Pregenerated sensors for SYCE1L (Homo sapiens)
Ensembl gene IDs: ENSG00000205078Ensembl transcript IDs: ENST00000378644.5, ENST00000563157.1, ENST00000568925.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTTGGCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGGTCCTGCTaGCCTAGAGGGCGTCAGGGGCAGCCACCGGCGGCTCGGGATCCT | + |
|
Preference number: 1 (lower is better) Translates to: FLAGLEGRSGTGGSC*PRGRQGQPPAARDP Trigger: AGGATCCCGAGCCGCCGGTGGCTGCCCCTGACGCCCTCTAGGCCAGCAGGACCCGCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563157.1 |
||
| 3UTR GCA 90 bp | TATTTCTTGGCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGGTCCTaGTGGCCTAGAGGGCGTCAGGGGCAGCCACCGGCGGCTCGGGAT | + |
|
Preference number: 1 (lower is better) Translates to: YFLAGLEGRSGTGGS*WPRGRQGQPPAARD Trigger: ATCCCGAGCCGCCGGTGGCTGCCCCTGACGCCCTCTAGGCCAGCAGGACCCGCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563157.1 |
||
| 3UTR CCA 90 bp | CCGCGGAGAACGCGAGCATGGTCGGAAATCATCGCCTTTATTTCTTaGCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGGTCCTGCTGGC | + |
|
Preference number: 1 (lower is better) Translates to: PRRTRAWSEIIAFIS*RVSREGRERAGPAG Trigger: GCCAGCAGGACCCGCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGATGATTTCCGACCATGCTCGCGTTCTCCGCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| 3UTR CCA 90 bp | GCCCCGCTCCACGGTGTAGCACAGACTCCGCGGAGAACGCGAGCATaGTCGGAAATCATCGCCTTTATTTCTTGGCGGGTCTCGAGGGAA | + |
|
Preference number: 1 (lower is better) Translates to: APLHGVAQTPRRTRA*SEIIAFISWRVSRE Trigger: TTCCCTCGAGACCCGCCAAGAAATAAAGGCGATGATTTCCGACCATGCTCGCGTTCTCCGCGGAGTCTGTGCTACACCGTGGAGCGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| 3UTR CAA 90 bp | TCCGCGGAGAACGCGAGCATGGTCGGAAATCATCGCCTTTATTTCTaGGCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGGTCCTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SAENASMVGNHRLYF*AGLEGRSGTGGSCW Trigger: CCAGCAGGACCCGCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGATGATTTCCGACCATGCTCGCGTTCTCCGCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| 3UTR-3UTR CCA 90 bp | CGCCCCGCTCCACGGTGTAGCACAGACTCCGCGGAGAACGCGAGCATGGTCGGAATCGCCTTTATTTCTTaGCGGGTCTCGAGGGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RPAPRCSTDSAENASMVGIAFIS*RVSREG Trigger: ACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGAT...TCCGACCATGCTCGCGTTCTCCGCGGAGTCTGTGCTACACCGTGGAGCGGGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| 3UTR-3UTR CCA 90 bp | ATCGCCTTTATTTCTTGGCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGGTCCTATCGCCTTTATTTCTTaGCGGGTCTCGAGGGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: IAFISWRVSREGRERAGPIAFIS*RVSREG Trigger: ACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGAT...AGGACCCGCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378644.5 ENST00000563157.1 |
||
| 3UTR CCA 72 bp | GGTCTCGAGGGAAGGTCGGGAACGGGCGGGTCCTGCTaGCCTAGAGGGCGTCAGGGGCAGCCACCGGCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GLEGRSGTGGSC*PRGRQGQPPAA Trigger: AGCCGCCGGTGGCTGCCCCTGACGCCCTCTAGGCCAGCAGGACCCGCCCGTTCCCGACCTTCCCTCGAGACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563157.1 |
||
| 3UTR CCA 72 bp | ACGCGAGCATGGTCGGAAATCATCGCCTTTATTTCTTaGCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TRAWSEIIAFIS*RVSREGRERAG Trigger: ACCCGCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGATGATTTCCGACCATGCTCGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| 3UTR TCA 72 bp | GTGGGGCGGGGGATACTGACACCCACTTACTCTCTCTaGGTTCAGGAGCATTTACCCAGCCTCTGTACGGCG | + |
|
Preference number: 3 (lower is better) Translates to: VGRGILTPTYSL*VQEHLPSLCTA Trigger: CGCCGTACAGAGGCTGGGTAAATGCTCCTGAACTCAGAGAGAGTAAGTGGGTGTCAGTATCCCCCGCCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| 3UTR CCA 72 bp | CACGGTGTAGCACAGACTCCGCGGAGAACGCGAGCATaGTCGGAAATCATCGCCTTTATTTCTTGGCGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: HGVAQTPRRTRA*SEIIAFISWRV Trigger: GACCCGCCAAGAAATAAAGGCGATGATTTCCGACCATGCTCGCGTTCTCCGCGGAGTCTGTGCTACACCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR GCA 90 bp | GAGGGAAGGTCGGGAACGGGCGGGTCCTGCTGGCCTAGAGGGCGTCAGGGGCAGAGCTCAGGTCCGGCCTaGCGGGGGCTCTCCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGRSGTGGSCWPRGRQGQSSGPA*RGLSLA Trigger: GGCGAGGGAGAGCCCCCGGCAGGCCGGACCTGAGCT...CTGCCCCTGACGCCCTCTAGGCCAGCAGGACCCGCCCGTTCCCGACCTTCCCTC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563157.1 |
||
| CDS-3UTR CCA 90 bp | CCGCCTCGAGATCCCAGCACGCCCCGCCCCGCTCCACGGTGTAGCACAGACTCCCCGGGGCTCGACTGGTaGGAGGGGTCCGGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPRDPSTPRPAPRCSTDSPGLDW*EGSGRG Trigger: GCCTCTGCCGGACCCCTCCCACCAGTCGAGCCCCGG...GGAGTCTGTGCTACACCGTGGAGCGGGGCGGGGCGTGCTGGGATCTCGAGGCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR GCA 90 bp | GGCTCGACTGGTGGGAGGGGTCCGGCAGAGGCCCCGCCTCGAGATCCCAGCACGGGGGCGCTCCGGACCTaGTCCCCGAATATCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSTGGRGPAEAPPRDPSTGALRT*SPNISS Trigger: GCTGGAGATATTCGGGGAGCAGGTCCGGAGCGCCCC...CGTGCTGGGATCTCGAGGCGGGGCCTCTGCCGGACCCCTCCCACCAGTCGAGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR GCA 90 bp | GCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGGTCCTGCTGGCCTAGAGGGCGTGGAACGGGCGGGTCCTaGTGGCCTAGAGGGCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGLEGRSGTGGSCWPRGRGTGGS*WPRGRQ Trigger: CTGACGCCCTCTAGGCCAGCAGGACCCGCCCGTTCC...ACGCCCTCTAGGCCAGCAGGACCCGCCCGTTCCCGACCTTCCCTCGAGACCCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563157.1 |
||
| CDS-3UTR CCA 90 bp | GTCTCGAGGGAAGGTCGGGAACGGGCGGGTCCTGCTGGCCTAGAGGGCGTCAGGACGGGCGGGTCCTGCTaGCCTAGAGGGCGTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSREGRERAGPAGLEGVRTGGSC*PRGRQG Trigger: CCCCTGACGCCCTCTAGGCCAGCAGGACCCGCCCGT...CCTGACGCCCTCTAGGCCAGCAGGACCCGCCCGTTCCCGACCTTCCCTCGAGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563157.1 |
||
| CDS-3UTR GCA 90 bp | GCATTTACCCAGCCTCTGTACGGCGCCCGGGGCTCGACTGGTGGGAGGGGTCCGGGAACGGGCGGGTCCTaGTGGCCTAGAGGGCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AFTQPLYGARGSTGGRGPGTGGS*WPRGRQ Trigger: CTGACGCCCTCTAGGCCAGCAGGACCCGCCCGTTCC...CGGACCCCTCCCACCAGTCGAGCCCCGGGCGCCGTACAGAGGCTGGGTAAATGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR GCA 90 bp | CGCCCCGCTCCACGGTGTAGCACAGACTCCGCGGAGAACGCGAGCATGGTCGGATTCCAACGCGGGGCCTaGGCGCGAGCCTCGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RPAPRCSTDSAENASMVGFQRGA*ARASLD Trigger: ATCAAGCGAGGCTCGCGCGCAGGCCCCGCGTTGGAA...TCCGACCATGCTCGCGTTCTCCGCGGAGTCTGTGCTACACCGTGGAGCGGGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CCA 90 bp | GGCTCGACTGGTGGGAGGGGTCCGGCAGAGGCCCCGCCTCGAGATCCCAGCACGCAGGTCCTCTATCTGTaGCTCCAGGCTTCCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSTGGRGPAEAPPRDPSTQVLYL*LQASLF Trigger: AAAGAGGGAAGCCTGGAGCCACAGATAGAGGACCTG...CGTGCTGGGATCTCGAGGCGGGGCCTCTGCCGGACCCCTCCCACCAGTCGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR TCA 90 bp | CGCCTCGAGATCCCAGCACGCCCCGCCCCGCTCCACGGTGTAGCACAGACTCCGCTGACATCCAACCTCTaGGCCTCGCTTTCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLEIPARPAPLHGVAQTPLTSNL*ASLSFS Trigger: AGAGAAGGAAAGCGAGGCTCAGAGGTTGGATGTCAG...CGGAGTCTGTGCTACACCGTGGAGCGGGGCGGGGCGTGCTGGGATCTCGAGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR GCA 90 bp | CGCCTCGAGATCCCAGCACGCCCCGCCCCGCTCCACGGTGTAGCACAGACTCCGTCCTTCTCTTGGCAGTaGATCTGGAGGATCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLEIPARPAPLHGVAQTPSFSWQ*IWRILS Trigger: ACTGAGGATCCTCCAGATGCACTGCCAAGAGAAGGA...CGGAGTCTGTGCTACACCGTGGAGCGGGGCGGGGCGTGCTGGGATCTCGAGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR GCA 90 bp | TTTATTTCTTGGCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGGTCCTGCTGGCTCCCGGGCCAGTCGCTaGTCCAGCATGTGGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FISWRVSREGRERAGPAGSRASR*SSMWNS Trigger: GGAATTCCACATGCTGGAGCAGCGACTGGCCCGGGA...GCCAGCAGGACCCGCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR GCA 90 bp | GACTCCGCGGAGAACGCGAGCATGGTCGGAAATCATCGCCTTTATTTCTTGGCGACCTCAGGCGGCGAGTaGAGCCGCCGCTCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSAENASMVGNHRLYFLATSGGE*SRRSTS Trigger: GGAGGTGGAGCGGCGGCTGCACTCGCCGCCTGAGGT...CGCCAAGAAATAAAGGCGATGATTTCCGACCATGCTCGCGTTCTCCGCGGAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CCA 90 bp | ATGGTCGGAAATCATCGCCTTTATTTCTTGGCGGGTCTCGAGGGAAGGTCGGGACGCCCGGGGCTCGACTaGTGGGAGGGGTCCGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MVGNHRLYFLAGLEGRSGRPGLD*WEGSGR Trigger: TCTGCCGGACCCCTCCCACCAGTCGAGCCCCGGGCG...TCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGATGATTTCCGACCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR TCA 90 bp | CAGGAGCATTTACCCAGCCTCTGTACGGCGCCCGGGGCTCGACTGGTGGGAGGGCCCACTTACTCTCTCTaGGTTCAGGAGCATTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: QEHLPSLCTAPGARLVGGPTYSL*VQEHLP Trigger: GGGTAAATGCTCCTGAACTCAGAGAGAGTAAGTGGG...CCCTCCCACCAGTCGAGCCCCGGGCGCCGTACAGAGGCTGGGTAAATGCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CCA 90 bp | GGAGAACGCGAGCATGGTCGGAAATCATCGCCTTTATTTCTTGGCGGGTCTCGACCACCTCCCGCAGCTTaGCGCGCACCAGCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GEREHGRKSSPLFLGGSRPPPAA*RAPASS Trigger: AGAGGAGGCTGGTGCGCGCCAAGCTGCGGGAGGTGG...TCGAGACCCGCCAAGAAATAAAGGCGATGATTTCCGACCATGCTCGCGTTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CCA 90 bp | ACAGACTCCGCGGAGAACGCGAGCATGGTCGGAAATCATCGCCTTTATTTCTTGACGGGCGGGTCCTGCTaGCCTAGAGGGCGTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TDSAENASMVGNHRLYFLTGGSC*PRGRQG Trigger: CCCCTGACGCCCTCTAGGCCAGCAGGACCCGCCCGT...CAAGAAATAAAGGCGATGATTTCCGACCATGCTCGCGTTCTCCGCGGAGTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| 3UTR CAA 72 bp | AACGCGAGCATGGTCGGAAATCATCGCCTTTATTTCTaGGCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NASMVGNHRLYF*AGLEGRSGTGG Trigger: CCCGCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGATGATTTCCGACCATGCTCGCGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR TCA 90 bp | GTCGGAAATCATCGCCTTTATTTCTTGGCGGGTCTCGAGGGAAGGTCGGGAACGTTTGGGAACTCGAGATaGGGCCGTGGGGCGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGNHRLYFLAGLEGRSGTFGNSR*GRGAGD Trigger: ATCCCCCGCCCCACGGCCTCATCTCGAGTTCCCAAA...CGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGATGATTTCCGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CCA 90 bp | GAGTTCAGGAGCATTTACCCAGCCTCTGTACGGCGCCCGGGGCTCGACTGGTGGCAGTCTTCAAAGACTTaGCTTGCCCTTCAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EFRSIYPASVRRPGLDWWQSSKT*LALQPP Trigger: AGGAGGCTGAAGGGCAAGCCAAGTCTTTGAAGACTG...CCACCAGTCGAGCCCCGGGCGCCGTACAGAGGCTGGGTAAATGCTCCTGAACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CCA 90 bp | CCCGCTCCACGGTGTAGCACAGACTCCGCGGAGAACGCGAGCATGGTCGGAAATTCTTGGCAGTGCATCTaGAGGATCCTCAGTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PAPRCSTDSAENASMVGNSWQCI*RILSAS Trigger: AGAGGCACTGAGGATCCTCCAGATGCACTGCCAAGA...ATTTCCGACCATGCTCGCGTTCTCCGCGGAGTCTGTGCTACACCGTGGAGCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CCA 90 bp | CACGGTGTAGCACAGACTCCGCGGAGAACGCGAGCATGGTCGGAAATCATCGCCCGCTGCTCCAGCATGTaGAATTCCCAGAGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HGVAQTPRRTRAWSEIIARCSSM*NSQRSL Trigger: CAAGGACCTCTGGGAATTCCACATGCTGGAGCAGCG...GGCGATGATTTCCGACCATGCTCGCGTTCTCCGCGGAGTCTGTGCTACACCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CCA 90 bp | ATGGTCGGAAATCATCGCCTTTATTTCTTGGCGGGTCTCGAGGGAAGGTCGGGACGTCATTCACCGCCATaGCGCCCTCGACCTCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MVGNHRLYFLAGLEGRSGRHSPP*RPRPQA Trigger: CGCCTGAGGTCGAGGGCGCCATGGCGGTGAATGACG...TCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGATGATTTCCGACCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CCA 90 bp | GCTCCACGGTGTAGCACAGACTCCGCGGAGAACGCGAGCATGGTCGGAAATCATGCCTCCCAGAGACTGTaGGTCTCTCTCAGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: APRCSTDSAENASMVGNHASQRL*VSLSSS Trigger: TGAGGAACTGAGAGAGACCCACAGTCTCTGGGAGGC...ATGATTTCCGACCATGCTCGCGTTCTCCGCGGAGTCTGTGCTACACCGTGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTCTTGGCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGGTCCTGCTGGATCGCCTTTATTTCTTaGCGGGTCTCGAGGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYFLAGLEGRSGTGGSCWIAFIS*RVSREG Trigger: ACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGAT...CCAGCAGGACCCGCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378644.5 ENST00000563157.1 |
||
| CDS-3UTR CCA 90 bp | AATCATCGCCTTTATTTCTTGGCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGGCGGAGAACGCGAGCATaGTCGGAAATCATCGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NHRLYFLAGLEGRSGTGGRRTRA*SEIIAF Trigger: AAAGGCGATGATTTCCGACCATGCTCGCGTTCTCCG...CCCGCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGATGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR TCA 90 bp | GTAGCACAGACTCCGCGGAGAACGCGAGCATGGTCGGAAATCATCGCCTTTATTCCTCCAGCTGTCCTCTaGCATCCAACCTCTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VAQTPRRTRAWSEIIAFIPPAVL*HPTSEP Trigger: AGGCTCAGAGGTTGGATGTCAGAGGACAGCTGGAGG...AATAAAGGCGATGATTTCCGACCATGCTCGCGTTCTCCGCGGAGTCTGTGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CCA 90 bp | AATCATCGCCTTTATTTCTTGGCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGGATCGCCTTTATTTCTTaGCGGGTCTCGAGGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NHRLYFLAGLEGRSGTGGIAFIS*RVSREG Trigger: ACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGAT...CCCGCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGATGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378644.5 ENST00000563157.1 |
||
| CDS-3UTR TCA 90 bp | TTTATTTCTTGGCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGGTCCTGCTGGCTTCTTCTTTGCTTGCTaGAGATCATTAATCCGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FISWRVSREGRERAGPAGFFFAC*RSLIRL Trigger: TAGCCGGATTAATGATCTTCAGCAAGCAAAGAAGAA...GCCAGCAGGACCCGCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR TCA 90 bp | GATACTGACACCCACTTACTCTCTCTGAGTTCAGGAGCATTTACCCAGCCTCTGTGGGGCGGGGGATACTaGCACCCACTTACTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DTDTHLLSLSSGAFTQPLWGGGY*HPLTLS Trigger: AGAGAGAGTAAGTGGGTGTCAGTATCCCCCGCCCCA...CAGAGGCTGGGTAAATGCTCCTGAACTCAGAGAGAGTAAGTGGGTGTCAGTATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR GCA 90 bp | CATGGTCGGAAATCATCGCCTTTATTTCTTGGCGGGTCTCGAGGGAAGGTCGGGAGGCTTCCCTCTTTCTaGAGCTTTATCACCATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HGRKSSPLFLGGSRGKVGRLPSF*SFITIA Trigger: GGCAATGGTGATAAAGCTGCAGAAAGAGGGAAGCCT...CCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGATGATTTCCGACCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR GCA 90 bp | GTAGCACAGACTCCGCGGAGAACGCGAGCATGGTCGGAAATCATCGCCTTTATTATCCTCAGTGCCTCTTaGTTTTTGCCCAAGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VAQTPRRTRAWSEIIAFIILSAS*FLPKTS Trigger: GGAGGTCTTGGGCAAAAAGCAAGAGGCACTGAGGAT...AATAAAGGCGATGATTTCCGACCATGCTCGCGTTCTCCGCGGAGTCTGTGCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR GCA 90 bp | GGGGATACTGACACCCACTTACTCTCTCTGAGTTCAGGAGCATTTACCCAGCCTTTCAAAGACTTGGCTTaGCCTTCAGCCTCCTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GDTDTHLLSLSSGAFTQPFKDLA*PSASSV Trigger: TACTGAGGAGGCTGAAGGGCAAGCCAAGTCTTTGAA...AGGCTGGGTAAATGCTCCTGAACTCAGAGAGAGTAAGTGGGTGTCAGTATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS GCA 90 bp | AGCCCGTCATTCACCGCCATGGCGCCCTCGACCTCAGGCGGCGAGTaGAGCCGCCGCTCCACCTCCCGCAGCTTGGCGCGCACCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPSFTAMAPSTSGGE*SRRSTSRSLARTSL Trigger: GAGGCTGGTGCGCGCCAAGCTGCGGGAGGTGGAGCGGCGGCTGCACTCGCCGCCTGAGGTCGAGGGCGCCATGGCGGTGAATGACGGGCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CAA 90 bp | ATTTACCCAGCCTCTGTACGGCGCCCGGGGCTCGACTGGTGGGAGGGGTCCGGCTCCACCTCCCGCAGCTaGGCGCGCACCAGCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IYPASVRRPGLDWWEGSGSTSRS*ARTSLL Trigger: GAGGAGGCTGGTGCGCGCCAAGCTGCGGGAGGTGGA...GCCGGACCCCTCCCACCAGTCGAGCCCCGGGCGCCGTACAGAGGCTGGGTAAAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS GCA 90 bp | CGCTCCGGACCTGCTCCCCGAATATCTCCAGCTCCGCCTTCAGCCTaGGGAGAAGGGGCCGAGGAGACAGGAGGAAGAGAGCGAGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSGPAPRISPAPPSA*GEGAEETGGRERES Trigger: GGACTCTCGCTCTCTTCCTCCTGTCTCCTCGGCCCCTTCTCCGCAGGCTGAAGGCGGAGCTGGAGATATTCGGGGAGCAGGTCCGGAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568925.1 |
||
| CDS-3UTR CAA 90 bp | CGCCTCGAGATCCCAGCACGCCCCGCCCCGCTCCACGGTGTAGCACAGACTCCGAGTGCCTCTTGCTTTTaGCCCAAGACCTCCTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLEIPARPAPLHGVAQTPSASCF*PKTSSR Trigger: CCTAGAGGAGGTCTTGGGCAAAAAGCAAGAGGCACT...CGGAGTCTGTGCTACACCGTGGAGCGGGGCGGGGCGTGCTGGGATCTCGAGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CAA 90 bp | AGTTCAGGAGCATTTACCCAGCCTCTGTACGGCGCCCGGGGCTCGACTGGTGGGTCAGTCTTCAAAGACTaGGCTTGCCCTTCAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSGAFTQPLYGARGSTGGSVFKD*ACPSAS Trigger: GGAGGCTGAAGGGCAAGCCAAGTCTTTGAAGACTGA...CCCACCAGTCGAGCCCCGGGCGCCGTACAGAGGCTGGGTAAATGCTCCTGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCTTGGCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGGTCCTGCTGGCATCGCCTTTATTTCTaGGCGGGTCTCGAGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LYFLAGLEGRSGTGGSCWHRLYF*AGLEGR Trigger: CCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGATG...CCAGCAGGACCCGCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378644.5 ENST00000563157.1 |
||
| CDS-3UTR CAA 90 bp | ATCGCCTTTATTTCTTGGCGGGTCTCGAGGGAAGGTCGGGAACGGGCGGGTCCTCTTCAAAGACTTGGCTaGCCCTTCAGCCTCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IAFISWRVSREGRERAGPLQRLG*PFSLLS Trigger: ACTGAGGAGGCTGAAGGGCAAGCCAAGTCTTTGAAG...AGGACCCGCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CAA 90 bp | GGAAATCATCGCCTTTATTTCTTGGCGGGTCTCGAGGGAAGGTCGGGAACGGGCCATCGCCTTTATTTCTaGGCGGGTCTCGAGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GNHRLYFLAGLEGRSGTGHRLYF*AGLEGR Trigger: CCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGATG...GCCCGTTCCCGACCTTCCCTCGAGACCCGCCAAGAAATAAAGGCGATGATTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378644.5 ENST00000563157.1 |
||
| CDS-3UTR CAA 90 bp | GGGGATACTGACACCCACTTACTCTCTCTGAGTTCAGGAGCATTTACCCAGCCTGATCCTCAGTGCCTCTaGCTTTTTGCCCAAGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: GDTDTHLLSLSSGAFTQPDPQCL*LFAQDL Trigger: GAGGTCTTGGGCAAAAAGCAAGAGGCACTGAGGATC...AGGCTGGGTAAATGCTCCTGAACTCAGAGAGAGTAAGTGGGTGTCAGTATCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CAA 90 bp | GGAGAACGCGAGCATGGTCGGAAATCATCGCCTTTATTTCTTGGCGGGTCTCGAGCAGCTTTATCACCATaGCCAGCAAGTCTTCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GEREHGRKSSPLFLGGSRAALSP*PASLQS Trigger: AGACTGAAGACTTGCTGGCAATGGTGATAAAGCTGC...TCGAGACCCGCCAAGAAATAAAGGCGATGATTTCCGACCATGCTCGCGTTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS-3UTR CAA 90 bp | ACAGACTCCGCGGAGAACGCGAGCATGGTCGGAAATCATCGCCTTTATTTCTTGGGATTTCTTCTTTGCTaGCTGAAGATCATTAATCCG | + |
|
Preference number: 5 (lower is better) Translates to: TDSAENASMVGNHRLYFLGFLLC*LKIINP Trigger: CGGATTAATGATCTTCAGCAAGCAAAGAAGAAATCC...CAAGAAATAAAGGCGATGATTTCCGACCATGCTCGCGTTCTCCGCGGAGTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS GCA 72 bp | TTCACCGCCATGGCGCCCTCGACCTCAGGCGGCGAGTaGAGCCGCCGCTCCACCTCCCGCAGCTTGGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: FTAMAPSTSGGE*SRRSTSRSLAR Trigger: GCGCGCCAAGCTGCGGGAGGTGGAGCGGCGGCTGCACTCGCCGCCTGAGGTCGAGGGCGCCATGGCGGTGAA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS CCA 72 bp | GCGGCGAGTGCAGCCGCCGCTCCACCTCCCGCAGCTTaGCGCGCACCAGCCTCCTCTCCGAGAGCAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AASAAAAPPPAA*RAPASSPRAAA Trigger: AGCAGCTGCTCTCGGAGAGGAGGCTGGTGCGCGCCAAGCTGCGGGAGGTGGAGCGGCGGCTGCACTCGCCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS CCA 72 bp | TCTCCAGCTCCGCCTTCAGCCCGTCATTCACCGCCATaGCGCCCTCGACCTCAGGCGGCGAGTGCAGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPAPPSARHSPP*RPRPQAASAAA Trigger: GGCGGCTGCACTCGCCGCCTGAGGTCGAGGGCGCCATGGCGGTGAATGACGGGCTGAAGGCGGAGCTGGAGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||
| CDS GCA 72 bp | TGCACTTTCTCTCCATTCAAGGAGTCTAATTCCCTATaGAGGGCCTCCCAGAGACTGTGGGTCTCTCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CTFSPFKESNSL*RASQRLWVSLS Trigger: ACTGAGAGAGACCCACAGTCTCTGGGAGGCCCTGCATAGGGAATTAGACTCCTTGAATGGAGAGAAAGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378644.5 |
||