Pregenerated sensors for SYF2 (Homo sapiens)
Ensembl gene IDs: ENSG00000117614Ensembl transcript IDs: ENST00000236273.9, ENST00000354361.3, ENST00000474160.1, ENST00000476231.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTAGACTCTATCAAATTCCACACTGATAGCAACAATGACTGCATCTaGTGTGTGCTGCTGGCAATCTTAAGCCCAAAATGCTTCAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: LDSIKFHTDSNNDCI*CVLLAILSPKCFKD Trigger: ATCTTTGAAGCATTTTGGGCTTAAGATTGCCAGCAGCACACATCAGATGCAGTCATTGTTGCTATCAGTGTGGAATTTGATAGAGTCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| 3UTR CAA 90 bp | GTCCTCCGGTGGCCACTGCCATCTTCCTCATCACTGTCCTTAGCTTaGGAGTACACAACTCCAAGTGGCCCGAGTCTAGACTCTATCAAA | + |
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Preference number: 2 (lower is better) Translates to: VLRWPLPSSSSLSLA*EYTTPSGPSLDSIK Trigger: TTTGATAGAGTCTAGACTCGGGCCACTTGGAGTTGTGTACTCCAAAGCTAAGGACAGTGATGAGGAAGATGGCAGTGGCCACCGGAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGTACTGGGTATATGGGACTCACCAGGGGTATTGGGTGTATGGAATTTCCCATCCTCCGGTGGCCACTaGCATCTTCCTCATCACTGT | + |
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Preference number: 2 (lower is better) Translates to: RVLGIWDSPGVLGVWNFPSSGGH*HLPHHC Trigger: ACAGTGATGAGGAAGATGGCAGTGGCCACCGGAGGA...TGGGAAATTCCATACACCCAATACCCCTGGTGAGTCCCATATACCCAGTACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGTATATGGGACTCACCAGGGGTATTGGGTGTATGGAATTTCCCATAATAGCTCCAGTCCTCCGGTaGCCACTGCCATCTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: TGYMGLTRGIGCMEFPIIAPVLR*PLPSSS Trigger: TGAGGAAGATGGCAGTGGCCACCGGAGGACTGGAGC...TATTATGGGAAATTCCATACACCCAATACCCCTGGTGAGTCCCATATACCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGTACTGGGTATATGGGACTCACCAGGGGTATTGGGTGTATGGAATTTCCCACTGAGTGAGAAGGCATaGACTACTAAATTCTGGATT | + |
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Preference number: 2 (lower is better) Translates to: RVLGIWDSPGVLGVWNFPLSEKA*TTKFWI Trigger: AATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAG...TGGGAAATTCCATACACCCAATACCCCTGGTGAGTCCCATATACCCAGTACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGTATATGGGACTCACCAGGGGTATTGGGTGTATGGAATTTCCCATAATAGTACACAACTCCAAGTaGCCCGAGTCTAGACTCTAT | + |
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Preference number: 2 (lower is better) Translates to: TGYMGLTRGIGCMEFPIIVHNSK*PESRLY Trigger: ATAGAGTCTAGACTCGGGCCACTTGGAGTTGTGTAC...TATTATGGGAAATTCCATACACCCAATACCCCTGGTGAGTCCCATATACCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGTATATGGGACTCACCAGGGGTATTGGGTGTATGGAATTTCCCATAATATACATGATCAGATCATaGAAGGATAGCTCCACTCCT | + |
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Preference number: 2 (lower is better) Translates to: TGYMGLTRGIGCMEFPIIYMIRS*KDSSTP Trigger: AGGAGTGGAGCTATCCTTCCATGATCTGATCATGTA...TATTATGGGAAATTCCATACACCCAATACCCCTGGTGAGTCCCATATACCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| 3UTR-3UTR CAA 90 bp | TTAATGATTGTTGAACAGGGTACTGGGTATATGGGACTCACCAGGGGTATTGGGTCACTGTCCTTAGCTTaGGAGTACACAACTCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: LMIVEQGTGYMGLTRGIGSLSLA*EYTTPS Trigger: ACTTGGAGTTGTGTACTCCAAAGCTAAGGACAGTGA...CCCAATACCCCTGGTGAGTCCCATATACCCAGTACCCTGTTCAACAATCATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR TCA 90 bp | ACTGGGTATATGGGACTCACCAGGGGTATTGGGTGTATGGAATTTCCCATAATACTCTGTTCGCGCTTCTaGGCGGCCAGCTCCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: TGYMGLTRGIGCMEFPIILCSRF*AASSAA Trigger: GGCGGCGGAGCTGGCCGCTCAGAAGCGCGAACAGAG...TATTATGGGAAATTCCATACACCCAATACCCCTGGTGAGTCCCATATACCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR GCA 90 bp | TGCTCCAGTCCTCCGGTGGCCACTGCCATCTTCCTCATCACTGTCCTTAGCTTTTCATTCCGCATCAGGTaGAGCTCCCGGAATTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: CSSPPVATAIFLITVLSFSFRIR*SSRNLR Trigger: GCGCAAATTCCGGGAGCTGCACCTGATGCGGAATGA...AAAGCTAAGGACAGTGATGAGGAAGATGGCAGTGGCCACCGGAGGACTGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR CCA 90 bp | GCCATCTTCCTCATCACTGTCCTTAGCTTTGGAGTACACAACTCCAAGTGGCCCGCTCCAGTCCTCCGGTaGCCACTGCCATCTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: AIFLITVLSFGVHNSKWPAPVLR*PLPSSS Trigger: TGAGGAAGATGGCAGTGGCCACCGGAGGACTGGAGC...GGGCCACTTGGAGTTGTGTACTCCAAAGCTAAGGACAGTGATGAGGAAGATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR TCA 90 bp | AGTGGCCCGAGTCTAGACTCTATCAAATTCCACACTGATAGCAACAATGACTGCGGTCACAGGCCGCCATaGGGAGGGACTGCTCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SGPSLDSIKFHTDSNNDCGHRPP*GGTAPV Trigger: GACTGGAGCAGTCCCTCCTCATGGCGGCCTGTGACC...GCAGTCATTGTTGCTATCAGTGTGGAATTTGATAGAGTCTAGACTCGGGCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR GCA 90 bp | TCTTCCTCATCACTGTCCTTAGCTTTGGAGTACACAACTCCAAGTGGCCCGAGTGCAGCTCCCGGAATTTaGGCAGTCTCTGTTCGCGCT | + |
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Preference number: 4 (lower is better) Translates to: SSSSLSLALEYTTPSGPSAAPGI*AVSVRA Trigger: AGCGCGAACAGAGACTGCGCAAATTCCGGGAGCTGC...ACTCGGGCCACTTGGAGTTGTGTACTCCAAAGCTAAGGACAGTGATGAGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| 3UTR CAA 72 bp | TGGCCACTGCCATCTTCCTCATCACTGTCCTTAGCTTaGGAGTACACAACTCCAAGTGGCCCGAGTCTAGAC | + |
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Preference number: 4 (lower is better) Translates to: WPLPSSSSLSLA*EYTTPSGPSLD Trigger: GTCTAGACTCGGGCCACTTGGAGTTGTGTACTCCAAAGCTAAGGACAGTGATGAGGAAGATGGCAGTGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR TCA 90 bp | TGCTCCAGTCCTCCGGTGGCCACTGCCATCTTCCTCATCACTGTCCTTAGCTTTCTGCATCTTCTGCACTaGTCTCCAGCAACTTCACTT | + |
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Preference number: 4 (lower is better) Translates to: CSSPPVATAIFLITVLSFLHLLH*SPATSL Trigger: AAGTGAAGTTGCTGGAGATCAGTGCAGAAGATGCAG...AAAGCTAAGGACAGTGATGAGGAAGATGGCAGTGGCCACCGGAGGACTGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR CCA 90 bp | ACTGGGTATATGGGACTCACCAGGGGTATTGGGTGTATGGAATTTCCCATAATAACTCCTCCCCGACCTTaGTCACAGGCCGCCATGAGG | + |
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Preference number: 4 (lower is better) Translates to: TGYMGLTRGIGCMEFPIITPPRP*SQAAMR Trigger: CCTCATGGCGGCCTGTGACCAAGGTCGGGGAGGAGT...TATTATGGGAAATTCCATACACCCAATACCCCTGGTGAGTCCCATATACCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR TCA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCACTCTGTTCGCGCTTCTaGGCGGCCAGCTCCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: MLSEKAWTTKFWITDKISLCSRF*AASSAA Trigger: GGCGGCGGAGCTGGCCGCTCAGAAGCGCGAACAGAG...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000236273.9 ENST00000354361.3 |
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| CDS-3UTR GCA 90 bp | AGTGGCCCGAGTCTAGACTCTATCAAATTCCACACTGATAGCAACAATGACTGCTCCTCCGGTGGCCACTaGCATCTTCCTCATCACTGT | + |
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Preference number: 4 (lower is better) Translates to: SGPSLDSIKFHTDSNNDCSSGGH*HLPHHC Trigger: ACAGTGATGAGGAAGATGGCAGTGGCCACCGGAGGA...GCAGTCATTGTTGCTATCAGTGTGGAATTTGATAGAGTCTAGACTCGGGCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR TCA 90 bp | TCTTCCTCATCACTGTCCTTAGCTTTGGAGTACACAACTCCAAGTGGCCCGAGTGGCAGCAGCATAATCTaGAAATCCCAGATCAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: SSSSLSLALEYTTPSGPSGSSII*KSQIRV Trigger: AACCCTGATCTGGGATTTTCAGATTATGCTGCTGCC...ACTCGGGCCACTTGGAGTTGTGTACTCCAAAGCTAAGGACAGTGATGAGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR CCA 90 bp | TCTTCCTCATCACTGTCCTTAGCTTTGGAGTACACAACTCCAAGTGGCCCGAGTGTACACAACTCCAAGTaGCCCGAGTCTAGACTCTAT | + |
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Preference number: 4 (lower is better) Translates to: SSSSLSLALEYTTPSGPSVHNSK*PESRLY Trigger: ATAGAGTCTAGACTCGGGCCACTTGGAGTTGTGTAC...ACTCGGGCCACTTGGAGTTGTGTACTCCAAAGCTAAGGACAGTGATGAGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR CCA 90 bp | AGGGTACTGGGTATATGGGACTCACCAGGGGTATTGGGTGTATGGAATTTCCCAACTCACCAGGGGTATTaGGTGTATGGAATTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: RVLGIWDSPGVLGVWNFPTHQGY*VYGISH Trigger: ATGGGAAATTCCATACACCCAATACCCCTGGTGAGT...TGGGAAATTCCATACACCCAATACCCCTGGTGAGTCCCATATACCCAGTACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR CCA 90 bp | TTAATGATTGTTGAACAGGGTACTGGGTATATGGGACTCACCAGGGGTATTGGGAGGGTACTGGGTATATaGGACTCACCAGGGGTATTG | + |
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Preference number: 4 (lower is better) Translates to: LMIVEQGTGYMGLTRGIGRVLGI*DSPGVL Trigger: CAATACCCCTGGTGAGTCCCATATACCCAGTACCCT...CCCAATACCCCTGGTGAGTCCCATATACCCAGTACCCTGTTCAACAATCATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR TCA 90 bp | TCTTCCTCATCACTGTCCTTAGCTTTGGAGTACACAACTCCAAGTGGCCCGAGTAAAGGGAACTGTACATaGTCAGATCATGGAAGGATA | + |
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Preference number: 4 (lower is better) Translates to: SSSSLSLALEYTTPSGPSKGNCT*SDHGRI Trigger: TATCCTTCCATGATCTGATCATGTACAGTTCCCTTT...ACTCGGGCCACTTGGAGTTGTGTACTCCAAAGCTAAGGACAGTGATGAGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR CCA 90 bp | ATGATTGTTGAACAGGGTACTGGGTATATGGGACTCACCAGGGGTATTGGGTGTTGTCAATTTCCTCTGTaGAAGGCACATGTGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: MIVEQGTGYMGLTRGIGCCQFPL*KAHVFH Trigger: ATGGAACACATGTGCCTTCCACAGAGGAAATTGACA...ACACCCAATACCCCTGGTGAGTCCCATATACCCAGTACCCTGTTCAACAATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR TCA 90 bp | AGTGGCCCGAGTCTAGACTCTATCAAATTCCACACTGATAGCAACAATGACTGCGGCACATGTGTTCCATaGAGAAGACTATTGGATGTT | + |
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Preference number: 4 (lower is better) Translates to: SGPSLDSIKFHTDSNNDCGTCVP*RRLLDV Trigger: AACATCCAATAGTCTTCTTCATGGAACACATGTGCC...GCAGTCATTGTTGCTATCAGTGTGGAATTTGATAGAGTCTAGACTCGGGCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR GCA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCAGCAGCTCCCGGAATTTaGGCAGTCTCTGTTCGCGCT | + |
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Preference number: 4 (lower is better) Translates to: MLSEKAWTTKFWITDKISAAPGI*AVSVRA Trigger: AGCGCGAACAGAGACTGCGCAAATTCCGGGAGCTGC...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000236273.9 ENST00000354361.3 |
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| CDS-3UTR GCA 90 bp | TTAATGATTGTTGAACAGGGTACTGGGTATATGGGACTCACCAGGGGTATTGGGTCTTTCTGCATCTTCTaGACTGATCTCCAGCAACTT | + |
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Preference number: 4 (lower is better) Translates to: LMIVEQGTGYMGLTRGIGSFCIF*TDLQQL Trigger: AAGTTGCTGGAGATCAGTGCAGAAGATGCAGAAAGA...CCCAATACCCCTGGTGAGTCCCATATACCCAGTACCCTGTTCAACAATCATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR GCA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCACATTCCCGCATCAGGTaGAGCTCCCGGAATTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: MLSEKAWTTKFWITDKISHSRIR*SSRNLR Trigger: GCGCAAATTCCGGGAGCTGCACCTGATGCGGGAATG...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354361.3 |
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| CDS-3UTR CCA 90 bp | AGTGGCCCGAGTCTAGACTCTATCAAATTCCACACTGATAGCAACAATGACTGCTACATGATCAGATCATaGAAGGATAGCTCCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: SGPSLDSIKFHTDSNNDCYMIRS*KDSSTP Trigger: AGGAGTGGAGCTATCCTTCCATGATCTGATCATGTA...GCAGTCATTGTTGCTATCAGTGTGGAATTTGATAGAGTCTAGACTCGGGCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR GCA 90 bp | ATGATTGTTGAACAGGGTACTGGGTATATGGGACTCACCAGGGGTATTGGGTGTAATGTAGTCGATATCTaGATCATCATTATAAGGACG | + |
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Preference number: 4 (lower is better) Translates to: MIVEQGTGYMGLTRGIGCNVVDI*IIIIRT Trigger: CGTCCTTATAATGATGATGCAGATATCGACTACATT...ACACCCAATACCCCTGGTGAGTCCCATATACCCAGTACCCTGTTCAACAATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR CCA 90 bp | AGTGGCCCGAGTCTAGACTCTATCAAATTCCACACTGATAGCAACAATGACTGCAAGACTATTGGATGTTaGGAAAAACTCTTCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: SGPSLDSIKFHTDSNNDCKTIGC*EKLFSM Trigger: CATGGAGAAGAGTTTTTCCCAACATCCAATAGTCTT...GCAGTCATTGTTGCTATCAGTGTGGAATTTGATAGAGTCTAGACTCGGGCCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR CCA 90 bp | ACTGGGTATATGGGACTCACCAGGGGTATTGGGTGTATGGAATTTCCCATAATACTGAGTGAGAAGGCATaGACTACTAAATTCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: TGYMGLTRGIGCMEFPIILSEKA*TTKFWI Trigger: AATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAG...TATTATGGGAAATTCCATACACCCAATACCCCTGGTGAGTCCCATATACCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR GCA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCAATAGTCTTCTCCTCTTaGCGCACATTCCCGCATCAG | + |
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Preference number: 4 (lower is better) Translates to: MLSEKAWTTKFWITDKISIVFSS*RTFPHQ Trigger: CTGATGCGGGAATGTGCGGCAAGAGGAGAAGACTAT...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354361.3 |
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| CDS-3UTR TCA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCACTGCATCTTCTGCACTaGTCTCCAGCAACTTCACTT | + |
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Preference number: 4 (lower is better) Translates to: MLSEKAWTTKFWITDKISLHLLH*SPATSL Trigger: AAGTGAAGTTGCTGGAGATCAGTGCAGAAGATGCAG...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000236273.9 ENST00000354361.3 |
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| CDS-3UTR TCA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCAGGCACATGTGTTCCATaGAGAAGACTATTGGATGTT | + |
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Preference number: 4 (lower is better) Translates to: MLSEKAWTTKFWITDKISGTCVP*RRLLDV Trigger: AACATCCAATAGTCTTCTTCATGGAACACATGTGCC...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000236273.9 ENST00000354361.3 |
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| CDS-3UTR GCA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCATCTTTCTGCATCTTCTaGACTGATCTCCAGCAACTT | + |
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Preference number: 4 (lower is better) Translates to: MLSEKAWTTKFWITDKISSFCIF*TDLQQL Trigger: AAGTTGCTGGAGATCAGTGCAGAAGATGCAGAAAGA...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000236273.9 ENST00000354361.3 |
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| CDS-3UTR CCA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCATGTCAATTTCCTCTGTaGAAGGCACATGTGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: MLSEKAWTTKFWITDKISCQFPL*KAHVFH Trigger: ATGGAACACATGTGCCTTCCACAGAGGAAATTGACA...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000236273.9 ENST00000354361.3 |
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| CDS-3UTR TCA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCAGTTTTTCCAGATCTATaGCCATCCTGTCAATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: MLSEKAWTTKFWITDKISVFPDL*PSCQFP Trigger: AGGAAATTGACAGGATGGTCATAGATCTGGAAAAAC...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000236273.9 ENST00000354361.3 |
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| CDS-3UTR CCA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCAAAGACTATTGGATGTTaGGAAAAACTCTTCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: MLSEKAWTTKFWITDKISKTIGC*EKLFSM Trigger: CATGGAGAAGAGTTTTTCCCAACATCCAATAGTCTT...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000236273.9 ENST00000354361.3 |
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| CDS-3UTR GCA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCAAATGTAGTCGATATCTaGATCATCATTATAAGGACG | + |
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Preference number: 4 (lower is better) Translates to: MLSEKAWTTKFWITDKISNVVDI*IIIIRT Trigger: CGTCCTTATAATGATGATGCAGATATCGACTACATT...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000236273.9 ENST00000354361.3 |
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| CDS GCA 90 bp | GCCGCCGCAGCGAGGGACCCCTCCTCCGCGCTGTCCACCAGCACCTaGGACAAGGAGAACTGGCTTCAGGCAGAGCCGGCTCAGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: AAAARDPSSALSTST*DKENWLQAEPAQLL Trigger: GAGAAGCTGAGCCGGCTCTGCCTGAAGCCAGTTCTCCTTGTCGCAGGTGCTGGTGGACAGCGCGGAGGAGGGGTCCCTCGCTGCGGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474160.1 |
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| CDS CCA 90 bp | GCAGTGGTGTGGCTTCCTCGTCCCCTCTACAAAAGCGCACAGGCTTaGCCAGATGACGGATCTAAGCCGGCCTCCAAGACTACTCACCCG | + |
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Preference number: 5 (lower is better) Translates to: AVVWLPRPLYKSAQA*PDDGSKPASKTTHP Trigger: CGGGTGAGTAGTCTTGGAGGCCGGCTTAGATCCGTCATCTGGCCAAGCCTGTGCGCTTTTGTAGAGGGGACGAGGAAGCCACACCACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CCA 90 bp | GCTTTCCTCTCAGATGATCCTGCTCTGTTGGTCTGTCAGACGCAGTaGTGTGGCTTCCTCGTCCCCTCTACAAAAGCGCACAGGCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: AFLSDDPALLVCQTQ*CGFLVPSTKAHRLG Trigger: GCCAAGCCTGTGCGCTTTTGTAGAGGGGACGAGGAAGCCACACCACTGCGTCTGACAGACCAACAGAGCAGGATCATCTGAGAGGAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CCA 90 bp | GAGTACCACCGAACAGAGCTTTCCTCTCAGATGATCCTGCTCTGTTaGTCTGTCAGACGCAGTGGTGTGGCTTCCTCGTCCCCTCTACAA | + |
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Preference number: 5 (lower is better) Translates to: EYHRTELSSQMILLC*SVRRSGVASSSPLQ Trigger: TTGTAGAGGGGACGAGGAAGCCACACCACTGCGTCTGACAGACCAACAGAGCAGGATCATCTGAGAGGAAAGCTCTGTTCGGTGGTACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS-3UTR CAA 90 bp | AGGGTACTGGGTATATGGGACTCACCAGGGGTATTGGGTGTATGGAATTTCCCATGCAGCTCCCGGAATTaGCGCAGTCTCTGTTCGCGC | + |
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Preference number: 5 (lower is better) Translates to: RVLGIWDSPGVLGVWNFPCSSRN*RSLCSR Trigger: GCGCGAACAGAGACTGCGCAAATTCCGGGAGCTGCA...TGGGAAATTCCATACACCCAATACCCCTGGTGAGTCCCATATACCCAGTACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR CAA 90 bp | ATGATTGTTGAACAGGGTACTGGGTATATGGGACTCACCAGGGGTATTGGGTGTGACTCACCAGGGGTATaGGGTGTATGGAATTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: MIVEQGTGYMGLTRGIGCDSPGV*GVWNFP Trigger: TGGGAAATTCCATACACCCAATACCCCTGGTGAGTC...ACACCCAATACCCCTGGTGAGTCCCATATACCCAGTACCCTGTTCAACAATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS CCA 90 bp | GAGAGATACTCCTCCCAACTACCATCCCTAGTATATTCTTGGCCCTaGAAAAGCCCTGCAATTAAAGACGCCAAGAACATACCTACGGTC | + |
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Preference number: 5 (lower is better) Translates to: ERYSSQLPSLVYSWP*KSPAIKDAKNIPTV Trigger: GACCGTAGGTATGTTCTTGGCGTCTTTAATTGCAGGGCTTTTCCAGGGCCAAGAATATACTAGGGATGGTAGTTGGGAGGAGTATCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CCA 90 bp | GGCAAAGAGAGATACTCCTCCCAACTACCATCCCTAGTATATTCTTaGCCCTGGAAAAGCCCTGCAATTAAAGACGCCAAGAACATACCT | + |
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Preference number: 5 (lower is better) Translates to: GKERYSSQLPSLVYS*PWKSPAIKDAKNIP Trigger: AGGTATGTTCTTGGCGTCTTTAATTGCAGGGCTTTTCCAGGGCCAAGAATATACTAGGGATGGTAGTTGGGAGGAGTATCTCTCTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS-3UTR CAA 90 bp | AGGGTACTGGGTATATGGGACTCACCAGGGGTATTGGGTGTATGGAATTTCCCACGTCTCCGGCTATATTaGTCTCGTTTTTCAATCTGT | + |
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Preference number: 5 (lower is better) Translates to: RVLGIWDSPGVLGVWNFPRLRLY*SRFSIC Trigger: ACAGATTGAAAAACGAGACAAATATAGCCGGAGACG...TGGGAAATTCCATACACCCAATACCCCTGGTGAGTCCCATATACCCAGTACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS GCA 90 bp | CTCCATGGTGAAACAGGGGCTGCTTTTCTCTTTCTCTGCTCCAACTaGAGCAAGCTATTTGCTGGACTCTTATCCCTAATACAAATTCTC | + |
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Preference number: 5 (lower is better) Translates to: LHGETGAAFLFLCSN*SKLFAGLLSLIQIL Trigger: GAGAATTTGTATTAGGGATAAGAGTCCAGCAAATAGCTTGCTGCAGTTGGAGCAGAGAAAGAGAAAAGCAGCCCCTGTTTCACCATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CCA 90 bp | TTGGGTTTGTATCAGGTGACTGAGGGGAGGGTTAAGGATGTGGATTaGGTACTGTCAGAAAGCAGGGGCTTTCTACAATTAGGTATCTTA | + |
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Preference number: 5 (lower is better) Translates to: LGLYQVTEGRVKDVD*VLSESRGFLQLGIL Trigger: TAAGATACCTAATTGTAGAAAGCCCCTGCTTTCTGACAGTACCCAATCCACATCCTTAACCCTCCCCTCAGTCACCTGATACAAACCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS-3UTR CAA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCATGCAGCTCCCGGAATTaGCGCAGTCTCTGTTCGCGC | + |
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Preference number: 5 (lower is better) Translates to: MLSEKAWTTKFWITDKISCSSRN*RSLCSR Trigger: GCGCGAACAGAGACTGCGCAAATTCCGGGAGCTGCA...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000236273.9 ENST00000354361.3 |
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| CDS-3UTR CAA 90 bp | TTAATGATTGTTGAACAGGGTACTGGGTATATGGGACTCACCAGGGGTATTGGGTCCAAACGAGCTTTTTaGGCTTCCCAATTTGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: LMIVEQGTGYMGLTRGIGSKRAF*ASQFAG Trigger: ACCTGCAAATTGGGAAGCCAAAAAAGCTCGTTTGGA...CCCAATACCCCTGGTGAGTCCCATATACCCAGTACCCTGTTCAACAATCATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR CAA 90 bp | AGTGGCCCGAGTCTAGACTCTATCAAATTCCACACTGATAGCAACAATGACTGCCATAGTCTTCTCCTCTaGCCGCACATTCCTTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SGPSLDSIKFHTDSNNDCHSLLL*PHIPFS Trigger: AGAAAAAGGAATGTGCGGCAAGAGGAGAAGACTATG...GCAGTCATTGTTGCTATCAGTGTGGAATTTGATAGAGTCTAGACTCGGGCCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS-3UTR CAA 90 bp | TCTTCCTCATCACTGTCCTTAGCTTTGGAGTACACAACTCCAAGTGGCCCGAGTGAAGACTATTGGATGTaGGGAAAAACTCTTCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: SSSSLSLALEYTTPSGPSEDYWM*GKTLLH Trigger: ATGGAGAAGAGTTTTTCCCAACATCCAATAGTCTTC...ACTCGGGCCACTTGGAGTTGTGTACTCCAAAGCTAAGGACAGTGATGAGGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000236273.9 |
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| CDS CCA 90 bp | TCCTCTGCACCTCCAGGGCACTTAAACATCAGATTCCCTATCAACTaGCTGAACTACCACACTGTAGACTTTCAAAAGTTTGCCATTTTT | + |
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Preference number: 5 (lower is better) Translates to: SSAPPGHLNIRFPIN*LNYHTVDFQKFAIF Trigger: AAAAATGGCAAACTTTTGAAAGTCTACAGTGTGGTAGTTCAGCCAGTTGATAGGGAATCTGATGTTTAAGTGCCCTGGAGGTGCAGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS-3UTR CAA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCACATAGTCTTCTCCTCTaGCCGCACATTCCCGCATCA | + |
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Preference number: 5 (lower is better) Translates to: MLSEKAWTTKFWITDKISHSLLL*PHIPAS Trigger: TGATGCGGGAATGTGCGGCAAGAGGAGAAGACTATG...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354361.3 |
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| CDS-3UTR CAA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCACGTCTCCGGCTATATTaGTCTCGTTTTTCAATCTGT | + |
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Preference number: 5 (lower is better) Translates to: MLSEKAWTTKFWITDKISRLRLY*SRFSIC Trigger: ACAGATTGAAAAACGAGACAAATATAGCCGGAGACG...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000236273.9 ENST00000354361.3 |
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| CDS-3UTR CAA 90 bp | ATGCTGAGTGAGAAGGCATGGACTACTAAATTCTGGATTACTGATAAAATTTCATTCTATAAACAGTTCTaGAAGGGATTAGACAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: MLSEKAWTTKFWITDKISFYKQF*KGLDSC Trigger: ACAGCTGTCTAATCCCTTCAAGAACTGTTTATAGAA...TGAAATTTTATCAGTAATCCAGAATTTAGTAGTCCATGCCTTCTCACTCAGCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000236273.9 ENST00000354361.3 |
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| CDS GCA 72 bp | GCGAGGGACCCCTCCTCCGCGCTGTCCACCAGCACCTaGGACAAGGAGAACTGGCTTCAGGCAGAGCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: ARDPSSALSTST*DKENWLQAEPA Trigger: AGCCGGCTCTGCCTGAAGCCAGTTCTCCTTGTCGCAGGTGCTGGTGGACAGCGCGGAGGAGGGGTCCCTCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474160.1 |
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| CDS CAA 72 bp | TCCCCACAGGCTGGGCCTAGGGCCTCCACCGCCGACTaGACCCCACAGTGTCTGAGCCTCCCTGAAGCGAAA | + |
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Preference number: 6 (lower is better) Translates to: SPQAGPRASTAD*TPQCLSLPEAK Trigger: TTTCGCTTCAGGGAGGCTCAGACACTGTGGGGTCAAGTCGGCGGTGGAGGCCCTAGGCCCAGCCTGTGGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474160.1 |
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| CDS CCA 72 bp | TCCGCGCTGTCCACCAGCACCTGCGACAAGGAGAACTaGCTTCAGGCAGAGCCGGCTCAGCTTCTCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SALSTSTCDKEN*LQAEPAQLLPG Trigger: TCCTGGGAGAAGCTGAGCCGGCTCTGCCTGAAGCCAGTTCTCCTTGTCGCAGGTGCTGGTGGACAGCGCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474160.1 |
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| CDS TCA 72 bp | CACCGCCGACTTGACCCCACAGTGTCTGAGCCTCCCTaGAGCGAAACTAGACTTCGCCTCCACCTCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HRRLDPTVSEPP*SETRLRLHLSP Trigger: TGGAGAGAGGTGGAGGCGAAGTCTAGTTTCGCTTCAGGGAGGCTCAGACACTGTGGGGTCAAGTCGGCGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474160.1 |
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| CDS CCA 72 bp | TGGCTTCCTCGTCCCCTCTACAAAAGCGCACAGGCTTaGCCAGATGACGGATCTAAGCCGGCCTCCAAGACT | + |
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Preference number: 6 (lower is better) Translates to: WLPRPLYKSAQA*PDDGSKPASKT Trigger: AGTCTTGGAGGCCGGCTTAGATCCGTCATCTGGCCAAGCCTGTGCGCTTTTGTAGAGGGGACGAGGAAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CCA 72 bp | TCAGATGATCCTGCTCTGTTGGTCTGTCAGACGCAGTaGTGTGGCTTCCTCGTCCCCTCTACAAAAGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: SDDPALLVCQTQ*CGFLVPSTKAH Trigger: GTGCGCTTTTGTAGAGGGGACGAGGAAGCCACACCACTGCGTCTGACAGACCAACAGAGCAGGATCATCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CCA 72 bp | CGAACAGAGCTTTCCTCTCAGATGATCCTGCTCTGTTaGTCTGTCAGACGCAGTGGTGTGGCTTCCTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: RTELSSQMILLC*SVRRSGVASSS Trigger: GGACGAGGAAGCCACACCACTGCGTCTGACAGACCAACAGAGCAGGATCATCTGAGAGGAAAGCTCTGTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CAA 72 bp | CCGAACAGAGCTTTCCTCTCAGATGATCCTGCTCTGTaGGTCTGTCAGACGCAGTGGTGTGGCTTCCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: PNRAFLSDDPAL*VCQTQWCGFLV Trigger: GACGAGGAAGCCACACCACTGCGTCTGACAGACCAACAGAGCAGGATCATCTGAGAGGAAAGCTCTGTTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CAA 72 bp | TCTCCAGCAACTTCACTTTCTCATAGTCTTCTCCTCTaGCCGCACATTCCCGCATCAGGTGCAGCTCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: SPATSLSHSLLL*PHIPASGAAPG Trigger: TCCGGGAGCTGCACCTGATGCGGGAATGTGCGGCAAGAGGAGAAGACTATGAGAAAGTGAAGTTGCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354361.3 |
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| CDS TCA 72 bp | AAGAGAGCAAACCACGGGGAACCGTGGGCATTTGAGTaGCAGGGTGTTAGGAAGGGCTTGTTCCAGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: KRANHGEPWAFE*QGVRKGLFQDL Trigger: CAAATCCTGGAACAAGCCCTTCCTAACACCCTGTCACTCAAATGCCCACGGTTCCCCGTGGTTTGCTCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS TCA 72 bp | GTGAAACCATGGCCTAGCTGTCAGGTCACTCCATGGTaGAACAGGGGCTGCTTTTCTCTTTCTCTGCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: VKPWPSCQVTPW*NRGCFSLSLLQ Trigger: TTGGAGCAGAGAAAGAGAAAAGCAGCCCCTGTTTCACCATGGAGTGACCTGACAGCTAGGCCATGGTTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CAA 72 bp | CCAAGAACATACCTACGGTCAACAAAGTTGAGTCTGTaGCACAGAAGAGAGCAAACCACGGGGAACCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: PRTYLRSTKLSL*HRREQTTGNRG Trigger: CCCACGGTTCCCCGTGGTTTGCTCTCTTCTGTGCAACAGACTCAACTTTGTTGACCGTAGGTATGTTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CAA 90 bp | TTAAAGACGCCAAGAACATACCTACGGTCAACAAAGTTGAGTCTGTaGCACAGAAGAGAGCAAACCACGGGGAACCGTGGGCATTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: LKTPRTYLRSTKLSL*HRREQTTGNRGHLS Trigger: ACTCAAATGCCCACGGTTCCCCGTGGTTTGCTCTCTTCTGTGCAACAGACTCAACTTTGTTGACCGTAGGTATGTTCTTGGCGTCTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS TCA 72 bp | AATGTTCTCAGAATGATCCCAATGTGCTGCCAGGGTTaGGTACCACCGAACAGAGCTTTCCTCTCAGATGAT | + |
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Preference number: 6 (lower is better) Translates to: NVLRMIPMCCQG*VPPNRAFLSDD Trigger: ATCATCTGAGAGGAAAGCTCTGTTCGGTGGTACTCAACCCTGGCAGCACATTGGGATCATTCTGAGAACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CCA 72 bp | TATCAGGTGACTGAGGGGAGGGTTAAGGATGTGGATTaGGTACTGTCAGAAAGCAGGGGCTTTCTACAATTA | + |
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Preference number: 6 (lower is better) Translates to: YQVTEGRVKDVD*VLSESRGFLQL Trigger: TAATTGTAGAAAGCCCCTGCTTTCTGACAGTACCCAATCCACATCCTTAACCCTCCCCTCAGTCACCTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CAA 72 bp | TTAAAGACGCCAAGAACATACCTACGGTCAACAAAGTaGAGTCTGTTGCACAGAAGAGAGCAAACCACGGGG | + |
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Preference number: 6 (lower is better) Translates to: LKTPRTYLRSTK*SLLHRREQTTG Trigger: CCCCGTGGTTTGCTCTCTTCTGTGCAACAGACTCAACTTTGTTGACCGTAGGTATGTTCTTGGCGTCTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS GCA 72 bp | GAAACAGGGGCTGCTTTTCTCTTTCTCTGCTCCAACTaGAGCAAGCTATTTGCTGGACTCTTATCCCTAATA | + |
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Preference number: 6 (lower is better) Translates to: ETGAAFLFLCSN*SKLFAGLLSLI Trigger: TATTAGGGATAAGAGTCCAGCAAATAGCTTGCTGCAGTTGGAGCAGAGAAAGAGAAAAGCAGCCCCTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CCA 72 bp | TCCTCCCAACTACCATCCCTAGTATATTCTTGGCCCTaGAAAAGCCCTGCAATTAAAGACGCCAAGAACATA | + |
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Preference number: 6 (lower is better) Translates to: SSQLPSLVYSWP*KSPAIKDAKNI Trigger: TATGTTCTTGGCGTCTTTAATTGCAGGGCTTTTCCAGGGCCAAGAATATACTAGGGATGGTAGTTGGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CCA 72 bp | CCTCCAGGGCACTTAAACATCAGATTCCCTATCAACTaGCTGAACTACCACACTGTAGACTTTCAAAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: PPGHLNIRFPIN*LNYHTVDFQKF Trigger: AAACTTTTGAAAGTCTACAGTGTGGTAGTTCAGCCAGTTGATAGGGAATCTGATGTTTAAGTGCCCTGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CAA 90 bp | CTGTCTCTAGCTCTACATATTTCCCTAGGTAAAATGAAGAATTTGTaGGAATCACGGAGCAGGGAGGTTGTTAGTAATGGAGACTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: LSLALHISLGKMKNL*ESRSREVVSNGDSQ Trigger: TTGGGAGTCTCCATTACTAACAACCTCCCTGCTCCGTGATTCCAACAAATTCTTCATTTTACCTAGGGAAATATGTAGAGCTAGAGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CAA 90 bp | TTCCTGTCTCTAGCTCTACATATTTCCCTAGGTAAAATGAAGAATTaGTTGGAATCACGGAGCAGGGAGGTTGTTAGTAATGGAGACTCC | + |
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Preference number: 6 (lower is better) Translates to: FLSLALHISLGKMKN*LESRSREVVSNGDS Trigger: GGAGTCTCCATTACTAACAACCTCCCTGCTCCGTGATTCCAACAAATTCTTCATTTTACCTAGGGAAATATGTAGAGCTAGAGACAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CAA 72 bp | GCTCTACATATTTCCCTAGGTAAAATGAAGAATTTGTaGGAATCACGGAGCAGGGAGGTTGTTAGTAATGGA | + |
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Preference number: 6 (lower is better) Translates to: ALHISLGKMKNL*ESRSREVVSNG Trigger: TCCATTACTAACAACCTCCCTGCTCCGTGATTCCAACAAATTCTTCATTTTACCTAGGGAAATATGTAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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| CDS CAA 72 bp | CTAGCTCTACATATTTCCCTAGGTAAAATGAAGAATTaGTTGGAATCACGGAGCAGGGAGGTTGTTAGTAAT | + |
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Preference number: 6 (lower is better) Translates to: LALHISLGKMKN*LESRSREVVSN Trigger: ATTACTAACAACCTCCCTGCTCCGTGATTCCAACAAATTCTTCATTTTACCTAGGGAAATATGTAGAGCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476231.1 |
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