RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SYDE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000105137

Ensembl transcript IDs: ENST00000342784.7, ENST00000597977.5, ENST00000600252.5, ENST00000600440.5, ENST00000602203.1

Found 490 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGGCAACCAGGAGCTCGGCCTGAGCAACAGGTCTGGCTCTCCTTaGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTAC +
Preference number: 1 (lower is better)
Translates to: AGNQELGLSNRSGSP*SPGHRLSHWAPGPY
Trigger: GTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCTGTTGCTCAGGCCGAGCTCCTGGTTGCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR TCA 90 bp TCAGGGTGGCTGGGCACTGCAAACTGCTCCCTCCTCTGTGGTCCCTaGAAGAGCCCCACACGCCTGCTTCAGACGTGTCCACGCACACCA +
Preference number: 1 (lower is better)
Translates to: SGWLGTANCSLLCGP*KSPTRLLQTCPRTP
Trigger: TGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGGCTCTTTCAGGGACCACAGAGGAGGGAGCAGTTTGCAGTGCCCAGCCACCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR GCA 90 bp AGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTaGCCCGGCCAAGGGGAGGCAAGAGAGGCCAGCCTAGCAAGCGCG +
Preference number: 1 (lower is better)
Translates to: RGDSPHQGDAHSNWC*PGQGEAREASLASA
Trigger: CGCGCTTGCTAGGCTGGCCTCTCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR CCA 90 bp GGGGATTTCAGGGTGGCTGGGCACTGCAAACTGCTCCCTCCTCTGTaGTCCCTGAAAGAGCCCCACACGCCTGCTTCAGACGTGTCCACG +
Preference number: 1 (lower is better)
Translates to: GDFRVAGHCKLLPPL*SLKEPHTPASDVST
Trigger: CGTGGACACGTCTGAAGCAGGCGTGTGGGGCTCTTTCAGGGACCACAGAGGAGGGAGCAGTTTGCAGTGCCCAGCCACCCTGAAATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR CCA 90 bp CCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTaGTGTTGCCCCGGCCAAGGGGAGGCAAGAGAGGCCAGCCTAGCA +
Preference number: 1 (lower is better)
Translates to: PTRGDSPHQGDAHSN*CCPGQGEAREASLA
Trigger: TGCTAGGCTGGCCTCTCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR CCA 90 bp CTCTGGGGCCCACTGAGGCACCATTATTGGGGATTTCAGGGTGGCTaGGCACTGCAAACTGCTCCCTCCTCTGTGGTCCCTGAAAGAGCC +
Preference number: 1 (lower is better)
Translates to: LWGPLRHHYWGFQGG*ALQTAPSSVVPERA
Trigger: GGCTCTTTCAGGGACCACAGAGGAGGGAGCAGTTTGCAGTGCCCAGCCACCCTGAAATCCCCAATAATGGTGCCTCAGTGGGCCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR CCA 90 bp CGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATTaGGGATTTCAGGGTGGCTGGGCACTGCAAACTGCTCCCTCCTCT +
Preference number: 1 (lower is better)
Translates to: RTLPLELWGPLRHHY*GFQGGWALQTAPSS
Trigger: AGAGGAGGGAGCAGTTTGCAGTGCCCAGCCACCCTGAAATCCCCAATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR TCA 90 bp AGACAGGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTaGGGCACCATTATTGGGGATTTCAGGGTGGCTGGGCACTGCAAA +
Preference number: 1 (lower is better)
Translates to: RQEGTVLSHWNSGAH*GTIIGDFRVAGHCK
Trigger: TTTGCAGTGCCCAGCCACCCTGAAATCCCCAATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR CCA 90 bp AAGAAGAGGGAGACAGGAGGGAACCGTACTCTCCCACTGGAACTCTaGGGCCCACTGAGGCACCATTATTGGGGATTTCAGGGTGGCTGG +
Preference number: 1 (lower is better)
Translates to: KKRETGGNRTLPLEL*GPLRHHYWGFQGGW
Trigger: CCAGCCACCCTGAAATCCCCAATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCCTGTCTCCCTCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR TCA 90 bp GACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGAATaGGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGG +
Preference number: 1 (lower is better)
Translates to: DLATSVQIPGPGNWE*VSAIHATGPVVTRW
Trigger: CCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR CCA 90 bp CCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTGATTTaGTTGGCAGCAGCAAGAGGGCCGACTAGAGGTGACTCACCACAC +
Preference number: 1 (lower is better)
Translates to: PREGETVQCSKLILI*LAAARGPTRGDSPH
Trigger: GTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTGCTGCCAACCAAATCAGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR TCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGAACCAGGAGCTCGGCCTaGGCAACAGGTCTGGCTCTC +
Preference number: 2 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARTRSSA*ATGLAL
Trigger: GAGAGCCAGACCTGTTGCTCAGGCCGAGCTCCTGGT...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR TCA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATCTCCTCTGTGGTCCCTaGAAGAGCCCCACACGCCTG +
Preference number: 2 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYLLCGP*KSPTRL
Trigger: CAGGCGTGTGGGGCTCTTTCAGGGACCACAGAGGAG...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR TCA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACCAGGAGCTCGGCCTaGGCAACAGGTCTGGCTCTC +
Preference number: 2 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVTRSSA*ATGLAL
Trigger: GAGAGCCAGACCTGTTGCTCAGGCCGAGCTCCTGGT...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR TCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGACCAGGAGCTCGGCCTaGGCAACAGGTCTGGCTCTC +
Preference number: 2 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPTRSSA*ATGLAL
Trigger: GAGAGCCAGACCTGTTGCTCAGGCCGAGCTCCTGGT...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGACCTGAGCAACAGGTCTaGCTCTCCTTGGTCACCAGG +
Preference number: 2 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARPEQQV*LSLVTR
Trigger: CCTGGTGACCAAGGAGAGCCAGACCTGTTGCTCAGG...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAAGCCATACACGCGACTaGTCCCGTGGTAACTCGCTG +
Preference number: 2 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQSHTRD*SRGNSL
Trigger: CAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCT...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR TCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAACCTGGAAACTGGGAATaGGTCTCAGCCATACACGCG +
Preference number: 2 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQPGNWE*VSAIHA
Trigger: CGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGG...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCAGGTCTGGCTCTCCTTaGTCACCAGGGCACCGCCTT +
Preference number: 2 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPRSGSP*SPGHRL
Trigger: AAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp GAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTCCTGAGCAACAGGTCTaGCTCTCCTTGGTCACCAGG +
Preference number: 2 (lower is better)
Translates to: EGRLEVTHHTRVMLTVTGPEQQV*LSLVTR
Trigger: CCTGGTGACCAAGGAGAGCCAGACCTGTTGCTCAGG...ACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGACCCAGGCCCCAGACTTaGCAACTAGTGTCCAAATAC +
Preference number: 2 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARPRPQT*QLVSKY
Trigger: GTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAACCCAGGCCCCAGACTTaGCAACTAGTGTCCAAATAC +
Preference number: 2 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQPRPQT*QLVSKY
Trigger: GTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATGATGGTCACAACCGCTaGTCCCTAAAATCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYDGHNR*SLKSPG
Trigger: GCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATC...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACAGATGGTCACAACCGCTaGTCCCTAAAATCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTDGHNR*SLKSPG
Trigger: GCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATC...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR GCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGCACAGTAACTGGTGTTaGCCCGGCCAAGGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: PQTVPHASLCVVQGREKQHSNWC*PGQGEA
Trigger: TGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTG...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCCCAAATACCGGGCCCTaGAAACTGGGAATGAGTCTC +
Preference number: 2 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPPNTGP*KLGMSL
Trigger: GAGACTCATTCCCAGTTTCCAGGGCCCGGTATTTGG...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTACCAAATACCGGGCCCTaGAAACTGGGAATGAGTCTC +
Preference number: 2 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVPNTGP*KLGMSL
Trigger: GAGACTCATTCCCAGTTTCCAGGGCCCGGTATTTGG...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR TCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACAGTTATCTCCATTTGCTaGCTAGAGGCCAATCGTGGG +
Preference number: 2 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTVISIC*LEANRG
Trigger: CCCACGATTGGCCTCTAGTCAGCAAATGGAGATAAC...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGAGCCATACACGCGACTaGTCCCGTGGTAACTCGCTG +
Preference number: 2 (lower is better)
Translates to: PQTVPHASLCVVQGREKQSHTRD*SRGNSL
Trigger: CAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCT...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACAAAAGGGGAAGCCCTTaGTGCTCAGGAAAGATGGTC +
Preference number: 2 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNKRGSP*CSGKMV
Trigger: GACCATCTTTCCTGAGCACCAAGGGCTTCCCCTTTT...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGGATGCTCACAGTAACTaGTGTTGCCCCGGCCAAGGG +
Preference number: 2 (lower is better)
Translates to: PQTVPHASLCVVQGREKQDAHSN*CCPGQG
Trigger: CCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATC...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGGATGCTCACAGTAACTaGTGTTGCCCCGGCCAAGGG +
Preference number: 2 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLDAHSN*CCPGQG
Trigger: CCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATC...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR CAA 90 bp AGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTGATTTGGTaGGCAGCAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAG +
Preference number: 2 (lower is better)
Translates to: REGETVQCSKLILIW*AAARGPTRGDSPHQ
Trigger: CTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTGCTGCCAACCAAATCAGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGGGTGCTCAGGAAAGATaGTCACAACCGCTGGTCCCT +
Preference number: 2 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLGAQER*SQPLVP
Trigger: AGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACC...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGACTAGAGGCCAATCGTaGGGACTTCCCCGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLTRGQS*GLPRKR
Trigger: CCTTTTCCGGGGAAGTCCCCACGATTGGCCTCTAGT...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR TCA 90 bp GTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTCCTGGAAACTGGGAATaGGTCTCAGCCATACACGCG +
Preference number: 2 (lower is better)
Translates to: VFVSSKGGRNSAVLKANTPGNWE*VSAIHA
Trigger: CGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGG...AGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp GTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTGATGGTCACAACCGCTaGTCCCTAAAATCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: VFVSSKGGRNSAVLKANTDGHNR*SLKSPG
Trigger: GCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATC...AGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGAAAAGGGGAAGCCCTTaGTGCTCAGGAAAGATGGTC +
Preference number: 2 (lower is better)
Translates to: PQTVPHASLCVVQGREKQKRGSP*CSGKMV
Trigger: GACCATCTTTCCTGAGCACCAAGGGCTTCCCCTTTT...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR GCA 90 bp GTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTAGGGGAAGCCCTTGGTaGTCAGGAAAGATGGTCACA +
Preference number: 2 (lower is better)
Translates to: VFVSSKGGRNSAVLKANTRGSPW*SGKMVT
Trigger: TGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCCT...AGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGCAAGGAGATGGGGATTaGAAAGGCCAGACTCTGTTA +
Preference number: 2 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLQGDGD*KGQTLL
Trigger: TAACAGAGTCTGGCCTTTCCAATCCCCATCTCCTTG...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR GCA 90 bp ACCTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGCACAGTAACTGGTGTTaGCCCGGCCAAGGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: TCAYLFIIHKDGGAEKKRHSNWC*PGQGEA
Trigger: TGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTG...CCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp ACCTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGAGGTCTGGCTCTCCTTaGTCACCAGGGCACCGCCTT +
Preference number: 2 (lower is better)
Translates to: TCAYLFIIHKDGGAEKKRRSGSP*SPGHRL
Trigger: AAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT...CCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp CTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGGAAGGTCTGGCTCTCCTTaGTCACCAGGGCACCGCCTT +
Preference number: 2 (lower is better)
Translates to: LCIFIYYPQRWRCGKEEGRSGSP*SPGHRL
Trigger: AAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT...TCCCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR GCA 90 bp CTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGGATGTTCCGTACCAGACTaGCCCCAGCCTGACGCTTCA +
Preference number: 2 (lower is better)
Translates to: LCIFIYYPQRWRCGKEEGCSVPD*PQPDAS
Trigger: TGAAGCGTCAGGCTGGGGGCAGTCTGGTACGGAACA...TCCCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR GCA 90 bp CTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGGAAGGGGAAGCCCTTGGTaGTCAGGAAAGATGGTCACA +
Preference number: 2 (lower is better)
Translates to: LCIFIYYPQRWRCGKEEGRGSPW*SGKMVT
Trigger: TGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCCT...TCCCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CCA 90 bp ACCTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGCCCAGGCCCCAGACTTaGCAACTAGTGTCCAAATAC +
Preference number: 2 (lower is better)
Translates to: TCAYLFIIHKDGGAEKKRPRPQT*QLVSKY
Trigger: GTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG...CCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR CCA 72 bp CAGGAGCTCGGCCTGAGCAACAGGTCTGGCTCTCCTTaGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCC +
Preference number: 3 (lower is better)
Translates to: QELGLSNRSGSP*SPGHRLSHWAP
Trigger: GGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCTGTTGCTCAGGCCGAGCTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR GCA 72 bp CCCTCCTCTGTGGTCCCTGAAAGAGCCCCACACGCCTaGTTCAGACGTGTCCACGCACACCAGTCCTCACAG +
Preference number: 3 (lower is better)
Translates to: PSSVVPERAPHA*FRRVHAHQSSQ
Trigger: CTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGGCTCTTTCAGGGACCACAGAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR CCA 72 bp GGTGACTCACCACACCAGGGTGATGCTCACAGTAACTaGTGTTGCCCCGGCCAAGGGGAGGCAAGAGAGGCC +
Preference number: 3 (lower is better)
Translates to: GDSPHQGDAHSN*CCPGQGEAREA
Trigger: GGCCTCTCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR GCA 72 bp TCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTaGCCCGGCCAAGGGGAGGCAAGAGAGGCCAGCCTA +
Preference number: 3 (lower is better)
Translates to: SPHQGDAHSNWC*PGQGEAREASL
Trigger: TAGGCTGGCCTCTCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR TCA 72 bp GGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTaGGGCACCATTATTGGGGATTTCAGGGTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: GTVLSHWNSGAH*GTIIGDFRVAG
Trigger: CCCAGCCACCCTGAAATCCCCAATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR CCA 72 bp GGGCCCACTGAGGCACCATTATTGGGGATTTCAGGGTaGCTGGGCACTGCAAACTGCTCCCTCCTCTGTGGT +
Preference number: 3 (lower is better)
Translates to: GPTEAPLLGISG*LGTANCSLLCG
Trigger: ACCACAGAGGAGGGAGCAGTTTGCAGTGCCCAGCCACCCTGAAATCCCCAATAATGGTGCCTCAGTGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CAA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACCCCAGGCCCCAGACTaGGCAACTAGTGTCCAAATA +
Preference number: 3 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTPQAPD*ATSVQI
Trigger: TATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGGG...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CAA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGCAGGTCTGGCTCTCCTaGGTCACCAGGGCACCGCCT +
Preference number: 3 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLQVWLS*VTRAPP
Trigger: AGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCTG...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CAA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACAGCAAGGAGATGGGGATaGGAAAGGCCAGACTCTGTT +
Preference number: 3 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTARRWG*ERPDSV
Trigger: AACAGAGTCTGGCCTTTCCAATCCCCATCTCCTTGC...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CAA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTACCCCAGGCCCCAGACTaGGCAACTAGTGTCCAAATA +
Preference number: 3 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVPQAPD*ATSVQI
Trigger: TATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGGG...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR CCA 72 bp GAGACAGGAGGGAACCGTACTCTCCCACTGGAACTCTaGGGCCCACTGAGGCACCATTATTGGGGATTTCAG +
Preference number: 3 (lower is better)
Translates to: ETGGNRTLPLEL*GPLRHHYWGFQ
Trigger: CTGAAATCCCCAATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CAA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACACAAAAGGGGAAGCCCTaGGTGCTCAGGAAAGATGGT +
Preference number: 3 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTQKGKP*VLRKDG
Trigger: ACCATCTTTCCTGAGCACCAAGGGCTTCCCCTTTTG...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR TCA 72 bp ACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGAATaGGTCTCAGCCATACACGCGACTGGTCCCGTGGTA +
Preference number: 3 (lower is better)
Translates to: TSVQIPGPGNWE*VSAIHATGPVV
Trigger: TACCACGGGACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTTGGACACTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CAA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACACTCTGTTATCTCCATTaGCTGACTAGAGGCCAATCG +
Preference number: 3 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTLCYLH*LTRGQS
Trigger: CGATTGGCCTCTAGTCAGCAAATGGAGATAACAGAG...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CAA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACAAAAGCTAATACTGATTaGGTTGGCAGCAGCAAGAGG +
Preference number: 3 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTKANTD*VGSSKR
Trigger: CCTCTTGCTGCTGCCAACCAAATCAGTATTAGCTTT...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR TCA 72 bp GGATTGGAAAGGCCAGACTCTGTTATCTCCATTTGCTaGCTAGAGGCCAATCGTGGGGACTTCCCCGGAAAA +
Preference number: 3 (lower is better)
Translates to: GLERPDSVISIC*LEANRGDFPGK
Trigger: TTTTCCGGGGAAGTCCCCACGATTGGCCTCTAGTCAGCAAATGGAGATAACAGAGTCTGGCCTTTCCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CAA 90 bp CTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGGACAGGTCTGGCTCTCCTaGGTCACCAGGGCACCGCCT +
Preference number: 3 (lower is better)
Translates to: LCIFIYYPQRWRCGKEEGQVWLS*VTRAPP
Trigger: AGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCTG...TCCCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR-3UTR CAA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGAAAGCTAATACTGATTaGGTTGGCAGCAGCAAGAGG +
Preference number: 3 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLKANTD*VGSSKR
Trigger: CCTCTTGCTGCTGCCAACCAAATCAGTATTAGCTTT...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
3UTR GCA 72 bp TCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTaGTCAAAGCTAATACTGATTTGGTTGGCAGCAGCA +
Preference number: 3 (lower is better)
Translates to: SLCRPREGETVQ*SKLILIWLAAA
Trigger: TGCTGCTGCCAACCAAATCAGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGCGGCGGGCTCCCCAGTaGCAGGTACCCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: LGHQGTALATGRPVLTNRRRAPQ*QVPQAL
Trigger: TAGGGCCTGGGGTACCTGGCACTGGGGAGCCCGCCG...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600252.5
CDS-3UTR GCA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGTGGGCAGCAGCACGGTaGCCTGGGCACAGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LGHQGTALATGRPVLTNRWAAAR*PGHRAG
Trigger: ACCGGCCCTGTGCCCAGGGCACCGTGCTGCTGCCCA...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AGGTCTGGCTCTCCTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTAGGGCCGGAAGGAGGTaGGTGATGGGGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RSGSPWSPGHRLSHWAPGRAGRR*VMGAQL
Trigger: CAGCTGGGCCCCCATCACCCACCTCCTTCCGGCCCT...ACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AGGTCTGGCTCTCCTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCGCACGGCCAGCTGTTaGGCCTGGCACCCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: RSGSPWSPGHRLSHWAPGRTASC*AWHPRK
Trigger: CTTCCGAGGGTGCCAGGCCCAACAGCTGGCCGTGCG...ACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS-3UTR CCA 90 bp AGGTCTGGCTCTCCTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTACCCTCGGAAGACCGTaGGCAGCAGCACGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RSGSPWSPGHRLSHWAPGTLGRP*AAARCP
Trigger: AGGGCACCGTGCTGCTGCCCACGGTCTTCCGAGGGT...ACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS-3UTR CCA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGCGCACGGCCAGCTGTTaGGCCTGGCACCCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LGHQGTALATGRPVLTNRRTASC*AWHPRK
Trigger: CTTCCGAGGGTGCCAGGCCCAACAGCTGGCCGTGCG...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS-3UTR CCA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGCGCGGGGCTCAGCTGTaGCAGGGGCTTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGHQGTALATGRPVLTNRRGAQL*QGLPAA
Trigger: AGCAGCAGGAAGCCCCTGCCACAGCTGAGCCCCGCG...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCGCGGGAGGCTTTGGTTaGGGGGCTGGCGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSAGGFG*GAGGGC
Trigger: GCAGCCCCCGCCAGCCCCCCAACCAAAGCCTCCCGC...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGGCCCTGTTCGGGCCCTaGCCTCCCCATCCACTTGCA +
Preference number: 4 (lower is better)
Translates to: LGHQGTALATGRPVLTNRALFGP*PPHPLA
Trigger: TGCAAGTGGATGGGGAGGCCAGGGCCCGAACAGGGC...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGACCCTCGGAAGACCGTaGGCAGCAGCACGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LGHQGTALATGRPVLTNRTLGRP*AAARCP
Trigger: AGGGCACCGTGCTGCTGCCCACGGTCTTCCGAGGGT...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS-3UTR CCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGGGCACGAGGCCTTGTaGGCGCCTGGCGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQGHEAL*APGVPA
Trigger: TGCCGGCACGCCAGGCGCCCACAAGGCCTCGTGCCC...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACGTACAGGTGCAGGCTaGGGCGGCCCCAGAGTGCGG +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTRTGAG*GGPRVR
Trigger: CCGCACTCTGGGGCCGCCTCAGCCTGCACCTGTACG...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCGCATACAGCAGCCCCTaGGGCTCCAGGCGCACGGCC +
Preference number: 4 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSAYSSP*GSRRTA
Trigger: GGCCGTGCGCCTGGAGCCTCAGGGGCTGCTGTATGC...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGGCTGGAGGGCCCCTCTaGTCCGGCCTGGGACCCTTC +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGAGGPL*SGLGPF
Trigger: GAAGGGTCCCAGGCCGGAGCAGAGGGGCCCTCCAGC...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600252.5
CDS-3UTR GCA 90 bp AGGTCTGGCTCTCCTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCGTCCTCGCTGTCACTaGCCGTCACGTGGTCGTAGT +
Preference number: 4 (lower is better)
Translates to: RSGSPWSPGHRLSHWAPGRPRCH*PSRGRS
Trigger: ACTACGACCACGTGACGGGCAGTGACAGCGAGGACG...ACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGACTGGCTCTGGAGGGCTaGGCTCTGGGCGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARLALEG*ALGAGL
Trigger: CAGCCCAGCGCCCAGAGCCCAGCCCTCCAGAGCCAG...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600252.5
CDS-3UTR CCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACCCTCTGCTCCGGCCTaGGACCCTTCGGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTPSAPA*DPSGAW
Trigger: CCAGGCTCCCGAAGGGTCCCAGGCCGGAGCAGAGGG...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600252.5
CDS-3UTR CCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGGCGGGAGGCTTTGGTTaGGGGGCTGGCGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRAGGFG*GAGGGC
Trigger: GCAGCCCCCGCCAGCCCCCCAACCAAAGCCTCCCGC...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGGGCCCTTTCCACATCTaGCAGGCAGCTGAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LGHQGTALATGRPVLTNRGPFHI*QAAEEP
Trigger: GGGCTCCTCAGCTGCCTGCCAGATGTGGAAAGGGCC...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGGCCTTGTGGGCGCCTaGCGTGCCGGCAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQGLVGA*RAGSST
Trigger: TGTGCTGCTGCCGGCACGCCAGGCGCCCACAAGGCC...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGAGGCCTTGTGGGCGCCTaGCGTGCCGGCAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARGLVGA*RAGSST
Trigger: TGTGCTGCTGCCGGCACGCCAGGCGCCCACAAGGCC...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATGGGCACGAGGCCTTGTaGGCGCCTGGCGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYGHEAL*APGVPA
Trigger: TGCCGGCACGCCAGGCGCCCACAAGGCCTCGTGCCC...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAATGCACTGGCAAGGCCTaGGCCGGAGCTGCGGGCACG +
Preference number: 4 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQCTGKA*AGAAGT
Trigger: CGTGCCCGCAGCTCCGGCCCAGGCCTTGCCAGTGCA...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGGGGAGAAGGTTTTCCTaGGTAGCGGCTCGGCCATGC +
Preference number: 4 (lower is better)
Translates to: LGHQGTALATGRPVLTNRGRRFS*VAARPC
Trigger: GCATGGCCGAGCCGCTACTCAGGAAAACCTTCTCCC...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS-3UTR TCA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATGCATACAGCAGCCCCTaGGGCTCCAGGCGCACGGCC +
Preference number: 4 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYAYSSP*GSRRTA
Trigger: GGCCGTGCGCCTGGAGCCTCAGGGGCTGCTGTATGC...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGCATCTGGCAGGCAGCTaGGGAGCCCTCGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGHLAGS*GALGCP
Trigger: AGGGCACCCGAGGGCTCCTCAGCTGCCTGCCAGATG...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACAGGCCCGGGGACTTGGTaGGGGAGGCTTTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTGPGTW*GRLWLG
Trigger: CCCCAACCAAAGCCTCCCGCACCAAGTCCCCGGGCC...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGACCGAGACCGTACAGGTaGAGGCTGAGGCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARPRPYR*RLRRPQ
Trigger: CTGGGGCCGCCTCAGCCTGCACCTGTACGGTCTCGG...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACATGGGCACAGGGCCGGTaGCTTCTCACGCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTWAQGR*LLTPGS
Trigger: GGACCCTGGCGTGAGAAGGCACCGGCCCTGTGCCCA...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGGCCTGGGCCGGAGCTaGGGGCACGAGGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPGLGRS*GHEALW
Trigger: CCACAAGGCCTCGTGCCCGCAGCTCCGGCCCAGGCC...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACGGCCTGGGCCGGAGCTaGGGGCACGAGGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNGLGRS*GHEALW
Trigger: CCACAAGGCCTCGTGCCCGCAGCTCCGGCCCAGGCC...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGCGTCCTCGCTGTCACTaGCCGTCACGTGGTCGTAGT +
Preference number: 4 (lower is better)
Translates to: LGHQGTALATGRPVLTNRRPRCH*PSRGRS
Trigger: ACTACGACCACGTGACGGGCAGTGACAGCGAGGACG...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGCTGGCTCTGGAGGGCTaGGCTCTGGGCGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRLALEG*ALGAGL
Trigger: CAGCCCAGCGCCCAGAGCCCAGCCCTCCAGAGCCAG...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600252.5
CDS-3UTR CCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGGACCCTTCGGGAGCCTaGGGCTCTGGCTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGDPSGA*GSGSGG
Trigger: CCCTCCAGAGCCAGAGCCCCAGGCTCCCGAAGGGTC...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600252.5
CDS-3UTR CCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACGCGGGGGCTGCACCTTaGGGGGCCAGGCCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNAGAAP*GARPSD
Trigger: GTCAGAGGGCCTGGCCCCCCAAGGTGCAGCCCCCGC...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS-3UTR CCA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCCGGGGCCCGGGGACTTaGTGCGGGAGGCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSRGPGT*CGRLWL
Trigger: CAACCAAAGCCTCCCGCACCAAGTCCCCGGGCCCCG...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGTTATGGAGAGGCGCCTaGCGGGGCCCGGGGACTTGG +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGLWRGA*RGPGTW
Trigger: CCAAGTCCCCGGGCCCCGCCAGGCGCCTCTCCATAA...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAAGGGCCGGAAGGAGGTaGGTGATGGGGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQRAGRR*VMGAQL
Trigger: CAGCTGGGCCCCCATCACCCACCTCCTTCCGGCCCT...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGTCCAGGTGGAAGGTGTaGTCCAGCCGCAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LGHQGTALATGRPVLTNRSRWKV*SSRRKS
Trigger: GGACTTCCTGCGGCTGGACCACACCTTCCACCTGGA...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACAAGCAGCACGGTGCCCTaGGCACAGGGCCGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTSSTVP*AQGRCL
Trigger: AAGGCACCGGCCCTGTGCCCAGGGCACCGTGCTGCT...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACGCGGGGCTCAGCTGTaGCAGGGGCTTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTRGAQL*QGLPAA
Trigger: AGCAGCAGGAAGCCCCTGCCACAGCTGAGCCCCGCG...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACGGGCACGAGGCCTTGTaGGCGCCTGGCGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNGHEAL*APGVPA
Trigger: TGCCGGCACGCCAGGCGCCCACAAGGCCTCGTGCCC...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AGGTCTGGCTCTCCTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTGATGCTCACAGTAACTaGTGTTGCCCCGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: RSGSPWSPGHRLSHWAPGDAHSN*CCPGQG
Trigger: CCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATC...ACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AGGTCTGGCTCTCCTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTAGCTTGTTCTTACCTTaGGGGGCCAGGCCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: RSGSPWSPGHRLSHWAPGSLFLP*GARPSD
Trigger: GTCAGAGGGCCTGGCCCCCCAAGGTAAGAACAAGCT...ACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR TCA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCGTGAGTCCCCGTCGCTaGGGTAACCGGCCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPVSPRR*GNRPSG
Trigger: GCCCGAGGGCCGGTTACCTCAGCGACGGGGACTCAC...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTACGTACAGGTGCAGGCTaGGGCGGCCCCAGAGTGCGG +
Preference number: 4 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVRTGAG*GGPRVR
Trigger: CCGCACTCTGGGGCCGCCTCAGCCTGCACCTGTACG...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACACGTACAGGTGCAGGCTaGGGCGGCCCCAGAGTGCGG +
Preference number: 4 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTRTGAG*GGPRVR
Trigger: CCGCACTCTGGGGCCGCCTCAGCCTGCACCTGTACG...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCATACAGCAGCCCCTaGGGCTCCAGGCGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPAYSSP*GSRRTA
Trigger: GGCCGTGCGCCTGGAGCCTCAGGGGCTGCTGTATGC...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGGATTCAGGTGCGGGTTaGAGGGCGCATCGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: LGHQGTALATGRPVLTNRDSGAG*RAHRSR
Trigger: ACGACTTCGATGCGCCCTTCAACCCGCACCTGAATC...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCTGGAGGGCCCCTCTaGTCCGGCCTGGGACCCTTC +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPAGGPL*SGLGPF
Trigger: GAAGGGTCCCAGGCCGGAGCAGAGGGGCCCTCCAGC...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600252.5
CDS-3UTR GCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGTGGGCAGCAGCACGGTaGCCTGGGCACAGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPWAAAR*PGHRAG
Trigger: ACCGGCCCTGTGCCCAGGGCACCGTGCTGCTGCCCA...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAACACCACTTCGGGGTCTaGCAGCGGCAGGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQHHFGV*QRQVQR
Trigger: CCTCTGCACCTGCCGCTGGCAGACCCCGAAGTGGTG...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGCACCACTTCGGGGTCTaGCAGCGGCAGGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGHHFGV*QRQVQR
Trigger: CCTCTGCACCTGCCGCTGGCAGACCCCGAAGTGGTG...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCCTCTGGGCGCTGGGCTaGGTGGCCGCGCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KYRALETGNESQPYTRLVLWALG*VAALLG
Trigger: GCCAAGGAGCGCGGCCACCCAGCCCAGCGCCCAGAG...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342784.7
CDS-3UTR CCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACCCCTCTGCTCCGGCCTaGGACCCTTCGGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNPSAPA*DPSGAW
Trigger: CCAGGCTCCCGAAGGGTCCCAGGCCGGAGCAGAGGG...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600252.5
CDS-3UTR CCA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCCGGGGGCTCAGGTGCTaGAGGTCTGGGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSRGLRC*RSGVFL
Trigger: GAGGAAGACCCCAGACCTCCAGCACCTGAGCCCCCG...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAACGGGGGCTCAGGTGCTaGAGGTCTGGGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQRGLRC*RSGVFL
Trigger: GAGGAAGACCCCAGACCTCCAGCACCTGAGCCCCCG...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCGCGGGAGGCTTTGGTTaGGGGGCTGGCGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KYRALETGNESQPYTRLVAGGFG*GAGGGC
Trigger: GCAGCCCCCGCCAGCCCCCCAACCAAAGCCTCCCGC...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATCGGGGCCCGGGGACTTaGTGCGGGAGGCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYRGPGT*CGRLWL
Trigger: CAACCAAAGCCTCCCGCACCAAGTCCCCGGGCCCCG...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGAGCCTCCAGCTCCAGGTaGAAGGTGTGGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARASSSR*KVWSSR
Trigger: GCGGCTGGACCACACCTTCCACCTGGAGCTGGAGGC...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACAGCCAGCTGTTGGGCCTaGCACCCTCGGAAGACCGTG +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTASCWA*HPRKTV
Trigger: CACGGTCTTCCGAGGGTGCCAGGCCCAACAGCTGGC...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS-3UTR CCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACATGCACTGGCAAGGCCTaGGCCGGAGCTGCGGGCACG +
Preference number: 4 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTCTGKA*AGAAGT
Trigger: CGTGCCCGCAGCTCCGGCCCAGGCCTTGCCAGTGCA...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGGGATTTCAGGGTGGCTaGGCACTGCAAACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LGHQGTALATGRPVLTNRGFQGG*ALQTAP
Trigger: GGGAGCAGTTTGCAGTGCCCAGCCACCCTGAAATCC...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGAGCTGGGCGCTCCGGTaGGTCCCCGTCGCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPSWALR*VPVAEV
Trigger: TACCTCAGCGACGGGGACTCACCGGAGCGCCCAGCT...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp GAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTCATCTGGCAGGCAGCTaGGGAGCCCTCGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: EGRLEVTHHTRVMLTVTGHLAGS*GALGCP
Trigger: AGGGCACCCGAGGGCTCCTCAGCTGCCTGCCAGATG...ACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACAACCAGGAGCTCGGCCTaGGCAACAGGTCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTTRSSA*ATGLAL
Trigger: GAGAGCCAGACCTGTTGCTCAGGCCGAGCTCCTGGT...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGCTCCTCTGTGGTCCCTaGAAGAGCCCCACACGCCTG +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGLLCGP*KSPTRL
Trigger: CAGGCGTGTGGGGCTCTTTCAGGGACCACAGAGGAG...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCAGAGAGCAAGGGGAGTaGGACCCACCCAGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSREQGE*DPPSPS
Trigger: TGAGGGGCTGGGTGGGTCTCACTCCCCTTGCTCTCT...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR GCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACCCGAGACCGTACAGGTaGAGGCTGAGGCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNPRPYR*RLRRPQ
Trigger: CTGGGGCCGCCTCAGCCTGCACCTGTACGGTCTCGG...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACACCGAGACCGTACAGGTaGAGGCTGAGGCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTPRPYR*RLRRPQ
Trigger: CTGGGGCCGCCTCAGCCTGCACCTGTACGGTCTCGG...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGGCACAGGGCCGGTaGCTTCTCACGCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNWAQGR*LLTPGS
Trigger: GGACCCTGGCGTGAGAAGGCACCGGCCCTGTGCCCA...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp AGGTCTGGCTCTCCTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTAGGGGAAGCCCTTGGTaGTCAGGAAAGATGGTCACA +
Preference number: 4 (lower is better)
Translates to: RSGSPWSPGHRLSHWAPGRGSPW*SGKMVT
Trigger: TGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCCT...ACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGTTGATGCCTCGGGGCTaGAGGGCCCCTCTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPLMPRG*RAPLLR
Trigger: CCGGAGCAGAGGGGCCCTCCAGCCCCGAGGCATCAA...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600252.5
CDS-3UTR CCA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCCCCATCGGCGGCTACTaGGCTCCAGGCTTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSPIGGY*APGFAG
Trigger: ACCTGCAAAGCCTGGAGCCCAGTAGCCGCCGATGGG...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600252.5
CDS-3UTR CCA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCCGGGGCCCGGGGACTTaGTGCGGGAGGCTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPRGPGT*CGRLWL
Trigger: CAACCAAAGCCTCCCGCACCAAGTCCCCGGGCCCCG...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACATTATGGAGAGGCGCCTaGCGGGGCCCGGGGACTTGG +
Preference number: 4 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTLWRGA*RGPGTW
Trigger: CCAAGTCCCCGGGCCCCGCCAGGCGCCTCTCCATAA...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACCGCGGGGCTCAGCTGTaGCAGGGGCTTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNRGAQL*QGLPAA
Trigger: AGCAGCAGGAAGCCCCTGCCACAGCTGAGCCCCGCG...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGGGGGGTCCCGGGCCATaGCCTCCAGTACCACCTTAT +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGGGPGP*PPVPPY
Trigger: ATAAGGTGGTACTGGAGGCCATGGCCCGGGACCCCC...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
62% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGGGTGCCCTCAGTGGTaGGGGGAACTCTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQGCPQW*GELCLG
Trigger: CCCCAAACAGAGTTCCCCCCACCACTGAGGGCACCC...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGGCCCTTTCCACATCTaGCAGGCAGCTGAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQGPFHI*QAAEEP
Trigger: GGGCTCCTCAGCTGCCTGCCAGATGTGGAAAGGGCC...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGGAGACGAGGCGCAGGTaGTCCAGGAGAAGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGETRRR*SRRSVS
Trigger: GCTGACGCTTCTCCTGGACCACCTGCGCCTCGTCTC...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGGGCAGGCGGGGATCTaGCCAAGACTGCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQGQAGI*PRLQQV
Trigger: TACCTGCTGCAGTCTTGGCCAGATCCCCGCCTGCCC...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AGGTCTGGCTCTCCTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCCAGGCCCCAGACTTaGCAACTAGTGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: RSGSPWSPGHRLSHWAPGPRPQT*QLVSKY
Trigger: GTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG...ACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCGGGCGCTGGGCTGGGTaGCCTGGCAGAGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKIGRWAG*PGREQG
Trigger: CCCTTGCTCTCTGCCAGGCCACCCAGCCCAGCGCCC...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAATACCTCGGAAGACCGTaGGCAGCAGCACGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQYLGRP*AAARCP
Trigger: AGGGCACCGTGCTGCTGCCCACGGTCTTCCGAGGTA...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACCGCACGGCCAGCTGTTaGGCCTGGCACCCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNRTASC*AWHPED
Trigger: GTCCTCAGGGTGCCAGGCCCAACAGCTGGCCGTGCG...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR TCA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGCTCAGAGGCACACGTTaGTTTGCTTGGAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LGHQGTALATGRPVLTNRLRGTR*FAWRAL
Trigger: GAGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAG...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGCTCCTCTGTGGTCCCTaGAAGAGCCCCACACGCCTG +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRLLCGP*KSPTRL
Trigger: CAGGCGTGTGGGGCTCTTTCAGGGACCACAGAGGAG...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGTGGGAGGAGGGAGTGTaGGGCTGGTGCTACCCTGAA +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGWEEGV*GWCYPE
Trigger: TTCAGGGTAGCACCAGCCTCACACTCCCTCCTCCCA...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR TCA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATTCCTCTGGGAGCATCTaGCGGGGTGGGGATGTGAGG +
Preference number: 4 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYSSGSI*RGGDVR
Trigger: CCTCACATCCCCACCCCGTCAGATGCTCCCAGAGGA...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR TCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGGACACAAGGGGGCCTaGGCCGGGTGTGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPGHKGA*AGCALK
Trigger: CTTCAGAGCACACCCGGCTCAGGCCCCCTTGTGTCC...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR GCA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATGCAGGGGCTTCCTGCTaGTCCGACAGGGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYAGASC*SDRVSL
Trigger: CAAGCTGACCCTGTCGGAGCAGCAGGAAGCCCCTGC...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGGGCCTGGGCCGGAGCTaGGGGCACGAGGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLGLGRS*GHEALW
Trigger: CCACAAGGCCTCGTGCCCGCAGCTCCGGCCCAGGCC...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGGTGCTTGAAGTCCACTaGACTGGCAAGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGVLEVH*TGKAWA
Trigger: GGCCCAGGCCTTGCCAGTGCAGTGGACTTCAAGCAC...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAATCTGCCAGCGGCAGGTaGAGAGGTGGCTGTCGTTTG +
Preference number: 4 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQSASGR*RGGCRL
Trigger: CAAACGACAGCCACCTCTGCACCTGCCGCTGGCAGA...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGCACAGTAACTGGTGTTaGCCCGGCCAAGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGHSNWC*PGQGEA
Trigger: TGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTG...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCACCCAGGATAGGGGCTaGCCCCCACAAACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSTQDRG*PPQTVP
Trigger: AGGCACTGTTTGTGGGGGGCAGCCCCTATCCTGGGT...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGGATCAGTGGGTGGGATaGTGTGTACGGCCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRDQWVG*CVRPWP
Trigger: CGGCCAGGGCCGTACACAGCATCCCACCCACTGATC...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR GCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGCAGCCCCTCACTGCCTaGAGAGCAGCCCTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGQPLTA*RAALCN
Trigger: ATTGCACAGGGCTGCTCTGCAGGCAGTGAGGGGCTG...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR GCA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAGTACCCTGGCCTCGCTaGTCCAGGCCACACCTTCCG +
Preference number: 4 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVVPWPR*SRPHLP
Trigger: CGGAAGGTGTGGCCTGGAGCAGCGAGGCCAGGGTAC...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGGTGGCCGCGCTCCTTaGCGTCCGACTTTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPGGRAP*RPTFSG
Trigger: CCCGGAAAAAGTCGGACGCCAAGGAGCGCGGCCACC...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342784.7
CDS-3UTR CCA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCTTATGGAGAGGCGCCTaGCGGGGCCCGGGGACTTGG +
Preference number: 4 (lower is better)
Translates to: KYRALETGNESQPYTRLVLWRGA*RGPGTW
Trigger: CCAAGTCCCCGGGCCCCGCCAGGCGCCTCTCCATAA...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCCTGTTCGGGCCCTaGCCTCCCCATCCACTTGCA +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPALFGP*PPHPLA
Trigger: TGCAAGTGGATGGGGAGGCCAGGGCCCGAACAGGGC...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGTCCAGGTGGAAGGTGTaGTCCAGCCGCAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGSRWKV*SSRRKS
Trigger: GGACTTCCTGCGGCTGGACCACACCTTCCACCTGGA...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGCCTCCAGCTCCAGGTaGAAGGTGTGGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: EGRLEVTHHTRVMLTVTGASSSR*KVWSSR
Trigger: GCGGCTGGACCACACCTTCCACCTGGAGCTGGAGGC...ACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAACCGACAGGGTCAGCTTaGCATACAGCAGCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQPTGSA*HTAAPE
Trigger: CTCAGGGGCTGCTGTATGCCAAGCTGACCCTGTCGG...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACACCGCTCCACCAGCAGTaGCAGGGGCAGCCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTPLHQQ*QGQPKD
Trigger: GTCTTTGGGCTGCCCCTGCCACTGCTGGTGGAGCGG...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACAGGGCTGGGTGATGAGTaGGGTGGGCAACTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTGLGDE*GGQLSK
Trigger: CTTCGAGAGTTGCCCACCCCACTCATCACCCAGCCC...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGGGGCTGGGTGATGAGTaGGGTGGGCAACTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGGLGDE*GGQLSK
Trigger: CTTCGAGAGTTGCCCACCCCACTCATCACCCAGCCC...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGGGGGGTCCCGGGCCATaGCCTCCAGTACCACCTTAT +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRGGPGP*PPVPPY
Trigger: ATAAGGTGGTACTGGAGGCCATGGCCCGGGACCCCC...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGGTAAGGCGCGACATCTaGAGATTGTCGGGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGVRRDI*RLSGQA
Trigger: CGCCTGCCCCGACAATCTCCAGATGTCGCGCCTTAC...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGACACGTGGTCGTAGTCTaGCCCGGACAGGAAATCCCG +
Preference number: 4 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARHVVVV*PGQEIP
Trigger: CGGGATTTCCTGTCCGGGCCAGACTACGACCACGTG...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGCTGAGGCACCATTATTaGGGATTTCAGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGHQGTALATGRPVLTNRLRHHY*GFQGGW
Trigger: CCAGCCACCCTGAAATCCCCAATAATGGTGCCTCAG...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACCAGGCCCGCGCTCCTTaGCGTCCGACTTTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNQARAP*RPTFSG
Trigger: CCCGGAAAAAGTCGGACGCCAAGGAGCGCGGGCCTG...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600440.5
CDS-3UTR CCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACCTGGGCTGGGTGGCCTaGCAGAGAGCAAGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNLGWVA*QRARGV
Trigger: CACTCCCCTTGCTCTCTGCCAGGCCACCCAGCCCAG...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCTCTGGGCGCTGGGCTaGGTGGCCTGGCAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKILWALG*VAWQRA
Trigger: TGCTCTCTGCCAGGCCACCCAGCCCAGCGCCCAGAG...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACAGGCTGGTGTTCCCCTaGCGGGGAGGAGGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNRLVFP*RGGGCE
Trigger: CTCACACCCTCCTCCCCGCCAGGGGAACACCAGCCT...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACAGGGGCTGCACCTGTGTaGAGAGCAGACTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTGAAPV*RADFRV
Trigger: GACCCTGAAGTCTGCTCTCCACACAGGTGCAGCCCC...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR TCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGGTGAGTCCCCGTCGCTaGGGTAACCGGCCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PQTVPHASLCVVQGREKQVSPRR*GNRPSG
Trigger: GCCCGAGGGCCGGTTACCTCAGCGACGGGGACTCAC...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGATTCAGGTGCGGGTTaGAGGGCGCATCGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQDSGAG*RAHRSR
Trigger: ACGACTTCGATGCGCCCTTCAACCCGCACCTGAATC...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGCTCCTCTGTGGTCCCTaGAAGAGCCCCACACGCCTG +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPLLCGP*KSPTRL
Trigger: CAGGCGTGTGGGGCTCTTTCAGGGACCACAGAGGAG...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGAGCAGCCCTGTGCAATTaGTCAGTGGGTGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARAALCN*SVGGML
Trigger: CAGCATCCCACCCACTGATCAATTGCACAGGGCTGC...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR GCA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGCGGCGGGCTCCCCAGTaGCAGGTACCCCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLRRAPQ*QVPQAL
Trigger: TAGGGCCTGGGGTACCTGGCACTGGGGAGCCCGCCG...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600252.5
CDS-3UTR GCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACGCAGGGGCTTCCTGCTaGTCCGACAGGGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNAGASC*SDRVSL
Trigger: CAAGCTGACCCTGTCGGAGCAGCAGGAAGCCCCTGC...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGCCTCGGCGCTCGATCTaGCCAACGCACTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRPRRSI*PTHFWM
Trigger: CATCCAGAAGTGCGTTGGGCAGATCGAGCGCCGAGG...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGACCCAGGATAGGGGCTaGCCCCCACAAACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRTQDRG*PPQTVP
Trigger: AGGCACTGTTTGTGGGGGGCAGCCCCTATCCTGGGT...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATACCCAGGATAGGGGCTaGCCCCCACAAACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYTQDRG*PPQTVP
Trigger: AGGCACTGTTTGTGGGGGGCAGCCCCTATCCTGGGT...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGTGTTCCGTACCAGACTaGCCCCAGCCTGACGCTTCA +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGCSVPD*PQPDAS
Trigger: TGAAGCGTCAGGCTGGGGGCAGTCTGGTACGGAACA...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGCTTCTTCATCTTTATaGAGAGGCGCCTGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQASSSL*RGAWRG
Trigger: GCCCCGCCAGGCGCCTCTCCATAAAGATGAAGAAGC...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGTCCAGGTGGAAGGTGTaGTCCAGCCGCAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRSRWKV*SSRRKS
Trigger: GGACTTCCTGCGGCTGGACCACACCTTCCACCTGGA...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCGCTCCACCAGCAGTaGCAGGGGCAGCCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKIPLHQQ*QGQPKD
Trigger: GTCTTTGGGCTGCCCCTGCCACTGCTGGTGGAGCGG...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGGGTGCCCTCAGTGGTaGGGGGAACTCTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPGCPQW*GELCLG
Trigger: CCCCAAACAGAGTTCCCCCCACCACTGAGGGCACCC...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCGGCCCTTTCCACATCTaGCAGGCAGCTGAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPGPFHI*QAAEEP
Trigger: GGGCTCCTCAGCTGCCTGCCAGATGTGGAAAGGGCC...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGGGCCTTGTGGGCGCCTaGCGTGCCGGCAGCAGCACA +
Preference number: 4 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLGLVGA*RAGSST
Trigger: TGTGCTGCTGCCGGCACGCCAGGCGCCCACAAGGCC...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGGTCTGGCTCTCCTTaGTCACCAGGGCACCGCCTT +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRRSGSP*SPGHRL
Trigger: AAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCCCTGAGCAACAGGTCTaGCTCTCCTTGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSPEQQV*LSLVTR
Trigger: CCTGGTGACCAAGGAGAGCCAGACCTGTTGCTCAGG...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTCCCGTGGTAACTCGCTaGCAACCAGGAGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: EGRLEVTHHTRVMLTVTGPVVTR*QPGARP
Trigger: AGGCCGAGCTCCTGGTTGCCAGCGAGTTACCACGGG...ACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTACCCGTGGTAACTCGCTaGCAACCAGGAGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVPVVTR*QPGARP
Trigger: AGGCCGAGCTCCTGGTTGCCAGCGAGTTACCACGGG...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCAGCCATACACGCGACTaGTCCCGTGGTAACTCGCTG +
Preference number: 4 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSSHTRD*SRGNSL
Trigger: CAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCT...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACAAGCCATACACGCGACTaGTCCCGTGGTAACTCGCTG +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTSHTRD*SRGNSL
Trigger: CAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCT...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AGGTCTGGCTCTCCTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTTCCTGCTGTTTTGTTTaGAATAGGCAGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: RSGSPWSPGHRLSHWAPGSCCFV*NRQPQA
Trigger: AGCCTGTGGCTGCCTATTCCAAACAAAACAGCAGGA...ACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR TCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGGGAGAAGGTTTTCCTaGGTAGCGGCTCGGCCATGC +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPGRRFS*VAARPC
Trigger: GCATGGCCGAGCCGCTACTCAGGAAAACCTTCTCCC...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS-3UTR TCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGCATCTGGCAGGCAGCTaGGGAGCCCTCGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PQTVPHASLCVVQGREKQHLAGS*GALGCP
Trigger: AGGGCACCCGAGGGCTCCTCAGCTGCCTGCCAGATG...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACCTCGATGTGGTGCTTaGAGTCCACTGCACTGGCAA +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTPRCGA*SPLHWQ
Trigger: TTGCCAGTGCAGTGGACTTCAAGCACCACATCGAGG...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATGATTCAGGTGCGGGTTaGAGGGCGCATCGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYDSGAG*RAHRSR
Trigger: ACGACTTCGATGCGCCCTTCAACCCGCACCTGAATC...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGACCTGGAAACTGGGAATaGGTCTCAGCCATACACGCG +
Preference number: 4 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARPGNWE*VSAIHA
Trigger: CGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGG...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACAAACTCTGGGGCCCACTaGGGCACCATTATTGGGGAT +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTNSGAH*GTIIGD
Trigger: ATCCCCAATAATGGTGCCTCAGTGGGCCCCAGAGTT...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACACCTCGGCGCTCGATCTaGCCAACGCACTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTPRRSI*PTHFWM
Trigger: CATCCAGAAGTGCGTTGGGCAGATCGAGCGCCGAGG...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTGCTTGAAGTCCACTaGACTGGCAAGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: EGRLEVTHHTRVMLTVTGVLEVH*TGKAWA
Trigger: GGCCCAGGCCTTGCCAGTGCAGTGGACTTCAAGCAC...ACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTCTGCCAGCGGCAGGTaGAGAGGTGGCTGTCGTTTG +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNSASGR*RGGCRL
Trigger: CAAACGACAGCCACCTCTGCACCTGCCGCTGGCAGA...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATTGTTCCGTACCAGACTaGCCCCAGCCTGACGCTTCA +
Preference number: 4 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYCSVPD*PQPDAS
Trigger: TGAAGCGTCAGGCTGGGGGCAGTCTGGTACGGAACA...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACAAGAGCCCCACACGCCTaGTTCAGACGTGTCCACGCA +
Preference number: 4 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTRAPHA*FRRVHA
Trigger: TGCGTGGACACGTCTGAAGCAGGCGTGTGGGGCTCT...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAAGAGCCCCACACGCCTaGTTCAGACGTGTCCACGCA +
Preference number: 4 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVRAPHA*FRRVHA
Trigger: TGCGTGGACACGTCTGAAGCAGGCGTGTGGGGCTCT...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGGGGGCTGGCGGGGGCTaGACCTGTGTGGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PQTVPHASLCVVQGREKQGAGGG*TCVESR
Trigger: TCTGCTCTCCACACAGGTGCAGCCCCCGCCAGCCCC...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCATCGGCGGCTACTaGGCTCCAGGCTTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKIPIGGY*APGFAG
Trigger: ACCTGCAAAGCCTGGAGCCCAGTAGCCGCCGATGGG...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600252.5
CDS-3UTR CCA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCGGTCTTCCTCAGGGATaGGGTTGTACCAGATCTCGC +
Preference number: 4 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSGLPQG*GCTRSR
Trigger: GCGAGATCTGGTACAACCCCATCCCTGAGGAAGACC...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGAGGGCCGGAAGGAGGTaGGTGATGGGGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PQTVPHASLCVVQGREKQRAGRR*VMGAQL
Trigger: CAGCTGGGCCCCCATCACCCACCTCCTTCCGGCCCT...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGAGCAGCACGGTGCCCTaGGCACAGGGCCGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: PQTVPHASLCVVQGREKQSSTVP*AQGRCL
Trigger: AAGGCACCGGCCCTGTGCCCAGGGCACCGTGCTGCT...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACCCGACAGGGTCAGCTTaGCATACAGCAGCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNPTGSA*HTAAPE
Trigger: CTCAGGGGCTGCTGTATGCCAAGCTGACCCTGTCGG...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCGGGTGCCCTCAGTGGTaGGGGGAACTCTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: KYRALETGNESQPYTRLVGCPQW*GELCLG
Trigger: CCCCAAACAGAGTTCCCCCCACCACTGAGGGCACCC...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACGTAAGGCGCGACATCTaGAGATTGTCGGGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNVRRDI*RLSGQA
Trigger: CGCCTGCCCCGACAATCTCCAGATGTCGCGCCTTAC...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACCACGTGGTCGTAGTCTaGCCCGGACAGGAAATCCCG +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNHVVVV*PGQEIP
Trigger: CGGGATTTCCTGTCCGGGCCAGACTACGACCACGTG...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGCACGTGGTCGTAGTCTaGCCCGGACAGGAAATCCCG +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPHVVVV*PGQEIP
Trigger: CGGGATTTCCTGTCCGGGCCAGACTACGACCACGTG...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACAGGTCTGGCTCTCCTTaGTCACCAGGGCACCGCCTT +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNRSGSP*SPGHRL
Trigger: AAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGGATGGTCACAACCGCTaGTCCCTAAAATCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGDGHNR*SLKSPG
Trigger: GCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATC...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGAGATGGTCACAACCGCTaGTCCCTAAAATCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARDGHNR*SLKSPG
Trigger: GCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATC...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACAGGTGCTCAGGAAAGATaGTCACAACCGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTGAQER*SQPLVP
Trigger: AGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACC...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGTGCTGTGTACGGCCCTaGCCGGCCCCTGATAAGTCA +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPCCVRP*PAPDKS
Trigger: TGACTTATCAGGGGCCGGCCAGGGCCGTACACAGCA...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR TCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGTTTCTTCACTGCCGCTaGGCCACAAAGACGGTACAG +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGFLHCR*ATKTVQ
Trigger: CTGTACCGTCTTTGTGGCTCAGCGGCAGTGAAGAAA...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGACTCAGAGGCACACGTTaGTTTGCTTGGAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARLRGTR*FAWRAL
Trigger: GAGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAG...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCGTGCTTGAAGTCCACTaGACTGGCAAGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKIVLEVH*TGKAWA
Trigger: GGCCCAGGCCTTGCCAGTGCAGTGGACTTCAAGCAC...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCTCTGCCAGCGGCAGGTaGAGAGGTGGCTGTCGTTTG +
Preference number: 4 (lower is better)
Translates to: KYRALETGNESQPYTRLVSASGR*RGGCRL
Trigger: CAAACGACAGCCACCTCTGCACCTGCCGCTGGCAGA...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGCACCACTTCGGGGTCTaGCAGCGGCAGGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLHHFGV*QRQVQR
Trigger: CCTCTGCACCTGCCGCTGGCAGACCCCGAAGTGGTG...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCCGTCCTCGCTGTCACTaGCCGTCACGTGGTCGTAGT +
Preference number: 4 (lower is better)
Translates to: KYRALETGNESQPYTRLVRPRCH*PSRGRS
Trigger: ACTACGACCACGTGACGGGCAGTGACAGCGAGGACG...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCTCTTTGAGATTCAGGTaGGGGTTGAAGGGCGCATCG +
Preference number: 4 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSSLRFR*GLKGAS
Trigger: CGATGCGCCCTTCAACCCGCACCTGAATCTCAAAGA...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGTCTTTGAGATTCAGGTaGGGGTTGAAGGGCGCATCG +
Preference number: 4 (lower is better)
Translates to: PRPQTWQLVSKYRALETGSLRFR*GLKGAS
Trigger: CGATGCGCCCTTCAACCCGCACCTGAATCTCAAAGA...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCACAGTAACTGGTGTTaGCCCGGCCAAGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKIHSNWC*PGQGEA
Trigger: TGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTG...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCTGTTCCGTACCAGACTaGCCCCAGCCTGACGCTTCA +
Preference number: 4 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPCSVPD*PQPDAS
Trigger: TGAAGCGTCAGGCTGGGGGCAGTCTGGTACGGAACA...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGCGGGGGCTCAGGTGCTaGAGGTCTGGGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PQTVPHASLCVVQGREKQRGLRC*RSGVFL
Trigger: GAGGAAGACCCCAGACCTCCAGCACCTGAGCCCCCG...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGCTTCTTCATCTTTATaGAGAGGCGCCTGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: EGRLEVTHHTRVMLTVTGASSSL*RGAWRG
Trigger: GCCCCGCCAGGCGCCTCTCCATAAAGATGAAGAAGC...ACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGGCCAGCTGTTGGGCCTaGCACCCTCGGAAGACCGTG +
Preference number: 4 (lower is better)
Translates to: PQTVPHASLCVVQGREKQASCWA*HPRKTV
Trigger: CACGGTCTTCCGAGGGTGCCAGGCCCAACAGCTGGC...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS-3UTR CCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCGACAGGGTCAGCTTaGCATACAGCAGCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKIPTGSA*HTAAPE
Trigger: CTCAGGGGCTGCTGTATGCCAAGCTGACCCTGTCGG...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTTGCCCAACGCACTTCTaGATGATGAGGGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: EGRLEVTHHTRVMLTVTGCPTHF*MMRGTW
Trigger: CCAGGTGCCCCTCATCATCCAGAAGTGCGTTGGGCA...ACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGACCTTATACAGGGGCTaGGTGATGAGTGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPTLYRG*VMSGVG
Trigger: GCCCACCCCACTCATCACCCAGCCCCTGTATAAGGT...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCACCTTATACAGGGGCTaGGTGATGAGTGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPTLYRG*VMSGVG
Trigger: GCCCACCCCACTCATCACCCAGCCCCTGTATAAGGT...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCCACGGCCAAGTTCTGTaGGGTCATGCGGTTGTAGGC +
Preference number: 4 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPHGQVL*GHAVVG
Trigger: GCCTACAACCGCATGACCCCACAGAACTTGGCCGTG...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCGTAAGGCGCGACATCTaGAGATTGTCGGGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: KYRALETGNESQPYTRLVVRRDI*RLSGQA
Trigger: CGCCTGCCCCGACAATCTCCAGATGTCGCGCCTTAC...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAGAGGTGGCTGTCGTTTaGGTCGCAAGTAAGGCGCGA +
Preference number: 4 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVEVAVV*VASKAR
Trigger: TCGCGCCTTACTTGCGACCCAAACGACAGCCACCTC...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGATGCTCACAGTAACTaGTGTTGCCCCGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: EGRLEVTHHTRVMLTVTGDAHSN*CCPGQG
Trigger: CCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATC...ACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATACTAGAGGCCAATCGTaGGGACTTCCCCGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYTRGQS*GLPRKR
Trigger: CCTTTTCCGGGGAAGTCCCCACGATTGGCCTCTAGT...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAGAAGGGATGTGGAGCTaGTGCTCACCTTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVEGMWS*CSPWGR
Trigger: CCTTCCCCAAGGTGAGCACCAGCTCCACATCCCTTC...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR TCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGCCTCGATGTGGTGCTTaGAGTCCACTGCACTGGCAA +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPPRCGA*SPLHWQ
Trigger: TTGCCAGTGCAGTGGACTTCAAGCACCACATCGAGG...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGACCAGGAGCTCGGCCTaGGCAACAGGTCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PQTVPHASLCVVQGREKQTRSSA*ATGLAL
Trigger: GAGAGCCAGACCTGTTGCTCAGGCCGAGCTCCTGGT...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGAGTTATCTCCATTTGCTaGCTAGAGGCCAATCGTGGG +
Preference number: 4 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARVISIC*LEANRG
Trigger: CCCACGATTGGCCTCTAGTCAGCAAATGGAGATAAC...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATAGTTCTGTGGGGTCATaGGGTTGTAGGCATGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYSSVGS*GCRHGR
Trigger: CCTTCCATGCCTACAACCGCATGACCCCACAGAACT...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCACCTCGATGTGGTaGTTGAAGTCCACTGCACTG +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRSTSMW*LKSTAL
Trigger: CAGTGCAGTGGACTTCAAGCACCACATCGAGGTGCT...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCGGCCTGAGCCGGGTGTaGTCTGAAGCTTCATGTACC +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKIGLSRV*SEASCT
Trigger: GGTACATGAAGCTTCAGAGCACACCCGGCTCAGGCC...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGGTCTTCCTCAGGGATaGGGTTGTACCAGATCTCGC +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPGLPQG*GCTRSR
Trigger: GCGAGATCTGGTACAACCCCATCCCTGAGGAAGACC...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTAGCAGCACGGTGCCCTaGGCACAGGGCCGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: VFVSSKGGRNSAVLKANTSSTVP*AQGRCL
Trigger: AAGGCACCGGCCCTGTGCCCAGGGCACCGTGCTGCT...AGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGGGGGGTCCCGGGCCATaGCCTCCAGTACCACCTTAT +
Preference number: 4 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLGGPGP*PPVPPY
Trigger: ATAAGGTGGTACTGGAGGCCATGGCCCGGGACCCCC...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGTGCAGCACCTCGATGTaGTGCTTGAAGTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRCSTSM*CLKSTA
Trigger: TGCAGTGGACTTCAAGCACCACATCGAGGTGCTGCA...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGGGGCAGGCGGGGATCTaGCCAAGACTGCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLGQAGI*PRLQQV
Trigger: TACCTGCTGCAGTCTTGGCCAGATCCCCGCCTGCCC...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCCCTGAGCAACAGGTCTaGCTCTCCTTGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: KYRALETGNESQPYTRLVPEQQV*LSLVTR
Trigger: CCTGGTGACCAAGGAGAGCCAGACCTGTTGCTCAGG...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGCCCGTGGTAACTCGCTaGCAACCAGGAGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: PQTVPHASLCVVQGREKQPVVTR*QPGARP
Trigger: AGGCCGAGCTCCTGGTTGCCAGCGAGTTACCACGGG...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATCCAAATACCGGGCCCTaGAAACTGGGAATGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYPNTGP*KLGMSL
Trigger: GAGACTCATTCCCAGTTTCCAGGGCCCGGTATTTGG...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGGTGCTCAGGAAAGATaGTCACAACCGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPGAQER*SQPLVP
Trigger: AGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACC...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACAGGTGCTCAGGAAAGATaGTCACAACCGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTGAQER*SQPLVP
Trigger: AGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACC...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACAAAAAGGGGAAGCCCTTaGTGCTCAGGAAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTKRGSP*CSGKMV
Trigger: GACCATCTTTCCTGAGCACCAAGGGCTTCCCCTTTT...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTAGAGGCCAATCGTaGGGACTTCCCCGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVTRGQS*GLPRKR
Trigger: CCTTTTCCGGGGAAGTCCCCACGATTGGCCTCTAGT...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACAACTAGAGGCCAATCGTaGGGACTTCCCCGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTTRGQS*GLPRKR
Trigger: CCTTTTCCGGGGAAGTCCCCACGATTGGCCTCTAGT...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCAGCTGGTGCTCACCTTaGGGAAGGGGATGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKISWCSP*GRGWEA
Trigger: AGCTTCCCATCCCCTTCCCCAAGGTGAGCACCAGCT...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGAGCCCCTGATAAGTCATaGTTCCTTGGATCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARAPDKS*FLGSCC
Trigger: ACAGCAGGATCCAAGGAACCATGACTTATCAGGGGC...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR TCA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCTTTCTTCACTGCCGCTaGGCCACAAAGACGGTACAG +
Preference number: 4 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPFLHCR*ATKTVQ
Trigger: CTGTACCGTCTTTGTGGCTCAGCGGCAGTGAAGAAA...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp GAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTTTTCTTCACTGCCGCTaGGCCACAAAGACGGTACAG +
Preference number: 4 (lower is better)
Translates to: EGRLEVTHHTRVMLTVTGFLHCR*ATKTVQ
Trigger: CTGTACCGTCTTTGTGGCTCAGCGGCAGTGAAGAAA...ACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCCCTCGATGTGGTGCTTaGAGTCCACTGCACTGGCAA +
Preference number: 4 (lower is better)
Translates to: KYRALETGNESQPYTRLVPRCGA*SPLHWQ
Trigger: TTGCCAGTGCAGTGGACTTCAAGCACCACATCGAGG...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCAACTCTGGGGCCCACTaGGGCACCATTATTGGGGAT +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKINSGAH*GTIIGD
Trigger: ATCCCCAATAATGGTGCCTCAGTGGGCCCCAGAGTT...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACAGTTCTGTGGGGTCATaGGGTTGTAGGCATGGAAGG +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNSSVGS*GCRHGR
Trigger: CCTTCCATGCCTACAACCGCATGACCCCACAGAACT...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTAGTTCTGTGGGGTCATaGGGTTGTAGGCATGGAAGG +
Preference number: 4 (lower is better)
Translates to: EGRLEVTHHTRVMLTVTGSSVGS*GCRHGR
Trigger: CCTTCCATGCCTACAACCGCATGACCCCACAGAACT...ACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACAAGCACCTCGATGTGGTaGTTGAAGTCCACTGCACTG +
Preference number: 4 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTSTSMW*LKSTAL
Trigger: CAGTGCAGTGGACTTCAAGCACCACATCGAGGTGCT...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCTCTTTGAGATTCAGGTaGGGGTTGAAGGGCGCATCG +
Preference number: 4 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPSLRFR*GLKGAS
Trigger: CGATGCGCCCTTCAACCCGCACCTGAATCTCAAAGA...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGGCACACGTTGATTTaGTTGGAGAGCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRRHTLI*LESSLS
Trigger: GGAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCT...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTAGGGGAAGCCCTTGGTaGTCAGGAAAGATGGTCACA +
Preference number: 4 (lower is better)
Translates to: EGRLEVTHHTRVMLTVTGRGSPW*SGKMVT
Trigger: TGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCCT...ACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTGCCCTGTTCGGGCCCTaGCCTCCCCATCCACTTGCA +
Preference number: 4 (lower is better)
Translates to: VFVSSKGGRNSAVLKANTALFGP*PPHPLA
Trigger: TGCAAGTGGATGGGGAGGCCAGGGCCCGAACAGGGC...AGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTGCCTCCAGCTCCAGGTaGAAGGTGTGGTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VFVSSKGGRNSAVLKANTASSSR*KVWSSR
Trigger: GCGGCTGGACCACACCTTCCACCTGGAGCTGGAGGC...AGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACATGCAGCACCTCGATGTaGTGCTTGAAGTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTCSTSM*CLKSTA
Trigger: TGCAGTGGACTTCAAGCACCACATCGAGGTGCTGCA...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGCGGCAGGTGCAGAGGTaGCTGTCGTTTGGGTCGCAA +
Preference number: 4 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLRQVQR*LSFGSQ
Trigger: TTGCGACCCAAACGACAGCCACCTCTGCACCTGCCG...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCCCCAGGCCCCAGACTTaGCAACTAGTGTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPPRPQT*QLVSKY
Trigger: GTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAAAAGGGGAAGCCCTTaGTGCTCAGGAAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRKRGSP*CSGKMV
Trigger: GACCATCTTTCCTGAGCACCAAGGGCTTCCCCTTTT...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCCAAGGAGATGGGGATTaGAAAGGCCAGACTCTGTTA +
Preference number: 4 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSQGDGD*KGQTLL
Trigger: TAACAGAGTCTGGCCTTTCCAATCCCCATCTCCTTG...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGCCTTGGGGAAGGGGATaGGAAGCTTGTTCTTACCTT +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRPWGRG*EACSYL
Trigger: AAGGTAAGAACAAGCTTCCCATCCCCTTCCCCAAGG...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGGAGCATCTGACGGGGTaGGGATGTGAGGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PQTVPHASLCVVQGREKQEHLTG*GCEAGA
Trigger: AGCACCAGCCTCACATCCCCACCCCGTCAGATGCTC...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR TCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCTCAGAGGCACACGTTaGTTTGCTTGGAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKILRGTR*FAWRAL
Trigger: GAGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAG...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR TCA 90 bp GAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTATCTCCATTTGCTaGCTAGAGGCCAATCGTGGG +
Preference number: 4 (lower is better)
Translates to: EGRLEVTHHTRVMLTVTGVISIC*LEANRG
Trigger: CCCACGATTGGCCTCTAGTCAGCAAATGGAGATAAC...ACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTGCAGGGGCTTCCTGCTaGTCCGACAGGGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VFVSSKGGRNSAVLKANTAGASC*SDRVSL
Trigger: CAAGCTGACCCTGTCGGAGCAGCAGGAAGCCCCTGC...AGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCAGCACCTCGATGTGGTaGTTGAAGTCCACTGCACTG +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKISTSMW*LKSTAL
Trigger: CAGTGCAGTGGACTTCAAGCACCACATCGAGGTGCT...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAAGGCACACGTTGATTTaGTTGGAGAGCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVRHTLI*LESSLS
Trigger: GGAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCT...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCAGGCACACGTTGATTTaGTTGGAGAGCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPRHTLI*LESSLS
Trigger: GGAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCT...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGTGCCCAACGCACTTCTaGATGATGAGGGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLCPTHF*MMRGTW
Trigger: CCAGGTGCCCCTCATCATCCAGAAGTGCGTTGGGCA...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGCACGGCCAAGTTCTGTaGGGTCATGCGGTTGTAGGC +
Preference number: 4 (lower is better)
Translates to: PQTVPHASLCVVQGREKQHGQVL*GHAVVG
Trigger: GCCTACAACCGCATGACCCCACAGAACTTGGCCGTG...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCTGCAGCACCTCGATGTaGTGCTTGAAGTCCACTGCA +
Preference number: 4 (lower is better)
Translates to: KYRALETGNESQPYTRLVCSTSM*CLKSTA
Trigger: TGCAGTGGACTTCAAGCACCACATCGAGGTGCTGCA...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTGGGCAGGCGGGGATCTaGCCAAGACTGCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: VFVSSKGGRNSAVLKANTGQAGI*PRLQQV
Trigger: TACCTGCTGCAGTCTTGGCCAGATCCCCGCCTGCCC...AGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGGAGGTGGCTGTCGTTTaGGTCGCAAGTAAGGCGCGA +
Preference number: 4 (lower is better)
Translates to: PQTVPHASLCVVQGREKQEVAVV*VASKAR
Trigger: TCGCGCCTTACTTGCGACCCAAACGACAGCCACCTC...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGCAAGGAGATGGGGATTaGAAAGGCCAGACTCTGTTA +
Preference number: 4 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRQGDGD*KGQTLL
Trigger: TAACAGAGTCTGGCCTTTCCAATCCCCATCTCCTTG...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCTGAGGCACCATTATTaGGGATTTCAGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKILRHHY*GFQGGW
Trigger: CCAGCCACCCTGAAATCCCCAATAATGGTGCCTCAG...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTGGGCTGGGTGATGAGTaGGGTGGGCAACTCTCGAAG +
Preference number: 4 (lower is better)
Translates to: VFVSSKGGRNSAVLKANTGLGDE*GGQLSK
Trigger: CTTCGAGAGTTGCCCACCCCACTCATCACCCAGCCC...AGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTCGGCAGGTGCAGAGGTaGCTGTCGTTTGGGTCGCAA +
Preference number: 4 (lower is better)
Translates to: VFVSSKGGRNSAVLKANTRQVQR*LSFGSQ
Trigger: TTGCGACCCAAACGACAGCCACCTCTGCACCTGCCG...AGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGGATGGGCAGCAGCACGGTaGCCTGGGCACAGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LCIFIYYPQRWRCGKEEGWAAAR*PGHRAG
Trigger: ACCGGCCCTGTGCCCAGGGCACCGTGCTGCTGCCCA...TCCCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGAAGACACACACACACATaGATGGAGGCAATAAATATG +
Preference number: 4 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARRHTHT*MEAINM
Trigger: CATATTTATTGCCTCCATGCATGTGTGTGTGTGTCT...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTTGCCCAACGCACTTCTaGATGATGAGGGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: VFVSSKGGRNSAVLKANTCPTHF*MMRGTW
Trigger: CCAGGTGCCCCTCATCATCCAGAAGTGCGTTGGGCA...AGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTACCTTATACAGGGGCTaGGTGATGAGTGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VFVSSKGGRNSAVLKANTTLYRG*VMSGVG
Trigger: GCCCACCCCACTCATCACCCAGCCCCTGTATAAGGT...AGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGCCAAATACCGGGCCCTaGAAACTGGGAATGAGTCTC +
Preference number: 4 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLPNTGP*KLGMSL
Trigger: GAGACTCATTCCCAGTTTCCAGGGCCCGGTATTTGG...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGAAGCTAATACTGATTTaGTTGGCAGCAGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPKLILI*LAAARG
Trigger: CCCTCTTGCTGCTGCCAACCAAATCAGTATTAGCTT...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACAAAGCTAATACTGATTTaGTTGGCAGCAGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTKLILI*LAAARG
Trigger: CCCTCTTGCTGCTGCCAACCAAATCAGTATTAGCTT...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGCTGAGGCACCATTATTaGGGATTTCAGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PQTVPHASLCVVQGREKQLRHHY*GFQGGW
Trigger: CCAGCCACCCTGAAATCCCCAATAATGGTGCCTCAG...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCTATTATCCACAAAGATaGAGGTGCGGAAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSYYPQR*RCGKEE
Trigger: CTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATA...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGCAATTGATCAGTGGGTaGGATGCTGTGTACGGCCCT +
Preference number: 4 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLQLISG*DAVYGP
Trigger: AGGGCCGTACACAGCATCCCACCCACTGATCAATTG...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR GCA 90 bp ACCTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGTGGGCACAGGGCCGGTaGCTTCTCACGCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TCAYLFIIHKDGGAEKKRWAQGR*LLTPGS
Trigger: GGACCCTGGCGTGAGAAGGCACCGGCCCTGTGCCCA...CCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGTGGTTCCTTGGATCCTaGTGTTTTGTTTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPWFLGS*CFVWNR
Trigger: CCTATTCCAAACAAAACAGCAGGATCCAAGGAACCA...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCAAGCTAATACTGATTTaGTTGGCAGCAGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKIKLILI*LAAARG
Trigger: CCCTCTTGCTGCTGCCAACCAAATCAGTATTAGCTT...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGTGCAATTGATCAGTaGGTGGGATGCTGTGTACGG +
Preference number: 4 (lower is better)
Translates to: PQTVPHASLCVVQGREKQCAIDQ*VGCCVR
Trigger: CCGTACACAGCATCCCACCCACTGATCAATTGCACA...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR GCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGGAGAAACAGTGCAGTaGTCAAAGCTAATACTGATT +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPGETVQ*SKLILI
Trigger: AATCAGTATTAGCTTTGAGCACTGCACTGTTTCTCC...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCGGAGAAACAGTGCAGTaGTCAAAGCTAATACTGATT +
Preference number: 4 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPGETVQ*SKLILI
Trigger: AATCAGTATTAGCTTTGAGCACTGCACTGTTTCTCC...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACGGAGAAACAGTGCAGTaGTCAAAGCTAATACTGATT +
Preference number: 4 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNGETVQ*SKLILI
Trigger: AATCAGTATTAGCTTTGAGCACTGCACTGTTTCTCC...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACAAGACACACACACACATaGATGGAGGCAATAAATATG +
Preference number: 4 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTRHTHT*MEAINM
Trigger: CATATTTATTGCCTCCATGCATGTGTGTGTGTGTCT...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGAGACACACACACACATaGATGGAGGCAATAAATATG +
Preference number: 4 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPRHTHT*MEAINM
Trigger: CATATTTATTGCCTCCATGCATGTGTGTGTGTGTCT...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGGACCGCTCCACCAGCAGTaGCAGGGGCAGCCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LCIFIYYPQRWRCGKEEGPLHQQ*QGQPKD
Trigger: GTCTTTGGGCTGCCCCTGCCACTGCTGGTGGAGCGG...TCCCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTATATTATCCACAAAGATaGAGGTGCGGAAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVYYPQR*RCGKEE
Trigger: CTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATA...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACCTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGGAGACGAGGCGCAGGTaGTCCAGGAGAAGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: TCAYLFIIHKDGGAEKKRETRRR*SRRSVS
Trigger: GCTGACGCTTCTCCTGGACCACCTGCGCCTCGTCTC...CCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGGAGAGACGAGGCGCAGGTaGTCCAGGAGAAGCGTCAGC +
Preference number: 4 (lower is better)
Translates to: LCIFIYYPQRWRCGKEEGETRRR*SRRSVS
Trigger: GCTGACGCTTCTCCTGGACCACCTGCGCCTCGTCTC...TCCCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCTATTATCCACAAAGATaGAGGTGCGGAAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GEALGAQERWSQPLVPKIYYPQR*RCGKEE
Trigger: CTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATA...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR GCA 90 bp CTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGGAAGAGCCCCACACGCCTaGTTCAGACGTGTCCACGCA +
Preference number: 4 (lower is better)
Translates to: LCIFIYYPQRWRCGKEEGRAPHA*FRRVHA
Trigger: TGCGTGGACACGTCTGAAGCAGGCGTGTGGGGCTCT...TCCCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACCTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGCACGGCCAAGTTCTGTaGGGTCATGCGGTTGTAGGC +
Preference number: 4 (lower is better)
Translates to: TCAYLFIIHKDGGAEKKRHGQVL*GHAVVG
Trigger: GCCTACAACCGCATGACCCCACAGAACTTGGCCGTG...CCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACCTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGGGATTTCAGGGTGGCTaGGCACTGCAAACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TCAYLFIIHKDGGAEKKRGFQGG*ALQTAP
Trigger: GGGAGCAGTTTGCAGTGCCCAGCCACCCTGAAATCC...CCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGGAGGATTTCAGGGTGGCTaGGCACTGCAAACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LCIFIYYPQRWRCGKEEGGFQGG*ALQTAP
Trigger: GGGAGCAGTTTGCAGTGCCCAGCCACCCTGAAATCC...TCCCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp ACCTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGGGTCTTCCTCAGGGATaGGGTTGTACCAGATCTCGC +
Preference number: 4 (lower is better)
Translates to: TCAYLFIIHKDGGAEKKRGLPQG*GCTRSR
Trigger: GCGAGATCTGGTACAACCCCATCCCTGAGGAAGACC...CCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGGAGATGGTCACAACCGCTaGTCCCTAAAATCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LCIFIYYPQRWRCGKEEGDGHNR*SLKSPG
Trigger: GCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATC...TCCCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CCA 90 bp CTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGGACAAGGAGATGGGGATTaGAAAGGCCAGACTCTGTTA +
Preference number: 4 (lower is better)
Translates to: LCIFIYYPQRWRCGKEEGQGDGD*KGQTLL
Trigger: TAACAGAGTCTGGCCTTTCCAATCCCCATCTCCTTG...TCCCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CCA 90 bp CGGCCTGGGACCCTTCGGGAGCCTGGGGCTCTGGCTCTGGAGGGCTaGGCTCTGGGCGCTGGGCTGGGTGGCCGCGCTCCTTGGCGTCCG +
Preference number: 5 (lower is better)
Translates to: RPGTLREPGALALEG*ALGAGLGGRAPWRP
Trigger: CGGACGCCAAGGAGCGCGGCCACCCAGCCCAGCGCCCAGAGCCCAGCCCTCCAGAGCCAGAGCCCCAGGCTCCCGAAGGGTCCCAGGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000597977.5
CDS CCA 90 bp GGGCTGGAGGGCCCCTCTGCTCCGGCCTGGGACCCTTCGGGAGCCTaGGGCTCTGGCTCTGGAGGGCTGGGCTCTGGGCGCTGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: GLEGPSAPAWDPSGA*GSGSGGLGSGRWAG
Trigger: CCCAGCCCAGCGCCCAGAGCCCAGCCCTCCAGAGCCAGAGCCCCAGGCTCCCGAAGGGTCCCAGGCCGGAGCAGAGGGGCCCTCCAGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000597977.5
ENST00000600252.5
CDS CCA 90 bp GGGCCCCTCTGCTCCGGCCTGGGACCCTTCGGGAGCCTGGGGCTCTaGCTCTGGAGGGCTGGGCTCTGGGCGCTGGGCTGGGTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GPLCSGLGPFGSLGL*LWRAGLWALGWVAW
Trigger: CCAGGCCACCCAGCCCAGCGCCCAGAGCCCAGCCCTCCAGAGCCAGAGCCCCAGGCTCCCGAAGGGTCCCAGGCCGGAGCAGAGGGGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS CCA 90 bp CTCTGCTCCGGCCTGGGACCCTTCGGGAGCCTGGGGCTCTGGCTCTaGAGGGCTGGGCTCTGGGCGCTGGGCTGGGTGGCCGCGCTCCTT +
Preference number: 5 (lower is better)
Translates to: LCSGLGPFGSLGLWL*RAGLWALGWVAALL
Trigger: AAGGAGCGCGGCCACCCAGCCCAGCGCCCAGAGCCCAGCCCTCCAGAGCCAGAGCCCCAGGCTCCCGAAGGGTCCCAGGCCGGAGCAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000597977.5
CDS CCA 90 bp CTGCACTGGCAAGGCCTGGGCCGGAGCTGCGGGCACGAGGCCTTGTaGGCGCCTGGCGTGCCGGCAGCAGCACAGGCCCGAAGCACACGG +
Preference number: 5 (lower is better)
Translates to: LHWQGLGRSCGHEAL*APGVPAAAQARSTR
Trigger: CCGTGTGCTTCGGGCCTGTGCTGCTGCCGGCACGCCAGGCGCCCACAAGGCCTCGTGCCCGCAGCTCCGGCCCAGGCCTTGCCAGTGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
ENST00000602203.1
CDS CCA 90 bp CGGCCTGGGACCCTTCGGGAGCCTGGGGCTCTGGCTCTGGAGGGCTaGGCTCTGGGCGCTGGGCTGGGTGGCCTGGCAGAGAGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: RPGTLREPGALALEG*ALGAGLGGLAESKG
Trigger: CCCCTTGCTCTCTGCCAGGCCACCCAGCCCAGCGCCCAGAGCCCAGCCCTCCAGAGCCAGAGCCCCAGGCTCCCGAAGGGTCCCAGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS GCA 90 bp CGGAAGACCGTGGGCAGCAGCACGGTGCCCTGGGCACAGGGCCGGTaGCTTCTCACGCCAGGGTCCCACGCAAGCACCAGGGCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: RKTVGSSTVPWAQGR*LLTPGSHASTRARR
Trigger: CCTGCGCGCCCTGGTGCTTGCGTGGGACCCTGGCGTGAGAAGGCACCGGCCCTGTGCCCAGGGCACCGTGCTGCTGCCCACGGTCTTCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CCA 90 bp CTCTGCTCCGGCCTGGGACCCTTCGGGAGCCTGGGGCTCTGGCTCTaGAGGGCTGGGCTCTGGGCGCTGGGCTGGGTGGCCTGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: LCSGLGPFGSLGLWL*RAGLWALGWVAWQR
Trigger: TCTCTGCCAGGCCACCCAGCCCAGCGCCCAGAGCCCAGCCCTCCAGAGCCAGAGCCCCAGGCTCCCGAAGGGTCCCAGGCCGGAGCAGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS GCA 90 bp GCTGTTGGGCCTGGCACCCTCGGAAGACCGTGGGCAGCAGCACGGTaGCCTGGGCACAGGGCCGGTGCCTTCTCACGCCAGGGTCCCACG +
Preference number: 5 (lower is better)
Translates to: AVGPGTLGRPWAAAR*PGHRAGAFSRQGPT
Trigger: CGTGGGACCCTGGCGTGAGAAGGCACCGGCCCTGTGCCCAGGGCACCGTGCTGCTGCCCACGGTCTTCCGAGGGTGCCAGGCCCAACAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS CCA 90 bp TGGGCCTGGCACCCTCGGAAGACCGTGGGCAGCAGCACGGTGCCCTaGGCACAGGGCCGGTGCCTTCTCACGCCAGGGTCCCACGCAAGC +
Preference number: 5 (lower is better)
Translates to: WAWHPRKTVGSSTVP*AQGRCLLTPGSHAS
Trigger: GCTTGCGTGGGACCCTGGCGTGAGAAGGCACCGGCCCTGTGCCCAGGGCACCGTGCTGCTGCCCACGGTCTTCCGAGGGTGCCAGGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS CCA 90 bp GGACCCTTCGGGAGCCTGGGGCTCTGGCTCTGGAGGGCTGGGCTCTaGGCGCTGGGCTGGGTGGCCGCGCTCCTTGGCGTCCGACTTTTT +
Preference number: 5 (lower is better)
Translates to: GPFGSLGLWLWRAGL*ALGWVAALLGVRLF
Trigger: AAAAAGTCGGACGCCAAGGAGCGCGGCCACCCAGCCCAGCGCCCAGAGCCCAGCCCTCCAGAGCCAGAGCCCCAGGCTCCCGAAGGGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000597977.5
CDS CCA 90 bp GGACCCTTCGGGAGCCTGGGGCTCTGGCTCTGGAGGGCTGGGCTCTaGGCGCTGGGCTGGGTGGCCTGGCAGAGAGCAAGGGGAGTGAGA +
Preference number: 5 (lower is better)
Translates to: GPFGSLGLWLWRAGL*ALGWVAWQRARGVR
Trigger: TCTCACTCCCCTTGCTCTCTGCCAGGCCACCCAGCCCAGCGCCCAGAGCCCAGCCCTCCAGAGCCAGAGCCCCAGGCTCCCGAAGGGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS GCA 90 bp TGCAGCCGCATGTCCTACCTCGGAAGACCGTGGGCAGCAGCACGGTaGCCTGGGCACAGGGCCGGTGCCTTCTCACGCCAGGGTCCCACG +
Preference number: 5 (lower is better)
Translates to: CSRMSYLGRPWAAAR*PGHRAGAFSRQGPT
Trigger: CGTGGGACCCTGGCGTGAGAAGGCACCGGCCCTGTGCCCAGGGCACCGTGCTGCTGCCCACGGTCTTCCGAGGTAGGACATGCGGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS CCA 90 bp TTCTCACGCCAGGGTCCCACGCAAGCACCAGGGCGCGCAGGAGCCTaGCGGCCTCCAGCTCCAGGTGGAAGGTGTGGTCCAGCCGCAGGA +
Preference number: 5 (lower is better)
Translates to: FSRQGPTQAPGRAGA*RPPAPGGRCGPAAG
Trigger: TCCTGCGGCTGGACCACACCTTCCACCTGGAGCTGGAGGCCGCCAGGCTCCTGCGCGCCCTGGTGCTTGCGTGGGACCCTGGCGTGAGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CCA 90 bp CCGCATGTCCTACCTCGGAAGACCGTGGGCAGCAGCACGGTGCCCTaGGCACAGGGCCGGTGCCTTCTCACGCCAGGGTCCCACGCAAGC +
Preference number: 5 (lower is better)
Translates to: PHVLPRKTVGSSTVP*AQGRCLLTPGSHAS
Trigger: GCTTGCGTGGGACCCTGGCGTGAGAAGGCACCGGCCCTGTGCCCAGGGCACCGTGCTGCTGCCCACGGTCTTCCGAGGTAGGACATGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS TCA 90 bp GCTTCCTGCTGCTCCGACAGGGTCAGCTTGGCATACAGCAGCCCCTaGGGCTCCAGGCGCACGGCCAGCTGTTGGGCCTGGCACCCTCGG +
Preference number: 5 (lower is better)
Translates to: ASCCSDRVSLAYSSP*GSRRTASCWAWHPR
Trigger: CCGAGGGTGCCAGGCCCAACAGCTGGCCGTGCGCCTGGAGCCTCAGGGGCTGCTGTATGCCAAGCTGACCCTGTCGGAGCAGCAGGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS CCA 90 bp GCAGGCTCAGGCGGCGCCGCAGTTCCGGCAGCTTCTTCATCTTTATaGAGAGGCGCCTGGCGGGGCCCGGGGACTTGGTGCGGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: AGSGGAAVPAASSSL*RGAWRGPGTWCGRL
Trigger: AAGCCTCCCGCACCAAGTCCCCGGGCCCCGCCAGGCGCCTCTCCATAAAGATGAAGAAGCTGCCGGAACTGCGGCGCCGCCTGAGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS TCA 90 bp GCTTCCTGCTGCTCCGACAGGGTCAGCTTGGCATACAGCAGCCCCTaGGGCTCCAGGCGCACGGCCAGCTGTTGGGCCTGGCACCCTGAG +
Preference number: 5 (lower is better)
Translates to: ASCCSDRVSLAYSSP*GSRRTASCWAWHPE
Trigger: CTCAGGGTGCCAGGCCCAACAGCTGGCCGTGCGCCTGGAGCCTCAGGGGCTGCTGTATGCCAAGCTGACCCTGTCGGAGCAGCAGGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS CCA 90 bp TGTCCTCAGCTGGCTTGGCCCCACCCAGCACCCATCGGCGGCTACTaGGCTCCAGGCTTTGCAGGTAGGCTCCCCGTGCAGGGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: CPQLAWPHPAPIGGY*APGFAGRLPVQGSL
Trigger: CAAGGAGCCCTGCACGGGGAGCCTACCTGCAAAGCCTGGAGCCCAGTAGCCGCCGATGGGTGCTGGGTGGGGCCAAGCCAGCTGAGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000597977.5
ENST00000600252.5
CDS CCA 90 bp CTCGTCCTCGTCCTCGCTGTCACTGCCCGTCACGTGGTCGTAGTCTaGCCCGGACAGGAAATCCCGCCCACAGGGCAGGAAGTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: LVLVLAVTARHVVVV*PGQEIPPTGQEVPP
Trigger: GGGCGGGACTTCCTGCCCTGTGGGCGGGATTTCCTGTCCGGGCCAGACTACGACCACGTGACGGGCAGTGACAGCGAGGACGAGGACGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCTGCGGGCACGAGGCCTaGTGGGCGCCTGGCGTGCCG +
Preference number: 5 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSCGHEA*WAPGVP
Trigger: CGGCACGCCAGGCGCCCACAAGGCCTCGTGCCCGCA...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTCCTTACTAACCGGCCAGGCCCGCGCTCCTaGGCGTCCGACTTTTTCCGG +
Preference number: 5 (lower is better)
Translates to: LGHQGTALATGRPVLTNRPGPRS*ASDFFR
Trigger: CCGGAAAAAGTCGGACGCCAAGGAGCGCGGGCCTGG...CCGGTTAGTAAGGACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600440.5
CDS-3UTR CAA 90 bp AGGTCTGGCTCTCCTTGGTCACCAGGGCACCGCCTTAGCCACTGGGCGCCCGGTTCCTCAGGGATGGGGTaGTACCAGATCTCGCCGGCG +
Preference number: 5 (lower is better)
Translates to: RSGSPWSPGHRLSHWAPGSSGMG*YQISPA
Trigger: CGCCGGCGAGATCTGGTACAACCCCATCCCTGAGGA...ACCGGGCGCCCAGTGGCTAAGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS TCA 90 bp GCCTGGCACCCTGAGGACACAAGGGGGCCTGAGCCGGGTGTGCTCTaGAGCTTCATGTACCCTGGCCTCGCTGCTCCAGGCCACACCTTC +
Preference number: 5 (lower is better)
Translates to: AWHPEDTRGPEPGVL*SFMYPGLAAPGHTF
Trigger: GAAGGTGTGGCCTGGAGCAGCGAGGCCAGGGTACATGAAGCTTCAGAGCACACCCGGCTCAGGCCCCCTTGTGTCCTCAGGGTGCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS GCA 90 bp GTTGGGCCTGGCACCCTGAGGACACAAGGGGGCCTGAGCCGGGTGTaGTCTGAAGCTTCATGTACCCTGGCCTCGCTGCTCCAGGCCACA +
Preference number: 5 (lower is better)
Translates to: VGPGTLRTQGGLSRV*SEASCTLASLLQAT
Trigger: TGTGGCCTGGAGCAGCGAGGCCAGGGTACATGAAGCTTCAGAGCACACCCGGCTCAGGCCCCCTTGTGTCCTCAGGGTGCCAGGCCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS CCA 90 bp CAGTGCCAGGTACCCCAGGCCCTAAAGAGGTGTCCTCAGCTGGCTTaGCCCCACCCAGCACCCATCGGCGGCTACTGGGCTCCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: QCQVPQALKRCPQLA*PHPAPIGGYWAPGF
Trigger: AAAGCCTGGAGCCCAGTAGCCGCCGATGGGTGCTGGGTGGGGCCAAGCCAGCTGAGGACACCTCTTTAGGGCCTGGGGTACCTGGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000597977.5
ENST00000600252.5
CDS-3UTR CAA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGGCGGGGCCCGGGGACTaGGTGCGGGAGGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: PRPQTWQLVSKYRALETGAGPGD*VREALV
Trigger: AACCAAAGCCTCCCGCACCAAGTCCCCGGGCCCCGC...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGCGGGCACGAGGCCTaGTGGGCGCCTGGCGTGCCG +
Preference number: 5 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNCGHEA*WAPGVP
Trigger: CGGCACGCCAGGCGCCCACAAGGCCTCGTGCCCGCA...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCTGCGGGCACGAGGCCTaGTGGGCGCCTGGCGTGCCG +
Preference number: 5 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPCGHEA*WAPGVP
Trigger: CGGCACGCCAGGCGCCCACAAGGCCTCGTGCCCGCA...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS TCA 90 bp CTGGCCAAGACTGCAGCAGGTAGTGCAGCACCTCGATGTGGTGCTTaGAGTCCACTGCACTGGCAAGGCCTGGGCCGGAGCTGCGGGCAC +
Preference number: 5 (lower is better)
Translates to: LAKTAAGSAAPRCGA*SPLHWQGLGRSCGH
Trigger: GTGCCCGCAGCTCCGGCCCAGGCCTTGCCAGTGCAGTGGACTTCAAGCACCACATCGAGGTGCTGCACTACCTGCTGCAGTCTTGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
ENST00000602203.1
CDS GCA 90 bp CTGCAGCAGGTAGTGCAGCACCTCGATGTGGTGCTTGAAGTCCACTaGACTGGCAAGGCCTGGGCCGGAGCTGCGGGCACGAGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LQQVVQHLDVVLEVH*TGKAWAGAAGTRPC
Trigger: ACAAGGCCTCGTGCCCGCAGCTCCGGCCCAGGCCTTGCCAGTGCAGTGGACTTCAAGCACCACATCGAGGTGCTGCACTACCTGCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
ENST00000602203.1
CDS CCA 90 bp CCACTTCGGGGTCTGCCAGCGGCAGGTGCAGAGGTGGCTGTCGTTTaGGTCGCAAGTAAGGCGCGACATCTGGAGATTGTCGGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: PLRGLPAAGAEVAVV*VASKARHLEIVGAG
Trigger: GCCTGCCCCGACAATCTCCAGATGTCGCGCCTTACTTGCGACCCAAACGACAGCCACCTCTGCACCTGCCGCTGGCAGACCCCGAAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGGGGTGGCCGCGCTCCTaGGCGTCCGACTTTTTCCGG +
Preference number: 5 (lower is better)
Translates to: PRPQTWQLVSKYRALETGGWPRS*ASDFFR
Trigger: CCGGAAAAAGTCGGACGCCAAGGAGCGCGGCCACCC...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000342784.7
CDS-3UTR CAA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATGCGGGGCCCGGGGACTaGGTGCGGGAGGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYAGPGD*VREALV
Trigger: AACCAAAGCCTCCCGCACCAAGTCCCCGGGCCCCGC...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CCA 90 bp GGGCCGAGTCACCACTTCGGGGTCTGCCAGCGGCAGGTGCAGAGGTaGCTGTCGTTTGGGTCGCAAGTAAGGCGCGACATCTGGAGATTG +
Preference number: 5 (lower is better)
Translates to: GPSHHFGVCQRQVQR*LSFGSQVRRDIWRL
Trigger: CAATCTCCAGATGTCGCGCCTTACTTGCGACCCAAACGACAGCCACCTCTGCACCTGCCGCTGGCAGACCCCGAAGTGGTGACTCGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CCA 90 bp CCCAGCCCCTCACTGCCTGCAGAGCAGCCCTGTGCAATTGATCAGTaGGTGGGATGCTGTGTACGGCCCTGGCCGGCCCCTGATAAGTCA +
Preference number: 5 (lower is better)
Translates to: PSPSLPAEQPCAIDQ*VGCCVRPWPAPDKS
Trigger: TGACTTATCAGGGGCCGGCCAGGGCCGTACACAGCATCCCACCCACTGATCAATTGCACAGGGCTGCTCTGCAGGCAGTGAGGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CAA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACGCGGGGCCCGGGGACTaGGTGCGGGAGGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNAGPGD*VREALV
Trigger: AACCAAAGCCTCCCGCACCAAGTCCCCGGGCCCCGC...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAGCGCACGGCCAGCTGTaGGGCCTGGCACCCTCGGAA +
Preference number: 5 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVAHGQL*GLAPSE
Trigger: TTCCGAGGGTGCCAGGCCCAACAGCTGGCCGTGCGC...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS-3UTR CAA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCCGCGACATCTGGAGATaGTCGGGGCAGGCGGGGATC +
Preference number: 5 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSRDIWR*SGQAGI
Trigger: GATCCCCGCCTGCCCCGACAATCTCCAGATGTCGCG...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CCA 90 bp GTGCAGAGGTGGCTGTCGTTTGGGTCGCAAGTAAGGCGCGACATCTaGAGATTGTCGGGGCAGGCGGGGATCTGGCCAAGACTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: VQRWLSFGSQVRRDI*RLSGQAGIWPRLQQ
Trigger: CTGCTGCAGTCTTGGCCAGATCCCCGCCTGCCCCGACAATCTCCAGATGTCGCGCCTTACTTGCGACCCAAACGACAGCCACCTCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CCA 90 bp GCCCCTCACTGCCTGCAGAGCAGCCCTGTGCAATTGATCAGTGGGTaGGATGCTGTGTACGGCCCTGGCCGGCCCCTGATAAGTCATGGT +
Preference number: 5 (lower is better)
Translates to: APHCLQSSPVQLISG*DAVYGPGRPLISHG
Trigger: ACCATGACTTATCAGGGGCCGGCCAGGGCCGTACACAGCATCCCACCCACTGATCAATTGCACAGGGCTGCTCTGCAGGCAGTGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CAA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCGCGCACGGCCAGCTGTaGGGCCTGGCACCCTCGGAA +
Preference number: 5 (lower is better)
Translates to: KYRALETGNESQPYTRLVAHGQL*GLAPSE
Trigger: TTCCGAGGGTGCCAGGCCCAACAGCTGGCCGTGCGC...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS-3UTR CAA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGCGCGACATCTGGAGATaGTCGGGGCAGGCGGGGATC +
Preference number: 5 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRRDIWR*SGQAGI
Trigger: GATCCCCGCCTGCCCCGACAATCTCCAGATGTCGCG...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS TCA 90 bp ACTGTCCCGCTCAAAGGCATCCCGAAGCTCTTTCTTCACTGCCGCTaGGCCACAAAGACGGTACAGTCCCACTACCCGCAGCCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: TVPLKGIPKLFLHCR*ATKTVQSHYPQPSA
Trigger: CGCCGAGGGCTGCGGGTAGTGGGACTGTACCGTCTTTGTGGCTCAGCGGCAGTGAAGAAAGAGCTTCGGGATGCCTTTGAGCGGGACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
ENST00000602203.1
CDS-3UTR CAA 90 bp ACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACACACACAACTGGGCTCCAGGCTTaGCAGGTAGGCTCCCCGTGC +
Preference number: 5 (lower is better)
Translates to: TPASDVSTHTSPHRHTHTTGLQA*QVGSPC
Trigger: GCACGGGGAGCCTACCTGCAAAGCCTGGAGCCCAGT...TGTGTGTGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600252.5
CDS-3UTR CAA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGGCTCCAGGCTTaGCAGGTAGGCTCCCCGTGC +
Preference number: 5 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVTGLQA*QVGSPC
Trigger: GCACGGGGAGCCTACCTGCAAAGCCTGGAGCCCAGT...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600252.5
CDS-3UTR CAA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACCAGGTCTGGCTCTCCTaGGTCACCAGGGCACCGCCT +
Preference number: 5 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNQVWLS*VTRAPP
Trigger: AGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCTG...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS GCA 90 bp ACCGGGGTCCCACCCCGTCATCTGGCTCAGAGGCACACGTTGATTTaGTTGGAGAGCTCTCTCTCCAGATCCAGGATGAGGGCGTCGAAG +
Preference number: 5 (lower is better)
Translates to: TGVPPRHLAQRHTLI*LESSLSRSRMRASK
Trigger: CTTCGACGCCCTCATCCTGGATCTGGAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAGCCAGATGACGGGGTGGGACCCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCCGCGACATCTGGAGATaGTCGGGGCAGGCGGGGATC +
Preference number: 5 (lower is better)
Translates to: KYRALETGNESQPYTRLVRDIWR*SGQAGI
Trigger: GATCCCCGCCTGCCCCGACAATCTCCAGATGTCGCG...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAAGATTCAGGTGCGGGTaGAAGGGCGCATCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQRFRCG*KGASKS
Trigger: CGACTTCGATGCGCCCTTCAACCCGCACCTGAATCT...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACAAGATTCAGGTGCGGGTaGAAGGGCGCATCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTRFRCG*KGASKS
Trigger: CGACTTCGATGCGCCCTTCAACCCGCACCTGAATCT...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS GCA 90 bp TCACTGCCTGCAGAGCAGCCCTGTGCAATTGATCAGTGGGTGGGATaGTGTGTACGGCCCTGGCCGGCCCCTGATAAGTCATGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: SLPAEQPCAIDQWVG*CVRPWPAPDKSWFL
Trigger: AAGGAACCATGACTTATCAGGGGCCGGCCAGGGCCGTACACAGCATCCCACCCACTGATCAATTGCACAGGGCTGCTCTGCAGGCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CAA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCTCCTCAGGGATGGGGTaGTACCAGATCTCGCCGGCG +
Preference number: 5 (lower is better)
Translates to: GEALGAQERWSQPLVPKISSGMG*YQISPA
Trigger: CGCCGGCGAGATCTGGTACAACCCCATCCCTGAGGA...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACAACCTCGATGTGGTGCTaGAAGTCCACTGCACTGGCA +
Preference number: 5 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTTSMWC*KSTALA
Trigger: TGCCAGTGCAGTGGACTTCAAGCACCACATCGAGGT...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGAGCAGCCCTGTGCAATaGATCAGTGGGTGGGATGCT +
Preference number: 5 (lower is better)
Translates to: PRPQTWQLVSKYRALETGSSPVQ*ISGWDA
Trigger: AGCATCCCACCCACTGATCAATTGCACAGGGCTGCT...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CAA 90 bp GAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTAGATTCAGGTGCGGGTaGAAGGGCGCATCGAAGTCG +
Preference number: 5 (lower is better)
Translates to: EGRLEVTHHTRVMLTVTGRFRCG*KGASKS
Trigger: CGACTTCGATGCGCCCTTCAACCCGCACCTGAATCT...ACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGGAGGCACACGTTGATTaGCTTGGAGAGCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: PRPQTWQLVSKYRALETGEAHVD*LGELSL
Trigger: GAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCTC...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCGCTCAGAGGCACACGTaGATTTGCTTGGAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSAQRHT*ICLESS
Trigger: AGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAGC...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGCAGGTCTGGCTCTCCTaGGTCACCAGGGCACCGCCT +
Preference number: 5 (lower is better)
Translates to: PQTVPHASLCVVQGREKQQVWLS*VTRAPP
Trigger: AGGCGGTGCCCTGGTGACCAAGGAGAGCCAGACCTG...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CCCAGGCCCCAGACTTGGCAACTAGTGTCCAAATACCGGGCCCTGGAAACTGGGCTAATACTGATTTGGTaGGCAGCAGCAAGAGGGCCG +
Preference number: 5 (lower is better)
Translates to: PRPQTWQLVSKYRALETGLILIW*AAARGP
Trigger: CGGCCCTCTTGCTGCTGCCAACCAAATCAGTATTAG...CCCAGTTTCCAGGGCCCGGTATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS GCA 90 bp CTCTCCAGATCCAGGATGAGGGCGTCGAAGTCTTTGAGATTCAGGTaGGGGTTGAAGGGCGCATCGAAGTCGTCTTCGAAGTCACCGGTG +
Preference number: 5 (lower is better)
Translates to: LSRSRMRASKSLRFR*GLKGASKSSSKSPV
Trigger: CACCGGTGACTTCGAAGACGACTTCGATGCGCCCTTCAACCCGCACCTGAATCTCAAAGACTTCGACGCCCTCATCCTGGATCTGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CCA 90 bp TGGGTGGGATGCTGTGTACGGCCCTGGCCGGCCCCTGATAAGTCATaGTTCCTTGGATCCTGCTGTTTTGTTTGGAATAGGCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: WVGCCVRPWPAPDKS*FLGSCCFVWNRQPQ
Trigger: CTGTGGCTGCCTATTCCAAACAAAACAGCAGGATCCAAGGAACCATGACTTATCAGGGGCCGGCCAGGGCCGTACACAGCATCCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS CCA 90 bp CAGCCCTGTGCAATTGATCAGTGGGTGGGATGCTGTGTACGGCCCTaGCCGGCCCCTGATAAGTCATGGTTCCTTGGATCCTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: QPCAIDQWVGCCVRP*PAPDKSWFLGSCCF
Trigger: AAAACAGCAGGATCCAAGGAACCATGACTTATCAGGGGCCGGCCAGGGCCGTACACAGCATCCCACCCACTGATCAATTGCACAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CAA 90 bp CCCCACACGCCTGCTTCAGACGTGTCCACGCACACCAGTCCTCACAGACACACAATGCCAGTGATGACATaGATATCGGGGTACAGGTCC +
Preference number: 5 (lower is better)
Translates to: PHTPASDVSTHTSPHRHTMPVMT*ISGYRS
Trigger: GGACCTGTACCCCGATATCAATGTCATCACTGGCAT...TGTGTGTCTGTGAGGACTGGTGTGCGTGGACACGTCTGAAGCAGGCGTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGACCTCGATGTGGTGCTaGAAGTCCACTGCACTGGCA +
Preference number: 5 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPTSMWC*KSTALA
Trigger: TGCCAGTGCAGTGGACTTCAAGCACCACATCGAGGT...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACACCTCGATGTGGTGCTaGAAGTCCACTGCACTGGCA +
Preference number: 5 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNTSMWC*KSTALA
Trigger: TGCCAGTGCAGTGGACTTCAAGCACCACATCGAGGT...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAACACACGTTGATTTGCTaGGAGAGCTCTCTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: HTRVMLTVTGVAPAKGRQHTLIC*ESSLSR
Trigger: TCTGGAGAGAGAGCTCTCCAAGCAAATCAACGTGTG...TTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp AGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAGCCACACGTTGATTTGCTaGGAGAGCTCTCTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SLSHTRDWSRGNSLATRSHTLIC*ESSLSR
Trigger: TCTGGAGAGAGAGCTCTCCAAGCAAATCAACGTGTG...GCTCCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGCCCCAGGCCCCAGACTaGGCAACTAGTGTCCAAATA +
Preference number: 5 (lower is better)
Translates to: LEVTHHTRVMLTVTGVAPPQAPD*ATSVQI
Trigger: TATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGGG...CGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGCAAAAGGGGAAGCCCTaGGTGCTCAGGAAAGATGGT +
Preference number: 5 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRQKGKP*VLRKDG
Trigger: ACCATCTTTCCTGAGCACCAAGGGCTTCCCCTTTTG...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp GGAGGGAACCGTACTCTCCCACTGGAACTCTGGGGCCCACTGAGGCACCATTATGCAAGGAGATGGGGATaGGAAAGGCCAGACTCTGTT +
Preference number: 5 (lower is better)
Translates to: GGNRTLPLELWGPLRHHYARRWG*ERPDSV
Trigger: AACAGAGTCTGGCCTTTCCAATCCCCATCTCCTTGC...ATAATGGTGCCTCAGTGGGCCCCAGAGTTCCAGTGGGAGAGTACGGTTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGGAGCTGGTGCTCACCTaGGGGAAGGGGATGGGAAGC +
Preference number: 5 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLELVLT*GKGMGS
Trigger: GCTTCCCATCCCCTTCCCCAAGGTGAGCACCAGCTC...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS GCA 90 bp GTACGGCCCTGGCCGGCCCCTGATAAGTCATGGTTCCTTGGATCCTaGTGTTTTGTTTGGAATAGGCAGCCACAGGCTAGCGATCTCAGT +
Preference number: 5 (lower is better)
Translates to: VRPWPAPDKSWFLGS*CFVWNRQPQASDLS
Trigger: ACTGAGATCGCTAGCCTGTGGCTGCCTATTCCAAACAAAACAGCAGGATCCAAGGAACCATGACTTATCAGGGGCCGGCCAGGGCCGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS CCA 90 bp GGCCATGGCCTCCAGTACCACCTTATACAGGGGCTGGGTGATGAGTaGGGTGGGCAACTCTCGAAGATAATCCTTGAGGATGCCAGTGAT +
Preference number: 5 (lower is better)
Translates to: GHGLQYHLIQGLGDE*GGQLSKIILEDASD
Trigger: ATCACTGGCATCCTCAAGGATTATCTTCGAGAGTTGCCCACCCCACTCATCACCCAGCCCCTGTATAAGGTGGTACTGGAGGCCATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp GGGGAAGCCCTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCAGGGCGTCGAAGTCTTaGAGATTCAGGTGCGGGTTG +
Preference number: 5 (lower is better)
Translates to: GEALGAQERWSQPLVPKIRASKS*RFRCGL
Trigger: CAACCCGCACCTGAATCTCAAAGACTTCGACGCCCT...GATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAGGGCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCGCTCAGAGGCACACGTaGATTTGCTTGGAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPAQRHT*ICLESS
Trigger: AGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAGC...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTACAAAAGGGGAAGCCCTaGGTGCTCAGGAAAGATGGT +
Preference number: 5 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVQKGKP*VLRKDG
Trigger: ACCATCTTTCCTGAGCACCAAGGGCTTCCCCTTTTG...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACCTAATACTGATTTGGTaGGCAGCAGCAAGAGGGCCG +
Preference number: 5 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNLILIW*AAARGP
Trigger: CGGCCCTCTTGCTGCTGCCAACCAAATCAGTATTAG...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CACCAGGGTGATGCTCACAGTAACTGGTGTTGCCCCGGCCAAGGGGAGGCAAGACTCTGTTATCTCCATTaGCTGACTAGAGGCCAATCG +
Preference number: 5 (lower is better)
Translates to: HQGDAHSNWCCPGQGEARLCYLH*LTRGQS
Trigger: CGATTGGCCTCTAGTCAGCAAATGGAGATAACAGAG...TCTTGCCTCCCCTTGGCCGGGGCAACACCAGTTACTGTGAGCATCACCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CTTGGTGCTCAGGAAAGATGGTCACAACCGCTGGTCCCTAAAATCCCCAGGCCCGCAAGGAGATGGGGATaGGAAAGGCCAGACTCTGTT +
Preference number: 5 (lower is better)
Translates to: LGAQERWSQPLVPKIPRPARRWG*ERPDSV
Trigger: AACAGAGTCTGGCCTTTCCAATCCCCATCTCCTTGC...GGGCCTGGGGATTTTAGGGACCAGCGGTTGTGACCATCTTTCCTGAGCACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAATGCCAGTGATGACATaGATATCGGGGTACAGGTCC +
Preference number: 5 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVMPVMT*ISGYRS
Trigger: GGACCTGTACCCCGATATCAATGTCATCACTGGCAT...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACATGCCAGTGATGACATaGATATCGGGGTACAGGTCC +
Preference number: 5 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNMPVMT*ISGYRS
Trigger: GGACCTGTACCCCGATATCAATGTCATCACTGGCAT...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp GCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAACCACACGTTGATTTGCTaGGAGAGCTCTCTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ARGPTRGDSPHQGDAHSNHTLIC*ESSLSR
Trigger: TCTGGAGAGAGAGCTCTCCAAGCAAATCAACGTGTG...GTTACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCGAGGCACACGTTGATTaGCTTGGAGAGCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: KYRALETGNESQPYTRLVEAHVD*LGELSL
Trigger: GAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCTC...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCGCTCAGAGGCACACGTaGATTTGCTTGGAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: KYRALETGNESQPYTRLVAQRHT*ICLESS
Trigger: AGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAGC...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp AAATACCGGGCCCTGGAAACTGGGAATGAGTCTCAGCCATACACGCGACTGGTCGCAAGGAGATGGGGATaGGAAAGGCCAGACTCTGTT +
Preference number: 5 (lower is better)
Translates to: KYRALETGNESQPYTRLVARRWG*ERPDSV
Trigger: AACAGAGTCTGGCCTTTCCAATCCCCATCTCCTTGC...GACCAGTCGCGTGTATGGCTGAGACTCATTCCCAGTTTCCAGGGCCCGGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp ATGAGTCTCAGCCATACACGCGACTGGTCCCGTGGTAACTCGCTGGCAACCAGGAAAGCTAATACTGATTaGGTTGGCAGCAGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: MSLSHTRDWSRGNSLATRKANTD*VGSSKR
Trigger: CCTCTTGCTGCTGCCAACCAAATCAGTATTAGCTTT...CCTGGTTGCCAGCGAGTTACCACGGGACCAGTCGCGTGTATGGCTGAGACTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGGAGGCACACGTTGATTaGCTTGGAGAGCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: PQTVPHASLCVVQGREKQEAHVD*LGELSL
Trigger: GAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCTC...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CAGCAAGAGGGCCGACTAGAGGTGACTCACCACACCAGGGTGATGCTCACAGTAAAAGCTAATACTGATTaGGTTGGCAGCAGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: QQEGRLEVTHHTRVMLTVKANTD*VGSSKR
Trigger: CCTCTTGCTGCTGCCAACCAAATCAGTATTAGCTTT...TACTGTGAGCATCACCCTGGTGTGGTGAGTCACCTCTAGTCGGCCCTCTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp GTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTCAAAAGGGGAAGCCCTaGGTGCTCAGGAAAGATGGT +
Preference number: 5 (lower is better)
Translates to: VFVSSKGGRNSAVLKANTQKGKP*VLRKDG
Trigger: ACCATCTTTCCTGAGCACCAAGGGCTTCCCCTTTTG...AGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp CCACAAACAGTGCCTCATGCTAGTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGCTCTGTTATCTCCATTaGCTGACTAGAGGCCAATCG +
Preference number: 5 (lower is better)
Translates to: PQTVPHASLCVVQGREKQLCYLH*LTRGQS
Trigger: CGATTGGCCTCTAGTCAGCAAATGGAGATAACAGAG...CTGTTTCTCCCTCCCTTGGACGACACAAAGACTAGCATGAGGCACTGTTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGCTCTGTTATCTCCATTaGCTGACTAGAGGCCAATCG +
Preference number: 5 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLLCYLH*LTRGQS
Trigger: CGATTGGCCTCTAGTCAGCAAATGGAGATAACAGAG...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp GTCTTTGTGTCGTCCAAGGGAGGGAGAAACAGTGCAGTGCTCAAAGCTAATACTAAAGCTAATACTGATTaGGTTGGCAGCAGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: VFVSSKGGRNSAVLKANTKANTD*VGSSKR
Trigger: CCTCTTGCTGCTGCCAACCAAATCAGTATTAGCTTT...AGTATTAGCTTTGAGCACTGCACTGTTTCTCCCTCCCTTGGACGACACAAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp ACACACATGCATGGAGGCAATAAATATGTTCCGTACCAGACTGCCCCCAGCCTGATAAGTCATGGTTCCTaGGATCCTGCTGTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: THMHGGNKYVPYQTAPSLISHGS*DPAVLF
Trigger: AAACAAAACAGCAGGATCCAAGGAACCATGACTTAT...CAGGCTGGGGGCAGTCTGGTACGGAACATATTTATTGCCTCCATGCATGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS-3UTR CAA 90 bp ACCTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGAGGGCGTCGAAGTCTTaGAGATTCAGGTGCGGGTTG +
Preference number: 5 (lower is better)
Translates to: TCAYLFIIHKDGGAEKKRRASKS*RFRCGL
Trigger: CAACCCGCACCTGAATCTCAAAGACTTCGACGCCCT...CCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp ACCTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGCCCCAGGCCCCAGACTaGGCAACTAGTGTCCAAATA +
Preference number: 5 (lower is better)
Translates to: TCAYLFIIHKDGGAEKKRPQAPD*ATSVQI
Trigger: TATTTGGACACTAGTTGCCAAGTCTGGGGCCTGGGG...CCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS-3UTR CAA 90 bp ACCTGTGCATATTTATTTATTATCCACAAAGATGGAGGTGCGGAAAAGAAGAGGCTAATACTGATTTGGTaGGCAGCAGCAAGAGGGCCG +
Preference number: 5 (lower is better)
Translates to: TCAYLFIIHKDGGAEKKRLILIW*AAARGP
Trigger: CGGCCCTCTTGCTGCTGCCAACCAAATCAGTATTAG...CCTCTTCTTTTCCGCACCTCCATCTTTGTGGATAATAAATAAATATGCACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS GCA 72 bp GTGCAGGCTGAGGCGGCCCCAGAGTGCGGCCGGGGGTaGCCGGGCTGCGGGACCCACCTCGTAGGGCCGGAA +
Preference number: 6 (lower is better)
Translates to: VQAEAAPECGRG*PGCGTHLVGPE
Trigger: TTCCGGCCCTACGAGGTGGGTCCCGCAGCCCGGGCACCCCCGGCCGCACTCTGGGGCCGCCTCAGCCTGCAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CCA 72 bp GGCCTGGGACCCTTCGGGAGCCTGGGGCTCTGGCTCTaGAGGGCTGGGCTCTGGGCGCTGGGCTGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: GLGPFGSLGLWL*RAGLWALGWVA
Trigger: GGCCACCCAGCCCAGCGCCCAGAGCCCAGCCCTCCAGAGCCAGAGCCCCAGGCTCCCGAAGGGTCCCAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000597977.5
ENST00000600252.5
CDS CCA 72 bp GGGCCGGAGCTGCGGGCACGAGGCCTTGTGGGCGCCTaGCGTGCCGGCAGCAGCACAGGCCCGAAGCACACG +
Preference number: 6 (lower is better)
Translates to: GPELRARGLVGA*RAGSSTGPKHT
Trigger: CGTGTGCTTCGGGCCTGTGCTGCTGCCGGCACGCCAGGCGCCCACAAGGCCTCGTGCCCGCAGCTCCGGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
ENST00000602203.1
CDS CCA 72 bp CAAGGCCTGGGCCGGAGCTGCGGGCACGAGGCCTTGTaGGCGCCTGGCGTGCCGGCAGCAGCACAGGCCCGA +
Preference number: 6 (lower is better)
Translates to: QGLGRSCGHEAL*APGVPAAAQAR
Trigger: TCGGGCCTGTGCTGCTGCCGGCACGCCAGGCGCCCACAAGGCCTCGTGCCCGCAGCTCCGGCCCAGGCCTTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
ENST00000602203.1
CDS CCA 72 bp GGGCTGCGGGACCCACCTCGTAGGGCCGGAAGGAGGTaGGTGATGGGGGCCCAGCTGGGCGCTCCGGTGAGT +
Preference number: 6 (lower is better)
Translates to: GLRDPPRRAGRR*VMGAQLGAPVS
Trigger: ACTCACCGGAGCGCCCAGCTGGGCCCCCATCACCCACCTCCTTCCGGCCCTACGAGGTGGGTCCCGCAGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CAA 90 bp CCACTGCACTGGCAAGGCCTGGGCCGGAGCTGCGGGCACGAGGCCTaGTGGGCGCCTGGCGTGCCGGCAGCAGCACAGGCCCGAAGCACA +
Preference number: 6 (lower is better)
Translates to: PLHWQGLGRSCGHEA*WAPGVPAAAQARST
Trigger: TGTGCTTCGGGCCTGTGCTGCTGCCGGCACGCCAGGCGCCCACAAGGCCTCGTGCCCGCAGCTCCGGCCCAGGCCTTGCCAGTGCAGTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
ENST00000602203.1
CDS GCA 72 bp CCTGGCACCCTCGGAAGACCGTGGGCAGCAGCACGGTaGCCTGGGCACAGGGCCGGTGCCTTCTCACGCCAG +
Preference number: 6 (lower is better)
Translates to: PGTLGRPWAAAR*PGHRAGAFSRQ
Trigger: CTGGCGTGAGAAGGCACCGGCCCTGTGCCCAGGGCACCGTGCTGCTGCCCACGGTCTTCCGAGGGTGCCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000600440.5
CDS GCA 72 bp TCCTCGACCGCGGGGCCGAGTCACCACTTCGGGGTCTaGCAGCGGCAGGTGCAGAGGTGGCTGTCGTTTGGG +
Preference number: 6 (lower is better)
Translates to: SSTAGPSHHFGV*QRQVQRWLSFG
Trigger: CCCAAACGACAGCCACCTCTGCACCTGCCGCTGGCAGACCCCGAAGTGGTGACTCGGCCCCGCGGTCGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CCA 72 bp TGGGCTCTGGGCGCTGGGCTGGGTGGCCGCGCTCCTTaGCGTCCGACTTTTTCCGGGGAAGTTTCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: WALGAGLGGRAP*RPTFSGEVSPG
Trigger: GCCGGGAGAAACTTCCCCGGAAAAAGTCGGACGCCAAGGAGCGCGGCCACCCAGCCCAGCGCCCAGAGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000597977.5
CDS CCA 72 bp CTGGCTTGGCCCCACCCAGCACCCATCGGCGGCTACTaGGCTCCAGGCTTTGCAGGTAGGCTCCCCGTGCAG +
Preference number: 6 (lower is better)
Translates to: LAWPHPAPIGGY*APGFAGRLPVQ
Trigger: CTGCACGGGGAGCCTACCTGCAAAGCCTGGAGCCCAGTAGCCGCCGATGGGTGCTGGGTGGGGCCAAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000597977.5
ENST00000600252.5
CDS CCA 72 bp GGCGGCGCCGCAGTTCCGGCAGCTTCTTCATCTTTATaGAGAGGCGCCTGGCGGGGCCCGGGGACTTGGTGC +
Preference number: 6 (lower is better)
Translates to: GGAAVPAASSSL*RGAWRGPGTWC
Trigger: GCACCAAGTCCCCGGGCCCCGCCAGGCGCCTCTCCATAAAGATGAAGAAGCTGCCGGAACTGCGGCGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CAA 72 bp CTGGGCTCTGGGCGCTGGGCTGGGTGGCCGCGCTCCTaGGCGTCCGACTTTTTCCGGGGAAGTTTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: LGSGRWAGWPRS*ASDFFRGSFSR
Trigger: CCGGGAGAAACTTCCCCGGAAAAAGTCGGACGCCAAGGAGCGCGGCCACCCAGCCCAGCGCCCAGAGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342784.7
ENST00000597977.5
CDS TCA 72 bp TGCTCCGACAGGGTCAGCTTGGCATACAGCAGCCCCTaGGGCTCCAGGCGCACGGCCAGCTGTTGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: CSDRVSLAYSSP*GSRRTASCWAW
Trigger: CCAGGCCCAACAGCTGGCCGTGCGCCTGGAGCCTCAGGGGCTGCTGTATGCCAAGCTGACCCTGTCGGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS GCA 72 bp GCTCGCCGACCTCCTCGTCCTCGTCCTCGCTGTCACTaGCCGTCACGTGGTCGTAGTCTGGCCCGGACAGGA +
Preference number: 6 (lower is better)
Translates to: ARRPPRPRPRCH*PSRGRSLARTG
Trigger: TCCTGTCCGGGCCAGACTACGACCACGTGACGGGCAGTGACAGCGAGGACGAGGACGAGGAGGTCGGCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS GCA 72 bp ATGTCCTACCTCGGAAGACCGTGGGCAGCAGCACGGTaGCCTGGGCACAGGGCCGGTGCCTTCTCACGCCAG +
Preference number: 6 (lower is better)
Translates to: MSYLGRPWAAAR*PGHRAGAFSRQ
Trigger: CTGGCGTGAGAAGGCACCGGCCCTGTGCCCAGGGCACCGTGCTGCTGCCCACGGTCTTCCGAGGTAGGACAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS CCA 72 bp GATGTGGTGCTTGAAGTCCACTGCACTGGCAAGGCCTaGGCCGGAGCTGCGGGCACGAGGCCTTGTGGGCGC +
Preference number: 6 (lower is better)
Translates to: DVVLEVHCTGKA*AGAAGTRPCGR
Trigger: GCGCCCACAAGGCCTCGTGCCCGCAGCTCCGGCCCAGGCCTTGCCAGTGCAGTGGACTTCAAGCACCACATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
ENST00000602203.1
CDS GCA 72 bp AAGACGCGGGGCTCAGCTGTGGCAGGGGCTTCCTGCTaGTCCGACAGGGTCAGCTTGGCATACAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: KTRGSAVAGASC*SDRVSLAYSSP
Trigger: GGGGCTGCTGTATGCCAAGCTGACCCTGTCGGAGCAGCAGGAAGCCCCTGCCACAGCTGAGCCCCGCGTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS TCA 72 bp CCTGAGGACACAAGGGGGCCTGAGCCGGGTGTGCTCTaGAGCTTCATGTACCCTGGCCTCGCTGCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: PEDTRGPEPGVL*SFMYPGLAAPG
Trigger: GCCTGGAGCAGCGAGGCCAGGGTACATGAAGCTTCAGAGCACACCCGGCTCAGGCCCCCTTGTGTCCTCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS GCA 72 bp GTAGTGCAGCACCTCGATGTGGTGCTTGAAGTCCACTaGACTGGCAAGGCCTGGGCCGGAGCTGCGGGCACG +
Preference number: 6 (lower is better)
Translates to: VVQHLDVVLEVH*TGKAWAGAAGT
Trigger: CGTGCCCGCAGCTCCGGCCCAGGCCTTGCCAGTGCAGTGGACTTCAAGCACCACATCGAGGTGCTGCACTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
ENST00000602203.1
CDS GCA 72 bp GGCACCCTGAGGACACAAGGGGGCCTGAGCCGGGTGTaGTCTGAAGCTTCATGTACCCTGGCCTCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: GTLRTQGGLSRV*SEASCTLASLL
Trigger: GAGCAGCGAGGCCAGGGTACATGAAGCTTCAGAGCACACCCGGCTCAGGCCCCCTTGTGTCCTCAGGGTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS CCA 72 bp GTTCCGGCAGCTTCTTCATCTTTATGGAGAGGCGCCTaGCGGGGCCCGGGGACTTGGTGCGGGAGGCTTTGG +
Preference number: 6 (lower is better)
Translates to: VPAASSSLWRGA*RGPGTWCGRLW
Trigger: CCAAAGCCTCCCGCACCAAGTCCCCGGGCCCCGCCAGGCGCCTCTCCATAAAGATGAAGAAGCTGCCGGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CCA 72 bp GTCCTCGCTGTCACTGCCCGTCACGTGGTCGTAGTCTaGCCCGGACAGGAAATCCCGCCCACAGGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: VLAVTARHVVVV*PGQEIPPTGQE
Trigger: TTCCTGCCCTGTGGGCGGGATTTCCTGTCCGGGCCAGACTACGACCACGTGACGGGCAGTGACAGCGAGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CCA 72 bp CACCACTTCGGGGTCTGCCAGCGGCAGGTGCAGAGGTaGCTGTCGTTTGGGTCGCAAGTAAGGCGCGACATC +
Preference number: 6 (lower is better)
Translates to: HHFGVCQRQVQR*LSFGSQVRRDI
Trigger: GATGTCGCGCCTTACTTGCGACCCAAACGACAGCCACCTCTGCACCTGCCGCTGGCAGACCCCGAAGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CCA 72 bp TCACTGCCTGCAGAGCAGCCCTGTGCAATTGATCAGTaGGTGGGATGCTGTGTACGGCCCTGGCCGGCCCCT +
Preference number: 6 (lower is better)
Translates to: SLPAEQPCAIDQ*VGCCVRPWPAP
Trigger: AGGGGCCGGCCAGGGCCGTACACAGCATCCCACCCACTGATCAATTGCACAGGGCTGCTCTGCAGGCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS TCA 72 bp ACTGCAGCAGGTAGTGCAGCACCTCGATGTGGTGCTTaGAGTCCACTGCACTGGCAAGGCCTGGGCCGGAGC +
Preference number: 6 (lower is better)
Translates to: TAAGSAAPRCGA*SPLHWQGLGRS
Trigger: GCTCCGGCCCAGGCCTTGCCAGTGCAGTGGACTTCAAGCACCACATCGAGGTGCTGCACTACCTGCTGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
ENST00000602203.1
CDS CCA 72 bp TGCCTGCAGAGCAGCCCTGTGCAATTGATCAGTGGGTaGGATGCTGTGTACGGCCCTGGCCGGCCCCTGATA +
Preference number: 6 (lower is better)
Translates to: CLQSSPVQLISG*DAVYGPGRPLI
Trigger: TATCAGGGGCCGGCCAGGGCCGTACACAGCATCCCACCCACTGATCAATTGCACAGGGCTGCTCTGCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS GCA 72 bp GCAGAGCAGCCCTGTGCAATTGATCAGTGGGTGGGATaGTGTGTACGGCCCTGGCCGGCCCCTGATAAGTCA +
Preference number: 6 (lower is better)
Translates to: AEQPCAIDQWVG*CVRPWPAPDKS
Trigger: TGACTTATCAGGGGCCGGCCAGGGCCGTACACAGCATCCCACCCACTGATCAATTGCACAGGGCTGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS CCA 72 bp TGGCTGTCGTTTGGGTCGCAAGTAAGGCGCGACATCTaGAGATTGTCGGGGCAGGCGGGGATCTGGCCAAGA +
Preference number: 6 (lower is better)
Translates to: WLSFGSQVRRDI*RLSGQAGIWPR
Trigger: TCTTGGCCAGATCCCCGCCTGCCCCGACAATCTCCAGATGTCGCGCCTTACTTGCGACCCAAACGACAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
ENST00000602203.1
CDS CCA 72 bp GGTCTGCCAGCGGCAGGTGCAGAGGTGGCTGTCGTTTaGGTCGCAAGTAAGGCGCGACATCTGGAGATTGTC +
Preference number: 6 (lower is better)
Translates to: GLPAAGAEVAVV*VASKARHLEIV
Trigger: GACAATCTCCAGATGTCGCGCCTTACTTGCGACCCAAACGACAGCCACCTCTGCACCTGCCGCTGGCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CAA 72 bp TCGTTTGGGTCGCAAGTAAGGCGCGACATCTGGAGATaGTCGGGGCAGGCGGGGATCTGGCCAAGACTGCAG +
Preference number: 6 (lower is better)
Translates to: SFGSQVRRDIWR*SGQAGIWPRLQ
Trigger: CTGCAGTCTTGGCCAGATCCCCGCCTGCCCCGACAATCTCCAGATGTCGCGCCTTACTTGCGACCCAAACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
ENST00000602203.1
CDS CAA 72 bp GGGGTCCCACCCCGTCATCTGGCTCAGAGGCACACGTaGATTTGCTTGGAGAGCTCTCTCTCCAGATCCAGG +
Preference number: 6 (lower is better)
Translates to: GVPPRHLAQRHT*ICLESSLSRSR
Trigger: CCTGGATCTGGAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAGCCAGATGACGGGGTGGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CAA 90 bp GGGGTCCCACCCCGTCATCTGGCTCAGAGGCACACGTTGATTTGCTaGGAGAGCTCTCTCTCCAGATCCAGGATGAGGGCGTCGAAGTCT +
Preference number: 6 (lower is better)
Translates to: GVPPRHLAQRHTLIC*ESSLSRSRMRASKS
Trigger: AGACTTCGACGCCCTCATCCTGGATCTGGAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAGCCAGATGACGGGGTGGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CAA 90 bp AACCGGGGTCCCACCCCGTCATCTGGCTCAGAGGCACACGTTGATTaGCTTGGAGAGCTCTCTCTCCAGATCCAGGATGAGGGCGTCGAA +
Preference number: 6 (lower is better)
Translates to: NRGPTPSSGSEAHVD*LGELSLQIQDEGVE
Trigger: TTCGACGCCCTCATCCTGGATCTGGAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAGCCAGATGACGGGGTGGGACCCCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CAA 90 bp TTACTAACCGGGGTCCCACCCCGTCATCTGGCTCAGAGGCACACGTaGATTTGCTTGGAGAGCTCTCTCTCCAGATCCAGGATGAGGGCG +
Preference number: 6 (lower is better)
Translates to: LLTGVPPRHLAQRHT*ICLESSLSRSRMRA
Trigger: CGCCCTCATCCTGGATCTGGAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAGCCAGATGACGGGGTGGGACCCCGGTTAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS TCA 72 bp GGGTCCCACCCCGTCATCTGGCTCAGAGGCACACGTTaGTTTGCTTGGAGAGCTCTCTCTCCAGATCCAGGA +
Preference number: 6 (lower is better)
Translates to: GSHPVIWLRGTR*FAWRALSPDPG
Trigger: TCCTGGATCTGGAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAGCCAGATGACGGGGTGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CCA 72 bp GCAATTGATCAGTGGGTGGGATGCTGTGTACGGCCCTaGCCGGCCCCTGATAAGTCATGGTTCCTTGGATCC +
Preference number: 6 (lower is better)
Translates to: AIDQWVGCCVRP*PAPDKSWFLGS
Trigger: GGATCCAAGGAACCATGACTTATCAGGGGCCGGCCAGGGCCGTACACAGCATCCCACCCACTGATCAATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS CAA 72 bp CCCCGTCATCTGGCTCAGAGGCACACGTTGATTTGCTaGGAGAGCTCTCTCTCCAGATCCAGGATGAGGGCG +
Preference number: 6 (lower is better)
Translates to: PRHLAQRHTLIC*ESSLSRSRMRA
Trigger: CGCCCTCATCCTGGATCTGGAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAGCCAGATGACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CAA 90 bp AGATCCAGGATGAGGGCGTCGAAGTCTTTGAGATTCAGGTGCGGGTaGAAGGGCGCATCGAAGTCGTCTTCGAAGTCACCGGTGACCCTC +
Preference number: 6 (lower is better)
Translates to: RSRMRASKSLRFRCG*KGASKSSSKSPVTL
Trigger: GAGGGTCACCGGTGACTTCGAAGACGACTTCGATGCGCCCTTCAACCCGCACCTGAATCTCAAAGACTTCGACGCCCTCATCCTGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CAA 90 bp GATGCTGTGTACGGCCCTGGCCGGCCCCTGATAAGTCATGGTTCCTaGGATCCTGCTGTTTTGTTTGGAATAGGCAGCCACAGGCTAGCG +
Preference number: 6 (lower is better)
Translates to: DAVYGPGRPLISHGS*DPAVLFGIGSHRLA
Trigger: CGCTAGCCTGTGGCTGCCTATTCCAAACAAAACAGCAGGATCCAAGGAACCATGACTTATCAGGGGCCGGCCAGGGCCGTACACAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS TCA 72 bp CTCAAAGGCATCCCGAAGCTCTTTCTTCACTGCCGCTaGGCCACAAAGACGGTACAGTCCCACTACCCGCAG +
Preference number: 6 (lower is better)
Translates to: LKGIPKLFLHCR*ATKTVQSHYPQ
Trigger: CTGCGGGTAGTGGGACTGTACCGTCTTTGTGGCTCAGCGGCAGTGAAGAAAGAGCTTCGGGATGCCTTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
ENST00000602203.1
CDS GCA 72 bp CCACCCCGTCATCTGGCTCAGAGGCACACGTTGATTTaGTTGGAGAGCTCTCTCTCCAGATCCAGGATGAGG +
Preference number: 6 (lower is better)
Translates to: PPRHLAQRHTLI*LESSLSRSRMR
Trigger: CCTCATCCTGGATCTGGAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAGCCAGATGACGGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CAA 72 bp CCCACCCCGTCATCTGGCTCAGAGGCACACGTTGATTaGCTTGGAGAGCTCTCTCTCCAGATCCAGGATGAG +
Preference number: 6 (lower is better)
Translates to: PTPSSGSEAHVD*LGELSLQIQDE
Trigger: CTCATCCTGGATCTGGAGAGAGAGCTCTCCAAGCAAATCAACGTGTGCCTCTGAGCCAGATGACGGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CAA 90 bp TTGGAGAGCTCTCTCTCCAGATCCAGGATGAGGGCGTCGAAGTCTTaGAGATTCAGGTGCGGGTTGAAGGGCGCATCGAAGTCGTCTTCG +
Preference number: 6 (lower is better)
Translates to: LESSLSRSRMRASKS*RFRCGLKGASKSSS
Trigger: CGAAGACGACTTCGATGCGCCCTTCAACCCGCACCTGAATCTCAAAGACTTCGACGCCCTCATCCTGGATCTGGAGAGAGAGCTCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS GCA 72 bp TCCAGGATGAGGGCGTCGAAGTCTTTGAGATTCAGGTaGGGGTTGAAGGGCGCATCGAAGTCGTCTTCGAAG +
Preference number: 6 (lower is better)
Translates to: SRMRASKSLRFR*GLKGASKSSSK
Trigger: CTTCGAAGACGACTTCGATGCGCCCTTCAACCCGCACCTGAATCTCAAAGACTTCGACGCCCTCATCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CAA 72 bp ATGAGGGCGTCGAAGTCTTTGAGATTCAGGTGCGGGTaGAAGGGCGCATCGAAGTCGTCTTCGAAGTCACCG +
Preference number: 6 (lower is better)
Translates to: MRASKSLRFRCG*KGASKSSSKSP
Trigger: CGGTGACTTCGAAGACGACTTCGATGCGCCCTTCAACCCGCACCTGAATCTCAAAGACTTCGACGCCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CAA 72 bp TCTCTCTCCAGATCCAGGATGAGGGCGTCGAAGTCTTaGAGATTCAGGTGCGGGTTGAAGGGCGCATCGAAG +
Preference number: 6 (lower is better)
Translates to: SLSRSRMRASKS*RFRCGLKGASK
Trigger: CTTCGATGCGCCCTTCAACCCGCACCTGAATCTCAAAGACTTCGACGCCCTCATCCTGGATCTGGAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS GCA 72 bp TGGCCGGCCCCTGATAAGTCATGGTTCCTTGGATCCTaGTGTTTTGTTTGGAATAGGCAGCCACAGGCTAGC +
Preference number: 6 (lower is better)
Translates to: WPAPDKSWFLGS*CFVWNRQPQAS
Trigger: GCTAGCCTGTGGCTGCCTATTCCAAACAAAACAGCAGGATCCAAGGAACCATGACTTATCAGGGGCCGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS CCA 72 bp TGCTGTGTACGGCCCTGGCCGGCCCCTGATAAGTCATaGTTCCTTGGATCCTGCTGTTTTGTTTGGAATAGG +
Preference number: 6 (lower is better)
Translates to: CCVRPWPAPDKS*FLGSCCFVWNR
Trigger: CCTATTCCAAACAAAACAGCAGGATCCAAGGAACCATGACTTATCAGGGGCCGGCCAGGGCCGTACACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS CAA 90 bp CCTGGCCGGCCCCTGATAAGTCATGGTTCCTTGGATCCTGCTGTTTaGTTTGGAATAGGCAGCCACAGGCTAGCGATCTCAGTTATCAGC +
Preference number: 6 (lower is better)
Translates to: PGRPLISHGSLDPAV*FGIGSHRLAISVIS
Trigger: GCTGATAACTGAGATCGCTAGCCTGTGGCTGCCTATTCCAAACAAAACAGCAGGATCCAAGGAACCATGACTTATCAGGGGCCGGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5
CDS CCA 72 bp CTCCAGTACCACCTTATACAGGGGCTGGGTGATGAGTaGGGTGGGCAACTCTCGAAGATAATCCTTGAGGAT +
Preference number: 6 (lower is better)
Translates to: LQYHLIQGLGDE*GGQLSKIILED
Trigger: ATCCTCAAGGATTATCTTCGAGAGTTGCCCACCCCACTCATCACCCAGCCCCTGTATAAGGTGGTACTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342784.7
ENST00000600252.5
ENST00000600440.5
CDS CAA 72 bp CCCCTGATAAGTCATGGTTCCTTGGATCCTGCTGTTTaGTTTGGAATAGGCAGCCACAGGCTAGCGATCTCA +
Preference number: 6 (lower is better)
Translates to: PLISHGSLDPAV*FGIGSHRLAIS
Trigger: TGAGATCGCTAGCCTGTGGCTGCCTATTCCAAACAAAACAGCAGGATCCAAGGAACCATGACTTATCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600252.5