Pregenerated sensors for SYCP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000198765Ensembl transcript IDs: ENST00000369518.1, ENST00000369522.8, ENST00000455987.5, ENST00000468191.1, ENST00000477590.1, ENST00000482717.5, ENST00000493377.1, ENST00000613524.4, ENST00000618516.4
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGGAATAAACCCTCGTTTCCTTCTCCCTTTCGCCCTACCGCCCGCTaGCACGCTGGCCTGAAAAGAAAGCCCGTTCCCTTCTCCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: RNKPSFPSPFRPTAR*HAGLKRKPVPFSCP Trigger: GGGACAGGAGAAGGGAACGGGCTTTCTTTTCAGGCCAGCGTGGCAGCGGGCGGTAGGGCGAAAGGGAGAAGGAAACGAGGGTTTATTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369518.1 |
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| CDS TCA 90 bp | CGTTTCCTTCTCCCTTTCGCCCTACCGCCCGCTGCCACGCTGGCCTaGAAAGAAAGCCCGTTCCCTTCTCCTGTCCCATTAAATTCCATC | + |
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Preference number: 5 (lower is better) Translates to: RFLLPFALPPAATLA*KESPFPSPVPLNSI Trigger: GATGGAATTTAATGGGACAGGAGAAGGGAACGGGCTTTCTTTTCAGGCCAGCGTGGCAGCGGGCGGTAGGGCGAAAGGGAGAAGGAAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369518.1 |
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| CDS TCA 90 bp | GAAACCGTGGGTTCTGTGCCCACGCGAACTGCTACATACGGTCTATaGGGGCAACAGAAAGAACCAATGGCTCCCGCCTCAGAACCTCAG | + |
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Preference number: 5 (lower is better) Translates to: ETVGSVPTRTATYGL*GQQKEPMAPASEPQ Trigger: CTGAGGTTCTGAGGCGGGAGCCATTGGTTCTTTCTGTTGCCCTCATAGACCGTATGTAGCAGTTCGCGTGGGCACAGAACCCACGGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369522.8 ENST00000455987.5 ENST00000613524.4 ENST00000618516.4 |
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| CDS GCA 90 bp | TGGAATCGCCTCCCAGGGTCTGAGGTTTCACCGCAGACACCTGACTaGTGCTTGATCTCGGTGGTACGAACAATGCAAAGGGCTTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: WNRLPGSEVSPQTPD*CLISVVRTMQRAFA Trigger: AGCAAAAGCCCTTTGCATTGTTCGTACCACCGAGATCAAGCAGCAGTCAGGTGTCTGCGGTGAAACCTCAGACCCTGGGAGGCGATTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000455987.5 ENST00000613524.4 ENST00000618516.4 |
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| CDS CCA 90 bp | CGCGAACTGCTACATACGGTCTATGAGGGCAACAGAAAGAACCAATaGCTCCCGCCTCAGAACCTCAGAAAAGGCGGGAAATCGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: RELLHTVYEGNRKNQ*LPPQNLRKGGKSLS Trigger: GCTGAGCGATTTCCCGCCTTTTCTGAGGTTCTGAGGCGGGAGCCATTGGTTCTTTCTGTTGCCCTCATAGACCGTATGTAGCAGTTCGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369522.8 ENST00000455987.5 ENST00000613524.4 ENST00000618516.4 |
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| CDS TCA 90 bp | GCCTCCCAGGGTCTGAGGTTTCACCGCAGACACCTGACTGCTGCTTaGTCTCGGTGGTACGAACAATGCAAAGGGCTTTTGCTTTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: ASQGLRFHRRHLTAA*SRWYEQCKGLLLFH Trigger: ATGGAAAAGCAAAAGCCCTTTGCATTGTTCGTACCACCGAGATCAAGCAGCAGTCAGGTGTCTGCGGTGAAACCTCAGACCCTGGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000455987.5 ENST00000613524.4 ENST00000618516.4 |
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| CDS GCA 90 bp | TTTGAAGAACTAGCGGGAAACCGTGGGTTCTGTGCCCACGCGAACTaGTACATACGGTCTATGAGGGCAACAGAAAGAACCAATGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: FEELAGNRGFCAHAN*YIRSMRATERTNGS Trigger: GGAGCCATTGGTTCTTTCTGTTGCCCTCATAGACCGTATGTAGCAGTTCGCGTGGGCACAGAACCCACGGTTTCCCGCTAGTTCTTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000369522.8 ENST00000455987.5 ENST00000613524.4 ENST00000618516.4 |
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| CDS GCA 90 bp | AATCGCCTCCCAGGGTCTGAGGTTTCACCGCAGACACCTGACTGCTaGTTGATCTCGGTGGTACGAACAATGCAAAGGGCTTTTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: NRLPGSEVSPQTPDC*LISVVRTMQRAFAF Trigger: AAAAGCAAAAGCCCTTTGCATTGTTCGTACCACCGAGATCAAGCAGCAGTCAGGTGTCTGCGGTGAAACCTCAGACCCTGGGAGGCGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000455987.5 ENST00000613524.4 ENST00000618516.4 |
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| CDS GCA 90 bp | ATTGCAGCACTATTTACAACAGCAAAGACTTGGAACCAACCCAAATaGCCATCAATGACAGACTGGATAAAGAAAATGTGGCACATATAC | + |
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Preference number: 5 (lower is better) Translates to: IAALFTTAKTWNQPK*PSMTDWIKKMWHIY Trigger: GTATATGTGCCACATTTTCTTTATCCAGTCTGTCATTGATGGGCATTTGGGTTGGTTCCAAGTCTTTGCTGTTGTAAATAGTGCTGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468191.1 |
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| CDS GCA 90 bp | ACACCATGGAATATACACTCTTGTAAGAGTAGAGACTTTGTTCACTaGTGTTTTTCATCAGCATCTAGAAGATTTCATGACATAGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: TPWNIHSCKSRDFVH*CFSSASRRFHDIAG Trigger: GCCTGCTATGTCATGAAATCTTCTAGATGCTGATGAAAAACAGCAGTGAACAAAGTCTCTACTCTTACAAGAGTGTATATTCCATGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468191.1 |
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| CDS TCA 72 bp | GGTTCTGTGCCCACGCGAACTGCTACATACGGTCTATaGGGGCAACAGAAAGAACCAATGGCTCCCGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GSVPTRTATYGL*GQQKEPMAPAS Trigger: TGAGGCGGGAGCCATTGGTTCTTTCTGTTGCCCTCATAGACCGTATGTAGCAGTTCGCGTGGGCACAGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369522.8 ENST00000455987.5 ENST00000613524.4 ENST00000618516.4 |
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| CDS GCA 72 bp | CTAGCGGGAAACCGTGGGTTCTGTGCCCACGCGAACTaGTACATACGGTCTATGAGGGCAACAGAAAGAACC | + |
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Preference number: 6 (lower is better) Translates to: LAGNRGFCAHAN*YIRSMRATERT Trigger: GGTTCTTTCTGTTGCCCTCATAGACCGTATGTAGCAGTTCGCGTGGGCACAGAACCCACGGTTTCCCGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000369522.8 ENST00000455987.5 ENST00000613524.4 ENST00000618516.4 |
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| CDS GCA 72 bp | CCAGGGTCTGAGGTTTCACCGCAGACACCTGACTGCTaGTTGATCTCGGTGGTACGAACAATGCAAAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PGSEVSPQTPDC*LISVVRTMQRA Trigger: AGCCCTTTGCATTGTTCGTACCACCGAGATCAAGCAGCAGTCAGGTGTCTGCGGTGAAACCTCAGACCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000455987.5 ENST00000613524.4 ENST00000618516.4 |
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| CDS GCA 72 bp | CTCCCAGGGTCTGAGGTTTCACCGCAGACACCTGACTaGTGCTTGATCTCGGTGGTACGAACAATGCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: LPGSEVSPQTPD*CLISVVRTMQR Trigger: CCTTTGCATTGTTCGTACCACCGAGATCAAGCAGCAGTCAGGTGTCTGCGGTGAAACCTCAGACCCTGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000455987.5 ENST00000613524.4 ENST00000618516.4 |
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| CDS CAA 90 bp | CGCCTCCCAGGGTCTGAGGTTTCACCGCAGACACCTGACTGCTGCTaGATCTCGGTGGTACGAACAATGCAAAGGGCTTTTGCTTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: RLPGSEVSPQTPDCC*ISVVRTMQRAFAFP Trigger: TGGAAAAGCAAAAGCCCTTTGCATTGTTCGTACCACCGAGATCAAGCAGCAGTCAGGTGTCTGCGGTGAAACCTCAGACCCTGGGAGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000455987.5 ENST00000613524.4 ENST00000618516.4 |
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| CDS TCA 72 bp | GGTCTGAGGTTTCACCGCAGACACCTGACTGCTGCTTaGTCTCGGTGGTACGAACAATGCAAAGGGCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: GLRFHRRHLTAA*SRWYEQCKGLL Trigger: CAAAAGCCCTTTGCATTGTTCGTACCACCGAGATCAAGCAGCAGTCAGGTGTCTGCGGTGAAACCTCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000455987.5 ENST00000613524.4 ENST00000618516.4 |
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| CDS CAA 72 bp | GGGTCTGAGGTTTCACCGCAGACACCTGACTGCTGCTaGATCTCGGTGGTACGAACAATGCAAAGGGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: GSEVSPQTPDCC*ISVVRTMQRAF Trigger: AAAAGCCCTTTGCATTGTTCGTACCACCGAGATCAAGCAGCAGTCAGGTGTCTGCGGTGAAACCTCAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000455987.5 ENST00000613524.4 ENST00000618516.4 |
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| CDS CCA 72 bp | ACCATACACATAGTGAAAGTAATCAAACTGCCCAAATaGAGCTGTGGAAAGAACTATGAGCTTCCCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: TIHIVKVIKLPK*SCGKNYELPPG Trigger: GCCAGGGGGAAGCTCATAGTTCTTTCCACAGCTCCATTTGGGCAGTTTGATTACTTTCACTATGTGTATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000493377.1 |
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| CDS GCA 72 bp | CTATTTACAACAGCAAAGACTTGGAACCAACCCAAATaGCCATCAATGACAGACTGGATAAAGAAAATGTGG | + |
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Preference number: 6 (lower is better) Translates to: LFTTAKTWNQPK*PSMTDWIKKMW Trigger: CCACATTTTCTTTATCCAGTCTGTCATTGATGGGCATTTGGGTTGGTTCCAAGTCTTTGCTGTTGTAAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468191.1 |
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| CDS GCA 72 bp | TCTTTTCAGCCTCCTTATACAGTTTTGAATACACTCTaGTCAATCCCTCTGAATTCTCCAAATCAGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SFQPPYTVLNTL*SIPLNSPNQSL Trigger: AAGACTCTGATTTGGAGAATTCAGAGGGATTGAGCAGAGTGTATTCAAAACTGTATAAGGAGGCTGAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000455987.5 ENST00000613524.4 ENST00000618516.4 |
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| CDS CAA 90 bp | TTCTTGAGTTCTAGGGTCATATCACTTGTTTCCTGTGTGAGCTCTTaGTTTTCTAGTGAAAGCTTGTTGCAGTGTGAAGTTAATTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: FLSSRVISLVSCVSS*FSSESLLQCEVNSV Trigger: TACTGAATTAACTTCACACTGCAACAAGCTTTCACTAGAAAACAAAGAGCTCACACAGGAAACAAGTGATATGACCCTAGAACTCAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000455987.5 ENST00000482717.5 ENST00000493377.1 ENST00000613524.4 ENST00000618516.4 |
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| CDS CAA 72 bp | TCCTGTGTGAGCTCTTTGTTTTCTAGTGAAAGCTTGTaGCAGTGTGAAGTTAATTCAGTATTCTTAAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SCVSSLFSSESL*QCEVNSVFLSF Trigger: GAAGCTTAAGAATACTGAATTAACTTCACACTGCAACAAGCTTTCACTAGAAAACAAAGAGCTCACACAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000455987.5 ENST00000482717.5 ENST00000493377.1 ENST00000613524.4 ENST00000618516.4 |
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| CDS CAA 72 bp | AGTTGCTTCTTAACAGACAAAAGTTCAGCTTTGAGATaGGATAGTTCAATCTCCAAAGATGCTCTCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: SCFLTDKSSALR*DSSISKDALSD Trigger: ATCACTGAGAGCATCTTTGGAGATTGAACTATCCAATCTCAAAGCTGAACTTTTGTCTGTTAAGAAGCAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000455987.5 ENST00000618516.4 |
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| CDS CAA 72 bp | CACCATGGAATATACACTCTTGTAAGAGTAGAGACTTaGTTCACTGCTGTTTTTCATCAGCATCTAGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: HHGIYTLVRVET*FTAVFHQHLED Trigger: ATCTTCTAGATGCTGATGAAAAACAGCAGTGAACAAAGTCTCTACTCTTACAAGAGTGTATATTCCATGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468191.1 |
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| CDS CAA 90 bp | TCACTTGTTTCCTGTGTGAGCTCTTTGTTTTCTAGTGAAAGCTTGTaGCAGTGTGAAGTTAATTCAGTATTCTTAAGCTTCTCGTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SLVSCVSSLFSSESL*QCEVNSVFLSFSFS Trigger: TGAAAACGAGAAGCTTAAGAATACTGAATTAACTTCACACTGCAACAAGCTTTCACTAGAAAACAAAGAGCTCACACAGGAAACAAGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000455987.5 ENST00000482717.5 ENST00000493377.1 ENST00000613524.4 ENST00000618516.4 |
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| CDS CAA 90 bp | GCACATATACACCATGGAATATACACTCTTGTAAGAGTAGAGACTTaGTTCACTGCTGTTTTTCATCAGCATCTAGAAGATTTCATGACA | + |
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Preference number: 6 (lower is better) Translates to: AHIHHGIYTLVRVET*FTAVFHQHLEDFMT Trigger: TGTCATGAAATCTTCTAGATGCTGATGAAAAACAGCAGTGAACAAAGTCTCTACTCTTACAAGAGTGTATATTCCATGGTGTATATGTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468191.1 |
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| CDS CAA 90 bp | GCAGGCAATTTCTTTGTCTTTTCTGCAGATCTAGCACAGGTTTCTTaGAGTAGATTACATAAATGCCTTGTGGCATTATTCTCTTTTATT | + |
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Preference number: 6 (lower is better) Translates to: AGNFFVFSADLAQVS*SRLHKCLVALFSFI Trigger: AATAAAAGAGAATAATGCCACAAGGCATTTATGTAATCTACTCAAAGAAACCTGTGCTAGATCTGCAGAAAAGACAAAGAAATTGCCTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468191.1 |
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| CDS TCA 72 bp | CTCTTTTATCTTTGGATATGCCATGATCAACTGATGTaGAATTTCGAGATACAGTTTGTGAAGGAACTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LFYLWICHDQLM*NFEIQFVKELL Trigger: AAGCAGTTCCTTCACAAACTGTATCTCGAAATTTCACATCAGTTGATCATGGCATATCCAAAGATAAAAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000477590.1 ENST00000613524.4 ENST00000618516.4 |
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| CDS CAA 72 bp | ATTTCAAGTTGCTTCTTAACAGACAAAAGTTCAGCTTaGAGATTGGATAGTTCAATCTCCAAAGATGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: ISSCFLTDKSSA*RLDSSISKDAL Trigger: GAGAGCATCTTTGGAGATTGAACTATCCAATCTCAAAGCTGAACTTTTGTCTGTTAAGAAGCAACTTGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369518.1 ENST00000369522.8 ENST00000455987.5 ENST00000618516.4 |
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| CDS GCA 72 bp | AATATACACTCTTGTAAGAGTAGAGACTTTGTTCACTaGTGTTTTTCATCAGCATCTAGAAGATTTCATGAC | + |
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Preference number: 6 (lower is better) Translates to: NIHSCKSRDFVH*CFSSASRRFHD Trigger: GTCATGAAATCTTCTAGATGCTGATGAAAAACAGCAGTGAACAAAGTCTCTACTCTTACAAGAGTGTATATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468191.1 |
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