RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYMPK (Homo sapiens)

Ensembl gene IDs: ENSG00000125755

Ensembl transcript IDs: ENST00000245934.12, ENST00000593504.5, ENST00000593899.5, ENST00000593959.1, ENST00000594293.5, ENST00000596518.1, ENST00000596824.1, ENST00000598059.5, ENST00000598155.5, ENST00000598329.2, ENST00000598364.1, ENST00000598896.5, ENST00000599460.5, ENST00000599814.5, ENST00000600237.5, ENST00000601582.1, ENST00000601600.1, ENST00000602061.5

Found 1096 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGGCCATCGTGAGGCGGCCAGTTCGTCACCAACCCTGCCGCCCTaGAGGCAAGCTCTCCTGCCTCACCTACCCTGGCCCACAAGTGCC +
Preference number: 1 (lower is better)
Translates to: GGHREAASSSPTLPP*RQALLPHLPWPTSA
Trigger: GGCACTTGTGGGCCAGGGTAGGTGAGGCAGGAGAGCTTGCCTGCAGGGCGGCAGGGTTGGTGACGAACTGGCCGCCTCACGATGGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR TCA 90 bp TCAGGGAGAGCCCAGCGCAGAGTGCTCAGTGAGTGGGGGCCATCGTaGGGCGGCCAGTTCGTCACCAACCCTGCCGCCCTGCAGGCAAGC +
Preference number: 1 (lower is better)
Translates to: SGRAQRRVLSEWGPS*GGQFVTNPAALQAS
Trigger: GCTTGCCTGCAGGGCGGCAGGGTTGGTGACGAACTGGCCGCCTCACGATGGCCCCCACTCACTGAGCACTCTGCGCTGGGCTCTCCCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR TCA 90 bp CAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTaGAGGGTGGGGTGGTGTAGGGTAGGCCCTGCTGACCCCTCTGGG +
Preference number: 1 (lower is better)
Translates to: QLEGCLACSVHAWAC*RVGWCRVGPADPSG
Trigger: CCCAGAGGGGTCAGCAGGGCCTACCCTACACCACCCCACCCTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 90 bp GCCCTGCAGGCAAGCTCTCCTGCCTCACCTACCCTGGCCCACAAGTaGCCTGGAGCCCTGGGTCTGCCCTGCTGCTGCGCCTCTACCACT +
Preference number: 1 (lower is better)
Translates to: ALQASSPASPTLAHK*PGALGLPCCCASTT
Trigger: AGTGGTAGAGGCGCAGCAGCAGGGCAGACCCAGGGCTCCAGGGCACTTGTGGGCCAGGGTAGGTGAGGCAGGAGAGCTTGCCTGCAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 90 bp GGTGTCCAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTaGTCAGGAGGGATGGAGGGGTGGGCGCTCTCAGGGGAGGTGGTC +
Preference number: 1 (lower is better)
Translates to: GVQLRGTGWLLAQKP*SGGMEGWALSGEVV
Trigger: GACCACCTCCCCTGAGAGCGCCCACCCCTCCATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTGGACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 90 bp GGGGAGGAGGCTGAATGGGCAGAGCAGACAGTGGAGGTGAGGACCTaGCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGG +
Preference number: 1 (lower is better)
Translates to: GEEAEWAEQTVEVRT*QKPRKPLLLVRARW
Trigger: CCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGTCCTCACCTCCACTGTCTGCTCTGCCCATTCAGCCTCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 90 bp GGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGGAGGGGTaGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGA +
Preference number: 1 (lower is better)
Translates to: GWLLAQKPCSGGMEG*ALSGEVVLRRGTGR
Trigger: TCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACCCCTCCATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 90 bp GGGCTGGGAGTCTTCATAGCATCTTCTCCAACAGGTGCGAGGGTCTaGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGTC +
Preference number: 1 (lower is better)
Translates to: GLGVFIASSPTGARV*GLRSSFKVSPPAAV
Trigger: GACGGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACCTGTTGGAGAAGATGCTATGAAGACTCCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR GCA 90 bp TCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGCTCCTaGTTGCCGCTGGCCTCCAAGATGGTCATGATGGAGTTAGGGATG +
Preference number: 1 (lower is better)
Translates to: SSSKGPAGASLASGS*LPLASKMVMMELGM
Trigger: CATCCCTAACTCCATCATGACCATCTTGGAGGCCAGCGGCAAGCAGGAGCCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR CCA 90 bp GTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATaGAGGGGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAA +
Preference number: 1 (lower is better)
Translates to: VGQDGSWPRNLAQEG*RGGRSQGRWSLDAE
Trigger: TTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACCCCTCCATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTaGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGCTCCAGAATC +
Preference number: 1 (lower is better)
Translates to: TCQKPRKPLLLVRAR*SLVLPAQPPQGSRI
Trigger: GATTCTGGAGCCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 90 bp ACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGTCTCCTGCTGCTaGCGCCTACTCATCCTTCCTTGGTCTCAGCCTGAGTGTCCCCTT +
Preference number: 1 (lower is better)
Translates to: TSQQAPPSVPAVSCC*RLLILPWSQPECPL
Trigger: AAGGGGACACTCAGGCTGAGACCAAGGAAGGATGAGTAGGCGGCAGCAGCAGGAGACTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 90 bp AGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCGGATCGGCTaGTCAATGACCCTCAGCACCGTCCGCTTGATGTCGGCGATGGCT +
Preference number: 1 (lower is better)
Translates to: SRSSSGEFMPIPRIG*SMTLSTVRLMSAMA
Trigger: AGCCATCGCCGACATCAAGCGGACGGTGCTGAGGGTCATTGAGCAGCCGATCCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR CCA 90 bp AGTATAGAGGGCGACAGTGAGGGTGTCCAGCTCCGTGGGACAGGATaGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGGAGGGGTGG +
Preference number: 1 (lower is better)
Translates to: SIEGDSEGVQLRGTG*LLAQKPCSGGMEGW
Trigger: CCACCCCTCCATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTGGACACCCTCACTGTCGCCCTCTATACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 90 bp GAAGACTGCTGGTGCCTGAGCAGGAGAAAAACTTGGGTTGGGTGCTaGGGACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCC +
Preference number: 1 (lower is better)
Translates to: EDCWCLSRRKTWVGC*GHQLEGCLACSVHA
Trigger: GGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGTCCCCAGCACCCAACCCAAGTTTTTCTCCTGCTCAGGCACCAGCAGTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR TCA 90 bp GGGGCTCTGCTCCATCAGCTGCTGCATCACCACGGCCAGCACCTCTaGCGTGTACACGTTCCGCTCCGCAAAGCACAGGTTGGTGGCTTT +
Preference number: 1 (lower is better)
Translates to: GALLHQLLHHHGQHL*RVHVPLRKAQVGGF
Trigger: AAAGCCACCAACCTGTGCTTTGCGGAGCGGAACGTGTACACGTCAGAGGTGCTGGCCGTGGTGATGCAGCAGCTGATGGAGCAGAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR GCA 90 bp TCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGTCTCCTaGTGCTGCCGCCTACTCATCCTTCCTTGGTCTCAGCCTGAGTGT +
Preference number: 1 (lower is better)
Translates to: SRTSQQAPPSVPAVS*CCRLLILPWSQPEC
Trigger: ACACTCAGGCTGAGACCAAGGAAGGATGAGTAGGCGGCAGCAGCAGGAGACTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTaGGCAGGCCCCAGGGGCACCTTTCCCAATGGCGACAGCCTGACC +
Preference number: 1 (lower is better)
Translates to: KKQGQIPTSACETPV*AGPRGTFPNGDSLT
Trigger: GGTCAGGCTGTCGCCATTGGGAAAGGTGCCCCTGGGGCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 90 bp CTCCCAGAGACCCTCAAGAAACAAGGTCAAATTCCCACCTCGGCCTaGGAGACTCCTGTGTGGGCAGGCCCCAGGGGCACCTTTCCCAAT +
Preference number: 1 (lower is better)
Translates to: LPETLKKQGQIPTSA*ETPVWAGPRGTFPN
Trigger: ATTGGGAAAGGTGCCCCTGGGGCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTTGAGGGTCTCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 90 bp TGGCAGTCGCTTGTGGTAGAGATCCCGGACCCGCTTCACCAGCTCTaGGGAGGGTGGGACTTTGTCTGTGAGGCTGTGCAGACATCTCGT +
Preference number: 1 (lower is better)
Translates to: WQSLVVEIPDPLHQL*GGWDFVCEAVQTSR
Trigger: ACGAGATGTCTGCACAGCCTCACAGACAAAGTCCCACCCTCCCCAGAGCTGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR CCA 90 bp TTTCTTCTCCAGCCCATTGAGCACCGGGATGAGGAAGCGGACGTCTaGCAGTCGCTTGTGGTAGAGATCCCGGACCCGCTTCACCAGCTC +
Preference number: 1 (lower is better)
Translates to: FLLQPIEHRDEEADV*QSLVVEIPDPLHQL
Trigger: GAGCTGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCAGACGTCCGCTTCCTCATCCCGGTGCTCAATGGGCTGGAGAAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR CCA 90 bp CTTGTGGTAGAGATCCCGGACCCGCTTCACCAGCTCTGGGGAGGGTaGGACTTTGTCTGTGAGGCTGTGCAGACATCTCGTGACCAGTGT +
Preference number: 1 (lower is better)
Translates to: LVVEIPDPLHQLWGG*DFVCEAVQTSRDQC
Trigger: ACACTGGTCACGAGATGTCTGCACAGCCTCACAGACAAAGTCCCACCCTCCCCAGAGCTGGTGAAGCGGGTCCGGGATCTCTACCACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR CCA 90 bp CCTCCATTTCCTGTCTACACAATGGAAGTGAACATACCCACCAAGTaGCGGACCAGCAGGCTCAGGCCTGTAGGCGTTCAGGGAGAGCCC +
Preference number: 1 (lower is better)
Translates to: PPFPVYTMEVNIPTK*RTSRLRPVGVQGEP
Trigger: GGGCTCTCCCTGAACGCCTACAGGCCTGAGCCTGCTGGTCCGCCACTTGGTGGGTATGTTCACTTCCATTGTGTAGACAGGAAATGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR TCA 90 bp ACAGCACAGACGGTGGGTTGGGGTGCACCAGGAGCTGCAGGTAGTTaGGGGCAAATTTCTCCACATACTCCCGCAGCTGCTCCTTCTCAT +
Preference number: 1 (lower is better)
Translates to: TAQTVGWGAPGAAGS*GQISPHTPAAAPSH
Trigger: ATGAGAAGGAGCAGCTGCGGGAGTATGTGGAGAAATTTGCCCTCAACTACCTGCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR GCA 90 bp GACTTTGTCTGTGAGGCTGTGCAGACATCTCGTGACCAGTGTCTCTaGTCCCTTGGGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGA +
Preference number: 1 (lower is better)
Translates to: DFVCEAVQTSRDQCL*SLGTIFHQQEQLRG
Trigger: TCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCCCAAGGGAGCAGAGACACTGGTCACGAGATGTCTGCACAGCCTCACAGACAAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR GCA 90 bp CGCTTCACCAGCTCTGGGGAGGGTGGGACTTTGTCTGTGAGGCTGTaGAGACATCTCGTGACCAGTGTCTCTGCTCCCTTGGGACAATTT +
Preference number: 1 (lower is better)
Translates to: RFTSSGEGGTLSVRL*RHLVTSVSAPLGQF
Trigger: AAATTGTCCCAAGGGAGCAGAGACACTGGTCACGAGATGTCTGCACAGCCTCACAGACAAAGTCCCACCCTCCCCAGAGCTGGTGAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR TCA 90 bp AGAGAAATCAAAGGACAGCAGTCTTCTGAGTATAGAGGGCGACAGTaGGGGTGTCCAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAA +
Preference number: 1 (lower is better)
Translates to: REIKGQQSSEYRGRQ*GCPAPWDRMAPGPE
Trigger: TTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTGGACACCCTCACTGTCGCCCTCTATACTCAGAAGACTGCTGTCCTTTGATTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 90 bp GACTTTGTGATCTGGAGCTTAGAGTGCAACCAGGAAGACTGCTGGTaGCTGAGCAGGAGAAAAACTTGGGTTGGGTGCTGGGGACACCAG +
Preference number: 1 (lower is better)
Translates to: DFVIWSLECNQEDCW*LSRRKTWVGCWGHQ
Trigger: CTGGTGTCCCCAGCACCCAACCCAAGTTTTTCTCCTGCTCAGGCACCAGCAGTCTTCCTGGTTGCACTCTAAGCTCCAGATCACAAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 90 bp GGACTCGACTTTGTGATCTGGAGCTTAGAGTGCAACCAGGAAGACTaGTGGTGCCTGAGCAGGAGAAAAACTTGGGTTGGGTGCTGGGGA +
Preference number: 1 (lower is better)
Translates to: GLDFVIWSLECNQED*WCLSRRKTWVGCWG
Trigger: TCCCCAGCACCCAACCCAAGTTTTTCTCCTGCTCAGGCACCAGCAGTCTTCCTGGTTGCACTCTAAGCTCCAGATCACAAAGTCGAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 90 bp CTCGACTTTGTGATCTGGAGCTTAGAGTGCAACCAGGAAGACTGCTaGTGCCTGAGCAGGAGAAAAACTTGGGTTGGGTGCTGGGGACAC +
Preference number: 1 (lower is better)
Translates to: LDFVIWSLECNQEDC*CLSRRKTWVGCWGH
Trigger: GTGTCCCCAGCACCCAACCCAAGTTTTTCTCCTGCTCAGGCACCAGCAGTCTTCCTGGTTGCACTCTAAGCTCCAGATCACAAAGTCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 90 bp CGGGGGAGTGAACAGTGCACAACAAAAGGACTCGACTTTGTGATCTaGAGCTTAGAGTGCAACCAGGAAGACTGCTGGTGCCTGAGCAGG +
Preference number: 1 (lower is better)
Translates to: RGSEQCTTKGLDFVI*SLECNQEDCWCLSR
Trigger: CCTGCTCAGGCACCAGCAGTCTTCCTGGTTGCACTCTAAGCTCCAGATCACAAAGTCGAGTCCTTTTGTTGTGCACTGTTCACTCCCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR TCA 90 bp GGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGGGTaGGCAGAGGTGCTGACTTTTCTTAATGCTGGACTACCAGGAGTG +
Preference number: 1 (lower is better)
Translates to: GCLSCVPSTTQDGYG*AEVLTFLNAGLPGV
Trigger: CACTCCTGGTAGTCCAGCATTAAGAAAAGTCAGCACCTCTGCTCACCCATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 90 bp CCATATAGCAGCCTGAAGGGTGTTTTGGAAAGCTCAGACCTGACTTaGCTCCCAGAGACCCTCAAGAAACAAGGTCAAATTCCCACCTCG +
Preference number: 1 (lower is better)
Translates to: PYSSLKGVLESSDLT*LPETLKKQGQIPTS
Trigger: CGAGGTGGGAATTTGACCTTGTTTCTTGAGGGTCTCTGGGAGGCAAGTCAGGTCTGAGCTTTCCAAAACACCCTTCAGGCTGCTATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 90 bp GTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTaGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGG +
Preference number: 1 (lower is better)
Translates to: VNPLKLYANNMSILS*EWARTFLRSPKGSG
Trigger: CCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp GGGCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCCCAGTCGCAGGCCGATaGGGTCCTGAGGGGGCCGGG +
Preference number: 2 (lower is better)
Translates to: GPGRADGEGEGEEEEGAPPVAGR*GPEGAG
Trigger: CCCGGCCCCCTCAGGACCTCATCGGCCTGCGACTGG...GGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGCCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
3UTR-3UTR GCA 90 bp CGGGCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCCTCTGGCTCCTGCTTaGCGCTGGCCTCCAAGATGG +
Preference number: 2 (lower is better)
Translates to: RAWPGRRRGRGGGRGGGSPLAPA*RWPPRW
Trigger: CCATCTTGGAGGCCAGCGGCAAGCAGGAGCCAGAGG...GGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
3UTR-3UTR GCA 90 bp CGGGCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCTTGGCCTCTGGCTCCTaGTTGCCGCTGGCCTCCAAG +
Preference number: 2 (lower is better)
Translates to: RAWPGRRRGRGGGRGGGSLASGS*LPLASK
Trigger: CTTGGAGGCCAGCGGCAAGCAGGAGCCAGAGGCCAA...GGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
3UTR-3UTR CCA 90 bp GTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGGTGAAGGAGCGGACATaGGCCAGCAGGGGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: VRGSGGSAPPSRSARPLPVKERT*ASRGSR
Trigger: CCGGGAGCCCCTGCTGGCCCATGTCCGCTCCTTCAC...CGGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR TCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGAGAGTGGGGGCCATCGTaGGGCGGCCAGTTCGTCACC +
Preference number: 2 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGEWGPS*GGQFVT
Trigger: GGTGACGAACTGGCCGCCTCACGATGGCCCCCACTC...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp AGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGTCTCCCACGGCCAGCACCTCTaGCGTGTACACGTTCCGCTC +
Preference number: 2 (lower is better)
Translates to: RVWGLRSSFKVSPPAAVSHGQHL*RVHVPL
Trigger: GAGCGGAACGTGTACACGTCAGAGGTGCTGGCCGTG...GGAGACGGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR GCA 90 bp GGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCATGGGCAGGGGGCTCTaGTCCATCAGCTGCTGCATC +
Preference number: 2 (lower is better)
Translates to: GARVWGLRSSFKVSPPAAMGRGL*SISCCI
Trigger: GATGCAGCAGCTGATGGAGCAGAGCCCCCTGCCCAT...GGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR CCA 90 bp GGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCTGCAGGTACTGGAACTaGCGGGACGGGCGCTTGAAG +
Preference number: 2 (lower is better)
Translates to: GARVWGLRSSFKVSPPAACRYWN*RDGRLK
Trigger: CTTCAAGCGCCCGTCCCGCCAGTTCCAGTACCTGCA...GGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR TCA 90 bp AGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCAGTCGCAGGCCGATaGGGTCCTGAGGGGGCCGGG +
Preference number: 2 (lower is better)
Translates to: SPESSSMLMKMPGVSHSGPVAGR*GPEGAG
Trigger: CCCGGCCCCCTCAGGACCTCATCGGCCTGCGACTGG...GCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
3UTR-3UTR GCA 90 bp CAACAGGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGTTGGCCTCTGGCTCCTaGTTGCCGCTGGCCTCCAAG +
Preference number: 2 (lower is better)
Translates to: QQVRGSGGSAPPSRSARPLASGS*LPLASK
Trigger: CTTGGAGGCCAGCGGCAAGCAGGAGCCAGAGGCCAA...CGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACCTGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR CCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCGGCCCACAAGTGCCCTaGAGCCCTGGGTCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPGPQVP*SPGSAL
Trigger: CAGGGCAGACCCAGGGCTCCAGGGCACTTGTGGGCC...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp GGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCAAACAGCACAGACGGTaGGTTGGGGTGCACCAGGAG +
Preference number: 2 (lower is better)
Translates to: GARVWGLRSSFKVSPPAAKQHRR*VGVHQE
Trigger: CTCCTGGTGCACCCCAACCCACCGTCTGTGCTGTTT...GGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR GCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGGCAGGCAAGCTCTCCTaGCTCACCTACCCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: APRQGQVVTGPACSATPRAGKLS*LTYPGP
Trigger: TGGGCCAGGGTAGGTGAGGCAGGAGAGCTTGCCTGC...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGAGTTCGTCACCAACCCTaGCGCCCTGCAGGCAAGCTC +
Preference number: 2 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGVRHQP*RPAGKL
Trigger: GAGCTTGCCTGCAGGGCGGCAGGGTTGGTGACGAAC...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp GTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGAGCTGCAGGATGACCTaGAAGCTCTGGGGCTTTGTG +
Preference number: 2 (lower is better)
Translates to: VRGSGGSAPPSRSARPLPSCRMT*KLWGFV
Trigger: CACAAAGCCCCAGAGCTTCCAGGTCATCCTGCAGCT...CGGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR TCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAGCGCAGAGTGCTCAGTaGGTGGGGGCCATCGTGAGG +
Preference number: 2 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPAQSAQ*VGAIVR
Trigger: CCTCACGATGGCCCCCACTCACTGAGCACTCTGCGC...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGTCGGGAAGTCTTCCCTaGTGTCCCACACCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: APRQGQVVTGPACSATPRSGSLP*CPTPRL
Trigger: CAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGA...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCGGTCTGCCCTGCTGCTaGGCCTCTACCACTCACGGT +
Preference number: 2 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPGLPCC*ASTTHG
Trigger: ACCGTGAGTGGTAGAGGCGCAGCAGCAGGGCAGACC...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACTGGAGCCCTGGGTCTaGCCTGCTGCTGCGCCTCTA +
Preference number: 2 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPLEPWV*PAAAPL
Trigger: TAGAGGCGCAGCAGCAGGGCAGACCCAGGGCTCCAG...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGCCAACCCTGCCGCCCTaGAGGCAAGCTCTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQPTLPP*RQALLP
Trigger: AGGCAGGAGAGCTTGCCTGCAGGGCGGCAGGGTTGG...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp GAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCCTCCTCCGTCCAGGGTaGTGCCACCTCTGTGTCCTT +
Preference number: 2 (lower is better)
Translates to: EGEGEEEEGAPTPPGFSFLLRPG*CHLCVL
Trigger: AAGGACACAGAGGTGGCAGCACCCTGGACGGAGGAG...GAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR CCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTAGTGCCCTGGAGCCCTaGGTCTGCCCTGCTGCTGCG +
Preference number: 2 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVSALEP*VCPAAA
Trigger: CGCAGCAGCAGGGCAGACCCAGGGCTCCAGGGCACT...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGAGTGCCCTGGAGCCCTaGGTCTGCCCTGCTGCTGCG +
Preference number: 2 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMSALEP*VCPAAA
Trigger: CGCAGCAGCAGGGCAGACCCAGGGCTCCAGGGCACT...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp TCCTTGGGTAGGGGGCCCTCGAGACTAGAGTCCAACAGCGCGGCCTCGGTCAGCGCACAGACGGTGGGTTaGGGTGCACCAGGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: SLGRGPSRLESNSAASVSAQTVG*GAPGAA
Trigger: TGCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGC...GCTGACCGAGGCCGCGCTGTTGGACTCTAGTCTCGAGGGCCCCCTACCCAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR CCA 90 bp CAACAGGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGATGACCTGGAAGCTCTaGGGCTTTGTGCGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: QQVRGSGGSAPPSRSARPMTWKL*GFVRWQ
Trigger: CTGCCAGCGCACAAAGCCCCAGAGCTTCCAGGTCAT...CGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACCTGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR TCA 90 bp TCCTTGGGTAGGGGGCCCTCGAGACTAGAGTCCAACAGCGCGGCCTCGGTCAGCTCAGCACCGTCCGCTTaGTGTCGGCGATGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: SLGRGPSRLESNSAASVSSAPSA*CRRWLQ
Trigger: CTGAAGCCATCGCCGACATCAAGCGGACGGTGCTGA...GCTGACCGAGGCCGCGCTGTTGGACTCTAGTCTCGAGGGCCCCCTACCCAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR GCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTGCCCTGGGTCTGCCCTaGTGCTGCGCCTCTACCACT +
Preference number: 2 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVALGLP*CCASTT
Trigger: AGTGGTAGAGGCGCAGCAGCAGGGCAGACCCAGGGC...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGGGACAGGATGGCTCCTaGCCCAGAAACCTTGCTCAG +
Preference number: 2 (lower is better)
Translates to: APRQGQVVTGPACSATPRGQDGS*PRNLAQ
Trigger: CTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCC...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGAGCTGGAGGGTTGTCTaGCCTGCAGCGTGCACGCCT +
Preference number: 2 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQSWRVV*PAACTP
Trigger: AGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCT...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGGCTGGGGACACCAGCTaGAGGGTTGTCTGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLAGDTS*RVVWPA
Trigger: TGCAGGCCAGACAACCCTCCAGCTGGTGTCCCCAGC...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp GGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCAGTTTAGGCAGGGCCTaGATCACCTCTTTCTTCTCC +
Preference number: 2 (lower is better)
Translates to: GARVWGLRSSFKVSPPAASLGRA*ITSFFS
Trigger: GGAGAAGAAAGAGGTGATCCAGGCCCTGCCTAAACT...GGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR GCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGCTGGCCCAGAAACCTTaGTCAGGAGGGATGGAGGGG +
Preference number: 2 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQLAQKP*SGGMEG
Trigger: CCCCTCCATCCCTCCTGAGCAAGGTTTCTGGGCCAG...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCGTCTGGCCTGCAGCGTaGACGCCTGGGCGTGTTGAA +
Preference number: 2 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVVWPAA*TPGRVE
Trigger: TTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGAC...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGTGCAACCAGGAAGACTaGTGGTGCCTGAGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: APRQGQVVTGPACSATPRCNQED*WCLSRR
Trigger: TCTCCTGCTCAGGCACCAGCAGTCTTCCTGGTTGCA...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp GAGACTAGAGTCCAACAGCGCGGCCTCGGTCAGCCCCGAGTCGTCATCCATGCTCCTCTGGCTCCTGCTTaGCGCTGGCCTCCAAGATGG +
Preference number: 2 (lower is better)
Translates to: ETRVQQRGLGQPRVVIHAPLAPA*RWPPRW
Trigger: CCATCTTGGAGGCCAGCGGCAAGCAGGAGCCAGAGG...AGCATGGATGACGACTCGGGGCTGACCGAGGCCGCGCTGTTGGACTCTAGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR GCA 90 bp GAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCTGTTCCTCCTCCAGCTaGCGCTTTAAGGCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: EGEGEEEEGAPTPPGFSFCSSSS*RFKAFS
Trigger: GGAGAAGGCCTTAAAGCGGCAGCTGGAGGAGGAACA...GAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
3UTR-3UTR CCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGGCCCACAAGTGCCCTaGAGCCCTGGGTCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLGPQVP*SPGSAL
Trigger: CAGGGCAGACCCAGGGCTCCAGGGCACTTGTGGGCC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp CAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCTCCCGGAAATCCATaGCTTCCTCAGACGGGGGCG +
Preference number: 2 (lower is better)
Translates to: QPRVVIHADEDARGLALRPPGNP*LPQTGA
Trigger: CGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGG...CCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
3UTR CAA 90 bp CCCATTCCTCGGATCGGCTGCTCAATGACCCTCAGCACCGTCCGCTaGATGTCGGCGATGGCTTCAGTGTACACGGCCGCCAGTTCGTGG +
Preference number: 2 (lower is better)
Translates to: PIPRIGCSMTLSTVR*MSAMASVYTAASSW
Trigger: CCACGAACTGGCGGCCGTGTACACTGAAGCCATCGCCGACATCAAGCGGACGGTGCTGAGGGTCATTGAGCAGCCGATCCGAGGAATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR TCA 90 bp GTCCAACAGCGCGGCCTCGGTCAGCCCCGAGTCGTCATCCATGCTGATGAAGATGGATCGGCTGCTCAATaGCCCTCAGCACCGTCCGCT +
Preference number: 2 (lower is better)
Translates to: VQQRGLGQPRVVIHADEDGSAAQ*PSAPSA
Trigger: AGCGGACGGTGCTGAGGGTCATTGAGCAGCCGATCC...ATCTTCATCAGCATGGATGACGACTCGGGGCTGACCGAGGCCGCGCTGTTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR GCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGACTCACGGTGTGCCCTaGTTCCTTCTGTTCCTCGGG +
Preference number: 2 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQTHGVP*FLLFLG
Trigger: CCCGAGGAACAGAAGGAAGCAGGGCACACCGTGAGT...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGACTCACGGTGTGCCCTaGTTCCTTCTGTTCCTCGGG +
Preference number: 2 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKTHGVP*FLLFLG
Trigger: CCCGAGGAACAGAAGGAAGCAGGGCACACCGTGAGT...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp GTCCAACAGCGCGGCCTCGGTCAGCCCCGAGTCGTCATCCATGCTGATGAAGATGAGTTTCCCTCACCATaGTGGGTGCCCAGCAGGCGG +
Preference number: 2 (lower is better)
Translates to: VQQRGLGQPRVVIHADEDEFPSP*WVPSRR
Trigger: CCGCCTGCTGGGCACCCAGCATGGTGAGGGAAACTC...ATCTTCATCAGCATGGATGACGACTCGGGGCTGACCGAGGCCGCGCTGTTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR CCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGCTGGACTGTAAGCCCTaGAAGGACAGGGCTAGGGCT +
Preference number: 2 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLLDCKP*KDRARA
Trigger: AGCCCTAGCCCTGTCCTTCCAGGGCTTACAGTCCAG...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCGCGCAGAGTGCTCAGTaGGTGGGGGCCATCGTGAGG +
Preference number: 2 (lower is better)
Translates to: KKQGQIPTSACETPVWAGAQSAQ*VGAIVR
Trigger: CCTCACGATGGCCCCCACTCACTGAGCACTCTGCGC...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGGCCCTGGGTCTGCCCTaGTGCTGCGCCTCTACCACT +
Preference number: 2 (lower is better)
Translates to: DRARAVFPVSPALPRMDMALGLP*CCASTT
Trigger: AGTGGTAGAGGCGCAGCAGCAGGGCAGACCCAGGGC...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCGAGGGTTGTCTGGCCTaGAGCGTGCACGCCTGGGCG +
Preference number: 2 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLEGCLA*SVHAWA
Trigger: CGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTC...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp GGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCGGAGGACATGCAGGTACTaGAACTGGCGGGACGGGCGC +
Preference number: 2 (lower is better)
Translates to: GQFSTSRSSSGEFMPIPRRTCRY*NWRDGR
Trigger: GCGCCCGTCCCGCCAGTTCCAGTACCTGCATGTCCT...CCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR TCA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATGAGTGGGGGCCATCGTaGGGCGGCCAGTTCGTCACC +
Preference number: 2 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNEWGPS*GGQFVT
Trigger: GGTGACGAACTGGCCGCCTCACGATGGCCCCCACTC...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp CCCATTCCTCGGATCGGCTGCTCAATGACCCTCAGCACCGTCCGCTTGATGTCGCCTTCTCATGGGAGCTaGGGTCGAGGAGGACATGCA +
Preference number: 2 (lower is better)
Translates to: PIPRIGCSMTLSTVRLMSPSHGS*GRGGHA
Trigger: TGCATGTCCTCCTCGACCTCAGCTCCCATGAGAAGG...CGACATCAAGCGGACGGTGCTGAGGGTCATTGAGCAGCCGATCCGAGGAATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR GCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCGTCTGGCCTGCAGCGTaGACGCCTGGGCGTGTTGAA +
Preference number: 2 (lower is better)
Translates to: KKQGQIPTSACETPVWAGVWPAA*TPGRVE
Trigger: TTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGAC...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGCGGGGGAGTGAACAGTaGACAACAAAAGGACTCGAC +
Preference number: 2 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLRGSEQ*TTKGLD
Trigger: GTCGAGTCCTTTTGTTGTGCACTGTTCACTCCCCCG...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGCTGCCTCACCTACCCTaGCCCACAAGTGCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: DRARAVFPVSPALPRMDMLPHLP*PTSALE
Trigger: CTCCAGGGCACTTGTGGGCCAGGGTAGGTGAGGCAG...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGTCCCACGAGAGGCCTTaGTGCCTCCTGGGTTTTATA +
Preference number: 2 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQSHERP*CLLGFI
Trigger: TATAAAACCCAGGAGGCACCAAGGCCTCTCGTGGGA...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGCTTCTTGTCTCTCCCTaGACTGTAAGCCCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLLLVSP*TVSPGR
Trigger: CCTTCCAGGGCTTACAGTCCAGGGAGAGACAAGAAG...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp ATCAGCTGCTGCATCACCACGGCCAGCACCTCTGACGTGTACACGTTCCGCTCCATGAACAGCAGGGCCTaGGAGCGCACCTTGTCCTTC +
Preference number: 2 (lower is better)
Translates to: ISCCITTASTSDVYTFRSMNSRA*ERTLSF
Trigger: GAAGGACAAGGTGCGCTCCCAGGCCCTGCTGTTCAT...GGAGCGGAACGTGTACACGTCAGAGGTGCTGGCCGTGGTGATGCAGCAGCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR CAA 90 bp TGCAGGATGACCTGGAAGCTCTGGGGCTTTGTGCGCTGGCAGCACTaGATGAAGCCCTCCCACACCTTGGGGTACTTCCACACCTGCTTC +
Preference number: 2 (lower is better)
Translates to: CRMTWKLWGFVRWQH*MKPSHTLGYFHTCF
Trigger: GAAGCAGGTGTGGAAGTACCCCAAGGTGTGGGAGGGCTTCATCAAGTGCTGCCAGCGCACAAAGCCCCAGAGCTTCCAGGTCATCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR TCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGGGTGAGCAGAGGTGCTaGCTTTTCTTAATGCTGGAC +
Preference number: 2 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLGEQRC*LFLMLD
Trigger: GTCCAGCATTAAGAAAAGTCAGCACCTCTGCTCACC...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp GACCTGGAAGCTCTGGGGCTTTGTGCGCTGGCAGCACTTGATGAAGCCCTCCCAGTGGGACTTTGTCTGTaGGGCTGTGCAGACATCTCG +
Preference number: 2 (lower is better)
Translates to: DLEALGLCALAALDEALPVGLCL*GCADIS
Trigger: CGAGATGTCTGCACAGCCTCACAGACAAAGTCCCAC...TGGGAGGGCTTCATCAAGTGCTGCCAGCGCACAAAGCCCCAGAGCTTCCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR GCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATCTGGGTCTGCCCTGCTaGTGCGCCTCTACCACTCAC +
Preference number: 2 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYLGLPC*CASTTH
Trigger: GTGAGTGGTAGAGGCGCAGCAGCAGGGCAGACCCAG...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCGCAGGCAAGCTCTCCTaGCTCACCTACCCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLAGKLS*LTYPGP
Trigger: TGGGCCAGGGTAGGTGAGGCAGGAGAGCTTGCCTGC...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATGAGCCCAGCGCAGAGTaGTCAGTGAGTGGGGGCCAT +
Preference number: 2 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYEPSAE*SVSGGH
Trigger: ATGGCCCCCACTCACTGAGCACTCTGCGCTGGGCTC...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGATCTGGAGCTTAGAGTaGAACCAGGAAGACTGCTGG +
Preference number: 2 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQIWSLE*NQEDCW
Trigger: CCAGCAGTCTTCCTGGTTGCACTCTAAGCTCCAGAT...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp GGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCGGAGGTCGAGGAGGACATaGAGGTACTGGAACTGGCGG +
Preference number: 2 (lower is better)
Translates to: GQFSTSRSSSGEFMPIPRRSRRT*RYWNWR
Trigger: CCGCCAGTTCCAGTACCTGCATGTCCTCCTCGACCT...CCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR CCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATCGCTCTCAGGGGAGGTaGTCCTTAGACGCGGAACCG +
Preference number: 2 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYRSQGR*SLDAEP
Trigger: CGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGATACTGTCCTGGGAATaGGCTAGAACTTTCCTCAGA +
Preference number: 2 (lower is better)
Translates to: APRQGQVVTGPACSATPRILSWE*ARTFLR
Trigger: TCTGAGGAAAGTTCTAGCCCATTCCCAGGACAGTAT...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCTATAGAGGGCGACAGTaGGGGTGTCCAGCTCCGTGG +
Preference number: 2 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLYRGRQ*GCPAPW
Trigger: CCACGGAGCTGGACACCCTCACTGTCGCCCTCTATA...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAACACAGCCCTGGCCTATaGGCCTGGAGATCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQHSPGL*AWRSFL
Trigger: GAGGAAAGATCTCCAGGCTCATAGGCCAGGGCTGTG...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp GGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCGGACCTTGTCCTTCTCATaGGAGCTGAGGTCGAGGAGG +
Preference number: 2 (lower is better)
Translates to: GQFSTSRSSSGEFMPIPRTLSFS*ELRSRR
Trigger: CCTCCTCGACCTCAGCTCCCATGAGAAGGACAAGGT...CCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR CCA 90 bp GGAAGCGGACGTCTGGCAGTCGCTTGTGGTAGAGATCCCGGACCCGCTTCACCAGTGTCTCTGCTCCCTTaGGACAATTTTCCACCAGCA +
Preference number: 2 (lower is better)
Translates to: GSGRLAVACGRDPGPASPVSLLP*DNFPPA
Trigger: TGCTGGTGGAAAATTGTCCCAAGGGAGCAGAGACAC...TGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCAGACGTCCGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR CAA 90 bp TCTGTGAGGCTGTGCAGACATCTCGTGACCAGTGTCTCTGCTCCCTaGGGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATG +
Preference number: 2 (lower is better)
Translates to: SVRLCRHLVTSVSAP*GQFSTSRSSSGEFM
Trigger: CATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCCCAAGGGAGCAGAGACACTGGTCACGAGATGTCTGCACAGCCTCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR GCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGCTACCACTCACGGTGTaGCCTGCTTCCTTCTGTTCC +
Preference number: 2 (lower is better)
Translates to: DRARAVFPVSPALPRMDMLPLTV*PASFCS
Trigger: GGAACAGAAGGAAGCAGGGCACACCGTGAGTGGTAG...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCACACCACTTAGCTTCTaGTTGGCCCTGAGTAAGTCA +
Preference number: 2 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVTPLSF*LALSKS
Trigger: TGACTTACTCAGGGCCAAGCAGAAGCTAAGTGGTGT...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCCGGGGGAGTGAACAGTaGACAACAAAAGGACTCGAC +
Preference number: 2 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLRGSEQ*TTKGLD
Trigger: GTCGAGTCCTTTTGTTGTGCACTGTTCACTCCCCCG...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp GTGTCCTTGTCAGCTCCAAACAGCACAGACGGTGGGTTGGGGTGCACCAGGAGCACATACTCCCGCAGCTaGTCCTTCTCATACATGCGT +
Preference number: 2 (lower is better)
Translates to: VSLSAPNSTDGGLGCTRSTYSRS*SFSYMR
Trigger: ACGCATGTATGAGAAGGAGCAGCTGCGGGAGTATGT...GCTCCTGGTGCACCCCAACCCACCGTCTGTGCTGTTTGGAGCTGACAAGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR CCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGATACTGTCCTGGGAATaGGCTAGAACTTTCCTCAGA +
Preference number: 2 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKILSWE*ARTFLR
Trigger: TCTGAGGAAAGTTCTAGCCCATTCCCAGGACAGTAT...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGTGTATGCAAATAATATaGGCATACTGTCCTGGGAAT +
Preference number: 2 (lower is better)
Translates to: APRQGQVVTGPACSATPRCMQII*AYCPGN
Trigger: ATTCCCAGGACAGTATGCTCATATTATTTGCATACA...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGACTGCTGGTGCCTaGGCAGGAGAAAAACTTGGG +
Preference number: 2 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQKTAGA*AGEKLG
Trigger: CCCAAGTTTTTCTCCTGCTCAGGCACCAGCAGTCTT...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCCAGGATGGATATGGGTaGGCAGAGGTGCTGACTTTT +
Preference number: 2 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLQDGYG*AEVLTF
Trigger: AAAAGTCAGCACCTCTGCTCACCCATATCCATCCTG...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp GGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCGGGGAGCTGCAGGTAGTTaGGGGCAAATTTCTCCACAT +
Preference number: 2 (lower is better)
Translates to: GQFSTSRSSSGEFMPIPRGAAGS*GQISPH
Trigger: ATGTGGAGAAATTTGCCCTCAACTACCTGCAGCTCC...CCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR GCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATCTACCACTCACGGTGTaGCCTGCTTCCTTCTGTTCC +
Preference number: 2 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYLPLTV*PASFCS
Trigger: GGAACAGAAGGAAGCAGGGCACACCGTGAGTGGTAG...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCTCCCACGAGAGGCCTTaGTGCCTCCTGGGTTTTATA +
Preference number: 2 (lower is better)
Translates to: KKQGQIPTSACETPVWAGSHERP*CLLGFI
Trigger: TATAAAACCCAGGAGGCACCAAGGCCTCTCGTGGGA...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CAA 90 bp CCCAGCAGGCGGTTGAAGACTTCCTTCACCACGATGGGGTTGAGTTaGATGAGTTTAGGCAGGGCCTGGATCACCTCTTTCTTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: PSRRLKTSFTTMGLS*MSLGRAWITSFFSS
Trigger: GCTGGAGAAGAAAGAGGTGATCCAGGCCCTGCCTAAACTCATCAAACTCAACCCCATCGTGGTGAAGGAAGTCTTCAACCGCCTGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR CAA 90 bp TGGGTGCCCAGCAGGCGGTTGAAGACTTCCTTCACCACGATGGGGTaGAGTTTGATGAGTTTAGGCAGGGCCTGGATCACCTCTTTCTTC +
Preference number: 2 (lower is better)
Translates to: WVPSRRLKTSFTTMG*SLMSLGRAWITSFF
Trigger: GAAGAAAGAGGTGATCCAGGCCCTGCCTAAACTCATCAAACTCAACCCCATCGTGGTGAAGGAAGTCTTCAACCGCCTGCTGGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR TCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCAAGACTGCTGGTGCCTaGGCAGGAGAAAAACTTGGG +
Preference number: 2 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLKTAGA*AGEKLG
Trigger: CCCAAGTTTTTCTCCTGCTCAGGCACCAGCAGTCTT...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATCTGGAGCCCTGGGTCTaGCCTGCTGCTGCGCCTCTA +
Preference number: 2 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNLEPWV*PAAAPL
Trigger: TAGAGGCGCAGCAGCAGGGCAGACCCAGGGCTCCAG...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCACACCACTTAGCTTCTaGTTGGCCCTGAGTAAGTCA +
Preference number: 2 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLTPLSF*LALSKS
Trigger: TGACTTACTCAGGGCCAAGCAGAAGCTAAGTGGTGT...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCCACGAGAGGCCTTGGTaGCTCCTGGGTTTTATAATG +
Preference number: 2 (lower is better)
Translates to: KKQGQIPTSACETPVWAGHERPW*LLGFIM
Trigger: CATTATAAAACCCAGGAGGCACCAAGGCCTCTCGTG...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCTCAGGGCTTCTAATCTaGGTCCACAAATGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: KKQGQIPTSACETPVWAGSGLLI*VHKWPW
Trigger: CCAAGGCCATTTGTGGACCCAGATTAGAAGCCCTGA...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CAA 90 bp AATTTCTCCACATACTCCCGCAGCTGCTCCTTCTCATACATGCGTTaGATGAACAGCAGGGCCTGGGAGCGCACCTTGTCCTTCTCATGG +
Preference number: 2 (lower is better)
Translates to: NFSTYSRSCSFSYMR*MNSRAWERTLSFSW
Trigger: CCATGAGAAGGACAAGGTGCGCTCCCAGGCCCTGCTGTTCATCAAACGCATGTATGAGAAGGAGCAGCTGCGGGAGTATGTGGAGAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR GCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATCTGGGTCTGCCCTGCTaGTGCGCCTCTACCACTCAC +
Preference number: 2 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNLGLPC*CASTTH
Trigger: GTGAGTGGTAGAGGCGCAGCAGCAGGGCAGACCCAG...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGCTTGCTCAGGAGGGATaGAGGGGTGGGCGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKLAQEG*RGGRSQ
Trigger: CTGAGAGCGCCCACCCCTCCATCCCTCCTGAGCAAG...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CAA 90 bp GTGGCTTTGATGATGGATTTCATGTCGCACTTCACGGAGTCAATGTaGTGTAATGCGATCAGGAGCTCTCCAGGGTTCAGCGGGGACAAG +
Preference number: 2 (lower is better)
Translates to: VALMMDFMSHFTESM*CNAIRSSPGFSGDK
Trigger: CTTGTCCCCGCTGAACCCTGGAGAGCTCCTGATCGCATTACACAACATTGACTCCGTGAAGTGCGACATGAAATCCATCATCAAAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR GCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGGTTCGTCACCAACCCTaGCGCCCTGCAGGCAAGCTC +
Preference number: 2 (lower is better)
Translates to: VCVNPLKLYANNMSILSWVRHQP*RPAGKL
Trigger: GAGCTTGCCTGCAGGGCGGCAGGGTTGGTGACGAAC...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGGGAGGGATGGAGGGGTaGGCGCTCTCAGGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQGGMEG*ALSGEV
Trigger: CACCTCCCCTGAGAGCGCCCACCCCTCCATCCCTCC...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCGGGTGTCCAGCTCCGTaGGACAGGATGGCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: CVCVNPLKLYANNMSILSGCPAP*DRMAPG
Trigger: GCCAGGAGCCATCCTGTCCCACGGAGCTGGACACCC...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCATGAGCATACTGTCCTaGGAATGGGCTAGAACTTTC +
Preference number: 2 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLMSILS*EWARTF
Trigger: GAAAGTTCTAGCCCATTCCCAGGACAGTATGCTCAT...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCAGGGGTCGGGGAATGTaGAGACCACAGCCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: CVCVNPLKLYANNMSILSRGRGM*RPQPWP
Trigger: AGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCT...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGCCAACCCTGCCGCCCTaGAGGCAAGCTCTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQPTLPP*RQALLP
Trigger: AGGCAGGAGAGCTTGCCTGCAGGGCGGCAGGGTTGG...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCGAGCCCAGCGCAGAGTaGTCAGTGAGTGGGGGCCAT +
Preference number: 2 (lower is better)
Translates to: CVCVNPLKLYANNMSILSEPSAE*SVSGGH
Trigger: ATGGCCCCCACTCACTGAGCACTCTGCGCTGGGCTC...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCGACATTTCCATAAGCTaGTCTCTTGACCTTAAACGT +
Preference number: 2 (lower is better)
Translates to: KKQGQIPTSACETPVWAGDISIS*SLDLKR
Trigger: ACGTTTAAGGTCAAGAGAGCAGCTTATGGAAATGTC...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGGGACAGGATGGCTCCTaGCCCAGAAACCTTGCTCAG +
Preference number: 2 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKGQDGS*PRNLAQ
Trigger: CTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCC...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGCACAGCCCTGGCCTATaGGCCTGGAGATCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: VCVNPLKLYANNMSILSWHSPGL*AWRSFL
Trigger: GAGGAAAGATCTCCAGGCTCATAGGCCAGGGCTGTG...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCCTGGCCCAGAAACCTTaGTCAGGAGGGATGGAGGGG +
Preference number: 2 (lower is better)
Translates to: CVCVNPLKLYANNMSILSLAQKP*SGGMEG
Trigger: CCCCTCCATCCCTCCTGAGCAAGGTTTCTGGGCCAG...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CAA 90 bp TTCACTTCAGATTCTGTTTCTTCTACCACACCACTTAGCTTCTGCTaGGCCCTGAGTAAGTCACCTAACCTCTCTGGAGCCTCCATTTCC +
Preference number: 2 (lower is better)
Translates to: FTSDSVSSTTPLSFC*ALSKSPNLSGASIS
Trigger: GGAAATGGAGGCTCCAGAGAGGTTAGGTGACTTACTCAGGGCCAAGCAGAAGCTAAGTGGTGTGGTAGAAGAAACAGAATCTGAAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR GCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATGACATTTCCATAAGCTaGTCTCTTGACCTTAAACGT +
Preference number: 2 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNDISIS*SLDLKR
Trigger: ACGTTTAAGGTCAAGAGAGCAGCTTATGGAAATGTC...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR TCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATTTTATAATGTGGGTTTaGCATTTCCATAAGCTGCTC +
Preference number: 2 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNFIMWV*HFHKLL
Trigger: GAGCAGCTTATGGAAATGTCAAACCCACATTATAAA...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 72 bp GGGTCTCGCACTCAGGCCCCTCCTCCCGGAAATCCATaGCTTCCTCAGACGGGGGCGGGCCTGGCCGGGCCG +
Preference number: 3 (lower is better)
Translates to: GSRTQAPPPGNP*LPQTGAGLAGP
Trigger: CGGCCCGGCCAGGCCCGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGGAGGGGCCTGAGTGCGAGACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
3UTR TCA 72 bp GCCCAGCGCAGAGTGCTCAGTGAGTGGGGGCCATCGTaGGGCGGCCAGTTCGTCACCAACCCTGCCGCCCTG +
Preference number: 3 (lower is better)
Translates to: AQRRVLSEWGPS*GGQFVTNPAAL
Trigger: CAGGGCGGCAGGGTTGGTGACGAACTGGCCGCCTCACGATGGCCCCCACTCACTGAGCACTCTGCGCTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CAA 90 bp TCCTTGGGTAGGGGGCCCTCGAGACTAGAGTCCAACAGCGCGGCCTCGGTCAGCAGCACAGACGGTGGGTaGGGGTGCACCAGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: SLGRGPSRLESNSAASVSSTDGG*GCTRSC
Trigger: GCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGCT...GCTGACCGAGGCCGCGCTGTTGGACTCTAGTCTCGAGGGCCCCCTACCCAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR GCA 72 bp CTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTaGTCAGGAGGGATGGAGGGGTGGGCGCTCTCAGGG +
Preference number: 3 (lower is better)
Translates to: LRGTGWLLAQKP*SGGMEGWALSG
Trigger: CCCTGAGAGCGCCCACCCCTCCATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 72 bp GGGGACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTaGACGCCTGGGCGTGTTGAAGGGTGGGGTGGTGTA +
Preference number: 3 (lower is better)
Translates to: GDTSWRVVWPAA*TPGRVEGWGGV
Trigger: TACACCACCCCACCCTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 72 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTaGTCAGCCACCCCAAGGCTCCAGAATCACCCCTCC +
Preference number: 3 (lower is better)
Translates to: APRQGQVVTGPA*SATPRLQNHPS
Trigger: GGAGGGGTGATTCTGGAGCCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 72 bp CCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTaGCTGCTCAGCCACCCCAAGGCTCCAGAATCACCC +
Preference number: 3 (lower is better)
Translates to: PCSSSGPGGHWS*LLSHPKAPESP
Trigger: GGGTGATTCTGGAGCCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 72 bp AAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGCTCCTaGTTGCCGCTGGCCTCCAAGATGGTCATGATGGAG +
Preference number: 3 (lower is better)
Translates to: KGPAGASLASGS*LPLASKMVMME
Trigger: CTCCATCATGACCATCTTGGAGGCCAGCGGCAAGCAGGAGCCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
3UTR CCA 72 bp CAGGAGGGATGGAGGGGTGGGCGCTCTCAGGGGAGGTaGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTC +
Preference number: 3 (lower is better)
Translates to: QEGWRGGRSQGR*SLDAEPAELGF
Trigger: GAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACCCCTCCATCCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 72 bp AAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTaGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGC +
Preference number: 3 (lower is better)
Translates to: KPRKPLLLVRAR*SLVLPAQPPQG
Trigger: GCCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CAA 90 bp TCCTCCCGGAAATCCATGGCTTCCTCAGACGGGGGCGGGCCTGGCCGGGCCGACGCCACCTCTGTGTCCTaGTCAGCTCCAAACAGCACA +
Preference number: 3 (lower is better)
Translates to: SSRKSMASSDGGGPGRADATSVS*SAPNST
Trigger: TGTGCTGTTTGGAGCTGACAAGGACACAGAGGTGGC...GTCGGCCCGGCCAGGCCCGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR CAA 90 bp GAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCGTGCCCAGCAGGCGGTaGAAGACTTCCTTCACCACG +
Preference number: 3 (lower is better)
Translates to: EGEGEEEEGAPTPPGFSFVPSRR*KTSFTT
Trigger: CGTGGTGAAGGAAGTCTTCAACCGCCTGCTGGGCAC...GAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR CCA 72 bp CTGGCCCAGAAACCTTGCTCAGGAGGGATGGAGGGGTaGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGA +
Preference number: 3 (lower is better)
Translates to: LAQKPCSGGMEG*ALSGEVVLRRG
Trigger: TCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACCCCTCCATCCCTCCTGAGCAAGGTTTCTGGGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 72 bp GATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCTaGGCTGCCCAGTCCCAGGCCACCCCTCTCAGTTGT +
Preference number: 3 (lower is better)
Translates to: DVPHPGWVTWPL*AAQSQATPLSC
Trigger: ACAACTGAGAGGGGTGGCCTGGGACTGGGCAGCCCAGAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 72 bp GGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTaGGCAGGCCCCAGGGGCACCTTTCCCAATGGCGAC +
Preference number: 3 (lower is better)
Translates to: GQIPTSACETPV*AGPRGTFPNGD
Trigger: GTCGCCATTGGGAAAGGTGCCCCTGGGGCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CAA 90 bp GGTCAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCGCCTCTGGCTCCTGCTaGCCGCTGGCCTCCAAGATG +
Preference number: 3 (lower is better)
Translates to: GQPRVVIHADEDARGLALASGSC*PLASKM
Trigger: CATCTTGGAGGCCAGCGGCAAGCAGGAGCCAGAGGC...GAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
3UTR-3UTR CAA 90 bp TCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCTCCTCCGCCTCTGGCTCCTGCTaGCCGCTGGCCTCCAAGATG +
Preference number: 3 (lower is better)
Translates to: SSSMLMKMPGVSHSGPSSASGSC*PLASKM
Trigger: CATCTTGGAGGCCAGCGGCAAGCAGGAGCCAGAGGC...GGAGGAGGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
3UTR TCA 72 bp GATCAGGAGCTCTCCAGGGTTCAGCGGGGACAAGGCTaGGTTTCCCTCACCATGCTGGGTGCCCAGCAGGCG +
Preference number: 3 (lower is better)
Translates to: DQELSRVQRGQG*VSLTMLGAQQA
Trigger: CGCCTGCTGGGCACCCAGCATGGTGAGGGAAACTCAGCCTTGTCCCCGCTGAACCCTGGAGAGCTCCTGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR GCA 72 bp CAGCCCTGGCCTATGAGCCTGGAGATCTTTCCTCCCTaGTGGTCTCCCACGAGAGGCCTTGGTGCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: QPWPMSLEIFPP*WSPTRGLGASW
Trigger: CCAGGAGGCACCAAGGCCTCTCGTGGGAGACCAGCAGGGAGGAAAGATCTCCAGGCTCATAGGCCAGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 72 bp ATGACGGTCCTCATGAGCAGCATGGGCAGGGGGCTCTaGTCCATCAGCTGCTGCATCACCACGGCCAGCACC +
Preference number: 3 (lower is better)
Translates to: MTVLMSSMGRGL*SISCCITTAST
Trigger: GGTGCTGGCCGTGGTGATGCAGCAGCTGATGGAGCAGAGCCCCCTGCCCATGCTGCTCATGAGGACCGTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR CCA 72 bp GTGAGGGTGTCCAGCTCCGTGGGACAGGATGGCTCCTaGCCCAGAAACCTTGCTCAGGAGGGATGGAGGGGT +
Preference number: 3 (lower is better)
Translates to: VRVSSSVGQDGS*PRNLAQEGWRG
Trigger: ACCCCTCCATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTGGACACCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 72 bp GGCGACAGTGAGGGTGTCCAGCTCCGTGGGACAGGATaGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATG +
Preference number: 3 (lower is better)
Translates to: GDSEGVQLRGTG*LLAQKPCSGGM
Trigger: CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTGGACACCCTCACTGTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CAA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGGGAGAAAAACTTGGGTaGGGTGCTGGGGACACCAGC +
Preference number: 3 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQGEKLG*GAGDTS
Trigger: GCTGGTGTCCCCAGCACCCAACCCAAGTTTTTCTCC...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR TCA 72 bp GGGCCTGGGAGCGCACCTTGTCCTTCTCATGGGAGCTaGGGTCGAGGAGGACATGCAGGTACTGGAACTGGC +
Preference number: 3 (lower is better)
Translates to: GPGSAPCPSHGS*GRGGHAGTGTG
Trigger: GCCAGTTCCAGTACCTGCATGTCCTCCTCGACCTCAGCTCCCATGAGAAGGACAAGGTGCGCTCCCAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR GCA 72 bp ACCCTCAAGAAACAAGGTCAAATTCCCACCTCGGCCTaGGAGACTCCTGTGTGGGCAGGCCCCAGGGGCACC +
Preference number: 3 (lower is better)
Translates to: TLKKQGQIPTSA*ETPVWAGPRGT
Trigger: GGTGCCCCTGGGGCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTTGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 72 bp ACTCCTCCCGGCTTCAGCTTCTGTTCCTCCTCCAGCTaGCGCTTTAAGGCCTTCTCCTGGGCCAGTCGCAGG +
Preference number: 3 (lower is better)
Translates to: TPPGFSFCSSSS*RFKAFSWASRR
Trigger: CCTGCGACTGGCCCAGGAGAAGGCCTTAAAGCGGCAGCTGGAGGAGGAACAGAAGCTGAAGCCGGGAGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
3UTR CCA 72 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTaGGTTACATGGCCCCTCTGGGCTGCCCAGTCCCAG +
Preference number: 3 (lower is better)
Translates to: FREVFPDVPHPG*VTWPLWAAQSQ
Trigger: CTGGGACTGGGCAGCCCAGAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 72 bp CAGCCCATTGAGCACCGGGATGAGGAAGCGGACGTCTaGCAGTCGCTTGTGGTAGAGATCCCGGACCCGCTT +
Preference number: 3 (lower is better)
Translates to: QPIEHRDEEADV*QSLVVEIPDPL
Trigger: AAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCAGACGTCCGCTTCCTCATCCCGGTGCTCAATGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR CCA 72 bp GTCTTCATAGCATCTTCTCCAACAGGTGCGAGGGTCTaGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCC +
Preference number: 3 (lower is better)
Translates to: VFIASSPTGARV*GLRSSFKVSPP
Trigger: GGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACCTGTTGGAGAAGATGCTATGAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR GCA 72 bp AGCTCCGGGGAGTTCATGCCCATTCCTCGGATCGGCTaGTCAATGACCCTCAGCACCGTCCGCTTGATGTCG +
Preference number: 3 (lower is better)
Translates to: SSGEFMPIPRIG*SMTLSTVRLMS
Trigger: CGACATCAAGCGGACGGTGCTGAGGGTCATTGAGCAGCCGATCCGAGGAATGGGCATGAACTCCCCGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR CCA 72 bp GAGATCCCGGACCCGCTTCACCAGCTCTGGGGAGGGTaGGACTTTGTCTGTGAGGCTGTGCAGACATCTCGT +
Preference number: 3 (lower is better)
Translates to: EIPDPLHQLWGG*DFVCEAVQTSR
Trigger: ACGAGATGTCTGCACAGCCTCACAGACAAAGTCCCACCCTCCCCAGAGCTGGTGAAGCGGGTCCGGGATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR CCA 72 bp CTTGTGGTAGAGATCCCGGACCCGCTTCACCAGCTCTaGGGAGGGTGGGACTTTGTCTGTGAGGCTGTGCAG +
Preference number: 3 (lower is better)
Translates to: LVVEIPDPLHQL*GGWDFVCEAVQ
Trigger: CTGCACAGCCTCACAGACAAAGTCCCACCCTCCCCAGAGCTGGTGAAGCGGGTCCGGGATCTCTACCACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR TCA 72 bp CTCCATCAGCTGCTGCATCACCACGGCCAGCACCTCTaGCGTGTACACGTTCCGCTCCGCAAAGCACAGGTT +
Preference number: 3 (lower is better)
Translates to: LHQLLHHHGQHL*RVHVPLRKAQV
Trigger: AACCTGTGCTTTGCGGAGCGGAACGTGTACACGTCAGAGGTGCTGGCCGTGGTGATGCAGCAGCTGATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR CCA 72 bp GCTGCCCAGTCCCAGGCCACCCCTCTCAGTTGTTACTaGCCAGGGACTTCTTGTCTCTCCCTGGACTGTAAG +
Preference number: 3 (lower is better)
Translates to: AAQSQATPLSCY*PGTSCLSLDCK
Trigger: CTTACAGTCCAGGGAGAGACAAGAAGTCCCTGGCCAGTAACAACTGAGAGGGGTGGCCTGGGACTGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CAA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGGAGAAAAACTTGGGTaGGGTGCTGGGGACACCAGC +
Preference number: 3 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLGEKLG*GAGDTS
Trigger: GCTGGTGTCCCCAGCACCCAACCCAAGTTTTTCTCC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CAA 90 bp CTCCTGCTTGCCGCTGGCCTCCAAGATGGTCATGATGGAGTTAGGGATGTGAGCCTCAGCACCGTCCGCTaGATGTCGGCGATGGCTTCA +
Preference number: 3 (lower is better)
Translates to: LLLAAGLQDGHDGVRDVSLSTVR*MSAMAS
Trigger: TGAAGCCATCGCCGACATCAAGCGGACGGTGCTGAG...GCTCACATCCCTAACTCCATCATGACCATCTTGGAGGCCAGCGGCAAGCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR CAA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGCGTTTCTCAGAGAACTaGCAGAGGAAGGTTAGGAAG +
Preference number: 3 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKRFSEN*QRKVRK
Trigger: CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACG...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CAA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGCGTTTCTCAGAGAACTaGCAGAGGAAGGTTAGGAAG +
Preference number: 3 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLRFSEN*QRKVRK
Trigger: CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACG...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR TCA 72 bp ACGGTGGGTTGGGGTGCACCAGGAGCTGCAGGTAGTTaGGGGCAAATTTCTCCACATACTCCCGCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: TVGWGAPGAAGS*GQISPHTPAAA
Trigger: AGCAGCTGCGGGAGTATGTGGAGAAATTTGCCCTCAACTACCTGCAGCTCCTGGTGCACCCCAACCCACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR GCA 72 bp AGCTCTGGGGAGGGTGGGACTTTGTCTGTGAGGCTGTaGAGACATCTCGTGACCAGTGTCTCTGCTCCCTTG +
Preference number: 3 (lower is better)
Translates to: SSGEGGTLSVRL*RHLVTSVSAPL
Trigger: CAAGGGAGCAGAGACACTGGTCACGAGATGTCTGCACAGCCTCACAGACAAAGTCCCACCCTCCCCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR CAA 90 bp GTGTACACGTTCCGCTCCGCAAAGCACAGGTTGGTGGCTTTGATGATGGATTTCGCCTGGGAGCGCACCTaGTCCTTCTCATGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: VYTFRSAKHRLVALMMDFAWERT*SFSWEL
Trigger: CAGCTCCCATGAGAAGGACAAGGTGCGCTCCCAGGC...GAAATCCATCATCAAAGCCACCAACCTGTGCTTTGCGGAGCGGAACGTGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR CAA 90 bp CTCCTGCTTGCCGCTGGCCTCCAAGATGGTCATGATGGAGTTAGGGATGTGAGCTTCTTCTCCAGCCCATaGAGCACCGGGATGAGGAAG +
Preference number: 3 (lower is better)
Translates to: LLLAAGLQDGHDGVRDVSFFSSP*STGMRK
Trigger: CTTCCTCATCCCGGTGCTCAATGGGCTGGAGAAGAA...GCTCACATCCCTAACTCCATCATGACCATCTTGGAGGCCAGCGGCAAGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR TCA 72 bp AAAGGACAGCAGTCTTCTGAGTATAGAGGGCGACAGTaGGGGTGTCCAGCTCCGTGGGACAGGATGGCTCCT +
Preference number: 3 (lower is better)
Translates to: KGQQSSEYRGRQ*GCPAPWDRMAP
Trigger: AGGAGCCATCCTGTCCCACGGAGCTGGACACCCTCACTGTCGCCCTCTATACTCAGAAGACTGCTGTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CAA 90 bp GACCTGGAAGCTCTGGGGCTTTGTGCGCTGGCAGCACTTGATGAAGCCCTCCCACACAGGTTGGTGGCTTaGATGATGGATTTCATGTCG +
Preference number: 3 (lower is better)
Translates to: DLEALGLCALAALDEALPHRLVA*MMDFMS
Trigger: CGACATGAAATCCATCATCAAAGCCACCAACCTGTG...TGGGAGGGCTTCATCAAGTGCTGCCAGCGCACAAAGCCCCAGAGCTTCCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR GCA 72 bp TGTGAGGCTGTGCAGACATCTCGTGACCAGTGTCTCTaGTCCCTTGGGACAATTTTCCACCAGCAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: CEAVQTSRDQCL*SLGTIFHQQEQ
Trigger: CTGCTCCTGCTGGTGGAAAATTGTCCCAAGGGAGCAGAGACACTGGTCACGAGATGTCTGCACAGCCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR-3UTR CAA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATCCACTTAGCTTCTGCTaGGCCCTGAGTAAGTCACCT +
Preference number: 3 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYPLSFC*ALSKSP
Trigger: AGGTGACTTACTCAGGGCCAAGCAGAAGCTAAGTGG...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 72 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTaGACAACAAAAGGACTCGACTTTGTGATCTGGAGC +
Preference number: 3 (lower is better)
Translates to: PEEQGGLRGSEQ*TTKGLDFVIWS
Trigger: GCTCCAGATCACAAAGTCGAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 72 bp GTGATCTGGAGCTTAGAGTGCAACCAGGAAGACTGCTaGTGCCTGAGCAGGAGAAAAACTTGGGTTGGGTGC +
Preference number: 3 (lower is better)
Translates to: VIWSLECNQEDC*CLSRRKTWVGC
Trigger: GCACCCAACCCAAGTTTTTCTCCTGCTCAGGCACCAGCAGTCTTCCTGGTTGCACTCTAAGCTCCAGATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CAA 90 bp CTCCTGCTTGCCGCTGGCCTCCAAGATGGTCATGATGGAGTTAGGGATGTGAGCTTCACGGAGTCAATGTaGTGTAATGCGATCAGGAGC +
Preference number: 3 (lower is better)
Translates to: LLLAAGLQDGHDGVRDVSFTESM*CNAIRS
Trigger: GCTCCTGATCGCATTACACAACATTGACTCCGTGAA...GCTCACATCCCTAACTCCATCATGACCATCTTGGAGGCCAGCGGCAAGCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR TCA 72 bp GCACTACCCAGGATGGATATGGGTGAGCAGAGGTGCTaGCTTTTCTTAATGCTGGACTACCAGGAGTGGGTC +
Preference number: 3 (lower is better)
Translates to: ALPRMDMGEQRC*LFLMLDYQEWV
Trigger: GACCCACTCCTGGTAGTCCAGCATTAAGAAAAGTCAGCACCTCTGCTCACCCATATCCATCCTGGGTAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 72 bp ACGATGGGGTTGAGTTTGATGAGTTTAGGCAGGGCCTaGATCACCTCTTTCTTCTCCAGCCCATTGAGCACC +
Preference number: 3 (lower is better)
Translates to: TMGLSLMSLGRA*ITSFFSSPLST
Trigger: GGTGCTCAATGGGCTGGAGAAGAAAGAGGTGATCCAGGCCCTGCCTAAACTCATCAAACTCAACCCCATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
3UTR TCA 72 bp TCCTGTGTCCCCAGCACTACCCAGGATGGATATGGGTaGGCAGAGGTGCTGACTTTTCTTAATGCTGGACTA +
Preference number: 3 (lower is better)
Translates to: SCVPSTTQDGYG*AEVLTFLNAGL
Trigger: TAGTCCAGCATTAAGAAAAGTCAGCACCTCTGCTCACCCATATCCATCCTGGGTAGTGCTGGGGACACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 72 bp TTTGTGATCTGGAGCTTAGAGTGCAACCAGGAAGACTaGTGGTGCCTGAGCAGGAGAAAAACTTGGGTTGGG +
Preference number: 3 (lower is better)
Translates to: FVIWSLECNQED*WCLSRRKTWVG
Trigger: CCCAACCCAAGTTTTTCTCCTGCTCAGGCACCAGCAGTCTTCCTGGTTGCACTCTAAGCTCCAGATCACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 72 bp TTTCTTCTGGACCTAGGATCCTCAGGGCTTCTAATCTaGGTCCACAAATGGCCTTGGGGTGTGTGTGTGTAT +
Preference number: 3 (lower is better)
Translates to: FLLDLGSSGLLI*VHKWPWGVCVY
Trigger: ATACACACACACACCCCAAGGCCATTTGTGGACCCAGATTAGAAGCCCTGAGGATCCTAGGTCCAGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 72 bp GAACAGTGCACAACAAAAGGACTCGACTTTGTGATCTaGAGCTTAGAGTGCAACCAGGAAGACTGCTGGTGC +
Preference number: 3 (lower is better)
Translates to: EQCTTKGLDFVI*SLECNQEDCWC
Trigger: GCACCAGCAGTCTTCCTGGTTGCACTCTAAGCTCCAGATCACAAAGTCGAGTCCTTTTGTTGTGCACTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 72 bp AGCCTGAAGGGTGTTTTGGAAAGCTCAGACCTGACTTaGCTCCCAGAGACCCTCAAGAAACAAGGTCAAATT +
Preference number: 3 (lower is better)
Translates to: SLKGVLESSDLT*LPETLKKQGQI
Trigger: AATTTGACCTTGTTTCTTGAGGGTCTCTGGGAGGCAAGTCAGGTCTGAGCTTTCCAAAACACCCTTCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CAA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCCTCCCACGAGAGGCCTaGGTGCCTCCTGGGTTTTAT +
Preference number: 3 (lower is better)
Translates to: CVCVNPLKLYANNMSILSLPREA*VPPGFY
Trigger: ATAAAACCCAGGAGGCACCAAGGCCTCTCGTGGGAG...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR-3UTR CAA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGCCACTTAGCTTCTGCTaGGCCCTGAGTAAGTCACCT +
Preference number: 3 (lower is better)
Translates to: VCVNPLKLYANNMSILSWPLSFC*ALSKSP
Trigger: AGGTGACTTACTCAGGGCCAAGCAGAAGCTAAGTGG...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 72 bp TCAGATTCTGTTTCTTCTACCACACCACTTAGCTTCTaGTTGGCCCTGAGTAAGTCACCTAACCTCTCTGGA +
Preference number: 3 (lower is better)
Translates to: SDSVSSTTPLSF*LALSKSPNLSG
Trigger: TCCAGAGAGGTTAGGTGACTTACTCAGGGCCAAGCAGAAGCTAAGTGGTGTGGTAGAAGAAACAGAATCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 72 bp CTGTATGCAAATAATATGAGCATACTGTCCTGGGAATaGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCG +
Preference number: 3 (lower is better)
Translates to: LYANNMSILSWE*ARTFLRSPKGS
Trigger: CGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAGTATGCTCATATTATTTGCATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR GCA 72 bp GCTGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTaGAGAGGAAGGTTAGGAAGTAAGTCACTGAAAAGC +
Preference number: 3 (lower is better)
Translates to: AALLTLNVSQRT*RGRLGSKSLKS
Trigger: GCTTTTCAGTGACTTACTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CCA 72 bp CTCAAACTGTATGCAAATAATATGAGCATACTGTCCTaGGAATGGGCTAGAACTTTCCTCAGATCACCAAAG +
Preference number: 3 (lower is better)
Translates to: LKLYANNMSILS*EWARTFLRSPK
Trigger: CTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GGGCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCTATGCGGACCTGGGCTaGCCCGCTGCAGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: GPGRADGEGEGEEEEGAPYADLG*PAAGHS
Trigger: GCTGTGGCCTGCAGCGGGGCAGCCCAGGTCCGCATA...GGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GGGCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCGCCGAGCCAGGTGCTTaGTCTGGGCTTCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GPGRADGEGEGEEEEGAPAEPGA*SGLPCL
Trigger: CAGGCACGGAAGCCCAGATCAAGCACCTGGCTCGGC...GGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACACGGCTCCCAGCTGCTaGGGCGGCAGCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: AWPGRRRGRGGGRGGGSHTAPSC*GGSCRM
Trigger: CATCCTGCAGCTGCCGCCCCAGCAGCTGGGAGCCGT...GTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CCA 90 bp GCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACCCGCTGCCGTCTCCTTaGGTAGGGGGCCCTCGAGAC +
Preference number: 4 (lower is better)
Translates to: AWPGRRRGRGGGRGGGSHPLPSP*VGGPRD
Trigger: GTCTCGAGGGCCCCCTACCCAAGGAGACGGCAGCGG...GTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp AGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGTCTCCTGGCCTCGGGTTCCCTaGCGTCCTCGGCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RVWGLRSSFKVSPPAAVSWPRVP*RPRQPG
Trigger: GCCCGGCTGCCGAGGACGCCAGGGAACCCGAGGCCA...GGAGACGGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCCATCGCGGGGCCGCTTaGGGGTGTCCTTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GARVWGLRSSFKVSPPAAHRGAA*GCPCCS
Trigger: CGAGCAGCAAGGACACCCGCAAGCGGCCCCGCGATG...GGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp CGGGCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCGGAAGGAGGCTGGCATaGCCTCGGGTAGGTACACCA +
Preference number: 4 (lower is better)
Translates to: RAWPGRRRGRGGGRGGGSGRRLA*PRVGTP
Trigger: TGGTGTACCTACCCGAGGCCATGCCAGCCTCCTTCC...GGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCCGCACACTGCTCACCTaGGATTTGGCCAGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: GARVWGLRSSFKVSPPAARTLLT*DLASVG
Trigger: CCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCG...GGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGAGTTTCCCTCACCATaGTGGGTGCCCAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: GARVWGLRSSFKVSPPAAEFPSP*WVPSRR
Trigger: CCGCCTGCTGGGCACCCAGCATGGTGAGGGAAACTC...GGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp AGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGTCTCCACCACCGAGATGGCTTaGCCCTGGGCTGACAGGCGC +
Preference number: 4 (lower is better)
Translates to: RVWGLRSSFKVSPPAAVSTTEMA*PWADRR
Trigger: GCGCCTGTCAGCCCAGGGCCAAGCCATCTCGGTGGT...GGAGACGGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GGGCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCCAGCTCTGGGGAGGGTaGGACTTTGTCTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GPGRADGEGEGEEEEGAPQLWGG*DFVCEA
Trigger: AGCCTCACAGACAAAGTCCCACCCTCCCCAGAGCTG...GGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GGGCTCCAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGACGGCTCCCAGCTGCTaGGGCGGCAGCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GLQIILLQGPRRRLLGLWTAPSC*GGSCRM
Trigger: CATCCTGCAGCTGCCGCCCCAGCAGCTGGGAGCCGT...CCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTGGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGACTGAGGTCCTGCCCTaGCGTCGCAGGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: APRQGQVVTGPACSATPRTEVLP*RRRGQA
Trigger: GGCCTGGCCCCTGCGACGCCAGGGCAGGACCTCAGT...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGGGCTTGGCCCTGGGCTaGCAGGCGCCGCTTGATCAG +
Preference number: 4 (lower is better)
Translates to: APRQGQVVTGPACSATPRGLALG*QAPLDQ
Trigger: CTGATCAAGCGGCGCCTGTCAGCCCAGGGCCAAGCC...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TCCTCCCGGAAATCCATGGCTTCCTCAGACGGGGGCGGGCCTGGCCGGGCCGACTGCTGCTCGGCATGTTaGGGGCGATCTCGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SSRKSMASSDGGGPGRADCCSAC*GRSRPE
Trigger: CTCAGGCCGAGATCGCCCGCAACATGCCGAGCAGCA...GTCGGCCCGGCCAGGCCCGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACATGAGCCGAGCCAGGTaGTTGATCTGGGCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: AWPGRRRGRGGGRGGGSHMSRAR*LIWASV
Trigger: CACGGAAGCCCAGATCAAGCACCTGGCTCGGCTCAT...GTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGCCTGGGCTGCCCCGCTaGAGGCCACAGCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: APRQGQVVTGPACSATPRPGLPR*RPQPSQ
Trigger: CTGAGAAGGCTGTGGCCTGCAGCGGGGCAGCCCAGG...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCCATCCTCGCAGTACTTaGGGACCACCTCCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GARVWGLRSSFKVSPPAAHPRST*GPPPGH
Trigger: GTGCCCTGGAGGTGGTCCGCAAGTACTGCGAGGATG...GGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp AGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGTCTCCCCTCTGGCTCCTGCTTaGCGCTGGCCTCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: RVWGLRSSFKVSPPAAVSPLAPA*RWPPRW
Trigger: CCATCTTGGAGGCCAGCGGCAAGCAGGAGCCAGAGG...GGAGACGGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp CGGGCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCAGCTGCAGGATGACCTaGAAGCTCTGGGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: RAWPGRRRGRGGGRGGGSSCRMT*KLWGFV
Trigger: CACAAAGCCCCAGAGCTTCCAGGTCATCCTGCAGCT...GGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CCA 90 bp TCCTCCCGGAAATCCATGGCTTCCTCAGACGGGGGCGGGCCTGGCCGGGCCGACGGGCTCCCGGAGCTCTaGGCACTTGTCAAAGACGGC +
Preference number: 4 (lower is better)
Translates to: SSRKSMASSDGGGPGRADGLPEL*ALVKDG
Trigger: GCCGTCTTTGACAAGTGCCCAGAGCTCCGGGAGCCC...GTCGGCCCGGCCAGGCCCGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CCA 90 bp GGGCTCCAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGTGGGGGCAGCTCTGGTaGGGGGTGAAGGAGCGGACA +
Preference number: 4 (lower is better)
Translates to: GLQIILLQGPRRRLLGLWWGQLW*GVKERT
Trigger: TGTCCGCTCCTTCACCCCCCACCAGAGCTGCCCCCA...CCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTGGAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000596824.1
CDS-3UTR CCA 90 bp TCCTCCCGGAAATCCATGGCTTCCTCAGACGGGGGCGGGCCTGGCCGGGCCGACTGTGAGCTTGCTGGGTaGAGAGCAGGAAGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: SSRKSMASSDGGGPGRADCELAG*RAGRGR
Trigger: GCGCCCCCTTCCTGCTCTCCACCCAGCAAGCTCACA...GTCGGCCCGGCCAGGCCCGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000596824.1
CDS-3UTR TCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGCCACGCTCCGACGGGTaGCGCTGTCTCCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQPRSDG*RCLHCR
Trigger: GCGGCAGTGGAGACAGCGTCACCCGTCGGAGCGTGG...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCCCACGCTCCGACGGGTaGCGCTGTCTCCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: PESSSMLMKMPGVSHSGPPRSDG*RCLHCR
Trigger: GCGGCAGTGGAGACAGCGTCACCCGTCGGAGCGTGG...GGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACGGGCGATCTCGGCCTaGGGTGTGCCCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPRAISA*GVPRST
Trigger: GGTGGACCTGGGCACACCTCAGGCCGAGATCGCCCG...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGAGCCGAGCCAGGTGCTTaGTCTGGGCTTCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGAEPGA*SGLPCL
Trigger: CAGGCACGGAAGCCCAGATCAAGCACCTGGCTCGGC...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GGTCAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCCCAGTCGCAGGCCGATaGGGTCCTGAGGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GQPRVVIHADEDARGLALPVAGR*GPEGAG
Trigger: CCCGGCCCCCTCAGGACCTCATCGGCCTGCGACTGG...GAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR TCA 90 bp GCCTGGGAGCGCACCTTGTCCTTCTCATGGGAGCTGAGGTCGAGGAGGACATGCCCAGTCGCAGGCCGATaGGGTCCTGAGGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: AWERTLSFSWELRSRRTCPVAGR*GPEGAG
Trigger: CCCGGCCCCCTCAGGACCTCATCGGCCTGCGACTGG...GCATGTCCTCCTCGACCTCAGCTCCCATGAGAAGGACAAGGTGCGCTCCCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GGGCTCCAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGTGCGGGTGTCCTTGCTaGTCGGCATGTTGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: GLQIILLQGPRRRLLGLWCGCPC*SACCGR
Trigger: TCGCCCGCAACATGCCGAGCAGCAAGGACACCCGCA...CCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTGGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GGGCTCCAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGTGCTGGGGCGGCAGCTaGAGGATGACCTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GLQIILLQGPRRRLLGLWCWGGS*RMTWKL
Trigger: GAGCTTCCAGGTCATCCTGCAGCTGCCGCCCCAGCA...CCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTGGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR GCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGATGGCCCCTCTGGGCTaGCCAGTCCCAGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKMAPLG*PVPGHP
Trigger: GGGGTGGCCTGGGACTGGGCAGCCCAGAGGGGCCAT...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCTCTGGCGGGCGATATTaGCAAGGGAGCCCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: DGEGEGEEEEGAPTPPGFSGGRY*QGSPAL
Trigger: CAGCGCTGGGCTCCCTTGCCAATATCGCCCGCCAGA...GAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GGGCTCCAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGTGCTCACCTGCGATTTaGCCAGCGTCGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GLQIILLQGPRRRLLGLWCSPAI*PASGAG
Trigger: ACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCA...CCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTGGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GGGCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCCCTCCTTGCACTGTTTaGTCTGCTCTACACCTGGTC +
Preference number: 4 (lower is better)
Translates to: GPGRADGEGEGEEEEGAPPPCTV*SALHLV
Trigger: GACCAGGTGTAGAGCAGACCAAACAGTGCAAGGAGG...GGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp AGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGTCTCCTGCAGGTACTGGAACTaGCGGGACGGGCGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RVWGLRSSFKVSPPAAVSCRYWN*RDGRLK
Trigger: CTTCAAGCGCCCGTCCCGCCAGTTCCAGTACCTGCA...GGAGACGGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp CCTCCCGGAAATCCATGGCTTCCTCAGACGGGGGCGGGCCTGGCCGGGCCGACGAAACAGCACAGACGGTaGGTTGGGGTGCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: PPGNPWLPQTGAGLAGPTKQHRR*VGVHQE
Trigger: CTCCTGGTGCACCCCAACCCACCGTCTGTGCTGTTT...CGTCGGCCCGGCCAGGCCCGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAGTGCCCTGGAGCCCTaGGTCTGCCCTGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPSALEP*VCPAAA
Trigger: CGCAGCAGCAGGGCAGACCCAGGGCTCCAGGGCACT...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCGGAGGGATGGAGGGGTaGGCGCTCTCAGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPGGMEG*ALSGEV
Trigger: CACCTCCCCTGAGAGCGCCCACCCCTCCATCCCTCC...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCCCACGCTCCGACGGGTaGCGCTGTCTCCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVPRSDG*RCLHCR
Trigger: GCGGCAGTGGAGACAGCGTCACCCGTCGGAGCGTGG...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGCTCCTGGGCCCTCCACAAACTTaGTGGCGTGGGTGCGGATGC +
Preference number: 4 (lower is better)
Translates to: QIILLQGPRRRLLGLWLLGPPQT*WRGCGC
Trigger: GCATCCGCACCCACGCCATCAAGTTTGTGGAGGGCC...CAGGAGCCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCCGGGCGATCTCGGCCTaGGGTGTGCCCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVRAISA*GVPRST
Trigger: GGTGGACCTGGGCACACCTCAGGCCGAGATCGCCCG...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CGGGCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCCAGCTTCATCTTCTTaGGTGTGGAGTCCGAGTCAT +
Preference number: 4 (lower is better)
Translates to: RAWPGRRRGRGGGRGGGSPASSS*VWSPSH
Trigger: ATGACTCGGACTCCACACTCAAGAAGATGAAGCTGG...GGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp AGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGTCTCCGCAGGAACTCAGCTGTaGTGTCCGTGTCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: RVWGLRSSFKVSPPAAVSAGTQL*CPCLTG
Trigger: GCCAGTCAGACACGGACATCACAGCTGAGTTCCTGC...GGAGACGGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGGGCGGGACGGGCGCTTaGAGATCAGGTCTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: APRQGQVVTGPACSATPRGGTGA*RSGLEV
Trigger: CACTTCGAGACCTGATCTTCAAGCGCCCGTCCCGCC...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGGTGGGGGCATGTGGGTaGCTGAGGTCCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLVGACG*LRSCPG
Trigger: GCCAGGGCAGGACCTCAGTCACCCACATGCCCCCAC...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGGAGTGGGGGCCATCGTaGGGCGGCCAGTTCGTCACC +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKEWGPS*GGQFVT
Trigger: GGTGACGAACTGGCCGCCTCACGATGGCCCCCACTC...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGGCCGCTCGCCATGGCTaGTGTCAGCGCAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLAARHG*CQRSSG
Trigger: GCCAGAGCTGCGCTGACAGCAGCCATGGCGAGCGGC...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599460.5
CDS-3UTR GCA 90 bp GGGCTCCAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGTCTCTGAGGTGGTCATaGCATCGATGCCCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GLQIILLQGPRRRLLGLWSLRWS*HRCPAP
Trigger: AGGGGCCGGGCATCGATGGCATGACCACCTCAGAGA...CCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCTCCAAGGAAGCCGGGTaGTTCAGCACACTCAACAGG +
Preference number: 4 (lower is better)
Translates to: GARVWGLRSSFKVSPPAASKEAG*FSTLNR
Trigger: CCTGTTGAGTGTGCTGAAGCACCCGGCTTCCTTGGA...GGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGCATCGCGGGGCCGCTTaGGGGTGTCCTTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLHRGAA*GCPCCS
Trigger: CGAGCAGCAAGGACACCCGCAAGCGGCCCCGCGATG...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCCCTGGGCTGCCCCGCTaGAGGCCACAGCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PESSSMLMKMPGVSHSGPPGLPR*RPQPSQ
Trigger: CTGAGAAGGCTGTGGCCTGCAGCGGGGCAGCCCAGG...GGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGGGTACTTCCACACCTaGTTCATGATGAGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: GARVWGLRSSFKVSPPAAGYFHT*FMMRRD
Trigger: GTCCCGCCTCATCATGAAGCAGGTGTGGAAGTACCC...GGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGTGTTCCTCCTCCAGCTaGCGCTTTAAGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VRGSGGSAPPSRSARPLPCSSSS*RFKAFS
Trigger: GGAGAAGGCCTTAAAGCGGCAGCTGGAGGAGGAACA...CGGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGAGGTCTGCCCTGCTGCTaGGCCTCTACCACTCACGGT +
Preference number: 4 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGGLPCC*ASTTHG
Trigger: ACCGTGAGTGGTAGAGGCGCAGCAGCAGGGCAGACC...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCATGGCCCCTCTGGGCTaGCCAGTCCCAGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVMAPLG*PVPGHP
Trigger: GGGGTGGCCTGGGACTGGGCAGCCCAGAGGGGCCAT...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGCTGTCAGCGCAGCTCTaGCCTCCGTTCCCCTCGCGC +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKLSAQL*PPFPSR
Trigger: GCGCGAGGGGAACGGAGGCCAGAGCTGCGCTGACAG...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599460.5
CDS-3UTR CCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATCTGGCGGGCGATATTaGCAAGGGAGCCCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGSGGRY*QGSPAL
Trigger: CAGCGCTGGGCTCCCTTGCCAATATCGCCCGCCAGA...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCGGTCCCCGACGGGCCTaGCTCCAAGTCTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: EGEGEEEEGAPTPPGFSFGPRRA*LQVFVL
Trigger: GAGGACAAAGACTTGGAGCCAGGCCCGTCGGGGACC...GAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TCCTCCCGGAAATCCATGGCTTCCTCAGACGGGGGCGGGCCTGGCCGGGCCGACATGTCCGTGTCTGACTaGCCGGAGATCTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: SSRKSMASSDGGGPGRADMSVSD*PEICAE
Trigger: CTCAGCGCAGATCTCCGGCCAGTCAGACACGGACAT...GTCGGCCCGGCCAGGCCCGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGCCACGGGGGTGTAGATaGCCTGGAAGGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: APRQGQVVTGPACSATPRPRGCR*PGRRLA
Trigger: TGCCAGCCTCCTTCCAGGCCATCTACACCCCCGTGG...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAACAGGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGGCCAGGTGCTTGATCTaGGCTTCCGTGCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: QQVRGSGGSAPPSRSARPARCLI*ASVPAD
Trigger: GTCAGCAGGCACGGAAGCCCAGATCAAGCACCTGGC...CGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACCTGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGAAGGACATGCAGGTACTaGAACTGGCGGGACGGGCGC +
Preference number: 4 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGRTCRY*NWRDGR
Trigger: GCGCCCGTCCCGCCAGTTCCAGTACCTGCATGTCCT...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCGCACAGACGGTGGGTTaGGGTGCACCAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: EGEGEEEEGAPTPPGFSFAQTVG*GAPGAA
Trigger: TGCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGC...GAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGTCCAGTGGGGGCATGTaGGTGACTGAGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: APRQGQVVTGPACSATPRSSGGM*VTEVLP
Trigger: GGGCAGGACCTCAGTCACCCACATGCCCCCACTGGA...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCATGCGAGACTCCTGTGTaGGCAGGCCCCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPCETPV*AGPRGT
Trigger: GGTGCCCCTGGGGCCTGCCCACACAGGAGTCTCGCA...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCGGCCCTCCACAAACTTaGTGGCGTGGGTGCGGATGC +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPGPPQT*WRGCGC
Trigger: GCATCCGCACCCACGCCATCAAGTTTGTGGAGGGCC...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGAGCGCTGTGGTCAGGTTaGTGGAGGAGATGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGALWSG*WRRWQG
Trigger: ACCCTGCCATCTCCTCCATCAACCTGACCACAGCGC...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GGGCTCCAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGGGATCACCTCAGACATaGACATGGGTCTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: GLQIILLQGPRRRLLGLWGSPQT*TWVSGG
Trigger: CCCGCCAGAGACCCATGTTCATGTCTGAGGTGATCC...CCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCGCCGGAGATCTGCGCTaGGGCCTTCGAGGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVAGDLR*GLRGPR
Trigger: TCGGGGACCTCGAAGGCCTCAGCGCAGATCTCCGGC...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCTCCTCCGCCGGAGATCTGCGCTaGGGCCTTCGAGGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: SSSMLMKMPGVSHSGPSSAGDLR*GLRGPR
Trigger: TCGGGGACCTCGAAGGCCTCAGCGCAGATCTCCGGC...GGAGGAGGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp CAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGCTCCTGTGTGATGTCCGTGTCTaGCTGGCCGGAGATCTGCGC +
Preference number: 4 (lower is better)
Translates to: QIILLQGPRRRLLGLWLLCDVRV*LAGDLR
Trigger: GCGCAGATCTCCGGCCAGTCAGACACGGACATCACA...CAGGAGCCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGACTGACAGGCGCCGCTTaGTCAGGACGCTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGLTGAA*SGRSLS
Trigger: AGACAGAGAGCGTCCTGATCAAGCGGCGCCTGTCAG...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGCTCCTGCTGACAGGCGCCGCTTaGTCAGGACGCTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: QIILLQGPRRRLLGLWLLLTGAA*SGRSLS
Trigger: AGACAGAGAGCGTCCTGATCAAGCGGCGCCTGTCAG...CAGGAGCCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp CAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGGGCTTGGCCCTGGGCTaGCAGGCGCCGCTTGATCAG +
Preference number: 4 (lower is better)
Translates to: QPRVVIHADEDARGLALRGLALG*QAPLDQ
Trigger: CTGATCAAGCGGCGCCTGTCAGCCCAGGGCCAAGCC...CCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GGGCTCCAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGCCTTCTCATGGGAGCTaGGGTCGAGGAGGACATGCA +
Preference number: 4 (lower is better)
Translates to: GLQIILLQGPRRRLLGLWPSHGS*GRGGHA
Trigger: TGCATGTCCTCCTCGACCTCAGCTCCCATGAGAAGG...CCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCCAGCGGGGACAAGGCTaGGTTTCCCTCACCATGCTG +
Preference number: 4 (lower is better)
Translates to: EGEGEEEEGAPTPPGFSFQRGQG*VSLTML
Trigger: CAGCATGGTGAGGGAAACTCAGCCTTGTCCCCGCTG...GAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp CCTCCCGGAAATCCATGGCTTCCTCAGACGGGGGCGGGCCTGGCCGGGCCGACGATGAACTTAAGCAGCTaGTCCAAGGCTGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PPGNPWLPQTGAGLAGPTMNLSS*SKAALP
Trigger: GGGCAAGGCAGCCTTGGAGCAGCTGCTTAAGTTCAT...CGTCGGCCCGGCCAGGCCCGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGTCTCGGCCTGAGGTGTaGCCAGGTCCACCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKSRPEV*PGPPAG
Trigger: CCCTGCTGGTGGACCTGGGCACACCTCAGGCCGAGA...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGTCTCGGCCTGAGGTGTaGCCAGGTCCACCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQSRPEV*PGPPAG
Trigger: CCCTGCTGGTGGACCTGGGCACACCTCAGGCCGAGA...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGGGCCTCCTCTTGGCCTaGGGTGCCTCTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQGLLLA*GASSSR
Trigger: CCTGGAGGAAGAGGCACCGCAGGCCAAGAGGAGGCC...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTCCTGGGCTGCCCCGCTaGAGGCCACAGCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVPGLPR*RPQPSQ
Trigger: CTGAGAAGGCTGTGGCCTGCAGCGGGGCAGCCCAGG...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACACATACTCCCGCAGCTaGTCCTTCTCATACATGCGT +
Preference number: 4 (lower is better)
Translates to: AWPGRRRGRGGGRGGGSHTYSRS*SFSYMR
Trigger: ACGCATGTATGAGAAGGAGCAGCTGCGGGAGTATGT...GTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp AGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGTCTCCCTCGGCCTCCCAAAGTaGAGGGATTACAGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: RVWGLRSSFKVSPPAAVSLGLPK*RDYRRE
Trigger: TTCACGCCTGTAATCCCTGCACTTTGGGAGGCCGAG...GGAGACGGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCGCAGGCAAGCTCTCCTaGCTCACCTACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPAGKLS*LTYPGP
Trigger: TGGGCCAGGGTAGGTGAGGCAGGAGAGCTTGCCTGC...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTGAGGGTTGTCTGGCCTaGAGCGTGCACGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVEGCLA*SVHAWA
Trigger: CGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTC...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGACCACCCTCTCTGAGGTaGTCATGCCATCGATGCCCG +
Preference number: 4 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGPPSLR*SCHRCP
Trigger: CGGGCATCGATGGCATGACCACCTCAGAGAGGGTGG...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCGGTCCCCGACGGGCCTaGCTCCAAGTCTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPGPRRA*LQVFVL
Trigger: GAGGACAAAGACTTGGAGCCAGGCCCGTCGGGGACC...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGGGTCTGCTCTACACCTaGTCCCAGTCCGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: APRQGQVVTGPACSATPRGLLYT*SQSGSC
Trigger: ACAGCTGCCGGACTGGGACCAGGTGTAGAGCAGACC...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGAACCCACCACCGAGATaGCTTGGCCCTGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: APRQGQVVTGPACSATPRNPPPR*LGPGLT
Trigger: TGTCAGCCCAGGGCCAAGCCATCTCGGTGGTGGGTT...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCAACCCACCACCGAGATaGCTTGGCCCTGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: EGEGEEEEGAPTPPGFSFNPPPR*LGPGLT
Trigger: TGTCAGCCCAGGGCCAAGCCATCTCGGTGGTGGGTT...GAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCATGACCTGGAAGCTCTaGGGCTTTGTGCGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: DGEGEGEEEEGAPTPPGFMTWKL*GFVRWQ
Trigger: CTGCCAGCGCACAAAGCCCCAGAGCTTCCAGGTCAT...GAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CCA 90 bp AGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCGTGAAGGAGCGGACATaGGCCAGCAGGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SPESSSMLMKMPGVSHSGVKERT*ASRGSR
Trigger: CCGGGAGCCCCTGCTGGCCCATGTCCGCTCCTTCAC...GCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CCA 90 bp GGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCTGTTCCTCCCTCCCGGAAATCCATaGCTTCCTCAGACGGGGGCG +
Preference number: 4 (lower is better)
Translates to: GGGRGGGSHSSRLQLLFLPPGNP*LPQTGA
Trigger: CGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGG...GAGGAACAGAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CCA 90 bp GGGCTCCAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGACGGGGCCTGTAACTTaGGGGAGACTGACATCTCCC +
Preference number: 4 (lower is better)
Translates to: GLQIILLQGPRRRLLGLWTGPVT*GRLTSP
Trigger: GGGAGATGTCAGTCTCCCCCAAGTTACAGGCCCCGT...CCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGTCTGTCTCTGGCTTATaGATATGTGCACGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: VRGSGGSAPPSRSARPLPSVSGL*ICARGL
Trigger: CAGGCCCCGTGCACATATCCATAAGCCAGAGACAGA...CGGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCCACTGCCGCTCGCCATaGCTGCTGTCAGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPHCRSP*LLSACP
Trigger: GGGACAAGCTGACAGCAGCCATGGCGAGCGGCAGTG...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGGGGTGTCCAGCTCCGTaGGACAGGATGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLGCPAP*DRMAPG
Trigger: GCCAGGAGCCATCCTGTCCCACGGAGCTGGACACCC...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCGCTGGGGACACCAGCTaGAGGGTTGTCTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPAGDTS*RVVWPA
Trigger: TGCAGGCCAGACAACCCTCCAGCTGGTGTCCCCAGC...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCTGTTCCTCGGATGCGGTCCAGGCTaGTATCATGCTCCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: GGGRGGGSHSSRLQLLFLGCGPG*YHAPGV
Trigger: GACGCCAGGAGCATGATATCAGCCTGGACCGCATCC...GAGGAACAGAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCGGCGGGCGATCTCGGCCTaGGGTGTGCCCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GQFSTSRSSSGEFMPIPRRAISA*GVPRST
Trigger: GGTGGACCTGGGCACACCTCAGGCCGAGATCGCCCG...CCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCTGTGATGTCCGTGTCTaGCTGGCCGGAGATCTGCGC +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPCDVRV*LAGDLR
Trigger: GCGCAGATCTCCGGCCAGTCAGACACGGACATCACA...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCCTGACAGGCGCCGCTTaGTCAGGACGCTCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPLTGAA*SGRSLS
Trigger: AGACAGAGAGCGTCCTGATCAAGCGGCGCCTGTCAG...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAGGCGGGACGGGCGCTTaGAGATCAGGTCTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPGGTGA*RSGLEV
Trigger: CACTTCGAGACCTGATCTTCAAGCGCCCGTCCCGCC...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCTCAGCACCGTCCGCTTaGTGTCGGCGATGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPSAPSA*CRRWLQ
Trigger: CTGAAGCCATCGCCGACATCAAGCGGACGGTGCTGA...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGGGATCGGCTGCTCAATaGCCCTCAGCACCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKGSAAQ*PSAPSA
Trigger: AGCGGACGGTGCTGAGGGTCATTGAGCAGCCGATCC...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGGCGGCAGCTGCAGGATaGCCTGGAAGCTCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: QPRVVIHADEDARGLALRAAAAG*PGSSGA
Trigger: AGCCCCAGAGCTTCCAGGTCATCCTGCAGCTGCCGC...CCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR GCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATGGCGTGGGTGCGGATaGCGTCATTGTCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGWRGCG*RHCQSP
Trigger: TGGACTCTGACAATGACGGCATCCGCACCCACGCCA...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGCTCCTGTGGCGTGGGTGCGGATaGCGTCATTGTCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: QIILLQGPRRRLLGLWLLWRGCG*RHCQSP
Trigger: TGGACTCTGACAATGACGGCATCCGCACCCACGCCA...CAGGAGCCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACGCACACTGCTCACCTaGGATTTGGCCAGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPRTLLT*DLASVG
Trigger: CCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCG...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CCTCCCGGAAATCCATGGCTTCCTCAGACGGGGGCGGGCCTGGCCGGGCCGACGGATTCTTACGCACACTaGTCACCTGCGATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PPGNPWLPQTGAGLAGPTDSYAH*SPAIWP
Trigger: TGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATC...CGTCGGCCCGGCCAGGCCCGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGTGCGGGTGTCCTTGCTaGTCGGCATGTTGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLCGCPC*SACCGR
Trigger: TCGCCCGCAACATGCCGAGCAGCAAGGACACCCGCA...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGGCTTGCGGGTGTCCTTaGTGCTCGGCATGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKACGCP*CSACCG
Trigger: CCCGCAACATGCCGAGCAGCAAGGACACCCGCAAGC...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGAGGCGTCAGCAGAGGCTaGAGGAACTCAGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGGVSRG*RNSAVM
Trigger: CATCACAGCTGAGTTCCTGCAGCCTCTGCTGACGCC...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGATGAGCCGAGCCAGGTaGTTGATCTGGGCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: APRQGQVVTGPACSATPRMSRAR*LIWASV
Trigger: CACGGAAGCCCAGATCAAGCACCTGGCTCGGCTCAT...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTGGCCTCCTCTTGGCCTaGGGTGCCTCTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVGLLLA*GASSSR
Trigger: CCTGGAGGAAGAGGCACCGCAGGCCAAGAGGAGGCC...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGAAGGTCGAGGAGGACATaGAGGTACTGGAACTGGCGG +
Preference number: 4 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGRSRRT*RYWNWR
Trigger: CCGCCAGTTCCAGTACCTGCATGTCCTCCTCGACCT...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCCTCCTCCGTCCAGGGTaGTGCCACCTCTGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPLLRPG*CHLCVL
Trigger: AAGGACACAGAGGTGGCAGCACCCTGGACGGAGGAG...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCGGGTACTTCCACACCTaGTTCATGATGAGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: DGEGEGEEEEGAPTPPGFGYFHT*FMMRRD
Trigger: GTCCCGCCTCATCATGAAGCAGGTGTGGAAGTACCC...GAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR GCA 90 bp CCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCTTGGCCTCTGGCTCCTaGTTGCCGCTGGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PESSSMLMKMPGVSHSGPLASGS*LPLASK
Trigger: CTTGGAGGCCAGCGGCAAGCAGGAGCCAGAGGCCAA...GGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR GCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCGCCGCTCGCCATGGCTaGTGTCAGCTTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVAARHG*CQLVPR
Trigger: CCTGGGGACAAGCTGACAGCAGCCATGGCGAGCGGC...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR GCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAGGTCTGCCCTGCTGCTaGGCCTCTACCACTCACGGT +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPGLPCC*ASTTHG
Trigger: ACCGTGAGTGGTAGAGGCGCAGCAGCAGGGCAGACC...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAGCAGGCAAGCTCTCCTaGCTCACCTACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPAGKLS*LTYPGP
Trigger: TGGGCCAGGGTAGGTGAGGCAGGAGAGCTTGCCTGC...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGGGTGGTCACTGGTCCTaGCTGCTCAGCCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQGGHWS*LLSHPK
Trigger: CTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACC...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GGGCTCCAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGAGCAGGGTGGTGATCTaGGCCTGGAACTCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: GLQIILLQGPRRRLLGLWSRVVI*AWNSKE
Trigger: TTCCTTGGAGTTCCAGGCCCAGATCACCACCCTGCT...CCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGACGTCCTCCCCCAGGTTaGGCTCCAGCTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGRPPPG*APASSS
Trigger: AGAAGATGAAGCTGGAGCCCAACCTGGGGGAGGACG...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTACCACCGAGATGGCTTaGCCCTGGGCTGACAGGCGC +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVTTEMA*PWADRR
Trigger: GCGCCTGTCAGCCCAGGGCCAAGCCATCTCGGTGGT...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAACAGGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGACCTTGTCCTTCTCATaGGAGCTGAGGTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QQVRGSGGSAPPSRSARPTLSFS*ELRSRR
Trigger: CCTCCTCGACCTCAGCTCCCATGAGAAGGACAAGGT...CGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACCTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCCCGCTTCACCAGCTCTaGGGAGGGTGGGACTTTGTC +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPPLHQL*GGWDFV
Trigger: GACAAAGTCCCACCCTCCCCAGAGCTGGTGAAGCGG...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGCTCCTGTGGGGCTTTGTGCGCTaGCAGCACTTGATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QIILLQGPRRRLLGLWLLWGFVR*QHLMKP
Trigger: GGGCTTCATCAAGTGCTGCCAGCGCACAAAGCCCCA...CAGGAGCCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CCA 90 bp CAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGACAGGTGCGAGGGTCTaGGGGCTCCGCTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QPRVVIHADEDARGLALRTGARV*GLRSSF
Trigger: GAAGGAGGAGCGGAGCCCCCAGACCCTCGCACCTGT...CCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAAGCTGGAGGGTTGTCTaGCCTGCAGCGTGCACGCCT +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPSWRVV*PAACTP
Trigger: AGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCT...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CAA 72 bp CGGATCGGCTGCTCAATGACCCTCAGCACCGTCCGCTaGATGTCGGCGATGGCTTCAGTGTACACGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RIGCSMTLSTVR*MSAMASVYTAA
Trigger: GGCGGCCGTGTACACTGAAGCCATCGCCGACATCAAGCGGACGGTGCTGAGGGTCATTGAGCAGCCGATCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCCCCGGCCCCTCCTCTTaGGTGAAAAACTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPPGPSS*VKNCDA
Trigger: GGCATCACAGTTTTTCACTCAAGAGGAGGGGCCGGG...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TCCTTGGGTAGGGGGCCCTCGAGACTAGAGTCCAACAGCGCGGCCTCGGTCAGCAGTCCAATAGCAGGATaGTGTCCCCCGCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: SLGRGPSRLESNSAASVSSPIAG*CPPPWQ
Trigger: CTGCCATGGCGGGGGACATCATCCTGCTATTGGACT...GCTGACCGAGGCCGCGCTGTTGGACTCTAGTCTCGAGGGCCCCCTACCCAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCGTCAGCCATGCGGGGTaGCAGGGTGACAATGAGGCC +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVVSHAG*QGDNEA
Trigger: GGCCTCATTGTCACCCTGTCACCCCGCATGGCTGAC...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GGAAGCGGACGTCTGGCAGTCGCTTGTGGTAGAGATCCCGGACCCGCTTCACCAGTCAGCCATGCGGGGTaGCAGGGTGACAATGAGGCC +
Preference number: 4 (lower is better)
Translates to: GSGRLAVACGRDPGPASPVSHAG*QGDNEA
Trigger: GGCCTCATTGTCACCCTGTCACCCCGCATGGCTGAC...TGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCAGACGTCCGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAGCGCTGTGGTCAGGTTaGTGGAGGAGATGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPALWSG*WRRWQG
Trigger: ACCCTGCCATCTCCTCCATCAACCTGACCACAGCGC...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGCCGGAGATCTGCGCTaGGGCCTTCGAGGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLAGDLR*GLRGPR
Trigger: TCGGGGACCTCGAAGGCCTCAGCGCAGATCTCCGGC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCATGTGATGTCCGTGTCTaGCTGGCCGGAGATCTGCGC +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPCDVRV*LAGDLR
Trigger: GCGCAGATCTCCGGCCAGTCAGACACGGACATCACA...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp AGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCGGCTTCCGTGCCTGCTaGCTCCACGGGGGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: SPESSSMLMKMPGVSHSGGFRAC*LHGGVD
Trigger: ATCTACACCCCCGTGGAGTCAGCAGGCACGGAAGCC...GCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp CCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCGCACATCCTCCAGGATaGAGGACAGGACCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: PESSSMLMKMPGVSHSGPAHPPG*RTGPPP
Trigger: AGGCGGAGGTCCTGTCCTTCATCCTGGAGGATGTGC...GGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GGTCAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCCACGGCCAGCACCTCTaGCGTGTACACGTTCCGCTC +
Preference number: 4 (lower is better)
Translates to: GQPRVVIHADEDARGLALHGQHL*RVHVPL
Trigger: GAGCGGAACGTGTACACGTCAGAGGTGCTGGCCGTG...GAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp TGTACACGGCCGCCAGTTCGTGGATCAGCTTGTGGTTCTGAGGCAGGAGGGCCAGCGGCAGCTGCAGGATaGCCTGGAAGCTCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: CTRPPVRGSACGSEAGGPAAAAG*PGSSGA
Trigger: AGCCCCAGAGCTTCCAGGTCATCCTGCAGCTGCCGC...TGGCCCTCCTGCCTCAGAACCACAAGCTGATCCACGAACTGGCGGCCGTGTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGAGTGGGGGCCATCGTaGGGCGGCCAGTTCGTCACC +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLEWGPS*GGQFVT
Trigger: GGTGACGAACTGGCCGCCTCACGATGGCCCCCACTC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAGCAGACAGTGGAGGTaGGGACCTGCCAGAAACCGA +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPSRQWR*GPARNR
Trigger: TCGGTTTCTGGCAGGTCCTCACCTCCACTGTCTGCT...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCTGGTCATGCCATCGATaGCCGGCCCCTCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: PESSSMLMKMPGVSHSGPWSCHR*PAPPLE
Trigger: CTCAAGAGGAGGGGCCGGGCATCGATGGCATGACCA...GGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp CTTGTCAGCTCCAAACAGCACAGACGGTGGGTTGGGGTGCACCAGGAGCTGCAGTCTCGGCCTGAGGTGTaGCCAGGTCCACCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LVSSKQHRRWVGVHQELQSRPEV*PGPPAG
Trigger: CCCTGCTGGTGGACCTGGGCACACCTCAGGCCGAGA...CTGCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGCTGTTTGGAGCTGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGTGCTGCTCGGCATGTTaGGGGCGATCTCGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMCCSAC*GRSRPE
Trigger: CTCAGGCCGAGATCGCCCGCAACATGCCGAGCAGCA...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGGCTTGCGGGTGTCCTTaGTGCTCGGCATGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMACGCP*CSACCG
Trigger: CCCGCAACATGCCGAGCAGCAAGGACACCCGCAAGC...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTGACTGGCCGGAGATCTaGGCTGAGGCCTTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVDWPEI*AEAFEV
Trigger: GACCTCGAAGGCCTCAGCGCAGATCTCCGGCCAGTC...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGCATCCTCGCAGTACTTaGGGACCACCTCCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKHPRST*GPPPGH
Trigger: GTGCCCTGGAGGTGGTCCGCAAGTACTGCGAGGATG...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CAACAGGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGACATGCCCAGATAGGTaGGACTCTCATCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: QQVRGSGGSAPPSRSARPTCPDR*DSHPRS
Trigger: ACTGCGAGGATGAGAGTCGCACCTATCTGGGCATGT...CGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACCTGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCGAGTTTCCCTCACCATaGTGGGTGCCCAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVEFPSP*WVPSRR
Trigger: CCGCCTGCTGGGCACCCAGCATGGTGAGGGAAACTC...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCTCCTCCCCTCTGGCTCCTGCTTaGCGCTGGCCTCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: SSSMLMKMPGVSHSGPSSPLAPA*RWPPRW
Trigger: CCATCTTGGAGGCCAGCGGCAAGCAGGAGCCAGAGG...GGAGGAGGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR GCA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGCTGGGTCTGCCCTGCTaGTGCGCCTCTACCACTCAC +
Preference number: 4 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMLGLPC*CASTTH
Trigger: GTGAGTGGTAGAGGCGCAGCAGCAGGGCAGACCCAG...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTGAGCCCAGCGCAGAGTaGTCAGTGAGTGGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVEPSAE*SVSGGH
Trigger: ATGGCCCCCACTCACTGAGCACTCTGCGCTGGGCTC...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGAGGGTTGTCTGGCCTaGAGCGTGCACGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLEGCLA*SVHAWA
Trigger: CGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTGGTGGTCACTGGTCCTaGCTGCTCAGCCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVGGHWS*LLSHPK
Trigger: CTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACC...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTGGTCCCCGACGGGCCTaGCTCCAAGTCTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVGPRRA*LQVFVL
Trigger: GAGGACAAAGACTTGGAGCCAGGCCCGTCGGGGACC...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGATCTTTATGCGGACCTaGGCTGCCCCGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: QPRVVIHADEDARGLALRIFMRT*AAPLQA
Trigger: GGCCTGCAGCGGGGCAGCCCAGGTCCGCATAAAGAT...CCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp CAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGAGGACATGCAGGTACTaGAACTGGCGGGACGGGCGC +
Preference number: 4 (lower is better)
Translates to: QPRVVIHADEDARGLALRRTCRY*NWRDGR
Trigger: GCGCCCGTCCCGCCAGTTCCAGTACCTGCATGTCCT...CCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAAACAGCACAGACGGTaGGTTGGGGTGCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPKQHRR*VGVHQE
Trigger: CTCCTGGTGCACCCCAACCCACCGTCTGTGCTGTTT...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCCAGCTCTGGGGAGGGTaGGACTTTGTCTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPQLWGG*DFVCEA
Trigger: AGCCTCACAGACAAAGTCCCACCCTCCCCAGAGCTG...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp AGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCGGGCTCCCGGAGCTCTaGGCACTTGTCAAAGACGGC +
Preference number: 4 (lower is better)
Translates to: SPESSSMLMKMPGVSHSGGLPEL*ALVKDG
Trigger: GCCGTCTTTGACAAGTGCCCAGAGCTCCGGGAGCCC...GCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CCA 90 bp GCCTGGGAGCGCACCTTGTCCTTCTCATGGGAGCTGAGGTCGAGGAGGACATGCGTCAGCTGTTCCCCTTaGCCTCGGGTTCCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: AWERTLSFSWELRSRRTCVSCSP*PRVPWR
Trigger: ACGCCAGGGAACCCGAGGCCAAGGGGAACAGCTGAC...GCATGTCCTCCTCGACCTCAGCTCCCATGAGAAGGACAAGGTGCGCTCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCCTCTGTCACCCAGGTTaGAGTGTGGTGGTGCGATCT +
Preference number: 4 (lower is better)
Translates to: EGEGEEEEGAPTPPGFSFLCHPG*SVVVRS
Trigger: AGATCGCACCACCACACTCCAACCTGGGTGACAGAG...GAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGCAGGGAACCAGCGGATaGGCTGGGCTGGATTGTCAC +
Preference number: 4 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLQGTSG*AGLDCH
Trigger: GTGACAATCCAGCCCAGCCCATCCGCTGGTTCCCTG...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCCTGCCTCACCTACCCTaGCCCACAAGTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVLPHLP*PTSALE
Trigger: CTCCAGGGCACTTGTGGGCCAGGGTAGGTGAGGCAG...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTCGCTCTCAGGGGAGGTaGTCCTTAGACGCGGAACCG +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVRSQGR*SLDAEP
Trigger: CGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGGGGCACCTTTCCCAATaGCGACAGCCTGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLGHLSQ*RQPDLL
Trigger: GAGGAGGTCAGGCTGTCGCCATTGGGAAAGGTGCCC...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCGGATGCGGTCCAGGCTaGTATCATGCTCCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVGCGPG*YHAPGV
Trigger: GACGCCAGGAGCATGATATCAGCCTGGACCGCATCC...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTGCACATCCTCCAGGATaGAGGACAGGACCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVAHPPG*RTGPPP
Trigger: AGGCGGAGGTCCTGTCCTTCATCCTGGAGGATGTGC...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGCAGACAACAGGCGGATaGGGCAGTCCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: APRQGQVVTGPACSATPRQTTGG*GSPHTC
Trigger: ACAAGTATGAGGACTGCCTCATCCGCCTGTTGTCTG...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCTCAGCACCGTCCGCTTaGTGTCGGCGATGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVSAPSA*CRRWLQ
Trigger: CTGAAGCCATCGCCGACATCAAGCGGACGGTGCTGA...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCGTGGGACTTTGTCTGTaGGGCTGTGCAGACATCTCG +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPVGLCL*GCADIS
Trigger: CGAGATGTCTGCACAGCCTCACAGACAAAGTCCCAC...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAGGTGGGGCTGTGAGTaGCAGTCTTTGACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPRWGCE*QSLTWQ
Trigger: CTGCCAAGTCAAAGACTGTCACTCACAGCCCCACCT...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGCGCAGAGTGCTCAGTaGGTGGGGGCCATCGTGAGG +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLAQSAQ*VGAIVR
Trigger: CCTCACGATGGCCCCCACTCACTGAGCACTCTGCGC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGTATAGAGGGCGACAGTaGGGGTGTCCAGCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMYRGRQ*GCPAPW
Trigger: CCACGGAGCTGGACACCCTCACTGTCGCCCTCTATA...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACACAGCCCTGGCCTATaGGCCTGGAGATCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPHSPGL*AWRSFL
Trigger: GAGGAAAGATCTCCAGGCTCATAGGCCAGGGCTGTG...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCTCGGGAAGTCTTCCCTaGTGTCCCACACCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVSGSLP*CPTPRL
Trigger: CAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGA...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTTCGGGAAGTCTTCCCTaGTGTCCCACACCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVSGSLP*CPTPRL
Trigger: CAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGA...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCTCTCTGAGGTGGTCATaGCATCGATGCCCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVSLRWS*HRCPAP
Trigger: AGGGGCCGGGCATCGATGGCATGACCACCTCAGAGA...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCTCCAAGGAAGCCGGGTaGTTCAGCACACTCAACAGG +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPSKEAG*FSTLNR
Trigger: CCTGTTGAGTGTGCTGAAGCACCCGGCTTCCTTGGA...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CTTGTCAGCTCCAAACAGCACAGACGGTGGGTTGGGGTGCACCAGGAGCTGCAGGCTTGCGGGTGTCCTTaGTGCTCGGCATGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: LVSSKQHRRWVGVHQELQACGCP*CSACCG
Trigger: CCCGCAACATGCCGAGCAGCAAGGACACCCGCAAGC...CTGCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGCTGTTTGGAGCTGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAATATGCGGACCTGGGCTaGCCCGCTGCAGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQYADLG*PAAGHS
Trigger: GCTGTGGCCTGCAGCGGGGCAGCCCAGGTCCGCATA...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp ATCAGCTGCTGCATCACCACGGCCAGCACCTCTGACGTGTACACGTTCCGCTCCTGGCCAGGATCTTTATaGGGACCTGGGCTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: ISCCITTASTSDVYTFRSWPGSL*GPGLPR
Trigger: GCGGGGCAGCCCAGGTCCGCATAAAGATCCTGGCCA...GGAGCGGAACGTGTACACGTCAGAGGTGCTGGCCGTGGTGATGCAGCAGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GGAAGCGGACGTCTGGCAGTCGCTTGTGGTAGAGATCCCGGACCCGCTTCACCACTCCTCCGTCCAGGGTaGTGCCACCTCTGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GSGRLAVACGRDPGPASPLLRPG*CHLCVL
Trigger: AAGGACACAGAGGTGGCAGCACCCTGGACGGAGGAG...TGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCAGACGTCCGCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCATTCCTCGGATCGGCTaGTCAATGACCCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPIPRIG*SMTLST
Trigger: GGTGCTGAGGGTCATTGAGCAGCCGATCCGAGGAAT...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GACCTGGAAGCTCTGGGGCTTTGTGCGCTGGCAGCACTTGATGAAGCCCTCCCATGCTGGGGCGGCAGCTaGAGGATGACCTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: DLEALGLCALAALDEALPCWGGS*RMTWKL
Trigger: GAGCTTCCAGGTCATCCTGCAGCTGCCGCCCCAGCA...TGGGAGGGCTTCATCAAGTGCTGCCAGCGCACAAAGCCCCAGAGCTTCCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp CTTGTCAGCTCCAAACAGCACAGACGGTGGGTTGGGGTGCACCAGGAGCTGCAGTTGGCCTCTGGCTCCTaGTTGCCGCTGGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LVSSKQHRRWVGVHQELQLASGS*LPLASK
Trigger: CTTGGAGGCCAGCGGCAAGCAGGAGCCAGAGGCCAA...CTGCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGCTGTTTGGAGCTGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GGAAGCGGACGTCTGGCAGTCGCTTGTGGTAGAGATCCCGGACCCGCTTCACCAATCTTCTCCAACAGGTaGGAGGGTCTGGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GSGRLAVACGRDPGPASPIFSNR*EGLGAP
Trigger: CGGAGCCCCCAGACCCTCGCACCTGTTGGAGAAGAT...TGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCAGACGTCCGCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCGGGCCGCTCGCCATGGCTaGTGTCAGCTTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GQFSTSRSSSGEFMPIPRAARHG*CQLVPR
Trigger: CCTGGGGACAAGCTGACAGCAGCCATGGCGAGCGGC...CCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGCCCTGGGTCTGCCCTaGTGCTGCGCCTCTACCACT +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLALGLP*CCASTT
Trigger: AGTGGTAGAGGCGCAGCAGCAGGGCAGACCCAGGGC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCCTGGCCCAGAAACCTTaGTCAGGAGGGATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVLAQKP*SGGMEG
Trigger: CCCCTCCATCCCTCCTGAGCAAGGTTTCTGGGCCAG...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCACCTCCCTCGGTCCCTaGAGTCTCCTGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLTSLGP*SLLLLP
Trigger: CGGCAGCAGCAGGAGACTGCAGGGACCGAGGGAGGT...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGGTGGAGGTGAGGACCTaGCAGAAACCGAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMVEVRT*QKPRKP
Trigger: GGGCTTCCTCGGTTTCTGGCAGGTCCTCACCTCCAC...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCCACTGCCGCTCGCCATaGCTGCTGTCAGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLHCRSP*LLSAQL
Trigger: GAGCTGCGCTGACAGCAGCCATGGCGAGCGGCAGTG...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599460.5
CDS-3UTR CCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGCGTCCTCCCCCAGGTTaGGCTCCAGCTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKRPPPG*APASSS
Trigger: AGAAGATGAAGCTGGAGCCCAACCTGGGGGAGGACG...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GACCTGGAAGCTCTGGGGCTTTGTGCGCTGGCAGCACTTGATGAAGCCCTCCCACCACGGGGGTGTAGATaGCCTGGAAGGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: DLEALGLCALAALDEALPPRGCR*PGRRLA
Trigger: TGCCAGCCTCCTTCCAGGCCATCTACACCCCCGTGG...TGGGAGGGCTTCATCAAGTGCTGCCAGCGCACAAAGCCCCAGAGCTTCCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCGCCAGGTGCTTGATCTaGGCTTCCGTGCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVARCLI*ASVPAD
Trigger: GTCAGCAGGCACGGAAGCCCAGATCAAGCACCTGGC...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCCTGGGAGCGCACCTTGTCCTTCTCATGGGAGCTGAGGTCGAGGAGGACATGCGGTCTGCTCTACACCTaGTCCCAGTCCGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: AWERTLSFSWELRSRRTCGLLYT*SQSGSC
Trigger: ACAGCTGCCGGACTGGGACCAGGTGTAGAGCAGACC...GCATGTCCTCCTCGACCTCAGCTCCCATGAGAAGGACAAGGTGCGCTCCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGAGATGGCTTGGCCCTaGGCTGACAGGCGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLEMAWP*ADRRRL
Trigger: CAAGCGGCGCCTGTCAGCCCAGGGCCAAGCCATCTC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGAGGGATAATGGGCTCTaGCCTCCTCTTGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMRDNGL*PPLGLR
Trigger: CCGCAGGCCAAGAGGAGGCCAGAGCCCATTATCCCT...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGACTGTGTCACCAGGCTaGCCAGGATCTTTATGCGGA +
Preference number: 4 (lower is better)
Translates to: APRQGQVVTGPACSATPRTVSPG*PGSLCG
Trigger: TCCGCATAAAGATCCTGGCCAGCCTGGTGACACAGT...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCTCAGGTCTCGAAGTGTaGACATGCCCAGATAGGTGC +
Preference number: 4 (lower is better)
Translates to: EGEGEEEEGAPTPPGFSFSGLEV*TCPDRC
Trigger: GCACCTATCTGGGCATGTCCACACTTCGAGACCTGA...GAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCTTGTCCTTCTCATaGGAGCTGAGGTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPTLSFS*ELRSRR
Trigger: CCTCCTCGACCTCAGCTCCCATGAGAAGGACAAGGT...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGAAACAGCACAGACGGTaGGTTGGGGTGCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLKQHRR*VGVHQE
Trigger: CTCCTGGTGCACCCCAACCCACCGTCTGTGCTGTTT...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCGTGTCTCTGCTCCCTTaGGACAATTTTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: DGEGEGEEEEGAPTPPGFVSLLP*DNFPPA
Trigger: TGCTGGTGGAAAATTGTCCCAAGGGAGCAGAGACAC...GAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GGAAGCGGACGTCTGGCAGTCGCTTGTGGTAGAGATCCCGGACCCGCTTCACCACCGCTTCACCAGCTCTaGGGAGGGTGGGACTTTGTC +
Preference number: 4 (lower is better)
Translates to: GSGRLAVACGRDPGPASPPLHQL*GGWDFV
Trigger: GACAAAGTCCCACCCTCCCCAGAGCTGGTGAAGCGG...TGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCAGACGTCCGCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGGAGGAAGCGGACGTCTaGCAGTCGCTTGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLEEADV*QSLVVE
Trigger: CTCTACCACAAGCGACTGCCAGACGTCCGCTTCCTC...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCTGGGGCTTTGTGCGCTaGCAGCACTTGATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PESSSMLMKMPGVSHSGPWGFVR*QHLMKP
Trigger: GGGCTTCATCAAGTGCTGCCAGCGCACAAAGCCCCA...GGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CCA 90 bp GGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCTGTTCCTCAGCTGCAGGATGACCTaGAAGCTCTGGGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: GGGRGGGSHSSRLQLLFLSCRMT*KLWGFV
Trigger: CACAAAGCCCCAGAGCTTCCAGGTCATCCTGCAGCT...GAGGAACAGAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CCA 90 bp CCCATTCCTCGGATCGGCTGCTCAATGACCCTCAGCACCGTCCGCTTGATGTCGCCTCCCGGAAATCCATaGCTTCCTCAGACGGGGGCG +
Preference number: 4 (lower is better)
Translates to: PIPRIGCSMTLSTVRLMSPPGNP*LPQTGA
Trigger: CGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGG...CGACATCAAGCGGACGGTGCTGAGGGTCATTGAGCAGCCGATCCGAGGAATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGACGGGGCCTGTAACTTaGGGGAGACTGACATCTCCC +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKTGPVT*GRLTSP
Trigger: GGGAGATGTCAGTCTCCCCCAAGTTACAGGCCCCGT...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CCA 90 bp CAACAGGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGTCCAGGGTCTGTCTCTaGCTTATGGATATGTGCACG +
Preference number: 4 (lower is better)
Translates to: QQVRGSGGSAPPSRSARPSRVCL*LMDMCT
Trigger: CGTGCACATATCCATAAGCCAGAGACAGACCCTGGA...CGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACCTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GGAAGCGGACGTCTGGCAGTCGCTTGTGGTAGAGATCCCGGACCCGCTTCACCACAGGGAACCAGCGGATaGGCTGGGCTGGATTGTCAC +
Preference number: 4 (lower is better)
Translates to: GSGRLAVACGRDPGPASPQGTSG*AGLDCH
Trigger: GTGACAATCCAGCCCAGCCCATCCGCTGGTTCCCTG...TGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCAGACGTCCGCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCGGCCCACAAGTGCCCTaGAGCCCTGGGTCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGGPQVP*SPGSAL
Trigger: CAGGGCAGACCCAGGGCTCCAGGGCACTTGTGGGCC...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCGGAGGGATGGAGGGGTaGGCGCTCTCAGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGGGMEG*ALSGEV
Trigger: CACCTCCCCTGAGAGCGCCCACCCCTCCATCCCTCC...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGGGACAGGATGGCTCCTaGCCCAGAAACCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQGQDGS*PRNLAQ
Trigger: CTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCC...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGCAAGGCCCTTTCTCCTaGGCCAAGGATCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKQGPFS*AKDLQG
Trigger: CCCCTGAAGATCCTTGGCCCAGGAGAAAGGGCCTTG...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACAAGGCCCTTTCTCCTaGGCCAAGGATCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPQGPFS*AKDLQG
Trigger: CCCCTGAAGATCCTTGGCCCAGGAGAAAGGGCCTTG...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTAGTCCAATAGCAGGATaGTGTCCCCCGCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVSPIAG*CPPPWQ
Trigger: CTGCCATGGCGGGGGACATCATCCTGCTATTGGACT...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGCTCCTGGGAGCTGCAGGTAGTTaGGGGCAAATTTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: QIILLQGPRRRLLGLWLLGAAGS*GQISPH
Trigger: ATGTGGAGAAATTTGCCCTCAACTACCTGCAGCTCC...CAGGAGCCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCACAAACAGCTGCTaGACGATGGGCCACATGAAC +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPTTNSC*TMGHMN
Trigger: GTTCATGTGGCCCATCGTTCAGCAGCTGTTTGTGGT...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR TCA 90 bp GAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCTCCCCAGCACAACCTTGGTaGAGATCCTGCGGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: ESSSMLMKMPGVSHSGPSPAQPW*RSCGQV
Trigger: TACCTGGCCGCAGGATCTTCACCAAGGTTGTGCTGG...GGAGGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCAGGGGTCGGGGAATGTaGAGACCACAGCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLRGRGM*RPQPWP
Trigger: AGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCT...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCATGAACTTAAGCAGCTaGTCCAAGGCTGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPMNLSS*SKAALP
Trigger: GGGCAAGGCAGCCTTGGAGCAGCTGCTTAAGTTCAT...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCGGGACTGGCCGGAGATCTaGGCTGAGGCCTTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: GQFSTSRSSSGEFMPIPRDWPEI*AEAFEV
Trigger: GACCTCGAAGGCCTCAGCGCAGATCTCCGGCCAGTC...CCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp CTCCTGCTTGCCGCTGGCCTCCAAGATGGTCATGATGGAGTTAGGGATGTGAGCGGCCTCCTCTTGGCCTaGGGTGCCTCTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLLAAGLQDGHDGVRDVSGLLLA*GASSSR
Trigger: CCTGGAGGAAGAGGCACCGCAGGCCAAGAGGAGGCC...GCTCACATCCCTAACTCCATCATGACCATCTTGGAGGCCAGCGGCAAGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCTGGCTTATGGATATGTaGACGGGGCCTGTAACTTGG +
Preference number: 4 (lower is better)
Translates to: EGEGEEEEGAPTPPGFSFWLMDM*TGPVTW
Trigger: CCAAGTTACAGGCCCCGTGCACATATCCATAAGCCA...GAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGACTCACGGTGTGCCCTaGTTCCTTCTGTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMTHGVP*FLLFLG
Trigger: CCCGAGGAACAGAAGGAAGCAGGGCACACCGTGAGT...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGCTACCACTCACGGTGTaGCCTGCTTCCTTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKLPLTV*PASFCS
Trigger: GGAACAGAAGGAAGCAGGGCACACCGTGAGTGGTAG...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGCTACCACTCACGGTGTaGCCTGCTTCCTTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQLPLTV*PASFCS
Trigger: GGAACAGAAGGAAGCAGGGCACACCGTGAGTGGTAG...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCCCAACCCTGCCGCCCTaGAGGCAAGCTCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGPTLPP*RQALLP
Trigger: AGGCAGGAGAGCTTGCCTGCAGGGCGGCAGGGTTGG...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGTTCGTCACCAACCCTaGCGCCCTGCAGGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLVRHQP*RPAGKL
Trigger: GAGCTTGCCTGCAGGGCGGCAGGGTTGGTGACGAAC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGGAGATCTTTCCTCCCTaGTGGTCTCCCACGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMEIFPP*WSPTRG
Trigger: GCCTCTCGTGGGAGACCAGCAGGGAGGAAAGATCTC...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCATGCAACCAGGAAGACTaGTGGTGCCTGAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPCNQED*WCLSRR
Trigger: TCTCCTGCTCAGGCACCAGCAGTCTTCCTGGTTGCA...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGTACACGGCCGCCAGTTCGTGGATCAGCTTGTGGTTCTGAGGCAGGAGGGCCACCACCCTCTCTGAGGTaGTCATGCCATCGATGCCCG +
Preference number: 4 (lower is better)
Translates to: CTRPPVRGSACGSEAGGPPPSLR*SCHRCP
Trigger: CGGGCATCGATGGCATGACCACCTCAGAGAGGGTGG...TGGCCCTCCTGCCTCAGAACCACAAGCTGATCCACGAACTGGCGGCCGTGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTATGTCCGTGTCTGACTaGCCGGAGATCTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVMSVSD*PEICAE
Trigger: CTCAGCGCAGATCTCCGGCCAGTCAGACACGGACAT...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGTCTCTGCTCCCTTGGGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTGAGATGGCTTGGCCCTaGGCTGACAGGCGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: CLCSLGTIFHQQEQLRGVEMAWP*ADRRRL
Trigger: CAAGCGGCGCCTGTCAGCCCAGGGCCAAGCCATCTC...AACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCCCAAGGGAGCAGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGACCTTGTCCTTCTCATaGGAGCTGAGGTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQTLSFS*ELRSRR
Trigger: CCTCCTCGACCTCAGCTCCCATGAGAAGGACAAGGT...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCATGAACAGCAGGGCCTaGGAGCGCACCTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVMNSRA*ERTLSF
Trigger: GAAGGACAAGGTGCGCTCCCAGGCCCTGCTGTTCAT...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCCAGCTCTGGGGAGGGTaGGACTTTGTCTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVQLWGG*DFVCEA
Trigger: AGCCTCACAGACAAAGTCCCACCCTCCCCAGAGCTG...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGAGTTTAGGCAGGGCCTaGATCACCTCTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: APRQGQVVTGPACSATPRSLGRA*ITSFFS
Trigger: GGAGAAGAAAGAGGTGATCCAGGCCCTGCCTAAACT...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGAGCCCTCCCACACCTTaGGGTACTTCCACACCTGCT +
Preference number: 4 (lower is better)
Translates to: QPRVVIHADEDARGLALRSPPTP*GTSTPA
Trigger: AGCAGGTGTGGAAGTACCCCAAGGTGTGGGAGGGCT...CCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGCTCTGTCACCCAGGTTaGAGTGTGGTGGTGCGATCT +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKLCHPG*SVVVRS
Trigger: AGATCGCACCACCACACTCCAACCTGGGTGACAGAG...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCCTTGCTCAGGAGGGATaGAGGGGTGGGCGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLLAQEG*RGGRSQ
Trigger: CTGAGAGCGCCCACCCCTCCATCCCTCCTGAGCAAG...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCATTGAGTGAAAAACTGTaGTGCCACGCTCCGACGGGT +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPLSEKL*CHAPTG
Trigger: ACCCGTCGGAGCGTGGCATCACAGTTTTTCACTCAA...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTGCCCCTCCTCTTGAGTaGAAAACTGTGATGCCACGC +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVAPPLE*KTVMPR
Trigger: GCGTGGCATCACAGTTTTTCACTCAAGAGGAGGGGC...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGGCCCCTCCTCTTGAGTaGAAAACTGTGATGCCACGC +
Preference number: 4 (lower is better)
Translates to: QPRVVIHADEDARGLALRAPPLE*KTVMPR
Trigger: GCGTGGCATCACAGTTTTTCACTCAAGAGGAGGGGC...CCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp TGTACACGGCCGCCAGTTCGTGGATCAGCTTGTGGTTCTGAGGCAGGAGGGCCACCCGGCCCCTCCTCTTaGGTGAAAAACTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: CTRPPVRGSACGSEAGGPPGPSS*VKNCDA
Trigger: GGCATCACAGTTTTTCACTCAAGAGGAGGGGCCGGG...TGGCCCTCCTGCCTCAGAACCACAAGCTGATCCACGAACTGGCGGCCGTGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTATCCACCACCCTCTCTaGGGTGGTCATGCCATCGAT +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVIHHPL*GGHAID
Trigger: ATCGATGGCATGACCACCTCAGAGAGGGTGGTGGAT...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCTCCTCCATCCACCACCCTCTCTaGGGTGGTCATGCCATCGAT +
Preference number: 4 (lower is better)
Translates to: SSSMLMKMPGVSHSGPSSIHHPL*GGHAID
Trigger: ATCGATGGCATGACCACCTCAGAGAGGGTGGTGGAT...GGAGGAGGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGCTCGCTAATGACCCGTaGCTTTACCATCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLLANDP*LYHPLQ
Trigger: CTGCAGTGGATGGTAAAGTCACGGGTCATTAGCGAG...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAGTCAGCCATGCGGGGTaGCAGGGTGACAATGAGGCC +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQVSHAG*QGDNEA
Trigger: GGCCTCATTGTCACCCTGTCACCCCGCATGGCTGAC...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCGGGCGCTGTGGTCAGGTTaGTGGAGGAGATGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GQFSTSRSSSGEFMPIPRALWSG*WRRWQG
Trigger: ACCCTGCCATCTCCTCCATCAACCTGACCACAGCGC...CCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCTGTTCCTCGCTTCAGCACGTCGCTaGGACGGAAAATTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GGGRGGGSHSSRLQLLFLASARR*DGKFSC
Trigger: GCAAGAAAATTTTCCGTCTCAGCGACGTGCTGAAGC...GAGGAACAGAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGCAGACAACAGGCGGATaGGGCAGTCCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQQTTGG*GSPHTC
Trigger: ACAAGTATGAGGACTGCCTCATCCGCCTGTTGTCTG...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGCCAGCACAACCTTGGTaGAGATCCCATCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQPAQPW*RSHPSG
Trigger: ACCAGAAGGATGGGATCTTCACCAAGGTTGTGCTGG...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCGGTCAGCACCGTCCGCTTaGTGTCGGCGATGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GQFSTSRSSSGEFMPIPRSAPSA*CRRWLQ
Trigger: CTGAAGCCATCGCCGACATCAAGCGGACGGTGCTGA...CCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCCAGCGGGGACAAGGCTaGGTTTCCCTCACCATGCTG +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLQRGQG*VSLTML
Trigger: CAGCATGGTGAGGGAAACTCAGCCTTGTCCCCGCTG...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCTGGTGTCAAACTCCTaGCCTCAGGTGTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: QPRVVIHADEDARGLALRLVSNS*PQVFHL
Trigger: CAGGTGGAACACCTGAGGTCAGGAGTTTGACACCAG...CCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCTCCATGGAGTTAGGGATGTaGGCTTGCTGGGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ESSSMLMKMPGVSHSGPSMELGM*ACWVES
Trigger: GCTCTCCACCCAGCAAGCTCACATCCCTAACTCCAT...GGAGGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596824.1
CDS-3UTR TCA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGAGGTGGGGCTGTGAGTaGCAGTCTTTGACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMRWGCE*QSLTWQ
Trigger: CTGCCAAGTCAAAGACTGTCACTCACAGCCCCACCT...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAGGGGTCGGGGAATGTaGAGACCACAGCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQRGRGM*RPQPWP
Trigger: AGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCT...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAAAGACTGCTGGTGCCTaGGCAGGAGAAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPKTAGA*AGEKLG
Trigger: CCCAAGTTTTTCTCCTGCTCAGGCACCAGCAGTCTT...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGTACACGGCCGCCAGTTCGTGGATCAGCTTGTGGTTCTGAGGCAGGAGGGCCAGCTCCAAGGCTGCCTTaGCCTCTTCCCATAGCACGT +
Preference number: 4 (lower is better)
Translates to: CTRPPVRGSACGSEAGGPAPRLP*PLPIAR
Trigger: ACGTGCTATGGGAAGAGGGCAAGGCAGCCTTGGAGC...TGGCCCTCCTGCCTCAGAACCACAAGCTGATCCACGAACTGGCGGCCGTGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGTGCGGGTGTCCTTGCTaGTCGGCATGTTGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: DRARAVFPVSPALPRMDMCGCPC*SACCGR
Trigger: TCGCCCGCAACATGCCGAGCAGCAAGGACACCCGCA...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GTCCAACAGCGCGGCCTCGGTCAGCCCCGAGTCGTCATCCATGCTGATGAAGATGGCGTCAGCAGAGGCTaGAGGAACTCAGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: VQQRGLGQPRVVIHADEDGVSRG*RNSAVM
Trigger: CATCACAGCTGAGTTCCTGCAGCCTCTGCTGACGCC...ATCTTCATCAGCATGGATGACGACTCGGGGCTGACCGAGGCCGCGCTGTTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCTTGCACTGTTTGGTCTaGTCTACACCTGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPLHCLV*STPGPS
Trigger: ACTGGGACCAGGTGTAGAGCAGACCAAACAGTGCAA...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATTATGCGGACCTGGGCTaGCCCGCTGCAGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNYADLG*PAAGHS
Trigger: GCTGTGGCCTGCAGCGGGGCAGCCCAGGTCCGCATA...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGTGGCCAGGATCTTTATaGGGACCTGGGCTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: DRARAVFPVSPALPRMDMWPGSL*GPGLPR
Trigger: GCGGGGCAGCCCAGGTCCGCATAAAGATCCTGGCCA...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAACATGCCCAGATAGGTaGGACTCTCATCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPTCPDR*DSHPRS
Trigger: ACTGCGAGGATGAGAGTCGCACCTATCTGGGCATGT...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGCTCGAAGTGTGGACATaGCCAGATAGGTGCGACTCT +
Preference number: 4 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQLEVWT*PDRCDS
Trigger: AGAGTCGCACCTATCTGGGCATGTCCACACTTCGAG...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GTGTCCTTGTCAGCTCCAAACAGCACAGACGGTGGGTTGGGGTGCACCAGGAGCAGGTCGAGGAGGACATaGAGGTACTGGAACTGGCGG +
Preference number: 4 (lower is better)
Translates to: VSLSAPNSTDGGLGCTRSRSRRT*RYWNWR
Trigger: CCGCCAGTTCCAGTACCTGCATGTCCTCCTCGACCT...GCTCCTGGTGCACCCCAACCCACCGTCTGTGCTGTTTGGAGCTGACAAGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GGTCAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCTGTTCCTCCTCCAGCTaGCGCTTTAAGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GQPRVVIHADEDARGLALCSSSS*RFKAFS
Trigger: GGAGAAGGCCTTAAAGCGGCAGCTGGAGGAGGAACA...GAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR GCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGCTGGGTCTGCCCTGCTaGTGCGCCTCTACCACTCAC +
Preference number: 4 (lower is better)
Translates to: DRARAVFPVSPALPRMDMLGLPC*CASTTH
Trigger: GTGAGTGGTAGAGGCGCAGCAGCAGGGCAGACCCAG...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCCTGGAGCCCTGGGTCTaGCCTGCTGCTGCGCCTCTA +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLLEPWV*PAAAPL
Trigger: TAGAGGCGCAGCAGCAGGGCAGACCCAGGGCTCCAG...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGTCCCTGCAGTCTCCTaGTGCTGCCGCCTACTCATC +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLVPAVS*CCRLLI
Trigger: GATGAGTAGGCGGCAGCAGCAGGAGACTGCAGGGAC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCTTGATGATCAGCTCCTaGACCTGTTTGAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: EGEGEEEEGAPTPPGFSFLMISS*TCLSTV
Trigger: CACAGTGCTCAAACAGGTCCAGGAGCTGATCATCAA...GAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACTGATATCATGCTCCTaGCGTCGGGGTATCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPLISCS*RRGISE
Trigger: CTCAGAGATACCCCGACGCCAGGAGCATGATATCAG...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAATCTGGCGGGCGATATTaGCAAGGGAGCCCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQSGGRY*QGSPAL
Trigger: CAGCGCTGGGCTCCCTTGCCAATATCGCCCGCCAGA...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAATGAACATGGGTCTCTaGCGGGCGATATTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPMNMGL*RAILAR
Trigger: CCTTGCCAATATCGCCCGCCAGAGACCCATGTTCAT...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAATGCTCACCTGCGATTTaGCCAGCGTCGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQCSPAI*PASGAG
Trigger: ACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCA...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGTACACGGCCGCCAGTTCGTGGATCAGCTTGTGGTTCTGAGGCAGGAGGGCCACGTCCTCCCCCAGGTTaGGCTCCAGCTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: CTRPPVRGSACGSEAGGPRPPPG*APASSS
Trigger: AGAAGATGAAGCTGGAGCCCAACCTGGGGGAGGACG...TGGCCCTCCTGCCTCAGAACCACAAGCTGATCCACGAACTGGCGGCCGTGTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATACCACCGAGATGGCTTaGCCCTGGGCTGACAGGCGC +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYTTEMA*PWADRR
Trigger: GCGCCTGTCAGCCCAGGGCCAAGCCATCTCGGTGGT...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCAGGGATAATGGGCTCTaGCCTCCTCTTGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLRDNGL*PPLGLR
Trigger: CCGCAGGCCAAGAGGAGGCCAGAGCCCATTATCCCT...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GGAAGCGGACGTCTGGCAGTCGCTTGTGGTAGAGATCCCGGACCCGCTTCACCATTCATGGCTTCCACCTaGGCATCGGTAAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GSGRLAVACGRDPGPASPFMAST*ASVRGF
Trigger: GAAGCCCCTTACCGATGCCCAGGTGGAAGCCATGAA...TGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCAGACGTCCGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGGCACAGACGGTGGGTTaGGGTGCACCAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DRARAVFPVSPALPRMDMAQTVG*GAPGAA
Trigger: TGCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGC...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCGCACAGACGGTGGGTTaGGGTGCACCAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGAQTVG*GAPGAA
Trigger: TGCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGC...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCTGTTCCTCAGTTTAGGCAGGGCCTaGATCACCTCTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGGRGGGSHSSRLQLLFLSLGRA*ITSFFS
Trigger: GGAGAAGAAAGAGGTGATCCAGGCCCTGCCTAAACT...GAGGAACAGAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCGGGCGGATGGGCTGGGCTaGATTGTCACCCGAACACCT +
Preference number: 4 (lower is better)
Translates to: GQFSTSRSSSGEFMPIPRADGLG*IVTRTP
Trigger: AGGTGTTCGGGTGACAATCCAGCCCAGCCCATCCGC...CCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATGGGTGTCCAGCTCCGTaGGACAGGATGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYGCPAP*DRMAPG
Trigger: GCCAGGAGCCATCCTGTCCCACGGAGCTGGACACCC...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAGAGAAAAACTTGGGTTaGGTGCTGGGGACACCAGCT +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPEKNLG*VLGTPA
Trigger: AGCTGGTGTCCCCAGCACCCAACCCAAGTTTTTCTC...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGCTCGACTTTGTGATCTaGAGCTTAGAGTGCAACCAG +
Preference number: 4 (lower is better)
Translates to: APRQGQVVTGPACSATPRLDFVI*SLECNQ
Trigger: CTGGTTGCACTCTAAGCTCCAGATCACAAAGTCGAG...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGCTTCTTGTCTCTCCCTaGACTGTAAGCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQLLVSP*TVSPGR
Trigger: CCTTCCAGGGCTTACAGTCCAGGGAGAGACAAGAAG...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGGGGAGGAGGCTGAATaGGCAGAGCAGACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLGEEAE*AEQTVE
Trigger: CTCCACTGTCTGCTCTGCCCATTCAGCCTCCTCCCC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CAA 72 bp ACCTGGAAGCTCTGGGGCTTTGTGCGCTGGCAGCACTaGATGAAGCCCTCCCACACCTTGGGGTACTTCCAC +
Preference number: 4 (lower is better)
Translates to: TWKLWGFVRWQH*MKPSHTLGYFH
Trigger: GTGGAAGTACCCCAAGGTGTGGGAGGGCTTCATCAAGTGCTGCCAGCGCACAAAGCCCCAGAGCTTCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GGAAGCGGACGTCTGGCAGTCGCTTGTGGTAGAGATCCCGGACCCGCTTCACCATCTTTGAGTCATTGGTaGTCAGCGCCGCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: GSGRLAVACGRDPGPASPSLSHW*SAPPGS
Trigger: TGAACCAGGCGGCGCTGATCACCAATGACTCAAAGA...TGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCAGACGTCCGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGGAGCACTGTGATCTTTaGGTCATTGGTGATCAGCGC +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKEHCDL*VIGDQR
Trigger: GCGCTGATCACCAATGACTCAAAGATCACAGTGCTC...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCCTGGGAGCGCACCTTGTCCTTCTCATGGGAGCTGAGGTCGAGGAGGACATGCCTCGCTAATGACCCGTaGCTTTACCATCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: AWERTLSFSWELRSRRTCLANDP*LYHPLQ
Trigger: CTGCAGTGGATGGTAAAGTCACGGGTCATTAGCGAG...GCATGTCCTCCTCGACCTCAGCTCCCATGAGAAGGACAAGGTGCGCTCCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATGCCGAGCCAGGTGCTTaGTCTGGGCTTCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNAEPGA*SGLPCL
Trigger: CAGGCACGGAAGCCCAGATCAAGCACCTGGCTCGGC...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAGCTTCAGCACGTCGCTaGGACGGAAAATTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPASARR*DGKFSC
Trigger: GCAAGAAAATTTTCCGTCTCAGCGACGTGCTGAAGC...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCCCTTCAGGCCCGAGTTaGACTGTGTCACCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGPSGPS*TVSPGW
Trigger: CCAGCCTGGTGACACAGTTCAACTCGGGCCTGAAGG...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGGCACATCCTCCAGGATaGAGGACAGGACCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: DRARAVFPVSPALPRMDMAHPPG*RTGPPP
Trigger: AGGCGGAGGTCCTGTCCTTCATCCTGGAGGATGTGC...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CGGAGTCAATGTTGTGTAATGCGATCAGGAGCTCTCCAGGGTTCAGCGGGGACAGGCGGGACGGGCGCTTaGAGATCAGGTCTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: RSQCCVMRSGALQGSAGTGGTGA*RSGLEV
Trigger: CACTTCGAGACCTGATCTTCAAGCGCCCGTCCCGCC...TGTCCCCGCTGAACCCTGGAGAGCTCCTGATCGCATTACACAACATTGACTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp CGGAGTCAATGTTGTGTAATGCGATCAGGAGCTCTCCAGGGTTCAGCGGGGACAGGATCGGCTGCTCAATaGCCCTCAGCACCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: RSQCCVMRSGALQGSAGTGSAAQ*PSAPSA
Trigger: AGCGGACGGTGCTGAGGGTCATTGAGCAGCCGATCC...TGTCCCCGCTGAACCCTGGAGAGCTCCTGATCGCATTACACAACATTGACTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp ATCAGCTGCTGCATCACCACGGCCAGCACCTCTGACGTGTACACGTTCCGCTCCGTGGGACTTTGTCTGTaGGGCTGTGCAGACATCTCG +
Preference number: 4 (lower is better)
Translates to: ISCCITTASTSDVYTFRSVGLCL*GCADIS
Trigger: CGAGATGTCTGCACAGCCTCACAGACAAAGTCCCAC...GGAGCGGAACGTGTACACGTCAGAGGTGCTGGCCGTGGTGATGCAGCAGCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTTCTGAGGTGGGGCTGTaGGTGACAGTCTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVSEVGL*VTVFDL
Trigger: CAAGTCAAAGACTGTCACTCACAGCCCCACCTCAGA...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCGTGTGTGTGTATGTGTaGACCCCCTCAAACTGTATG +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPVCVYV*TPSNCM
Trigger: CATACAGTTTGAGGGGGTTCACACATACACACACAC...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GGTCAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCGAGGAGATGGCAGGGTaGACCATGAACTTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GQPRVVIHADEDARGLALEEMAG*TMNLSS
Trigger: GCTGCTTAAGTTCATGGTGCACCCTGCCATCTCCTC...GAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCGACTGGCCGGAGATCTaGGCTGAGGCCTTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLDWPEI*AEAFEV
Trigger: GACCTCGAAGGCCTCAGCGCAGATCTCCGGCCAGTC...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGTTGCACTGTTTGGTCTaGTCTACACCTGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKLHCLV*STPGPS
Trigger: ACTGGGACCAGGTGTAGAGCAGACCAAACAGTGCAA...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATGGAGCCCGAGGCACCTaGGGCCAGGTAGGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNGARGT*GQVGVV
Trigger: TACAACGCCTACCTGGCCGCAGGTGCCTCGGGCTCC...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAACATCCTCGCAGTACTTaGGGACCACCTCCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQHPRST*GPPPGH
Trigger: GTGCCCTGGAGGTGGTCCGCAAGTACTGCGAGGATG...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAACATACTCCCGCAGCTaGTCCTTCTCATACATGCGT +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPTYSRS*SFSYMR
Trigger: ACGCATGTATGAGAAGGAGCAGCTGCGGGAGTATGT...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CTTGTCAGCTCCAAACAGCACAGACGGTGGGTTGGGGTGCACCAGGAGCTGCAGATTCCTCGGATCGGCTaGTCAATGACCCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: LVSSKQHRRWVGVHQELQIPRIG*SMTLST
Trigger: GGTGCTGAGGGTCATTGAGCAGCCGATCCGAGGAAT...CTGCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGCTGTTTGGAGCTGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCGAGTTTCCCTCACCATaGTGGGTGCCCAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLEFPSP*WVPSRR
Trigger: CCGCCTGCTGGGCACCCAGCATGGTGAGGGAAACTC...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGGGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCTGCTCCATCAGCTGCTaGATCACCACGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: WDNFPPAGAAPGSSCPFLCSISC*ITTAST
Trigger: GGTGCTGGCCGTGGTGATGCAGCAGCTGATGGAGCA...GAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGAGATCTTTCCTCCCTaGTGGTCTCCCACGAGAGGC +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLEIFPP*WSPTRG
Trigger: GCCTCTCGTGGGAGACCAGCAGGGAGGAAAGATCTC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGCAGGAAGACTGCTGGTaGCTGAGCAGGAGAAAAACT +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKQEDCW*LSRRKT
Trigger: AGTTTTTCTCCTGCTCAGGCACCAGCAGTCTTCCTG...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCCGGGGGAGTGAACAGTaGACAACAAAAGGACTCGAC +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVRGSEQ*TTKGLD
Trigger: GTCGAGTCCTTTTGTTGTGCACTGTTCACTCCCCCG...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GAGACTAGAGTCCAACAGCGCGGCCTCGGTCAGCCCCGAGTCGTCATCCATGCTATGAACATGGGTCTCTaGCGGGCGATATTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: ETRVQQRGLGQPRVVIHAMNMGL*RAILAR
Trigger: CCTTGCCAATATCGCCCGCCAGAGACCCATGTTCAT...AGCATGGATGACGACTCGGGGCTGACCGAGGCCGCGCTGTTGGACTCTAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TGGGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCGTGGTGATCTGGGCCTaGAACTCCAAGGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: WDNFPPAGAAPGSSCPFLVVIWA*NSKEAG
Trigger: CCCGGCTTCCTTGGAGTTCCAGGCCCAGATCACCAC...GAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCGCCAGGTGCTTGATCTaGGCTTCCGTGCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGARCLI*ASVPAD
Trigger: GTCAGCAGGCACGGAAGCCCAGATCAAGCACCTGGC...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGTCTCTGCTCCCTTGGGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTAGGGATAATGGGCTCTaGCCTCCTCTTGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: CLCSLGTIFHQQEQLRGVRDNGL*PPLGLR
Trigger: CCGCAGGCCAAGAGGAGGCCAGAGCCCATTATCCCT...AACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCCCAAGGGAGCAGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCACTCTCTGTGATGAGTaGCGCCTCCAGCACAACCTT +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVTLCDE*RLQHNL
Trigger: AAGGTTGTGCTGGAGGCGCCACTCATCACAGAGAGT...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCCCGCTTCACCAGCTCTaGGGAGGGTGGGACTTTGTC +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGPLHQL*GGWDFV
Trigger: GACAAAGTCCCACCCTCCCCAGAGCTGGTGAAGCGG...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCTCCTCCTACATGGTCAGGGACTaGATGACGGTCCTCATGAGC +
Preference number: 4 (lower is better)
Translates to: SSSMLMKMPGVSHSGPSSYMVRD*MTVLMS
Trigger: GCTCATGAGGACCGTCATCCAGTCCCTGACCATGTA...GGAGGAGGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCATCCAGGGTCTGTCTCTaGCTTATGGATATGTGCACG +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPSRVCL*LMDMCT
Trigger: CGTGCACATATCCATAAGCCAGAGACAGACCCTGGA...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCGCGGATGGGCTGGGCTaGATTGTCACCCGAACACCT +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGADGLG*IVTRTP
Trigger: AGGTGTTCGGGTGACAATCCAGCCCAGCCCATCCGC...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGGTAAAGGGTAAAACCTaGGAGGAAGGAAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLVKGKT*EEGRRR
Trigger: CCTCCTCCTTCCTTCCTCCCAGGTTTTACCCTTTAC...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGTCCCACGAGAGGCCTTaGTGCCTCCTGGGTTTTATA +
Preference number: 4 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMSHERP*CLLGFI
Trigger: TATAAAACCCAGGAGGCACCAAGGCCTCTCGTGGGA...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATGCTGGGGACACCAGCTaGAGGGTTGTCTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYAGDTS*RVVWPA
Trigger: TGCAGGCCAGACAACCCTCCAGCTGGTGTCCCCAGC...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAACTTGGGTTGGGTGCTaGGGACACCAGCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQTWVGC*GHQLEG
Trigger: ACCCTCCAGCTGGTGTCCCCAGCACCCAACCCAAGT...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTAGCAGGAGAAAAACTTaGGTTGGGTGCTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVSRRKT*VGCWGH
Trigger: GTGTCCCCAGCACCCAACCCAAGTTTTTCTCCTGCT...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGCCCGGCCCCTCCTCTTaGGTGAAAAACTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: DRARAVFPVSPALPRMDMPGPSS*VKNCDA
Trigger: GGCATCACAGTTTTTCACTCAAGAGGAGGGGCCGGG...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp AGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCGAGCACTGTGATCTTTaGGTCATTGGTGATCAGCGC +
Preference number: 4 (lower is better)
Translates to: SPESSSMLMKMPGVSHSGEHCDL*VIGDQR
Trigger: GCGCTGATCACCAATGACTCAAAGATCACAGTGCTC...GCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGAGTCCAATAGCAGGATaGTGTCCCCCGCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: DRARAVFPVSPALPRMDMSPIAG*CPPPWQ
Trigger: CTGCCATGGCGGGGGACATCATCCTGCTATTGGACT...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATGGATGCGGTCCAGGCTaGTATCATGCTCCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYGCGPG*YHAPGV
Trigger: GACGCCAGGAGCATGATATCAGCCTGGACCGCATCC...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCGGATCACCTCAGACATaGACATGGGTCTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGGSPQT*TWVSGG
Trigger: CCCGCCAGAGACCCATGTTCATGTCTGAGGTGATCC...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAGCAGGAACTCAGCTGTaGTGTCCGTGTCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQAGTQL*CPCLTG
Trigger: GCCAGTCAGACACGGACATCACAGCTGAGTTCCTGC...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAACCTTCTCATGGGAGCTaGGGTCGAGGAGGACATGCA +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQPSHGS*GRGGHA
Trigger: TGCATGTCCTCCTCGACCTCAGCTCCCATGAGAAGG...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGGTGTGTGTGTATGTGTaGACCCCCTCAAACTGTATG +
Preference number: 4 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQVCVYV*TPSNCM
Trigger: CATACAGTTTGAGGGGGTTCACACATACACACACAC...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCGGTGAGCAGAGGTGCTaGCTTTTCTTAATGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVGEQRC*LFLMLD
Trigger: GTCCAGCATTAAGAAAAGTCAGCACCTCTGCTCACC...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCAGCAGACAGTGGAGGTaGGGACCTGCCAGAAACCGA +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGSRQWR*GPARNR
Trigger: TCGGTTTCTGGCAGGTCCTCACCTCCACTGTCTGCT...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCTGGTCATGCCATCGATaGCCGGCCCCTCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLWSCHR*PAPPLE
Trigger: CTCAAGAGGAGGGGCCGGGCATCGATGGCATGACCA...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCTCTCTGAGGTGGTCATaGCATCGATGCCCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLSLRWS*HRCPAP
Trigger: AGGGGCCGGGCATCGATGGCATGACCACCTCAGAGA...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGAGAGCATGTTGAGGTTTaGAATGAGTTTCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGEHVEV*NEFQQQ
Trigger: TTGCTGCTGAAACTCATTGCAAACCTCAACATGCTC...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGGATTCTTACGCACACTaGTCACCTGCGATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMDSYAH*SPAIWP
Trigger: TGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATC...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGAGCACACTCAACAGGTaGAGCTTCAGATTCTTACGC +
Preference number: 4 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQSTLNR*SFRFLR
Trigger: GCGTAAGAATCTGAAGCTGCACCTGTTGAGTGTGCT...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp AGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCTTGCACTGTTTGGTCTaGTCTACACCTGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SPESSSMLMKMPGVSHSGLHCLV*STPGPS
Trigger: ACTGGGACCAGGTGTAGAGCAGACCAAACAGTGCAA...GCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGTGGTCTGGTTTCTCCTaGAGGCCAGACAACAGGCGG +
Preference number: 4 (lower is better)
Translates to: DRARAVFPVSPALPRMDMWSGFS*RPDNRR
Trigger: CCGCCTGTTGTCTGGCCTGCAGGAGAAACCAGACCA...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CTTGTCAGCTCCAAACAGCACAGACGGTGGGTTGGGGTGCACCAGGAGCTGCAGCTCGAAGTGTGGACATaGCCAGATAGGTGCGACTCT +
Preference number: 4 (lower is better)
Translates to: LVSSKQHRRWVGVHQELQLEVWT*PDRCDS
Trigger: AGAGTCGCACCTATCTGGGCATGTCCACACTTCGAG...CTGCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGCTGTTTGGAGCTGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCACATACTCCCGCAGCTaGTCCTTCTCATACATGCGT +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVTYSRS*SFSYMR
Trigger: ACGCATGTATGAGAAGGAGCAGCTGCGGGAGTATGT...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGGTGGGGCTACCCAACTaGTTTAGGCCCACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: DRARAVFPVSPALPRMDMVGLPN*FRPTLC
Trigger: GCACAGAGTGGGCCTAAAGCAGTTGGGTAGCCCCAC...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCCTGGCCCAGAAACCTTaGTCAGGAGGGATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLLAQKP*SGGMEG
Trigger: CCCCTCCATCCCTCCTGAGCAAGGTTTCTGGGCCAG...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTCAGGAAGACTGCTGGTaGCTGAGCAGGAGAAAAACT +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVQEDCW*LSRRKT
Trigger: AGTTTTTCTCCTGCTCAGGCACCAGCAGTCTTCCTG...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGTTGATGATCAGCTCCTaGACCTGTTTGAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKLMISS*TCLSTV
Trigger: CACAGTGCTCAAACAGGTCCAGGAGCTGATCATCAA...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGAATTGACTTGTCTGCTTaGAATGCGATGATCTCATCC +
Preference number: 4 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGIDLSA*NAMISS
Trigger: GGATGAGATCATCGCATTCCAAGCAGACAAGTCAAT...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGCTCCTGATTGACTTGTCTGCTTaGAATGCGATGATCTCATCC +
Preference number: 4 (lower is better)
Translates to: QIILLQGPRRRLLGLWLLIDLSA*NAMISS
Trigger: GGATGAGATCATCGCATTCCAAGCAGACAAGTCAAT...CAGGAGCCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATGGAAGGAGGCTGGCATaGCCTCGGGTAGGTACACCA +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYGRRLA*PRVGTP
Trigger: TGGTGTACCTACCCGAGGCCATGCCAGCCTCCTTCC...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCGGTCTGCTCTACACCTaGTCCCAGTCCGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLGLLYT*SQSGSC
Trigger: ACAGCTGCCGGACTGGGACCAGGTGTAGAGCAGACC...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATATCTTTATGCGGACCTaGGCTGCCCCGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNIFMRT*AAPLQA
Trigger: GGCCTGCAGCGGGGCAGCCCAGGTCCGCATAAAGAT...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GACCTGGAAGCTCTGGGGCTTTGTGCGCTGGCAGCACTTGATGAAGCCCTCCCAACTGTGTCACCAGGCTaGCCAGGATCTTTATGCGGA +
Preference number: 4 (lower is better)
Translates to: DLEALGLCALAALDEALPTVSPG*PGSLCG
Trigger: TCCGCATAAAGATCCTGGCCAGCCTGGTGACACAGT...TGGGAGGGCTTCATCAAGTGCTGCCAGCGCACAAAGCCCCAGAGCTTCCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp CTTGTCAGCTCCAAACAGCACAGACGGTGGGTTGGGGTGCACCAGGAGCTGCAGACTCTCTGTGATGAGTaGCGCCTCCAGCACAACCTT +
Preference number: 4 (lower is better)
Translates to: LVSSKQHRRWVGVHQELQTLCDE*RLQHNL
Trigger: AAGGTTGTGCTGGAGGCGCCACTCATCACAGAGAGT...CTGCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGCTGTTTGGAGCTGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCTGCAGGTACTGGAACTaGCGGGACGGGCGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLCRYWN*RDGRLK
Trigger: CTTCAAGCGCCCGTCCCGCCAGTTCCAGTACCTGCA...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTGTGTCTCTGCTCCCTTaGGACAATTTTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVVSLLP*DNFPPA
Trigger: TGCTGGTGGAAAATTGTCCCAAGGGAGCAGAGACAC...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CTCCTGCTTGCCGCTGGCCTCCAAGATGGTCATGATGGAGTTAGGGATGTGAGCAGCCCTCCCACACCTTaGGGTACTTCCACACCTGCT +
Preference number: 4 (lower is better)
Translates to: LLLAAGLQDGHDGVRDVSSPPTP*GTSTPA
Trigger: AGCAGGTGTGGAAGTACCCCAAGGTGTGGGAGGGCT...GCTCACATCCCTAACTCCATCATGACCATCTTGGAGGCCAGCGGCAAGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp CTTGTCAGCTCCAAACAGCACAGACGGTGGGTTGGGGTGCACCAGGAGCTGCAGAGCCTCCCAAGTAACTaGGATTACGGGCACATGCCA +
Preference number: 4 (lower is better)
Translates to: LVSSKQHRRWVGVHQELQSLPSN*DYGHMP
Trigger: TGGCATGTGCCCGTAATCCCAGTTACTTGGGAGGCT...CTGCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGCTGTTTGGAGCTGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TGGGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCAACCAGCGGATGGGCTaGGCTGGATTGTCACCCGAA +
Preference number: 4 (lower is better)
Translates to: WDNFPPAGAAPGSSCPFLNQRMG*AGLSPE
Trigger: TTCGGGTGACAATCCAGCCCAGCCCATCCGCTGGTT...GAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCGTAAAGGGTAAAACCTaGGAGGAAGGAAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVVKGKT*EEGRRR
Trigger: CCTCCTCCTTCCTTCCTCCCAGGTTTTACCCTTTAC...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGAGAGGCAGAAAAAGGTaGGTTGTAAAGGGTAAAACC +
Preference number: 4 (lower is better)
Translates to: APRQGQVVTGPACSATPRRGRKR*VVKGKT
Trigger: GGTTTTACCCTTTACAACCCACCTTTTTCTGCCTCT...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCATGAGCATACTGTCCTaGGAATGGGCTAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPMSILS*EWARTF
Trigger: GAAAGTTCTAGCCCATTCCCAGGACAGTATGCTCAT...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGTCAGGGCTTCTAATCTaGGTCCACAAATGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMSGLLI*VHKWPW
Trigger: CCAAGGCCATTTGTGGACCCAGATTAGAAGCCCTGA...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATAGCTGGAGGGTTGTCTaGCCTGCAGCGTGCACGCCT +
Preference number: 4 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNSWRVV*PAACTP
Trigger: AGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCT...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGCTCGACTTTGTGATCTaGAGCTTAGAGTGCAACCAG +
Preference number: 4 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLLDFVI*SLECNQ
Trigger: CTGGTTGCACTCTAAGCTCCAGATCACAAAGTCGAG...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGATCCACCACCCTCTCTaGGGTGGTCATGCCATCGAT +
Preference number: 4 (lower is better)
Translates to: DRARAVFPVSPALPRMDMIHHPL*GGHAID
Trigger: ATCGATGGCATGACCACCTCAGAGAGGGTGGTGGAT...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGGTGGGACTTTGTCTGTaGGGCTGTGCAGACATCTCG +
Preference number: 4 (lower is better)
Translates to: DRARAVFPVSPALPRMDMVGLCL*GCADIS
Trigger: CGAGATGTCTGCACAGCCTCACAGACAAAGTCCCAC...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCTGAGTTTCCCTCACCATGCTGGGTGCCCAGCAGGCGGTTGAAGACTTCCTTCACCACAAACAGCTGCTaGACGATGGGCCACATGAAC +
Preference number: 4 (lower is better)
Translates to: AEFPSPCWVPSRRLKTSFTTNSC*TMGHMN
Trigger: GTTCATGTGGCCCATCGTTCAGCAGCTGTTTGTGGT...GAAGGAAGTCTTCAACCGCCTGCTGGGCACCCAGCATGGTGAGGGAAACTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATCACAGCCCTGGCCTATaGGCCTGGAGATCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYHSPGL*AWRSFL
Trigger: GAGGAAAGATCTCCAGGCTCATAGGCCAGGGCTGTG...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CTCCTGCTTGCCGCTGGCCTCCAAGATGGTCATGATGGAGTTAGGGATGTGAGCTCCAGGCTGATATCATaGTCCTGGCGTCGGGGTATC +
Preference number: 4 (lower is better)
Translates to: LLLAAGLQDGHDGVRDVSSRLIS*SWRRGI
Trigger: GATACCCCGACGCCAGGAGCATGATATCAGCCTGGA...GCTCACATCCCTAACTCCATCATGACCATCTTGGAGGCCAGCGGCAAGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGAGGAGATGGCAGGGTaGACCATGAACTTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLEEMAG*TMNLSS
Trigger: GCTGCTTAAGTTCATGGTGCACCCTGCCATCTCCTC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TCTGACGTGTACACGTTCCGCTCCGCAAAGCACAGGTTGGTGGCTTTGATGATGCTCTGCTCCATCAGCTaGTGCATCACCACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SDVYTFRSAKHRLVALMMLCSIS*CITTAS
Trigger: GCTGGCCGTGGTGATGCAGCAGCTGATGGAGCAGAG...CATCATCAAAGCCACCAACCTGTGCTTTGCGGAGCGGAACGTGTACACGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp TCTGACGTGTACACGTTCCGCTCCGCAAAGCACAGGTTGGTGGCTTTGATGATGATGGGCAGGGGGCTCTaGTCCATCAGCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: SDVYTFRSAKHRLVALMMMGRGL*SISCCI
Trigger: GATGCAGCAGCTGATGGAGCAGAGCCCCCTGCCCAT...CATCATCAAAGCCACCAACCTGTGCTTTGCGGAGCGGAACGTGTACACGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCGTGGGGCTACCCAACTaGTTTAGGCCCACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLVGLPN*FRPTLC
Trigger: GCACAGAGTGGGCCTAAAGCAGTTGGGTAGCCCCAC...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCGTTTCTCAGAGAACTTaGAGAGGAAGGTTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ALSGEVVLRRGTGRAGIPVSQRT*RGRLGS
Trigger: ACTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAAC...GGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCTGCAACCAGGAAGACTaGTGGTGCCTGAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGCNQED*WCLSRR
Trigger: TCTCCTGCTCAGGCACCAGCAGTCTTCCTGGTTGCA...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCATGAACATGGGTCTCTaGCGGGCGATATTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLMNMGL*RAILAR
Trigger: CCTTGCCAATATCGCCCGCCAGAGACCCATGTTCAT...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATGTGGTGATCTGGGCCTaGAACTCCAAGGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNVVIWA*NSKEAG
Trigger: CCCGGCTTCCTTGGAGTTCCAGGCCCAGATCACCAC...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCAGCAGGGTGGTGATCTaGGCCTGGAACTCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGSRVVI*AWNSKE
Trigger: TTCCTTGGAGTTCCAGGCCCAGATCACCACCCTGCT...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATATGTCCGTGTCTGACTaGCCGGAGATCTGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYMSVSD*PEICAE
Trigger: CTCAGCGCAGATCTCCGGCCAGTCAGACACGGACAT...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATAACCCACCACCGAGATaGCTTGGCCCTGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNNPPPR*LGPGLT
Trigger: TGTCAGCCCAGGGCCAAGCCATCTCGGTGGTGGGTT...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAATTCATGGCTTCCACCTaGGCATCGGTAAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQFMAST*ASVRGF
Trigger: GAAGCCCCTTACCGATGCCCAGGTGGAAGCCATGAA...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GTGTACACGTTCCGCTCCGCAAAGCACAGGTTGGTGGCTTTGATGATGGATTTCCACTGCCGCTCGCCATaGCTGCTGTCAGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: VYTFRSAKHRLVALMMDFHCRSP*LLSACP
Trigger: GGGACAAGCTGACAGCAGCCATGGCGAGCGGCAGTG...GAAATCCATCATCAAAGCCACCAACCTGTGCTTTGCGGAGCGGAACGTGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCCTGGACTGTAAGCCCTaGAAGGACAGGGCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLLDCKP*KDRARA
Trigger: AGCCCTAGCCCTGTCCTTCCAGGGCTTACAGTCCAG...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCCTTCTTGTCTCTCCCTaGACTGTAAGCCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLLLVSP*TVSPGR
Trigger: CCTTCCAGGGCTTACAGTCCAGGGAGAGACAAGAAG...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CAA 72 bp GAGTTTCCCTCACCATGCTGGGTGCCCAGCAGGCGGTaGAAGACTTCCTTCACCACGATGGGGTTGAGTTTG +
Preference number: 4 (lower is better)
Translates to: EFPSPCWVPSRR*KTSFTTMGLSL
Trigger: CAAACTCAACCCCATCGTGGTGAAGGAAGTCTTCAACCGCCTGCTGGGCACCCAGCATGGTGAGGGAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCGCCCCTCCTCTTGAGTaGAAAACTGTGATGCCACGC +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLAPPLE*KTVMPR
Trigger: GCGTGGCATCACAGTTTTTCACTCAAGAGGAGGGGC...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAATCTTTGAGTCATTGGTaGTCAGCGCCGCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQSLSHW*SAPPGS
Trigger: TGAACCAGGCGGCGCTGATCACCAATGACTCAAAGA...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GTGTACACGTTCCGCTCCGCAAAGCACAGGTTGGTGGCTTTGATGATGGATTTCCCTTCAGGCCCGAGTTaGACTGTGTCACCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VYTFRSAKHRLVALMMDFPSGPS*TVSPGW
Trigger: CCAGCCTGGTGACACAGTTCAACTCGGGCCTGAAGG...GAAATCCATCATCAAAGCCACCAACCTGTGCTTTGCGGAGCGGAACGTGTACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGCCAGCACAACCTTGGTaGAGATCCCATCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: DRARAVFPVSPALPRMDMPAQPW*RSHPSG
Trigger: ACCAGAAGGATGGGATCTTCACCAAGGTTGTGCTGG...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATCCTTCTCATGGGAGCTaGGGTCGAGGAGGACATGCA +
Preference number: 4 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNPSHGS*GRGGHA
Trigger: TGCATGTCCTCCTCGACCTCAGCTCCCATGAGAAGG...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp AGTCAATGTTGTGTAATGCGATCAGGAGCTCTCCAGGGTTCAGCGGGGACAAGGTGCCCAGCAGGCGGTTaGAGACTTCCTTCACCACGA +
Preference number: 4 (lower is better)
Translates to: SQCCVMRSGALQGSAGTRCPAGG*RLPSPR
Trigger: TCGTGGTGAAGGAAGTCTTCAACCGCCTGCTGGGCA...CCTTGTCCCCGCTGAACCCTGGAGAGCTCCTGATCGCATTACACAACATTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAGAGCATGTTGAGGTTTaGAATGAGTTTCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPEHVEV*NEFQQQ
Trigger: TTGCTGCTGAAACTCATTGCAAACCTCAACATGCTC...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATGACGGAAAATTTTCTTaGGCCCACCAGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYDGKFS*AHQRLP
Trigger: TGGCAGGCGCTGGTGGGCGCAAGAAAATTTTCCGTC...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATCTCGGCCTCCCAAAGTaGAGGGATTACAGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYLGLPK*RDYRRE
Trigger: TTCACGCCTGTAATCCCTGCACTTTGGGAGGCCGAG...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR GCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCATCTGGAGCTTAGAGTaGAACCAGGAAGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLIWSLE*NQEDCW
Trigger: CCAGCAGTCTTCCTGGTTGCACTCTAAGCTCCAGAT...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CTCCTGCTTGCCGCTGGCCTCCAAGATGGTCATGATGGAGTTAGGGATGTGAGCCTGATATCATGCTCCTaGCGTCGGGGTATCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLLAAGLQDGHDGVRDVSLISCS*RRGISE
Trigger: CTCAGAGATACCCCGACGCCAGGAGCATGATATCAG...GCTCACATCCCTAACTCCATCATGACCATCTTGGAGGCCAGCGGCAAGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCACTCTCTGTGATGAGTaGCGCCTCCAGCACAACCTT +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGTLCDE*RLQHNL
Trigger: AAGGTTGTGCTGGAGGCGCCACTCATCACAGAGAGT...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCTCAGGTCTCGAAGTGTaGACATGCCCAGATAGGTGC +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGSGLEV*TCPDRC
Trigger: GCACCTATCTGGGCATGTCCACACTTCGAGACCTGA...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp AGTCAATGTTGTGTAATGCGATCAGGAGCTCTCCAGGGTTCAGCGGGGACAAGGGAGGAAGCGGACGTCTaGCAGTCGCTTGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: SQCCVMRSGALQGSAGTREEADV*QSLVVE
Trigger: CTCTACCACAAGCGACTGCCAGACGTCCGCTTCCTC...CCTTGTCCCCGCTGAACCCTGGAGAGCTCCTGATCGCATTACACAACATTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAGCAGGAGAAAAACTTaGGTTGGGTGCTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQSRRKT*VGCWGH
Trigger: GTGTCCCCAGCACCCAACCCAAGTTTTTCTCCTGCT...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAATACCCAGGATGGATATaGGTGAGCAGAGGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQYPGWI*VSRGAD
Trigger: GTCAGCACCTCTGCTCACCCATATCCATCCTGGGTA...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGGAGCACTGTGATCTTTaGGTCATTGGTGATCAGCGC +
Preference number: 4 (lower is better)
Translates to: DRARAVFPVSPALPRMDMEHCDL*VIGDQR
Trigger: GCGCTGATCACCAATGACTCAAAGATCACAGTGCTC...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGGTGGGGGCATGTGGGTaGCTGAGGTCCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKVGACG*LRSCPG
Trigger: GCCAGGGCAGGACCTCAGTCACCCACATGCCCCCAC...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAGTGAGTGACAGTCTTTaGCTTGGCAGATTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQVSDSL*LGRFQW
Trigger: CCACTGGAATCTGCCAAGTCAAAGACTGTCACTCAC...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATGCGCAGAGTGCTCAGTaGGTGGGGGCCATCGTGAGG +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNAQSAQ*VGAIVR
Trigger: CCTCACGATGGCCCCCACTCACTGAGCACTCTGCGC...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCCAGGATGGATATGGGTaGGCAGAGGTGCTGACTTTT +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGQDGYG*AEVLTF
Trigger: AAAAGTCAGCACCTCTGCTCACCCATATCCATCCTG...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGCCAGGAAGTCTTTATTaGGCCAGAAGAGCACCCCAA +
Preference number: 4 (lower is better)
Translates to: DRARAVFPVSPALPRMDMPGSLY*ARRAPQ
Trigger: TTGGGGTGCTCTTCTGGCTCAATAAAGACTTCCTGG...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599460.5
CDS-3UTR GCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATGCGCCCCCTCAGCAGTaGCTCTTCCTACACTCCGCC +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNAPPQQ*LFLHSA
Trigger: GGCGGAGTGTAGGAAGAGGCACTGCTGAGGGGGCGC...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000599460.5
CDS-3UTR GCA 90 bp TGTACACGGCCGCCAGTTCGTGGATCAGCTTGTGGTTCTGAGGCAGGAGGGCCACTTGTCTGCTTGGAATaGGATGATCTCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: CTRPPVRGSACGSEAGGPLVCLE*DDLIQE
Trigger: TTCCTGGATGAGATCATCGCATTCCAAGCAGACAAG...TGGCCCTCCTGCCTCAGAACCACAAGCTGATCCACGAACTGGCGGCCGTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp CAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGGAGCATGTTGAGGTTTaGAATGAGTTTCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QPRVVIHADEDARGLALREHVEV*NEFQQQ
Trigger: TTGCTGCTGAAACTCATTGCAAACCTCAACATGCTC...CCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATGAGGAGATGGCAGGGTaGACCATGAACTTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYEEMAG*TMNLSS
Trigger: GCTGCTTAAGTTCATGGTGCACCCTGCCATCTCCTC...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TCTGACGTGTACACGTTCCGCTCCGCAAAGCACAGGTTGGTGGCTTTGATGATGGACGGAAAATTTTCTTaGGCCCACCAGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SDVYTFRSAKHRLVALMMDGKFS*AHQRLP
Trigger: TGGCAGGCGCTGGTGGGCGCAAGAAAATTTTCCGTC...CATCATCAAAGCCACCAACCTGTGCTTTGCGGAGCGGAACGTGTACACGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATCTCGAAGTGTGGACATaGCCAGATAGGTGCGACTCT +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYLEVWT*PDRCDS
Trigger: AGAGTCGCACCTATCTGGGCATGTCCACACTTCGAG...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCGTTTCTCAGAGAACTTaGAGAGGAAGGTTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVVSQRT*RGRLGS
Trigger: ACTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAAC...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAGACATTTCCATAAGCTaGTCTCTTGACCTTAAACGT +
Preference number: 4 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPDISIS*SLDLKR
Trigger: ACGTTTAAGGTCAAGAGAGCAGCTTATGGAAATGTC...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCCGGGGGAGTGAACAGTaGACAACAAAAGGACTCGAC +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLRGSEQ*TTKGLD
Trigger: GTCGAGTCCTTTTGTTGTGCACTGTTCACTCCCCCG...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATGAGATGGCTTGGCCCTaGGCTGACAGGCGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNEMAWP*ADRRRL
Trigger: CAAGCGGCGCCTGTCAGCCCAGGGCCAAGCCATCTC...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CGGAGTCAATGTTGTGTAATGCGATCAGGAGCTCTCCAGGGTTCAGCGGGGACATCCCCTCTCTCCATCTaGGATATGCTTTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: RSQCCVMRSGALQGSAGTSPLSI*DMLWTG
Trigger: CCCAGTCCAAAGCATATCCCAGATGGAGAGAGGGGA...TGTCCCCGCTGAACCCTGGAGAGCTCCTGATCGCATTACACAACATTGACTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCAGAGGCAGAAAAAGGTaGGTTGTAAAGGGTAAAACC +
Preference number: 4 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVRGRKR*VVKGKT
Trigger: GGTTTTACCCTTTACAACCCACCTTTTTCTGCCTCT...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATTACCCAGGATGGATATaGGTGAGCAGAGGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYYPGWI*VSRGAD
Trigger: GTCAGCACCTCTGCTCACCCATATCCATCCTGGGTA...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGTGCGAGACTCCTGTGTaGGCAGGCCCCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKCETPV*AGPRGT
Trigger: GGTGCCCCTGGGGCCTGCCCACACAGGAGTCTCGCA...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CAA 72 bp AGCAGGCGGTTGAAGACTTCCTTCACCACGATGGGGTaGAGTTTGATGAGTTTAGGCAGGGCCTGGATCACC +
Preference number: 4 (lower is better)
Translates to: SRRLKTSFTTMG*SLMSLGRAWIT
Trigger: GGTGATCCAGGCCCTGCCTAAACTCATCAAACTCAACCCCATCGTGGTGAAGGAAGTCTTCAACCGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATGGCCCTCCACAAACTTaGTGGCGTGGGTGCGGATGC +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNGPPQT*WRGCGC
Trigger: GCATCCGCACCCACGCCATCAAGTTTGTGGAGGGCC...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGGGCTTGGCCCTGGGCTaGCAGGCGCCGCTTGATCAG +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWGLALG*QAPLDQ
Trigger: CTGATCAAGCGGCGCCTGTCAGCCCAGGGCCAAGCC...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATGGAGCTGCAGGTAGTTaGGGGCAAATTTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYGAAGS*GQISPH
Trigger: ATGTGGAGAAATTTGCCCTCAACTACCTGCAGCTCC...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCGGAGCTGCAGGTAGTTaGGGGCAAATTTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLGAAGS*GQISPH
Trigger: ATGTGGAGAAATTTGCCCTCAACTACCTGCAGCTCC...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CCCATTCCTCGGATCGGCTGCTCAATGACCCTCAGCACCGTCCGCTTGATGTCGTTAAAAACACAGCTCTaGGGAATATCAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: PIPRIGCSMTLSTVRLMSLKTQL*GISGTE
Trigger: CTCTGTGCCTGATATTCCTCAGAGCTGTGTTTTTAA...CGACATCAAGCGGACGGTGCTGAGGGTCATTGAGCAGCCGATCCGAGGAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGTTTATAATGTGGGTTTaGCATTTCCATAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLFIMWV*HFHKLL
Trigger: GAGCAGCTTATGGAAATGTCAAACCCACATTATAAA...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGTGTATGCAAATAATATaGGCATACTGTCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLCMQII*AYCPGN
Trigger: ATTCCCAGGACAGTATGCTCATATTATTTGCATACA...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATAAGACTGCTGGTGCCTaGGCAGGAGAAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNKTAGA*AGEKLG
Trigger: CCCAAGTTTTTCTCCTGCTCAGGCACCAGCAGTCTT...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATTGGTCTACGGGGGAGTaGACAGTGCACAACAAAAGG +
Preference number: 4 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNWSTGE*TVHNKR
Trigger: CCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCA...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCTGGCTTATGGATATGTaGACGGGGCCTGTAACTTGG +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLWLMDM*TGPVTW
Trigger: CCAAGTTACAGGCCCCGTGCACATATCCATAAGCCA...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR GCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGCTGGAGCCCTGGGTCTaGCCTGCTGCTGCGCCTCTA +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKLEPWV*PAAAPL
Trigger: TAGAGGCGCAGCAGCAGGGCAGACCCAGGGCTCCAG...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATGTTCGTCACCAACCCTaGCGCCCTGCAGGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNVRHQP*RPAGKL
Trigger: GAGCTTGCCTGCAGGGCGGCAGGGTTGGTGACGAAC...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCACACCACTTAGCTTCTaGTTGGCCCTGAGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: KKQGQIPTSACETPVWAGTPLSF*LALSKS
Trigger: TGACTTACTCAGGGCCAAGCAGAAGCTAAGTGGTGT...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATCACGAGAGGCCTTGGTaGCTCCTGGGTTTTATAATG +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYHERPW*LLGFIM
Trigger: CATTATAAAACCCAGGAGGCACCAAGGCCTCTCGTG...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAATTGATGATCAGCTCCTaGACCTGTTTGAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQLMISS*TCLSTV
Trigger: CACAGTGCTCAAACAGGTCCAGGAGCTGATCATCAA...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATACAAACTTGATGGCGTaGGTGCGGATGCCGTCATTG +
Preference number: 4 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNTNLMA*VRMPSL
Trigger: CAATGACGGCATCCGCACCCACGCCATCAAGTTTGT...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp AGTCAATGTTGTGTAATGCGATCAGGAGCTCTCCAGGGTTCAGCGGGGACAAGGACAAACTTGATGGCGTaGGTGCGGATGCCGTCATTG +
Preference number: 4 (lower is better)
Translates to: SQCCVMRSGALQGSAGTRTNLMA*VRMPSL
Trigger: CAATGACGGCATCCGCACCCACGCCATCAAGTTTGT...CCTTGTCCCCGCTGAACCCTGGAGAGCTCCTGATCGCATTACACAACATTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATGTGTCTCTGCTCCCTTaGGACAATTTTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYVSLLP*DNFPPA
Trigger: TGCTGGTGGAAAATTGTCCCAAGGGAGCAGAGACAC...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATTCCCCTCTCTCCATCTaGGATATGCTTTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNSPLSI*DMLWTG
Trigger: CCCAGTCCAAAGCATATCCCAGATGGAGAGAGGGGA...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CCA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTGTTTCAGCCACTCTCTaGAATATCATGAAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVVSATL*NIMKLF
Trigger: AAACAGCTTCATGATATTCCAGAGAGTGGCTGAAAC...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CCA 90 bp TGGGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCCAGGAAAGAAGAGGATaGATCAAGCTCAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: WDNFPPAGAAPGSSCPFLQERRG*IKLREP
Trigger: TGGTTCCCTGAGCTTGATCCATCCTCTTCTTTCCTG...GAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCACTGAGGTCCTGCCCTaGCGTCGCAGGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSTEVLP*RRRGQA
Trigger: GGCCTGGCCCCTGCGACGCCAGGGCAGGACCTCAGT...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATCTGCCTCACCTACCCTaGCCCACAAGTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNLPHLP*PTSALE
Trigger: CTCCAGGGCACTTGTGGGCCAGGGTAGGTGAGGCAG...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCATGAGCATACTGTCCTaGGAATGGGCTAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLMSILS*EWARTF
Trigger: GAAAGTTCTAGCCCATTCCCAGGACAGTATGCTCAT...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGGGCTTCCGTGCCTGCTaGCTCCACGGGGGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKGFRAC*LHGGVD
Trigger: ATCTACACCCCCGTGGAGTCAGCAGGCACGGAAGCC...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATCCTTCAGGCCCGAGTTaGACTGTGTCACCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNPSGPS*TVSPGW
Trigger: CCAGCCTGGTGACACAGTTCAACTCGGGCCTGAAGG...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATCAGCGGGGACAAGGCTaGGTTTCCCTCACCATGCTG +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNQRGQG*VSLTML
Trigger: CAGCATGGTGAGGGAAACTCAGCCTTGTCCCCGCTG...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGCGCACACTGCTCACCTaGGATTTGGCCAGCGTCGGG +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKRTLLT*DLASVG
Trigger: CCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCG...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATAGCACACTCAACAGGTaGAGCTTCAGATTCTTACGC +
Preference number: 4 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYSTLNR*SFRFLR
Trigger: GCGTAAGAATCTGAAGCTGCACCTGTTGAGTGTGCT...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGGTCTGGCCTGCAGCGTaGACGCCTGGGCGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKVWPAA*TPGRVE
Trigger: TTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGAC...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATGTGGAGGTGAGGACCTaGCAGAAACCGAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNVEVRT*QKPRKP
Trigger: GGGCTTCCTCGGTTTCTGGCAGGTCCTCACCTCCAC...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TCTGACGTGTACACGTTCCGCTCCGCAAAGCACAGGTTGGTGGCTTTGATGATGAGGGTTTCACCATGTTaGCCAGGCTGGTGTCAAACT +
Preference number: 4 (lower is better)
Translates to: SDVYTFRSAKHRLVALMMRVSPC*PGWCQT
Trigger: AGTTTGACACCAGCCTGGCCAACATGGTGAAACCCT...CATCATCAAAGCCACCAACCTGTGCTTTGCGGAGCGGAACGTGTACACGTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TGTACACGGCCGCCAGTTCGTGGATCAGCTTGTGGTTCTGAGGCAGGAGGGCCAGTTTCAGCCACTCTCTaGAATATCATGAAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: CTRPPVRGSACGSEAGGPVSATL*NIMKLF
Trigger: AAACAGCTTCATGATATTCCAGAGAGTGGCTGAAAC...TGGCCCTCCTGCCTCAGAACCACAAGCTGATCCACGAACTGGCGGCCGTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp GTGTACACGTTCCGCTCCGCAAAGCACAGGTTGGTGGCTTTGATGATGGATTTCAGTCTCAGCCTCAAGTaGGCCAACCACAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: VYTFRSAKHRLVALMMDFSLSLK*ANHKQL
Trigger: CAGCTGTTTGTGGTTGGCCCACTTGAGGCTGAGACT...GAAATCCATCATCAAAGCCACCAACCTGTGCTTTGCGGAGCGGAACGTGTACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCAGTGCCCTGGAGCCCTaGGTCTGCCCTGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSSALEP*VCPAAA
Trigger: CGCAGCAGCAGGGCAGACCCAGGGCTCCAGGGCACT...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGCTCGTCAGGGCCAGGTaGTCACTGGTCCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKLVRAR*SLVLPA
Trigger: AGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAG...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGGGATCGGCTGCTCAATaGCCCTCAGCACCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWGSAAQ*PSAPSA
Trigger: AGCGGACGGTGCTGAGGGTCATTGAGCAGCCGATCC...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATTGCCCAGCAGGCGGTTaGAGACTTCCTTCACCACGA +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNCPAGG*RLPSPR
Trigger: TCGTGGTGAAGGAAGTCTTCAACCGCCTGCTGGGCA...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGTGGTCATGCCATCGATaGCCGGCCCCTCCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKWSCHR*PAPPLE
Trigger: CTCAAGAGGAGGGGCCGGGCATCGATGGCATGACCA...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCCTTGTCTGCTTGGAATaGGATGATCTCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLLVCLE*DDLIQE
Trigger: TTCCTGGATGAGATCATCGCATTCCAAGCAGACAAG...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp AGTCAATGTTGTGTAATGCGATCAGGAGCTCTCCAGGGTTCAGCGGGGACAAGGAGCACACTCAACAGGTaGAGCTTCAGATTCTTACGC +
Preference number: 4 (lower is better)
Translates to: SQCCVMRSGALQGSAGTRSTLNR*SFRFLR
Trigger: GCGTAAGAATCTGAAGCTGCACCTGTTGAGTGTGCT...CCTTGTCCCCGCTGAACCCTGGAGAGCTCCTGATCGCATTACACAACATTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR GCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGCATCGCGGGGCCGCTTaGGGGTGTCCTTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQHRGAA*GCPCCS
Trigger: CGAGCAGCAAGGACACCCGCAAGCGGCCCCGCGATG...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCGGAGCCCGAGGCACCTaGGGCCAGGTAGGCGTTGTA +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSGARGT*GQVGVV
Trigger: TACAACGCCTACCTGGCCGCAGGTGCCTCGGGCTCC...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGGTGGTGATCTGGGCCTaGAACTCCAAGGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKVVIWA*NSKEAG
Trigger: CCCGGCTTCCTTGGAGTTCCAGGCCCAGATCACCAC...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGAGGACATGCAGGTACTaGAACTGGCGGGACGGGCGC +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWRTCRY*NWRDGR
Trigger: GCGCCCGTCCCGCCAGTTCCAGTACCTGCATGTCCT...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGTCCAGTGGGGGCATGTaGGTGACTGAGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWSSGGM*VTEVLP
Trigger: GGGCAGGACCTCAGTCACCCACATGCCCCCACTGGA...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATGGACAGGATGGCTCCTaGCCCAGAAACCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNGQDGS*PRNLAQ
Trigger: CTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCC...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCATACTGTCCTGGGAATaGGCTAGAACTTTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLILSWE*ARTFLR
Trigger: TCTGAGGAAAGTTCTAGCCCATTCCCAGGACAGTAT...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CAA 72 bp CGGTTGAAGACTTCCTTCACCACGATGGGGTTGAGTTaGATGAGTTTAGGCAGGGCCTGGATCACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RLKTSFTTMGLS*MSLGRAWITSF
Trigger: GAAAGAGGTGATCCAGGCCCTGCCTAAACTCATCAAACTCAACCCCATCGTGGTGAAGGAAGTCTTCAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGGGATCACCTCAGACATaGACATGGGTCTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKGSPQT*TWVSGG
Trigger: CCCGCCAGAGACCCATGTTCATGTCTGAGGTGATCC...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCGGCTTCCGTGCCTGCTaGCTCCACGGGGGTGTAGAT +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSGFRAC*LHGGVD
Trigger: ATCTACACCCCCGTGGAGTCAGCAGGCACGGAAGCC...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGTGCCCAGCAGGCGGTTaGAGACTTCCTTCACCACGA +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKCPAGG*RLPSPR
Trigger: TCGTGGTGAAGGAAGTCTTCAACCGCCTGCTGGGCA...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCTTTATAATGTGGGTTTaGCATTTCCATAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLFIMWV*HFHKLL
Trigger: GAGCAGCTTATGGAAATGTCAAACCCACATTATAAA...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCTGTATGCAAATAATATaGGCATACTGTCCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLCMQII*AYCPGN
Trigger: ATTCCCAGGACAGTATGCTCATATTATTTGCATACA...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATTCCAGGCTGATATCATaGTCCTGGCGTCGGGGTATC +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNSRLIS*SWRRGI
Trigger: GATACCCCGACGCCAGGAGCATGATATCAGCCTGGA...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGGCTCCAAGGCTGCCTTaGCCTCTTCCCATAGCACGT +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKAPRLP*PLPIAR
Trigger: ACGTGCTATGGGAAGAGGGCAAGGCAGCCTTGGAGC...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATGACGGAAAATTTTCTTaGGCCCACCAGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNDGKFS*AHQRLP
Trigger: TGGCAGGCGCTGGTGGGCGCAAGAAAATTTTCCGTC...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGAGGTCGAGGAGGACATaGAGGTACTGGAACTGGCGG +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKRSRRT*RYWNWR
Trigger: CCGCCAGTTCCAGTACCTGCATGTCCTCCTCGACCT...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATTTTAGGCCCACTCTGTaGCAGGGCACAGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNFRPTL*QGTAGT
Trigger: TGTACCTGCTGTGCCCTGGCACAGAGTGGGCCTAAA...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGGTCCCTGCAGTCTCCTaGTGCTGCCGCCTACTCATC +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWVPAVS*CCRLLI
Trigger: GATGAGTAGGCGGCAGCAGCAGGAGACTGCAGGGAC...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGACCTCCCTCGGTCCCTaGAGTCTCCTGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQTSLGP*SLLLLP
Trigger: CGGCAGCAGCAGGAGACTGCAGGGACCGAGGGAGGT...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGATTCCCACCTCGGCCTaGGAGACTCCTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWIPTSA*ETPVWA
Trigger: TGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAAT...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGCTCACCTGCGATTTaGCCAGCGTCGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSCSPAI*PASGAG
Trigger: ACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCA...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATTTCATGGCTTCCACCTaGGCATCGGTAAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNFMAST*ASVRGF
Trigger: GAAGCCCCTTACCGATGCCCAGGTGGAAGCCATGAA...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCATCTTTATGCGGACCTaGGCTGCCCCGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSIFMRT*AAPLQA
Trigger: GGCCTGCAGCGGGGCAGCCCAGGTCCGCATAAAGAT...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGTGCAGGTACTGGAACTaGCGGGACGGGCGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWCRYWN*RDGRLK
Trigger: CTTCAAGCGCCCGTCCCGCCAGTTCCAGTACCTGCA...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGATGAACAGCAGGGCCTaGGAGCGCACCTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKMNSRA*ERTLSF
Trigger: GAAGGACAAGGTGCGCTCCCAGGCCCTGCTGTTCAT...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGACTTGGGTTGGGTGCTaGGGACACCAGCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWTWVGC*GHQLEG
Trigger: ACCCTCCAGCTGGTGTCCCCAGCACCCAACCCAAGT...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGGGGGAGGAGGCTGAATaGGCAGAGCAGACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWGEEAE*AEQTVE
Trigger: CTCCACTGTCTGCTCTGCCCATTCAGCCTCCTCCCC...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CAA 72 bp GATTCTGTTTCTTCTACCACACCACTTAGCTTCTGCTaGGCCCTGAGTAAGTCACCTAACCTCTCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: DSVSSTTPLSFC*ALSKSPNLSGA
Trigger: GGCTCCAGAGAGGTTAGGTGACTTACTCAGGGCCAAGCAGAAGCTAAGTGGTGTGGTAGAAGAAACAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
3UTR CAA 72 bp CAGCCTGAAGGGTGTTTTGGAAAGCTCAGACCTGACTaGCCTCCCAGAGACCCTCAAGAAACAAGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: QPEGCFGKLRPD*PPRDPQETRSN
Trigger: ATTTGACCTTGTTTCTTGAGGGTCTCTGGGAGGCAAGTCAGGTCTGAGCTTTCCAAAACACCCTTCAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGGCAGGAACTCAGCTGTaGTGTCCGTGTCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWAGTQL*CPCLTG
Trigger: GCCAGTCAGACACGGACATCACAGCTGAGTTCCTGC...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGTGCTGCTCGGCATGTTaGGGGCGATCTCGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQCCSAC*GRSRPE
Trigger: CTCAGGCCGAGATCGCCCGCAACATGCCGAGCAGCA...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCCTCCTCCGTCCAGGGTaGTGCCACCTCTGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSLLRPG*CHLCVL
Trigger: AAGGACACAGAGGTGGCAGCACCCTGGACGGAGGAG...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGGAGCCCAGCGCAGAGTaGTCAGTGAGTGGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQEPSAE*SVSGGH
Trigger: ATGGCCCCCACTCACTGAGCACTCTGCGCTGGGCTC...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGGTGATCAGCGCCGCCTaGTTCAGAAGATCCACCACC +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWVISAA*FRRSTT
Trigger: GGTGGTGGATCTTCTGAACCAGGCGGCGCTGATCAC...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCGGAAGGAGGCTGGCATaGCCTCGGGTAGGTACACCA +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSGRRLA*PRVGTP
Trigger: TGGTGTACCTACCCGAGGCCATGCCAGCCTCCTTCC...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGCCACGGGGGTGTAGATaGCCTGGAAGGAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQPRGCR*PGRRLA
Trigger: TGCCAGCCTCCTTCCAGGCCATCTACACCCCCGTGG...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATCCTCCTTGCACTGTTTaGTCTGCTCTACACCTGGTC +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNPPCTV*SALHLV
Trigger: GACCAGGTGTAGAGCAGACCAAACAGTGCAAGGAGG...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGGAGGAAGCGGACGTCTaGCAGTCGCTTGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWEEADV*QSLVVE
Trigger: CTCTACCACAAGCGACTGCCAGACGTCCGCTTCCTC...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATAGCCTCCCAAGTAACTaGGATTACGGGCACATGCCA +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNSLPSN*DYGHMP
Trigger: TGGCATGTGCCCGTAATCCCAGTTACTTGGGAGGCT...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATAGTCTCAGCCTCAAGTaGGCCAACCACAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNSLSLK*ANHKQL
Trigger: CAGCTGTTTGTGGTTGGCCCACTTGAGGCTGAGACT...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599814.5
3UTR CAA 72 bp ATGATGGATTTCATGTCGCACTTCACGGAGTCAATGTaGTGTAATGCGATCAGGAGCTCTCCAGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: MMDFMSHFTESM*CNAIRSSPGFS
Trigger: GCTGAACCCTGGAGAGCTCCTGATCGCATTACACAACATTGACTCCGTGAAGTGCGACATGAAATCCATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR TCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATGTGAGTGACAGTCTTTaGCTTGGCAGATTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNVSDSL*LGRFQW
Trigger: CCACTGGAATCTGCCAAGTCAAAGACTGTCACTCAC...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGTGGTCTACGGGGGAGTaGACAGTGCACAACAAAAGG +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKWSTGE*TVHNKR
Trigger: CCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCA...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGCGTGGGTGCGGATaGCGTCATTGTCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSWRGCG*RHCQSP
Trigger: TGGACTCTGACAATGACGGCATCCGCACCCACGCCA...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGTCCAAGGAAGCCGGGTaGTTCAGCACACTCAACAGG +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWSKEAG*FSTLNR
Trigger: CCTGTTGAGTGTGCTGAAGCACCCGGCTTCCTTGGA...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGACATGCCCAGATAGGTaGGACTCTCATCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKTCPDR*DSHPRS
Trigger: ACTGCGAGGATGAGAGTCGCACCTATCTGGGCATGT...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGCCTCCTTGCACTGTTTaGTCTGCTCTACACCTGGTC +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKPPCTV*SALHLV
Trigger: GACCAGGTGTAGAGCAGACCAAACAGTGCAAGGAGG...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATAAGATCCCATCCTTCTaGTCTGGTTTCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNKIPSF*SGFSCR
Trigger: CCTGCAGGAGAAACCAGACCAGAAGGATGGGATCTT...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGTCCCACGAGAGGCCTTaGTGCCTCCTGGGTTTTATA +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKSHERP*CLLGFI
Trigger: TATAAAACCCAGGAGGCACCAAGGCCTCTCGTGGGA...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATTCAGGGCTTCTAATCTaGGTCCACAAATGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNSGLLI*VHKWPW
Trigger: CCAAGGCCATTTGTGGACCCAGATTAGAAGCCCTGA...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGGGGCACCTTTCCCAATaGCGACAGCCTGACCTCCTC +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQGHLSQ*RQPDLL
Trigger: GAGGAGGTCAGGCTGTCGCCATTGGGAAAGGTGCCC...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGCTCGCTAATGACCCGTaGCTTTACCATCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWLANDP*LYHPLQ
Trigger: CTGCAGTGGATGGTAAAGTCACGGGTCATTAGCGAG...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCCTGGTGTCAAACTCCTaGCCTCAGGTGTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSLVSNS*PQVFHL
Trigger: CAGGTGGAACACCTGAGGTCAGGAGTTTGACACCAG...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR GCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGGCTCCAAGGCTGCCTTaGCCTCTTCCCATAGCACGT +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQAPRLP*PLPIAR
Trigger: ACGTGCTATGGGAAGAGGGCAAGGCAGCCTTGGAGC...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGGGCGTCAGCAGAGGCTaGAGGAACTCAGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQGVSRG*RNSAVM
Trigger: CATCACAGCTGAGTTCCTGCAGCCTCTGCTGACGCC...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGATGAGCCGAGCCAGGTaGTTGATCTGGGCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQMSRAR*LIWASV
Trigger: CACGGAAGCCCAGATCAAGCACCTGGCTCGGCTCAT...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTTTAGGCCCACTCTGTaGCAGGGCACAGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSFRPTL*QGTAGT
Trigger: TGTACCTGCTGTGCCCTGGCACAGAGTGGGCCTAAA...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGACTCACGGTGTGCCCTaGTTCCTTCTGTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQTHGVP*FLLFLG
Trigger: CCCGAGGAACAGAAGGAAGCAGGGCACACCGTGAGT...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGATCTGGAGCTTAGAGTaGAACCAGGAAGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKIWSLE*NQEDCW
Trigger: CCAGCAGTCTTCCTGGTTGCACTCTAAGCTCCAGAT...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCAGCAGGGTGGTGATCTaGGCCTGGAACTCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSSRVVI*AWNSKE
Trigger: TTCCTTGGAGTTCCAGGCCCAGATCACCACCCTGCT...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGTCTGTCTCTGGCTTATaGATATGTGCACGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWSVSGL*ICARGL
Trigger: CAGGCCCCGTGCACATATCCATAAGCCAGAGACAGA...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGAACCAGCGGATGGGCTaGGCTGGATTGTCACCCGAA +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQNQRMG*AGLSPE
Trigger: TTCGGGTGACAATCCAGCCCAGCCCATCCGCTGGTT...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGCTGGACTGTAAGCCCTaGAAGGACAGGGCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQLDCKP*KDRARA
Trigger: AGCCCTAGCCCTGTCCTTCCAGGGCTTACAGTCCAG...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGCCAGCTTCATCTTCTTaGGTGTGGAGTCCGAGTCAT +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWPASSS*VWSPSH
Trigger: ATGACTCGGACTCCACACTCAAGAAGATGAAGCTGG...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATCTTGTCTGCTTGGAATaGGATGATCTCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNLVCLE*DDLIQE
Trigger: TTCCTGGATGAGATCATCGCATTCCAAGCAGACAAG...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGATTCCTCGGATCGGCTaGTCAATGACCCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQIPRIG*SMTLST
Trigger: GGTGCTGAGGGTCATTGAGCAGCCGATCCGAGGAAT...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGCACGAGAGGCCTTGGTaGCTCCTGGGTTTTATAATG +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWHERPW*LLGFIM
Trigger: CATTATAAAACCCAGGAGGCACCAAGGCCTCTCGTG...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCACAAACTTGATGGCGTaGGTGCGGATGCCGTCATTG +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSTNLMA*VRMPSL
Trigger: CAATGACGGCATCCGCACCCACGCCATCAAGTTTGT...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCACTGTGTCACCAGGCTaGCCAGGATCTTTATGCGGA +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSTVSPG*PGSLCG
Trigger: TCCGCATAAAGATCCTGGCCAGCCTGGTGACACAGT...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGAGGGTTTCACCATGTTaGCCAGGCTGGTGTCAAACT +
Preference number: 4 (lower is better)
Translates to: VCVNPLKLYANNMSILSWRVSPC*PGWCQT
Trigger: AGTTTGACACCAGCCTGGCCAACATGGTGAAACCCT...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGCAGGAAAGAAGAGGATaGATCAAGCTCAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKQERRG*IKLREP
Trigger: TGGTTCCCTGAGCTTGATCCATCCTCTTCTTTCCTG...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR TCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGTTGAGTGAAAAACTGTaGTGCCACGCTCCGACGGGT +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQLSEKL*CHAPTG
Trigger: ACCCGTCGGAGCGTGGCATCACAGTTTTTCACTCAA...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGTCTTTGAGTCATTGGTaGTCAGCGCCGCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQSLSHW*SAPPGS
Trigger: TGAACCAGGCGGCGCTGATCACCAATGACTCAAAGA...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGTCTGAGGTGGGGCTGTaGGTGACAGTCTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQSEVGL*VTVFDL
Trigger: CAAGTCAAAGACTGTCACTCACAGCCCCACCTCAGA...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCGATTCTTACGCACACTaGTCACCTGCGATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSDSYAH*SPAIWP
Trigger: TGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATC...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGCTGATATCATGCTCCTaGCGTCGGGGTATCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQLISCS*RRGISE
Trigger: CTCAGAGATACCCCGACGCCAGGAGCATGATATCAG...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCAAGATCCCATCCTTCTaGTCTGGTTTCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSKIPSF*SGFSCR
Trigger: CCTGCAGGAGAAACCAGACCAGAAGGATGGGATCTT...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGTCAGGTCTCGAAGTGTaGACATGCCCAGATAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQSGLEV*TCPDRC
Trigger: GCACCTATCTGGGCATGTCCACACTTCGAGACCTGA...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCAGTTTAGGCAGGGCCTaGATCACCTCTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSSLGRA*ITSFFS
Trigger: GGAGAAGAAAGAGGTGATCCAGGCCCTGCCTAAACT...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGATACTGTCCTGGGAATaGGCTAGAACTTTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKILSWE*ARTFLR
Trigger: TCTGAGGAAAGTTCTAGCCCATTCCCAGGACAGTAT...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGCCAGCTTCATCTTCTTaGGTGTGGAGTCCGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQPASSS*VWSPSH
Trigger: ATGACTCGGACTCCACACTCAAGAAGATGAAGCTGG...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGGCTTCAGCACGTCGCTaGGACGGAAAATTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQASARR*DGKFSC
Trigger: GCAAGAAAATTTTCCGTCTCAGCGACGTGCTGAAGC...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR TCA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGTTAAAAACACAGCTCTaGGGAATATCAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKLKTQL*GISGTE
Trigger: CTCTGTGCCTGATATTCCTCAGAGCTGTGTTTTTAA...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR GCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGACACCACTTAGCTTCTaGTTGGCCCTGAGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQTPLSF*LALSKS
Trigger: TGACTTACTCAGGGCCAAGCAGAAGCTAAGTGGTGT...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR GCA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCGACATTTCCATAAGCTaGTCTCTTGACCTTAAACGT +
Preference number: 4 (lower is better)
Translates to: CVCVNPLKLYANNMSILSDISIS*SLDLKR
Trigger: ACGTTTAAGGTCAAGAGAGCAGCTTATGGAAATGTC...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CCA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGATTGACTTGTCTGCTTaGAATGCGATGATCTCATCC +
Preference number: 4 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQIDLSA*NAMISS
Trigger: GGATGAGATCATCGCATTCCAAGCAGACAAGTCAAT...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CGGGCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCGCTTGCGGGTGTCCTaGCTGCTCGGCATGTTGCGG +
Preference number: 5 (lower is better)
Translates to: RAWPGRRRGRGGGRGGGSRLRVS*LLGMLR
Trigger: CCGCAACATGCCGAGCAGCAAGGACACCCGCAAGCG...GGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp CGGGCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCGCCTCTGGCTCCTGCTaGCCGCTGGCCTCCAAGATG +
Preference number: 5 (lower is better)
Translates to: RAWPGRRRGRGGGRGGGSASGSC*PLASKM
Trigger: CATCTTGGAGGCCAGCGGCAAGCAGGAGCCAGAGGC...GGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CAA 90 bp GGGCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCGCCTGGGAGCGCACCTaGTCCTTCTCATGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GPGRADGEGEGEEEEGAPAWERT*SFSWEL
Trigger: CAGCTCCCATGAGAAGGACAAGGTGCGCTCCCAGGC...GGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp GCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACCGGAGCTCTGGGCACTaGTCAAAGACGGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: AWPGRRRGRGGGRGGGSHRSSGH*SKTAPS
Trigger: GCTGGGAGCCGTCTTTGACAAGTGCCCAGAGCTCCG...GTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS GCA 90 bp AGTCATCGCGGGGCCGCTTGCGGGTGTCCTTGCTGCTCGGCATGTTaGGGGCGATCTCGGCCTGAGGTGTGCCCAGGTCCACCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SHRGAACGCPCCSAC*GRSRPEVCPGPPAG
Trigger: CCCTGCTGGTGGACCTGGGCACACCTCAGGCCGAGATCGCCCGCAACATGCCGAGCAGCAAGGACACCCGCAAGCGGCCCCGCGATGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000596518.1
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601582.1
CDS-3UTR CAA 90 bp TCCTCCCGGAAATCCATGGCTTCCTCAGACGGGGGCGGGCCTGGCCGGGCCGACAGCCGAGCCAGGTGCTaGATCTGGGCTTCCGTGCCT +
Preference number: 5 (lower is better)
Translates to: SSRKSMASSDGGGPGRADSRARC*IWASVP
Trigger: AGGCACGGAAGCCCAGATCAAGCACCTGGCTCGGCT...GTCGGCCCGGCCAGGCCCGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp GGTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCTGGCGGGACGGGCGCTaGAAGATCAGGTCTCGAAGT +
Preference number: 5 (lower is better)
Translates to: GARVWGLRSSFKVSPPAAWRDGR*KIRSRS
Trigger: ACTTCGAGACCTGATCTTCAAGCGCCCGTCCCGCCA...GGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS GCA 90 bp GTGTGGAGTCCGAGTCATCGCGGGGCCGCTTGCGGGTGTCCTTGCTaGTCGGCATGTTGCGGGCGATCTCGGCCTGAGGTGTGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: VWSPSHRGAACGCPC*SACCGRSRPEVCPG
Trigger: ACCTGGGCACACCTCAGGCCGAGATCGCCCGCAACATGCCGAGCAGCAAGGACACCCGCAAGCGGCCCCGCGATGACTCGGACTCCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000596518.1
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601582.1
CDS-3UTR CAA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGCTCTGGCGGGCGATATaGGCAAGGGAGCCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: APRQGQVVTGPACSATPRLWRAI*AREPSA
Trigger: AGCGCTGGGCTCCCTTGCCAATATCGCCCGCCAGAG...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TCCTCCCGGAAATCCATGGCTTCCTCAGACGGGGGCGGGCCTGGCCGGGCCGACTCGTCCTCCCCCAGGTaGGGCTCCAGCTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: SSRKSMASSDGGGPGRADSSSPR*GSSFIF
Trigger: GAAGATGAAGCTGGAGCCCAACCTGGGGGAGGACGA...GTCGGCCCGGCCAGGCCCGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp GGGCTCCAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGGTGCGCTGGCAGCACTaGATGAAGCCCTCCCACACC +
Preference number: 5 (lower is better)
Translates to: GLQIILLQGPRRRLLGLWVRWQH*MKPSHT
Trigger: GGTGTGGGAGGGCTTCATCAAGTGCTGCCAGCGCAC...CCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTGGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CAA 90 bp AGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGTCTCCAGGCAGGCAGATCGCTaGAGCCTAGGAGTCGGAGAG +
Preference number: 5 (lower is better)
Translates to: RVWGLRSSFKVSPPAAVSRQADR*SLGVGE
Trigger: CTCTCCGACTCCTAGGCTCAAGCGATCTGCCTGCCT...GGAGACGGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS TCA 90 bp TTGCGGGTGTCCTTGCTGCTCGGCATGTTGCGGGCGATCTCGGCCTaGGGTGTGCCCAGGTCCACCAGCAGGGTGGTGATCTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LRVSLLLGMLRAISA*GVPRSTSRVVIWAW
Trigger: CCAGGCCCAGATCACCACCCTGCTGGTGGACCTGGGCACACCTCAGGCCGAGATCGCCCGCAACATGCCGAGCAGCAAGGACACCCGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000596518.1
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601582.1
CDS-3UTR CAA 90 bp GGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCTGTTCCTCCTCTGGCGGGCGATATaGGCAAGGGAGCCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: GGGRGGGSHSSRLQLLFLLWRAI*AREPSA
Trigger: AGCGCTGGGCTCCCTTGCCAATATCGCCCGCCAGAG...GAGGAACAGAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp GGGCTCCAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGAAGCCCTCCCACACCTaGGGGTACTTCCACACCTGC +
Preference number: 5 (lower is better)
Translates to: GLQIILLQGPRRRLLGLWKPSHT*GYFHTC
Trigger: GCAGGTGTGGAAGTACCCCAAGGTGTGGGAGGGCTT...CCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CAA 90 bp CAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGCTCCTGCGGAGCTCTGGGCACTaGTCAAAGACGGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: QIILLQGPRRRLLGLWLLRSSGH*SKTAPS
Trigger: GCTGGGAGCCGTCTTTGACAAGTGCCCAGAGCTCCG...CAGGAGCCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS TCA 90 bp GGCCATGAGCCGAGCCAGGTGCTTGATCTGGGCTTCCGTGCCTGCTaGCTCCACGGGGGTGTAGATGGCCTGGAAGGAGGCTGGCATGGC +
Preference number: 5 (lower is better)
Translates to: GHEPSQVLDLGFRAC*LHGGVDGLEGGWHG
Trigger: GCCATGCCAGCCTCCTTCCAGGCCATCTACACCCCCGTGGAGTCAGCAGGCACGGAAGCCCAGATCAAGCACCTGGCTCGGCTCATGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS GCA 90 bp CACGCTCCGACGGGTGACGCTGTCTCCACTGCCGCTCGCCATGGCTaGTGTCAGCTTGCAGGTCTCCGTGTGTCCCCTCTCTCCATCTGG +
Preference number: 5 (lower is better)
Translates to: HAPTGDAVSTAARHG*CQLAGLRVSPLSIW
Trigger: CCAGATGGAGAGAGGGGACACACGGAGACCTGCAAGCTGACAGCAGCCATGGCGAGCGGCAGTGGAGACAGCGTCACCCGTCGGAGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601600.1
CDS-3UTR CAA 90 bp CAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGCTCCTGAGCGCTGTGGTCAGGTaGATGGAGGAGATGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QIILLQGPRRRLLGLWLLSAVVR*MEEMAG
Trigger: CCCTGCCATCTCCTCCATCAACCTGACCACAGCGCT...CAGGAGCCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACTCTGGCGGGCGATATaGGCAAGGGAGCCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPLWRAI*AREPSA
Trigger: AGCGCTGGGCTCCCTTGCCAATATCGCCCGCCAGAG...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGCTGCTCACCTGCGATTaGGCCAGCGTCGGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMLLTCD*ASVGGR
Trigger: CCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAG...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GGAAGCGGACGTCTGGCAGTCGCTTGTGGTAGAGATCCCGGACCCGCTTCACCACTGCTCACCTGCGATTaGGCCAGCGTCGGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GSGRLAVACGRDPGPASPLLTCD*ASVGGR
Trigger: CCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAG...TGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCAGACGTCCGCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp GGAAGCGGACGTCTGGCAGTCGCTTGTGGTAGAGATCCCGGACCCGCTTCACCATCATCGCGGGGCCGCTaGCGGGTGTCCTTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GSGRLAVACGRDPGPASPSSRGR*RVSLLL
Trigger: GAGCAGCAAGGACACCCGCAAGCGGCCCCGCGATGA...TGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCAGACGTCCGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp GCCTGGCCGGGCCGACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCAGCTTCATCTTCTaGAGTGTGGAGTCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: AWPGRRRGRGGGRGGGSHSSFIF*SVESES
Trigger: TGACTCGGACTCCACACTCAAGAAGATGAAGCTGGA...GTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTCGGCCCGGCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGAGCACAGACGGTGGGTaGGGGTGCACCAGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQSTDGG*GCTRSC
Trigger: GCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGCT...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp ATCAGCTGCTGCATCACCACGGCCAGCACCTCTGACGTGTACACGTTCCGCTCCCCCGCTGCCGTCTCCTaGGGTAGGGGGCCCTCGAGA +
Preference number: 5 (lower is better)
Translates to: ISCCITTASTSDVYTFRSPAAVS*GRGPSR
Trigger: TCTCGAGGGCCCCCTACCCAAGGAGACGGCAGCGGG...GGAGCGGAACGTGTACACGTCAGAGGTGCTGGCCGTGGTGATGCAGCAGCTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS TCA 90 bp GGGCTCCTGTCCTGCCCTAGCACCCAGAAGAGGACTCACCGGGGCTaGGTGACAGGGATAATGGGCTCTGGCCTCCTCTTGGCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: GLLSCPSTQKRTHRG*VTGIMGSGLLLACG
Trigger: ACCGCAGGCCAAGAGGAGGCCAGAGCCCATTATCCCTGTCACTCAGCCCCGGTGAGTCCTCTTCTGGGTGCTAGGGCAGGACAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598896.5
CDS GCA 90 bp GCGGATGAGGCAGTCCTCATACTTGTCCAGGGAGCCCGAGGCACCTaGGGCCAGGTAGGCGTTGTACTCCTGGTAGAGCCAGGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: ADEAVLILVQGARGT*GQVGVVLLVEPGEG
Trigger: GCCTTCGCCTGGCTCTACCAGGAGTACAACGCCTACCTGGCCGCAGGTGCCTCGGGCTCCCTGGACAAGTATGAGGACTGCCTCATCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000599460.5
ENST00000599814.5
CDS GCA 90 bp AGGGAGGGCAGCACCAGGAGAGGAAGCCTCTCGGGGACAGGAGGGTaGAGGGTCAGCCCCCTCACCCATCCTTCTGGTCTGGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: REGSTRRGSLSGTGG*RVSPLTHPSGLVSP
Trigger: AGGAGAAACCAGACCAGAAGGATGGGTGAGGGGGCTGACCCTGCACCCTCCTGTCCCCGAGAGGCTTCCTCTCCTGGTGCTGCCCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS GCA 90 bp AGCCCAGTCCAGCCCAGTGCAGCCCCCTCGGCACTCCCAGGGCTCTaGCACCTAAACAGGGATTGCCAAAGCCAGGGGCTATGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SPVQPSAAPSALPGL*HLNRDCQSQGLCFL
Trigger: GAGGAAGCATAGCCCCTGGCTTTGGCAATCCCTGTTTAGGTGGCAGAGCCCTGGGAGTGCCGAGGGGGCTGCACTGGGCTGGACTGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593959.1
CDS-3UTR CAA 90 bp CCTCCCGGAAATCCATGGCTTCCTCAGACGGGGGCGGGCCTGGCCGGGCCGACGCGCACTTCGATTGACTaGTCTGCTTGGAATGCGATG +
Preference number: 5 (lower is better)
Translates to: PPGNPWLPQTGAGLAGPTRTSID*SAWNAM
Trigger: CATCGCATTCCAAGCAGACAAGTCAATCGAAGTGCG...CGTCGGCCCGGCCAGGCCCGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCCGCTTGCGGGTGTCCTaGCTGCTCGGCATGTTGCGG +
Preference number: 5 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVRLRVS*LLGMLR
Trigger: CCGCAACATGCCGAGCAGCAAGGACACCCGCAAGCG...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAAGCCGAGCCAGGTGCTaGATCTGGGCTTCCGTGCCT +
Preference number: 5 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPSRARC*IWASVP
Trigger: AGGCACGGAAGCCCAGATCAAGCACCTGGCTCGGCT...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GGGCTCCAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGTCCTTGGGCTCCTCCTaGCACTGTTTGGTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GLQIILLQGPRRRLLGLWSLGSS*HCLVCS
Trigger: AGAGCAGACCAAACAGTGCAAGGAGGAGCCCAAGGA...CCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp AGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCAGCACAGACGGTGGGTaGGGGTGCACCAGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SPESSSMLMKMPGVSHSGSTDGG*GCTRSC
Trigger: GCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGCT...GCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp GACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCTTCTTCTCCAGCCCATaGAGCACCGGGATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: DGEGEGEEEEGAPTPPGFFFSSP*STGMRK
Trigger: CTTCCTCATCCCGGTGCTCAATGGGCTGGAGAAGAA...GAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp TCCTCCCGGAAATCCATGGCTTCCTCAGACGGGGGCGGGCCTGGCCGGGCCGACACGATGGGGTTGAGTTaGATGAGTTTAGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SSRKSMASSDGGGPGRADTMGLS*MSLGRA
Trigger: GGCCCTGCCTAAACTCATCAAACTCAACCCCATCGT...GTCGGCCCGGCCAGGCCCGCCCCCGTCTGAGGAAGCCATGGATTTCCGGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp GGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCTGTTCCTCGTGCCCAGCAGGCGGTaGAAGACTTCCTTCACCACG +
Preference number: 5 (lower is better)
Translates to: GGGRGGGSHSSRLQLLFLVPSRR*KTSFTT
Trigger: CGTGGTGAAGGAAGTCTTCAACCGCCTGCTGGGCAC...GAGGAACAGAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGACTCCCACGAGAGGCCTaGGTGCCTCCTGGGTTTTAT +
Preference number: 5 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGLPREA*VPPGFY
Trigger: ATAAAACCCAGGAGGCACCAAGGCCTCTCGTGGGAG...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS TCA 90 bp GGTCATGCCATCGATGCCCGGCCCCTCCTCTTGAGTGAAAAACTGTaGTGCCACGCTCCGACGGGTGACGCTGTCTCCACTGCCGCTCGC +
Preference number: 5 (lower is better)
Translates to: GHAIDARPLLLSEKL*CHAPTGDAVSTAAR
Trigger: GCGAGCGGCAGTGGAGACAGCGTCACCCGTCGGAGCGTGGCATCACAGTTTTTCACTCAAGAGGAGGGGCCGGGCATCGATGGCATGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593959.1
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601600.1
ENST00000602061.5
CDS GCA 90 bp TGCAGGAACTCAGCTGTGATGTCCGTGTCTGACTGGCCGGAGATCTaGGCTGAGGCCTTCGAGGTCCCCGACGGGCCTGGCTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: CRNSAVMSVSDWPEI*AEAFEVPDGPGSKS
Trigger: AGACTTGGAGCCAGGCCCGTCGGGGACCTCGAAGGCCTCAGCGCAGATCTCCGGCCAGTCAGACACGGACATCACAGCTGAGTTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 90 bp GGACAGGAGGGTGCAGGGTCAGCCCCCTCACCCATCCTTCTGGTCTaGTTTCTCCTGCAGGCCAGACAACAGGCGGATGAGGCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: GQEGAGSAPSPILLV*FLLQARQQADEAVL
Trigger: GAGGACTGCCTCATCCGCCTGTTGTCTGGCCTGCAGGAGAAACCAGACCAGAAGGATGGGTGAGGGGGCTGACCCTGCACCCTCCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS CCA 90 bp AGCACAACCTTGGTGAAGATCCTGCCAGAGATGGAGGGAGGGCCATaGCTGCAGAGGAAGAGGCCGCCTGGCTCCCGGGCCCTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: STTLVKILPEMEGGP*LQRKRPPGSRALLN
Trigger: ATTCAGCAGGGCCCGGGAGCCAGGCGGCCTCTTCCTCTGCAGCCATGGCCCTCCCTCCATCTCTGGCAGGATCTTCACCAAGGTTGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS-3UTR CAA 90 bp TCCTTGGGTAGGGGGCCCTCGAGACTAGAGTCCAACAGCGCGGCCTCGGTCAGCAGACGGAAAATTTTCTaGCGCCCACCAGCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: SLGRGPSRLESNSAASVSRRKIF*RPPAPA
Trigger: GGCAGGCGCTGGTGGGCGCAAGAAAATTTTCCGTCT...GCTGACCGAGGCCGCGCTGTTGGACTCTAGTCTCGAGGGCCCCCTACCCAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGAGGCAGTCCTCATACTaGTCCAGGGAGCCCGAGGCA +
Preference number: 5 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKRQSSY*SREPEA
Trigger: TGCCTCGGGCTCCCTGGACAAGTATGAGGACTGCCT...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGTCATCCTCGCAGTACTaGCGGACCACCTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKSSSQY*RTTSRA
Trigger: TGCCCTGGAGGTGGTCCGCAAGTACTGCGAGGATGA...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCATGGCGGGACGGGCGCTaGAAGATCAGGTCTCGAAGT +
Preference number: 5 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPWRDGR*KIRSRS
Trigger: ACTTCGAGACCTGATCTTCAAGCGCCCGTCCCGCCA...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCGCCTGGGAGCGCACCTaGTCCTTCTCATGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVAWERT*SFSWEL
Trigger: CAGCTCCCATGAGAAGGACAAGGTGCGCTCCCAGGC...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAGTGCCCAGCAGGCGGTaGAAGACTTCCTTCACCACG +
Preference number: 5 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPVPSRR*KTSFTT
Trigger: CGTGGTGAAGGAAGTCTTCAACCGCCTGCTGGGCAC...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GTGCGAGGGTCTGGGGGCTCCGCTCCTCCTTCAAGGTCAGCCCGCCCGCTGCCGCACAGGTTGGTGGCTTaGATGATGGATTTCATGTCG +
Preference number: 5 (lower is better)
Translates to: VRGSGGSAPPSRSARPLPHRLVA*MMDFMS
Trigger: CGACATGAAATCCATCATCAAAGCCACCAACCTGTG...CGGCAGCGGGCGGGCTGACCTTGAAGGAGGAGCGGAGCCCCCAGACCCTCGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp CCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCAAGCCCTCCCACACCTaGGGGTACTTCCACACCTGC +
Preference number: 5 (lower is better)
Translates to: PESSSMLMKMPGVSHSGPKPSHT*GYFHTC
Trigger: GCAGGTGTGGAAGTACCCCAAGGTGTGGGAGGGCTT...GGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS-3UTR CAA 90 bp GGTCAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCGTGCGCTGGCAGCACTaGATGAAGCCCTCCCACACC +
Preference number: 5 (lower is better)
Translates to: GQPRVVIHADEDARGLALVRWQH*MKPSHT
Trigger: GGTGTGGGAGGGCTTCATCAAGTGCTGCCAGCGCAC...GAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596824.1
ENST00000600237.5
CDS TCA 90 bp AACCCACCACCGAGATGGCTTGGCCCTGGGCTGACAGGCGCCGCTTaGTCAGGACGCTCTCTGTCTTCACCACCTTCTCCTCCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: NPPPRWLGPGLTGAA*SGRSLSSPPSPPWA
Trigger: AGCCCAAGGAGGAGAAGGTGGTGAAGACAGAGAGCGTCCTGATCAAGCGGCGCCTGTCAGCCCAGGGCCAAGCCATCTCGGTGGTGGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS TCA 90 bp CATGGAGCTCAGGGAACCCACCACCGAGATGGCTTGGCCCTGGGCTaGCAGGCGCCGCTTGATCAGGACGCTCTCTGTCTTCACCACCTT +
Preference number: 5 (lower is better)
Translates to: HGAQGTHHRDGLALG*QAPLDQDALCLHHL
Trigger: AAGGTGGTGAAGACAGAGAGCGTCCTGATCAAGCGGCGCCTGTCAGCCCAGGGCCAAGCCATCTCGGTGGTGGGTTCCCTGAGCTCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 90 bp GAGTCATTGGTGATCAGCGCCGCCTGGTTCAGAAGATCCACCACCTaGAAGGAGGGGGAGTGGCAGGGGATAGTGCCAGCCCAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: ESLVISAAWFRRSTT*KEGEWQGIVPAQSS
Trigger: GCTGGACTGGGCTGGCACTATCCCCTGCCACTCCCCCTCCTTCCAGGTGGTGGATCTTCTGAACCAGGCGGCGCTGATCACCAATGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593959.1
CDS-3UTR CAA 90 bp GACGGAGAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCATCTCATCCAGGAAGTaGTCCAGTAGTGTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: DGEGEGEEEEGAPTPPGFISSRK*SSSVGS
Trigger: AGACCCCACACTACTGGACAACTTCCTGGATGAGAT...GAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTCTCCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp TCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCTCCTCCAGGCCCTCCACAAACTaGATGGCGTGGGTGCGGATG +
Preference number: 5 (lower is better)
Translates to: SSSMLMKMPGVSHSGPSSRPSTN*MAWVRM
Trigger: CATCCGCACCCACGCCATCAAGTTTGTGGAGGGCCT...GGAGGAGGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTAGCGCTGTGGTCAGGTaGATGGAGGAGATGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVSAVVR*MEEMAG
Trigger: CCCTGCCATCTCCTCCATCAACCTGACCACAGCGCT...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTTCGTCCTCCCCCAGGTaGGGCTCCAGCTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVSSSPR*GSSFIF
Trigger: GAAGATGAAGCTGGAGCCCAACCTGGGGGAGGACGA...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GGTCAGCCCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCGCCTTCAGGCCCGAGTaGAACTGTGTCACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GQPRVVIHADEDARGLALAFRPE*NCVTRL
Trigger: CAGCCTGGTGACACAGTTCAACTCGGGCCTGAAGGC...GAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGGGCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTCTCAGCACCGTCCGCTaGATGTCGGCGATGGCTTCA +
Preference number: 5 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVLSTVR*MSAMAS
Trigger: TGAAGCCATCGCCGACATCAAGCGGACGGTGCTGAG...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGCATCTGGGATATGCTTaGGACTGGGCACCACAGCAA +
Preference number: 5 (lower is better)
Translates to: APRQGQVVTGPACSATPRHLGYA*DWAPQQ
Trigger: TTGCTGTGGTGCCCAGTCCAAAGCATATCCCAGATG...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CAA 90 bp GAGGGAGAGGGGGAGGAAGAGGAGGGGGCTCCCACTCCTCCCGGCTTCAGCTTCCATCTGGGATATGCTTaGGACTGGGCACCACAGCAA +
Preference number: 5 (lower is better)
Translates to: EGEGEEEEGAPTPPGFSFHLGYA*DWAPQQ
Trigger: TTGCTGTGGTGCCCAGTCCAAAGCATATCCCAGATG...GAAGCTGAAGCCGGGAGGAGTGGGAGCCCCCTCCTCTTCCTCCCCCTCTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp TCCTTGGGTAGGGGGCCCTCGAGACTAGAGTCCAACAGCGCGGCCTCGGTCAGCATGGGCTGGGCTGGATaGTCACCCGAACACCTACAA +
Preference number: 5 (lower is better)
Translates to: SLGRGPSRLESNSAASVSMGWAG*SPEHLQ
Trigger: TTGTAGGTGTTCGGGTGACAATCCAGCCCAGCCCAT...GCTGACCGAGGCCGCGCTGTTGGACTCTAGTCTCGAGGGCCCCCTACCCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS TCA 90 bp CATCCTTCTGGTCTGGTTTCTCCTGCAGGCCAGACAACAGGCGGATaGGGCAGTCCTCATACTTGTCCAGGGAGCCCGAGGCACCTGCGG +
Preference number: 5 (lower is better)
Translates to: HPSGLVSPAGQTTGG*GSPHTCPGSPRHLR
Trigger: CCGCAGGTGCCTCGGGCTCCCTGGACAAGTATGAGGACTGCCTCATCCGCCTGTTGTCTGGCCTGCAGGAGAAACCAGACCAGAAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000599460.5
ENST00000599814.5
CDS TCA 90 bp CTATGCTTCCTCACTCCAAGCCCTACCCGCCACGCTCACCCTCTCTaGGGTGGTCATGCCATCGATGCCCGGCCCCTCCTCTTGAGTGAA +
Preference number: 5 (lower is better)
Translates to: LCFLTPSPTRHAHPL*GGHAIDARPLLLSE
Trigger: TTCACTCAAGAGGAGGGGCCGGGCATCGATGGCATGACCACCTCAGAGAGGGTGAGCGTGGCGGGTAGGGCTTGGAGTGAGGAAGCATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593959.1
CDS TCA 90 bp GAGGGAGGGAGGGAGGTGGCTCTCCAGAGCTCTGAGGTGGGGCTGTaGGTGACAGTCTTTGACTTGGCAGATTCCAGTGGGGGCATGTGG +
Preference number: 5 (lower is better)
Translates to: EGGREVALQSSEVGL*VTVFDLADSSGGMW
Trigger: CCACATGCCCCCACTGGAATCTGCCAAGTCAAAGACTGTCACTCACAGCCCCACCTCAGAGCTCTGGAGAGCCACCTCCCTCCCTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS GCA 90 bp CACGCTCCGACGGGTGACGCTGTCTCCACTGCCGCTCGCCATGGCTaGTGTCAGCTTGTCCCCAGGAAAGAAGAGGATGGATCAAGCTCA +
Preference number: 5 (lower is better)
Translates to: HAPTGDAVSTAARHG*CQLVPRKEEDGSSS
Trigger: TGAGCTTGATCCATCCTCTTCTTTCCTGGGGACAAGCTGACAGCAGCCATGGCGAGCGGCAGTGGAGACAGCGTCACCCGTCGGAGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598059.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 90 bp TCCCCAGGAAAGAAGAGGATGGATCAAGCTCAGGGAACCAGCGGATaGGCTGGGCTGGATTGTCACCCGAACACCGCAGCTCTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SPGKKRMDQAQGTSG*AGLDCHPNTAALAS
Trigger: GGAGGCCAGAGCTGCGGTGTTCGGGTGACAATCCAGCCCAGCCCATCCGCTGGTTCCCTGAGCTTGATCCATCCTCTTCTTTCCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598059.5
CDS-3UTR CAA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGGTGATCTTTGAGTCATaGGTGATCAGCGCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKVIFES*VISAAW
Trigger: CCAGGCGGCGCTGATCACCAATGACTCAAAGATCAC...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGAGTAGTGTGGGGTCTTaGTTGATGATCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: APRQGQVVTGPACSATPRSSVGS*LMISSW
Trigger: CCAGGAGCTGATCATCAACAAAGACCCCACACTACT...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGCGCACTTCGATTGACTaGTCTGCTTGGAATGCGATG +
Preference number: 5 (lower is better)
Translates to: APRQGQVVTGPACSATPRRTSID*SAWNAM
Trigger: CATCGCATTCCAAGCAGACAAGTCAATCGAAGTGCG...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAGTGCGGATGCCGTCATaGTCAGAGTCCAATAGCAGG +
Preference number: 5 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPVRMPS*SESNSR
Trigger: CCTGCTATTGGACTCTGACAATGACGGCATCCGCAC...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCCTGCTCACCTGCGATTaGGCCAGCGTCGGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLLLTCD*ASVGGR
Trigger: CCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAG...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCCGCTTGCGGGTGTCCTaGCTGCTCGGCATGTTGCGG +
Preference number: 5 (lower is better)
Translates to: KKQGQIPTSACETPVWAGRLRVS*LLGMLR
Trigger: CCGCAACATGCCGAGCAGCAAGGACACCCGCAAGCG...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GGTGGGCGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATCCAGCTTCATCTTCTaGAGTGTGGAGTCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: GGRSQGRWSLDAEPAELGSSFIF*SVESES
Trigger: TGACTCGGACTCCACACTCAAGAAGATGAAGCTGGA...TCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGAGACGGAAAATTTTCTaGCGCCCACCAGCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMRRKIF*RPPAPA
Trigger: GGCAGGCGCTGGTGGGCGCAAGAAAATTTTCCGTCT...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CTTCGTCCCCTAGGTCCAGAACCAGCCAGCAAGCACCTCCCTCGGTCCCTGCAGGCCACCTCTGTGTCCTaGTCAGCTCCAAACAGCACA +
Preference number: 5 (lower is better)
Translates to: LRPLGPEPASKHLPRSLQATSVS*SAPNST
Trigger: TGTGCTGTTTGGAGCTGACAAGGACACAGAGGTGGC...CTGCAGGGACCGAGGGAGGTGCTTGCTGGCTGGTTCTGGACCTAGGGGACGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CGGAGTCAATGTTGTGTAATGCGATCAGGAGCTCTCCAGGGTTCAGCGGGGACACGTCAGCTGTTCCCCTaGGCCTCGGGTTCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: RSQCCVMRSGALQGSAGTRQLFP*ASGSLA
Trigger: CGCCAGGGAACCCGAGGCCAAGGGGAACAGCTGACG...TGTCCCCGCTGAACCCTGGAGAGCTCCTGATCGCATTACACAACATTGACTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTGGAGAAAAACTTGGGTaGGGTGCTGGGGACACCAGC +
Preference number: 5 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVGEKLG*GAGDTS
Trigger: GCTGGTGTCCCCAGCACCCAACCCAAGTTTTTCTCC...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGGAGCAGGAGAAAAACTaGGGTTGGGTGCTGGGGACA +
Preference number: 5 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKEQEKN*GWVLGT
Trigger: TGTCCCCAGCACCCAACCCAAGTTTTTCTCCTGCTC...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS TCA 90 bp ACCCTCTCTGAGGTGGTCATGCCATCGATGCCCGGCCCCTCCTCTTaGGTGAAAAACTGTGATGCCACGCTCCGACGGGTGACGCTGTCT +
Preference number: 5 (lower is better)
Translates to: TLSEVVMPSMPGPSS*VKNCDATLRRVTLS
Trigger: AGACAGCGTCACCCGTCGGAGCGTGGCATCACAGTTTTTCACTCAAGAGGAGGGGCCGGGCATCGATGGCATGACCACCTCAGAGAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593959.1
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601600.1
ENST00000602061.5
CDS TCA 90 bp TGGCGTGGGTGCGGATGCCGTCATTGTCAGAGTCCAATAGCAGGATaGTGTCCCCCGCCATGGCAGATACCATGTCCCAGCAGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: WRGCGCRHCQSPIAG*CPPPWQIPCPSRPP
Trigger: AGGAGGCCTGCTGGGACATGGTATCTGCCATGGCGGGGGACATCATCCTGCTATTGGACTCTGACAATGACGGCATCCGCACCCACGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS TCA 90 bp GGTCGAGGAGGACATGCAGGTACTGGAACTGGCGGGACGGGCGCTTaGAGATCAGGTCTCGAAGTGTGGACATGCCCAGATAGGTGCGAC +
Preference number: 5 (lower is better)
Translates to: GRGGHAGTGTGGTGA*RSGLEVWTCPDRCD
Trigger: GTCGCACCTATCTGGGCATGTCCACACTTCGAGACCTGATCTTCAAGCGCCCGTCCCGCCAGTTCCAGTACCTGCATGTCCTCCTCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS GCA 90 bp GAGCGCACCTTGTCCTTCTCATGGGAGCTGAGGTCGAGGAGGACATaGAGGTACTGGAACTGGCGGGACGGGCGCTTGAAGATCAGGTCT +
Preference number: 5 (lower is better)
Translates to: ERTLSFSWELRSRRT*RYWNWRDGRLKIRS
Trigger: AGACCTGATCTTCAAGCGCCCGTCCCGCCAGTTCCAGTACCTGCATGTCCTCCTCGACCTCAGCTCCCATGAGAAGGACAAGGTGCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS GCA 90 bp GTGCAGGGTCAGCCCCCTCACCCATCCTTCTGGTCTGGTTTCTCCTaGAGGCCAGACAACAGGCGGATGAGGCAGTCCTCATACTTGTCC +
Preference number: 5 (lower is better)
Translates to: VQGQPPHPSFWSGFS*RPDNRRMRQSSYLS
Trigger: GGACAAGTATGAGGACTGCCTCATCCGCCTGTTGTCTGGCCTGCAGGAGAAACCAGACCAGAAGGATGGGTGAGGGGGCTGACCCTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS GCA 90 bp ACACTCAACAGGTGCAGCTTCAGATTCTTACGCACACTGCTCACCTaGGATTTGGCCAGCGTCGGGGGCAGGTTGGCTGGGGCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: TLNRCSFRFLRTLLT*DLASVGGRLAGASE
Trigger: CTCACTGGCCCCAGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCTGTTGAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593899.5
CDS GCA 90 bp GCTTCAGCACACTCAACAGGTGCAGCTTCAGATTCTTACGCACACTaGTCACCTGCGATTTGGCCAGCGTCGGGGGCAGGTTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: ASAHSTGAASDSYAH*SPAIWPASGAGWLG
Trigger: CCCCAGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCTGTTGAGTGTGCTGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593899.5
CDS CCA 90 bp CGCTCGCCATGGCTGCTGTCAGCTTGTCCCCAGGAAAGAAGAGGATaGATCAAGCTCAGGGAACCAGCGGATGGGCTGGGCTGGATTGTC +
Preference number: 5 (lower is better)
Translates to: RSPWLLSACPQERRG*IKLREPADGLGWIV
Trigger: GACAATCCAGCCCAGCCCATCCGCTGGTTCCCTGAGCTTGATCCATCCTCTTCTTTCCTGGGGACAAGCTGACAGCAGCCATGGCGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598059.5
ENST00000599814.5
ENST00000600237.5
CDS-3UTR CAA 90 bp GAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCTCCGTGATCTTTGAGTCATaGGTGATCAGCGCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: ESSSMLMKMPGVSHSGPSVIFES*VISAAW
Trigger: CCAGGCGGCGCTGATCACCAATGACTCAAAGATCAC...GGAGGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCAAGTGTGGGGTCTTTGTaGATGATCAGCTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPSVGSL*MISSWT
Trigger: GGTCCAGGAGCTGATCATCAACAAAGACCCCACACT...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GGAAGCGGACGTCTGGCAGTCGCTTGTGGTAGAGATCCCGGACCCGCTTCACCAGTGCGGATGCCGTCATaGTCAGAGTCCAATAGCAGG +
Preference number: 5 (lower is better)
Translates to: GSGRLAVACGRDPGPASPVRMPS*SESNSR
Trigger: CCTGCTATTGGACTCTGACAATGACGGCATCCGCAC...TGGTGAAGCGGGTCCGGGATCTCTACCACAAGCGACTGCCAGACGTCCGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCTCCTTGGGCTCCTCCTaGCACTGTTTGGTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVSLGSS*HCLVCS
Trigger: AGAGCAGACCAAACAGTGCAAGGAGGAGCCCAAGGA...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GACAGGGCTAGGGCTGTCTTTCCTGTGTCCCCAGCACTACCCAGGATGGATATGGCTGACAGGCGCCGCTaGATCAGGACGCTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: DRARAVFPVSPALPRMDMADRRR*IRTLSV
Trigger: GACAGAGAGCGTCCTGATCAAGCGGCGCCTGTCAGC...CATATCCATCCTGGGTAGTGCTGGGGACACAGGAAAGACAGCCCTAGCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCGCTGACAGGCGCCGCTaGATCAGGACGCTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: KKQGQIPTSACETPVWAGADRRR*IRTLSV
Trigger: GACAGAGAGCGTCCTGATCAAGCGGCGCCTGTCAGC...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGCCTTCAGGCCCGAGTaGAACTGTGTCACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLAFRPE*NCVTRL
Trigger: CAGCCTGGTGACACAGTTCAACTCGGGCCTGAAGGC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATGCCCATTCCTCGGTCATCCTCGCAGTACTaGCGGACCACCTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: GQFSTSRSSSGEFMPIPRSSSQY*RTTSRA
Trigger: TGCCCTGGAGGTGGTCCGCAAGTACTGCGAGGATGA...CCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp GCTGAGTTTCCCTCACCATGCTGGGTGCCCAGCAGGCGGTTGAAGACTTCCTTCCTCAGCACCGTCCGCTaGATGTCGGCGATGGCTTCA +
Preference number: 5 (lower is better)
Translates to: AEFPSPCWVPSRRLKTSFLSTVR*MSAMAS
Trigger: TGAAGCCATCGCCGACATCAAGCGGACGGTGCTGAG...GAAGGAAGTCTTCAACCGCCTGCTGGGCACCCAGCATGGTGAGGGAAACTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTTTCTTCTCCAGCCCATaGAGCACCGGGATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVFFSSP*STGMRK
Trigger: CTTCCTCATCCCGGTGCTCAATGGGCTGGAGAAGAA...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCGTGCCCAGCAGGCGGTaGAAGACTTCCTTCACCACG +
Preference number: 5 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLVPSRR*KTSFTT
Trigger: CGTGGTGAAGGAAGTCTTCAACCGCCTGCTGGGCAC...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GCTCCTCGTCAGGGCCAGGTGGTCACTGGTCCTGCCTGCTCAGCCACCCCAAGGTTCACGGAGTCAATGTaGTGTAATGCGATCAGGAGC +
Preference number: 5 (lower is better)
Translates to: APRQGQVVTGPACSATPRFTESM*CNAIRS
Trigger: GCTCCTGATCGCATTACACAACATTGACTCCGTGAA...CCTTGGGGTGGCTGAGCAGGCAGGACCAGTGACCACCTGGCCCTGACGAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GCTGAGTTTCCCTCACCATGCTGGGTGCCCAGCAGGCGGTTGAAGACTTCCTTCCACGGGGCCTGTAACTaGGGGGAGACTGACATCTCC +
Preference number: 5 (lower is better)
Translates to: AEFPSPCWVPSRRLKTSFHGACN*GETDIS
Trigger: GGAGATGTCAGTCTCCCCCAAGTTACAGGCCCCGTG...GAAGGAAGTCTTCAACCGCCTGCTGGGCACCCAGCATGGTGAGGGAAACTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGGTGACAGTCTTTGACTaGGCAGATTCCAGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMVTVFD*ADSSGG
Trigger: GCCCCCACTGGAATCTGCCAAGTCAAAGACTGTCAC...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGGAGCAGGAGAAAAACTaGGGTTGGGTGCTGGGGACA +
Preference number: 5 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMEQEKN*GWVLGT
Trigger: TGTCCCCAGCACCCAACCCAAGTTTTTCTCCTGCTC...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS TCA 90 bp CGTTGTACTGGATGTAGGGGTGGTCACGAGGGATGCGGTCCAGGCTaGTATCATGCTCCTGGCGTCGGGGTATCTCTGAGTCAGCCATGC +
Preference number: 5 (lower is better)
Translates to: RCTGCRGGHEGCGPG*YHAPGVGVSLSQPC
Trigger: GCATGGCTGACTCAGAGATACCCCGACGCCAGGAGCATGATATCAGCCTGGACCGCATCCCTCGTGACCACCCCTACATCCAGTACAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS TCA 90 bp CACTGCTCACCTGCGATTTGGCCAGCGTCGGGGGCAGGTTGGCTGTaGGGAAAGTGGCAGGAGCTGTGTCTTGTGGAAGATCTCATGGCA +
Preference number: 5 (lower is better)
Translates to: HCSPAIWPASGAGWL*GKWQELCLVEDLMA
Trigger: TGCCATGAGATCTTCCACAAGACACAGCTCCTGCCACTTTCCTCACAGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601582.1
CDS TCA 90 bp CCTCAAGTGGGCCAACCACAAACAGCTGCTGAACGATGGGCCACATaGACGTGCAACAGCCACCTTGCAGGTCTCCGTGTGTCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: PQVGQPQTAAERWAT*TCNSHLAGLRVSPL
Trigger: GAGAGGGGACACACGGAGACCTGCAAGGTGGCTGTTGCACGTTCATGTGGCCCATCGTTCAGCAGCTGTTTGTGGTTGGCCCACTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS GCA 90 bp GCTTCAGCACACTCAACAGGTGCAGCTTCAGATTCTTACGCACACTaGTCACCTGCGATTTGGCCAGCGTCGGGGGCAGGTTGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: ASAHSTGAASDSYAH*SPAIWPASGAGWPL
Trigger: GAGAGGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCTGTTGAGTGTGCTGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596518.1
CDS GCA 90 bp CCTTGGGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATaGCCATTCCTCGGATCTTGGCATCTCCCTGCAGCTCCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: PWDNFPPAGAAPGSS*PFLGSWHLPAAPPD
Trigger: GTCTGGAGGAGCTGCAGGGAGATGCCAAGATCCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598155.5
CDS CCA 90 bp CTCGCAGTACTTGCGGACCACCTCCAGGGCACTCTCTGTGATGAGTaGCGCCTCCAGCACAACCTTGGTGAAGATCCCATCCTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: LAVLADHLQGTLCDE*RLQHNLGEDPILLV
Trigger: GACCAGAAGGATGGGATCTTCACCAAGGTTGTGCTGGAGGCGCCACTCATCACAGAGAGTGCCCTGGAGGTGGTCCGCAAGTACTGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245934.12
ENST00000599460.5
ENST00000599814.5
CDS CCA 90 bp CTCGCAGTACTTGCGGACCACCTCCAGGGCACTCTCTGTGATGAGTaGCGCCTCCAGCACAACCTTGGTGAAGATCCTGCCAGAGATGGA +
Preference number: 5 (lower is better)
Translates to: LAVLADHLQGTLCDE*RLQHNLGEDPARDG
Trigger: TCCATCTCTGGCAGGATCTTCACCAAGGTTGTGCTGGAGGCGCCACTCATCACAGAGAGTGCCCTGGAGGTGGTCCGCAAGTACTGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS CCA 90 bp AGAAGAGGATGGATCAAGCTCAGGGAACCAGCGGATGGGCTGGGCTaGATTGTCACCCGAACACCTACAAAGGGCCCAAGCCTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: RRGWIKLREPADGLG*IVTRTPTKGPSLLP
Trigger: GGGAAGGAGGCTTGGGCCCTTTGTAGGTGTTCGGGTGACAATCCAGCCCAGCCCATCCGCTGGTTCCCTGAGCTTGATCCATCCTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS-3UTR CAA 90 bp ACCTGCCAGAAACCGAGGAAGCCCCTGCTCCTCGTCAGGGCCAGGTGGTCACTGAGCTCCTGGACCTGTTaGAGCACTGTGATCTTTGAG +
Preference number: 5 (lower is better)
Translates to: TCQKPRKPLLLVRARWSLSSWTC*STVIFE
Trigger: CTCAAAGATCACAGTGCTCAAACAGGTCCAGGAGCT...CAGTGACCACCTGGCCCTGACGAGGAGCAGGGGCTTCCTCGGTTTCTGGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGAGTGTGGGGTCTTTGTaGATGATCAGCTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMSVGSL*MISSWT
Trigger: GGTCCAGGAGCTGATCATCAACAAAGACCCCACACT...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp ACACCAGCTGGAGGGTTGTCTGGCCTGCAGCGTGCACGCCTGGGCGTGTTGAAGCGCACTTCGATTGACTaGTCTGCTTGGAATGCGATG +
Preference number: 5 (lower is better)
Translates to: TPAGGLSGLQRARLGVLKRTSID*SAWNAM
Trigger: CATCGCATTCCAAGCAGACAAGTCAATCGAAGTGCG...CTTCAACACGCCCAGGCGTGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCAGGCCCTCCACAAACTaGATGGCGTGGGTGCGGATG +
Preference number: 5 (lower is better)
Translates to: KKQGQIPTSACETPVWAGRPSTN*MAWVRM
Trigger: CATCCGCACCCACGCCATCAAGTTTGTGGAGGGCCT...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAATCATCCTCGCAGTACTaGCGGACCACCTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQSSSQY*RTTSRA
Trigger: TGCCCTGGAGGTGGTCCGCAAGTACTGCGAGGATGA...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATAGCACAGACGGTGGGTaGGGGTGCACCAGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNSTDGG*GCTRSC
Trigger: GCAGCTCCTGGTGCACCCCAACCCACCGTCTGTGCT...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTACGATGGGGTTGAGTTaGATGAGTTTAGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVTMGLS*MSLGRA
Trigger: GGCCCTGCCTAAACTCATCAAACTCAACCCCATCGT...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAACACGGGGCCTGTAACTaGGGGGAGACTGACATCTCC +
Preference number: 5 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQHGACN*GETDIS
Trigger: GGAGATGTCAGTCTCCCCCAAGTTACAGGCCCCGTG...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CAA 90 bp TGTCTCTGCTCCCTTGGGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTGCCTCCAGCACAACCTaGGTGAAGATCCTGCGGCCA +
Preference number: 5 (lower is better)
Translates to: CLCSLGTIFHQQEQLRGVASSTT*VKILRP
Trigger: TGGCCGCAGGATCTTCACCAAGGTTGTGCTGGAGGC...AACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCCCAAGGGAGCAGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp TTTCCCAATGGCGACAGCCTGACCTCCTCCCTTGACCAGGCCCCCTCCTTCGTCCCACTTAGCTTCTGCTaGGCCCTGAGTAAGTCACCT +
Preference number: 5 (lower is better)
Translates to: FPNGDSLTSSLDQAPSFVPLSFC*ALSKSP
Trigger: AGGTGACTTACTCAGGGCCAAGCAGAAGCTAAGTGG...GACGAAGGAGGGGGCCTGGTCAAGGGAGGAGGTCAGGCTGTCGCCATTGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGCCACTTAGCTTCTGCTaGGCCCTGAGTAAGTCACCT +
Preference number: 5 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMPLSFC*ALSKSP
Trigger: AGGTGACTTACTCAGGGCCAAGCAGAAGCTAAGTGG...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS GCA 90 bp GCTTCAGCACACTCAACAGGTGCAGCTTCAGATTCTTACGCACACTaGTCACCTGCGATTTGGCCAGCGTCGGGGGCAGGTTGGCATGCA +
Preference number: 5 (lower is better)
Translates to: ASAHSTGAASDSYAH*SPAIWPASGAGWHA
Trigger: TGCATGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCTGTTGAGTGTGCTGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS GCA 90 bp CCTTGGGACAATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATaGCCATTCCTCGGATCTAGAGGCAGAGACAGGGATGACCAGACC +
Preference number: 5 (lower is better)
Translates to: PWDNFPPAGAAPGSS*PFLGSRGRDRDDQT
Trigger: GGTCTGGTCATCCCTGTCTCTGCCTCTAGATCCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATTGTCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598329.2
CDS CCA 90 bp TTCTCATGGGAGCTGAGGTCGAGGAGGACATGCAGGTACTGGAACTaGCGGGACGGGCGCTTGAAGATCAGGTCTCGAAGTGTGGACATG +
Preference number: 5 (lower is better)
Translates to: FSWELRSRRTCRYWN*RDGRLKIRSRSVDM
Trigger: CATGTCCACACTTCGAGACCTGATCTTCAAGCGCCCGTCCCGCCAGTTCCAGTACCTGCATGTCCTCCTCGACCTCAGCTCCCATGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 90 bp TTGTCCTTCTCATGGGAGCTGAGGTCGAGGAGGACATGCAGGTACTaGAACTGGCGGGACGGGCGCTTGAAGATCAGGTCTCGAAGTGTG +
Preference number: 5 (lower is better)
Translates to: LSFSWELRSRRTCRY*NWRDGRLKIRSRSV
Trigger: CACACTTCGAGACCTGATCTTCAAGCGCCCGTCCCGCCAGTTCCAGTACCTGCATGTCCTCCTCGACCTCAGCTCCCATGAGAAGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 90 bp AGGAAAGAAGAGGATGGATCAAGCTCAGGGAACCAGCGGATGGGCTaGGCTGGATTGTCACCCGAACACCTACAAAGGGCCCAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: RKEEDGSSSGNQRMG*AGLSPEHLQRAQAS
Trigger: GGAGGCTTGGGCCCTTTGTAGGTGTTCGGGTGACAATCCAGCCCAGCCCATCCGCTGGTTCCCTGAGCTTGATCCATCCTCTTCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS CCA 90 bp TCCCCAGGAAAGAAGAGGATGGATCAAGCTCAGGGAACCAGCGGATaGGCTGGGCTGGATTGTCACCCGAACACCTACAAAGGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: SPGKKRMDQAQGTSG*AGLDCHPNTYKGPK
Trigger: CTTGGGCCCTTTGTAGGTGTTCGGGTGACAATCCAGCCCAGCCCATCCGCTGGTTCCCTGAGCTTGATCCATCCTCTTCTTTCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS-3UTR CAA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTAGCTCCTGGACCTGTTaGAGCACTGTGATCTTTGAG +
Preference number: 5 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVSSWTC*STVIFE
Trigger: CTCAAAGATCACAGTGCTCAAACAGGTCCAGGAGCT...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TGTACACGGCCGCCAGTTCGTGGATCAGCTTGTGGTTCTGAGGCAGGAGGGCCAAGTGTGGGGTCTTTGTaGATGATCAGCTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: CTRPPVRGSACGSEAGGPSVGSL*MISSWT
Trigger: GGTCCAGGAGCTGATCATCAACAAAGACCCCACACT...TGGCCCTCCTGCCTCAGAACCACAAGCTGATCCACGAACTGGCGGCCGTGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp GAGACTAGAGTCCAACAGCGCGGCCTCGGTCAGCCCCGAGTCGTCATCCATGCTAGTAGTGTGGGGTCTTaGTTGATGATCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ETRVQQRGLGQPRVVIHASSVGS*LMISSW
Trigger: CCAGGAGCTGATCATCAACAAAGACCCCACACTACT...AGCATGGATGACGACTCGGGGCTGACCGAGGCCGCGCTGTTGGACTCTAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp TCCTTGGGTAGGGGGCCCTCGAGACTAGAGTCCAACAGCGCGGCCTCGGTCAGCTCCCTCAAGAGCATGTaGAGGTTTGCAATGAGTTTC +
Preference number: 5 (lower is better)
Translates to: SLGRGPSRLESNSAASVSSLKSM*RFAMSF
Trigger: GAAACTCATTGCAAACCTCAACATGCTCTTGAGGGA...GCTGACCGAGGCCGCGCTGTTGGACTCTAGTCTCGAGGGCCCCCTACCCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp TCTGACGTGTACACGTTCCGCTCCGCAAAGCACAGGTTGGTGGCTTTGATGATGGCTGACAGGCGCCGCTaGATCAGGACGCTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: SDVYTFRSAKHRLVALMMADRRR*IRTLSV
Trigger: GACAGAGAGCGTCCTGATCAAGCGGCGCCTGTCAGC...CATCATCAAAGCCACCAACCTGTGCTTTGCGGAGCGGAACGTGTACACGTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATTGGCGGGACGGGCGCTaGAAGATCAGGTCTCGAAGT +
Preference number: 5 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYWRDGR*KIRSRS
Trigger: ACTTCGAGACCTGATCTTCAAGCGCCCGTCCCGCCA...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCCTCAGCACCGTCCGCTaGATGTCGGCGATGGCTTCA +
Preference number: 5 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLLSTVR*MSAMAS
Trigger: TGAAGCCATCGCCGACATCAAGCGGACGGTGCTGAG...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CGCTCTCAGGGGAGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCATTCACCACGATGGGGTaGAGTTTGATGAGTTTAGGC +
Preference number: 5 (lower is better)
Translates to: RSQGRWSLDAEPAELGFPFTTMG*SLMSLG
Trigger: GCCTAAACTCATCAAACTCAACCCCATCGTGGTGAA...TGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCTCCCCTGAGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CCCGAGTCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCTTCACGGAGTCAATGTaGTGTAATGCGATCAGGAGC +
Preference number: 5 (lower is better)
Translates to: PESSSMLMKMPGVSHSGPFTESM*CNAIRS
Trigger: GCTCCTGATCGCATTACACAACATTGACTCCGTGAA...GGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGACTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp TCGTCATCCATGCTGATGAAGATGCCCGGGGTCTCGCACTCAGGCCCCTCCTCCTCCGCAAAGCACAGGTaGGTGGCTTTGATGATGGAT +
Preference number: 5 (lower is better)
Translates to: SSSMLMKMPGVSHSGPSSSAKHR*VALMMD
Trigger: ATCCATCATCAAAGCCACCAACCTGTGCTTTGCGGA...GGAGGAGGGGCCTGAGTGCGAGACCCCGGGCATCTTCATCAGCATGGATGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATACACCAGCTGGAGGGTaGTCTGGCCTGCAGCGTGCA +
Preference number: 5 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNTPAGG*SGLQRA
Trigger: TGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS TCA 90 bp GAGCCAGAAGTCTCAGCCTCAAGTGGGCCAACCACAAACAGCTGCTaGACGATGGGCCACATGAACGTGCAACAGCCACCTTGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: EPEVSASSGPTTNSC*TMGHMNVQQPPCRS
Trigger: AGACCTGCAAGGTGGCTGTTGCACGTTCATGTGGCCCATCGTTCAGCAGCTGTTTGTGGTTGGCCCACTTGAGGCTGAGACTTCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS GCA 90 bp GCCTGGAACTCCAAGGAAGCCGGGTGCTTCAGCACACTCAACAGGTaGAGCTTCAGATTCTTACGCACACTGCTCACCTGCGATTTGGCC +
Preference number: 5 (lower is better)
Translates to: AWNSKEAGCFSTLNR*SFRFLRTLLTCDLA
Trigger: GGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCTGTTGAGTGTGCTGAAGCACCCGGCTTCCTTGGAGTTCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000596518.1
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601582.1
CDS GCA 90 bp ACACTCAACAGGTGCAGCTTCAGATTCTTACGCACACTGCTCACCTaGGATTTGGCCAGCGTCGGGGGCAGGTTGGCTGTGAGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: TLNRCSFRFLRTLLT*DLASVGGRLAVRKV
Trigger: CACTTTCCTCACAGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCTGTTGAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601582.1
CDS GCA 90 bp CACGCTCCGACGGGTGACGCTGTCTCCACTGCCGCTCGCCATGGCTaGTGTCAGCTTCATGGAACACACGGTCATAGACATCATAAAACA +
Preference number: 5 (lower is better)
Translates to: HAPTGDAVSTAARHG*CQLHGTHGHRHHKT
Trigger: TGTTTTATGATGTCTATGACCGTGTGTTCCATGAAGCTGACAGCAGCCATGGCGAGCGGCAGTGGAGACAGCGTCACCCGTCGGAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602061.5
CDS CCA 90 bp CGGGGTGACAGGGTGACAATGAGGCCCTCCACAAACTTGATGGCGTaGGTGCGGATGCCGTCATTGTCAGAGTCCAATAGCAGGATGATG +
Preference number: 5 (lower is better)
Translates to: RGDRVTMRPSTNLMA*VRMPSLSESNSRMM
Trigger: CATCATCCTGCTATTGGACTCTGACAATGACGGCATCCGCACCCACGCCATCAAGTTTGTGGAGGGCCTCATTGTCACCCTGTCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 90 bp ACAGGTGCAGCTTCAGATTCTTACGCACACTGCTCACCTGCGATTTaGCCAGCGTCGGGGGCAGGTTGGCATGCAGAGTTTCATAGGCCT +
Preference number: 5 (lower is better)
Translates to: TGAASDSYAHCSPAI*PASGAGWHAEFHRP
Trigger: AGGCCTATGAAACTCTGCATGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 90 bp AGGGTCTGTCTCTGGCTTATGGATATGTGCACGGGGCCTGTAACTTaGGGGAGACTGACATCTCCCAAGGCAGAGCCAGAAGTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: RVCLWLMDMCTGPVT*GRLTSPKAEPEVSA
Trigger: GGCTGAGACTTCTGGCTCTGCCTTGGGAGATGTCAGTCTCCCCCAAGTTACAGGCCCCGTGCACATATCCATAAGCCAGAGACAGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS-3UTR CAA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAGTGCGGATGCCGTCATaGTCAGAGTCCAATAGCAGG +
Preference number: 5 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQVRMPS*SESNSR
Trigger: CCTGCTATTGGACTCTGACAATGACGGCATCCGCAC...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCTTCTTCTCCAGCCCATaGAGCACCGGGATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: KKQGQIPTSACETPVWAGFFSSP*STGMRK
Trigger: CTTCCTCATCCCGGTGCTCAATGGGCTGGAGAAGAA...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CAGCTCCGTGGGACAGGATGGCTCCTGGCCCAGAAACCTTGCTCAGGAGGGATGTTCACGGAGTCAATGTaGTGTAATGCGATCAGGAGC +
Preference number: 5 (lower is better)
Translates to: QLRGTGWLLAQKPCSGGMFTESM*CNAIRS
Trigger: GCTCCTGATCGCATTACACAACATTGACTCCGTGAA...CATCCCTCCTGAGCAAGGTTTCTGGGCCAGGAGCCATCCTGTCCCACGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp AGGTGGTCCTTAGACGCGGAACCGGCAGAGCTGGGATTCCCACCCAGGTCCGTTCGTTTCTCAGAGAACTaGCAGAGGAAGGTTAGGAAG +
Preference number: 5 (lower is better)
Translates to: RWSLDAEPAELGFPPRSVRFSEN*QRKVRK
Trigger: CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACG...AACGGACCTGGGTGGGAATCCCAGCTCTGCCGGTTCCGCGTCTAAGGACCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS GCA 90 bp ACACTCAACAGGTGCAGCTTCAGATTCTTACGCACACTGCTCACCTaGGATTTGGCCAGCGTCGGGGGCAGGTTGGCATGCAGAGTTTCA +
Preference number: 5 (lower is better)
Translates to: TLNRCSFRFLRTLLT*DLASVGGRLACRVS
Trigger: TGAAACTCTGCATGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCTGTTGAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS GCA 90 bp CTGATGAGGACCAGATTAGCCACATTATCAGGCGTCAGCAGAGGCTaGAGGAACTCAGCTGTGATGTCCGTGTCTGACTGGCCGGAGATC +
Preference number: 5 (lower is better)
Translates to: LMRTRLATLSGVSRG*RNSAVMSVSDWPEI
Trigger: GATCTCCGGCCAGTCAGACACGGACATCACAGCTGAGTTCCTGCAGCCTCTGCTGACGCCTGATAATGTGGCTAATCTGGTCCTCATCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 90 bp GAGACTGACATCTCCCAAGGCAGAGCCAGAAGTCTCAGCCTCAAGTaGGCCAACCACAAACAGCTGCTGAACGATGGGCCACATGAACGT +
Preference number: 5 (lower is better)
Translates to: ETDISQGRARSLSLK*ANHKQLLNDGPHER
Trigger: ACGTTCATGTGGCCCATCGTTCAGCAGCTGTTTGTGGTTGGCCCACTTGAGGCTGAGACTTCTGGCTCTGCCTTGGGAGATGTCAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS-3UTR CAA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATTCATCGCGGGGCCGCTaGCGGGTGTCCTTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNSSRGR*RVSLLL
Trigger: GAGCAGCAAGGACACCCGCAAGCGGCCCCGCGATGA...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TTTCGGGAAGTCTTCCCTGATGTCCCACACCCAGGCTGGGTTACATGGCCCCTCTCCAGCTTCATCTTCTaGAGTGTGGAGTCCGAGTCA +
Preference number: 5 (lower is better)
Translates to: FREVFPDVPHPGWVTWPLSSFIF*SVESES
Trigger: TGACTCGGACTCCACACTCAAGAAGATGAAGCTGGA...GAGGGGCCATGTAACCCAGCCTGGGTGTGGGACATCAGGGAAGACTTCCCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATGCCTCCAGCACAACCTaGGTGAAGATCCCATCCTTC +
Preference number: 5 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYASSTT*VKIPSF
Trigger: GAAGGATGGGATCTTCACCAAGGTTGTGCTGGAGGC...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCGCCACCTCTGTGTCCTaGTCAGCTCCAAACAGCACA +
Preference number: 5 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLATSVS*SAPNST
Trigger: TGTGCTGTTTGGAGCTGACAAGGACACAGAGGTGGC...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GACCTGGAAGCTCTGGGGCTTTGTGCGCTGGCAGCACTTGATGAAGCCCTCCCATTCACCACGATGGGGTaGAGTTTGATGAGTTTAGGC +
Preference number: 5 (lower is better)
Translates to: DLEALGLCALAALDEALPFTTMG*SLMSLG
Trigger: GCCTAAACTCATCAAACTCAACCCCATCGTGGTGAA...TGGGAGGGCTTCATCAAGTGCTGCCAGCGCACAAAGCCCCAGAGCTTCCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp CAGATCATCCTCCTCCAAGGGCCCCGCAGGCGCCTCCTTGGCCTCTGGCTCCTGAAGCTGAAGACAGTGTaGACTGTATGTTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: QIILLQGPRRRLLGLWLLKLKTV*TVCFCF
Trigger: AAAACAGAAACATACAGTCAACACTGTCTTCAGCTT...CAGGAGCCAGAGGCCAAGGAGGCGCCTGCGGGGCCCTTGGAGGAGGATGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS-3UTR CAA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATAAGCTCAGACCTGACTaGCCTCCCAGAGACCCTCAA +
Preference number: 5 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYKLRPD*PPRDPQ
Trigger: TTGAGGGTCTCTGGGAGGCAAGTCAGGTCTGAGCTT...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS GCA 90 bp ACACTCAACAGGTGCAGCTTCAGATTCTTACGCACACTGCTCACCTaGGATTTGGCCAGCGTCGGGGGCAGGTTGGCCTCTCTTTTAGTA +
Preference number: 5 (lower is better)
Translates to: TLNRCSFRFLRTLLT*DLASVGGRLASLLV
Trigger: TACTAAAAGAGAGGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCTGTTGAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596518.1
CDS CCA 90 bp CGGGGGCAGGTTGGCTGTGAGGAAAGTGGCAGGAGCTGTGTCTTGTaGAAGATCTCATGGCATGCTGCCAGTCTTAATTCTCAACCCCAA +
Preference number: 5 (lower is better)
Translates to: RGQVGCEESGRSCVL*KISWHAASLNSQPQ
Trigger: TTGGGGTTGAGAATTAAGACTGGCAGCATGCCATGAGATCTTCCACAAGACACAGCTCCTGCCACTTTCCTCACAGCCAACCTGCCCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601582.1
CDS-3UTR CAA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCATCTCATCCAGGAAGTaGTCCAGTAGTGTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: KKQGQIPTSACETPVWAGISSRK*SSSVGS
Trigger: AGACCCCACACTACTGGACAACTTCCTGGATGAGAT...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGTCATCGCGGGGCCGCTaGCGGGTGTCCTTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKSSRGR*RVSLLL
Trigger: GAGCAGCAAGGACACCCGCAAGCGGCCCCGCGATGA...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS GCA 90 bp CTGACTCGGGAGTCAGAGAGAACCTATTCCAGACTTCCTTCTGTCTaGATCTCAGTTACACACACACACGCACACGCACACGCACACGCA +
Preference number: 5 (lower is better)
Translates to: LTRESERTYSRLPSV*ISVTHTHAHAHAHA
Trigger: TGCGTGTGCGTGTGCGTGTGCGTGTGTGTGTGTAACTGAGATGCAGACAGAAGGAAGTCTGGAATAGGTTCTCTCTGACTCCCGAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598896.5
CDS-3UTR CAA 90 bp CCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAAAAGGACTCATCTCATCCAGGAAGTaGTCCAGTAGTGTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: PEEQGGLRGSEQCTTKGLISSRK*SSSVGS
Trigger: AGACCCCACACTACTGGACAACTTCCTGGATGAGAT...GAGTCCTTTTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATGCCTGGGAGCGCACCTaGTCCTTCTCATGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNAWERT*SFSWEL
Trigger: CAGCTCCCATGAGAAGGACAAGGTGCGCTCCCAGGC...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATACGATGGGGTTGAGTTaGATGAGTTTAGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNTMGLS*MSLGRA
Trigger: GGCCCTGCCTAAACTCATCAAACTCAACCCCATCGT...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATACACCAGCTGGAGGGTaGTCTGGCCTGCAGCGTGCA +
Preference number: 5 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNTPAGG*SGLQRA
Trigger: TGCACGCTGCAGGCCAGACAACCCTCCAGCTGGTGT...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS CCA 90 bp GGCTGTGAGGAAAGTGGCAGGAGCTGTGTCTTGTGGAAGATCTCATaGCATGCTGCCAGTCTTAATTCTCAACCCCAAACTTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: GCEESGRSCVLWKIS*HAASLNSQPQTWAV
Trigger: CACTGCCCAAGTTTGGGGTTGAGAATTAAGACTGGCAGCATGCCATGAGATCTTCCACAAGACACAGCTCCTGCCACTTTCCTCACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601582.1
CDS-3UTR CAA 90 bp CTGTCCTGGGAATGGGCTAGAACTTTCCTCAGATCACCAAAGGGGTCGGGGAATAGTAGTGTGGGGTCTTaGTTGATGATCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LSWEWARTFLRSPKGSGNSSVGS*LMISSW
Trigger: CCAGGAGCTGATCATCAACAAAGACCCCACACTACT...ATTCCCCGACCCCTTTGGTGATCTGAGGAAAGTTCTAGCCCATTCCCAGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp AAGAAACAAGGTCAAATTCCCACCTCGGCCTGCGAGACTCCTGTGTGGGCAGGCTCCCTCAAGAGCATGTaGAGGTTTGCAATGAGTTTC +
Preference number: 5 (lower is better)
Translates to: KKQGQIPTSACETPVWAGSLKSM*RFAMSF
Trigger: GAAACTCATTGCAAACCTCAACATGCTCTTGAGGGA...GCCTGCCCACACAGGAGTCTCGCAGGCCGAGGTGGGAATTTGACCTTGTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp CAAGCTCCCCAGAGGAACAGGGTGGTCTACGGGGGAGTGAACAGTGCACAACAATCCCTCAAGAGCATGTaGAGGTTTGCAATGAGTTTC +
Preference number: 5 (lower is better)
Translates to: QAPQRNRVVYGGVNSAQQSLKSM*RFAMSF
Trigger: GAAACTCATTGCAAACCTCAACATGCTCTTGAGGGA...TTGTTGTGCACTGTTCACTCCCCCGTAGACCACCCTGTTCCTCTGGGGAGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATGTGATCTTTGAGTCATaGGTGATCAGCGCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNVIFES*VISAAW
Trigger: CCAGGCGGCGCTGATCACCAATGACTCAAAGATCAC...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGAGGCAGTCCTCATACTaGTCCAGGGAGCCCGAGGCA +
Preference number: 5 (lower is better)
Translates to: VCVNPLKLYANNMSILSWRQSSY*SREPEA
Trigger: TGCCTCGGGCTCCCTGGACAAGTATGAGGACTGCCT...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGGGCTGGGCTGGATaGTCACCCGAACACCTACAA +
Preference number: 5 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNMGWAG*SPEHLQ
Trigger: TTGTAGGTGTTCGGGTGACAATCCAGCCCAGCCCAT...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CAA 90 bp GCCTTGGGGTGTGTGTGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATGTGACAGTCTTTGACTaGGCAGATTCCAGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: ALGCVCVCVNPLKLYANNVTVFD*ADSSGG
Trigger: GCCCCCACTGGAATCTGCCAAGTCAAAGACTGTCAC...ATTATTTGCATACAGTTTGAGGGGGTTCACACATACACACACACACCCCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS GCA 90 bp CTTCACCACGTTCACATTCTCGTCCCTCAAGAGCATGTTGAGGTTTaGAATGAGTTTCAGCAGCAACTCAATGTCTCGCTTGCATGCCTC +
Preference number: 5 (lower is better)
Translates to: LHHVHILVPQEHVEV*NEFQQQLNVSLACL
Trigger: GAGGCATGCAAGCGAGACATTGAGTTGCTGCTGAAACTCATTGCAAACCTCAACATGCTCTTGAGGGACGAGAATGTGAACGTGGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS GCA 90 bp AGAACAGGGTTCAAAAGCTGGCGGCTGGATGATCTGGGCAGAGACTaGACCTCTCTGAAACTCATTTCTTCCGTTTGTCAAACAGGGATT +
Preference number: 5 (lower is better)
Translates to: RTGFKSWRLDDLGRD*TSLKLISSVCQTGI
Trigger: AATCCCTGTTTGACAAACGGAAGAAATGAGTTTCAGAGAGGTGCAGTCTCTGCCCAGATCATCCAGCCGCCAGCTTTTGAACCCTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS-3UTR CAA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCAGCGCTGTGGTCAGGTaGATGGAGGAGATGGCAGGG +
Preference number: 5 (lower is better)
Translates to: CVCVNPLKLYANNMSILSSAVVR*MEEMAG
Trigger: CCCTGCCATCTCCTCCATCAACCTGACCACAGCGCT...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTCGTCCTCCCCCAGGTaGGGCTCCAGCTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: CVCVNPLKLYANNMSILSSSSPR*GSSFIF
Trigger: GAAGATGAAGCTGGAGCCCAACCTGGGGGAGGACGA...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGAGCCGAGCCAGGTGCTaGATCTGGGCTTCCGTGCCT +
Preference number: 5 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQSRARC*IWASVP
Trigger: AGGCACGGAAGCCCAGATCAAGCACCTGGCTCGGCT...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCGCCTTCAGGCCCGAGTaGAACTGTGTCACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: CVCVNPLKLYANNMSILSAFRPE*NCVTRL
Trigger: CAGCCTGGTGACACAGTTCAACTCGGGCCTGAAGGC...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGGCCTCCAGCACAACCTaGGTGAAGATCCCATCCTTC +
Preference number: 5 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKASSTT*VKIPSF
Trigger: GAAGGATGGGATCTTCACCAAGGTTGTGCTGGAGGC...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS TCA 90 bp GCATGCCTCCTCGATGAAGCCGATGACAAATTTTCGCACTTCGATTaGCTTGTCTGCTTGGAATGCGATGATCTCATCCAGGAAGTTGTC +
Preference number: 5 (lower is better)
Translates to: ACLLDEADDKFSHFD*LVCLECDDLIQEVV
Trigger: GACAACTTCCTGGATGAGATCATCGCATTCCAAGCAGACAAGTCAATCGAAGTGCGAAAATTTGTCATCGGCTTCATCGAGGAGGCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS CCA 90 bp AAGATCTCATGGCATGCTGCCAGTCTTAATTCTCAACCCCAAACTTaGGCAGTGGTCTTGCAGGCATCTACTAGAAAAGTTCCTTCACCC +
Preference number: 5 (lower is better)
Translates to: KISWHAASLNSQPQT*AVVLQASTRKVPSP
Trigger: GGGTGAAGGAACTTTTCTAGTAGATGCCTGCAAGACCACTGCCCAAGTTTGGGGTTGAGAATTAAGACTGGCAGCATGCCATGAGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601582.1
CDS-3UTR CAA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGTCCTTGGGCTCCTCCTaGCACTGTTTGGTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: VCVNPLKLYANNMSILSWSLGSS*HCLVCS
Trigger: AGAGCAGACCAAACAGTGCAAGGAGGAGCCCAAGGA...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TTCCTCAGATCACCAAAGGGGTCGGGGAATGTGAAGACCACAGCCCTGGCCTATAAGCTGAAGACAGTGTaGACTGTATGTTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: FLRSPKGSGNVKTTALAYKLKTV*TVCFCF
Trigger: AAAACAGAAACATACAGTCAACACTGTCTTCAGCTT...ATAGGCCAGGGCTGTGGTCTTCACATTCCCCGACCCCTTTGGTGATCTGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599814.5
CDS-3UTR CAA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCGGAGAAAAACTTGGGTaGGGTGCTGGGGACACCAGC +
Preference number: 5 (lower is better)
Translates to: CVCVNPLKLYANNMSILSGEKLG*GAGDTS
Trigger: GCTGGTGTCCCCAGCACCCAACCCAAGTTTTTCTCC...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGAGACGGAAAATTTTCTaGCGCCCACCAGCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQRRKIF*RPPAPA
Trigger: GGCAGGCGCTGGTGGGCGCAAGAAAATTTTCCGTCT...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TGCTCTCTTGACCTTAAACGTTTCTCAGAGAACTTGCAGAGGAAGGTTAGGAAGGGAAGCGCCTCACCTTaGATGATGGATTTCATGTCG +
Preference number: 5 (lower is better)
Translates to: CSLDLKRFSENLQRKVRKGSASP*MMDFMS
Trigger: CGACATGAAATCCATCATCAAAGGTGAGGCGCTTCC...CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACGTTTAAGGTCAAGAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGAAGCTCAGACCTGACTaGCCTCCCAGAGACCCTCAA +
Preference number: 5 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQKLRPD*PPRDPQ
Trigger: TTGAGGGTCTCTGGGAGGCAAGTCAGGTCTGAGCTT...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp GTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTGGCGTTTCTCAGAGAACTaGCAGAGGAAGGTTAGGAAG +
Preference number: 5 (lower is better)
Translates to: VCVNPLKLYANNMSILSWRFSEN*QRKVRK
Trigger: CTTCCTAACCTTCCTCTGCAAGTTCTCTGAGAAACG...CCAGGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TGTGTATGTGTGAACCCCCTCAAACTGTATGCAAATAATATGAGCATACTGTCCTTCACCACGATGGGGTaGAGTTTGATGAGTTTAGGC +
Preference number: 5 (lower is better)
Translates to: CVCVNPLKLYANNMSILSFTTMG*SLMSLG
Trigger: GCCTAAACTCATCAAACTCAACCCCATCGTGGTGAA...GGACAGTATGCTCATATTATTTGCATACAGTTTGAGGGGGTTCACACATACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS-3UTR CAA 90 bp TTAGGAAGTAAGTCACTGAAAAGCTGTTTCAAGCTAGAACACGAAAGTAAGCAGGGAAGCGCCTCACCTTaGATGATGGATTTCATGTCG +
Preference number: 5 (lower is better)
Translates to: LGSKSLKSCFKLEHESKQGSASP*MMDFMS
Trigger: CGACATGAAATCCATCATCAAAGGTGAGGCGCTTCC...CTGCTTACTTTCGTGTTCTAGCTTGAAACAGCTTTTCAGTGACTTACTTCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS CCA 90 bp GCCTCTCTTTTAGTAAATACATACAATTTCGTCCTCCTCCATCTCTaGTCTGGAAATTCACATATGCTTCGCTTGGGGAGGGTTATAATC +
Preference number: 5 (lower is better)
Translates to: ASLLVNTYNFVLLHL*SGNSHMLRLGRVII
Trigger: GATTATAACCCTCCCCAAGCGAAGCATATGTGAATTTCCAGACCAGAGATGGAGGAGGACGAAATTGTATGTATTTACTAAAAGAGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596518.1
CDS CCA 90 bp TCTTTTAGTAAATACATACAATTTCGTCCTCCTCCATCTCTGGTCTaGAAATTCACATATGCTTCGCTTGGGGAGGGTTATAATCACCAC +
Preference number: 5 (lower is better)
Translates to: SFSKYIQFRPPPSLV*KFTYASLGEGYNHH
Trigger: GTGGTGATTATAACCCTCCCCAAGCGAAGCATATGTGAATTTCCAGACCAGAGATGGAGGAGGACGAAATTGTATGTATTTACTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596518.1
CDS GCA 72 bp GCTCTGGCCTCCGTTCCCCTCGCGCCCCCTCAGCAGTaGCTCTTCCTACACTCCGCCGCCGCCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: ALASVPLAPPQQ*LFLHSAAAAAA
Trigger: GGCGGCGGCGGCGGCGGCGGAGTGTAGGAAGAGGCACTGCTGAGGGGGCGCGAGGGGAACGGAGGCCAGAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593959.1
ENST00000594293.5
ENST00000598059.5
CDS GCA 72 bp GGGGCCGCTTGCGGGTGTCCTTGCTGCTCGGCATGTTaGGGGCGATCTCGGCCTGAGGTGTGCCCAGGTCCA +
Preference number: 6 (lower is better)
Translates to: GAACGCPCCSAC*GRSRPEVCPGP
Trigger: TGGACCTGGGCACACCTCAGGCCGAGATCGCCCGCAACATGCCGAGCAGCAAGGACACCCGCAAGCGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000596518.1
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601582.1
CDS GCA 72 bp CCGAGTCATCGCGGGGCCGCTTGCGGGTGTCCTTGCTaGTCGGCATGTTGCGGGCGATCTCGGCCTGAGGTG +
Preference number: 6 (lower is better)
Translates to: PSHRGAACGCPC*SACCGRSRPEV
Trigger: CACCTCAGGCCGAGATCGCCCGCAACATGCCGAGCAGCAAGGACACCCGCAAGCGGCCCCGCGATGACTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000596518.1
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601582.1
CDS CAA 72 bp CTTAGGGGAGGGTCAGGTGTTGCCCGGCAGGGTGGCTaGCGGGGCATGCTGGCGCCCAGGGTGAGACTGAGG +
Preference number: 6 (lower is better)
Translates to: LRGGSGVARQGG*RGMLAPRVRLR
Trigger: CCTCAGTCTCACCCTGGGCGCCAGCATGCCCCGCAAGCCACCCTGCCGGGCAACACCTGACCCTCCCCTAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598329.2
CDS CAA 72 bp CAGACCCAGGGTGAGAGCTTAGGGGAGGGTCAGGTGTaGCCCGGCAGGGTGGCTTGCGGGGCATGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: QTQGESLGEGQV*PGRVACGACWR
Trigger: GCGCCAGCATGCCCCGCAAGCCACCCTGCCGGGCAACACCTGACCCTCCCCTAAGCTCTCACCCTGGGTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598329.2
CDS TCA 72 bp TGCAGAGGAAGAGGCCGCCTGGCTCCCGGGCCCTGCTaGATTGTAGGAGCTCAGGGCCAGCAGGCCCTCCCT +
Preference number: 6 (lower is better)
Translates to: CRGRGRLAPGPC*IVGAQGQQALP
Trigger: AGGGAGGGCCTGCTGGCCCTGAGCTCCTACAATTCAGCAGGGCCCGGGAGCCAGGCGGCCTCTTCCTCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS GCA 72 bp AGTCCGAGTCATCGCGGGGCCGCTTGCGGGTGTCCTTaGTGCTCGGCATGTTGCGGGCGATCTCGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: SPSHRGAACGCP*CSACCGRSRPE
Trigger: CTCAGGCCGAGATCGCCCGCAACATGCCGAGCAGCAAGGACACCCGCAAGCGGCCCCGCGATGACTCGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000596518.1
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601582.1
CDS TCA 72 bp CTCACTCCAAGCCCTACCCGCCACGCTCACCCTCTCTaGGGTGGTCATGCCATCGATGCCCGGCCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LTPSPTRHAHPL*GGHAIDARPLL
Trigger: GAGGAGGGGCCGGGCATCGATGGCATGACCACCTCAGAGAGGGTGAGCGTGGCGGGTAGGGCTTGGAGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593959.1
CDS GCA 72 bp TCAGCTGTGATGTCCGTGTCTGACTGGCCGGAGATCTaGGCTGAGGCCTTCGAGGTCCCCGACGGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: SAVMSVSDWPEI*AEAFEVPDGPG
Trigger: GCCAGGCCCGTCGGGGACCTCGAAGGCCTCAGCGCAGATCTCCGGCCAGTCAGACACGGACATCACAGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 72 bp GAGCTCAGGGAACCCACCACCGAGATGGCTTGGCCCTaGGCTGACAGGCGCCGCTTGATCAGGACGCTCTCT +
Preference number: 6 (lower is better)
Translates to: ELREPTTEMAWP*ADRRRLIRTLS
Trigger: AGAGAGCGTCCTGATCAAGCGGCGCCTGTCAGCCCAGGGCCAAGCCATCTCGGTGGTGGGTTCCCTGAGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 72 bp GACATGGAGCTCAGGGAACCCACCACCGAGATGGCTTaGCCCTGGGCTGACAGGCGCCGCTTGATCAGGACG +
Preference number: 6 (lower is better)
Translates to: DMELREPTTEMA*PWADRRRLIRT
Trigger: CGTCCTGATCAAGCGGCGCCTGTCAGCCCAGGGCCAAGCCATCTCGGTGGTGGGTTCCCTGAGCTCCATGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 72 bp TGCCAGCCGGGGCTGAGTGACAGGGATAATGGGCTCTaGCCTCCTCTTGGCCTGCGGTGCCTCTTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: CQPGLSDRDNGL*PPLGLRCLFLQ
Trigger: CTGGAGGAAGAGGCACCGCAGGCCAAGAGGAGGCCAGAGCCCATTATCCCTGTCACTCAGCCCCGGCTGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CAA 72 bp TTCTTGAGTGTGGAGTCCGAGTCATCGCGGGGCCGCTaGCGGGTGTCCTTGCTGCTCGGCATGTTGCGGGCG +
Preference number: 6 (lower is better)
Translates to: FLSVESESSRGR*RVSLLLGMLRA
Trigger: CGCCCGCAACATGCCGAGCAGCAAGGACACCCGCAAGCGGCCCCGCGATGACTCGGACTCCACACTCAAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000596518.1
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601582.1
CDS TCA 72 bp CGTCCTCCCCCAGGTTGGGCTCCAGCTTCATCTTCTTaGGTGTGGAGTCCGAGTCATCGCGGGGCCGCTTGC +
Preference number: 6 (lower is better)
Translates to: RPPPGWAPASSS*VWSPSHRGAAC
Trigger: GCAAGCGGCCCCGCGATGACTCGGACTCCACACTCAAGAAGATGAAGCTGGAGCCCAACCTGGGGGAGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000596518.1
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601582.1
CDS TCA 72 bp CAGGGAACCCACCACCGAGATGGCTTGGCCCTGGGCTaGCAGGCGCCGCTTGATCAGGACGCTCTCTGTCTT +
Preference number: 6 (lower is better)
Translates to: QGTHHRDGLALG*QAPLDQDALCL
Trigger: AAGACAGAGAGCGTCCTGATCAAGCGGCGCCTGTCAGCCCAGGGCCAAGCCATCTCGGTGGTGGGTTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS TCA 72 bp TCTTTGACTTGGCAGATTCCAGTGGGGGCATGTGGGTaGCTGAGGTCCTGCCCTGGCGTCGCAGGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SLTWQIPVGACG*LRSCPGVAGAR
Trigger: CCTGGCCCCTGCGACGCCAGGGCAGGACCTCAGTCACCCACATGCCCCCACTGGAATCTGCCAAGTCAAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS CCA 72 bp GGCTGCAGGAACTCAGCTGTGATGTCCGTGTCTGACTaGCCGGAGATCTGCGCTGAGGCCTTCGAGGTCCCC +
Preference number: 6 (lower is better)
Translates to: GCRNSAVMSVSD*PEICAEAFEVP
Trigger: GGGGACCTCGAAGGCCTCAGCGCAGATCTCCGGCCAGTCAGACACGGACATCACAGCTGAGTTCCTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 72 bp GTGATCAGCGCCGCCTGGTTCAGAAGATCCACCACCTaGAAGGAGGGGGAGTGGCAGGGGATAGTGCCAGCC +
Preference number: 6 (lower is better)
Translates to: VISAAWFRRSTT*KEGEWQGIVPA
Trigger: GGCTGGCACTATCCCCTGCCACTCCCCCTCCTTCCAGGTGGTGGATCTTCTGAACCAGGCGGCGCTGATCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593959.1
CDS CCA 72 bp TGGATCAAGCTCAGGGAACCAGCGGATGGGCTGGGCTaGATTGTCACCCGAACACCGCAGCTCTGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: WIKLREPADGLG*IVTRTPQLWPP
Trigger: CGGAGGCCAGAGCTGCGGTGTTCGGGTGACAATCCAGCCCAGCCCATCCGCTGGTTCCCTGAGCTTGATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598059.5
CDS CCA 72 bp GACTCACCGGGGCTGAGTGACAGGGATAATGGGCTCTaGCCTCCTCTTGGCCTGCGGTGCCTCTTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: DSPGLSDRDNGL*PPLGLRCLFLQ
Trigger: CTGGAGGAAGAGGCACCGCAGGCCAAGAGGAGGCCAGAGCCCATTATCCCTGTCACTCAGCCCCGGTGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598896.5
CDS CAA 72 bp GCTGTCATCTGTGTGGCCATGAGCCGAGCCAGGTGCTaGATCTGGGCTTCCGTGCCTGCTGACTCCACGGGG +
Preference number: 6 (lower is better)
Translates to: AVICVAMSRARC*IWASVPADSTG
Trigger: CCCCGTGGAGTCAGCAGGCACGGAAGCCCAGATCAAGCACCTGGCTCGGCTCATGGCCACACAGATGACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CAA 72 bp CTGTCTCCACTGCCGCTCGCCATGGCTGCTGTCAGCTaGCAGGTCTCCGTGTGTCCCCTCTCTCCATCTGGG +
Preference number: 6 (lower is better)
Translates to: LSPLPLAMAAVS*QVSVCPLSPSG
Trigger: CCCAGATGGAGAGAGGGGACACACGGAGACCTGCAAGCTGACAGCAGCCATGGCGAGCGGCAGTGGAGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601600.1
CDS CAA 90 bp AGCTTCATCTTCTTGAGTGTGGAGTCCGAGTCATCGCGGGGCCGCTaGCGGGTGTCCTTGCTGCTCGGCATGTTGCGGGCGATCTCGGCC +
Preference number: 6 (lower is better)
Translates to: SFIFLSVESESSRGR*RVSLLLGMLRAISA
Trigger: GGCCGAGATCGCCCGCAACATGCCGAGCAGCAAGGACACCCGCAAGCGGCCCCGCGATGACTCGGACTCCACACTCAAGAAGATGAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000596518.1
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601582.1
CDS CAA 90 bp TGCGCTGAGGCCTTCGAGGTCCCCGACGGGCCTGGCTCCAAGTCTTaGTCCTCATCGTCCTCCCCCAGGTTGGGCTCCAGCTTCATCTTC +
Preference number: 6 (lower is better)
Translates to: CAEAFEVPDGPGSKS*SSSSSPRLGSSFIF
Trigger: GAAGATGAAGCTGGAGCCCAACCTGGGGGAGGACGATGAGGACAAAGACTTGGAGCCAGGCCCGTCGGGGACCTCGAAGGCCTCAGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CAA 90 bp GAACCCACCACCGAGATGGCTTGGCCCTGGGCTGACAGGCGCCGCTaGATCAGGACGCTCTCTGTCTTCACCACCTTCTCCTCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: EPTTEMAWPWADRRR*IRTLSVFTTFSSLG
Trigger: GCCCAAGGAGGAGAAGGTGGTGAAGACAGAGAGCGTCCTGATCAAGCGGCGCCTGTCAGCCCAGGGCCAAGCCATCTCGGTGGTGGGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS TCA 72 bp AGCCACGCAGAGCAAGCTCAGAGCAAGTGGCAGAGCTaGGGAACAGCTCAGGGAGTGCGACCTGGAGCCCAC +
Preference number: 6 (lower is better)
Translates to: SHAEQAQSKWQS*GTAQGVRPGAH
Trigger: GTGGGCTCCAGGTCGCACTCCCTGAGCTGTTCCTCAGCTCTGCCACTTGCTCTGAGCTTGCTCTGCGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS GCA 72 bp GCAGTCCTCATACTTGTCCAGGGAGCCCGAGGCACCTaGGGCCAGGTAGGCGTTGTACTCCTGGTAGAGCCA +
Preference number: 6 (lower is better)
Translates to: AVLILVQGARGT*GQVGVVLLVEP
Trigger: TGGCTCTACCAGGAGTACAACGCCTACCTGGCCGCAGGTGCCTCGGGCTCCCTGGACAAGTATGAGGACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000599460.5
ENST00000599814.5
CDS CCA 72 bp GCTTCAGATTCTTACGCACACTGCTCACCTGCGATTTaGCCAGCGTCGGGGGCAGGTTGGCTGGGGCCAGTG +
Preference number: 6 (lower is better)
Translates to: ASDSYAHCSPAI*PASGAGWLGPV
Trigger: CACTGGCCCCAGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593899.5
CDS CCA 72 bp GAGGATGGATCAAGCTCAGGGAACCAGCGGATGGGCTaGGCTGGATTGTCACCCGAACACCGCAGCTCTGGC +
Preference number: 6 (lower is better)
Translates to: EDGSSSGNQRMG*AGLSPEHRSSG
Trigger: GCCAGAGCTGCGGTGTTCGGGTGACAATCCAGCCCAGCCCATCCGCTGGTTCCCTGAGCTTGATCCATCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598059.5
CDS CCA 72 bp ACAGTCTTTGACTTGGCAGATTCCAGTGGGGGCATGTaGGTGACTGAGGTCCTGCCCTGGCGTCGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: TVFDLADSSGGM*VTEVLPWRRRG
Trigger: GCCCCTGCGACGCCAGGGCAGGACCTCAGTCACCCACATGCCCCCACTGGAATCTGCCAAGTCAAAGACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS CAA 72 bp TCGTCCTCCCCCAGGTTGGGCTCCAGCTTCATCTTCTaGAGTGTGGAGTCCGAGTCATCGCGGGGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: SSSPRLGSSFIF*SVESESSRGRL
Trigger: CAAGCGGCCCCGCGATGACTCGGACTCCACACTCAAGAAGATGAAGCTGGAGCCCAACCTGGGGGAGGACGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000596518.1
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601582.1
CDS CAA 90 bp ACCTCCAGGGCACTCTCTGTGATGAGTGGCGCCTCCAGCACAACCTaGGTGAAGATCCTGCCAGAGATGGAGGGAGGGCCATGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: TSRALSVMSGASSTT*VKILPEMEGGPWLQ
Trigger: CTGCAGCCATGGCCCTCCCTCCATCTCTGGCAGGATCTTCACCAAGGTTGTGCTGGAGGCGCCACTCATCACAGAGAGTGCCCTGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS CAA 90 bp CGGGTGACGCTGTCTCCACTGCCGCTCGCCATGGCTGCTGTCAGCTaGCAGGTCTCCGTGTGTCCCCTCTCTCCATCTGGGATATGCTTT +
Preference number: 6 (lower is better)
Translates to: RVTLSPLPLAMAAVS*QVSVCPLSPSGICF
Trigger: AAAGCATATCCCAGATGGAGAGAGGGGACACACGGAGACCTGCAAGCTGACAGCAGCCATGGCGAGCGGCAGTGGAGACAGCGTCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601600.1
CDS CAA 90 bp GAGGATGGATCAAGCTCAGGGAACCAGCGGATGGGCTGGGCTGGATaGTCACCCGAACACCTACAAAGGGCCCAAGCCTCCTTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: EDGSSSGNQRMGWAG*SPEHLQRAQASFPG
Trigger: GCCTGGGAAGGAGGCTTGGGCCCTTTGTAGGTGTTCGGGTGACAATCCAGCCCAGCCCATCCGCTGGTTCCCTGAGCTTGATCCATCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS CAA 90 bp CGGGTGACGCTGTCTCCACTGCCGCTCGCCATGGCTGCTGTCAGCTaGTCCCCAGGAAAGAAGAGGATGGATCAAGCTCAGGGAACCAGC +
Preference number: 6 (lower is better)
Translates to: RVTLSPLPLAMAAVS*SPGKKRMDQAQGTS
Trigger: GCTGGTTCCCTGAGCTTGATCCATCCTCTTCTTTCCTGGGGACAAGCTGACAGCAGCCATGGCGAGCGGCAGTGGAGACAGCGTCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598059.5
ENST00000599814.5
ENST00000600237.5
CDS TCA 72 bp GAGGTGGTCATGCCATCGATGCCCGGCCCCTCCTCTTaGGTGAAAAACTGTGATGCCACGCTCCGACGGGTG +
Preference number: 6 (lower is better)
Translates to: EVVMPSMPGPSS*VKNCDATLRRV
Trigger: CACCCGTCGGAGCGTGGCATCACAGTTTTTCACTCAAGAGGAGGGGCCGGGCATCGATGGCATGACCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593959.1
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601600.1
ENST00000602061.5
CDS TCA 72 bp GGTCTGGTTTCTCCTGCAGGCCAGACAACAGGCGGATaGGGCAGTCCTCATACTTGTCCAGGGAGCCCGAGG +
Preference number: 6 (lower is better)
Translates to: GLVSPAGQTTGG*GSPHTCPGSPR
Trigger: CCTCGGGCTCCCTGGACAAGTATGAGGACTGCCTCATCCGCCTGTTGTCTGGCCTGCAGGAGAAACCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000599460.5
ENST00000599814.5
CDS TCA 72 bp TCCTGCCCTAGCACCCAGAAGAGGACTCACCGGGGCTaGGTGACAGGGATAATGGGCTCTGGCCTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: SCPSTQKRTHRG*VTGIMGSGLLL
Trigger: CAAGAGGAGGCCAGAGCCCATTATCCCTGTCACTCAGCCCCGGTGAGTCCTCTTCTGGGTGCTAGGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598896.5
CDS TCA 72 bp ACACACACGCACACGCACACGCACACGCACACGAGCTaGGAACCAGACCTTCAGGGTAGGGCTCCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: THTHTHTHTHTS*EPDLQGRAPVL
Trigger: CAGGACAGGAGCCCTACCCTGAAGGTCTGGTTCTCAGCTCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598896.5
CDS GCA 72 bp AGGTGCAGCTTCAGATTCTTACGCACACTGCTCACCTaGGATTTGGCCAGCGTCGGGGGCAGGTTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: RCSFRFLRTLLT*DLASVGGRLAG
Trigger: CCCAGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593899.5
CDS CCA 72 bp TCACGAGGGATGCGGTCCAGGCTGATATCATGCTCCTaGCGTCGGGGTATCTCTGAGTCAGCCATGCGGGGT +
Preference number: 6 (lower is better)
Translates to: SRGMRSRLISCS*RRGISESAMRG
Trigger: ACCCCGCATGGCTGACTCAGAGATACCCCGACGCCAGGAGCATGATATCAGCCTGGACCGCATCCCTCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 72 bp CTTGCGGACCACCTCCAGGGCACTCTCTGTGATGAGTaGCGCCTCCAGCACAACCTTGGTGAAGATCCTGCC +
Preference number: 6 (lower is better)
Translates to: LADHLQGTLCDE*RLQHNLGEDPA
Trigger: GGCAGGATCTTCACCAAGGTTGTGCTGGAGGCGCCACTCATCACAGAGAGTGCCCTGGAGGTGGTCCGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS CCA 72 bp CTTGCGGACCACCTCCAGGGCACTCTCTGTGATGAGTaGCGCCTCCAGCACAACCTTGGTGAAGATCCTGCG +
Preference number: 6 (lower is better)
Translates to: LADHLQGTLCDE*RLQHNLGEDPA
Trigger: CGCAGGATCTTCACCAAGGTTGTGCTGGAGGCGCCACTCATCACAGAGAGTGCCCTGGAGGTGGTCCGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600237.5
CDS CAA 72 bp AGCTTCAGATTCTTACGCACACTGCTCACCTGCGATTaGGCCAGCGTCGGGGGCAGGTTGGCTGGGGCCAGT +
Preference number: 6 (lower is better)
Translates to: SFRFLRTLLTCD*ASVGGRLAGAS
Trigger: ACTGGCCCCAGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593899.5
CDS CAA 72 bp TCAAGCTCAGGGAACCAGCGGATGGGCTGGGCTGGATaGTCACCCGAACACCTACAAAGGGCCCAAGCCTCC +
Preference number: 6 (lower is better)
Translates to: SSSGNQRMGWAG*SPEHLQRAQAS
Trigger: GGAGGCTTGGGCCCTTTGTAGGTGTTCGGGTGACAATCCAGCCCAGCCCATCCGCTGGTTCCCTGAGCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS CAA 90 bp CTCTGGCGGGCGATATTGGCAAGGGAGCCCAGCGCTGTGGTCAGGTaGATGGAGGAGATGGCAGGGTGCACCATGAACTTAAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LWRAILAREPSAVVR*MEEMAGCTMNLSSC
Trigger: GCAGCTGCTTAAGTTCATGGTGCACCCTGCCATCTCCTCCATCAACCTGACCACAGCGCTGGGCTCCCTTGCCAATATCGCCCGCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS TCA 72 bp ATCGATGCCCGGCCCCTCCTCTTGAGTGAAAAACTGTaGTGCCACGCTCCGACGGGTGACGCTGTCTCCACT +
Preference number: 6 (lower is better)
Translates to: IDARPLLLSEKL*CHAPTGDAVST
Trigger: AGTGGAGACAGCGTCACCCGTCGGAGCGTGGCATCACAGTTTTTCACTCAAGAGGAGGGGCCGGGCATCGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593959.1
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601600.1
ENST00000602061.5
CDS TCA 72 bp GGATGTAGGGGTGGTCACGAGGGATGCGGTCCAGGCTaGTATCATGCTCCTGGCGTCGGGGTATCTCTGAGT +
Preference number: 6 (lower is better)
Translates to: GCRGGHEGCGPG*YHAPGVGVSLS
Trigger: ACTCAGAGATACCCCGACGCCAGGAGCATGATATCAGCCTGGACCGCATCCCTCGTGACCACCCCTACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS TCA 72 bp TATCAGGCGTCAGCAGAGGCTGCAGGAACTCAGCTGTaGTGTCCGTGTCTGACTGGCCGGAGATCTGCGCTG +
Preference number: 6 (lower is better)
Translates to: YQASAEAAGTQL*CPCLTGRRSAL
Trigger: CAGCGCAGATCTCCGGCCAGTCAGACACGGACATCACAGCTGAGTTCCTGCAGCCTCTGCTGACGCCTGATA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS TCA 72 bp CCTGCGATTTGGCCAGCGTCGGGGGCAGGTTGGCTGTaGGGAAAGTGGCAGGAGCTGTGTCTTGTGGAAGAT +
Preference number: 6 (lower is better)
Translates to: PAIWPASGAGWL*GKWQELCLVED
Trigger: ATCTTCCACAAGACACAGCTCCTGCCACTTTCCTCACAGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601582.1
CDS GCA 72 bp AGGTGCAGCTTCAGATTCTTACGCACACTGCTCACCTaGGATTTGGCCAGCGTCGGGGGCAGGTTGGCATGC +
Preference number: 6 (lower is better)
Translates to: RCSFRFLRTLLT*DLASVGGRLAC
Trigger: GCATGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS GCA 72 bp TCGGCACTCCCAGGGCTCTGCCACCTAAACAGGGATTaGCAAAGCCAGGGGCTATGCTTCCTCACTCCAAGC +
Preference number: 6 (lower is better)
Translates to: SALPGLCHLNRD*QSQGLCFLTPS
Trigger: GCTTGGAGTGAGGAAGCATAGCCCCTGGCTTTGGCAATCCCTGTTTAGGTGGCAGAGCCCTGGGAGTGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593959.1
CDS GCA 72 bp AGGTGCAGCTTCAGATTCTTACGCACACTGCTCACCTaGGATTTGGCCAGCGTCGGGGGCAGGTTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: RCSFRFLRTLLT*DLASVGGRLAV
Trigger: CACAGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601582.1
CDS GCA 72 bp AGGTGCAGCTTCAGATTCTTACGCACACTGCTCACCTaGGATTTGGCCAGCGTCGGGGGCAGGTTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: RCSFRFLRTLLT*DLASVGGRLAS
Trigger: AGAGGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596518.1
CDS CCA 72 bp CTTGCGGACCACCTCCAGGGCACTCTCTGTGATGAGTaGCGCCTCCAGCACAACCTTGGTGAAGATCCCATC +
Preference number: 6 (lower is better)
Translates to: LADHLQGTLCDE*RLQHNLGEDPI
Trigger: GATGGGATCTTCACCAAGGTTGTGCTGGAGGCGCCACTCATCACAGAGAGTGCCCTGGAGGTGGTCCGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245934.12
ENST00000599460.5
ENST00000599814.5
CDS CCA 72 bp GAGCTGAGGTCGAGGAGGACATGCAGGTACTGGAACTaGCGGGACGGGCGCTTGAAGATCAGGTCTCGAAGT +
Preference number: 6 (lower is better)
Translates to: ELRSRRTCRYWN*RDGRLKIRSRS
Trigger: ACTTCGAGACCTGATCTTCAAGCGCCCGTCCCGCCAGTTCCAGTACCTGCATGTCCTCCTCGACCTCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 72 bp GAGGATGGATCAAGCTCAGGGAACCAGCGGATGGGCTaGGCTGGATTGTCACCCGAACACCTACAAAGGGCC +
Preference number: 6 (lower is better)
Translates to: EDGSSSGNQRMG*AGLSPEHLQRA
Trigger: GGCCCTTTGTAGGTGTTCGGGTGACAATCCAGCCCAGCCCATCCGCTGGTTCCCTGAGCTTGATCCATCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS CAA 72 bp CGGGGTGACAGGGTGACAATGAGGCCCTCCACAAACTaGATGGCGTGGGTGCGGATGCCGTCATTGTCAGAG +
Preference number: 6 (lower is better)
Translates to: RGDRVTMRPSTN*MAWVRMPSLSE
Trigger: CTCTGACAATGACGGCATCCGCACCCACGCCATCAAGTTTGTGGAGGGCCTCATTGTCACCCTGTCACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CAA 72 bp GCACTCTCTGTGATGAGTGGCGCCTCCAGCACAACCTaGGTGAAGATCCTGCCAGAGATGGAGGGAGGGCCA +
Preference number: 6 (lower is better)
Translates to: ALSVMSGASSTT*VKILPEMEGGP
Trigger: TGGCCCTCCCTCCATCTCTGGCAGGATCTTCACCAAGGTTGTGCTGGAGGCGCCACTCATCACAGAGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS CAA 72 bp CTCGGCACTCCCAGGGCTCTGCCACCTAAACAGGGATaGCCAAAGCCAGGGGCTATGCTTCCTCACTCCAAG +
Preference number: 6 (lower is better)
Translates to: LGTPRALPPKQG*PKPGAMLPHSK
Trigger: CTTGGAGTGAGGAAGCATAGCCCCTGGCTTTGGCAATCCCTGTTTAGGTGGCAGAGCCCTGGGAGTGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593959.1
CDS CAA 72 bp CTGAACGATGGGCCACATGAACGTGCAACAGCCACCTaGCAGGTCTCCGTGTGTCCCCTCTCTCCATCTGGG +
Preference number: 6 (lower is better)
Translates to: LNDGPHERATAT*QVSVCPLSPSG
Trigger: CCCAGATGGAGAGAGGGGACACACGGAGACCTGCAAGGTGGCTGTTGCACGTTCATGTGGCCCATCGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS CAA 90 bp GCCTGGATCACCTCAGACATGAACATGGGTCTCTGGCGGGCGATATaGGCAAGGGAGCCCAGCGCTGTGGTCAGGTTGATGGAGGAGATG +
Preference number: 6 (lower is better)
Translates to: AWITSDMNMGLWRAI*AREPSAVVRLMEEM
Trigger: CATCTCCTCCATCAACCTGACCACAGCGCTGGGCTCCCTTGCCAATATCGCCCGCCAGAGACCCATGTTCATGTCTGAGGTGATCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CAA 90 bp ACATCCTCCAGGATGAAGGACAGGACCTCCGCCTTCAGGCCCGAGTaGAACTGTGTCACCAGGCTGGCCAGGATCTTTATGCGGACCTGG +
Preference number: 6 (lower is better)
Translates to: TSSRMKDRTSAFRPE*NCVTRLARIFMRTW
Trigger: CCAGGTCCGCATAAAGATCCTGGCCAGCCTGGTGACACAGTTCAACTCGGGCCTGAAGGCGGAGGTCCTGTCCTTCATCCTGGAGGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CAA 90 bp TCAGCCATGCGGGGTGACAGGGTGACAATGAGGCCCTCCACAAACTaGATGGCGTGGGTGCGGATGCCGTCATTGTCAGAGTCCAATAGC +
Preference number: 6 (lower is better)
Translates to: SAMRGDRVTMRPSTN*MAWVRMPSLSESNS
Trigger: GCTATTGGACTCTGACAATGACGGCATCCGCACCCACGCCATCAAGTTTGTGGAGGGCCTCATTGTCACCCTGTCACCCCGCATGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CAA 90 bp TTACGCACACTGCTCACCTGCGATTTGGCCAGCGTCGGGGGCAGGTaGGCTGTGAGGAAAGTGGCAGGAGCTGTGTCTTGTGGAAGATCT +
Preference number: 6 (lower is better)
Translates to: LRTLLTCDLASVGGR*AVRKVAGAVSCGRS
Trigger: AGATCTTCCACAAGACACAGCTCCTGCCACTTTCCTCACAGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601582.1
CDS CAA 90 bp AACAGGTGCAGCTTCAGATTCTTACGCACACTGCTCACCTGCGATTaGGCCAGCGTCGGGGGCAGGTTGGCTGTGAGGAAAGTGGCAGGA +
Preference number: 6 (lower is better)
Translates to: NRCSFRFLRTLLTCD*ASVGGRLAVRKVAG
Trigger: TCCTGCCACTTTCCTCACAGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601582.1
CDS TCA 72 bp GGACATGCAGGTACTGGAACTGGCGGGACGGGCGCTTaGAGATCAGGTCTCGAAGTGTGGACATGCCCAGAT +
Preference number: 6 (lower is better)
Translates to: GHAGTGTGGTGA*RSGLEVWTCPD
Trigger: ATCTGGGCATGTCCACACTTCGAGACCTGATCTTCAAGCGCCCGTCCCGCCAGTTCCAGTACCTGCATGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS TCA 72 bp GGCCAACCACAAACAGCTGCTGAACGATGGGCCACATaGACGTGCAACAGCCACCTTGCAGGTCTCCGTGTG +
Preference number: 6 (lower is better)
Translates to: GQPQTAAERWAT*TCNSHLAGLRV
Trigger: CACACGGAGACCTGCAAGGTGGCTGTTGCACGTTCATGTGGCCCATCGTTCAGCAGCTGTTTGTGGTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS GCA 72 bp CACTCAACAGGTGCAGCTTCAGATTCTTACGCACACTaGTCACCTGCGATTTGGCCAGCGTCGGGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: HSTGAASDSYAH*SPAIWPASGAG
Trigger: ACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCTGTTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000596518.1
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601582.1
CDS CCA 72 bp AAGAAGAGGATGGATCAAGCTCAGGGAACCAGCGGATaGGCTGGGCTGGATTGTCACCCGAACACCGCAGCT +
Preference number: 6 (lower is better)
Translates to: KKRMDQAQGTSG*AGLDCHPNTAA
Trigger: AGCTGCGGTGTTCGGGTGACAATCCAGCCCAGCCCATCCGCTGGTTCCCTGAGCTTGATCCATCCTCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598059.5
CDS CAA 72 bp ACCTCAGACATGAACATGGGTCTCTGGCGGGCGATATaGGCAAGGGAGCCCAGCGCTGTGGTCAGGTTGATG +
Preference number: 6 (lower is better)
Translates to: TSDMNMGLWRAI*AREPSAVVRLM
Trigger: CATCAACCTGACCACAGCGCTGGGCTCCCTTGCCAATATCGCCCGCCAGAGACCCATGTTCATGTCTGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CAA 72 bp AGGACATGCAGGTACTGGAACTGGCGGGACGGGCGCTaGAAGATCAGGTCTCGAAGTGTGGACATGCCCAGA +
Preference number: 6 (lower is better)
Translates to: RTCRYWNWRDGR*KIRSRSVDMPR
Trigger: TCTGGGCATGTCCACACTTCGAGACCTGATCTTCAAGCGCCCGTCCCGCCAGTTCCAGTACCTGCATGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CAA 90 bp ATGAGGCCCTCCACAAACTTGATGGCGTGGGTGCGGATGCCGTCATaGTCAGAGTCCAATAGCAGGATGATGTCCCCCGCCATGGCAGAT +
Preference number: 6 (lower is better)
Translates to: MRPSTNLMAWVRMPS*SESNSRMMSPAMAD
Trigger: ATCTGCCATGGCGGGGGACATCATCCTGCTATTGGACTCTGACAATGACGGCATCCGCACCCACGCCATCAAGTTTGTGGAGGGCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS TCA 72 bp TGCGGATGCCGTCATTGTCAGAGTCCAATAGCAGGATaGTGTCCCCCGCCATGGCAGATACCATGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: CGCRHCQSPIAG*CPPPWQIPCPS
Trigger: GCTGGGACATGGTATCTGCCATGGCGGGGGACATCATCCTGCTATTGGACTCTGACAATGACGGCATCCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS TCA 72 bp GTCTCAGCCTCAAGTGGGCCAACCACAAACAGCTGCTaGACGATGGGCCACATGAACGTGCAACAGCCACCT +
Preference number: 6 (lower is better)
Translates to: VSASSGPTTNSC*TMGHMNVQQPP
Trigger: AGGTGGCTGTTGCACGTTCATGTGGCCCATCGTTCAGCAGCTGTTTGTGGTTGGCCCACTTGAGGCTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS GCA 72 bp GTGGTGATCTGGGCCTGGAACTCCAAGGAAGCCGGGTaGTTCAGCACACTCAACAGGTGCAGCTTCAGATTC +
Preference number: 6 (lower is better)
Translates to: VVIWAWNSKEAG*FSTLNRCSFRF
Trigger: GAATCTGAAGCTGCACCTGTTGAGTGTGCTGAAGCACCCGGCTTCCTTGGAGTTCCAGGCCCAGATCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000596518.1
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601582.1
CDS GCA 72 bp AATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATaGCCATTCCTCGGATCTTGGCATCTCCCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: NFPPAGAAPGSS*PFLGSWHLPAA
Trigger: AGCTGCAGGGAGATGCCAAGATCCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598155.5
CDS CCA 72 bp GCTTCAGATTCTTACGCACACTGCTCACCTGCGATTTaGCCAGCGTCGGGGGCAGGTTGGCATGCAGAGTTT +
Preference number: 6 (lower is better)
Translates to: ASDSYAHCSPAI*PASGAGWHAEF
Trigger: AAACTCTGCATGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 72 bp CCTTCTCAAGTCCCTCTCCCCTCCAGGGTCTGTCTCTaGCTTATGGATATGTGCACGGGGCCTGTAACTTGG +
Preference number: 6 (lower is better)
Translates to: PSQVPLPSRVCL*LMDMCTGPVTW
Trigger: CCAAGTTACAGGCCCCGTGCACATATCCATAAGCCAGAGACAGACCCTGGAGGGGAGAGGGACTTGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS CCA 72 bp AAGACCATGCCCAAATCCCACCATCCAAGATTCCTCTaGATGGGCAACAAGCAGCCCCGACCTCCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: KTMPKSHHPRFL*MGNKQPRPPSR
Trigger: TCTGGAGGGAGGTCGGGGCTGCTTGTTGCCCATCCAGAGGAATCTTGGATGGTGGGATTTGGGCATGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598364.1
CDS CAA 72 bp TCCACAAACTTGATGGCGTGGGTGCGGATGCCGTCATaGTCAGAGTCCAATAGCAGGATGATGTCCCCCGCC +
Preference number: 6 (lower is better)
Translates to: STNLMAWVRMPS*SESNSRMMSPA
Trigger: GGCGGGGGACATCATCCTGCTATTGGACTCTGACAATGACGGCATCCGCACCCACGCCATCAAGTTTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CAA 72 bp GCGATATTGGCAAGGGAGCCCAGCGCTGTGGTCAGGTaGATGGAGGAGATGGCAGGGTGCACCATGAACTTA +
Preference number: 6 (lower is better)
Translates to: AILAREPSAVVR*MEEMAGCTMNL
Trigger: TAAGTTCATGGTGCACCCTGCCATCTCCTCCATCAACCTGACCACAGCGCTGGGCTCCCTTGCCAATATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CAA 72 bp AGCTTCAGATTCTTACGCACACTGCTCACCTGCGATTaGGCCAGCGTCGGGGGCAGGTTGGCATGCAGAGTT +
Preference number: 6 (lower is better)
Translates to: SFRFLRTLLTCD*ASVGGRLACRV
Trigger: AACTCTGCATGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CAA 72 bp AGGATGAAGGACAGGACCTCCGCCTTCAGGCCCGAGTaGAACTGTGTCACCAGGCTGGCCAGGATCTTTATG +
Preference number: 6 (lower is better)
Translates to: RMKDRTSAFRPE*NCVTRLARIFM
Trigger: CATAAAGATCCTGGCCAGCCTGGTGACACAGTTCAACTCGGGCCTGAAGGCGGAGGTCCTGTCCTTCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CAA 72 bp AGCTTCAGATTCTTACGCACACTGCTCACCTGCGATTaGGCCAGCGTCGGGGGCAGGTTGGCTGTGAGGAAA +
Preference number: 6 (lower is better)
Translates to: SFRFLRTLLTCD*ASVGGRLAVRK
Trigger: TTTCCTCACAGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601582.1
CDS GCA 72 bp TCCAAGGAAGCCGGGTGCTTCAGCACACTCAACAGGTaGAGCTTCAGATTCTTACGCACACTGCTCACCTGC +
Preference number: 6 (lower is better)
Translates to: SKEAGCFSTLNR*SFRFLRTLLTC
Trigger: GCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCTGTTGAGTGTGCTGAAGCACCCGGCTTCCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000596518.1
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000601582.1
CDS GCA 72 bp AGAGCAAGTGGCAGAGCTGAGGAACAGCTCAGGGAGTaGGACCTGGAGCCCACATGCAAAACTACAACCTTG +
Preference number: 6 (lower is better)
Translates to: RASGRAEEQLRE*DLEPTCKTTTL
Trigger: CAAGGTTGTAGTTTTGCATGTGGGCTCCAGGTCGCACTCCCTGAGCTGTTCCTCAGCTCTGCCACTTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS GCA 72 bp AATTTTCCACCAGCAGGAGCAGCTCCGGGGAGTTCATaGCCATTCCTCGGATCTAGAGGCAGAGACAGGGAT +
Preference number: 6 (lower is better)
Translates to: NFPPAGAAPGSS*PFLGSRGRDRD
Trigger: ATCCCTGTCTCTGCCTCTAGATCCGAGGAATGGGCATGAACTCCCCGGAGCTGCTCCTGCTGGTGGAAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598329.2
CDS GCA 72 bp ACCACTTTTGCCTCCAGAAACCCCCAACTGAACTGCTaGAACAGCTCACTGCTAGTCTCCCTGACGCCAGGA +
Preference number: 6 (lower is better)
Translates to: TTFASRNPQLNC*NSSLLVSLTPG
Trigger: TCCTGGCGTCAGGGAGACTAGCAGTGAGCTGTTGCAGCAGTTCAGTTGGGGGTTTCTGGAGGCAAAAGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596518.1
CDS CCA 72 bp AGGGTGACAATGAGGCCCTCCACAAACTTGATGGCGTaGGTGCGGATGCCGTCATTGTCAGAGTCCAATAGC +
Preference number: 6 (lower is better)
Translates to: RVTMRPSTNLMA*VRMPSLSESNS
Trigger: GCTATTGGACTCTGACAATGACGGCATCCGCACCCACGCCATCAAGTTTGTGGAGGGCCTCATTGTCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS CCA 72 bp CAGCTTGCAGGTCTCCGTGTGTCCCCTCTCTCCATCTaGGATATGCTTTGGACTGGGCACCACAGCAAACTT +
Preference number: 6 (lower is better)
Translates to: QLAGLRVSPLSI*DMLWTGHHSKL
Trigger: AAGTTTGCTGTGGTGCCCAGTCCAAAGCATATCCCAGATGGAGAGAGGGGACACACGGAGACCTGCAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601600.1
CDS CCA 72 bp CACCTTGCAGGTCTCCGTGTGTCCCCTCTCTCCATCTaGGATATGCTTTGGACTGGGCACCACAGCAAACTT +
Preference number: 6 (lower is better)
Translates to: HLAGLRVSPLSI*DMLWTGHHSKL
Trigger: AAGTTTGCTGTGGTGCCCAGTCCAAAGCATATCCCAGATGGAGAGAGGGGACACACGGAGACCTGCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS CCA 72 bp CTCTGGCTTATGGATATGTGCACGGGGCCTGTAACTTaGGGGAGACTGACATCTCCCAAGGCAGAGCCAGAA +
Preference number: 6 (lower is better)
Translates to: LWLMDMCTGPVT*GRLTSPKAEPE
Trigger: TTCTGGCTCTGCCTTGGGAGATGTCAGTCTCCCCCAAGTTACAGGCCCCGTGCACATATCCATAAGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS CAA 72 bp AGCTTCAGATTCTTACGCACACTGCTCACCTGCGATTaGGCCAGCGTCGGGGGCAGGTTGGCCTCTCTTTTA +
Preference number: 6 (lower is better)
Translates to: SFRFLRTLLTCD*ASVGGRLASLL
Trigger: TAAAAGAGAGGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596518.1
CDS CAA 90 bp AAACAGCTGCTGAACGATGGGCCACATGAACGTGCAACAGCCACCTaGCAGGTCTCCGTGTGTCCCCTCTCTCCATCTGGGATATGCTTT +
Preference number: 6 (lower is better)
Translates to: KQLLNDGPHERATAT*QVSVCPLSPSGICF
Trigger: AAAGCATATCCCAGATGGAGAGAGGGGACACACGGAGACCTGCAAGGTGGCTGTTGCACGTTCATGTGGCCCATCGTTCAGCAGCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS GCA 72 bp ACCAGATTAGCCACATTATCAGGCGTCAGCAGAGGCTaGAGGAACTCAGCTGTGATGTCCGTGTCTGACTGG +
Preference number: 6 (lower is better)
Translates to: TRLATLSGVSRG*RNSAVMSVSDW
Trigger: CCAGTCAGACACGGACATCACAGCTGAGTTCCTGCAGCCTCTGCTGACGCCTGATAATGTGGCTAATCTGGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593899.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
CDS GCA 72 bp ATCACCACTTTTGCCTCCAGAAACCCCCAACTGAACTaGTGCAACAGCTCACTGCTAGTCTCCCTGACGCCA +
Preference number: 6 (lower is better)
Translates to: ITTFASRNPQLN*CNSSLLVSLTP
Trigger: TGGCGTCAGGGAGACTAGCAGTGAGCTGTTGCAGCAGTTCAGTTGGGGGTTTCTGGAGGCAAAAGTGGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596518.1
CDS CCA 72 bp ACTGTGATCTTTGAGTCATTGGTGATCAGCGCCGCCTaGTTCAGAAGATCCACCACCCTCTCTGAGGTGGTC +
Preference number: 6 (lower is better)
Translates to: TVIFESLVISAA*FRRSTTLSEVV
Trigger: GACCACCTCAGAGAGGGTGGTGGATCTTCTGAACCAGGCGGCGCTGATCACCAATGACTCAAAGATCACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS CCA 72 bp AAGAAGAGGATGGATCAAGCTCAGGGAACCAGCGGATaGGCTGGGCTGGATTGTCACCCGAACACCTACAAA +
Preference number: 6 (lower is better)
Translates to: KKRMDQAQGTSG*AGLDCHPNTYK
Trigger: TTTGTAGGTGTTCGGGTGACAATCCAGCCCAGCCCATCCGCTGGTTCCCTGAGCTTGATCCATCCTCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599814.5
ENST00000600237.5
CDS TCA 72 bp GATCAGCTCCTGGACCTGTTTGAGCACTGTGATCTTTaGGTCATTGGTGATCAGCGCCGCCTGGTTCAGAAG +
Preference number: 6 (lower is better)
Translates to: DQLLDLFEHCDL*VIGDQRRLVQK
Trigger: CTTCTGAACCAGGCGGCGCTGATCACCAATGACTCAAAGATCACAGTGCTCAAACAGGTCCAGGAGCTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593959.1
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS GCA 72 bp AGCCTTGACACTGGGAGAAAGACCTTGCCAAGACCATaGCCAAATCCCACCATCCAAGATTCCTCTGGATGG +
Preference number: 6 (lower is better)
Translates to: SLDTGRKTLPRP*PNPTIQDSSGW
Trigger: CCATCCAGAGGAATCTTGGATGGTGGGATTTGGGCATGGTCTTGGCAAGGTCTTTCTCCCAGTGTCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598364.1
CDS CAA 72 bp TCCTGGACCTGTTTGAGCACTGTGATCTTTGAGTCATaGGTGATCAGCGCCGCCTGGTTCAGAAGATCCACC +
Preference number: 6 (lower is better)
Translates to: SWTCLSTVIFES*VISAAWFRRST
Trigger: GGTGGATCTTCTGAACCAGGCGGCGCTGATCACCAATGACTCAAAGATCACAGTGCTCAAACAGGTCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593959.1
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS CAA 90 bp ATGATCAGCTCCTGGACCTGTTTGAGCACTGTGATCTTTGAGTCATaGGTGATCAGCGCCGCCTGGTTCAGAAGATCCACCACCCTCTCT +
Preference number: 6 (lower is better)
Translates to: MISSWTCLSTVIFES*VISAAWFRRSTTLS
Trigger: AGAGAGGGTGGTGGATCTTCTGAACCAGGCGGCGCTGATCACCAATGACTCAAAGATCACAGTGCTCAAACAGGTCCAGGAGCTGATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS CAA 90 bp ATGATCAGCTCCTGGACCTGTTTGAGCACTGTGATCTTTGAGTCATaGGTGATCAGCGCCGCCTGGTTCAGAAGATCCACCACCTGGAAG +
Preference number: 6 (lower is better)
Translates to: MISSWTCLSTVIFES*VISAAWFRRSTTWK
Trigger: CTTCCAGGTGGTGGATCTTCTGAACCAGGCGGCGCTGATCACCAATGACTCAAAGATCACAGTGCTCAAACAGGTCCAGGAGCTGATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593959.1
CDS CAA 90 bp AACAGGTGCAGCTTCAGATTCTTACGCACACTGCTCACCTGCGATTaGGCCAGCGTCGGGGGCAGGTTGGCCTCTCTTTTAGTAAATACA +
Preference number: 6 (lower is better)
Translates to: NRCSFRFLRTLLTCD*ASVGGRLASLLVNT
Trigger: TGTATTTACTAAAAGAGAGGCCAACCTGCCCCCGACGCTGGCCAAATCGCAGGTGAGCAGTGTGCGTAAGAATCTGAAGCTGCACCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596518.1
CDS TCA 72 bp GGCGGCTGGATGATCTGGGCAGAGACTGCACCTCTCTaGAACTCATTTCTTCCGTTTGTCAAACAGGGATTC +
Preference number: 6 (lower is better)
Translates to: GGWMIWAETAPL*NSFLPFVKQGF
Trigger: GAATCCCTGTTTGACAAACGGAAGAAATGAGTTTCAGAGAGGTGCAGTCTCTGCCCAGATCATCCAGCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS GCA 72 bp CAGGTCTCCGTGTGTCCCCTCTCTCCATCTGGGATATaGTTTGGACTGGGCACCACAGCAAACTTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: QVSVCPLSPSGI*FGLGTTANFLF
Trigger: AAAAAGAAAGTTTGCTGTGGTGCCCAGTCCAAAGCATATCCCAGATGGAGAGAGGGGACACACGGAGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000599814.5
ENST00000600237.5
ENST00000601600.1
CDS CAA 90 bp AGAGCATTCCAGGTGGACAGAACAGGAAGCACCAGCGCCCTGAATTaGACATGTTCGAGGAACAGACAGAAGGCCAATGTGGCTAATGTT +
Preference number: 6 (lower is better)
Translates to: RAFQVDRTGSTSALN*TCSRNRQKANVANV
Trigger: AACATTAGCCACATTGGCCTTCTGTCTGTTCCTCGAACATGTCAAATTCAGGGCGCTGGTGCTTCCTGTTCTGTCCACCTGGAATGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS CAA 90 bp TCACCTTTGATGATGGATTTCATGTCGCACTTCACGGAGTCAATGTaGTGTAATGCGATCAGGAGCTCTCCAGGGTTCAGCGGGGACAAG +
Preference number: 6 (lower is better)
Translates to: SPLMMDFMSHFTESM*CNAIRSSPGFSGDK
Trigger: CTTGTCCCCGCTGAACCCTGGAGAGCTCCTGATCGCATTACACAACATTGACTCCGTGAAGTGCGACATGAAATCCATCATCAAAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599460.5
ENST00000599814.5
CDS TCA 72 bp GTTATTTACAGATGGGAAAATGGCAGAGAGAGGGAGTaGCAAAGCCACGCAGAGCAAGCTCAGAGCAAGTGG +
Preference number: 6 (lower is better)
Translates to: VIYRWENGRERE*QSHAEQAQSKW
Trigger: CCACTTGCTCTGAGCTTGCTCTGCGTGGCTTTGTCACTCCCTCTCTCTGCCATTTTCCCATCTGTAAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS TCA 72 bp TGCTTGTTCAAGCCCCTGCTTATAAAGCTTTGGAGGTaGACAGAACAGGGTTCAAAAGCTGGCGGCTGGATG +
Preference number: 6 (lower is better)
Translates to: CLFKPLLIKLWR*TEQGSKAGGWM
Trigger: CATCCAGCCGCCAGCTTTTGAACCCTGTTCTGTTCACCTCCAAAGCTTTATAAGCAGGGGCTTGAACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS GCA 72 bp GAGTCAGAGAGAACCTATTCCAGACTTCCTTCTGTCTaGATCTCAGTTACACACACACACGCACACGCACAC +
Preference number: 6 (lower is better)
Translates to: ESERTYSRLPSV*ISVTHTHAHAH
Trigger: GTGTGCGTGTGCGTGTGTGTGTGTAACTGAGATGCAGACAGAAGGAAGTCTGGAATAGGTTCTCTCTGACTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598896.5
CDS CCA 72 bp GTTGGCTGTGAGGAAAGTGGCAGGAGCTGTGTCTTGTaGAAGATCTCATGGCATGCTGCCAGTCTTAATTCT +
Preference number: 6 (lower is better)
Translates to: VGCEESGRSCVL*KISWHAASLNS
Trigger: AGAATTAAGACTGGCAGCATGCCATGAGATCTTCCACAAGACACAGCTCCTGCCACTTTCCTCACAGCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601582.1
CDS CAA 72 bp TCATCCAGGAAGTTGTCCAGTAGTGTGGGGTCTTTGTaGATGATCAGCTCCTGGACCTGTTTGAGCACTGTG +
Preference number: 6 (lower is better)
Translates to: SSRKLSSSVGSL*MISSWTCLSTV
Trigger: CACAGTGCTCAAACAGGTCCAGGAGCTGATCATCAACAAAGACCCCACACTACTGGACAACTTCCTGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593959.1
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS CAA 72 bp ATATGGTGGCCTCAAAAGGCCGCTTTGAAGTTACAGTaGAGTACACTGGTGGATGAGAAGGAGCCACCCACA +
Preference number: 6 (lower is better)
Translates to: IWWPQKAALKLQ*STLVDEKEPPT
Trigger: TGTGGGTGGCTCCTTCTCATCCACCAGTGTACTCAACTGTAACTTCAAAGCGGCCTTTTGAGGCCACCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS TCA 72 bp ATGGGGTGTAGAGAAGTCTATCTCCAGGCCCATGGGTaGGCACTGTTATTTACAGATGGGAAAATGGCAGAG +
Preference number: 6 (lower is better)
Translates to: MGCREVYLQAHG*ALLFTDGKMAE
Trigger: CTCTGCCATTTTCCCATCTGTAAATAACAGTGCTCACCCATGGGCCTGGAGATAGACTTCTCTACACCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593504.5
CDS CAA 72 bp ATCTCATCCAGGAAGTTGTCCAGTAGTGTGGGGTCTTaGTTGATGATCAGCTCCTGGACCTGTTTGAGCACT +
Preference number: 6 (lower is better)
Translates to: ISSRKLSSSVGS*LMISSWTCLST
Trigger: AGTGCTCAAACAGGTCCAGGAGCTGATCATCAACAAAGACCCCACACTACTGGACAACTTCCTGGATGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593959.1
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS CAA 90 bp GCCTCCTCGATGAAGCCGATGACAAATTTTCGCACTTCGATTGACTaGTCTGCTTGGAATGCGATGATCTCATCCAGGAAGTTGTCCAGT +
Preference number: 6 (lower is better)
Translates to: ASSMKPMTNFRTSID*SAWNAMISSRKLSS
Trigger: ACTGGACAACTTCCTGGATGAGATCATCGCATTCCAAGCAGACAAGTCAATCGAAGTGCGAAAATTTGTCATCGGCTTCATCGAGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593959.1
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS CAA 90 bp CATGCTGCCAGTCTTAATTCTCAACCCCAAACTTGGGCAGTGGTCTaGCAGGCATCTACTAGAAAAGTTCCTTCACCCTCAGATCTAACG +
Preference number: 6 (lower is better)
Translates to: HAASLNSQPQTWAVV*QASTRKVPSPSDLT
Trigger: CGTTAGATCTGAGGGTGAAGGAACTTTTCTAGTAGATGCCTGCAAGACCACTGCCCAAGTTTGGGGTTGAGAATTAAGACTGGCAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601582.1
CDS CAA 90 bp AATGCGATGATCTCATCCAGGAAGTTGTCCAGTAGTGTGGGGTCTTaGTTGATGATCAGCTCCTGGACCTGTTTGAGCACTGTGATCTTT +
Preference number: 6 (lower is better)
Translates to: NAMISSRKLSSSVGS*LMISSWTCLSTVIF
Trigger: AAAGATCACAGTGCTCAAACAGGTCCAGGAGCTGATCATCAACAAAGACCCCACACTACTGGACAACTTCCTGGATGAGATCATCGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593959.1
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS CAA 90 bp ATAGCCTTCTTCACCACGTTCACATTCTCGTCCCTCAAGAGCATGTaGAGGTTTGCAATGAGTTTCAGCAGCAACTCAATGTCTCGCTTG +
Preference number: 6 (lower is better)
Translates to: IAFFTTFTFSSLKSM*RFAMSFSSNSMSRL
Trigger: CAAGCGAGACATTGAGTTGCTGCTGAAACTCATTGCAAACCTCAACATGCTCTTGAGGGACGAGAATGTGAACGTGGTGAAGAAGGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS GCA 72 bp GTCTTAATTCTCAACCCCAAACTTGGGCAGTGGTCTTaGAGGCATCTACTAGAAAAGTTCCTTCACCCTCAG +
Preference number: 6 (lower is better)
Translates to: VLILNPKLGQWS*RHLLEKFLHPQ
Trigger: CTGAGGGTGAAGGAACTTTTCTAGTAGATGCCTGCAAGACCACTGCCCAAGTTTGGGGTTGAGAATTAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601582.1
CDS CAA 72 bp CTCCATCTCTGGTCTGGAAATTCACATATGCTTCGCTaGGGGAGGGTTATAATCACCACTTTTGCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: LHLWSGNSHMLR*GRVIITTFASR
Trigger: TCTGGAGGCAAAAGTGGTGATTATAACCCTCCCCAAGCGAAGCATATGTGAATTTCCAGACCAGAGATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596518.1
CDS TCA 72 bp CTCGATGAAGCCGATGACAAATTTTCGCACTTCGATTaGCTTGTCTGCTTGGAATGCGATGATCTCATCCAG +
Preference number: 6 (lower is better)
Translates to: LDEADDKFSHFD*LVCLECDDLIQ
Trigger: CTGGATGAGATCATCGCATTCCAAGCAGACAAGTCAATCGAAGTGCGAAAATTTGTCATCGGCTTCATCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593959.1
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS GCA 72 bp GTTCACATTCTCGTCCCTCAAGAGCATGTTGAGGTTTaGAATGAGTTTCAGCAGCAACTCAATGTCTCGCTT +
Preference number: 6 (lower is better)
Translates to: VHILVPQEHVEV*NEFQQQLNVSL
Trigger: AAGCGAGACATTGAGTTGCTGCTGAAACTCATTGCAAACCTCAACATGCTCTTGAGGGACGAGAATGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS CAA 72 bp TTCACCACGTTCACATTCTCGTCCCTCAAGAGCATGTaGAGGTTTGCAATGAGTTTCAGCAGCAACTCAATG +
Preference number: 6 (lower is better)
Translates to: FTTFTFSSLKSM*RFAMSFSSNSM
Trigger: CATTGAGTTGCTGCTGAAACTCATTGCAAACCTCAACATGCTCTTGAGGGACGAGAATGTGAACGTGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS CAA 72 bp AGTCTTAATTCTCAACCCCAAACTTGGGCAGTGGTCTaGCAGGCATCTACTAGAAAAGTTCCTTCACCCTCA +
Preference number: 6 (lower is better)
Translates to: SLNSQPQTWAVV*QASTRKVPSPS
Trigger: TGAGGGTGAAGGAACTTTTCTAGTAGATGCCTGCAAGACCACTGCCCAAGTTTGGGGTTGAGAATTAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601582.1
CDS CAA 72 bp ATGAAGCCGATGACAAATTTTCGCACTTCGATTGACTaGTCTGCTTGGAATGCGATGATCTCATCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: MKPMTNFRTSID*SAWNAMISSRK
Trigger: CTTCCTGGATGAGATCATCGCATTCCAAGCAGACAAGTCAATCGAAGTGCGAAAATTTGTCATCGGCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593959.1
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS CCA 72 bp ATGACAAATTTTCGCACTTCGATTGACTTGTCTGCTTaGAATGCGATGATCTCATCCAGGAAGTTGTCCAGT +
Preference number: 6 (lower is better)
Translates to: MTNFRTSIDLSA*NAMISSRKLSS
Trigger: ACTGGACAACTTCCTGGATGAGATCATCGCATTCCAAGCAGACAAGTCAATCGAAGTGCGAAAATTTGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000245934.12
ENST00000593504.5
ENST00000593959.1
ENST00000594293.5
ENST00000598059.5
ENST00000598896.5
ENST00000599460.5
ENST00000599814.5
ENST00000600237.5
ENST00000602061.5
CDS CCA 72 bp AAATACATACAATTTCGTCCTCCTCCATCTCTGGTCTaGAAATTCACATATGCTTCGCTTGGGGAGGGTTAT +
Preference number: 6 (lower is better)
Translates to: KYIQFRPPPSLV*KFTYASLGEGY
Trigger: ATAACCCTCCCCAAGCGAAGCATATGTGAATTTCCAGACCAGAGATGGAGGAGGACGAAATTGTATGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596518.1
CDS CCA 72 bp TTAGTAAATACATACAATTTCGTCCTCCTCCATCTCTaGTCTGGAAATTCACATATGCTTCGCTTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: LVNTYNFVLLHL*SGNSHMLRLGR
Trigger: CCTCCCCAAGCGAAGCATATGTGAATTTCCAGACCAGAGATGGAGGAGGACGAAATTGTATGTATTTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596518.1