
Trigger: CTGCCCAGTTTGAAAATCTCATGGCAGAGAGCCGCC...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp TCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCAAGAGCCTCATCTGGCTaGATGGCCTCCTCAATATAC +
Preference number: 4 (lower is better)
Translates to: SSFTQCICEGCCWKTGGSRASSG*MASSIY
Trigger: GTATATTGAGGAGGCCATGCAGCCAGATGAGGCTCT...TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp CACAGGATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTAACAGCTTGGACACACTaGTGGAAACGCCCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: HRMNCLPSFWHSCLVGRVTAWTH*WKRPSS
Trigger: GCTAGAGGGGCGTTTCCAGCAGTGTGTCCAAGCTGT...TACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGCTTGGACACACTaGTGGAAACGCCCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKTAWTH*WKRPSS
Trigger: GCTAGAGGGGCGTTTCCAGCAGTGTGTCCAAGCTGT...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp CAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCATCTCTCTCCAGCTCTaGTTGGGCATGGAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: QCICEGCCWKTGGSSFLSISLQL*LGMELV
Trigger: TACAAGCTCCATGCCCAAGCAGAGCTGGAGAGAGAT...GGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp TCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCAGTCCTGGCGGCTCTCTaGCATGAGATTTTCAAACTG +
Preference number: 4 (lower is better)
Translates to: SSFTQCICEGCCWKTGGSVLAAL*HEIFKL
Trigger: CAGTTTGAAAATCTCATGGCAGAGAGCCGCCAGGAC...TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp ACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTGCTTGGACACACTGCTaGAAACGCCCCTCTAGCAAT +
Preference number: 4 (lower is better)
Translates to: TQCICEGCCWKTGGSSFLAWTHC*KRPSSN
Trigger: ATTGCTAGAGGGGCGTTTCCAGCAGTGTGTCCAAGC...AAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp GATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGTACCTCCTGCAGGGCTaGTTCCCGGAGCAATACAAG +
Preference number: 4 (lower is better)
Translates to: DVSIHSSFTQCICEGCCWYLLQG*FPEQYK
Trigger: CTTGTATTGCTCCGGGAACCAGCCCTGCAGGAGGTA...CCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp GATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGTGCCCATCCCTCTaGCTTGGAGGGGCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: DVSIHSSFTQCICEGCCWKCPSL*LGGASS
Trigger: ACTAGAAGCCCCTCCAAGCCAGAGGGATGGGCACTT...CCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp ACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTGGATCTCAGCCTaGGTTCTCTGCAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: TQCICEGCCWKTGGSSFLSWISA*VLCRAL
Trigger: CAAAGCTCTGCAGAGAACCCAGGCTGAGATCCAGGA...AAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp TGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTGGTGCATTGTGAGGGTTGTTGCTaGAAGACAGGAGGCTCATCT +
Preference number: 4 (lower is better)
Translates to: CEGCCWKTGGSSFLSLVHCEGCC*KTGGSS
Trigger: AGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACA...ATGCACCAAGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp CAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTAGCTCATGGATGAGCTaGTCCCTCTCCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QMCPYIHPSLSAYVRVVASSWMS*SLSSSS
Trigger: GCTGGAAGAGGAGAGGGATCAGCTCATCCATGAGCT...AGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp CACAGGATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTAAATCCAGCAAAGAGTTaGCATGTTCTGCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: HRMNCLPSFWHSCLVGRVNPAKS*HVLPPA
Trigger: GGCCGGAGGCAGAACATGTCAACTCTTTGCTGGATT...TACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp GCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCAAAGGGTACACTCAGTGCATATGTaGGGGTTGTTGCTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: ACQVSGTLVWLEEYIQRVHSVHM*GLLLED
Trigger: GTCTTCCAGCAACAACCCTCACATATGCACTGAGTG...TACCCTTTGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp AGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTAGAGCCTCATCTGGCTaGATGGCCTCCTCAATATAC +
Preference number: 4 (lower is better)
Translates to: SAYVRVVAGRQEAHLSFPRASSG*MASSIY
Trigger: GTATATTGAGGAGGCCATGCAGCCAGATGAGGCTCT...AGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp CATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATCCATGCTGGGGCTCTaGTCGGCTCTGAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HSLKYSQMCPYIHPSLSASMLGL*SALRLS
Trigger: GGAGAGCCTCAGAGCCGAGCAGAGCCCCAGCATGGA...TGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp AAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGGGGCTTCTAGTTGTTaGCGCAGCTGCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KYSQMCPYIHPSLSAYVRGASSC*RSCSFC
Trigger: GCAGAAGGAGCAGCTGCGGCAACAACTAGAAGCCCC...CCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp CACAGGATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACTTTCCTGGAGAAAGTaGCCATCCCTCTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: HRMNCLPSFWHSCLVGRVLSWRK*PSLWLG
Trigger: TCCAAGCCAGAGGGATGGGCACTTTCTCCAGGAAAG...TACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp CTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTGTCCTGGCGGCTCTCTaGCATGAGATTTTCAAACTG +
Preference number: 4 (lower is better)
Translates to: LSAYVRVVAGRQEAHLSFVLAAL*HEIFKL
Trigger: CAGTTTGAAAATCTCATGGCAGAGAGCCGCCAGGAC...AAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp ATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGATCCGATCTGGCTCCGTaGTTTCCTCCACACACACTG +
Preference number: 4 (lower is better)
Translates to: MCPYIHPSLSAYVRVVAGSDLAP*FPPHTL
Trigger: CAGTGTGTGTGGAGGAAACCACGGAGCCAGATCGGA...TCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp CATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCACGTGCTCTGGGCTTGTaGGCTTTCCTGGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: HSLKYSQMCPYIHPSLSARALGL*AFLAPR
Trigger: CCGTGGAGCCAGGAAAGCCCACAAGCCCAGAGCACG...TGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp CTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTATAAACAACGTGCTCTaGGCTTGTGGGCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LSAYVRVVAGRQEAHLSFINNVL*ACGLSW
Trigger: CCAGGAAAGCCCACAAGCCCAGAGCACGTTGTTTAT...AAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp CAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTCTCTGCAGAGCTTTaGTCCCAGCTTCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: QCICEGCCWKTGGSSFLSFSAEL*SQLLSS
Trigger: AGAGGAAAGAAGCTGGGACCAAAGCTCTGCAGAGAA...GGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGTCCTGGATCTCAGCCTaGGTTCTCTGCAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKSWISA*VLCRAL
Trigger: CAAAGCTCTGCAGAGAACCCAGGCTGAGATCCAGGA...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp CAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCGCACTCTTGTCTGGTTaGAAGAGTACATCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: QCICEGCCWKTGGSSFLSALLSG*KSTSKG
Trigger: CCCTTTGGATGTACTCTTCCAACCAGACAAGAGTGC...GGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR CAA 72 bp CAGGTCAGCCAGTATTTGCAACTTCCACAGGATGAATaGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: QVSQYLQLPQDE*LAKFLALLSGW
Trigger: CCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTGGAAGTTGCAAATACTGGCTGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp AAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGAGCTCATGGATGAGCTaGTCCCTCTCCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KYSQMCPYIHPSLSAYVRSSWMS*SLSSSS
Trigger: GCTGGAAGAGGAGAGGGATCAGCTCATCCATGAGCT...CCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp AAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGCAGCCAGGATGTCTTaGTGGACTTGCTGTACCTCC +
Preference number: 4 (lower is better)
Translates to: KYSQMCPYIHPSLSAYVRAARMS*WTCCTS
Trigger: GGAGGTACAGCAAGTCCATCAAGACATCCTGGCTGC...CCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp CAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTAATCCAGCAAAGAGTTaGCATGTTCTGCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: QMCPYIHPSLSAYVRVVANPAKS*HVLPPA
Trigger: GGCCGGAGGCAGAACATGTCAACTCTTTGCTGGATT...AGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp GCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCAAAGGGTAGAAGAGTCCTTCAGATaGCAGTTGTTGTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: ACQVSGTLVWLEEYIQRVEESFR*QLLSMV
Trigger: GACCATGGACAACAACTGTCATCTGAAGGACTCTTC...TACCCTTTGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR GCA 90 bp ACATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCTCAGGTTCTCCTCCATaGTGGGGCTCTGCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: TFFKILPDVSIHSSFTQCSGSPP*WGSARL
Trigger: GAGCCGAGCAGAGCCCCAGCATGGAGGAGAACCTGA...GCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGATCTCTCTCCAGCTCTaGTTGGGCATGGAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKISLQL*LGMELV
Trigger: TACAAGCTCCATGCCCAAGCAGAGCTGGAGAGAGAT...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp ACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTACTTTGAAAAGCTTCTaGTTGACCAGCCGGATCTCC +
Preference number: 4 (lower is better)
Translates to: TQCICEGCCWKTGGSSFLTLKSF*LTSRIS
Trigger: GGAGATCCGGCTGGTCAAGCAGAAGCTTTTCAAAGT...AAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp CAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTCTTCATCTCGTTTTTaGCTCACAAGTGCGATCTGG +
Preference number: 4 (lower is better)
Translates to: QCICEGCCWKTGGSSFLSSSSRF*LTSAIW
Trigger: CCAGATCGCACTTGTGAGGCAAAAACGAGATGAAGA...GGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp TGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTGGTGCATTGTTCCCTGTACTGCTaGACCTCTTCATCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: CEGCCWKTGGSSFLSLVHCSLYC*TSSSRF
Trigger: AAAACGAGATGAAGAGGTGCAGCAGTACAGGGAACA...ATGCACCAAGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp GATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAGCTGTTCCCTGTACTaGTGCACCTCTTCATCTCGT +
Preference number: 4 (lower is better)
Translates to: DVSIHSSFTQCICEGCCWSCSLY*CTSSSR
Trigger: ACGAGATGAAGAGGTGCAGCAGTACAGGGAACAGCT...CCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp CAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTTGTCTCCATTCCACCTaGCTGAGAAGTGGGAGCATC +
Preference number: 4 (lower is better)
Translates to: QMCPYIHPSLSAYVRVVACLHST*LRSGSI
Trigger: GATGCTCCCACTTCTCAGGCAGGTGGAATGGAGACA...AGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CCA 90 bp ACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTGGATCCAGAGTTCTTTaGAAGAGGAGAATTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TQCICEGCCWKTGGSSFLGSRVL*KRRIGL
Trigger: GAGGCCAATTCTCCTCTTCCAAAGAACTCTGGATCC...AAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp GCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCAAAGGGTAGGATCCAGAGTTCTTTaGAAGAGGAGAATTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ACQVSGTLVWLEEYIQRVGSRVL*KRRIGL
Trigger: GAGGCCAATTCTCCTCTTCCAAAGAACTCTGGATCC...TACCCTTTGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp TACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGAAACTGTATCCGATCTaGCTCCGTGGTTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: YIHPSLSAYVRVVAGRQEKLYPI*LRGFLH
Trigger: GTGGAGGAAACCACGGAGCCAGATCGGATACAGTTT...CTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp TTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTCGTGCTCTGGGCTTGTaGGCTTTCCTGGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: FKILPDVSIHSSFTQCICRALGL*AFLAPR
Trigger: CCGTGGAGCCAGGAAAGCCCACAAGCCCAGAGCACG...ACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp TACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGATAAACAACGTGCTCTaGGCTTGTGGGCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: YIHPSLSAYVRVVAGRQEINNVL*ACGLSW
Trigger: CCAGGAAAGCCCACAAGCCCAGAGCACGTTGTTTAT...CTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp CAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGCCTCCTTCATTTCCTaGATCTCAGCCTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: QMCPYIHPSLSAYVRVVAASFIS*ISAWVL
Trigger: GAGAACCCAGGCTGAGATCCAGGAAATGAAGGAGGC...AGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp CTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTGCACTCTTGTCTGGTTaGAAGAGTACATCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LSAYVRVVAGRQEAHLSFALLSG*KSTSKG
Trigger: CCCTTTGGATGTACTCTTCCAACCAGACAAGAGTGC...AAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp AGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTGCTTGCCAAGTTTCTaGCACTCTTGTCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: SAYVRVVAGRQEAHLSFPCLPSF*HSCLVG
Trigger: TCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCA...AGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp GATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGTGTGAGGGTTGTTGCTaGAAGACAGGAGGCTCATCT +
Preference number: 4 (lower is better)
Translates to: DVSIHSSFTQCICEGCCWCEGCC*KTGGSS
Trigger: AGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACA...CCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp TTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTCTGGGCCAGTTCCTCTaGGAGCTGGGTTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: FKILPDVSIHSSFTQCICLGQFL*ELGCPC
Trigger: ACAAGGGCAACCCAGCTCTCAGAGGAACTGGCCCAG...ACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp ATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCAGCTCTTCAGCAAGACTaGGCCTTAGCTGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: MNCLPSFWHSCLVGRVHPALQQD*ALAVPS
Trigger: AGATGGAACAGCTAAGGCTCAGTCTTGCTGAAGAGC...TGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp AGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTGCAACTTCCACAGGATaGATTGCTTGCCAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SAYVRVVAGRQEAHLSFPATSTG*IACQVS
Trigger: AGAAACTTGGCAAGCAATTCATCCTGTGGAAGTTGC...AGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp CAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTCACTCAGTGCATATGTaGGGGTTGTTGCTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: QMCPYIHPSLSAYVRVVAHSVHM*GLLLED
Trigger: GTCTTCCAGCAACAACCCTCACATATGCACTGAGTG...AGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp TTTTCACTGGGGCCTTTACTTAGGTTAGAAATAATAGGCTTTGAAGGCCTCTATTCCATTCCACCTGCCTaGGAAGTGGGAGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: FSLGPLLRLEIIGFEGLYSIPPA*EVGASA
Trigger: GGCTGATGCTCCCACTTCTCAGGCAGGTGGAATGGA...ATAGAGGCCTTCAAAGCCTATTATTTCTAACCTAAGTAAAGGCCCCAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR GCA 90 bp AGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTGTTCCCTGTACTGCTaGACCTCTTCATCTCGTTTT +
Preference number: 4 (lower is better)
Translates to: SAYVRVVAGRQEAHLSFPCSLYC*TSSSRF
Trigger: AAAACGAGATGAAGAGGTGCAGCAGTACAGGGAACA...AGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGAGAGTTGACATGTTCTaGCTCCGGCCAACTCTAGAA +
Preference number: 4 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKRVDMF*LRPTLE
Trigger: TTCTAGAGTTGGCCGGAGGCAGAACATGTCAACTCT...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp CACAGGATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTAATATGTGAGGGTTGTTaGTGGAAGACAGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: HRMNCLPSFWHSCLVGRVICEGC*WKTGGS
Trigger: TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATAT...TACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp GATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGATATGTGAGGGTTGTTaGTGGAAGACAGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: DVSIHSSFTQCICEGCCWICEGC*WKTGGS
Trigger: TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATAT...CCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp ACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCATCCTTCACTCAGTaGATATGTGAGGGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: TQCICEGCCWKTGGSSFLSSFTQ*ICEGCC
Trigger: GCAACAACCCTCACATATGCACTGAGTGAAGGATGA...AAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp AAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGATGCAGAGCCTCATCTaGCTGCATGGCCTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: KYSQMCPYIHPSLSAYVRMQSLI*LHGLLN
Trigger: ATTGAGGAGGCCATGCAGCCAGATGAGGCTCTGCAT...CCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGATGAGATTTTCAAACTaGGCAGAGAGTCGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKMRFSN*AESRRL
Trigger: AAGCCGGCGACTCTCTGCCCAGTTTGAAAATCTCAT...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp CTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTTTTCTTAACTGCCTCTaGCGTTCTTCCATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSAYVRVVAGRQEAHLSFFLNCL*RSSISS
Trigger: GGAGGAAATGGAAGAACGCCAGAGGCAGTTAAGAAA...AAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp GCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCAAAGGGTATCTGGCACTCTTGTCTaGTTGGAAGAGTACATCCAA +
Preference number: 4 (lower is better)
Translates to: ACQVSGTLVWLEEYIQRVSGTLV*LEEYIQ
Trigger: TTGGATGTACTCTTCCAACCAGACAAGAGTGCCAGA...TACCCTTTGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp TACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGTGCTTGCCAAGTTTCTaGCACTCTTGTCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: YIHPSLSAYVRVVAGRQECLPSF*HSCLVG
Trigger: TCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCA...CTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp ATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAATTTCTCCGCCCTTGTaGCTGTCTCTCCCTCATAAA +
Preference number: 4 (lower is better)
Translates to: MCPYIHPSLSAYVRVVAGISPPL*LSLPHK
Trigger: TTTATGAGGGAGAGACAGTCACAAGGGCGGAGAAAT...TCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp CACAGGATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACTTTCCTTGGTGCATTaGGATCAGTATCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: HRMNCLPSFWHSCLVGRVLSLVH*DQYQQQ
Trigger: CTGCTGTTGATACTGATCTCAATGCACCAAGGAAAG...TACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp CAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTTGGAAAAGGTGCTTaGACCTTTTCTCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: QCICEGCCWKTGGSSFLSFGKGA*TFSQRF
Trigger: AAACCTCTGAGAAAAGGTTCAAGCACCTTTTCCAAA...GGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR GCA 90 bp CATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATCAGCCTGGGTTCTCTaGAGAGCTTTGGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: HSLKYSQMCPYIHPSLSASAWVL*RALVPA
Trigger: AGCTGGGACCAAAGCTCTGCAGAGAACCCAGGCTGA...TGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGTTCCACAGGATGAATTaGTTGCCAAGTTTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKFHRMN*LPSFWH
Trigger: GTGCCAGAAACTTGGCAAGCAATTCATCCTGTGGAA...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp ACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTAGGTCAGCCAGTATTTaGAACTTCCACAGGATGAAT +
Preference number: 4 (lower is better)
Translates to: TQCICEGCCWKTGGSSFLRSASI*NFHRMN
Trigger: ATTCATCCTGTGGAAGTTGCAAATACTGGCTGACCT...AAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp TACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGTCATCCTTCACTCAGTaGATATGTGAGGGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: YIHPSLSAYVRVVAGRQESSFTQ*ICEGCC
Trigger: GCAACAACCCTCACATATGCACTGAGTGAAGGATGA...CTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp AGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTTGGAAGAGGAGAATTaGCCTCTACTCTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SAYVRVVAGRQEAHLSFPLEEEN*PLLLFS
Trigger: GGAAAACAAGAGTAGAGGCCAATTCTCCTCTTCCAA...AGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp TTTTCACTGGGGCCTTTACTTAGGTTAGAAATAATAGGCTTTGAAGGCCTCTATTCCGATCTGGCTCCGTaGTTTCCTCCACACACACTG +
Preference number: 4 (lower is better)
Translates to: FSLGPLLRLEIIGFEGLYSDLAP*FPPHTL
Trigger: CAGTGTGTGTGGAGGAAACCACGGAGCCAGATCGGA...ATAGAGGCCTTCAAAGCCTATTATTTCTAACCTAAGTAAAGGCCCCAGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CCA 90 bp AAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGAAACTGTATCCGATCTaGCTCCGTGGTTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KYSQMCPYIHPSLSAYVRKLYPI*LRGFLH
Trigger: GTGGAGGAAACCACGGAGCCAGATCGGATACAGTTT...CCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp CATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCAAAGTGCCCATCCCTCTaGCTTGGAGGGGCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: HSLKYSQMCPYIHPSLSAKCPSL*LGGASS
Trigger: ACTAGAAGCCCCTCCAAGCCAGAGGGATGGGCACTT...TGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp AAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGCTCACAAGTGCGATCTaGTCCTCCAGGTTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: KYSQMCPYIHPSLSAYVRLTSAI*SSRFLF
Trigger: AAACAGGAACCTGGAGGACCAGATCGCACTTGTGAG...CCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp CTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTTTGTTCTTCTGTTGCTaGAGTTGCACCCCATTTCTT +
Preference number: 4 (lower is better)
Translates to: LSAYVRVVAGRQEAHLSFLFFCC*SCTPFL
Trigger: AAGAAATGGGGTGCAACTCCAGCAACAGAAGAACAA...AAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
3UTR CAA 72 bp TCAGCCAGTATTTGCAACTTCCACAGGATGAATTGCTaGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SASICNFHRMNC*PSFWHSCLVGR
Trigger: TCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTGGAAGTTGCAAATACTGGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp AAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGATTTCTCCGCCCTTGTaGCTGTCTCTCCCTCATAAA +
Preference number: 4 (lower is better)
Translates to: KYSQMCPYIHPSLSAYVRISPPL*LSLPHK
Trigger: TTTATGAGGGAGAGACAGTCACAAGGGCGGAGAAAT...CCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp ATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAGCAACTTCCACAGGATaGATTGCTTGCCAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: MCPYIHPSLSAYVRVVAGATSTG*IACQVS
Trigger: AGAAACTTGGCAAGCAATTCATCCTGTGGAAGTTGC...TCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp TCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCAAGTATCAACAGCAGATaGAATAGAATCCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SSFTQCICEGCCWKTGGSSINSR*NRIQQR
Trigger: TCTTTGCTGGATTCTATTTCATCTGCTGTTGATACT...TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp CAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCAGTATCAACAGCAGATaGAATAGAATCCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: QCICEGCCWKTGGSSFLSSINSR*NRIQQR
Trigger: TCTTTGCTGGATTCTATTTCATCTGCTGTTGATACT...GGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp CTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCAGAACTACTTTCATaGGGTAAGATCTTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LSAYVRVVAGRQEAHLSFPELLS*GKIFGK
Trigger: TTTCCCAAAGATCTTACCTCATGAAAGTAGTTCTGG...AAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR TCA 90 bp GATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGCTGAGTAGATCATTCTaGCCCAGAACTACTTTCATG +
Preference number: 4 (lower is better)
Translates to: DVSIHSSFTQCICEGCCWLSRSF*PRTTFM
Trigger: CATGAAAGTAGTTCTGGGTCAGAATGATCTACTCAG...CCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR TCA 90 bp TCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCAAAGGTAACGTTTCTTTaGAGTCTATCTGTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SSFTQCICEGCCWKTGGSKVTFL*SLSVEN
Trigger: GTTCTCTACAGATAGACTTCAAAGAAACGTTACCTT...TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR GCA 90 bp AGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTCTTTCCTTTCCTTGGTaGATTGAGATCAGTATCAAC +
Preference number: 4 (lower is better)
Translates to: SAYVRVVAGRQEAHLSFPLSFPW*IEISIN
Trigger: GTTGATACTGATCTCAATGCACCAAGGAAAGGAAAG...AGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGTTGGAAGAGGAGAATTaGCCTCTACTCTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKLEEEN*PLLLFS
Trigger: GGAAAACAAGAGTAGAGGCCAATTCTCCTCTTCCAA...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp ACATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCCCTCATCTGGCTGCATaGCCTCCTCAATATACAGGG +
Preference number: 4 (lower is better)
Translates to: TFFKILPDVSIHSSFTQCPHLAA*PPQYTG
Trigger: CCCTGTATATTGAGGAGGCCATGCAGCCAGATGAGG...GCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp TTTTCACTGGGGCCTTTACTTAGGTTAGAAATAATAGGCTTTGAAGGCCTCTATGCTTGGACACACTGCTaGAAACGCCCCTCTAGCAAT +
Preference number: 4 (lower is better)
Translates to: FSLGPLLRLEIIGFEGLYAWTHC*KRPSSN
Trigger: ATTGCTAGAGGGGCGTTTCCAGCAGTGTGTCCAAGC...ATAGAGGCCTTCAAAGCCTATTATTTCTAACCTAAGTAAAGGCCCCAGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CCA 90 bp ATTAAATGTAATAGTCCCAGAGCTGTAGAAAAGAACTTTACTCCTTCCCAGGGAGCCTCCTTCATTTCCTaGATCTCAGCCTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: IKCNSPRAVEKNFTPSQGASFIS*ISAWVL
Trigger: GAGAACCCAGGCTGAGATCCAGGAAATGAAGGAGGC...TCCCTGGGAAGGAGTAAAGTTCTTTTCTACAGCTCTGGGACTATTACATTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CCA 90 bp CAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTTCTGGCACTCTTGTCTaGTTGGAAGAGTACATCCAA +
Preference number: 4 (lower is better)
Translates to: QMCPYIHPSLSAYVRVVASGTLV*LEEYIQ
Trigger: TTGGATGTACTCTTCCAACCAGACAAGAGTGCCAGA...AGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp CTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTCAAAAATGTTTTTaGTTTGGGTCAACACAAGGC +
Preference number: 4 (lower is better)
Translates to: LSAYVRVVAGRQEAHLSFPQKCF*FGSTQG
Trigger: GCCTTGTGTTGACCCAAACCAAAAACATTTTTGAGG...AAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CCA 90 bp CAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTTCAAACACCAGTCTCTaGCTTCTAGAAGAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QMCPYIHPSLSAYVRVVASNTSL*LLEESF
Trigger: GAAGGACTCTTCTAGAAGCCAGAGACTGGTGTTTGA...AGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR GCA 90 bp CATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCAAGCTGTTCCCTGTACTaGTGCACCTCTTCATCTCGT +
Preference number: 4 (lower is better)
Translates to: HSLKYSQMCPYIHPSLSASCSLY*CTSSSR
Trigger: ACGAGATGAAGAGGTGCAGCAGTACAGGGAACAGCT...TGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp ATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGGTCAGCCAGTATTTaGAACTTCCACAGGATGAAT +
Preference number: 4 (lower is better)
Translates to: MCPYIHPSLSAYVRVVAGRSASI*NFHRMN
Trigger: ATTCATCCTGTGGAAGTTGCAAATACTGGCTGACCT...TCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp TTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTAGTTCCTCTGAGAGCTaGGTTGCCCTTGTAGTCAGC +
Preference number: 4 (lower is better)
Translates to: FKILPDVSIHSSFTQCICSSSES*VALVVS
Trigger: GCTGACTACAAGGGCAACCCAGCTCTCAGAGGAACT...ACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp ATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCATTGTTCTTCTGTTGCTaGAGTTGCACCCCATTTCTT +
Preference number: 4 (lower is better)
Translates to: MNCLPSFWHSCLVGRVHPLFFCC*SCTPFL
Trigger: AAGAAATGGGGTGCAACTCCAGCAACAGAAGAACAA...TGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp CATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCAATACAAGCTCATGGATaGGCTGATCCCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: HSLKYSQMCPYIHPSLSAIQAHG*ADPSPL
Trigger: AAGAGGAGAGGGATCAGCTCATCCATGAGCTTGTAT...TGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR TCA 90 bp ATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAGGGTCAGCATATCCTTaGACAAAAAGTAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: MCPYIHPSLSAYVRVVAGGSAYP*TKSRLC
Trigger: ACAAAGTCTACTTTTTGTTCAAGGATATGCTGACCC...TCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CCA 90 bp TTTTCACTGGGGCCTTTACTTAGGTTAGAAATAATAGGCTTTGAAGGCCTCTATATGAGATTTTCAAACTaGGCAGAGAGTCGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: FSLGPLLRLEIIGFEGLYMRFSN*AESRRL
Trigger: AAGCCGGCGACTCTCTGCCCAGTTTGAAAATCTCAT...ATAGAGGCCTTCAAAGCCTATTATTTCTAACCTAAGTAAAGGCCCCAGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CCA 90 bp CATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATTCTCTGCAGAGCTTTaGTCCCAGCTTCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HSLKYSQMCPYIHPSLSAFSAEL*SQLLSS
Trigger: AGAGGAAAGAAGCTGGGACCAAAGCTCTGCAGAGAA...TGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp TTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTCTCACAAGTGCGATCTaGTCCTCCAGGTTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: FKILPDVSIHSSFTQCICLTSAI*SSRFLF
Trigger: AAACAGGAACCTGGAGGACCAGATCGCACTTGTGAG...ACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp ATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCAACACTGAATCAGAGGTaGCACAGATTAGTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: MNCLPSFWHSCLVGRVHPTLNQR*HRLVFD
Trigger: ATCAAAGACTAATCTGTGCCACCTCTGATTCAGTGT...TGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR TCA 90 bp ATTAAATGTAATAGTCCCAGAGCTGTAGAAAAGAACTTTACTCCTTCCCAGGGACTTTCCTTGGTGCATTaGGATCAGTATCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: IKCNSPRAVEKNFTPSQGLSLVH*DQYQQQ
Trigger: CTGCTGTTGATACTGATCTCAATGCACCAAGGAAAG...TCCCTGGGAAGGAGTAAAGTTCTTTTCTACAGCTCTGGGACTATTACATTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR GCA 90 bp TTTTCACTGGGGCCTTTACTTAGGTTAGAAATAATAGGCTTTGAAGGCCTCTATTCTTCATCTCGTTTTTaGCTCACAAGTGCGATCTGG +
Preference number: 4 (lower is better)
Translates to: FSLGPLLRLEIIGFEGLYSSSRF*LTSAIW
Trigger: CCAGATCGCACTTGTGAGGCAAAAACGAGATGAAGA...ATAGAGGCCTTCAAAGCCTATTATTTCTAACCTAAGTAAAGGCCCCAGTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR GCA 90 bp ACATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCACCCCATTTCTTAACTaGCTCTGGCGTTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: TFFKILPDVSIHSSFTQCTPFLN*LWRSSI
Trigger: AATGGAAGAACGCCAGAGGCAGTTAAGAAATGGGGT...GCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR GCA 90 bp TTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTACCCCATTTCTTAACTaGCTCTGGCGTTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: FKILPDVSIHSSFTQCICTPFLN*LWRSSI
Trigger: AATGGAAGAACGCCAGAGGCAGTTAAGAAATGGGGT...ACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp TTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTTTTCTTAACTGCCTCTaGCGTTCTTCCATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FKILPDVSIHSSFTQCICFLNCL*RSSISS
Trigger: GGAGGAAATGGAAGAACGCCAGAGGCAGTTAAGAAA...ACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CCA 90 bp CATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCAGACAGTTGTTGTCCATaGTCTTTGACTATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: HSLKYSQMCPYIHPSLSADSCCP*SLTIKS
Trigger: GCTCTTGATAGTCAAAGACCATGGACAACAACTGTC...TGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR TCA 90 bp ACATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCAGAAATAATAGGCTTTaGAGGCCTCTATCACCAGAT +
Preference number: 4 (lower is better)
Translates to: TFFKILPDVSIHSSFTQCRNNRL*RPLSPD
Trigger: ATCTGGTGATAGAGGCCTTCAAAGCCTATTATTTCT...GCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR TCA 90 bp ATTAAATGTAATAGTCCCAGAGCTGTAGAAAAGAACTTTACTCCTTCCCAGGGAAAAGACATAAAACACTaGATCAGAGGTGGCACAGAT +
Preference number: 4 (lower is better)
Translates to: IKCNSPRAVEKNFTPSQGKDIKH*IRGGTD
Trigger: ATCTGTGCCACCTCTGATTCAGTGTTTTATGTCTTT...TCCCTGGGAAGGAGTAAAGTTCTTTTCTACAGCTCTGGGACTATTACATTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR GCA 90 bp ATTAAATGTAATAGTCCCAGAGCTGTAGAAAAGAACTTTACTCCTTCCCAGGGACTTTCCTTTCCTTGGTaGATTGAGATCAGTATCAAC +
Preference number: 4 (lower is better)
Translates to: IKCNSPRAVEKNFTPSQGLSFPW*IEISIN
Trigger: GTTGATACTGATCTCAATGCACCAAGGAAAGGAAAG...TCCCTGGGAAGGAGTAAAGTTCTTTTCTACAGCTCTGGGACTATTACATTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409190.8
3UTR CAA 72 bp CAAAGGGTACTTAGTGATCCTTTGCTAAGAAGTTTTTaGCTGTTTCCGGGTTACAGATTTGGCCATATATTT +
Preference number: 4 (lower is better)
Translates to: QRVLSDPLLRSF*LFPGYRFGHIF
Trigger: AAATATATGGCCAAATCTGTAACCCGGAAACAGCAAAAAACTTCTTAGCAAAGGATCACTAAGTACCCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CCA 90 bp TTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTAAAATGTTTTTGGTTTaGGTCAACACAAGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: FKILPDVSIHSSFTQCICKMFLV*VNTRQD
Trigger: ATCTTGCCTTGTGTTGACCCAAACCAAAAACATTTT...ACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS GCA 90 bp CTGGTCCTCCAGGTTCCTGTTTTGCAGGCGGAGCTGCCGGGCCTCTaGTTGCAGGGGTCTCAGAGCCTCCTTCATTTCCTGGATCTCAGC +
Preference number: 5 (lower is better)
Translates to: LVLQVPVLQAELPGL*LQGSQSLLHFLDLS
Trigger: GCTGAGATCCAGGAAATGAAGGAGGCTCTGAGACCCCTGCAAGCAGAGGCCCGGCAGCTCCGCCTGCAAAACAGGAACCTGGAGGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CCA 90 bp TGGGCAGAGAGTCGCCGGCTTTCCTGGAGAAAGTGCCCATCCCTCTaGCTTGGAGGGGCTTCTAGTTGTTGCCGCAGCTGCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: WAESRRLSWRKCPSL*LGGASSCCRSCSFC
Trigger: GCAGAAGGAGCAGCTGCGGCAACAACTAGAAGCCCCTCCAAGCCAGAGGGATGGGCACTTTCTCCAGGAAAGCCGGCGACTCTCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CCA 90 bp CTGGCTCCACGGGCCCCTCCACAAACTGTATCCGATCTGGCTCCGTaGTTTCCTCCACACACACTGTCTCCTCTGGATTCCCAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: LAPRAPPQTVSDLAP*FPPHTLSPLDSQAP
Trigger: AGGAGCCTGGGAATCCAGAGGAGACAGTGTGTGTGGAGGAAACCACGGAGCCAGATCGGATACAGTTTGTGGAGGGGCCCGTGGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373484.4
ENST00000409190.8
ENST00000417633.1
ENST00000426909.1
CDS TCA 90 bp GTACCTCCTGCAGGGCTGGTTCCCGGAGCAATACAAGCTCATGGATaGGCTGATCCCTCTCCTCTTCCAGCTGGGCCACAGCTTGGACAC +
Preference number: 5 (lower is better)
Translates to: VPPAGLVPGAIQAHG*ADPSPLPAGPQLGH
Trigger: GTGTCCAAGCTGTGGCCCAGCTGGAAGAGGAGAGGGATCAGCTCATCCATGAGCTTGTATTGCTCCGGGAACCAGCCCTGCAGGAGGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS TCA 90 bp CTCCTTCTGCTTCTGATAGGCATCCCGGAGCTGGGCCAGTTCCTCTaGGAGCTGGGTTGCCCTTGTAGTCAGCACTTCCCGGAAATCGGC +
Preference number: 5 (lower is better)
Translates to: LLLLLIGIPELGQFL*ELGCPCSQHFPEIG
Trigger: GCCGATTTCCGGGAAGTGCTGACTACAAGGGCAACCCAGCTCTCAGAGGAACTGGCCCAGCTCCGGGATGCCTATCAGAAGCAGAAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS TCA 90 bp AGAGCTTTGGTCCCAGCTTCTTTCCTCTCTAGGAGCCGCAGGAACTaGGGCTCATACTCCTCCTCCAGGTCCTGGCGGCTCTCTGCCATG +
Preference number: 5 (lower is better)
Translates to: RALVPASFLSRSRRN*GSYSSSRSWRLSAM
Trigger: CATGGCAGAGAGCCGCCAGGACCTGGAGGAGGAGTATGAGCCTCAGTTCCTGCGGCTCCTAGAGAGGAAAGAAGCTGGGACCAAAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CCA 90 bp TCCTCCTCCAGGTCCTGGCGGCTCTCTGCCATGAGATTTTCAAACTaGGCAGAGAGTCGCCGGCTTTCCTGGAGAAAGTGCCCATCCCTC +
Preference number: 5 (lower is better)
Translates to: SSSRSWRLSAMRFSN*AESRRLSWRKCPSL
Trigger: GAGGGATGGGCACTTTCTCCAGGAAAGCCGGCGACTCTCTGCCCAGTTTGAAAATCTCATGGCAGAGAGCCGCCAGGACCTGGAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS GCA 90 bp TCCTCTGGATTCCCAGGCTCCTCCACATGCAGAGCCTCATCTGGCTaGATGGCCTCCTCAATATACAGGGCCTCCTCTGCCTTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: SSGFPGSSTCRASSG*MASSIYRASSAFSV
Trigger: GACTGAGAAGGCAGAGGAGGCCCTGTATATTGAGGAGGCCATGCAGCCAGATGAGGCTCTGCATGTGGAGGAGCCTGGGAATCCAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373484.4
ENST00000409190.8
ENST00000417633.1
ENST00000426909.1
CDS GCA 90 bp TCCTCCACACACACTGTCTCCTCTGGATTCCCAGGCTCCTCCACATaGAGAGCCTCATCTGGCTGCATGGCCTCCTCAATATACAGGGCC +
Preference number: 5 (lower is better)
Translates to: SSTHTVSSGFPGSST*RASSGCMASSIYRA
Trigger: GGCCCTGTATATTGAGGAGGCCATGCAGCCAGATGAGGCTCTGCATGTGGAGGAGCCTGGGAATCCAGAGGAGACAGTGTGTGTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373484.4
ENST00000409190.8
ENST00000417633.1
ENST00000426909.1
CDS CCA 90 bp TGTCTCTCCCTCATAAACAACGTGCTCTGGGCTTGTGGGCTTTCCTaGCTCCACGGGCCCCTCCACAAACTGTATCCGATCTGGCTCCGT +
Preference number: 5 (lower is better)
Translates to: CLSLINNVLWACGLS*LHGPLHKLYPIWLR
Trigger: ACGGAGCCAGATCGGATACAGTTTGTGGAGGGGCCCGTGGAGCCAGGAAAGCCCACAAGCCCAGAGCACGTTGTTTATGAGGGAGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373484.4
ENST00000409190.8
ENST00000417633.1
ENST00000426909.1
CDS CCA 90 bp TTTCTCCGCCCTTGTGACTGTCTCTCCCTCATAAACAACGTGCTCTaGGCTTGTGGGCTTTCCTGGCTCCACGGGCCCCTCCACAAACTG +
Preference number: 5 (lower is better)
Translates to: FLRPCDCLSLINNVL*ACGLSWLHGPLHKL
Trigger: CAGTTTGTGGAGGGGCCCGTGGAGCCAGGAAAGCCCACAAGCCCAGAGCACGTTGTTTATGAGGGAGAGACAGTCACAAGGGCGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373484.4
ENST00000409190.8
ENST00000417633.1
ENST00000426909.1
CDS TCA 90 bp ACTGAGGCTCATACTCCTCCTCCAGGTCCTGGCGGCTCTCTGCCATaGGATTTTCAAACTGGGCAGAGAGTCGCCGGCTTTCCTGGAGAA +
Preference number: 5 (lower is better)
Translates to: TEAHTPPPGPGGSLP*DFQTGQRVAGFPGE
Trigger: TTCTCCAGGAAAGCCGGCGACTCTCTGCCCAGTTTGAAAATCTCATGGCAGAGAGCCGCCAGGACCTGGAGGAGGAGTATGAGCCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS GCA 90 bp AGATTTTCAAACTGGGCAGAGAGTCGCCGGCTTTCCTGGAGAAAGTaGCCATCCCTCTGGCTTGGAGGGGCTTCTAGTTGTTGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: RFSNWAESRRLSWRK*PSLWLGGASSCCRS
Trigger: GCTGCGGCAACAACTAGAAGCCCCTCCAAGCCAGAGGGATGGGCACTTTCTCCAGGAAAGCCGGCGACTCTCTGCCCAGTTTGAAAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS GCA 90 bp GGTCTCAGAGCCTCCTTCATTTCCTGGATCTCAGCCTGGGTTCTCTaGAGAGCTTTGGTCCCAGCTTCTTTCCTCTCTAGGAGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: GLRASFISWISAWVL*RALVPASFLSRSRR
Trigger: CCTGCGGCTCCTAGAGAGGAAAGAAGCTGGGACCAAAGCTCTGCAGAGAACCCAGGCTGAGATCCAGGAAATGAAGGAGGCTCTGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CCA 90 bp CTGGATTCCCAGGCTCCTCCACATGCAGAGCCTCATCTGGCTGCATaGCCTCCTCAATATACAGGGCCTCCTCTGCCTTCTCAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: LDSQAPPHAEPHLAA*PPQYTGPPLPSQSL
Trigger: AAGAGACTGAGAAGGCAGAGGAGGCCCTGTATATTGAGGAGGCCATGCAGCCAGATGAGGCTCTGCATGTGGAGGAGCCTGGGAATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373484.4
ENST00000409190.8
ENST00000417633.1
ENST00000426909.1
CDS CCA 90 bp GGCAGCCAGGATGTCTTGATGGACTTGCTGTACCTCCTGCAGGGCTaGTTCCCGGAGCAATACAAGCTCATGGATGAGCTGATCCCTCTC +
Preference number: 5 (lower is better)
Translates to: GSQDVLMDLLYLLQG*FPEQYKLMDELIPL
Trigger: GAGAGGGATCAGCTCATCCATGAGCTTGTATTGCTCCGGGAACCAGCCCTGCAGGAGGTACAGCAAGTCCATCAAGACATCCTGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CCA 90 bp TACTGCTGCACCTCTTCATCTCGTTTTTGCCTCACAAGTGCGATCTaGTCCTCCAGGTTCCTGTTTTGCAGGCGGAGCTGCCGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: YCCTSSSRFCLTSAI*SSRFLFCRRSCRAS
Trigger: AGAGGCCCGGCAGCTCCGCCTGCAAAACAGGAACCTGGAGGACCAGATCGCACTTGTGAGGCAAAAACGAGATGAAGAGGTGCAGCAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS GCA 90 bp TTCCCTGTACTGCTGCACCTCTTCATCTCGTTTTTGCCTCACAAGTaGGATCTGGTCCTCCAGGTTCCTGTTTTGCAGGCGGAGCTGCCG +
Preference number: 5 (lower is better)
Translates to: FPVLLHLFISFLPHK*DLVLQVPVLQAELP
Trigger: CGGCAGCTCCGCCTGCAAAACAGGAACCTGGAGGACCAGATCGCACTTGTGAGGCAAAAACGAGATGAAGAGGTGCAGCAGTACAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CCA 90 bp CCTCCTTCATTTCCTGGATCTCAGCCTGGGTTCTCTGCAGAGCTTTaGTCCCAGCTTCTTTCCTCTCTAGGAGCCGCAGGAACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: PPSFPGSQPGFSAEL*SQLLSSLGAAGTEA
Trigger: AGCCTCAGTTCCTGCGGCTCCTAGAGAGGAAAGAAGCTGGGACCAAAGCTCTGCAGAGAACCCAGGCTGAGATCCAGGAAATGAAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp ACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTCTCCAGGTTCCTGTTTaGCAGGCGGAGCTGCCGGGC +
Preference number: 5 (lower is better)
Translates to: TQCICEGCCWKTGGSSFLLQVPV*QAELPG
Trigger: GCCCGGCAGCTCCGCCTGCAAAACAGGAACCTGGAG...AAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp AGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTCAACGTGCTCTGGGCTaGTGGGCTTTCCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: SAYVRVVAGRQEAHLSFPQRALG*WAFLAP
Trigger: TGGAGCCAGGAAAGCCCACAAGCCCAGAGCACGTTG...AGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGCAACGTGCTCTGGGCTaGTGGGCTTTCCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKQRALG*WAFLAP
Trigger: TGGAGCCAGGAAAGCCCACAAGCCCAGAGCACGTTG...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp TCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCAGGCAGCCAGGATGTCTaGATGGACTTGCTGTACCTC +
Preference number: 5 (lower is better)
Translates to: SSFTQCICEGCCWKTGGSGSQDV*MDLLYL
Trigger: GAGGTACAGCAAGTCCATCAAGACATCCTGGCTGCC...TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp TCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCAGCACTCCAGCTGGTATaGGTAGGCCACACATTCCTT +
Preference number: 5 (lower is better)
Translates to: SSFTQCICEGCCWKTGGSALQLV*VGHTFL
Trigger: AAGGAATGTGTGGCCTACCAATACCAGCTGGAGTGC...TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp TCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCAGCCTGTTCCAGGCTCTaGGGTAGTAGCATAGCCTTA +
Preference number: 5 (lower is better)
Translates to: SSFTQCICEGCCWKTGGSACSRL*GSSIAL
Trigger: TAAGGCTATGCTACTACCCAAGAGCCTGGAACAGGC...TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CAA 90 bp CTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTTTGAAAAGCTTCTGCTaGACCAGCCGGATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSAYVRVVAGRQEAHLSFLKSFC*TSRISS
Trigger: GGAGGAGATCCGGCTGGTCAAGCAGAAGCTTTTCAA...AAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp GCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCAAAGGGTAGCACTCCAGCTGGTATaGGTAGGCCACACATTCCTT +
Preference number: 5 (lower is better)
Translates to: ACQVSGTLVWLEEYIQRVALQLV*VGHTFL
Trigger: AAGGAATGTGTGGCCTACCAATACCAGCTGGAGTGC...TACCCTTTGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp CAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGCCCATCCCTCTGGCTaGGAGGGGCTTCTAGTTGTT +
Preference number: 5 (lower is better)
Translates to: QMCPYIHPSLSAYVRVVAAHPSG*EGLLVV
Trigger: AACAACTAGAAGCCCCTCCAAGCCAGAGGGATGGGC...AGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp ACATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCCTCCAGGTTCCTGTTTaGCAGGCGGAGCTGCCGGGC +
Preference number: 5 (lower is better)
Translates to: TFFKILPDVSIHSSFTQCLQVPV*QAELPG
Trigger: GCCCGGCAGCTCCGCCTGCAAAACAGGAACCTGGAG...GCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp TGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTGGTGCATGGCACTCTTGTCTGGTaGGAAGAGTACATCCAAAGG +
Preference number: 5 (lower is better)
Translates to: CEGCCWKTGGSSFLSLVHGTLVW*EEYIQR
Trigger: CCTTTGGATGTACTCTTCCAACCAGACAAGAGTGCC...ATGCACCAAGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp AGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTGAATCCAGCAAAGAGTaGACATGTTCTGCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: SAYVRVVAGRQEAHLSFPESSKE*TCSASG
Trigger: GCCGGAGGCAGAACATGTCAACTCTTTGCTGGATTC...AGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp ATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCAAATTGGCCTCTACTCTaGTTTTCCTCGCGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: MNCLPSFWHSCLVGRVHPNWPLL*FSSRPG
Trigger: CCCAGGCCGCGAGGAAAACAAGAGTAGAGGCCAATT...TGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp AAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGCCCATCCCTCTGGCTaGGAGGGGCTTCTAGTTGTT +
Preference number: 5 (lower is better)
Translates to: KYSQMCPYIHPSLSAYVRAHPSG*EGLLVV
Trigger: AACAACTAGAAGCCCCTCCAAGCCAGAGGGATGGGC...CCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp GATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGGTTCTCTGCAGAGCTTaGGTCCCAGCTTCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: DVSIHSSFTQCICEGCCWVLCRA*VPASFL
Trigger: GAGGAAAGAAGCTGGGACCAAAGCTCTGCAGAGAAC...CCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp CACAGGATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTAGTTCTCTGCAGAGCTTaGGTCCCAGCTTCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: HRMNCLPSFWHSCLVGRVVLCRA*VPASFL
Trigger: GAGGAAAGAAGCTGGGACCAAAGCTCTGCAGAGAAC...TACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp TCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCACTTCCACAGGATGAATaGCTTGCCAAGTTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: SSFTQCICEGCCWKTGGSLPQDE*LAKFLA
Trigger: TGCCAGAAACTTGGCAAGCAATTCATCCTGTGGAAG...TGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp GATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGGAATCCAGCAAAGAGTaGACATGTTCTGCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: DVSIHSSFTQCICEGCCWESSKE*TCSASG
Trigger: GCCGGAGGCAGAACATGTCAACTCTTTGCTGGATTC...CCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp AAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGAATTGGCCTCTACTCTaGTTTTCCTCGCGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: KYSQMCPYIHPSLSAYVRNWPLL*FSSRPG
Trigger: CCCAGGCCGCGAGGAAAACAAGAGTAGAGGCCAATT...CCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp AGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTGCCTTCTCAGTCTCTaGCACATAGAGTGTCTCATC +
Preference number: 5 (lower is better)
Translates to: SAYVRVVAGRQEAHLSFPCLLSL*HIECLI
Trigger: GATGAGACACTCTATGTGCAAGAGACTGAGAAGGCA...AGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGGGCACTCTTGTCTGGTaGGAAGAGTACATCCAAAGG +
Preference number: 5 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKGTLVW*EEYIQR
Trigger: CCTTTGGATGTACTCTTCCAACCAGACAAGAGTGCC...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp TGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTGGTGCATCCTTTCCTTGGTGCATaGAGATCAGTATCAACAGCA +
Preference number: 5 (lower is better)
Translates to: CEGCCWKTGGSSFLSLVHPFLGA*RSVSTA
Trigger: TGCTGTTGATACTGATCTCAATGCACCAAGGAAAGG...ATGCACCAAGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp GATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGCTCTTCATCTCGTTTTaGCCTCACAAGTGCGATCTG +
Preference number: 5 (lower is better)
Translates to: DVSIHSSFTQCICEGCCWLFISF*PHKCDL
Trigger: CAGATCGCACTTGTGAGGCAAAAACGAGATGAAGAG...CCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp AGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTCCTTTCCTTGGTGCATaGAGATCAGTATCAACAGCA +
Preference number: 5 (lower is better)
Translates to: SAYVRVVAGRQEAHLSFPPFLGA*RSVSTA
Trigger: TGCTGTTGATACTGATCTCAATGCACCAAGGAAAGG...AGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACATATGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp GTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGTTTCTAAACAGCCCCTaGAGACTGTGTCTCCATTCC +
Preference number: 5 (lower is better)
Translates to: VSIHSSFTQCICEGCCWKFLNSP*RLCLHS
Trigger: GGAATGGAGACACAGTCTCAAGGGGCTGTTTAGAAA...CTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CAA 90 bp GCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCAAAGGGTATTTGGAAGAGGAGAATaGGCCTCTACTCTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: ACQVSGTLVWLEEYIQRVFGRGE*ASTLVF
Trigger: GAAAACAAGAGTAGAGGCCAATTCTCCTCTTCCAAA...TACCCTTTGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp ACATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCGATGTCTTGATGGACTaGCTGTACCTCCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: TFFKILPDVSIHSSFTQCDVLMD*LYLLQG
Trigger: GCCCTGCAGGAGGTACAGCAAGTCCATCAAGACATC...GCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp TTTTCACTGGGGCCTTTACTTAGGTTAGAAATAATAGGCTTTGAAGGCCTCTATGGCAGCCAGGATGTCTaGATGGACTTGCTGTACCTC +
Preference number: 5 (lower is better)
Translates to: FSLGPLLRLEIIGFEGLYGSQDV*MDLLYL
Trigger: GAGGTACAGCAAGTCCATCAAGACATCCTGGCTGCC...ATAGAGGCCTTCAAAGCCTATTATTTCTAACCTAAGTAAAGGCCCCAGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CAA 90 bp TACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGACAGGAGAAGTTTCTGGCACTCTaGTCTGGTTGGAAGAGTACA +
Preference number: 5 (lower is better)
Translates to: YIHPSLSAYVRVVAGRQEKFLAL*SGWKST
Trigger: TGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTT...CTCCTGTCTTCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp ATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCACAGGTCAGCCAGTATTaGCAACTTCCACAGGATGAA +
Preference number: 5 (lower is better)
Translates to: MNCLPSFWHSCLVGRVHPQVSQY*QLPQDE
Trigger: TTCATCCTGTGGAAGTTGCAAATACTGGCTGACCTG...TGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp GATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGTTTGGAAGAGGAGAATaGGCCTCTACTCTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: DVSIHSSFTQCICEGCCWFGRGE*ASTLVF
Trigger: GAAAACAAGAGTAGAGGCCAATTCTCCTCTTCCAAA...CCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp ACATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCTTGAAAAGCTTCTGCTaGACCAGCCGGATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TFFKILPDVSIHSSFTQCLKSFC*TSRISS
Trigger: GGAGGAGATCCGGCTGGTCAAGCAGAAGCTTTTCAA...GCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp ATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGAAGCTGTTCCATCTCTTaGTTCTTCTGTTGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: MCPYIHPSLSAYVRVVAGSCSIS*FFCCWS
Trigger: ACTCCAGCAACAGAAGAACAAAGAGATGGAACAGCT...TCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp CAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTAAGTTTCTGGCACTCTaGTCTGGTTGGAAGAGTACA +
Preference number: 5 (lower is better)
Translates to: QMCPYIHPSLSAYVRVVAKFLAL*SGWKST
Trigger: TGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTT...AGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp AAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGCACAGGATGAATTGCTaGCCAAGTTTCTGGCACTCT +
Preference number: 5 (lower is better)
Translates to: KYSQMCPYIHPSLSAYVRHRMNC*PSFWHS
Trigger: AGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTG...CCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp TGTGAGGGTTGTTGCTGGAAGACAGGAGGCTCATCTTTCCTTTCCTTGGTGCATAGGCAAGATTTAAATTaGGAAAAGGTGCTTGAACCT +
Preference number: 5 (lower is better)
Translates to: CEGCCWKTGGSSFLSLVHRQDLN*EKVLEP
Trigger: AGGTTCAAGCACCTTTTCCAAATTTAAATCTTGCCT...ATGCACCAAGGAAAGGAAAGATGAGCCTCCTGTCTTCCAGCAACAACCCTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CAA 90 bp AAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGAGCTGTTCCATCTCTTaGTTCTTCTGTTGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: KYSQMCPYIHPSLSAYVRSCSIS*FFCCWS
Trigger: ACTCCAGCAACAGAAGAACAAAGAGATGGAACAGCT...CCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp TTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGGGATCCAGAGTTCTTaGGAAGAGGAGAATTGGCCT +
Preference number: 5 (lower is better)
Translates to: FKILPDVSIHSSFTQCICGIQSS*EEENWP
Trigger: AGGCCAATTCTCCTCTTCCAAAGAACTCTGGATCCC...ACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp CATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATGCCTTCTCAGTCTCTaGCACATAGAGTGTCTCATC +
Preference number: 5 (lower is better)
Translates to: HSLKYSQMCPYIHPSLSACLLSL*HIECLI
Trigger: GATGAGACACTCTATGTGCAAGAGACTGAGAAGGCA...TGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp CATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCACTCTTCATCTCGTTTTaGCCTCACAAGTGCGATCTG +
Preference number: 5 (lower is better)
Translates to: HSLKYSQMCPYIHPSLSALFISF*PHKCDL
Trigger: CAGATCGCACTTGTGAGGCAAAAACGAGATGAAGAG...TGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp ACATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCCTCTTTGTTCTTCTGTaGCTGGAGTTGCACCCCATT +
Preference number: 5 (lower is better)
Translates to: TFFKILPDVSIHSSFTQCLFVLL*LELHPI
Trigger: AATGGGGTGCAACTCCAGCAACAGAAGAACAAAGAG...GCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp CAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTTTGCTAAGAAGTTTTTaGCTGTTTCCGGGTTACAGA +
Preference number: 5 (lower is better)
Translates to: QMCPYIHPSLSAYVRVVALLRSF*LFPGYR
Trigger: TCTGTAACCCGGAAACAGCAAAAAACTTCTTAGCAA...AGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp ACATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCCACAGGATGAATTGCTaGCCAAGTTTCTGGCACTCT +
Preference number: 5 (lower is better)
Translates to: TFFKILPDVSIHSSFTQCHRMNC*PSFWHS
Trigger: AGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTG...GCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp ACATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCCTTCCACAGGATGAATaGCTTGCCAAGTTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: TFFKILPDVSIHSSFTQCLPQDE*LAKFLA
Trigger: TGCCAGAAACTTGGCAAGCAATTCATCCTGTGGAAG...GCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp CACAGGATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTAAAAAATGTTTTTGGTTaGGGTCAACACAAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: HRMNCLPSFWHSCLVGRVKNVFG*GQHKAR
Trigger: TCTTGCCTTGTGTTGACCCAAACCAAAAACATTTTT...TACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCATCCTGTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CAA 90 bp ATGAATTGCTTGCCAAGTTTCTGGCACTCTTGTCTGGTTGGAAGAGTACATCCAATTTGGAAAAGGTGCTaGAACCTTTTCTCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: MNCLPSFWHSCLVGRVHPIWKRC*NLFSEV
Trigger: AACCTCTGAGAAAAGGTTCAAGCACCTTTTCCAAAT...TGGATGTACTCTTCCAACCAGACAAGAGTGCCAGAAACTTGGCAAGCAATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CAA 90 bp ATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTGAGGGTTGTTGCTGGATGTTGTCCATGGTCTTaGACTATCAAGAGCAGAATT +
Preference number: 5 (lower is better)
Translates to: MCPYIHPSLSAYVRVVAGCCPWS*TIKSRI
Trigger: AATTCTGCTCTTGATAGTCAAAGACCATGGACAACA...TCCAGCAACAACCCTCACATATGCACTGAGTGAAGGATGAATGTATGGACACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CAA 90 bp TTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTCTCTTTGTTCTTCTGTaGCTGGAGTTGCACCCCATT +
Preference number: 5 (lower is better)
Translates to: FKILPDVSIHSSFTQCICLFVLL*LELHPI
Trigger: AATGGGGTGCAACTCCAGCAACAGAAGAACAAAGAG...ACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp TTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCATATGTCAGGTCAGCCAGTATTaGCAACTTCCACAGGATGAA +
Preference number: 5 (lower is better)
Translates to: FKILPDVSIHSSFTQCICQVSQY*QLPQDE
Trigger: TTCATCCTGTGGAAGTTGCAAATACTGGCTGACCTG...ACATATGCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS-3UTR CAA 90 bp ATTAAATGTAATAGTCCCAGAGCTGTAGAAAAGAACTTTACTCCTTCCCAGGGACCCTCAAAAATGTTTTaGGTTTGGGTCAACACAAGG +
Preference number: 5 (lower is better)
Translates to: IKCNSPRAVEKNFTPSQGPSKMF*VWVNTR
Trigger: CCTTGTGTTGACCCAAACCAAAAACATTTTTGAGGG...TCCCTGGGAAGGAGTAAAGTTCTTTTCTACAGCTCTGGGACTATTACATTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409190.8
CDS-3UTR CAA 90 bp ACATTCTTTAAAATACTCCCAGATGTGTCCATACATTCATCCTTCACTCAGTGCTTGCTAAGAAGTTTTTaGCTGTTTCCGGGTTACAGA +
Preference number: 5 (lower is better)
Translates to: TFFKILPDVSIHSSFTQCLLRSF*LFPGYR
Trigger: TCTGTAACCCGGAAACAGCAAAAAACTTCTTAGCAA...GCACTGAGTGAAGGATGAATGTATGGACACATCTGGGAGTATTTTAAAGAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS GCA 72 bp CTCACAAGTGCGATCTGGTCCTCCAGGTTCCTGTTTTaGAGGCGGAGCTGCCGGGCCTCTGCTTGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: LTSAIWSSRFLF*RRSCRASACRG
Trigger: ACCCCTGCAAGCAGAGGCCCGGCAGCTCCGCCTGCAAAACAGGAACCTGGAGGACCAGATCGCACTTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CAA 90 bp GTCCTCCAGGTTCCTGTTTTGCAGGCGGAGCTGCCGGGCCTCTGCTaGCAGGGGTCTCAGAGCCTCCTTCATTTCCTGGATCTCAGCCTG +
Preference number: 6 (lower is better)
Translates to: VLQVPVLQAELPGLC*QGSQSLLHFLDLSL
Trigger: CAGGCTGAGATCCAGGAAATGAAGGAGGCTCTGAGACCCCTGCAAGCAGAGGCCCGGCAGCTCCGCCTGCAAAACAGGAACCTGGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS GCA 72 bp CAGGTTCCTGTTTTGCAGGCGGAGCTGCCGGGCCTCTaGTTGCAGGGGTCTCAGAGCCTCCTTCATTTCCTG +
Preference number: 6 (lower is better)
Translates to: QVPVLQAELPGL*LQGSQSLLHFL
Trigger: CAGGAAATGAAGGAGGCTCTGAGACCCCTGCAAGCAGAGGCCCGGCAGCTCCGCCTGCAAAACAGGAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CCA 72 bp AGTCGCCGGCTTTCCTGGAGAAAGTGCCCATCCCTCTaGCTTGGAGGGGCTTCTAGTTGTTGCCGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SRRLSWRKCPSL*LGGASSCCRSC
Trigger: GCAGCTGCGGCAACAACTAGAAGCCCCTCCAAGCCAGAGGGATGGGCACTTTCTCCAGGAAAGCCGGCGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CAA 72 bp GCCGGCTTTCCTGGAGAAAGTGCCCATCCCTCTGGCTaGGAGGGGCTTCTAGTTGTTGCCGCAGCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: AGFPGESAHPSG*EGLLVVAAAAP
Trigger: AGGAGCAGCTGCGGCAACAACTAGAAGCCCCTCCAAGCCAGAGGGATGGGCACTTTCTCCAGGAAAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS TCA 72 bp GCAGGGCTGGTTCCCGGAGCAATACAAGCTCATGGATaGGCTGATCCCTCTCCTCTTCCAGCTGGGCCACAG +
Preference number: 6 (lower is better)
Translates to: AGLVPGAIQAHG*ADPSPLPAGPQ
Trigger: CTGTGGCCCAGCTGGAAGAGGAGAGGGATCAGCTCATCCATGAGCTTGTATTGCTCCGGGAACCAGCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS GCA 72 bp TTCCCAGGCTCCTCCACATGCAGAGCCTCATCTGGCTaGATGGCCTCCTCAATATACAGGGCCTCCTCTGCC +
Preference number: 6 (lower is better)
Translates to: FPGSSTCRASSG*MASSIYRASSA
Trigger: GGCAGAGGAGGCCCTGTATATTGAGGAGGCCATGCAGCCAGATGAGGCTCTGCATGTGGAGGAGCCTGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373484.4
ENST00000409190.8
ENST00000417633.1
ENST00000426909.1
CDS CCA 72 bp CCTTGTGACTGTCTCTCCCTCATAAACAACGTGCTCTaGGCTTGTGGGCTTTCCTGGCTCCACGGGCCCCTC +
Preference number: 6 (lower is better)
Translates to: PCDCLSLINNVL*ACGLSWLHGPL
Trigger: GAGGGGCCCGTGGAGCCAGGAAAGCCCACAAGCCCAGAGCACGTTGTTTATGAGGGAGAGACAGTCACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373484.4
ENST00000409190.8
ENST00000417633.1
ENST00000426909.1
CDS CAA 90 bp CTCCAGCTCTGCTTGGGCATGGAGCTTGTAGGCAGCCAGGATGTCTaGATGGACTTGCTGTACCTCCTGCAGGGCTGGTTCCCGGAGCAA +
Preference number: 6 (lower is better)
Translates to: LQLCLGMELVGSQDV*MDLLYLLQGWFPEQ
Trigger: TTGCTCCGGGAACCAGCCCTGCAGGAGGTACAGCAAGTCCATCAAGACATCCTGGCTGCCTACAAGCTCCATGCCCAAGCAGAGCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CAA 90 bp CAGAGAGTCGCCGGCTTTCCTGGAGAAAGTGCCCATCCCTCTGGCTaGGAGGGGCTTCTAGTTGTTGCCGCAGCTGCTCCTTCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: QRVAGFPGESAHPSG*EGLLVVAAAAPSAS
Trigger: AGAAGCAGAAGGAGCAGCTGCGGCAACAACTAGAAGCCCCTCCAAGCCAGAGGGATGGGCACTTTCTCCAGGAAAGCCGGCGACTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS GCA 72 bp CTCTCCTCTTCCAGCTGGGCCACAGCTTGGACACACTaGTGGAAACGCCCCTCTAGCAATTCCAGGTCCTCT +
Preference number: 6 (lower is better)
Translates to: LSSSSWATAWTH*WKRPSSNSRSS
Trigger: AGAGGACCTGGAATTGCTAGAGGGGCGTTTCCAGCAGTGTGTCCAAGCTGTGGCCCAGCTGGAAGAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS GCA 72 bp AACTGGGCAGAGAGTCGCCGGCTTTCCTGGAGAAAGTaGCCATCCCTCTGGCTTGGAGGGGCTTCTAGTTGT +
Preference number: 6 (lower is better)
Translates to: NWAESRRLSWRK*PSLWLGGASSC
Trigger: ACAACTAGAAGCCCCTCCAAGCCAGAGGGATGGGCACTTTCTCCAGGAAAGCCGGCGACTCTCTGCCCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS GCA 72 bp AGGCTCATACTCCTCCTCCAGGTCCTGGCGGCTCTCTaGCATGAGATTTTCAAACTGGGCAGAGAGTCGCCG +
Preference number: 6 (lower is better)
Translates to: RLILLLQVLAAL*HEIFKLGRESP
Trigger: CGGCGACTCTCTGCCCAGTTTGAAAATCTCATGGCAGAGAGCCGCCAGGACCTGGAGGAGGAGTATGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CCA 72 bp CAGGCTCCTCCACATGCAGAGCCTCATCTGGCTGCATaGCCTCCTCAATATACAGGGCCTCCTCTGCCTTCT +
Preference number: 6 (lower is better)
Translates to: QAPPHAEPHLAA*PPQYTGPPLPS
Trigger: AGAAGGCAGAGGAGGCCCTGTATATTGAGGAGGCCATGCAGCCAGATGAGGCTCTGCATGTGGAGGAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373484.4
ENST00000409190.8
ENST00000417633.1
ENST00000426909.1
CDS CAA 90 bp TGCTTGGGCATGGAGCTTGTAGGCAGCCAGGATGTCTTGATGGACTaGCTGTACCTCCTGCAGGGCTGGTTCCCGGAGCAATACAAGCTC +
Preference number: 6 (lower is better)
Translates to: CLGMELVGSQDVLMD*LYLLQGWFPEQYKL
Trigger: GAGCTTGTATTGCTCCGGGAACCAGCCCTGCAGGAGGTACAGCAAGTCCATCAAGACATCCTGGCTGCCTACAAGCTCCATGCCCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS TCA 72 bp CATACTCCTCCTCCAGGTCCTGGCGGCTCTCTGCCATaGGATTTTCAAACTGGGCAGAGAGTCGCCGGCTTT +
Preference number: 6 (lower is better)
Translates to: HTPPPGPGGSLP*DFQTGQRVAGF
Trigger: AAAGCCGGCGACTCTCTGCCCAGTTTGAAAATCTCATGGCAGAGAGCCGCCAGGACCTGGAGGAGGAGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CCA 72 bp CTCATAAACAACGTGCTCTGGGCTTGTGGGCTTTCCTaGCTCCACGGGCCCCTCCACAAACTGTATCCGATC +
Preference number: 6 (lower is better)
Translates to: LINNVLWACGLS*LHGPLHKLYPI
Trigger: GATCGGATACAGTTTGTGGAGGGGCCCGTGGAGCCAGGAAAGCCCACAAGCCCAGAGCACGTTGTTTATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373484.4
ENST00000409190.8
ENST00000417633.1
ENST00000426909.1
CDS CCA 72 bp TCCTCTTCCAGCTGGGCCACAGCTTGGACACACTGCTaGAAACGCCCCTCTAGCAATTCCAGGTCCTCTATG +
Preference number: 6 (lower is better)
Translates to: SSSSWATAWTHC*KRPSSNSRSSM
Trigger: CATAGAGGACCTGGAATTGCTAGAGGGGCGTTTCCAGCAGTGTGTCCAAGCTGTGGCCCAGCTGGAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CCA 72 bp AGGTCCTGGCGGCTCTCTGCCATGAGATTTTCAAACTaGGCAGAGAGTCGCCGGCTTTCCTGGAGAAAGTGC +
Preference number: 6 (lower is better)
Translates to: RSWRLSAMRFSN*AESRRLSWRKC
Trigger: GCACTTTCTCCAGGAAAGCCGGCGACTCTCTGCCCAGTTTGAAAATCTCATGGCAGAGAGCCGCCAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CAA 72 bp ATGGAGCTTGTAGGCAGCCAGGATGTCTTGATGGACTaGCTGTACCTCCTGCAGGGCTGGTTCCCGGAGCAA +
Preference number: 6 (lower is better)
Translates to: MELVGSQDVLMD*LYLLQGWFPEQ
Trigger: TTGCTCCGGGAACCAGCCCTGCAGGAGGTACAGCAAGTCCATCAAGACATCCTGGCTGCCTACAAGCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CAA 72 bp TGCTTGGGCATGGAGCTTGTAGGCAGCCAGGATGTCTaGATGGACTTGCTGTACCTCCTGCAGGGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: CLGMELVGSQDV*MDLLYLLQGWF
Trigger: GAACCAGCCCTGCAGGAGGTACAGCAAGTCCATCAAGACATCCTGGCTGCCTACAAGCTCCATGCCCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS GCA 72 bp GCCTCCTTCATTTCCTGGATCTCAGCCTGGGTTCTCTaGAGAGCTTTGGTCCCAGCTTCTTTCCTCTCTAGG +
Preference number: 6 (lower is better)
Translates to: ASFISWISAWVL*RALVPASFLSR
Trigger: CCTAGAGAGGAAAGAAGCTGGGACCAAAGCTCTGCAGAGAACCCAGGCTGAGATCCAGGAAATGAAGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CCA 72 bp GATGTCTTGATGGACTTGCTGTACCTCCTGCAGGGCTaGTTCCCGGAGCAATACAAGCTCATGGATGAGCTG +
Preference number: 6 (lower is better)
Translates to: DVLMDLLYLLQG*FPEQYKLMDEL
Trigger: CAGCTCATCCATGAGCTTGTATTGCTCCGGGAACCAGCCCTGCAGGAGGTACAGCAAGTCCATCAAGACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CCA 72 bp ACCTCTTCATCTCGTTTTTGCCTCACAAGTGCGATCTaGTCCTCCAGGTTCCTGTTTTGCAGGCGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: TSSSRFCLTSAI*SSRFLFCRRSC
Trigger: GCAGCTCCGCCTGCAAAACAGGAACCTGGAGGACCAGATCGCACTTGTGAGGCAAAAACGAGATGAAGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CAA 72 bp CTGAGCCACGTCCTGCTGGCGGCACTCCAGCTGGTATaGGTAGGCCACACATTCCTTTGTCACTTTGAAAAG +
Preference number: 6 (lower is better)
Translates to: LSHVLLAALQLV*VGHTFLCHFEK
Trigger: CTTTTCAAAGTGACAAAGGAATGTGTGGCCTACCAATACCAGCTGGAGTGCCGCCAGCAGGACGTGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS GCA 72 bp TGTTCCCTGTACTGCTGCACCTCTTCATCTCGTTTTTaGCTCACAAGTGCGATCTGGTCCTCCAGGTTCCTG +
Preference number: 6 (lower is better)
Translates to: CSLYCCTSSSRF*LTSAIWSSRFL
Trigger: CAGGAACCTGGAGGACCAGATCGCACTTGTGAGGCAAAAACGAGATGAAGAGGTGCAGCAGTACAGGGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CCA 72 bp CATTTAGGGATCCAGAGTTCTTTGGAAGAGGAGAATTaGCCTCTACTCTTGTTTTCCTCGCGGCCTGGGCGG +
Preference number: 6 (lower is better)
Translates to: HLGIQSSLEEEN*PLLLFSSRPGR
Trigger: CCGCCCAGGCCGCGAGGAAAACAAGAGTAGAGGCCAATTCTCCTCTTCCAAAGAACTCTGGATCCCTAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CCA 72 bp TGTTGCTGGAGTTGCACCCCATTTCTTAACTGCCTCTaGCGTTCTTCCATTTCCTCCAGCTGTTCCCTGTAC +
Preference number: 6 (lower is better)
Translates to: CCWSCTPFLNCL*RSSISSSCSLY
Trigger: GTACAGGGAACAGCTGGAGGAAATGGAAGAACGCCAGAGGCAGTTAAGAAATGGGGTGCAACTCCAGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CAA 90 bp CTTCTGGGTTCAAGGCTTCTGCCTCATTTAGGGATCCAGAGTTCTTaGGAAGAGGAGAATTGGCCTCTACTCTTGTTTTCCTCGCGGCCT +
Preference number: 6 (lower is better)
Translates to: LLGSRLLPHLGIQSS*EEENWPLLLFSSRP
Trigger: AGGCCGCGAGGAAAACAAGAGTAGAGGCCAATTCTCCTCTTCCAAAGAACTCTGGATCCCTAAATGAGGCAGAAGCCTTGAACCCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS GCA 72 bp TTCTTCTGTTGCTGGAGTTGCACCCCATTTCTTAACTaGCTCTGGCGTTCTTCCATTTCCTCCAGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: FFCCWSCTPFLN*LWRSSISSSCS
Trigger: GGAACAGCTGGAGGAAATGGAAGAACGCCAGAGGCAGTTAAGAAATGGGGTGCAACTCCAGCAACAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8
CDS CAA 72 bp CTCAATATACAGGGCCTCCTCTGCCTTCTCAGTCTCTaGCACATAGAGTGTCTCATCAAGGTCACCTGTGTC +
Preference number: 6 (lower is better)
Translates to: LNIQGLLCLLSL*HIECLIKVTCV
Trigger: GACACAGGTGACCTTGATGAGACACTCTATGTGCAAGAGACTGAGAAGGCAGAGGAGGCCCTGTATATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373484.4
ENST00000409190.8
ENST00000417633.1
ENST00000426909.1
CDS CAA 90 bp CTTCTGGGTTCAAGGCTTCTGCCTCATTTAGGGATCCAGAGTTCTTaGGAAGAGGAGAATTGGCCTCTACTCTTGTTTTCGTCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: LLGSRLLPHLGIQSS*EEENWPLLLFSSFS
Trigger: GGAGAAAGACGAAAACAAGAGTAGAGGCCAATTCTCCTCTTCCAAAGAACTCTGGATCCCTAAATGAGGCAGAAGCCTTGAACCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417633.1
CDS CCA 72 bp CATTTAGGGATCCAGAGTTCTTTGGAAGAGGAGAATTaGCCTCTACTCTTGTTTTCGTCTTTCTCCCCAAGA +
Preference number: 6 (lower is better)
Translates to: HLGIQSSLEEEN*PLLLFSSFSPR
Trigger: TCTTGGGGAGAAAGACGAAAACAAGAGTAGAGGCCAATTCTCCTCTTCCAAAGAACTCTGGATCCCTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417633.1
CDS CAA 90 bp GAGTACATCCAAAGGGTACTTAGTGATCCTTTGCTAAGAAGTTTTTaGCTGTTTCCGGGTTACAGATTTGGCCATATATTTCTAAACAGC +
Preference number: 6 (lower is better)
Translates to: EYIQRVLSDPLLRSF*LFPGYRFGHIFLNS
Trigger: GCTGTTTAGAAATATATGGCCAAATCTGTAACCCGGAAACAGCAAAAAACTTCTTAGCAAAGGATCACTAAGTACCCTTTGGATGTACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373484.4
ENST00000409190.8