Pregenerated sensors for SYCE3 (Homo sapiens)
Ensembl gene IDs: ENSG00000217442Ensembl transcript IDs: ENST00000402753.1, ENST00000406915.4
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTaGCCTCTTCATACGGGCAGAGGGTGGCATGGCAGCTGTGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: TVHTAIHVGASSIPQ*PLHTGRGWHGSCGG Trigger: CCCACCACAGCTGCCATGCCACCCTCTGCCCGTATGAAGAGGTCACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| 3UTR-3UTR CCA 90 bp | AACAAGTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTGCATACGGGCAGAGGGTaGCATGGCAGCTGTGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: NKYSAYSYSCGCQLHPPVHTGRG*HGSCGG Trigger: CCCACCACAGCTGCCATGCCACCCTCTGCCCGTATG...CACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTACTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| 3UTR TCA 72 bp | ACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTaGCCTCTTCATACGGGCAGAGGGTGGCATGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: TAIHVGASSIPQ*PLHTGRGWHGS Trigger: GCTGCCATGCCACCCTCTGCCCGTATGAAGAGGTCACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR CCA 90 bp | AGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTGACCTCTTCAGTGGCATGGCAGCTGTaGTGGGCCAGTGGGGCCTAC | + |
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Preference number: 4 (lower is better) Translates to: SAYSYSCGCQLHPPVTSSVAWQL*WASGAY Trigger: GTAGGCCCCACTGGCCCACCACAGCTGCCATGCCAC...TGAAGAGGTCACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR CCA 90 bp | TACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTGACCTCTCATACGGGCAGAGGGTaGCATGGCAGCTGTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: YSAYSYSCGCQLHPPVTSHTGRG*HGSCGG Trigger: CCCACCACAGCTGCCATGCCACCCTCTGCCCGTATG...AGAGGTCACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR TCA 90 bp | GTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTGACCTCTCTCCTCCTTGCAGTTaGCGAAGGCATCCTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VQCIQLFMWVPAPSPSDLSPPCS*RRHPPA Trigger: GGCTGGAGGATGCCTTCGTCAACTGCAAGGAGGAGA...GAGGTCACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR CCA 90 bp | AAGTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTGACCGCTGTGGTGGGCCAGTaGGGCCTACAGCCTTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: KYSAYSYSCGCQLHPPVTAVVGQ*GLQPLL Trigger: AAGCAAAGGCTGTAGGCCCCACTGGCCCACCACAGC...GGTCACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR TCA 90 bp | AGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTGACCTCTTCAAGCTCCATCCCCCAGTaGCCTCTTCATACGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SAYSYSCGCQLHPPVTSSSSIPQ*PLHTGR Trigger: TCTGCCCGTATGAAGAGGTCACTGGGGGATGGAGCT...TGAAGAGGTCACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR GCA 90 bp | AACAAGTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTGGGGGCCTACAGCCTTTaGTTGGTCTCATGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: NKYSAYSYSCGCQLHPPVGAYSL*LVSCSS Trigger: GCTGCTGCATGAGACCAAGCAAAGGCTGTAGGCCCC...CACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTACTTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR GCA 90 bp | GTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTGACCTCTCATGCAGCAGCTCTTaGCAGTTCTTCTCCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: VQCIQLFMWVPAPSPSDLSCSSS*QFFSIS Trigger: GGAGATGGAGAAGAACTGGCAAGAGCTGCTGCATGA...GAGGTCACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR CCA 90 bp | AACAAGTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTGATACAGCTATTCATGTaGGTGCCAGCTCCATCCCCC | + |
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Preference number: 4 (lower is better) Translates to: NKYSAYSYSCGCQLHPPVIQLFM*VPAPSP Trigger: GGGGGATGGAGCTGGCACCCACATGAATAGCTGTAT...CACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTACTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR GCA 90 bp | AAGAAACAAGTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCCTTTGCTTGGTCTCATaGAGCAGCTCTTGCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: KKQVQCIQLFMWVPAPSPLCLVS*SSSCQF Trigger: GAACTGGCAAGAGCTGCTGCATGAGACCAAGCAAAG...GGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTACTTGTTTCTT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR GCA 90 bp | TTAAGAAACAAGTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCAGCTATTCATGTGGGTaGCAGCTCCATCCCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LRNKYSAYSYSCGCQLHPSYSCG*QLHPPV Trigger: CACTGGGGGATGGAGCTGGCACCCACATGAATAGCT...GGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTACTTGTTTCTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR TCA 90 bp | AAGTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTGACCGTCCTTATTCAGATCTaGCAGCATTTTCAGCATGTT | + |
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Preference number: 4 (lower is better) Translates to: KYSAYSYSCGCQLHPPVTVLIQI*QHFQHV Trigger: AACATGCTGAAAATGCTGTCAGATCTGAATAAGGAC...GGTCACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR CCA 90 bp | TTAAGAAACAAGTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCTACAGCCTTTGCTTaGTCTCATGCAGCAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LRNKYSAYSYSCGCQLHPPTAFA*SHAAAL Trigger: AAGAGCTGCTGCATGAGACCAAGCAAAGGCTGTAGG...GGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTACTTGTTTCTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR GCA 90 bp | TTAAGAAACAAGTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCAAGAAACAAGTACAGTaGATACAGCTATTCATGTGG | + |
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Preference number: 4 (lower is better) Translates to: LRNKYSAYSYSCGCQLHPKKQVQ*IQLFMW Trigger: CCACATGAATAGCTGTATGCACTGTACTTGTTTCTT...GGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTACTTGTTTCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS CCA 90 bp | CCCCCAGTGACCTCTTCATACGGGCAGAGGGTGGCATGGCAGCTGTaGTGGGCCAGTGGGGCCTACAGCCTTTGCTTGGTCTCATGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PPVTSSYGQRVAWQL*WASGAYSLCLVSCS Trigger: GCTGCATGAGACCAAGCAAAGGCTGTAGGCCCCACTGGCCCACCACAGCTGCCATGCCACCCTCTGCCCGTATGAAGAGGTCACTGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS CCA 90 bp | CCAGTGACCTCTTCATACGGGCAGAGGGTGGCATGGCAGCTGTGGTaGGCCAGTGGGGCCTACAGCCTTTGCTTGGTCTCATGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PVTSSYGQRVAWQLW*ASGAYSLCLVSCSS Trigger: GCTGCTGCATGAGACCAAGCAAAGGCTGTAGGCCCCACTGGCCCACCACAGCTGCCATGCCACCCTCTGCCCGTATGAAGAGGTCACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS CCA 90 bp | CTCTTCATACGGGCAGAGGGTGGCATGGCAGCTGTGGTGGGCCAGTaGGGCCTACAGCCTTTGCTTGGTCTCATGCAGCAGCTCTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: LFIRAEGGMAAVVGQ*GLQPLLGLMQQLLP Trigger: TGGCAAGAGCTGCTGCATGAGACCAAGCAAAGGCTGTAGGCCCCACTGGCCCACCACAGCTGCCATGCCACCCTCTGCCCGTATGAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS GCA 90 bp | CAGCTGTGGTGGGCCAGTGGGGCCTACAGCCTTTGCTTGGTCTCATaGAGCAGCTCTTGCCAGTTCTTCTCCATCTCCTCCTTGCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: QLWWASGAYSLCLVS*SSSCQFFSISSLQL Trigger: CAACTGCAAGGAGGAGATGGAGAAGAACTGGCAAGAGCTGCTGCATGAGACCAAGCAAAGGCTGTAGGCCCCACTGGCCCACCACAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000402753.1 ENST00000406915.4 |
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| CDS GCA 90 bp | GCCAGTGGGGCCTACAGCCTTTGCTTGGTCTCATGCAGCAGCTCTTaGCAGTTCTTCTCCATCTCCTCCTTGCAGTTGACGAAGGCATCC | + |
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Preference number: 5 (lower is better) Translates to: ASGAYSLCLVSCSSS*QFFSISSLQLTKAS Trigger: GGATGCCTTCGTCAACTGCAAGGAGGAGATGGAGAAGAACTGGCAAGAGCTGCTGCATGAGACCAAGCAAAGGCTGTAGGCCCCACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000402753.1 ENST00000406915.4 |
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| CDS-3UTR CAA 90 bp | AACAAGTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTGTCGGCCAGCGTAGGGTaGGTGCGCATCACCACCATG | + |
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Preference number: 5 (lower is better) Translates to: NKYSAYSYSCGCQLHPPVSASVG*VRITTM Trigger: CATGGTGGTGATGCGCACCAACCCTACGCTGGCCGA...CACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTACTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR CAA 90 bp | GTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTGACCTCTTCTCCATCTCCTCCTaGCAGTTGACGAAGGCATCC | + |
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Preference number: 5 (lower is better) Translates to: VQCIQLFMWVPAPSPSDLFSISS*QLTKAS Trigger: GGATGCCTTCGTCAACTGCAAGGAGGAGATGGAGAA...GAGGTCACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR CAA 90 bp | AACAAGTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCCAGTGATCTCCTCCTTGCAGTaGACGAAGGCATCCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: NKYSAYSYSCGCQLHPPVISSLQ*TKASSS Trigger: GCTGGAGGATGCCTTCGTCAACTGCAAGGAGGAGAT...CACTGGGGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTACTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR CAA 90 bp | TTAAGAAACAAGTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATCCCCTCATGCAGCAGCTCTaGCCAGTTCTTCTCCATCTC | + |
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Preference number: 5 (lower is better) Translates to: LRNKYSAYSYSCGCQLHPLMQQL*PVLLHL Trigger: GAGATGGAGAAGAACTGGCAAGAGCTGCTGCATGAG...GGGATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTACTTGTTTCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS-3UTR CAA 90 bp | TTATTAAGAAACAAGTACAGTGCATACAGCTATTCATGTGGGTGCCAGCTCCATTGGGGCCTACAGCCTTaGCTTGGTCTCATGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LLRNKYSAYSYSCGCQLHWGLQP*LGLMQQ Trigger: CTGCTGCATGAGACCAAGCAAAGGCTGTAGGCCCCA...ATGGAGCTGGCACCCACATGAATAGCTGTATGCACTGTACTTGTTTCTTAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS GCA 72 bp | CATCATCCATCTCCAGCTTGGCCCGCGCTCCGGTCCTaGTCTGGCGCCCCCAGCGGCCGCTTGAGGAACAAG | + |
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Preference number: 6 (lower is better) Translates to: HHPSPAWPALRS*SGAPSGRLRNK Trigger: CTTGTTCCTCAAGCGGCCGCTGGGGGCGCCAGAGCAGGACCGGAGCGCGGGCCAAGCTGGAGATGGATGATG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS CCA 72 bp | ACCTCTTCATACGGGCAGAGGGTGGCATGGCAGCTGTaGTGGGCCAGTGGGGCCTACAGCCTTTGCTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: TSSYGQRVAWQL*WASGAYSLCLV Trigger: GACCAAGCAAAGGCTGTAGGCCCCACTGGCCCACCACAGCTGCCATGCCACCCTCTGCCCGTATGAAGAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406915.4 |
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| CDS CAA 72 bp | CAGCTGTGGTGGGCCAGTGGGGCCTACAGCCTTTGCTaGGTCTCATGCAGCAGCTCTTGCCAGTTCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QLWWASGAYSLC*VSCSSSCQFFS Trigger: GGAGAAGAACTGGCAAGAGCTGCTGCATGAGACCAAGCAAAGGCTGTAGGCCCCACTGGCCCACCACAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000402753.1 ENST00000406915.4 |
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