RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYDE2 (Homo sapiens)

Ensembl gene IDs: ENSG00000097096

Ensembl transcript IDs: ENST00000234668.6, ENST00000341460.6

Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGGAGGTTGCAGTGACCTaGGATCGCACCAGTGCACTC +
Preference number: 2 (lower is better)
Translates to: TIISWAWWWAPSSQLLGREVAVT*DRTSAL
Trigger: GAGTGCACTGGTGCGATCTCAGGTCACTGCAACCTC...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
3UTR-3UTR TCA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGAGGTGGAGGTTGCAGTaGCCTGAGATCGCACCAGTG +
Preference number: 2 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRRWRLQ*PEIAPV
Trigger: CACTGGTGCGATCTCAGGTCACTGCAACCTCCACCT...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
3UTR-3UTR TCA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGGGCAGGAGAATCACTTaGACCAGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRGRRIT*TREVEV
Trigger: AACCTCCACCTCCCTGGTTCAAGTGATTCTCCTGCC...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
3UTR-3UTR TCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATAAAGCAGAAAAACCTTaGGGGGCTAATAACTTATGT +
Preference number: 2 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENKAEKP*GANNLC
Trigger: ACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTT...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341460.6
3UTR-3UTR GCA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTCAGGGAGGTGGAGGTTaGAGTGACCTGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTQGGGG*SDLRSH
Trigger: GTGCGATCTCAGGTCACTGCAACCTCCACCTCCCTG...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
3UTR-3UTR CCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAATTAGCTGGGCATGGTaGTGGGCCCCGTCATCACAG +
Preference number: 2 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAISWAW*WAPSSQ
Trigger: CTGTGATGACGGGGCCCACCACCATGCCCAGCTAAT...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
3UTR-3UTR CCA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTATAATTAGCTGGGCATaGTGGTGGGCCCCGTCATCA +
Preference number: 2 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTIISWA*WWAPSS
Trigger: TGATGACGGGGCCCACCACCATGCCCAGCTAATTAT...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
3UTR CAA 90 bp CTTATAGCAGCATTTGCATTACAAATAAAATTTGACCAAAGGATGTaGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: LIAAFALQIKFDQRM*QCTRTSTANQTEQL
Trigger: CAGCTGCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGCAAATGCTGCTATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
3UTR-3UTR CAA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCTGGCAGGAGAATCACTaGAACCAGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSWQENH*NQGGGG
Trigger: ACCTCCACCTCCCTGGTTCAAGTGATTCTCCTGCCA...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
3UTR TCA 72 bp ACCAGGACCAGTACTGCAAATCAGACTGAGCAGCTGTaGTGTTCCTCTAAAAGAACATCTAGAGGCCAGGCG +
Preference number: 3 (lower is better)
Translates to: TRTSTANQTEQL*CSSKRTSRGQA
Trigger: CGCCTGGCCTCTAGATGTTCTTTTAGAGGAACATCACAGCTGCTCAGTCTGATTTGCAGTACTGGTCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATTCACTGCCGGCGGCCTaGGGAAGGAGGGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENSLPAA*GRRGLP
Trigger: AGGAAGGCCCCTCCTTCCTCAGGCCGCCGGCAGTGA...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATGGAAGGGAGGCGGCTTaGCACCCACCCGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENGREAA*HPPGGS
Trigger: AGAGCCTCCGGGTGGGTGCCAAGCCGCCTCCCTTCC...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATGGCTCTCGAGGCTTCTaGTGCAGGACGGCCGCATCC +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENGSRGF*CRTAAS
Trigger: GGATGCGGCCGTCCTGCAGCAGAAGCCTCGAGAGCC...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGTCGTCCCAGTCCCGGTaGGCGCCGCACCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRSSQSR*APHLIQ
Trigger: CTGGATCAGGTGCGGCGCGCACCGGGACTGGGACGA...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATCAAAGCGCCCACATTTaGGGAGGCTGCCTGCGTTCC +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENQSAHI*GGCLRS
Trigger: GGAACGCAGGCAGCCTCCCCAAATGTGGGCGCTTTG...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCCCGAGGAGCAGCCGTaGTCCTTGCAGCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRPEEQP*SLQPGG
Trigger: GCCTCCAGGCTGCAAGGACCACGGCTGCTCCTCGGG...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATCACAGAGGACCCCGCTaGATCCCTGAAAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENHRGPR*IPERAS
Trigger: GGAAGCCCTTTCAGGGATCCAGCGGGGTCCTCTGTG...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGCCTGCGTTCCTGTaGCTTTGGGAGCCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRLPAFL*LWEPSH
Trigger: GTGGGACGGCTCCCAAAGTCACAGGAACGCAGGCAG...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATGGGGCAGGTCGTGCATaGCCTGGATCAGCAGATAAT +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENGAGRA*PGSADN
Trigger: ATTATCTGCTGATCCAGGCCATGCACGACCTGCCCC...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGACTTCTGCAGCTTCTTaGCTGTCACTGCCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRTSAAS*LSLPAA
Trigger: GGCCGCCGGCAGTGACAGTCAAGAAGCTGCAGAAGT...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATTTCGGAAGAGCACAGTaGGTCTTCAGTATGCCGCTC +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENFGRAQ*VFSMPL
Trigger: GAGCGGCATACTGAAGACTCACTGTGCTCTTCCGAA...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATCACATTTGGGGAGGCTaGCTGCGTTCCTGTGACTTT +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENHIWGG*LRSCDF
Trigger: AAAGTCACAGGAACGCAGGCAGCCTCCCCAAATGTG...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATATAATTAGCTGGGCATaGTGGTGGGCCCCGTCATCA +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENIISWA*WWAPSS
Trigger: TGATGACGGGGCCCACCACCATGCCCAGCTAATTAT...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATCTCGCAGTTCTTTCTTaGCTGCTGCCGAACCACATA +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENLAVLS*LLPNHI
Trigger: TATGTGGTTCGGCAGCAGTCAAGAAAGAACTGCGAG...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATTACTGCAAATCAGACTaGGCAGCTGTGATGTTCCTC +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENYCKSD*AAVMFL
Trigger: GAGGAACATCACAGCTGCTCAGTCTGATTTGCAGTA...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATTACAGGCCTACTACCTaGCAGCCTCTCTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENYRPTT*QPLFSI
Trigger: AATTGAAAAGAGAGGCTGTCAGGTAGTAGGCCTGTA...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATAGTTGTAAGTTCAGGTaGGTCTCCATCACTAAGGTA +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENSCKFR*VSITKV
Trigger: TACCTTAGTGATGGAGACTCACCTGAACTTACAACT...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATAGAAATGTACACTCATaGGCCCAGATATGTACTGTG +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENRNVHS*AQICTV
Trigger: CACAGTACATATCTGGGCTCATGAGTGTACATTTCT...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTCTGTTGTTATGGGTaGAAGGCTCTTGCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRLCCYG*KALASD
Trigger: GTCAGAGGCAAGAGCCTTCCACCCATAACAACAGAG...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATGGTGAGATGGATAAATaGCTTCTATCTTGGCATTTC +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENGEMDK*LLSWHF
Trigger: GAAATGCCAAGATAGAAGTCATTTATCCATCTCACC...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGGTGCGCGCCGCACCTaGTCCAGCTGTCGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTGARRT*SSCRSA
Trigger: GGCCGAGCGACAGCTGGATCAGGTGCGGCGCGCACC...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATTACACTCTTTGGACATaGGAATTGGCTGTTCAATCA +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENYTLWT*ELAVQS
Trigger: TGATTGAACAGCCAATTCCCATGTCCAAAGAGTGTA...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATCAAAAGGAAGGAAACTaGGACAGCTTTCCTATAAAA +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENQKEGN*DSFPIK
Trigger: TTTTATAGGAAAGCTGTCTCAGTTTCCTTCCTTTTG...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCGGTCTCCTTTGCCACTaGGTATCACAGAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSGLLCH*VSQRTP
Trigger: CGGGGTCCTCTGTGATACGCAGTGGCAAAGGAGACC...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCCTTCTTGACTGTCACTaGCGGCGGCCTGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSLLDCH*RRPEEG
Trigger: TCCTTCCTCAGGCCGCCGGCAGTGACAGTCAAGAAG...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTTCCAGCCGTCCATCCTaGCTCCACGTGGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLSSRPS*LHVAGA
Trigger: AGCCCCCGCCACGTGGAGGCAGGATGGACGGCTGGA...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGTTGACCAAAGGATGTTaGAGTGTACCAGGACCAGTA +
Preference number: 4 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRLTKGC*SVPGPV
Trigger: TACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATACACTGGTATCAAGATaGTATCGGCTTATAACATTC +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENTLVSR*YRLITF
Trigger: GAATGTTATAAGCCGATACCATCTTGATACCAGTGT...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATTTTATATCTGGGTACTaGTTTTCACACAGACCAACA +
Preference number: 4 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENFISGY*FSHRPT
Trigger: TGTTGGTCTGTGTGAAAACCAGTACCCAGATATAAA...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGACAGACCAACAGCTTTaGTATCTCTCTCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRTDQQL*YLSQKP
Trigger: AGGCTTTTGAGAGAGATAGCAAAGCTGTTGGTCTGT...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCACAGGGCTAGGATTTaGAGAAGATGGTTCCATAAT +
Preference number: 4 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRHRARI*RRWFHN
Trigger: ATTATGGAACCATCTTCTCCAAATCCTAGCCCTGTG...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTCATCCTGCCTCCACGTaGCGGGGGCTCGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTHPAST*RGLVPV
Trigger: GACTGGGACGAGCCCCCGCCACGTGGAGGCAGGATG...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAGTGGTCCTTGCAGCCTaGAGGCTGGAGGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAVVLAA*RLEAGG
Trigger: CCCACCGGCCTCCAGCCTCCAGGCTGCAAGGACCAC...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTACCCCGCTGGATCCCTaGAAGGGCTTCCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTTPLDP*KGFPRS
Trigger: GCTCCTCGGGAAGCCCTTTCAGGGATCCAGCGGGGT...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTAGCAGCCGTGGTCCTTaGAGCCTGGAGGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTSSRGP*SLEAGG
Trigger: GCCTCCAGCCTCCAGGCTGCAAGGACCACGGCTGCT...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCGTCAGCGTAATTCTTTaGTCTGGAGGCACCGACAGG +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSVSVIL*SGGTDR
Trigger: CCTGTCGGTGCCTCCAGACCAAAGAATTACGCTGAC...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCTTCAGTATGCCGCTCTaGTTTCATCAGGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSFSMPL*FHQVTA
Trigger: GGCAGTGACCTGATGAAAGCAGAGCGGCATACTGAA...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTTCTCGAGGCTTCTGCTaGAGGACGGCCGCATCCGAG +
Preference number: 4 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTSRGFC*RTAASE
Trigger: CTCGGATGCGGCCGTCCTGCAGCAGAAGCCTCGAGA...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGGAGACACAGGTGAGATaGATAAATGACTTCTATCTT +
Preference number: 4 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRETQVR*INDFYL
Trigger: AAGATAGAAGTCATTTATCCATCTCACCTGTGTCTC...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCGGCCTCAGAGTACTCTaGTATAGCCAATTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSGLRVL*YSQLRF
Trigger: GAAACGCAATTGGCTATATCAGAGTACTCTGAGGCC...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTCCTGGCGGTCTCCTTTaGCACTGCGTATCACAGAGG +
Preference number: 4 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLPGGLL*HCVSQR
Trigger: CCTCTGTGATACGCAGTGGCAAAGGAGACCGCCAGG...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCGGTCTGAATATCACCTaGATGTTCGGAAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSGLNIT*MFGRAQ
Trigger: CTGTGCTCTTCCGAACATGCAGGTGATATTCAGACC...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCATCAGGGGGCAGGTCGTaGATGGCCTGGATCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTASGGRS*MAWISR
Trigger: TCTGCTGATCCAGGCCATGCACGACCTGCCCCCTGA...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAAGGAGGGGCCTTCCTaGCGGTCTCCTTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAKEGPS*RSPLPL
Trigger: CAGTGGCAAAGGAGACCGCCAGGAAGGCCCCTCCTT...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCACAACATGCTCAAATTaGCAGCAGGGAGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSTTCSN*QQGASE
Trigger: TTCTGAAGCTCCCTGCTGTCAATTTGAGCATGTTGT...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAGAGGTTGCAGTGACCTaGGATCGCACCAGTGCACTC +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAEVAVT*DRTSAL
Trigger: GAGTGCACTGGTGCGATCTCAGGTCACTGCAACCTC...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCACCCCTCCCCCATCCTaGTATCTATACATATATGCA +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSTPPPS*YLYIYA
Trigger: TGCATATATGTATAGATATCAGGATGGGGGAGGGGT...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCTCCCAGGGGACATTGTaGCTTTCTGTGAATAAAGGA +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSSQGTL*LSVNKG
Trigger: TCCTTTATTCACAGAAAGTCACAATGTCCCCTGGGA...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTTTTGGGGAGGCTGCCTaGGTTCCTGTGACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLFGEAA*VPVTLG
Trigger: TCCCAAAGTCACAGGAACGCAGGCAGCCTCCCCAAA...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCCTGTCTAATCGGTTTTaGCTTGGCCTAAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSLSNRF*LGLSTP
Trigger: AGGAGTACTTAGGCCAAGGCAAAACCGATTAGACAG...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCACAGGGAGGTGGAGGTTaGAGTGACCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAQGGGG*SDLRSH
Trigger: GTGCGATCTCAGGTCACTGCAACCTCCACCTCCCTG...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTATTAGCTGGGCATGGTaGTGGGCCCCGTCATCACAG +
Preference number: 4 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTISWAW*WAPSSQ
Trigger: CTGTGATGACGGGGCCCACCACCATGCCCAGCTAAT...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCTTCTCTTCCCTTCATTaGAGACCCATAGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSFSSLH*RPIGIF
Trigger: GAAAATGCCTATGGGTCTTCAATGAAGGGAAGAGAA...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCCAGGATCCCAGAACCTaGAAAAGGAGATTTCAACAT +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSQDPRT*KRRFQH
Trigger: ATGTTGAAATCTCCTTTTGCAGGTTCTGGGATCCTG...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTCGTAATTCTTTGGTCTaGAGGCACCGACAGGACACG +
Preference number: 4 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLRNSLV*RHRQDT
Trigger: CGTGTCCTGTCGGTGCCTCCAGACCAAAGAATTACG...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCGTACTTAGAGTCACCTaGGTCATTCTCACAACCATT +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSVLRVT*VILTTI
Trigger: AATGGTTGTGAGAATGACCCAGGTGACTCTAAGTAC...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCACCAGTGCAGAAATCTaGGTACTTAATCCCTTAAGG +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSTSAEI*VLNPLR
Trigger: CCTTAAGGGATTAAGTACCCAGATTTCTGCACTGGT...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCGAGTGGGTTCCCAACTaGATACTACTAGTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSEWVPN*ILLVSN
Trigger: ATTTGAAACTAGTAGTATTCAGTTGGGAACCCACTC...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTGCTGCTCCAGTCTCCTaGATAACGATTGCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLAAPVS*ITIAKW
Trigger: CCACTTAGCAATCGTTATGCAGGAGACTGGAGCAGC...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTAGTTTTCCCCACAGCTaGTCCAGTCTCCTGCATAAC +
Preference number: 4 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLSFPHS*SSLLHN
Trigger: GTTATGCAGGAGACTGGAGCAGCTGTGGGGAAAACT...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTAATACAATAATTAGCTaGGCATGGTGGTGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLNTIIS*AWWWAP
Trigger: CGGGGCCCACCACCATGCCCAGCTAATTATTGTATT...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCCTCAAATTTAACATATaGGGTCGTTCTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSLKFNI*GRSFFC
Trigger: GCAGAAGAAAGAACGACCTCATATGTTAAATTTGAG...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCTGGGAGGATACACTaGTATCAAGATGGTATCGGC +
Preference number: 4 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTAGRIH*YQDGIG
Trigger: GCCGATACCATCTTGATACCAGTGTATCCTCCCAGC...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTATGTTGTTCGGCATGTaGGCAAAGCTGTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLMLFGM*AKLFLL
Trigger: AAGCAAGAACAGCTTTGCTCACATGCCGAACAACAT...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAGTGAGTCTTCAGTATaGCGCTCTGCTTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTASESSV*RSAFIR
Trigger: CCTGATGAAAGCAGAGCGGCATACTGAAGACTCACT...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAGAAGGCTCTTGCCTCTaGCTTAATAATACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAEGSCL*LNNTGP
Trigger: TGGACCAGTATTATTAAGTCAGAGGCAAGAGCCTTC...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCACAGACTGAGCAGCTGTaGTGTTCCTCTAAAAGAACA +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAQTEQL*CSSKRT
Trigger: TGTTCTTTTAGAGGAACATCACAGCTGCTCAGTCTG...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTCTTTCATCAGGTCACTaGCAGACAACATGCTCAAAT +
Preference number: 4 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLLSSGH*QTTCSN
Trigger: ATTTGAGCATGTTGTCTGGCAGTGACCTGATGAAAG...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTAAAGACTGTGATAGCTaGTGTTTAGGTAGAGACACA +
Preference number: 4 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLKDCDS*CLGRDT
Trigger: TGTGTCTCTACCTAAACATCAGCTATCACAGTCTTT...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTAGGATTCATTCCATTTaGCCGTGTGGTCTGAATATC +
Preference number: 4 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTRIHSI*PCGLNI
Trigger: GATATTCAGACCACACGGTCAAATGGAATGAATCCT...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCACCCAGATATGTACTGTaGACACTTAGGTTGATCAGA +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAPRYVL*TLRLIR
Trigger: TCTGATCAACCTAAGTGTTCACAGTACATATCTGGG...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCATTGTACATCCACTTCTaGAGCTTCTTGACTGTCACT +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTALYIHF*SFLTVT
Trigger: AGTGACAGTCAAGAAGCTGCAGAAGTGGATGTACAA...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTAGCTTTTGCTTGTACTaGTGCACAAATTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLSFCLY*CTNSVE
Trigger: TTCCACAGAATTTGTGCAGCAGTACAAGCAAAAGCT...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAAGGAGATTTCAACATaGGACTGTCCTCCACCATTA +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAKEIST*DCPPPL
Trigger: TAATGGTGGAGGACAGTCCCATGTTGAAATCTCCTT...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCACCAATTGCGTTTCTTTaGAACAGTGATGCTGTTAAG +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAPIAFL*NSDAVK
Trigger: CTTAACAGCATCACTGTTTCAAAGAAACGCAATTGG...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAACAAAAGACGTCTTTTaGATCTATCCGAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTATKDVF*IYPRWF
Trigger: AAACCACCTCGGATAGATTCAAAAGACGTCTTTTGT...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTTCTTGCTTTGTTTACTaGATCTACCTGAATTGCACA +
Preference number: 4 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLSCFVY*IYLNCT
Trigger: TGTGCAATTCAGGTAGATTCAGTAAACAAAGCAAGA...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAGCCACCAATTTCAAATaGTCCAACAACATCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAATNFK*SNNIFR
Trigger: CCTAAAGATGTTGTTGGATCATTTGAAATTGGTGGC...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTTTTTGCTTGTACTGCTaGACAAATTCTGTGGAATGG +
Preference number: 4 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTFCLYC*TNSVEW
Trigger: CCATTCCACAGAATTTGTGCAGCAGTACAAGCAAAA...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTAGGATTTGGAGAAGATaGTTCCATAATTCCCAATTC +
Preference number: 4 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLRIWRR*FHNSQF
Trigger: GAATTGGGAATTATGGAACCATCTTCTCCAAATCCT...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTTTTGGACATGGGAATTaGCTGTTCAATCATTACTTC +
Preference number: 4 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLFGHGN*LFNHYF
Trigger: GAAGTAATGATTGAACAGCCAATTCCCATGTCCAAA...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAGAAATGTACACTCTTTaGACATGGGAATTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAEMYTL*TWELAV
Trigger: AACAGCCAATTCCCATGTCCAAAGAGTGTACATTTC...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTTTTACTGAATCTACCTaGATTGCACAAAAGACGTCT +
Preference number: 4 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTFTEST*IAQKTS
Trigger: AGACGTCTTTTGTGCAATTCAGGTAGATTCAGTAAA...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR TCA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTTTTATATCTAGTCCATaGAGAGAATTCTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTFISSP*REFSHC
Trigger: ACAGTGGGAGAATTCTCTTCATGGACTAGATATAAA...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR GCA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTCAGTTTTTCAATGGCTaGCATGTCTTAAAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTQFFNG*HVLKVG
Trigger: ACCAACTTTTAAGACATGGCAGCCATTGAAAAACTG...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAAGCCAGTTTTTCAATaGCTGCCATGTCTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAKPVFQ*LPCLKS
Trigger: ACTTTTAAGACATGGCAGCCATTGAAAAACTGGCTT...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CCA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCATTCAATCATTACTTCTaGCCCATCCATTTTGCTATA +
Preference number: 4 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAFNHYF*PIHFAI
Trigger: TATAGCAAAATGGATGGGCCAGAAGTAATGATTGAA...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS GCA 90 bp TGGGTGCAGCCGCCCGGGCGCGGTCCCCACTCCAGCCGTCCATCCTaGCTCCACGTGGCGGGGGCTCGTCCCAGTCCCGGTGCGCGCCGC +
Preference number: 5 (lower is better)
Translates to: WVQPPGRGPHSSRPS*LHVAGARPSPGARR
Trigger: GCGGCGCGCACCGGGACTGGGACGAGCCCCCGCCACGTGGAGGCAGGATGGACGGCTGGAGTGGGGACCGCGCCCGGGCGGCTGCACCCA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CCA 90 bp CGCCCGGGCGCGGTCCCCACTCCAGCCGTCCATCCTGCCTCCACGTaGCGGGGGCTCGTCCCAGTCCCGGTGCGCGCCGCACCTGATCCA +
Preference number: 5 (lower is better)
Translates to: RPGAVPTPAVHPAST*RGLVPVPVRAAPDP
Trigger: TGGATCAGGTGCGGCGCGCACCGGGACTGGGACGAGCCCCCGCCACGTGGAGGCAGGATGGACGGCTGGAGTGGGGACCGCGCCCGGGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 90 bp CTCCACGTGGCGGGGGCTCGTCCCAGTCCCGGTGCGCGCCGCACCTaGTCCAGCTGTCGCTCGGCCACCGCTGGAAGGGAGGCGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LHVAGARPSPGARRT*SSCRSATAGREAAW
Trigger: CCAAGCCGCCTCCCTTCCAGCGGTGGCCGAGCGACAGCTGGATCAGGTGCGGCGCGCACCGGGACTGGGACGAGCCCCCGCCACGTGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS GCA 90 bp AGGGAGGCGGCTTGGCACCCACCCGGAGGCTCTCGAGGCTTCTGCTaGAGGACGGCCGCATCCGAGGAGTCCGCAGCTGGCCTCCCCGCG +
Preference number: 5 (lower is better)
Translates to: REAAWHPPGGSRGFC*RTAASEESAAGLPA
Trigger: CGCGGGGAGGCCAGCTGCGGACTCCTCGGATGCGGCCGTCCTGCAGCAGAAGCCTCGAGAGCCTCCGGGTGGGTGCCAAGCCGCCTCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS GCA 90 bp CCGTCCATCCTGCCTCCACGTGGCGGGGGCTCGTCCCAGTCCCGGTaGGCGCCGCACCTGATCCAGCTGTCGCTCGGCCACCGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PSILPPRGGGSSQSR*APHLIQLSLGHRWK
Trigger: CTTCCAGCGGTGGCCGAGCGACAGCTGGATCAGGTGCGGCGCGCACCGGGACTGGGACGAGCCCCCGCCACGTGGAGGCAGGATGGACGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CCA 90 bp AAAGGGCTTCCCGAGGAGCAGCCGTGGTCCTTGCAGCCTGGAGGCTaGAGGCCGGTGGGTGCAGCCGCCCGGGCGCGGTCCCCACTCCAG +
Preference number: 5 (lower is better)
Translates to: KGLPEEQPWSLQPGG*RPVGAAARARSPLQ
Trigger: CTGGAGTGGGGACCGCGCCCGGGCGGCTGCACCCACCGGCCTCCAGCCTCCAGGCTGCAAGGACCACGGCTGCTCCTCGGGAAGCCCTTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS GCA 90 bp GGAAGGGAGGCGGCTTGGCACCCACCCGGAGGCTCTCGAGGCTTCTaGTGCAGGACGGCCGCATCCGAGGAGTCCGCAGCTGGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GREAAWHPPGGSRGF*CRTAASEESAAGLP
Trigger: GGGGAGGCCAGCTGCGGACTCCTCGGATGCGGCCGTCCTGCAGCAGAAGCCTCGAGAGCCTCCGGGTGGGTGCCAAGCCGCCTCCCTTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CCA 90 bp TCCCGGTGCGCGCCGCACCTGATCCAGCTGTCGCTCGGCCACCGCTaGAAGGGAGGCGGCTTGGCACCCACCCGGAGGCTCTCGAGGCTT +
Preference number: 5 (lower is better)
Translates to: SRCAPHLIQLSLGHR*KGGGLAPTRRLSRL
Trigger: AAGCCTCGAGAGCCTCCGGGTGGGTGCCAAGCCGCCTCCCTTCCAGCGGTGGCCGAGCGACAGCTGGATCAGGTGCGGCGCGCACCGGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATGAGCAGCCGTGGTCCTaGCAGCCTGGAGGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENEQPWS*QPGGWR
Trigger: CCTCCAGCCTCCAGGCTGCAAGGACCACGGCTGCTC...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 90 bp GGTCTCCTTTGCCACTGCGTATCACAGAGGACCCCGCTGGATCCCTaGAAGGGCTTCCCGAGGAGCAGCCGTGGTCCTTGCAGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: GLLCHCVSQRTPLDP*KGFPRSSRGPCSLE
Trigger: CTCCAGGCTGCAAGGACCACGGCTGCTCCTCGGGAAGCCCTTTCAGGGATCCAGCGGGGTCCTCTGTGATACGCAGTGGCAAAGGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CCA 90 bp TTCTTGACTGTCACTGCCGGCGGCCTGAGGAAGGAGGGGCCTTCCTaGCGGTCTCCTTTGCCACTGCGTATCACAGAGGACCCCGCTGGA +
Preference number: 5 (lower is better)
Translates to: FLTVTAGGLRKEGPS*RSPLPLRITEDPAG
Trigger: TCCAGCGGGGTCCTCTGTGATACGCAGTGGCAAAGGAGACCGCCAGGAAGGCCCCTCCTTCCTCAGGCCGCCGGCAGTGACAGTCAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 90 bp GCACTTTCAAAGCGCCCACATTTGGGGAGGCTGCCTGCGTTCCTGTaGCTTTGGGAGCCGTCCCACGGGCACGACCCTTCATTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: ALSKRPHLGRLPAFL*LWEPSHGHDPSFPG
Trigger: CCCTGGGAATGAAGGGTCGTGCCCGTGGGACGGCTCCCAAAGTCACAGGAACGCAGGCAGCCTCCCCAAATGTGGGCGCTTTGAAAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS CCA 90 bp TTCCTGGCGGTCTCCTTTGCCACTGCGTATCACAGAGGACCCCGCTaGATCCCTGAAAGGGCTTCCCGAGGAGCAGCCGTGGTCCTTGCA +
Preference number: 5 (lower is better)
Translates to: FLAVSFATAYHRGPR*IPERASRGAAVVLA
Trigger: TGCAAGGACCACGGCTGCTCCTCGGGAAGCCCTTTCAGGGATCCAGCGGGGTCCTCTGTGATACGCAGTGGCAAAGGAGACCGCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS GCA 90 bp CGGTTTTCACGCACTTTCAAAGCGCCCACATTTGGGGAGGCTGCCTaGGTTCCTGTGACTTTGGGAGCCGTCCCACGGGCACGACCCTTC +
Preference number: 5 (lower is better)
Translates to: RFSRTFKAPTFGEAA*VPVTLGAVPRARPF
Trigger: GAAGGGTCGTGCCCGTGGGACGGCTCCCAAAGTCACAGGAACGCAGGCAGCCTCCCCAAATGTGGGCGCTTTGAAAGTGCGTGAAAACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS GCA 90 bp GACACGGTTTTCACGCACTTTCAAAGCGCCCACATTTGGGGAGGCTaGCTGCGTTCCTGTGACTTTGGGAGCCGTCCCACGGGCACGACC +
Preference number: 5 (lower is better)
Translates to: DTVFTHFQSAHIWGG*LRSCDFGSRPTGTT
Trigger: GGTCGTGCCCGTGGGACGGCTCCCAAAGTCACAGGAACGCAGGCAGCCTCCCCAAATGTGGGCGCTTTGAAAGTGCGTGAAAACCGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS GCA 90 bp CAGACGCCCTTTGTACATCCACTTCTGCAGCTTCTTGACTGTCACTaGCGGCGGCCTGAGGAAGGAGGGGCCTTCCTGGCGGTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: QTPFVHPLLQLLDCH*RRPEEGGAFLAVSF
Trigger: AAAGGAGACCGCCAGGAAGGCCCCTCCTTCCTCAGGCCGCCGGCAGTGACAGTCAAGAAGCTGCAGAAGTGGATGTACAAAGGGCGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS GCA 90 bp CCCTTCATTCCCAGGGACAGCAGACGCCCTTTGTACATCCACTTCTaGAGCTTCTTGACTGTCACTGCCGGCGGCCTGAGGAAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: PFIPRDSRRPLYIHF*SFLTVTAGGLRKEG
Trigger: CCCCTCCTTCCTCAGGCCGCCGGCAGTGACAGTCAAGAAGCTGCAGAAGTGGATGTACAAAGGGCGTCTGCTGTCCCTGGGAATGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS-3UTR CAA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGTCAAAGCGCCCACATTaGGGGAGGCTGCCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRSKRPH*GRLPAF
Trigger: GAACGCAGGCAGCCTCCCCAAATGTGGGCGCTTTGA...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGGACAGCAGACGCCCTTaGTACATCCACTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRDSRRP*YIHFCS
Trigger: GCTGCAGAAGTGGATGTACAAAGGGCGTCTGCTGTC...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATGACAACATGCTCAAATaGACAGCAGGGAGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENDNMLK*TAGSFR
Trigger: TCTGAAGCTCCCTGCTGTCAATTTGAGCATGTTGTC...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATCACAGACCAACAGCTTaGCTATCTCTCTCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENHRPTA*LSLSKA
Trigger: GGCTTTTGAGAGAGATAGCAAAGCTGTTGGTCTGTG...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATTTTGACCAAAGGATGTaGCAGTGTACCAGGACCAGT +
Preference number: 5 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENFDQRM*QCTRTS
Trigger: ACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAA...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATACAACATCTTTAGGGTaGCCTTCTCAATCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENTTSLG*PSQSLA
Trigger: TGCCAGAGATTGAGAAGGCAACCCTAAAGATGTTGT...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATCACAAAAGACGTCTTTaGAATCTATCCGAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENHKRRL*NLSEVV
Trigger: AACCACCTCGGATAGATTCAAAAGACGTCTTTTGTG...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 90 bp GCCGCTCTGCTTTCATCAGGTCACTGCCAGACAACATGCTCAAATTaGCAGCAGGGAGCTTCAGAACAGCAGAGTCGGCCTCACCAAAAC +
Preference number: 5 (lower is better)
Translates to: AALLSSGHCQTTCSN*QQGASEQQSRPHQN
Trigger: GTTTTGGTGAGGCCGACTCTGCTGTTCTGAAGCTCCCTGCTGTCAATTTGAGCATGTTGTCTGGCAGTGACCTGATGAAAGCAGAGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS-3UTR CAA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATCTGAATCTACCTGAATaGCACAAAAGACGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENLNLPE*HKRRLL
Trigger: CAAAAGACGTCTTTTGTGCAATTCAGGTAGATTCAG...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATCTTTGGACATGGGAATaGGCTGTTCAATCATTACTT +
Preference number: 5 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENLWTWE*AVQSLL
Trigger: AAGTAATGATTGAACAGCCAATTCCCATGTCCAAAG...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCATGGAAGGGAGGCGGCTaGGCACCCACCCGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTAWKGGG*APTRRL
Trigger: GAGCCTCCGGGTGGGTGCCAAGCCGCCTCCCTTCCA...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp GCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGCTGTGGCAGGAGAATATATTAAGCTTGTTTTaGTTGAGCTCACGTTCCAGA +
Preference number: 5 (lower is better)
Translates to: AWWWAPSSQLLGRLWQENILSLF*LSSRSR
Trigger: TCTGGAACGTGAGCTCAACAAAAACAAGCTTAATAT...ATTCTCCTGCCACAGCCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGTCCTCAGGAATGGGATaGTACCATATTTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRSSGMG*YHISPS
Trigger: TGAAGGAGAAATATGGTACAATCCCATTCCTGAGGA...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTTGCGTTCCTGTGACTTaGGGAGCCGTCCCACGGGCA +
Preference number: 5 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLCVPVT*GAVPRA
Trigger: TGCCCGTGGGACGGCTCCCAAAGTCACAGGAACGCA...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp ACAATAATTAGCTGGGCATGGTGGTGGGCCCCGTCATCACAGCTACTCGGGAGGAAGGACTTTTTGCCATaGCATCTAATACAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: TIISWAWWWAPSSQLLGRKDFLP*HLIQPH
Trigger: ATGAGGCTGTATTAGATGCAATGGCAAAAAGTCCTT...CCTCCCGAGTAGCTGTGATGACGGGGCCCACCACCATGCCCAGCTAATTATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 90 bp CAACAGCTTTGCTATCTCTCTCAAAAGCCTCTCGCAGTTCTTTCTTaGCTGCTGCCGAACCACATAATCGATACAGGCCTACTACCTGAC +
Preference number: 5 (lower is better)
Translates to: QQLCYLSQKPLAVLS*LLPNHIIDTGLLPD
Trigger: GTCAGGTAGTAGGCCTGTATCGATTATGTGGTTCGGCAGCAGTCAAGAAAGAACTGCGAGAGGCTTTTGAGAGAGATAGCAAAGCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 90 bp GAGCTTCAGAACAGCAGAGTCGGCCTCACCAAAACTCAAGGCACTTaGTATACCAAGGTCATCATCCTCAGGAATGGGATTGTACCATAT +
Preference number: 5 (lower is better)
Translates to: ELQNSRVGLTKTQGT*YTKVIILRNGIVPY
Trigger: ATATGGTACAATCCCATTCCTGAGGATGATGACCTTGGTATATCAAGTGCCTTGAGTTTTGGTGAGGCCGACTCTGCTGTTCTGAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS-3UTR CAA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTTCCTGGCGGTCTCCTTaGCCACTGCGTATCACAGAG +
Preference number: 5 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTSWRSP*PLRITE
Trigger: CTCTGTGATACGCAGTGGCAAAGGAGACCGCCAGGA...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 90 bp GAATGGGCAGGATGTATAGGATTCATTCCATTTGACCGTGTGGTCTaGATATCACCTGCATGTTCGGAAGAGCACAGTGAGTCTTCAGTA +
Preference number: 5 (lower is better)
Translates to: EWAGCIGFIPFDRVV*ISPACSEEHSESSV
Trigger: TACTGAAGACTCACTGTGCTCTTCCGAACATGCAGGTGATATTCAGACCACACGGTCAAATGGAATGAATCCTATACATCCTGCCCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS TCA 90 bp CACAAATTCTGTGGAATGGGCAGGATGTATAGGATTCATTCCATTTaGCCGTGTGGTCTGAATATCACCTGCATGTTCGGAAGAGCACAG +
Preference number: 5 (lower is better)
Translates to: HKFCGMGRMYRIHSI*PCGLNITCMFGRAQ
Trigger: CTGTGCTCTTCCGAACATGCAGGTGATATTCAGACCACACGGTCAAATGGAATGAATCCTATACATCCTGCCCATTCCACAGAATTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS-3UTR CAA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTTGGCAGGAGAATCACTaGAACCAGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTWQENH*NQGGGG
Trigger: ACCTCCACCTCCCTGGTTCAAGTGATTCTCCTGCCA...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 90 bp GAATCAGTAAAGACTCTGTTGTTATGGGTGGAAGGCTCTTGCCTCTaGCTTAATAATACTGGTCCAAAGCACACAGCCAAATTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: ESVKTLLLWVEGSCL*LNNTGPKHTAKFWH
Trigger: GTGCCAGAATTTGGCTGTGTGCTTTGGACCAGTATTATTAAGTCAGAGGCAAGAGCCTTCCACCCATAACAACAGAGTCTTTACTGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS GCA 90 bp CTGTCCTCCACCATTATACCTTCTTGTGTCTTGTGTCCTAGCTTTTaGTTGTACTGCTGCACAAATTCTGTGGAATGGGCAGGATGTATA +
Preference number: 5 (lower is better)
Translates to: LSSTIIPSCVLCPSF*LYCCTNSVEWAGCI
Trigger: TATACATCCTGCCCATTCCACAGAATTTGTGCAGCAGTACAAGCAAAAGCTAGGACACAAGACACAAGAAGGTATAATGGTGGAGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS-3UTR CAA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTTGTCAGCGTAATTCTTaGGTCTGGAGGCACCGACAG +
Preference number: 5 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTCQRNS*VWRHRQ
Trigger: CTGTCGGTGCCTCCAGACCAAAGAATTACGCTGACA...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp TTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAAATCAGACTGAGCCAAAACTCAAGGCACTaGATATACCAAGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: LTKGCCSVPGPVLQIRLSQNSRH*IYQGHH
Trigger: ATGATGACCTTGGTATATCAAGTGCCTTGAGTTTTG...GCTCAGTCTGATTTGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCATCTCGCAGTTCTTTCTaGACTGCTGCCGAACCACAT +
Preference number: 5 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTASRSSF*TAAEPH
Trigger: ATGTGGTTCGGCAGCAGTCAAGAAAGAACTGCGAGA...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS GCA 90 bp ATTATACCTTCTTGTGTCTTGTGTCCTAGCTTTTGCTTGTACTGCTaGACAAATTCTGTGGAATGGGCAGGATGTATAGGATTCATTCCA +
Preference number: 5 (lower is better)
Translates to: IIPSCVLCPSFCLYC*TNSVEWAGCIGFIP
Trigger: TGGAATGAATCCTATACATCCTGCCCATTCCACAGAATTTGTGCAGCAGTACAAGCAAAAGCTAGGACACAAGACACAAGAAGGTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS GCA 90 bp ACCATTATACCTTCTTGTGTCTTGTGTCCTAGCTTTTGCTTGTACTaGTGCACAAATTCTGTGGAATGGGCAGGATGTATAGGATTCATT +
Preference number: 5 (lower is better)
Translates to: TIIPSCVLCPSFCLY*CTNSVEWAGCIGFI
Trigger: AATGAATCCTATACATCCTGCCCATTCCACAGAATTTGTGCAGCAGTACAAGCAAAAGCTAGGACACAAGACACAAGAAGGTATAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS-3UTR CAA 90 bp GTGGTTCCCATAAAGCAGAAAAACCTTGAGGGGCTAATAACTTATGTGAACCTTGTTCTCTTCCCTTCATaGAAGACCCATAGGCATTTT +
Preference number: 5 (lower is better)
Translates to: VVPIKQKNLEGLITYVNLVLFPS*KTHRHF
Trigger: AAAATGCCTATGGGTCTTCAATGAAGGGAAGAGAAC...AAGGTTCACATAAGTTATTAGCCCCTCAAGGTTTTTCTGCTTTATGGGAACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCATCAGTAAAGACTCTGTaGTTATGGGTGGAAGGCTCT +
Preference number: 5 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTASVKTL*LWVEGS
Trigger: AGAGCCTTCCACCCATAACAACAGAGTCTTTACTGA...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 90 bp CTCAGCACCATAGAAATGTACACTCATGAGCCCAGATATGTACTGTaGACACTTAGGTTGATCAGAAAAGCTATAATGCCTAAAAGCATC +
Preference number: 5 (lower is better)
Translates to: LSTIEMYTHEPRYVL*TLRLIRKAIMPKSI
Trigger: GATGCTTTTAGGCATTATAGCTTTTCTGATCAACCTAAGTGTTCACAGTACATATCTGGGCTCATGAGTGTACATTTCTATGGTGCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS-3UTR CAA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTTGTCCTAGCTTTTGCTaGTACTGCTGCACAAATTCT +
Preference number: 5 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTCPSFC*YCCTNS
Trigger: AGAATTTGTGCAGCAGTACAAGCAAAAGCTAGGACA...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp GCATTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTATACCTTCTTGTGTCTaGTGTCCTAGCTTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: ALQIKFDQRMLQCTRTSTIPSCV*CPSFCL
Trigger: CAAGCAAAAGCTAGGACACAAGACACAAGAAGGTAT...AGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 90 bp TTTGTTTTCAGATCCATGTTTGCTAGCTTTAGTTGTAAGTTCAGGTaGGTCTCCATCACTAAGGTAACCACCTTTGCAGGAATACTTAGA +
Preference number: 5 (lower is better)
Translates to: FVFRSMFASFSCKFR*VSITKVTTFAGILR
Trigger: TCTAAGTATTCCTGCAAAGGTGGTTACCTTAGTGATGGAGACTCACCTGAACTTACAACTAAAGCTAGCAAACATGGATCTGAAAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS TCA 90 bp TTTCGATCCACTGTAGACTCAACTGTCTGCATTGTCAAATATGTCTaGAATGTACACTCTTTGGACATGGGAATTGGCTGTTCAATCATT +
Preference number: 5 (lower is better)
Translates to: FRSTVDSTVCIVKYV*NVHSLDMGIGCSII
Trigger: AATGATTGAACAGCCAATTCCCATGTCCAAAGAGTGTACATTTCAGACATATTTGACAATGCAGACAGTTGAGTCTACAGTGGATCGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCATTGTCTGTTGATTTTTaGACAGTTAAACGCTGCACT +
Preference number: 5 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTALSVDF*TVKRCT
Trigger: AGTGCAGCGTTTAACTGTCAAAAAATCAACAGACAA...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCAACTCAACTGTCTGCATaGTCAAATATGTCTGAAATG +
Preference number: 5 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTATQLSA*SNMSEM
Trigger: CATTTCAGACATATTTGACAATGCAGACAGTTGAGT...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS-3UTR CAA 90 bp TTACAAATAAAATTTGACCAAAGGATGTTGCAGTGTACCAGGACCAGTACTGCATTAAGCTTGTTTTTGTaGAGCTCACGTTCCAGATTT +
Preference number: 5 (lower is better)
Translates to: LQIKFDQRMLQCTRTSTALSLFL*SSRSRF
Trigger: AAATCTGGAACGTGAGCTCAACAAAAACAAGCTTAA...TGCAGTACTGGTCCTGGTACACTGCAACATCCTTTGGTCAAATTTTATTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS GCA 72 bp CCGCCCGGGCGCGGTCCCCACTCCAGCCGTCCATCCTaGCTCCACGTGGCGGGGGCTCGTCCCAGTCCCGGT +
Preference number: 6 (lower is better)
Translates to: PPGRGPHSSRPS*LHVAGARPSPG
Trigger: ACCGGGACTGGGACGAGCCCCCGCCACGTGGAGGCAGGATGGACGGCTGGAGTGGGGACCGCGCCCGGGCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CCA 72 bp CCCGAGGAGCAGCCGTGGTCCTTGCAGCCTGGAGGCTaGAGGCCGGTGGGTGCAGCCGCCCGGGCGCGGTCC +
Preference number: 6 (lower is better)
Translates to: PEEQPWSLQPGG*RPVGAAARARS
Trigger: GGACCGCGCCCGGGCGGCTGCACCCACCGGCCTCCAGCCTCCAGGCTGCAAGGACCACGGCTGCTCCTCGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CCA 72 bp AGCCGTGGTCCTTGCAGCCTGGAGGCTGGAGGCCGGTaGGTGCAGCCGCCCGGGCGCGGTCCCCACTCCAGC +
Preference number: 6 (lower is better)
Translates to: SRGPCSLEAGGR*VQPPGRGPHSS
Trigger: GCTGGAGTGGGGACCGCGCCCGGGCGGCTGCACCCACCGGCCTCCAGCCTCCAGGCTGCAAGGACCACGGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 72 bp GCGGGGGCTCGTCCCAGTCCCGGTGCGCGCCGCACCTaGTCCAGCTGTCGCTCGGCCACCGCTGGAAGGGAG +
Preference number: 6 (lower is better)
Translates to: AGARPSPGARRT*SSCRSATAGRE
Trigger: CTCCCTTCCAGCGGTGGCCGAGCGACAGCTGGATCAGGTGCGGCGCGCACCGGGACTGGGACGAGCCCCCGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS GCA 72 bp CTGCCTCCACGTGGCGGGGGCTCGTCCCAGTCCCGGTaGGCGCCGCACCTGATCCAGCTGTCGCTCGGCCAC +
Preference number: 6 (lower is better)
Translates to: LPPRGGGSSQSR*APHLIQLSLGH
Trigger: GTGGCCGAGCGACAGCTGGATCAGGTGCGGCGCGCACCGGGACTGGGACGAGCCCCCGCCACGTGGAGGCAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CCA 72 bp GCGCCGCACCTGATCCAGCTGTCGCTCGGCCACCGCTaGAAGGGAGGCGGCTTGGCACCCACCCGGAGGCTC +
Preference number: 6 (lower is better)
Translates to: APHLIQLSLGHR*KGGGLAPTRRL
Trigger: GAGCCTCCGGGTGGGTGCCAAGCCGCCTCCCTTCCAGCGGTGGCCGAGCGACAGCTGGATCAGGTGCGGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS GCA 72 bp GCTTGGCACCCACCCGGAGGCTCTCGAGGCTTCTGCTaGAGGACGGCCGCATCCGAGGAGTCCGCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: AWHPPGGSRGFC*RTAASEESAAG
Trigger: GCCAGCTGCGGACTCCTCGGATGCGGCCGTCCTGCAGCAGAAGCCTCGAGAGCCTCCGGGTGGGTGCCAAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS GCA 72 bp GCGGCTTGGCACCCACCCGGAGGCTCTCGAGGCTTCTaGTGCAGGACGGCCGCATCCGAGGAGTCCGCAGCT +
Preference number: 6 (lower is better)
Translates to: AAWHPPGGSRGF*CRTAASEESAA
Trigger: AGCTGCGGACTCCTCGGATGCGGCCGTCCTGCAGCAGAAGCCTCGAGAGCCTCCGGGTGGGTGCCAAGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CCA 72 bp AGCTGTCGCTCGGCCACCGCTGGAAGGGAGGCGGCTTaGCACCCACCCGGAGGCTCTCGAGGCTTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SCRSATAGREAA*HPPGGSRGFCC
Trigger: GCAGCAGAAGCCTCGAGAGCCTCCGGGTGGGTGCCAAGCCGCCTCCCTTCCAGCGGTGGCCGAGCGACAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CAA 72 bp CAGCTGTCGCTCGGCCACCGCTGGAAGGGAGGCGGCTaGGCACCCACCCGGAGGCTCTCGAGGCTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: QLSLGHRWKGGG*APTRRLSRLLL
Trigger: CAGCAGAAGCCTCGAGAGCCTCCGGGTGGGTGCCAAGCCGCCTCCCTTCCAGCGGTGGCCGAGCGACAGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CAA 90 bp CACCTGATCCAGCTGTCGCTCGGCCACCGCTGGAAGGGAGGCGGCTaGGCACCCACCCGGAGGCTCTCGAGGCTTCTGCTGCAGGACGGC +
Preference number: 6 (lower is better)
Translates to: HLIQLSLGHRWKGGG*APTRRLSRLLLQDG
Trigger: GCCGTCCTGCAGCAGAAGCCTCGAGAGCCTCCGGGTGGGTGCCAAGCCGCCTCCCTTCCAGCGGTGGCCGAGCGACAGCTGGATCAGGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CCA 72 bp GCTGGATCCCTGAAAGGGCTTCCCGAGGAGCAGCCGTaGTCCTTGCAGCCTGGAGGCTGGAGGCCGGTGGGT +
Preference number: 6 (lower is better)
Translates to: AGSLKGLPEEQP*SLQPGGWRPVG
Trigger: ACCCACCGGCCTCCAGCCTCCAGGCTGCAAGGACCACGGCTGCTCCTCGGGAAGCCCTTTCAGGGATCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CAA 90 bp ACTGCCGGCGGCCTGAGGAAGGAGGGGCCTTCCTGGCGGTCTCCTTaGCCACTGCGTATCACAGAGGACCCCGCTGGATCCCTGAAAGGG +
Preference number: 6 (lower is better)
Translates to: TAGGLRKEGPSWRSP*PLRITEDPAGSLKG
Trigger: CCCTTTCAGGGATCCAGCGGGGTCCTCTGTGATACGCAGTGGCAAAGGAGACCGCCAGGAAGGCCCCTCCTTCCTCAGGCCGCCGGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 72 bp AAGCGCCCACATTTGGGGAGGCTGCCTGCGTTCCTGTaGCTTTGGGAGCCGTCCCACGGGCACGACCCTTCA +
Preference number: 6 (lower is better)
Translates to: KRPHLGRLPAFL*LWEPSHGHDPS
Trigger: TGAAGGGTCGTGCCCGTGGGACGGCTCCCAAAGTCACAGGAACGCAGGCAGCCTCCCCAAATGTGGGCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS TCA 72 bp TGCCACTGCGTATCACAGAGGACCCCGCTGGATCCCTaGAAGGGCTTCCCGAGGAGCAGCCGTGGTCCTTGC +
Preference number: 6 (lower is better)
Translates to: CHCVSQRTPLDP*KGFPRSSRGPC
Trigger: GCAAGGACCACGGCTGCTCCTCGGGAAGCCCTTTCAGGGATCCAGCGGGGTCCTCTGTGATACGCAGTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CAA 72 bp CCCACATTTGGGGAGGCTGCCTGCGTTCCTGTGACTTaGGGAGCCGTCCCACGGGCACGACCCTTCATTCCC +
Preference number: 6 (lower is better)
Translates to: PTFGEAACVPVT*GAVPRARPFIP
Trigger: GGGAATGAAGGGTCGTGCCCGTGGGACGGCTCCCAAAGTCACAGGAACGCAGGCAGCCTCCCCAAATGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS CAA 90 bp CCCAGGGACAGCAGACGCCCTTTGTACATCCACTTCTGCAGCTTCTaGACTGTCACTGCCGGCGGCCTGAGGAAGGAGGGGCCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: PRDSRRPLYIHFCSF*TVTAGGLRKEGPSW
Trigger: CCAGGAAGGCCCCTCCTTCCTCAGGCCGCCGGCAGTGACAGTCAAGAAGCTGCAGAAGTGGATGTACAAAGGGCGTCTGCTGTCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS CAA 90 bp TTCAAAGCGCCCACATTTGGGGAGGCTGCCTGCGTTCCTGTGACTTaGGGAGCCGTCCCACGGGCACGACCCTTCATTCCCAGGGACAGC +
Preference number: 6 (lower is better)
Translates to: FKAPTFGEAACVPVT*GAVPRARPFIPRDS
Trigger: GCTGTCCCTGGGAATGAAGGGTCGTGCCCGTGGGACGGCTCCCAAAGTCACAGGAACGCAGGCAGCCTCCCCAAATGTGGGCGCTTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS GCA 72 bp CGCACTTTCAAAGCGCCCACATTTGGGGAGGCTGCCTaGGTTCCTGTGACTTTGGGAGCCGTCCCACGGGCA +
Preference number: 6 (lower is better)
Translates to: RTFKAPTFGEAA*VPVTLGAVPRA
Trigger: TGCCCGTGGGACGGCTCCCAAAGTCACAGGAACGCAGGCAGCCTCCCCAAATGTGGGCGCTTTGAAAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS CCA 72 bp GTCTCCTTTGCCACTGCGTATCACAGAGGACCCCGCTaGATCCCTGAAAGGGCTTCCCGAGGAGCAGCCGTG +
Preference number: 6 (lower is better)
Translates to: VSFATAYHRGPR*IPERASRGAAV
Trigger: CACGGCTGCTCCTCGGGAAGCCCTTTCAGGGATCCAGCGGGGTCCTCTGTGATACGCAGTGGCAAAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CAA 90 bp GTCCCACGGGCACGACCCTTCATTCCCAGGGACAGCAGACGCCCTTaGTACATCCACTTCTGCAGCTTCTTGACTGTCACTGCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: VPRARPFIPRDSRRP*YIHFCSFLTVTAGG
Trigger: GCCGCCGGCAGTGACAGTCAAGAAGCTGCAGAAGTGGATGTACAAAGGGCGTCTGCTGTCCCTGGGAATGAAGGGTCGTGCCCGTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS GCA 72 bp CCCAGGGACAGCAGACGCCCTTTGTACATCCACTTCTaGAGCTTCTTGACTGTCACTGCCGGCGGCCTGAGG +
Preference number: 6 (lower is better)
Translates to: PRDSRRPLYIHF*SFLTVTAGGLR
Trigger: CCTCAGGCCGCCGGCAGTGACAGTCAAGAAGCTGCAGAAGTGGATGTACAAAGGGCGTCTGCTGTCCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS GCA 72 bp TTTGTACATCCACTTCTGCAGCTTCTTGACTGTCACTaGCGGCGGCCTGAGGAAGGAGGGGCCTTCCTGGCG +
Preference number: 6 (lower is better)
Translates to: FVHPLLQLLDCH*RRPEEGGAFLA
Trigger: CGCCAGGAAGGCCCCTCCTTCCTCAGGCCGCCGGCAGTGACAGTCAAGAAGCTGCAGAAGTGGATGTACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS CCA 72 bp GACACGGTTTTCACGCACTTTCAAAGCGCCCACATTTaGGGAGGCTGCCTGCGTTCCTGTGACTTTGGGAGC +
Preference number: 6 (lower is better)
Translates to: DTVFTHFQSAHI*GGCLRSCDFGS
Trigger: GCTCCCAAAGTCACAGGAACGCAGGCAGCCTCCCCAAATGTGGGCGCTTTGAAAGTGCGTGAAAACCGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS GCA 72 bp CCTGCATGTTCGGAAGAGCACAGTGAGTCTTCAGTATaGCGCTCTGCTTTCATCAGGTCACTGCCAGACAAC +
Preference number: 6 (lower is better)
Translates to: PACSEEHSESSV*RSAFIRSLPDN
Trigger: GTTGTCTGGCAGTGACCTGATGAAAGCAGAGCGGCATACTGAAGACTCACTGTGCTCTTCCGAACATGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS CAA 72 bp GCTTTCATCAGGTCACTGCCAGACAACATGCTCAAATaGACAGCAGGGAGCTTCAGAACAGCAGAGTCGGCC +
Preference number: 6 (lower is better)
Translates to: AFIRSLPDNMLK*TAGSFRTAESA
Trigger: GGCCGACTCTGCTGTTCTGAAGCTCCCTGCTGTCAATTTGAGCATGTTGTCTGGCAGTGACCTGATGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS CAA 90 bp TGCCGCTCTGCTTTCATCAGGTCACTGCCAGACAACATGCTCAAATaGACAGCAGGGAGCTTCAGAACAGCAGAGTCGGCCTCACCAAAA +
Preference number: 6 (lower is better)
Translates to: CRSAFIRSLPDNMLK*TAGSFRTAESASPK
Trigger: TTTTGGTGAGGCCGACTCTGCTGTTCTGAAGCTCCCTGCTGTCAATTTGAGCATGTTGTCTGGCAGTGACCTGATGAAAGCAGAGCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS TCA 72 bp CTTTCATCAGGTCACTGCCAGACAACATGCTCAAATTaGCAGCAGGGAGCTTCAGAACAGCAGAGTCGGCCT +
Preference number: 6 (lower is better)
Translates to: LSSGHCQTTCSN*QQGASEQQSRP
Trigger: AGGCCGACTCTGCTGTTCTGAAGCTCCCTGCTGTCAATTTGAGCATGTTGTCTGGCAGTGACCTGATGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS CAA 90 bp GGAGCTTCAGAACAGCAGAGTCGGCCTCACCAAAACTCAAGGCACTaGATATACCAAGGTCATCATCCTCAGGAATGGGATTGTACCATA +
Preference number: 6 (lower is better)
Translates to: GASEQQSRPHQNSRH*IYQGHHPQEWDCTI
Trigger: TATGGTACAATCCCATTCCTGAGGATGATGACCTTGGTATATCAAGTGCCTTGAGTTTTGGTGAGGCCGACTCTGCTGTTCTGAAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS TCA 72 bp AACAGCAGAGTCGGCCTCACCAAAACTCAAGGCACTTaGTATACCAAGGTCATCATCCTCAGGAATGGGATT +
Preference number: 6 (lower is better)
Translates to: NSRVGLTKTQGT*YTKVIILRNGI
Trigger: AATCCCATTCCTGAGGATGATGACCTTGGTATATCAAGTGCCTTGAGTTTTGGTGAGGCCGACTCTGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS TCA 72 bp TGCTATCTCTCTCAAAAGCCTCTCGCAGTTCTTTCTTaGCTGCTGCCGAACCACATAATCGATACAGGCCTA +
Preference number: 6 (lower is better)
Translates to: CYLSQKPLAVLS*LLPNHIIDTGL
Trigger: TAGGCCTGTATCGATTATGTGGTTCGGCAGCAGTCAAGAAAGAACTGCGAGAGGCTTTTGAGAGAGATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CAA 72 bp TTGCTATCTCTCTCAAAAGCCTCTCGCAGTTCTTTCTaGACTGCTGCCGAACCACATAATCGATACAGGCCT +
Preference number: 6 (lower is better)
Translates to: LLSLSKASRSSF*TAAEPHNRYRP
Trigger: AGGCCTGTATCGATTATGTGGTTCGGCAGCAGTCAAGAAAGAACTGCGAGAGGCTTTTGAGAGAGATAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 72 bp TGTGGAATGGGCAGGATGTATAGGATTCATTCCATTTaGCCGTGTGGTCTGAATATCACCTGCATGTTCGGA +
Preference number: 6 (lower is better)
Translates to: CGMGRMYRIHSI*PCGLNITCMFG
Trigger: TCCGAACATGCAGGTGATATTCAGACCACACGGTCAAATGGAATGAATCCTATACATCCTGCCCATTCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS CAA 90 bp TCCTCCACCATTATACCTTCTTGTGTCTTGTGTCCTAGCTTTTGCTaGTACTGCTGCACAAATTCTGTGGAATGGGCAGGATGTATAGGA +
Preference number: 6 (lower is better)
Translates to: SSTIIPSCVLCPSFC*YCCTNSVEWAGCIG
Trigger: TCCTATACATCCTGCCCATTCCACAGAATTTGTGCAGCAGTACAAGCAAAAGCTAGGACACAAGACACAAGAAGGTATAATGGTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS TCA 72 bp AAGACTCTGTTGTTATGGGTGGAAGGCTCTTGCCTCTaGCTTAATAATACTGGTCCAAAGCACACAGCCAAA +
Preference number: 6 (lower is better)
Translates to: KTLLLWVEGSCL*LNNTGPKHTAK
Trigger: TTTGGCTGTGTGCTTTGGACCAGTATTATTAAGTCAGAGGCAAGAGCCTTCCACCCATAACAACAGAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS GCA 72 bp TCTTGTGTCTTGTGTCCTAGCTTTTGCTTGTACTGCTaGACAAATTCTGTGGAATGGGCAGGATGTATAGGA +
Preference number: 6 (lower is better)
Translates to: SCVLCPSFCLYC*TNSVEWAGCIG
Trigger: TCCTATACATCCTGCCCATTCCACAGAATTTGTGCAGCAGTACAAGCAAAAGCTAGGACACAAGACACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS GCA 72 bp CCTTCTTGTGTCTTGTGTCCTAGCTTTTGCTTGTACTaGTGCACAAATTCTGTGGAATGGGCAGGATGTATA +
Preference number: 6 (lower is better)
Translates to: PSCVLCPSFCLY*CTNSVEWAGCI
Trigger: TATACATCCTGCCCATTCCACAGAATTTGTGCAGCAGTACAAGCAAAAGCTAGGACACAAGACACAAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS GCA 72 bp TATCTGGGTACTGGTTTTCACACAGACCAACAGCTTTaGTATCTCTCTCAAAAGCCTCTCGCAGTTCTTTCT +
Preference number: 6 (lower is better)
Translates to: YLGTGFHTDQQL*YLSQKPLAVLS
Trigger: AGAAAGAACTGCGAGAGGCTTTTGAGAGAGATAGCAAAGCTGTTGGTCTGTGTGAAAACCAGTACCCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CAA 72 bp ATATCTGGGTACTGGTTTTCACACAGACCAACAGCTTaGCTATCTCTCTCAAAAGCCTCTCGCAGTTCTTTC +
Preference number: 6 (lower is better)
Translates to: ISGYWFSHRPTA*LSLSKASRSSF
Trigger: GAAAGAACTGCGAGAGGCTTTTGAGAGAGATAGCAAAGCTGTTGGTCTGTGTGAAAACCAGTACCCAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CAA 90 bp GATTTCAACATGGGACTGTCCTCCACCATTATACCTTCTTGTGTCTaGTGTCCTAGCTTTTGCTTGTACTGCTGCACAAATTCTGTGGAA +
Preference number: 6 (lower is better)
Translates to: DFNMGLSSTIIPSCV*CPSFCLYCCTNSVE
Trigger: TTCCACAGAATTTGTGCAGCAGTACAAGCAAAAGCTAGGACACAAGACACAAGAAGGTATAATGGTGGAGGACAGTCCCATGTTGAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS TCA 72 bp AGATCCATGTTTGCTAGCTTTAGTTGTAAGTTCAGGTaGGTCTCCATCACTAAGGTAACCACCTTTGCAGGA +
Preference number: 6 (lower is better)
Translates to: RSMFASFSCKFR*VSITKVTTFAG
Trigger: TCCTGCAAAGGTGGTTACCTTAGTGATGGAGACTCACCTGAACTTACAACTAAAGCTAGCAAACATGGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS CAA 90 bp ATTACATTTATATCTGGGTACTGGTTTTCACACAGACCAACAGCTTaGCTATCTCTCTCAAAAGCCTCTCGCAGTTCTTTCTTGACTGCT +
Preference number: 6 (lower is better)
Translates to: ITFISGYWFSHRPTA*LSLSKASRSSFLTA
Trigger: AGCAGTCAAGAAAGAACTGCGAGAGGCTTTTGAGAGAGATAGCAAAGCTGTTGGTCTGTGTGAAAACCAGTACCCAGATATAAATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 72 bp ACTGTAGACTCAACTGTCTGCATTGTCAAATATGTCTaGAATGTACACTCTTTGGACATGGGAATTGGCTGT +
Preference number: 6 (lower is better)
Translates to: TVDSTVCIVKYV*NVHSLDMGIGC
Trigger: ACAGCCAATTCCCATGTCCAAAGAGTGTACATTTCAGACATATTTGACAATGCAGACAGTTGAGTCTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 72 bp TTTTCTTCTTCCAGATTAAGAGGCCTCAGAGTACTCTaGTATAGCCAATTGCGTTTCTTTGAAACAGTGATG +
Preference number: 6 (lower is better)
Translates to: FSSSRLRGLRVL*YSQLRFFETVM
Trigger: CATCACTGTTTCAAAGAAACGCAATTGGCTATATCAGAGTACTCTGAGGCCTCTTAATCTGGAAGAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS CAA 72 bp CTTGATATACCAAGGTCATCATCCTCAGGAATGGGATaGTACCATATTTCTCCTTCATCATCTGCATCATTT +
Preference number: 6 (lower is better)
Translates to: LDIPRSSSSGMG*YHISPSSSASF
Trigger: AAATGATGCAGATGATGAAGGAGAAATATGGTACAATCCCATTCCTGAGGATGATGACCTTGGTATATCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS CAA 72 bp TTACTGAATCTACCTGAATTGCACAAAAGACGTCTTTaGAATCTATCCGAGGTGGTTTTAAATCCTCAGCAC +
Preference number: 6 (lower is better)
Translates to: LLNLPELHKRRL*NLSEVVLNPQH
Trigger: GTGCTGAGGATTTAAAACCACCTCGGATAGATTCAAAAGACGTCTTTTGTGCAATTCAGGTAGATTCAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS CAA 72 bp AATATGTCTGAAATGTACACTCTTTGGACATGGGAATaGGCTGTTCAATCATTACTTCTGGCCCATCCATTT +
Preference number: 6 (lower is better)
Translates to: NMSEMYTLWTWE*AVQSLLLAHPF
Trigger: AAATGGATGGGCCAGAAGTAATGATTGAACAGCCAATTCCCATGTCCAAAGAGTGTACATTTCAGACATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CAA 90 bp CATTCTCACAACCATTTGATGACATTTTCAAAGGACTTTTTGCCATaGCATCTAATACAGCCTCATAAAGCTGCTTTGTTATCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: HSHNHLMTFSKDFLP*HLIQPHKAALLSEE
Trigger: CTCCTCTGATAACAAAGCAGCTTTATGAGGCTGTATTAGATGCAATGGCAAAAAGTCCTTTGAAAATGTCATCAAATGGTTGTGAGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CAA 90 bp GCATTGTCAAATATGTCTGAAATGTACACTCTTTGGACATGGGAATaGGCTGTTCAATCATTACTTCTGGCCCATCCATTTTGCTATAAT +
Preference number: 6 (lower is better)
Translates to: ALSNMSEMYTLWTWE*AVQSLLLAHPFCYN
Trigger: ATTATAGCAAAATGGATGGGCCAGAAGTAATGATTGAACAGCCAATTCCCATGTCCAAAGAGTGTACATTTCAGACATATTTGACAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS TCA 72 bp TACTCTTTAGATGATTTGAGGAAAGACTGTGATAGCTaGTGTTTAGGTAGAGACACAGGTGAGATGGATAAA +
Preference number: 6 (lower is better)
Translates to: YSLDDLRKDCDS*CLGRDTGEMDK
Trigger: TTTATCCATCTCACCTGTGTCTCTACCTAAACATCAGCTATCACAGTCTTTCCTCAAATCATCTAAAGAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS TCA 72 bp ATAGAAATGTACACTCATGAGCCCAGATATGTACTGTaGACACTTAGGTTGATCAGAAAAGCTATAATGCCT +
Preference number: 6 (lower is better)
Translates to: IEMYTHEPRYVL*TLRLIRKAIMP
Trigger: AGGCATTATAGCTTTTCTGATCAACCTAAGTGTTCACAGTACATATCTGGGCTCATGAGTGTACATTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS CCA 72 bp TTTGGACATGGGAATTGGCTGTTCAATCATTACTTCTaGCCCATCCATTTTGCTATAATTTTCTCCGATTTT +
Preference number: 6 (lower is better)
Translates to: FGHGNWLFNHYF*PIHFAIIFSDF
Trigger: AAAATCGGAGAAAATTATAGCAAAATGGATGGGCCAGAAGTAATGATTGAACAGCCAATTCCCATGTCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CAA 72 bp TTGCCATTGCATCTAATACAGCCTCATAAAGCTGCTTaGTTATCAGAGGAGAAGGGAGTTCTCTTAAATAAT +
Preference number: 6 (lower is better)
Translates to: LPLHLIQPHKAA*LSEEKGVLLNN
Trigger: ATTATTTAAGAGAACTCCCTTCTCCTCTGATAACAAAGCAGCTTTATGAGGCTGTATTAGATGCAATGGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341460.6
CDS CAA 90 bp TTGCTTTGTTTACTGAATCTACCTGAATTGCACAAAAGACGTCTTTaGAATCTATCCGAGGTGGTTTTAAATCCTCAGCACCATAGAAAT +
Preference number: 6 (lower is better)
Translates to: LLCLLNLPELHKRRL*NLSEVVLNPQHHRN
Trigger: ATTTCTATGGTGCTGAGGATTTAAAACCACCTCGGATAGATTCAAAAGACGTCTTTTGTGCAATTCAGGTAGATTCAGTAAACAAAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234668.6
ENST00000341460.6
CDS GCA 72 bp CTGATTTCTAATTATAAGACCCATGAAGCTCTGTGTTaGAATATAAATTTGTGGAATCATCTAGCATGCTCT +
Preference number: 6 (lower is better)
Translates to: LISNYKTHEALC*NINLWNHLACS
Trigger: AGAGCATGCTAGATGATTCCACAAATTTATATTGCAACACAGAGCTTCATGGGTCTTATAATTAGAAATCAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234668.6