RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SVOP (Homo sapiens)

Ensembl gene IDs: ENSG00000166111

Ensembl transcript IDs: ENST00000546618.2, ENST00000548229.2, ENST00000550436.4, ENST00000551211.1, ENST00000610966.5

Found 478 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCTTCGCTGCTTCAGAAGGGGAGGCCCGTGCTCTGACTTCAGCTTaGTTCACTTTGGCCTCAGTCCTCAGTTCCCAGGGGGTAACGGCG +
Preference number: 1 (lower is better)
Translates to: AFAASEGEARALTSA*FTLASVLSSQGVTA
Trigger: CGCCGTTACCCCCTGGGAACTGAGGACTGAGGCCAAAGTGAATCAAGCTGAAGTCAGAGCACGGGCCTCCCCTTCTGAAGCAGCGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 90 bp CTGGGTGGGGGCATGTGGCTCCAGTTTGAATGCACCATGTCCATCTaGCAGAGAATCCACTGGTCAGGCTCTAGGGAGGCAAACCGGGGG +
Preference number: 1 (lower is better)
Translates to: LGGGMWLQFECTMSI*QRIHWSGSREANRG
Trigger: CCCCCGGTTTGCCTCCCTAGAGCCTGACCAGTGGATTCTCTGGCAGATGGACATGGTGCATTCAAACTGGAGCCACATGCCCCCACCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 90 bp GACCAAGGAGGGGGCCAGGAAAGAAGTCGGAACCGTGGCCTTCGCTaGTTCAGAAGGGGAGGCCCGTGCTCTGACTTCAGCTTGATTCAC +
Preference number: 1 (lower is better)
Translates to: DQGGGQERSRNRGLR*FRRGGPCSDFSLIH
Trigger: GTGAATCAAGCTGAAGTCAGAGCACGGGCCTCCCCTTCTGAAGCAGCGAAGGCCACGGTTCCGACTTCTTTCCTGGCCCCCTCCTTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 90 bp GAGGTTGTCACCTGGTGCAAGACCAGCTGTCCCCAGGGACACATCTaGATCTCTTGGTGCCAACAACGGCAACTCCAGAGGGGGCTGGGT +
Preference number: 1 (lower is better)
Translates to: EVVTWCKTSCPQGHI*ISWCQQRQLQRGLG
Trigger: ACCCAGCCCCCTCTGGAGTTGCCGTTGTTGGCACCAAGAGATCCAGATGTGTCCCTGGGGACAGCTGGTCTTGCACCAGGTGACAACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 90 bp TCGGAACCGTGGCCTTCGCTGCTTCAGAAGGGGAGGCCCGTGCTCTaGCTTCAGCTTGATTCACTTTGGCCTCAGTCCTCAGTTCCCAGG +
Preference number: 1 (lower is better)
Translates to: SEPWPSLLQKGRPVL*LQLDSLWPQSSVPR
Trigger: CCTGGGAACTGAGGACTGAGGCCAAAGTGAATCAAGCTGAAGTCAGAGCACGGGCCTCCCCTTCTGAAGCAGCGAAGGCCACGGTTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 90 bp CAACTCCAGAGGGGGCTGGGTGGGGGCATGTGGCTCCAGTTTGAATaGACCATGTCCATCTGCCAGAGAATCCACTGGTCAGGCTCTAGG +
Preference number: 1 (lower is better)
Translates to: QLQRGLGGGMWLQFE*TMSICQRIHWSGSR
Trigger: CCTAGAGCCTGACCAGTGGATTCTCTGGCAGATGGACATGGTGCATTCAAACTGGAGCCACATGCCCCCACCCAGCCCCCTCTGGAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 90 bp TGGTGCCAACAACGGCAACTCCAGAGGGGGCTGGGTGGGGGCATGTaGCTCCAGTTTGAATGCACCATGTCCATCTGCCAGAGAATCCAC +
Preference number: 1 (lower is better)
Translates to: WCQQRQLQRGLGGGM*LQFECTMSICQRIH
Trigger: GTGGATTCTCTGGCAGATGGACATGGTGCATTCAAACTGGAGCCACATGCCCCCACCCAGCCCCCTCTGGAGTTGCCGTTGTTGGCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 90 bp CCTGAGTCCTCCCACCCCTCTCCACTCCACGGCAGGCTCCATGAATaGAACTCCAGGGGCTGCCTTTGTGTAATGATCAAGACGTCCCTG +
Preference number: 1 (lower is better)
Translates to: PESSHPSPLHGRLHE*NSRGCLCVMIKTSL
Trigger: CAGGGACGTCTTGATCATTACACAAAGGCAGCCCCTGGAGTTCCATTCATGGAGCCTGCCGTGGAGTGGAGAGGGGTGGGAGGACTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 90 bp TTCACTTTGGCCTCAGTCCTCAGTTCCCAGGGGGTAACGGCGTTCTaGGGTTGTCACCTGGTGCAAGACCAGCTGTCCCCAGGGACACAT +
Preference number: 1 (lower is better)
Translates to: FTLASVLSSQGVTAF*GCHLVQDQLSPGTH
Trigger: ATGTGTCCCTGGGGACAGCTGGTCTTGCACCAGGTGACAACCTCAGAACGCCGTTACCCCCTGGGAACTGAGGACTGAGGCCAAAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 90 bp CCCTCTCCACTCCACGGCAGGCTCCATGAATGGAACTCCAGGGGCTaGCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCT +
Preference number: 1 (lower is better)
Translates to: PSPLHGRLHEWNSRG*LCVMIKTSLDRGAA
Trigger: AGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCAGCCCCTGGAGTTCCATTCATGGAGCCTGCCGTGGAGTGGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 90 bp TCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTGGTCCCCTaGTCCCCATGGGATGAGATGGTGGGTGTAGCATCCTTCTGGTTT +
Preference number: 1 (lower is better)
Translates to: SLDRGAASHQGILVP*SPWDEMVGVASFWF
Trigger: AAACCAGAAGGATGCTACACCCACCATCTCATCCCATGGGGATCAGGGGACCAGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 90 bp AGAAGTCGGAACCGTGGCCTTCGCTGCTTCAGAAGGGGAGGCCCGTaGTCTGACTTCAGCTTGATTCACTTTGGCCTCAGTCCTCAGTTC +
Preference number: 1 (lower is better)
Translates to: RSRNRGLRCFRRGGP*SDFSLIHFGLSPQF
Trigger: GAACTGAGGACTGAGGCCAAAGTGAATCAAGCTGAAGTCAGAGCACGGGCCTCCCCTTCTGAAGCAGCGAAGGCCACGGTTCCGACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 90 bp AGCAGCTTCGCATCAGGGAATCCTGGTCCCCTGATCCCCATGGGATaGGATGGTGGGTGTAGCATCCTTCTGGTTTCTCTGCCCATTCAG +
Preference number: 1 (lower is better)
Translates to: SSFASGNPGPLIPMG*DGGCSILLVSLPIQ
Trigger: CTGAATGGGCAGAGAAACCAGAAGGATGCTACACCCACCATCTCATCCCATGGGGATCAGGGGACCAGGATTCCCTGATGCGAAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 90 bp GTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTaGAACCATCGCCCATCCAACAGCCATTGCTATCCTTCTTCTGTG +
Preference number: 1 (lower is better)
Translates to: VLMRALWPTHPRQAP*NHRPSNSHCYPSSV
Trigger: CACAGAAGAAGGATAGCAATGGCTGTTGGATGGGCGATGGTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 90 bp GCTCAGACCACACCTAGATCGCCTGCAATTTCAAAGAAGAAAGCCTaGGGCTGTGAGTGTGGGAGAAACCTACTGAACAGGTCCGGTGGG +
Preference number: 1 (lower is better)
Translates to: AQTTPRSPAISKKKA*GCECGRNLLNRSGG
Trigger: CCCACCGGACCTGTTCAGTAGGTTTCTCCCACACTCACAGCCCCAGGCTTTCTTCTTTGAAATTGCAGGCGATCTAGGTGTGGTCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 90 bp CTACTGAACAGGTCCGGTGGGTGGACAGCAGGTGTCACATGGGCCTaGGCCTGGACGGTATCTACAGAGAGATATTTTGGTTGTTCACTG +
Preference number: 1 (lower is better)
Translates to: LLNRSGGWTAGVTWA*AWTVSTERYFGCSL
Trigger: CAGTGAACAACCAAAATATCTCTCTGTAGATACCGTCCAGGCTCAGGCCCATGTGACACCTGCTGTCCACCCACCGGACCTGTTCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 90 bp ACTGGGCCAATCAGCTTCATTCCTGAAGATCTGGGAGTGGGGCACTaGGCAGCTGAGTCAGGTATGTTTGCAGAGCTGGGTTATGAGGCT +
Preference number: 1 (lower is better)
Translates to: TGPISFIPEDLGVGH*AAESGMFAELGYEA
Trigger: AGCCTCATAACCCAGCTCTGCAAACATACCTGACTCAGCTGCTCAGTGCCCCACTCCCAGATCTTCAGGAATGAAGCTGATTGGCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 90 bp TCACTGAGGGTTTGGCCGGGTGACTCTGGGTGGTGTCTGATTGGTTaGTGGCATTACCAGACCCTCCTAATATGGGTAGTCTTCCCATGT +
Preference number: 1 (lower is better)
Translates to: SLRVWPGDSGWCLIG*WHYQTLLIWVVFPC
Trigger: ACATGGGAAGACTACCCATATTAGGAGGGTCTGGTAATGCCAGCAACCAATCAGACACCACCCAGAGTCACCCGGCCAAACCCTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 90 bp TCCCCATGGGATGAGATGGTGGGTGTAGCATCCTTCTGGTTTCTCTaGCCATTCAGCTGTCTACCCATGCACAAAACCCAAAGCCCTGGA +
Preference number: 1 (lower is better)
Translates to: SPWDEMVGVASFWFL*PFSCLPMHKTQSPG
Trigger: TCCAGGGCTTTGGGTTTTGTGCATGGGTAGACAGCTGAATGGGCAGAGAAACCAGAAGGATGCTACACCCACCATCTCATCCCATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 90 bp CTGAGGGTTTGGCCGGGTGACTCTGGGTGGTGTCTGATTGGTTGCTaGCATTACCAGACCCTCCTAATATGGGTAGTCTTCCCATGTAGA +
Preference number: 1 (lower is better)
Translates to: LRVWPGDSGWCLIGC*HYQTLLIWVVFPCR
Trigger: TCTACATGGGAAGACTACCCATATTAGGAGGGTCTGGTAATGCCAGCAACCAATCAGACACCACCCAGAGTCACCCGGCCAAACCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 90 bp CTTGCAATGTTTACTTCAAGCAGTAGGTCTGTCTGCTCTGGCCTTTaGTGGGATCTGCCAGCTTCCTCCCTCCTTGTCTATGTCCCCTGC +
Preference number: 1 (lower is better)
Translates to: LAMFTSSSRSVCSGL*WDLPASSLLVYVPC
Trigger: GCAGGGGACATAGACAAGGAGGGAGGAAGCTGGCAGATCCCATCAAAGGCCAGAGCAGACAGACCTACTGCTTGAAGTAAACATTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 90 bp TTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTaGACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTAC +
Preference number: 1 (lower is better)
Translates to: FMHMSLQIPGIPAIV*TTLLKGRPMPPCLY
Trigger: GTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 90 bp GATCTGCCAAGCCATCTCCTCTTCAACTGCCTGGGCGGAGGGGGCTaGAGCCCACATTTTAGAGACACAGTATTGTTTGCAGTTGATTTA +
Preference number: 1 (lower is better)
Translates to: DLPSHLLFNCLGGGG*SPHFRDTVLFAVDL
Trigger: TAAATCAACTGCAAACAATACTGTGTCTCTAAAATGTGGGCTGCAGCCCCCTCCGCCCAGGCAGTTGAAGAGGAGATGGCTTGGCAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 90 bp AACACTAAACTGGGCCAATCAGCTTCATTCCTGAAGATCTGGGAGTaGGGCACTGAGCAGCTGAGTCAGGTATGTTTGCAGAGCTGGGTT +
Preference number: 1 (lower is better)
Translates to: NTKLGQSASFLKIWE*GTEQLSQVCLQSWV
Trigger: AACCCAGCTCTGCAAACATACCTGACTCAGCTGCTCAGTGCCCCACTCCCAGATCTTCAGGAATGAAGCTGATTGGCCCAGTTTAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 90 bp CAATCCAACACTAAACTGGGCCAATCAGCTTCATTCCTGAAGATCTaGGAGTGGGGCACTGAGCAGCTGAGTCAGGTATGTTTGCAGAGC +
Preference number: 1 (lower is better)
Translates to: QSNTKLGQSASFLKI*EWGTEQLSQVCLQS
Trigger: GCTCTGCAAACATACCTGACTCAGCTGCTCAGTGCCCCACTCCCAGATCTTCAGGAATGAAGCTGATTGGCCCAGTTTAGTGTTGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 90 bp ATCTACAGAGAGATATTTTGGTTGTTCACTGAGGGTTTGGCCGGGTaGCTCTGGGTGGTGTCTGATTGGTTGCTGGCATTACCAGACCCT +
Preference number: 1 (lower is better)
Translates to: IYREIFWLFTEGLAG*LWVVSDWLLALPDP
Trigger: AGGGTCTGGTAATGCCAGCAACCAATCAGACACCACCCAGAGTCACCCGGCCAAACCCTCAGTGAACAACCAAAATATCTCTCTGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 90 bp GGCAGCTGTCTTGGGCCCCAGTGGTTTCCCAGATCCCTGTTCCTCTaGATGACACCAGGCTGTACTTTATTCCTATGCAATCTCTCTAAA +
Preference number: 1 (lower is better)
Translates to: GSCLGPQWFPRSLFL*MTPGCTLFLCNLSK
Trigger: TTTAGAGAGATTGCATAGGAATAAAGTACAGCCTGGTGTCATTCAGAGGAACAGGGATCTGGGAAACCACTGGGGCCCAAGACAGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 90 bp CATCCACGGCAGGCTCCTTGCAACCATCGCCCATCCAACAGCCATTaGTATCCTTCTTCTGTGCTAACAGAATCCCAATTTTGTGTTCAG +
Preference number: 1 (lower is better)
Translates to: HPRQAPCNHRPSNSH*YPSSVLTESQFCVQ
Trigger: CTGAACACAAAATTGGGATTCTGTTAGCACAGAAGAAGGATAGCAATGGCTGTTGGATGGGCGATGGTTGCAAGGAGCCTGCCGTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 90 bp AGATATTTTGGTTGTTCACTGAGGGTTTGGCCGGGTGACTCTGGGTaGTGTCTGATTGGTTGCTGGCATTACCAGACCCTCCTAATATGG +
Preference number: 1 (lower is better)
Translates to: RYFGCSLRVWPGDSG*CLIGCWHYQTLLIW
Trigger: CCATATTAGGAGGGTCTGGTAATGCCAGCAACCAATCAGACACCACCCAGAGTCACCCGGCCAAACCCTCAGTGAACAACCAAAATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 90 bp TGGACGGTATCTACAGAGAGATATTTTGGTTGTTCACTGAGGGTTTaGCCGGGTGACTCTGGGTGGTGTCTGATTGGTTGCTGGCATTAC +
Preference number: 1 (lower is better)
Translates to: WTVSTERYFGCSLRV*PGDSGWCLIGCWHY
Trigger: GTAATGCCAGCAACCAATCAGACACCACCCAGAGTCACCCGGCCAAACCCTCAGTGAACAACCAAAATATCTCTCTGTAGATACCGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 90 bp GCTGTCTTGGGCCCCAGTGGTTTCCCAGATCCCTGTTCCTCTGAATaGCACCAGGCTGTACTTTATTCCTATGCAATCTCTCTAAACTGT +
Preference number: 1 (lower is better)
Translates to: AVLGPSGFPDPCSSE*HQAVLYSYAISLNC
Trigger: ACAGTTTAGAGAGATTGCATAGGAATAAAGTACAGCCTGGTGTCATTCAGAGGAACAGGGATCTGGGAAACCACTGGGGCCCAAGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 90 bp ACCACATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTaGGTGGACCTCAATGAAGATGAGCAAACTGAGTCAAGACACAAA +
Preference number: 1 (lower is better)
Translates to: TTYTENPLEQTSPHP*VDLNEDEQTESRHK
Trigger: TTTGTGTCTTGACTCAGTTTGCTCATCTTCATTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATATGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 90 bp ACCGTGTCTGTACCTCTCCACCACTTCTTCCTGACCCAATTGAATTaGACCAAGACTCAATCCAACACTAAACTGGGCCAATCAGCTTCA +
Preference number: 1 (lower is better)
Translates to: TVSVPLHHFFLTQLN*TKTQSNTKLGQSAS
Trigger: TGAAGCTGATTGGCCCAGTTTAGTGTTGGATTGAGTCTTGGTCCAATTCAATTGGGTCAGGAAGAAGTGGTGGAGAGGTACAGACACGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 90 bp GGGTGGTGTCTGATTGGTTGCTGGCATTACCAGACCCTCCTAATATaGGTAGTCTTCCCATGTAGATCCACAGGTTATGAACAAAGCTTT +
Preference number: 1 (lower is better)
Translates to: GWCLIGCWHYQTLLI*VVFPCRSTGYEQSF
Trigger: AAAGCTTTGTTCATAACCTGTGGATCTACATGGGAAGACTACCCATATTAGGAGGGTCTGGTAATGCCAGCAACCAATCAGACACCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 90 bp ACCATTAGAAGAAAGTGTTGTCTCCAACAAGCTCAGCCACAATGTTaGCTGCCAACGGTATGTCTTTCCCCACTCATTGGAAAGGAGATT +
Preference number: 1 (lower is better)
Translates to: TIRRKCCLQQAQPQC*LPTVCLSPLIGKEI
Trigger: AATCTCCTTTCCAATGAGTGGGGAAAGACATACCGTTGGCAGCCAACATTGTGGCTGAGCTTGTTGGAGACAACACTTTCTTCTAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 90 bp CCAGGCTGTACTTTATTCCTATGCAATCTCTCTAAACTGTCAGAGTaGACCATCAGCCCATCAACCAAAGCTGCACTGCAGATGCATTTT +
Preference number: 1 (lower is better)
Translates to: PGCTLFLCNLSKLSE*TISPSTKAALQMHF
Trigger: AAAATGCATCTGCAGTGCAGCTTTGGTTGATGGGCTGATGGTTCACTCTGACAGTTTAGAGAGATTGCATAGGAATAAAGTACAGCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 90 bp CACCCAGCCAGGACCATGTCTTATGATATTTTGCATCCTCAGTGTTaGATAACATGTCCAGGACATGCTGGATATTCCATGCATACTGAC +
Preference number: 1 (lower is better)
Translates to: HPARTMSYDILHPQC*ITCPGHAGYSMHTD
Trigger: GTCAGTATGCATGGAATATCCAGCATGTCCTGGACATGTTATTCAACACTGAGGATGCAAAATATCATAAGACATGGTCCTGGCTGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 90 bp TTAGAAGAAAGTGTTGTCTCCAACAAGCTCAGCCACAATGTTGGCTaGCAACGGTATGTCTTTCCCCACTCATTGGAAAGGAGATTATCA +
Preference number: 1 (lower is better)
Translates to: LEESVVSNKLSHNVG*QRYVFPHSLERRLS
Trigger: TGATAATCTCCTTTCCAATGAGTGGGGAAAGACATACCGTTGGCAGCCAACATTGTGGCTGAGCTTGTTGGAGACAACACTTTCTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 90 bp ATTTCACAGAAAAACCTAGACTCCTCTTTTGAACATTGTAAGATCTaGTCACACTGGACCCATGGTGGAACAACATCAGCTGGAAGGGAG +
Preference number: 1 (lower is better)
Translates to: ISQKNLDSSFEHCKI*SHWTHGGTTSAGRE
Trigger: CTCCCTTCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTCAAAAGAGGAGTCTAGGTTTTTCTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 90 bp TTCCCCACTCATTGGAAAGGAGATTATCACACTAAAGCATTGAGATaGATTCCGATGAACAAAGGTAGTCAGACCGTTAGGCTGGACTGT +
Preference number: 1 (lower is better)
Translates to: FPTHWKGDYHTKALR*IPMNKGSQTVRLDC
Trigger: ACAGTCCAGCCTAACGGTCTGACTACCTTTGTTCATCGGAATTCATCTCAATGCTTTAGTGTGATAATCTCCTTTCCAATGAGTGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 90 bp GTTATGATCTGTAAGAGAGTTCTGATGAATAGACTTGAGAGTTTATaGACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTGCA +
Preference number: 1 (lower is better)
Translates to: VMICKRVLMNRLESL*TCHCRFQAYQQLSA
Trigger: TGCAGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAGTCTATTCATCAGAACTCTCTTACAGATCATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 90 bp GGCCTTCGCTGCTTCAGAAGGGGAGGCCCGTGCTCTGACTTCAGCTaGATTCACTTTGGCCTCAGTCCTCAGTTCCCAGGGGGTAACGGC +
Preference number: 2 (lower is better)
Translates to: GLRCFRRGGPCSDFS*IHFGLSPQFPGGNG
Trigger: GCCGTTACCCCCTGGGAACTGAGGACTGAGGCCAAAGTGAATCAAGCTGAAGTCAGAGCACGGGCCTCCCCTTCTGAAGCAGCGAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 90 bp AACGGCAACTCCAGAGGGGGCTGGGTGGGGGCATGTGGCTCCAGTTaGAATGCACCATGTCCATCTGCCAGAGAATCCACTGGTCAGGCT +
Preference number: 2 (lower is better)
Translates to: NGNSRGGWVGACGSS*NAPCPSARESTGQA
Trigger: AGCCTGACCAGTGGATTCTCTGGCAGATGGACATGGTGCATTCAAACTGGAGCCACATGCCCCCACCCAGCCCCCTCTGGAGTTGCCGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 90 bp TTTGGCCTCAGTCCTCAGTTCCCAGGGGGTAACGGCGTTCTGAGGTaGTCACCTGGTGCAAGACCAGCTGTCCCCAGGGACACATCTGGA +
Preference number: 2 (lower is better)
Translates to: FGLSPQFPGGNGVLR*SPGARPAVPRDTSG
Trigger: TCCAGATGTGTCCCTGGGGACAGCTGGTCTTGCACCAGGTGACAACCTCAGAACGCCGTTACCCCCTGGGAACTGAGGACTGAGGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACAGTCACCATTCAGCCTaGCCAAGGAGGGGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNSHHSA*PRRGPG
Trigger: TCCTGGCCCCCTCCTTGGTCAGGCTGAATGGTGACT...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACATCTCCTCTTCAACTaGCTGGGCGGAGGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: SNCLHHPAKGQANATVSVHLLFN*LGGGGC
Trigger: GCAGCCCCCTCCGCCCAGGCAGTTGAAGAGGAGATG...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp CAGCCAGGACGACCTCGAACACTGTCCCGATGGCCCAGAATACCTCAATCAGCATACAGCGTCACCGACTaGGGAACTCCTCCGATCCCG +
Preference number: 2 (lower is better)
Translates to: QPGRPRTLSRWPRIPQSAYSVTD*GTPPIP
Trigger: CGGGATCGGAGGAGTTCCCCAGTCGGTGACGCTGTA...TGCTGATTGAGGTATTCTGGGCCATCGGGACAGTGTTCGAGGTCGTCCTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550436.4
3UTR-3UTR CCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACGTAATCTCAGCACTGTaGGAGGCCGAGGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNVISAL*EAEAGG
Trigger: TCCACCCGCCTCGGCCTCCCACAGTGCTGAGATTAC...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCGTGGGAGAAACCTACTaGACAGGTCCGGTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLVGETY*TGPVGG
Trigger: TCCACCCACCGGACCTGTTCAGTAGGTTTCTCCCAC...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACGGCAGGCTCCATGAATaGAACTCCAGGGGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNGRLHE*NSRGCL
Trigger: AAGGCAGCCCCTGGAGTTCCATTCATGGAGCCTGCC...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCTCATCCAGTAGCGTCTaGCCAGCCGGAAGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLSSSSV*PAGRQK
Trigger: CTTTTGCCTTCCGGCTGGTCAGACGCTACTGGATGA...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACGGAGGGAGAATCGCTTaGACCTGGGAGACAGAGTTG +
Preference number: 2 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNGGRIA*TWETEL
Trigger: CAACTCTGTCTCCCAGGTTCAAGCGATTCTCCCTCC...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTAGAGGTTGTCACCTGGTaGAAGACCAGCTGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: SNCLHHPAKGQANATVSVEVVTW*KTSCPQ
Trigger: CTGGGGACAGCTGGTCTTGCACCAGGTGACAACCTC...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACCTCCCCATCCCTGGGTaGACCTCAATGAAGATGAGC +
Preference number: 2 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNLPIPG*TSMKMS
Trigger: GCTCATCTTCATTGAGGTCCACCCAGGGATGGGGAG...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCTGTCTTGGGCCCCAGTaGTTTCCCAGATCCCTGTTC +
Preference number: 2 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLCLGPQ*FPRSLF
Trigger: GAACAGGGATCTGGGAAACCACTGGGGCCCAAGACA...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGCAGTGACAATCAGTaGCCCAGTTGGGGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQGSDNQ*PSWGLP
Trigger: TGGCAGGCCCCAACTGGGGCACTGATTGTCACTGCC...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 90 bp AGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTaGCAACCATCGCCCATCCAACAGCCATTGCTATCCTTCTTCTGT +
Preference number: 2 (lower is better)
Translates to: SADESSVAYTSTAGS*QPSPIQQPLLSFFC
Trigger: ACAGAAGAAGGATAGCAATGGCTGTTGGATGGGCGATGGTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTGGGGTAACGGCGTTCTaGGGTTGTCACCTGGTGCAA +
Preference number: 2 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPGVTAF*GCHLVQ
Trigger: TTGCACCAGGTGACAACCTCAGAACGCCGTTACCCC...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACTGGGTTATTCTAGGGTaGGGGAGCGGACATGATCAT +
Preference number: 2 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNWVILG*GSGHDH
Trigger: ATGATCATGTCCGCTCCCTCACCCTAGAATAACCCA...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGCCGGGTGACTCTGGGTaGTGTCTGATTGGTTGCTGG +
Preference number: 2 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQPGDSG*CLIGCW
Trigger: CCAGCAACCAATCAGACACCACCCAGAGTCACCCGG...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTCTGGGTGGGGGCATGTaGCTCCAGTTTGAATGCACC +
Preference number: 2 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPLGGGM*LQFECT
Trigger: GGTGCATTCAAACTGGAGCCACATGCCCCCACCCAG...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCCAGCTTGATTCACTTTaGCCTCAGTCCTCAGTTCCC +
Preference number: 2 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLQLDSL*PQSSVP
Trigger: GGGAACTGAGGACTGAGGCCAAAGTGAATCAAGCTG...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCGCTCAGCCACAATGTTaGCTGCCAACGGTATGTCTT +
Preference number: 2 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLAQPQC*LPTVCL
Trigger: AAGACATACCGTTGGCAGCCAACATTGTGGCTGAGC...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 90 bp GCTAACAGAATCCCAATTTTGTGTTCAGGAGGCTGTGGGTATCCCTaGGTGCTCGTAGGCCCTTCCTTCCAGCCCTACAGCAGGACTCAT +
Preference number: 2 (lower is better)
Translates to: ANRIPILCSGGCGYP*VLVGPSFQPYSRTH
Trigger: ATGAGTCCTGCTGTAGGGCTGGAAGGAAGGGCCTACGAGCACCAAGGGATACCCACAGCCTCCTGAACACAAAATTGGGATTCTGTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTATCAGCTGTCTACCCATaGACAAAACCCAAAGCCCTG +
Preference number: 2 (lower is better)
Translates to: SNCLHHPAKGQANATVSVSAVYP*TKPKAL
Trigger: CAGGGCTTTGGGTTTTGTGCATGGGTAGACAGCTGA...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGTCTGAGGTTGTCACCTaGTGCAAGACCAGCTGTCCC +
Preference number: 2 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQSEVVT*CKTSCP
Trigger: GGGACAGCTGGTCTTGCACCAGGTGACAACCTCAGA...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGGACAGGAGAATTGCTTaGACCCGGGAGGCAGAGTTG +
Preference number: 2 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLDRRIA*TREAEL
Trigger: CAACTCTGCCTCCCGGGTTCAAGCAATTCTCCTGTC...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGCCGGCCTCAGCCTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 2 (lower is better)
Translates to: IPCILTTCHVMICKRVLMPASAS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCCGG...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGAGAAGGGGAGGCCCGTaGTCTGACTTCAGCTTGATT +
Preference number: 2 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQRRGGP*SDFSLI
Trigger: AATCAAGCTGAAGTCAGAGCACGGGCCTCCCCTTCT...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGCCCGGGAGGCAGAGTTaGAGTGAGCCGAGATCACGC +
Preference number: 2 (lower is better)
Translates to: IIRATATRGSRKCGCQREPGRQS*SEPRSR
Trigger: GCGTGATCTCGGCTCACTGCAACTCTGCCTCCCGGG...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCCCATCCAACAGCCATTaGTATCCTTCTTCTGTGCTA +
Preference number: 2 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLPSNSH*YPSSVL
Trigger: TAGCACAGAAGAAGGATAGCAATGGCTGTTGGATGG...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTCCCCAGGGACACATCTaGATCTCTTGGTGCCAACAA +
Preference number: 2 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPPQGHI*ISWCQQ
Trigger: TTGTTGGCACCAAGAGATCCAGATGTGTCCCTGGGG...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTAAAGATCTGGTCACACTaGACCCATGGTGGAACAACA +
Preference number: 2 (lower is better)
Translates to: SNCLHHPAKGQANATVSVKIWSH*THGGTT
Trigger: TGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTT...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGACTCTGGGTGGTGTCTaGTTGGTTGCTGGCATTACC +
Preference number: 2 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLTLGGV*LVAGIT
Trigger: GGTAATGCCAGCAACCAATCAGACACCACCCAGAGT...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGATACATTTCACACACCTaGGTCCTCCCACCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGYISHT*VLPPLS
Trigger: GGAGAGGGGTGGGAGGACTCAGGTGTGTGAAATGTA...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTCCGAGATCACGCTACTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSPRSRY*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTAGCGTGATCTCGG...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGCTGGGCGGAGGGGGCTaGAGCCCACATTTTAGAGAC +
Preference number: 2 (lower is better)
Translates to: IIRATATRGSRKCGCQRELGGGG*SPHFRD
Trigger: GTCTCTAAAATGTGGGCTGCAGCCCCCTCCGCCCAG...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACAGACCCTCCTAATATaGGTAGTCTTCCCATGTAGA +
Preference number: 2 (lower is better)
Translates to: SNCLHHPAKGQANATVSVQTLLI*VVFPCR
Trigger: TCTACATGGGAAGACTACCCATATTAGGAGGGTCTG...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGTGGGTGGTGTCTGATTaGTTGCTGGCATTACCAGAC +
Preference number: 2 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQWVVSD*LLALPD
Trigger: GTCTGGTAATGCCAGCAACCAATCAGACACCACCCA...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGAAGAAGTCGGAACCGTaGCCTTCGCTGCTTCAGAAG +
Preference number: 2 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLKKSEP*PSLLQK
Trigger: CTTCTGAAGCAGCGAAGGCCACGGTTCCGACTTCTT...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGTGTAGCATCCTTCTaGTTTCTCTGCCCATTCAGC +
Preference number: 2 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQGVASF*FLCPFS
Trigger: GCTGAATGGGCAGAGAAACCAGAAGGATGCTACACC...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 90 bp CAACAGCCATTGCTATCCTTCTTCTGTGCTAACAGAATCCCAATTTaGTGTTCAGGAGGCTGTGGGTATCCCTTGGTGCTCGTAGGCCCT +
Preference number: 2 (lower is better)
Translates to: QQPLLSFFCANRIPI*CSGGCGYPLVLVGP
Trigger: AGGGCCTACGAGCACCAAGGGATACCCACAGCCTCCTGAACACAAAATTGGGATTCTGTTAGCACAGAAGAAGGATAGCAATGGCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGTCCTTCTGGTTTCTCTaGCCATTCAGCTGTCTACCC +
Preference number: 2 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLSFWFL*PFSCLP
Trigger: GGGTAGACAGCTGAATGGGCAGAGAAACCAGAAGGA...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGAGCCACAATGTTGGCTaGCAACGGTATGTCTTTCCC +
Preference number: 2 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLSHNVG*QRYVFP
Trigger: GGGAAAGACATACCGTTGGCAGCCAACATTGTGGCT...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 90 bp CAAACTGAGTCAAGACACAAAACCCTGTTGGTCCAGGTCATACTCTaGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGTGCCCCAGTT +
Preference number: 2 (lower is better)
Translates to: QTESRHKTLLVQVIL*GEFLMSAVTISAPV
Trigger: AACTGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTGGACCAACAGGGTTTTGTGTCTTGACTCAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 90 bp ACATCCACGGCAGGCTCCTTGCAACCATCGCCCATCCAACAGCCATaGCTATCCTTCTTCTGTGCTAACAGAATCCCAATTTTGTGTTCA +
Preference number: 2 (lower is better)
Translates to: TSTAGSLQPSPIQQP*LSFFCANRIPILCS
Trigger: TGAACACAAAATTGGGATTCTGTTAGCACAGAAGAAGGATAGCAATGGCTGTTGGATGGGCGATGGTTGCAAGGAGCCTGCCGTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGGGTGTCACATGGGCCTaGGCCTGGACGGTATCTACA +
Preference number: 2 (lower is better)
Translates to: IPCILTTCHVMICKRVLMGVTWA*AWTVST
Trigger: TGTAGATACCGTCCAGGCTCAGGCCCATGTGACACC...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGGGAATCCTGGTCCCCTaGTCCCCATGGGATGAGATG +
Preference number: 2 (lower is better)
Translates to: IPCILTTCHVMICKRVLMGILVP*SPWDEM
Trigger: CATCTCATCCCATGGGGATCAGGGGACCAGGATTCC...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCTCCCACTGCTTCCTTTaGAAACATATACATTTCACA +
Preference number: 2 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLSHCFL*KHIHFT
Trigger: TGTGAAATGTATATGTTTTCAAAGGAAGCAGTGGGA...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACTGTTTTAATAAGAGTTaGACGCACAAATTGGCTTCC +
Preference number: 2 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNCFNKS*THKLAS
Trigger: GGAAGCCAATTTGTGCGTTCAACTCTTATTAAAACA...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCACTAAAGCATTGAGATaGATTCCGATGAACAAAGGT +
Preference number: 2 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLTKALR*IPMNKG
Trigger: ACCTTTGTTCATCGGAATTCATCTCAATGCTTTAGT...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGATGGTGTCTGATTGGTTaGTGGCATTACCAGACCCTC +
Preference number: 2 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGWCLIG*WHYQTL
Trigger: GAGGGTCTGGTAATGCCAGCAACCAATCAGACACCA...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTGCCTTTGATGGGATCTaGCAGCTTCCTCCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSAFDGI*QLPPSL
Trigger: CAAGGAGGGAGGAAGCTGGCAGATCCCATCAAAGGC...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGAACAGGTCCGGTGGGTaGACAGCAGGTGTCACATGG +
Preference number: 2 (lower is better)
Translates to: IPCILTTCHVMICKRVLMNRSGG*TAGVTW
Trigger: CCATGTGACACCTGCTGTCCACCCACCGGACCTGTT...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTTGCCAGAGAATCCACTaGTCAGGCTCTAGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSCQRIH*SGSREA
Trigger: TGCCTCCCTAGAGCCTGACCAGTGGATTCTCTGGCA...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGGAAAGCCTGGGGCTGTaGGTGTGGGAGAAACCTACT +
Preference number: 2 (lower is better)
Translates to: IPCILTTCHVMICKRVLMESLGL*VWEKPT
Trigger: AGTAGGTTTCTCCCACACTCACAGCCCCAGGCTTTC...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTACCAAATCCCAGAAGTaGTGTTGCCTGCGGAGACCA +
Preference number: 2 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSTKSQK*CCLRRP
Trigger: TGGTCTCCGCAGGCAACATCACTTCTGGGATTTGGT...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGTCCCCCATCATGACCTaGACACCATTAGAAGAAAGT +
Preference number: 2 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLSPIMT*TPLEES
Trigger: ACTTTCTTCTAATGGTGTGCAGGTCATGATGGGGGA...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp GTGTCACATGGGCCTGAGCCTGGACGGTATCTACAGAGAGATATTTTGGTTGTTGACACAAAACCCTGTTaGTCCAGGTCATACTCTTGG +
Preference number: 2 (lower is better)
Translates to: VSHGPEPGRYLQRDILVVDTKPC*SRSYSW
Trigger: CCAAGAGTATGACCTGGACCAACAGGGTTTTGTGTC...AACAACCAAAATATCTCTCTGTAGATACCGTCCAGGCTCAGGCCCATGTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGATGTCTGATTGGTTGCTaGCATTACCAGACCCTCCTA +
Preference number: 2 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGCLIGC*HYQTLL
Trigger: TAGGAGGGTCTGGTAATGCCAGCAACCAATCAGACA...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTCACATCTGGATCTCTTaGTGCCAACAACGGCAACTC +
Preference number: 2 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSHIWIS*CQQRQL
Trigger: GAGTTGCCGTTGTTGGCACCAAGAGATCCAGATGTG...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGAACTAAAAAGTACAGGTaGGCACCTGTAATCCCAGCT +
Preference number: 2 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGTKKYR*APVIPA
Trigger: AGCTGGGATTACAGGTGCCCACCTGTACTTTTTAGT...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGGTCACACTGGACCCATaGTGGAACAACATCAGCTGG +
Preference number: 2 (lower is better)
Translates to: IPCILTTCHVMICKRVLMVTLDP*WNNISW
Trigger: CCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGAC...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCGGTCATACTCTTGGGTaGGTTCTTGATGTCGGCAGT +
Preference number: 2 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPGHTLG*VLDVGS
Trigger: ACTGCCGACATCAAGAACTCACCCAAGAGTATGACC...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGATTTTGGTTGTTCACTaGGGGTTTGGCCGGGTGACT +
Preference number: 2 (lower is better)
Translates to: IPCILTTCHVMICKRVLMILVVH*GFGRVT
Trigger: AGTCACCCGGCCAAACCCTCAGTGAACAACCAAAAT...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTTCTAAACTGTCAGAGTaGACCATCAGCCCATCAACC +
Preference number: 2 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSSKLSE*TISPST
Trigger: GGTTGATGGGCTGATGGTTCACTCTGACAGTTTAGA...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGAGAAGTGATGTTGCCTaGGGAGACCAACTCAAAACC +
Preference number: 2 (lower is better)
Translates to: IIRATATRGSRKCGCQRERSDVA*GDQLKT
Trigger: GGTTTTGAGTTGGTCTCCGCAGGCAACATCACTTCT...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGGGCAGGGGAGACTCTTaGTCTTATCATTCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: IPCILTTCHVMICKRVLMGRGDS*SYHSRL
Trigger: AAGCCTTGAATGATAAGATCAAGAGTCTCCCCTGCC...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTTTGTACCTGCAAACCTaGGTAAACTTTTTCCCCTCA +
Preference number: 2 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSLYLQT*VNFFPS
Trigger: TGAGGGGAAAAAGTTTACTCAGGTTTGCAGGTACAA...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGCCCAGGTCTGATCAATaGGAAGCAATGGTAAATCTG +
Preference number: 2 (lower is better)
Translates to: IPCILTTCHVMICKRVLMPRSDQ*EAMVNL
Trigger: CAGATTTACCATTGCTTCTCATTGATCAGACCTGGG...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTCTGATTTACATGCCCTaGATTTCCCCTGTAGGAAAT +
Preference number: 2 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSLIYMP*ISPVGN
Trigger: ATTTCCTACAGGGGAAATTCAGGGCATGTAAATCAG...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGAACATATTCAGAAGTTTaGGTGCCTTTTGTGATAGCT +
Preference number: 2 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGTYSEV*VPFVIA
Trigger: AGCTATCACAAAAGGCACCCAAACTTCTGAATATGT...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGCAACCAAAGCTGCACTaGAGATGCATTTTATTGAGC +
Preference number: 2 (lower is better)
Translates to: IPCILTTCHVMICKRVLMQPKLH*RCILLS
Trigger: GCTCAATAAAATGCATCTGCAGTGCAGCTTTGGTTG...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGGTTGAACGCACAAATTaGCTTCCTTGCAATGTTTAC +
Preference number: 2 (lower is better)
Translates to: IIRATATRGSRKCGCQREVERTN*LPCNVY
Trigger: GTAAACATTGCAAGGAAGCCAATTTGTGCGTTCAAC...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTACCAACAGACTCTTCTaGAAGAAAACCTTTTATGAC +
Preference number: 2 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSTNRLF*KKTFYD
Trigger: GTCATAAAAGGTTTTCTTTCAGAAGAGTCTGTTGGT...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR TCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGAAAGAAAACCTTTTATaGCTGCTCCTTTCCCATTCT +
Preference number: 2 (lower is better)
Translates to: IPCILTTCHVMICKRVLMKENLL*LLLSHS
Trigger: AGAATGGGAAAGGAGCAGTCATAAAAGGTTTTCTTT...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR GCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGAAAACCTTTTATGACTaGTCCTTTCCCATTCTACCT +
Preference number: 2 (lower is better)
Translates to: IPCILTTCHVMICKRVLMKTFYD*SFPILP
Trigger: AGGTAGAATGGGAAAGGAGCAGTCATAAAAGGTTTT...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGTACAGAGAGATATTTTaGTTGTTCACTGAGGGTTTG +
Preference number: 2 (lower is better)
Translates to: IPCILTTCHVMICKRVLMYREIF*LFTEGL
Trigger: CAAACCCTCAGTGAACAACCAAAATATCTCTCTGTA...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 72 bp GGGGGCCAGGAAAGAAGTCGGAACCGTGGCCTTCGCTaGTTCAGAAGGGGAGGCCCGTGCTCTGACTTCAGC +
Preference number: 3 (lower is better)
Translates to: GGQERSRNRGLR*FRRGGPCSDFS
Trigger: GCTGAAGTCAGAGCACGGGCCTCCCCTTCTGAAGCAGCGAAGGCCACGGTTCCGACTTCTTTCCTGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 72 bp GCCTCAGTCCTCAGTTCCCAGGGGGTAACGGCGTTCTaGGGTTGTCACCTGGTGCAAGACCAGCTGTCCCCA +
Preference number: 3 (lower is better)
Translates to: ASVLSSQGVTAF*GCHLVQDQLSP
Trigger: TGGGGACAGCTGGTCTTGCACCAGGTGACAACCTCAGAACGCCGTTACCCCCTGGGAACTGAGGACTGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp CCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTaGTCCCCTGATCCCCATGGGATGAGATGGTGGGTG +
Preference number: 3 (lower is better)
Translates to: PWTEEQLRIRES*SPDPHGMRWWV
Trigger: CACCCACCATCTCATCCCATGGGGATCAGGGGACCAGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp AAGACCAGCTGTCCCCAGGGACACATCTGGATCTCTTaGTGCCAACAACGGCAACTCCAGAGGGGGCTGGGT +
Preference number: 3 (lower is better)
Translates to: KTSCPQGHIWIS*CQQRQLQRGLG
Trigger: ACCCAGCCCCCTCTGGAGTTGCCGTTGTTGGCACCAAGAGATCCAGATGTGTCCCTGGGGACAGCTGGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTATCCACGGCAGGCTCCTaGCAACCATCGCCCATCCAA +
Preference number: 3 (lower is better)
Translates to: SNCLHHPAKGQANATVSVSTAGS*QPSPIQ
Trigger: TTGGATGGGCGATGGTTGCAAGGAGCCTGCCGTGGA...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 72 bp GCTTCAGAAGGGGAGGCCCGTGCTCTGACTTCAGCTTaGTTCACTTTGGCCTCAGTCCTCAGTTCCCAGGGG +
Preference number: 3 (lower is better)
Translates to: ASEGEARALTSA*FTLASVLSSQG
Trigger: CCCCTGGGAACTGAGGACTGAGGCCAAAGTGAATCAAGCTGAAGTCAGAGCACGGGCCTCCCCTTCTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 72 bp AGAGGAGCAGCTTCGCATCAGGGAATCCTGGTCCCCTaGTCCCCATGGGATGAGATGGTGGGTGTAGCATCC +
Preference number: 3 (lower is better)
Translates to: RGAASHQGILVP*SPWDEMVGVAS
Trigger: GGATGCTACACCCACCATCTCATCCCATGGGGATCAGGGGACCAGGATTCCCTGATGCGAAGCTGCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 72 bp GTCCTCCCACCCCTCTCCACTCCACGGCAGGCTCCATaGATGGAACTCCAGGGGCTGCCTTTGTGTAATGAT +
Preference number: 3 (lower is better)
Translates to: VLPPLSTPRQAP*MELQGLPLCND
Trigger: ATCATTACACAAAGGCAGCCCCTGGAGTTCCATTCATGGAGCCTGCCGTGGAGTGGAGAGGGGTGGGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp ACCTGGTGCAAGACCAGCTGTCCCCAGGGACACATCTaGATCTCTTGGTGCCAACAACGGCAACTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: TWCKTSCPQGHI*ISWCQQRQLQR
Trigger: CCTCTGGAGTTGCCGTTGTTGGCACCAAGAGATCCAGATGTGTCCCTGGGGACAGCTGGTCTTGCACCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 72 bp TGGCCTTCGCTGCTTCAGAAGGGGAGGCCCGTGCTCTaGCTTCAGCTTGATTCACTTTGGCCTCAGTCCTCA +
Preference number: 3 (lower is better)
Translates to: WPSLLQKGRPVL*LQLDSLWPQSS
Trigger: TGAGGACTGAGGCCAAAGTGAATCAAGCTGAAGTCAGAGCACGGGCCTCCCCTTCTGAAGCAGCGAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 72 bp AACCGTGGCCTTCGCTGCTTCAGAAGGGGAGGCCCGTaGTCTGACTTCAGCTTGATTCACTTTGGCCTCAGT +
Preference number: 3 (lower is better)
Translates to: NRGLRCFRRGGP*SDFSLIHFGLS
Trigger: ACTGAGGCCAAAGTGAATCAAGCTGAAGTCAGAGCACGGGCCTCCCCTTCTGAAGCAGCGAAGGCCACGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 72 bp AGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTaGAACCATCGCCCATCCAACAGCCATTGCTATCCT +
Preference number: 3 (lower is better)
Translates to: RALWPTHPRQAP*NHRPSNSHCYP
Trigger: AGGATAGCAATGGCTGTTGGATGGGCGATGGTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp GGTTGTTCACTGAGGGTTTGGCCGGGTGACTCTGGGTaGTGTCTGATTGGTTGCTGGCATTACCAGACCCTC +
Preference number: 3 (lower is better)
Translates to: GCSLRVWPGDSG*CLIGCWHYQTL
Trigger: GAGGGTCTGGTAATGCCAGCAACCAATCAGACACCACCCAGAGTCACCCGGCCAAACCCTCAGTGAACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp TCCCACCCCTCTCCACTCCACGGCAGGCTCCATGAATaGAACTCCAGGGGCTGCCTTTGTGTAATGATCAAG +
Preference number: 3 (lower is better)
Translates to: SHPSPLHGRLHE*NSRGCLCVMIK
Trigger: CTTGATCATTACACAAAGGCAGCCCCTGGAGTTCCATTCATGGAGCCTGCCGTGGAGTGGAGAGGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp ACAGAGATCTGCCAAGCCATCTCCTCTTCAACTGCCTaGGCGGAGGGGGCTGCAGCCCACATTTTAGAGACA +
Preference number: 3 (lower is better)
Translates to: TEICQAISSSTA*AEGAAAHILET
Trigger: TGTCTCTAAAATGTGGGCTGCAGCCCCCTCCGCCCAGGCAGTTGAAGAGGAGATGGCTTGGCAGATCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 72 bp GCATCAGGGAATCCTGGTCCCCTGATCCCCATGGGATaGGATGGTGGGTGTAGCATCCTTCTGGTTTCTCTG +
Preference number: 3 (lower is better)
Translates to: ASGNPGPLIPMG*DGGCSILLVSL
Trigger: CAGAGAAACCAGAAGGATGCTACACCCACCATCTCATCCCATGGGGATCAGGGGACCAGGATTCCCTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 72 bp GGCATGTGGCTCCAGTTTGAATGCACCATGTCCATCTaGCAGAGAATCCACTGGTCAGGCTCTAGGGAGGCA +
Preference number: 3 (lower is better)
Translates to: GMWLQFECTMSI*QRIHWSGSREA
Trigger: TGCCTCCCTAGAGCCTGACCAGTGGATTCTCTGGCAGATGGACATGGTGCATTCAAACTGGAGCCACATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 72 bp ATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTaGACCACCCTGCTAAAGGGCAGGCCAATGCCACCG +
Preference number: 3 (lower is better)
Translates to: MSLQIPGIPAIV*TTLLKGRPMPP
Trigger: CGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCTGGTATGCCTGGAATCTGCAGTGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp TTCCTGGCCACGAAAACAGTGCTGATGAGAGCTCTGTaGCCTACACATCCACGGCAGGCTCCTTGCAACCAT +
Preference number: 3 (lower is better)
Translates to: FLATKTVLMRAL*PTHPRQAPCNH
Trigger: ATGGTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGTTTTCGTGGCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 72 bp GTTTGGCCGGGTGACTCTGGGTGGTGTCTGATTGGTTaGTGGCATTACCAGACCCTCCTAATATGGGTAGTC +
Preference number: 3 (lower is better)
Translates to: VWPGDSGWCLIG*WHYQTLLIWVV
Trigger: GACTACCCATATTAGGAGGGTCTGGTAATGCCAGCAACCAATCAGACACCACCCAGAGTCACCCGGCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 72 bp AGCCATCTCCTCTTCAACTGCCTGGGCGGAGGGGGCTaGAGCCCACATTTTAGAGACACAGTATTGTTTGCA +
Preference number: 3 (lower is better)
Translates to: SHLLFNCLGGGG*SPHFRDTVLFA
Trigger: TGCAAACAATACTGTGTCTCTAAAATGTGGGCTGCAGCCCCCTCCGCCCAGGCAGTTGAAGAGGAGATGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp TGGCCGGGTGACTCTGGGTGGTGTCTGATTGGTTGCTaGCATTACCAGACCCTCCTAATATGGGTAGTCTTC +
Preference number: 3 (lower is better)
Translates to: WPGDSGWCLIGC*HYQTLLIWVVF
Trigger: GAAGACTACCCATATTAGGAGGGTCTGGTAATGCCAGCAACCAATCAGACACCACCCAGAGTCACCCGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp TCCCCATGGGATGAGATGGTGGGTGTAGCATCCTTCTaGTTTCTCTGCCCATTCAGCTGTCTACCCATGCAC +
Preference number: 3 (lower is better)
Translates to: SPWDEMVGVASF*FLCPFSCLPMH
Trigger: GTGCATGGGTAGACAGCTGAATGGGCAGAGAAACCAGAAGGATGCTACACCCACCATCTCATCCCATGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp CTGGGCCAATCAGCTTCATTCCTGAAGATCTGGGAGTaGGGCACTGAGCAGCTGAGTCAGGTATGTTTGCAG +
Preference number: 3 (lower is better)
Translates to: LGQSASFLKIWE*GTEQLSQVCLQ
Trigger: CTGCAAACATACCTGACTCAGCTGCTCAGTGCCCCACTCCCAGATCTTCAGGAATGAAGCTGATTGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGCAGCTTCCTCCCTCCTaGTCTATGTCCCCTGCCTTC +
Preference number: 3 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLQLPPS*SMSPAF
Trigger: GAAGGCAGGGGACATAGACAAGGAGGGAGGAAGCTG...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCTGGCAGGGGAGACTCTaGATCTTATCATTCAAGGCT +
Preference number: 3 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLWQGRL*ILSFKA
Trigger: AGCCTTGAATGATAAGATCAAGAGTCTCCCCTGCCA...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 72 bp ATCAGCTTCATTCCTGAAGATCTGGGAGTGGGGCACTaGGCAGCTGAGTCAGGTATGTTTGCAGAGCTGGGT +
Preference number: 3 (lower is better)
Translates to: ISFIPEDLGVGH*AAESGMFAELG
Trigger: ACCCAGCTCTGCAAACATACCTGACTCAGCTGCTCAGTGCCCCACTCCCAGATCTTCAGGAATGAAGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 72 bp GGCTCCAGTAAACCAAATCCCAGAAGTGATGTTGCCTaGGGAGACCAACTCAAAACCAACTGGCCTCCCACT +
Preference number: 3 (lower is better)
Translates to: GSSKPNPRSDVA*GDQLKTNWPPT
Trigger: AGTGGGAGGCCAGTTGGTTTTGAGTTGGTCTCCGCAGGCAACATCACTTCTGGGATTTGGTTTACTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGAGCTCAGCCACAATGTaGGCTGCCAACGGTATGTCT +
Preference number: 3 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLSSATM*AANGMS
Trigger: AGACATACCGTTGGCAGCCAACATTGTGGCTGAGCT...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGAGGAGGGAGAATCGCTaGAACCTGGGAGACAGAGTT +
Preference number: 3 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLRRENR*NLGDRV
Trigger: AACTCTGTCTCCCAGGTTCAAGCGATTCTCCCTCCT...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 72 bp CATGCTGGGATGGGCATGACACCCAGGTCTGATCAATaGGAAGCAATGGTAAATCTGCCAGGGGACTTCCTT +
Preference number: 3 (lower is better)
Translates to: HAGMGMTPRSDQ*EAMVNLPGDFL
Trigger: AAGGAAGTCCCCTGGCAGATTTACCATTGCTTCTCATTGATCAGACCTGGGTGTCATGCCCATCCCAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp ACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTaGGTGGACCTCAATGAAGATGAGCAAACTGAGTCA +
Preference number: 3 (lower is better)
Translates to: TENPLEQTSPHP*VDLNEDEQTES
Trigger: TGACTCAGTTTGCTCATCTTCATTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp AAGGCCCTCAACTGTAAACCCCTTTACCCTAGTCTCTaGGAAATATTCCTGCCCACCAAGCACTCTATCCCC +
Preference number: 3 (lower is better)
Translates to: KALNCKPLYPSL*EIFLPTKHSIP
Trigger: GGGGATAGAGTGCTTGGTGGGCAGGAATATTTCCCAGAGACTAGGGTAAAGGGGTTTACAGTTGAGGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGGCATGTGGCTCCAGTTaGAATGCACCATGTCCATCT +
Preference number: 3 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLACGSS*NAPCPS
Trigger: AGATGGACATGGTGCATTCAAACTGGAGCCACATGC...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTTGCTCTGACTTCAGCTaGATTCACTTTGGCCTCAGT +
Preference number: 3 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPCSDFS*IHFGLS
Trigger: ACTGAGGCCAAAGTGAATCAAGCTGAAGTCAGAGCA...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 72 bp GAGATATTTTGGTTGTTCACTGAGGGTTTGGCCGGGTaGCTCTGGGTGGTGTCTGATTGGTTGCTGGCATTA +
Preference number: 3 (lower is better)
Translates to: EIFWLFTEGLAG*LWVVSDWLLAL
Trigger: TAATGCCAGCAACCAATCAGACACCACCCAGAGTCACCCGGCCAAACCCTCAGTGAACAACCAAAATATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 72 bp GGCCCCAGTGGTTTCCCAGATCCCTGTTCCTCTGAATaGCACCAGGCTGTACTTTATTCCTATGCAATCTCT +
Preference number: 3 (lower is better)
Translates to: GPSGFPDPCSSE*HQAVLYSYAIS
Trigger: AGAGATTGCATAGGAATAAAGTACAGCCTGGTGTCATTCAGAGGAACAGGGATCTGGGAAACCACTGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp TCTACAGAGAGATATTTTGGTTGTTCACTGAGGGTTTaGCCGGGTGACTCTGGGTGGTGTCTGATTGGTTGC +
Preference number: 3 (lower is better)
Translates to: STERYFGCSLRV*PGDSGWCLIGC
Trigger: GCAACCAATCAGACACCACCCAGAGTCACCCGGCCAAACCCTCAGTGAACAACCAAAATATCTCTCTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTTGTCTGCTCTGGCCTTaGATGGGATCTGCCAGCTTC +
Preference number: 3 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSCLLWP*MGSASF
Trigger: GAAGCTGGCAGATCCCATCAAAGGCCAGAGCAGACA...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 72 bp CAGGCTCCTTGCAACCATCGCCCATCCAACAGCCATTaGTATCCTTCTTCTGTGCTAACAGAATCCCAATTT +
Preference number: 3 (lower is better)
Translates to: QAPCNHRPSNSH*YPSSVLTESQF
Trigger: AAATTGGGATTCTGTTAGCACAGAAGAAGGATAGCAATGGCTGTTGGATGGGCGATGGTTGCAAGGAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTGTGGTGTCTGATTGGTaGCTGGCATTACCAGACCCT +
Preference number: 3 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSVVSDW*LALPDP
Trigger: AGGGTCTGGTAATGCCAGCAACCAATCAGACACCAC...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGCTCCAGGGGCTGCCTTaGTGTAATGATCAAGACGTC +
Preference number: 3 (lower is better)
Translates to: IIRATATRGSRKCGCQRELQGLP*CNDQDV
Trigger: GACGTCTTGATCATTACACAAAGGCAGCCCCTGGAG...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTATGGTTTAAGCCACTATaGACTGAGATTACTGTTCTT +
Preference number: 3 (lower is better)
Translates to: SNCLHHPAKGQANATVSVWFKPL*TEITVL
Trigger: AAGAACAGTAATCTCAGTCAATAGTGGCTTAAACCA...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 72 bp CAGAGCTGGGTTATGAGGCTATGGAAGCTCTGTGCATaGTTATGCATACACAGCAGCCACAAGGAAACAGAT +
Preference number: 3 (lower is better)
Translates to: QSWVMRLWKLCA*LCIHSSHKETD
Trigger: ATCTGTTTCCTTGTGGCTGCTGTGTATGCATAATCATGCACAGAGCTTCCATAGCCTCATAACCCAGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp GTACCTCTCCACCACTTCTTCCTGACCCAATTGAATTaGACCAAGACTCAATCCAACACTAAACTGGGCCAA +
Preference number: 3 (lower is better)
Translates to: VPLHHFFLTQLN*TKTQSNTKLGQ
Trigger: TTGGCCCAGTTTAGTGTTGGATTGAGTCTTGGTCCAATTCAATTGGGTCAGGAAGAAGTGGTGGAGAGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCCTCTTGGGTGAGTTCTaGATGTCGGCAGTGACAATC +
Preference number: 3 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPLLGEF*MSAVTI
Trigger: GATTGTCACTGCCGACATCAAGAACTCACCCAAGAG...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGGTCCAGGTCATACTCTaGGGTGAGTTCTTGATGTCG +
Preference number: 3 (lower is better)
Translates to: IPCILTTCHVMICKRVLMVQVIL*GEFLMS
Trigger: CGACATCAAGAACTCACCCAAGAGTATGACCTGGAC...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTAGACACAAAACCCTGTaGGTCCAGGTCATACTCTTG +
Preference number: 3 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSRHKTL*VQVILL
Trigger: CAAGAGTATGACCTGGACCAACAGGGTTTTGTGTCT...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp CTGATTGGTTGCTGGCATTACCAGACCCTCCTAATATaGGTAGTCTTCCCATGTAGATCCACAGGTTATGAA +
Preference number: 3 (lower is better)
Translates to: LIGCWHYQTLLI*VVFPCRSTGYE
Trigger: TTCATAACCTGTGGATCTACATGGGAAGACTACCCATATTAGGAGGGTCTGGTAATGCCAGCAACCAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR-3UTR CAA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGCCCATTCTACCTTCTTaGAAAAGAAATATGATGTCC +
Preference number: 3 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLPILPS*KRNMMS
Trigger: GGACATCATATTTCTTTTCAAAGAAGGTAGAATGGG...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 72 bp CTGATGAATAGACTTGAGAGTTTATGCACATGTCACTaGAGATTCCAGGCATACCAGCAATTGTCTGCACCA +
Preference number: 3 (lower is better)
Translates to: LMNRLESLCTCH*RFQAYQQLSAP
Trigger: TGGTGCAGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAGTCTATTCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 72 bp CAGGACATGCTGGATATTCCATGCATACTGACCACTTaGCACGTTATGATCTGTAAGAGAGTTCTGATGAAT +
Preference number: 3 (lower is better)
Translates to: QDMLDIPCILTT*HVMICKRVLMN
Trigger: ATTCATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAATATCCAGCATGTCCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp AAAAACCTAGACTCCTCTTTTGAACATTGTAAGATCTaGTCACACTGGACCCATGGTGGAACAACATCAGCT +
Preference number: 3 (lower is better)
Translates to: KNLDSSFEHCKI*SHWTHGGTTSA
Trigger: AGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTCAAAAGAGGAGTCTAGGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR GCA 72 bp TGTAAGAGAGTTCTGATGAATAGACTTGAGAGTTTATaGACATGTCACTGCAGATTCCAGGCATACCAGCAA +
Preference number: 3 (lower is better)
Translates to: CKRVLMNRLESL*TCHCRFQAYQQ
Trigger: TTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAGTCTATTCATCAGAACTCTCTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 72 bp CATTGGAAAGGAGATTATCACACTAAAGCATTGAGATaGATTCCGATGAACAAAGGTAGTCAGACCGTTAGG +
Preference number: 3 (lower is better)
Translates to: HWKGDYHTKALR*IPMNKGSQTVR
Trigger: CCTAACGGTCTGACTACCTTTGTTCATCGGAATTCATCTCAATGCTTTAGTGTGATAATCTCCTTTCCAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR TCA 72 bp AGGACCATGTCTTATGATATTTTGCATCCTCAGTGTTaGATAACATGTCCAGGACATGCTGGATATTCCATG +
Preference number: 3 (lower is better)
Translates to: RTMSYDILHPQC*ITCPGHAGYSM
Trigger: CATGGAATATCCAGCATGTCCTGGACATGTTATTCAACACTGAGGATGCAAAATATCATAAGACATGGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CCA 72 bp ATGTTCTCAGCTAAAGGTCTCACATATTCAGAAGTTTaGGTGCCTTTTGTGATAGCTCTTGTATCATTTGAT +
Preference number: 3 (lower is better)
Translates to: MFSAKGLTYSEV*VPFVIALVSFD
Trigger: ATCAAATGATACAAGAGCTATCACAAAAGGCACCCAAACTTCTGAATATGTGAGACCTTTAGCTGAGAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CCAGCCCAGGCTGGGCATCACGAACACAGCCAGGACGACCTCGAACACTGTCCCGCGCCGCTTCCTCCCTaGAGCAGCAGCTGTTCGGGG +
Preference number: 4 (lower is better)
Translates to: PAQAGHHEHSQDDLEHCPAPLPP*SSSCSG
Trigger: CCCCGAACAGCTGCTGCTCCAGGGAGGAAGCGGCGC...GGGACAGTGTTCGAGGTCGTCCTGGCTGTGTTCGTGATGCCCAGCCTGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CCA 90 bp CAGCGTCACCGACTGGGGAACTCCTCCGATCCCGAAGCCCACCAGGCCCCGGAGGCCTCTAGGCCCACGTaGACCCCTTCAATCTGGACT +
Preference number: 4 (lower is better)
Translates to: QRHRLGNSSDPEAHQAPEASRPT*TPSIWT
Trigger: AGTCCAGATTGAAGGGGTCCACGTGGGCCTAGAGGC...CTCCGGGGCCTGGTGGGCTTCGGGATCGGAGGAGTTCCCCAGTCGGTGACGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR TCA 90 bp CCAGCCCAGGCTGGGCATCACGAACACAGCCAGGACGACCTCGAACACTGTCCCCATGGTAGTGGTGGATaGCGAGCCCTCCGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PAQAGHHEHSQDDLEHCPHGSGG*RALRFS
Trigger: TGAAAACCGGAGGGCTCGTCATCCACCACTACCATG...GGGACAGTGTTCGAGGTCGTCCTGGCTGTGTTCGTGATGCCCAGCCTGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CCA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTAGCGCCGCTTCCTCCCTaGAGCAGCAGCTGTTCGGGG +
Preference number: 4 (lower is better)
Translates to: SNCLHHPAKGQANATVSVAPLPP*SSSCSG
Trigger: CCCCGAACAGCTGCTGCTCCAGGGAGGAAGCGGCGC...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 72 bp CAAGACCAGCTGTCCCCAGGGACACATCTGGATCTCTaGGTGCCAACAACGGCAACTCCAGAGGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QDQLSPGTHLDL*VPTTATPEGAG
Trigger: CCCAGCCCCCTCTGGAGTTGCCGTTGTTGGCACCAAGAGATCCAGATGTGTCCCTGGGGACAGCTGGTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 72 bp AGTCCTCAGTTCCCAGGGGGTAACGGCGTTCTGAGGTaGTCACCTGGTGCAAGACCAGCTGTCCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SPQFPGGNGVLR*SPGARPAVPRD
Trigger: GTCCCTGGGGACAGCTGGTCTTGCACCAGGTGACAACCTCAGAACGCCGTTACCCCCTGGGAACTGAGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp GCCAGGACGACCTCGAACACTGTCCCGATGGCCCAGAATACCTCAATCAGCAAACGCGCTGCGCCAGGATaGGCCCTTCTCATGGCCCTT +
Preference number: 4 (lower is better)
Translates to: ARTTSNTVPMAQNTSISKRAAPG*ALLMAL
Trigger: AAGGGCCATGAGAAGGGCTCATCCTGGCGCAGCGCG...TTTGCTGATTGAGGTATTCTGGGCCATCGGGACAGTGTTCGAGGTCGTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR GCA 90 bp CAGCCAGGACGACCTCGAACACTGTCCCGATGGCCCAGAATACCTCAATCAGCACCTCCATGTCCGCGCTaGGCCAGGATGAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QPGRPRTLSRWPRIPQSAPPCPR*ARMSPS
Trigger: AGAAGGGCTCATCCTGGCGCAGCGCGGACATGGAGG...TGCTGATTGAGGTATTCTGGGCCATCGGGACAGTGTTCGAGGTCGTCCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CCA 90 bp AGCCAGGACGACCTCGAACACTGTCCCGATGGCCCAGAATACCTCAATCAGCAATCAGCACCGGGAAGCTaGACAGCACCCGCGCCGCTT +
Preference number: 4 (lower is better)
Translates to: SQDDLEHCPDGPEYLNQQSAPGS*TAPAPL
Trigger: AAGCGGCGCGGGTGCTGTCCAGCTTCCCGGTGCTGA...TTGCTGATTGAGGTATTCTGGGCCATCGGGACAGTGTTCGAGGTCGTCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CCA 90 bp CCAGCCCAGGCTGGGCATCACGAACACAGCCAGGACGACCTCGAACACTGTCCCGGCAGCTGCCTTAGCTaGAATAAGTCCTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PAQAGHHEHSQDDLEHCPGSCLS*NKSSSM
Trigger: CATGGAGGAGGACTTATTCCAGCTAAGGCAGCTGCC...GGGACAGTGTTCGAGGTCGTCCTGGCTGTGTTCGTGATGCCCAGCCTGGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CCA 90 bp CCAGCCCAGGCTGGGCATCACGAACACAGCCAGGACGACCTCGAACACTGTCCCCACCATCAGTGGGATTaGCAAACTCCTTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: PAQAGHHEHSQDDLEHCPHHQWD*QTPWAQ
Trigger: CTGTGCCCAAGGAGTTTGCCAATCCCACTGATGGTG...GGGACAGTGTTCGAGGTCGTCCTGGCTGTGTTCGTGATGCCCAGCCTGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTCGGGGAGGGAGCCGCTaGGGACCAGCCCACGAGACA +
Preference number: 4 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPRGGSR*GPAHET
Trigger: TGTCTCGTGGGCTGGTCCCCAGCGGCTCCCTCCCCG...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAACGGCCGACCATCTCCTaGCCCCACTCCCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQRPTIS*PHSRWL
Trigger: CAGCCACCGGGAGTGGGGCCAGGAGATGGTCGGCCG...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTATCCTCTTCAACTGCCTaGGCGGAGGGGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SNCLHHPAKGQANATVSVSSSTA*AEGAAA
Trigger: GGCTGCAGCCCCCTCCGCCCAGGCAGTTGAAGAGGA...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp CTTTCATGGGAAGGAACTCGGCATACAGCGTCACCGACTGGGGAACTCCTCCGAAGCCGTGTCGTCCTCTaGCCTTGCACTCTCGCCTGT +
Preference number: 4 (lower is better)
Translates to: LSWEGTRHTASPTGELLRSRVVL*PCTLAC
Trigger: ACAGGCGAGAGTGCAAGGTCAGAGGACGACACGGCT...TCGGAGGAGTTCCCCAGTCGGTGACGCTGTATGCCGAGTTCCTTCCCATGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR TCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACGAGGGTTTGGCCGGGTaGCTCTGGGTGGTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNEGLAG*LWVVSD
Trigger: ATCAGACACCACCCAGAGTCACCCGGCCAAACCCTC...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATACAGCGTCACCGACTGGGGAACTCCTCCGATCCCGAAGCCCACCAGGCCCCGTGGAGCTGGACATCATaGCTACAAAGACCACCATCA +
Preference number: 4 (lower is better)
Translates to: IQRHRLGNSSDPEAHQAPWSWTS*LQRPPS
Trigger: TGATGGTGGTCTTTGTAGGCATGATGTCCAGCTCCA...CGGGGCCTGGTGGGCTTCGGGATCGGAGGAGTTCCCCAGTCGGTGACGCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR GCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCGGCAGTGACAATCAGTaGCCCAGTTGGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLGSDNQ*PSWGLP
Trigger: TGGCAGGCCCCAACTGGGGCACTGATTGTCACTGCC...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCCCACGGCAGGCTCCTTaGAACCATCGCCCATCCAAC +
Preference number: 4 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLPRQAP*NHRPSN
Trigger: GTTGGATGGGCGATGGTTGCAAGGAGCCTGCCGTGG...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CAGGCTGGGCATCACGAACACAGCCAGGACGACCTCGAACACTGTCCCGATGGCCCCAGAGCGTGGAGCTaGACATCATGCCTACAAAGA +
Preference number: 4 (lower is better)
Translates to: QAGHHEHSQDDLEHCPDGPRAWS*TSCLQR
Trigger: TCTTTGTAGGCATGATGTCCAGCTCCACGCTCTGGG...GCCATCGGGACAGTGTTCGAGGTCGTCCTGGCTGTGTTCGTGATGCCCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CCA 90 bp CTTTCATGGGAAGGAACTCGGCATACAGCGTCACCGACTGGGGAACTCCTCCGAAACGCCAGCCCAGGCTaGGCATCACGAACACAGCCA +
Preference number: 4 (lower is better)
Translates to: LSWEGTRHTASPTGELLRNASPG*ASRTQP
Trigger: TGGCTGTGTTCGTGATGCCCAGCCTGGGCTGGCGTT...TCGGAGGAGTTCCCCAGTCGGTGACGCTGTATGCCGAGTTCCTTCCCATGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACCAAAGCACAGGGCCATaGTCTTCTTGCGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNQSTGP*SSCAPG
Trigger: GCCTGGGGCGCAAGAAGACCATGGCCCTGTGCTTTG...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACGTGGGAGAAACCTACTaGACAGGTCCGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNVGETY*TGPVGG
Trigger: TCCACCCACCGGACCTGTTCAGTAGGTTTCTCCCAC...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCGCCTCTAGGCCCACGTaGACCCCTTCAATCTGGACT +
Preference number: 4 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLASRPT*TPSIWT
Trigger: AGTCCAGATTGAAGGGGTCCACGTGGGCCTAGAGGC...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ACACAGCCAGGACGACCTCGAACACTGTCCCGATGGCCCAGAATACCTCAATCATACAGCGTCACCGACTaGGGAACTCCTCCGATCCCG +
Preference number: 4 (lower is better)
Translates to: TQPGRPRTLSRWPRIPQSYSVTD*GTPPIP
Trigger: CGGGATCGGAGGAGTTCCCCAGTCGGTGACGCTGTA...TGATTGAGGTATTCTGGGCCATCGGGACAGTGTTCGAGGTCGTCCTGGCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCGGCAGGCTCCATGAATaGAACTCCAGGGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLGRLHE*NSRGCL
Trigger: AAGGCAGCCCCTGGAGTTCCATTCATGGAGCCTGCC...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 72 bp GAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTaGCAACCATCGCCCATCCAACAGCCATTGCTATCC +
Preference number: 4 (lower is better)
Translates to: ESSVAYTSTAGS*QPSPIQQPLLS
Trigger: GGATAGCAATGGCTGTTGGATGGGCGATGGTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGCGCGCTGCGCCAGGATaGGCCCTTCTCATGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLRAAPG*ALLMAL
Trigger: AAGGGCCATGAGAAGGGCTCATCCTGGCGCAGCGCG...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp CACAGCCAGGACGACCTCGAACACTGTCCCGATGGCCCAGAATACCTCAATCAGCCTGCCGTACTGGTCTaGGATATTTCCCCAGAGCGT +
Preference number: 4 (lower is better)
Translates to: HSQDDLEHCPDGPEYLNQPAVLV*DISPER
Trigger: ACGCTCTGGGGAAATATCTCAGACCAGTACGGCAGG...CTGATTGAGGTATTCTGGGCCATCGGGACAGTGTTCGAGGTCGTCCTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR GCA 90 bp CAGGTCATACTCTTGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGTGCCCCACCTCCATGTCCGCGCTaGGCCAGGATGAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QVILLGEFLMSAVTISAPPPCPR*ARMSPS
Trigger: AGAAGGGCTCATCCTGGCGCAGCGCGGACATGGAGG...TGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTAAGCCTCCACTCGCAATaGAGCTGTGGTGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SNCLHHPAKGQANATVSVSLHSQ*SCGARM
Trigger: CATCCTGGCACCACAGCTGCATTGCGAGTGGAGGCT...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp AACGCCAGCCCAGGCTGGGCATCACGAACACAGCCAGGACGACCTCGAACACTGTGGACCCCTTCAATCTaGACTTCATGCTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: NASPGWASRTQPGRPRTLWTPSI*TSCSPE
Trigger: TTCAGGAGAGCATGAAGTCCAGATTGAAGGGGTCCA...CAGTGTTCGAGGTCGTCCTGGCTGTGTTCGTGATGCCCAGCCTGGGCTGGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CCA 90 bp AACGCCAGCCCAGGCTGGGCATCACGAACACAGCCAGGACGACCTCGAACACTGAAAGACCACCATCAGTaGGATTGGCAAACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NASPGWASRTQPGRPRTLKDHHQ*DWQTPW
Trigger: CCAAGGAGTTTGCCAATCCCACTGATGGTGGTCTTT...CAGTGTTCGAGGTCGTCCTGGCTGTGTTCGTGATGCCCAGCCTGGGCTGGCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGGGGCCCGCGTTGCCGTaGGGTAGACCTCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLGPALP*GRPQVC
Trigger: ACACACCTGAGGTCTACCCCACGGCAACGCGGGCCC...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp GTGTCACATGGGCCTGAGCCTGGACGGTATCTACAGAGAGATATTTTGGTTGTTCCCACTCCCGGTGGCTaGACTCCTGCAGTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: VSHGPEPGRYLQRDILVVPTPGG*TPAVLG
Trigger: GCCGAGGACTGCAGGAGTCCAGCCACCGGGAGTGGG...AACAACCAAAATATCTCTCTGTAGATACCGTCCAGGCTCAGGCCCATGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 72 bp TGCTTCAGAAGGGGAGGCCCGTGCTCTGACTTCAGCTaGATTCACTTTGGCCTCAGTCCTCAGTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: CFRRGGPCSDFS*IHFGLSPQFPG
Trigger: CCCTGGGAACTGAGGACTGAGGCCAAAGTGAATCAAGCTGAAGTCAGAGCACGGGCCTCCCCTTCTGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp TTTCATGGGAAGGAACTCGGCATACAGCGTCACCGACTGGGGAACTCCTCCGATGAGTCCACAGCACGCTaGTCTTCAGCCCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: FHGKELGIQRHRLGNSSDESTAR*SSALFS
Trigger: GGAAAACAGGGCTGAAGATCAGCGTGCTGTGGACTC...ATCGGAGGAGTTCCCCAGTCGGTGACGCTGTATGCCGAGTTCCTTCCCATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR TCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACTGCAGAGCTGGGTTATaGGGCTATGGAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNCRAGL*GYGSSV
Trigger: CACAGAGCTTCCATAGCCTCATAACCCAGCTCTGCA...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CTTTCATGGGAAGGAACTCGGCATACAGCGTCACCGACTGGGGAACTCCTCCGATTGCACTCTCGCCTGTaGGACGGAATTTCACAACCG +
Preference number: 4 (lower is better)
Translates to: LSWEGTRHTASPTGELLRLHSRL*DGISQP
Trigger: CGGTTGTGAAATTCCGTCGCACAGGCGAGAGTGCAA...TCGGAGGAGTTCCCCAGTCGGTGACGCTGTATGCCGAGTTCCTTCCCATGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR GCA 90 bp CAGGCTGGGCATCACGAACACAGCCAGGACGACCTCGAACACTGTCCCGATGGCATACACGGGCGCAAATaGACTAAGGATGCCATAGTA +
Preference number: 4 (lower is better)
Translates to: QAGHHEHSQDDLEHCPDGIHGRK*TKDAIV
Trigger: TACTATGGCATCCTTAGTGCATTTGCGCCCGTGTAT...GCCATCGGGACAGTGTTCGAGGTCGTCCTGGCTGTGTTCGTGATGCCCAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR GCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAAGTCAGCAATGCCACCTaGCAGCTTGGGAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQVSNAT*QLGSLH
Trigger: GTGGAGGCTCCCAAGCTGGCAGGTGGCATTGCTGAC...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTCGACCTGGTAACACCTaGACCGTGCATTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPRPGNT*TVHSSA
Trigger: GGCCGAGGAATGCACGGTGCAGGTGTTACCAGGTCG...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCAGAAGGGGAGGCCCGTaGTCTGACTTCAGCTTGATT +
Preference number: 4 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLRRGGP*SDFSLI
Trigger: AATCAAGCTGAAGTCAGAGCACGGGCCTCCCCTTCT...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGCATCTCCTCTTCAACTaGCTGGGCGGAGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLHLLFN*LGGGGC
Trigger: GCAGCCCCCTCCGCCCAGGCAGTTGAAGAGGAGATG...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CTGGCTTTCATGGGAAGGAACTCGGCATACAGCGTCACCGACTGGGGAACTCCTGATTGGCAAACTCCTTaGGCACAGCTGCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: LAFMGRNSAYSVTDWGTPDWQTP*AQLPHH
Trigger: ATGATGGGGCAGCTGTGCCCAAGGAGTTTGCCAATC...AGGAGTTCCCCAGTCGGTGACGCTGTATGCCGAGTTCCTTCCCATGAAAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTTACAGCGTCACCGACTaGGGAACTCCTCCGATCCCG +
Preference number: 4 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPYSVTD*GTPPIP
Trigger: CGGGATCGGAGGAGTTCCCCAGTCGGTGACGCTGTA...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGAACGCCAGCCCAGGCTaGGCATCACGAACACAGCCA +
Preference number: 4 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQNASPG*ASRTQP
Trigger: TGGCTGTGTTCGTGATGCCCAGCCTGGGCTGGCGTT...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCCCCCAGGGACACATCTaGATCTCTTGGTGCCAACAA +
Preference number: 4 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLPQGHI*ISWCQQ
Trigger: TTGTTGGCACCAAGAGATCCAGATGTGTCCCTGGGG...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CAGGTCATACTCTTGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGTGCCCCAGTAATCTCAGCACTGTaGGAGGCCGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QVILLGEFLMSAVTISAPVISAL*EAEAGG
Trigger: TCCACCCGCCTCGGCCTCCCACAGTGCTGAGATTAC...TGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 72 bp ATCCCAATTTTGTGTTCAGGAGGCTGTGGGTATCCCTaGGTGCTCGTAGGCCCTTCCTTCCAGCCCTACAGC +
Preference number: 4 (lower is better)
Translates to: IPILCSGGCGYP*VLVGPSFQPYS
Trigger: GCTGTAGGGCTGGAAGGAAGGGCCTACGAGCACCAAGGGATACCCACAGCCTCCTGAACACAAAATTGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGTGTCACATGGGCCTaGGCCTGGACGGTATCTACA +
Preference number: 4 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQGVTWA*AWTVST
Trigger: TGTAGATACCGTCCAGGCTCAGGCCCATGTGACACC...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCTGGGTTATTCTAGGGTaGGGGAGCGGACATGATCAT +
Preference number: 4 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLWVILG*GSGHDH
Trigger: ATGATCATGTCCGCTCCCTCACCCTAGAATAACCCA...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACAAAGGTCCCTCATTTTaGCTCGGTCTTCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNKGPSF*LGLPVW
Trigger: CCAGACAGGAAGACCGAGGCAAAATGAGGGACCTTT...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CTGGCTTTCATGGGAAGGAACTCGGCATACAGCGTCACCGACTGGGGAACTCCTTCAATCTGGACTTCATaGTCTCCTGAAGCCGTGTCG +
Preference number: 4 (lower is better)
Translates to: LAFMGRNSAYSVTDWGTPSIWTS*SPEAVS
Trigger: CGACACGGCTTCAGGAGAGCATGAAGTCCAGATTGA...AGGAGTTCCCCAGTCGGTGACGCTGTATGCCGAGTTCCTTCCCATGAAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR GCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCGCCGAGGGCCCGCGTTaGCGTGGGGTAGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPAEGPR*RGVDLR
Trigger: CCTGAGGTCTACCCCACGGCAACGCGGGCCCTCGGC...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACATACCAGCAATTGTCTaGACCACCCTGCTAAAGGGC +
Preference number: 4 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNIPAIV*TTLLKG
Trigger: GCCCTTTAGCAGGGTGGTGCAGACAATTGCTGGTAT...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CACAGCCAGGACGACCTCGAACACTGTCCCGATGGCCCAGAATACCTCAATCAGGATGAGCCCTTCTCATaGCCCTTACATGGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: HSQDDLEHCPDGPEYLNQDEPFS*PLHGSG
Trigger: ACCACTACCATGTAAGGGCCATGAGAAGGGCTCATC...CTGATTGAGGTATTCTGGGCCATCGGGACAGTGTTCGAGGTCGTCCTGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACGGATCATCATCTCCATaGCATCAGCCATCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNGSSSP*HQPSKP
Trigger: TGGCTTGGATGGCTGATGCCATGGAGATGATGATCC...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTAGATTCCAGCATCACCTaGGCGATGAACGGAGTGATG +
Preference number: 4 (lower is better)
Translates to: SNCLHHPAKGQANATVSVDSSIT*AMNGVM
Trigger: CATCACTCCGTTCATCGCCCAGGTGATGCTGGAATC...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAAAACAGGTCCGGTGGGTaGACAGCAGGTGTCACATGG +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQNRSGG*TAGVTW
Trigger: CCATGTGACACCTGCTGTCCACCCACCGGACCTGTT...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACGGTGTAGCATCCTTCTaGTTTCTCTGCCCATTCAGC +
Preference number: 4 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNGVASF*FLCPFS
Trigger: GCTGAATGGGCAGAGAAACCAGAAGGATGCTACACC...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTATCATTCCTGAAGATCTaGGAGTGGGGCACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SNCLHHPAKGQANATVSVSFLKI*EWGTEQ
Trigger: CTGCTCAGTGCCCCACTCCCAGATCTTCAGGAATGA...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 72 bp ACCCTGTTGGTCCAGGTCATACTCTTGGGTGAGTTCTaGATGTCGGCAGTGACAATCAGTGCCCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: TLLVQVILLGEF*MSAVTISAPVG
Trigger: CCCAACTGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTGGACCAACAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTGAGTCCACAGCACGCTaGTCTTCAGCCCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPESTAR*SSALFS
Trigger: GGAAAACAGGGCTGAAGATCAGCGTGCTGTGGACTC...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAAGTGGTGCCAGGATGCTaGGGATCATCATCTCCATGG +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQVVPGC*GSSSPW
Trigger: CCATGGAGATGATGATCCTCAGCATCCTGGCACCAC...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGGGGGTAACGGCGTTCTaGGGTTGTCACCTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLGVTAF*GCHLVQ
Trigger: TTGCACCAGGTGACAACCTCAGAACGCCGTTACCCC...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAAGACAGGAGAATTGCTTaGACCCGGGAGGCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQDRRIA*TREAEL
Trigger: CAACTCTGCCTCCCGGGTTCAAGCAATTCTCCTGTC...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGCCGGCCTCAGCCTCCTaGGTAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: IIRATATRGSRKCGCQREPASAS*VAGTTG
Trigger: GCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCCGG...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTGGAGGGAGAATCGCTTaGACCTGGGAGACAGAGTTG +
Preference number: 4 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPGGRIA*TWETEL
Trigger: CAACTCTGTCTCCCAGGTTCAAGCGATTCTCCCTCC...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACTCAGCCCTGTTTTCCTaGCGTACTGGTCTGAGATAT +
Preference number: 4 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNSALFS*RTGLRY
Trigger: ATATCTCAGACCAGTACGGCAGGAAAACAGGGCTGA...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCCTCTTGCCATGCCGCTaGAGGTGCCCAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPLLPCR*RCPGRG
Trigger: CCCTCGGCCTGGGCACCTGCAGCGGCATGGCAAGAG...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTATCCTTCTGGTTTCTCTaGCCATTCAGCTGTCTACCC +
Preference number: 4 (lower is better)
Translates to: SNCLHHPAKGQANATVSVSFWFL*PFSCLP
Trigger: GGGTAGACAGCTGAATGGGCAGAGAAACCAGAAGGA...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACTGGAACTCCAGGGGCTaGCTTTGTGTAATGATCAAG +
Preference number: 4 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNWNSRG*LCVMIK
Trigger: CTTGATCATTACACAAAGGCAGCCCCTGGAGTTCCA...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CAGGTCATACTCTTGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGTGCCCCAGTTTCCCCAGCGGCATaGGAGCTCCGTTTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: QVILLGEFLMSAVTISAPVSPAA*ELRFQL
Trigger: CAACTGAAAACGGAGCTCCCATGCCGCTGGGGAAAC...TGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACTGGACCCCTTCAATCTaGACTTCATGCTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNWTPSI*TSCSPE
Trigger: TTCAGGAGAGCATGAAGTCCAGATTGAAGGGGTCCA...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CTTTCATGGGAAGGAACTCGGCATACAGCGTCACCGACTGGGGAACTCCTCCGAGTTTTCCTGCCGTACTaGTCTGAGATATTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LSWEGTRHTASPTGELLRVFLPY*SEIFPQ
Trigger: CTGGGGAAATATCTCAGACCAGTACGGCAGGAAAAC...TCGGAGGAGTTCCCCAGTCGGTGACGCTGTATGCCGAGTTCCTTCCCATGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CCA 90 bp GTGTCACATGGGCCTGAGCCTGGACGGTATCTACAGAGAGATATTTTGGTTGTTTGCCACCTGCCAGCTTaGGAGCCTCCACTCGCAATG +
Preference number: 4 (lower is better)
Translates to: VSHGPEPGRYLQRDILVVCHLPA*EPPLAM
Trigger: CATTGCGAGTGGAGGCTCCCAAGCTGGCAGGTGGCA...AACAACCAAAATATCTCTCTGTAGATACCGTCCAGGCTCAGGCCCATGTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTCTCCCCATCCCTGGGTaGACCTCAATGAAGATGAGC +
Preference number: 4 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPLPIPG*TSMKMS
Trigger: GCTCATCTTCATTGAGGTCCACCCAGGGATGGGGAG...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGCCGGGTGACTCTGGGTaGTGTCTGATTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLPGDSG*CLIGCW
Trigger: CCAGCAACCAATCAGACACCACCCAGAGTCACCCGG...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGTGCCAGAGAATCCACTaGTCAGGCTCTAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQCQRIH*SGSREA
Trigger: TGCCTCCCTAGAGCCTGACCAGTGGATTCTCTGGCA...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACACATCTGGATCTCTTaGTGCCAACAACGGCAACTC +
Preference number: 4 (lower is better)
Translates to: SNCLHHPAKGQANATVSVHIWIS*CQQRQL
Trigger: GAGTTGCCGTTGTTGGCACCAAGAGATCCAGATGTG...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCCAACTCAAAACCAACTaGCCTCCCACTGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLQLKTN*PPTASF
Trigger: AAAGGAAGCAGTGGGAGGCCAGTTGGTTTTGAGTTG...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGCTGATGAGAGCTCTGTaGCCTACACATCCACGGCAG +
Preference number: 4 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQLMRAL*PTHPRQ
Trigger: CTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAG...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGACTCTGGGTGGTGTCTaGTTGGTTGCTGGCATTACC +
Preference number: 4 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQTLGGV*LVAGIT
Trigger: GGTAATGCCAGCAACCAATCAGACACCACCCAGAGT...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CATTTAGCTCTGGCTTTCATGGGAAGGAACTCGGCATACAGCGTCACCGACTGGTTCACAACCGGCAGCTaGCTTAGCTGGAATAAGTCC +
Preference number: 4 (lower is better)
Translates to: HLALAFMGRNSAYSVTDWFTTGS*LSWNKS
Trigger: GGACTTATTCCAGCTAAGGCAGCTGCCGGTTGTGAA...CCAGTCGGTGACGCTGTATGCCGAGTTCCTTCCCATGAAAGCCAGAGCTAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR GCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAATTGCACTCTCGCCTGTaGGACGGAATTTCACAACCG +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQLHSRL*DGISQP
Trigger: CGGTTGTGAAATTCCGTCGCACAGGCGAGAGTGCAA...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp TTTCATGGGAAGGAACTCGGCATACAGCGTCACCGACTGGGGAACTCCTCCGATTCAGCCCTGTTTTCCTaGCGTACTGGTCTGAGATAT +
Preference number: 4 (lower is better)
Translates to: FHGKELGIQRHRLGNSSDSALFS*RTGLRY
Trigger: ATATCTCAGACCAGTACGGCAGGAAAACAGGGCTGA...ATCGGAGGAGTTCCCCAGTCGGTGACGCTGTATGCCGAGTTCCTTCCCATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR GCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTGAGAGCACCCACTCTTaGCATGCCGCTGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSESTHS*HAAAGA
Trigger: GGCACCTGCAGCGGCATGGCAAGAGTGGGTGCTCTC...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTAACCGTGGCCTTCGCTaGTTCAGAAGGGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSNRGLR*FRRGGP
Trigger: CGGGCCTCCCCTTCTGAAGCAGCGAAGGCCACGGTT...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CAGGTCATACTCTTGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGTGCCCCAGATTGGCAAACTCCTTaGGCACAGCTGCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: QVILLGEFLMSAVTISAPDWQTP*AQLPHH
Trigger: ATGATGGGGCAGCTGTGCCCAAGGAGTTTGCCAATC...TGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTCCCAGAGCGTGGAGCTaGACATCATGCCTACAAAGA +
Preference number: 4 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPPRAWS*TSCLQR
Trigger: TCTTTGTAGGCATGATGTCCAGCTCCACGCTCTGGG...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp GTGTCACATGGGCCTGAGCCTGGACGGTATCTACAGAGAGATATTTTGGTTGTTTGTTCACTGAGGGTTTaGCCGGGTGACTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VSHGPEPGRYLQRDILVVCSLRV*PGDSGW
Trigger: CCACCCAGAGTCACCCGGCCAAACCCTCAGTGAACA...AACAACCAAAATATCTCTCTGTAGATACCGTCCAGGCTCAGGCCCATGTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGTGTCTTGGGCCCCAGTaGTTTCCCAGATCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLCLGPQ*FPRSLF
Trigger: GAACAGGGATCTGGGAAACCACTGGGGCCCAAGACA...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGTCATACTCTTGGGTaGGTTCTTGATGTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQGHTLG*VLDVGS
Trigger: ACTGCCGACATCAAGAACTCACCCAAGAGTATGACC...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAAATTTTGGTTGTTCACTaGGGGTTTGGCCGGGTGACT +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQILVVH*GFGRVT
Trigger: AGTCACCCGGCCAAACCCTCAGTGAACAACCAAAAT...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp GTGTCACATGGGCCTGAGCCTGGACGGTATCTACAGAGAGATATTTTGGTTGTTGAAAGCCTGGGGCTGTaGGTGTGGGAGAAACCTACT +
Preference number: 4 (lower is better)
Translates to: VSHGPEPGRYLQRDILVVESLGL*VWEKPT
Trigger: AGTAGGTTTCTCCCACACTCACAGCCCCAGGCTTTC...AACAACCAAAATATCTCTCTGTAGATACCGTCCAGGCTCAGGCCCATGTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGAGGGAGGCCCGTGCTCTaGCTTCAGCTTGATTCACTT +
Preference number: 4 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGGRPVL*LQLDSL
Trigger: AAGTGAATCAAGCTGAAGTCAGAGCACGGGCCTCCC...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGAGTCACCATTCAGCCTaGCCAAGGAGGGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: IIRATATRGSRKCGCQRESHHSA*PRRGPG
Trigger: TCCTGGCCCCCTCCTTGGTCAGGCTGAATGGTGACT...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACTTGTACCTGCAAACCTaGGTAAACTTTTTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNLYLQT*VNFFPS
Trigger: TGAGGGGAAAAAGTTTACTCAGGTTTGCAGGTACAA...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGCCACGGCAGGCTCCATaGATGGAACTCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: IPCILTTCHVMICKRVLMPRQAP*MELQGL
Trigger: CAGCCCCTGGAGTTCCATTCATGGAGCCTGCCGTGG...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGATCATCCAGTAGCGTCTaGCCAGCCGGAAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGSSSSV*PAGRQK
Trigger: CTTTTGCCTTCCGGCTGGTCAGACGCTACTGGATGA...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCCAGGTCTGATCAATaGGAAGCAATGGTAAATCTG +
Preference number: 4 (lower is better)
Translates to: SNCLHHPAKGQANATVSVPRSDQ*EAMVNL
Trigger: CAGATTTACCATTGCTTCTCATTGATCAGACCTGGG...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCTTGCATCCTCAGTGTTaGATAACATGTCCAGGACAT +
Preference number: 4 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLLHPQC*ITCPGH
Trigger: ATGTCCTGGACATGTTATTCAACACTGAGGATGCAA...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAATTCACAACCGGCAGCTaGCTTAGCTGGAATAAGTCC +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQFTTGS*LSWNKS
Trigger: GGACTTATTCCAGCTAAGGCAGCTGCCGGTTGTGAA...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAATCAATCTGGACTTCATaGTCTCCTGAAGCCGTGTCG +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQSIWTS*SPEAVS
Trigger: CGACACGGCTTCAGGAGAGCATGAAGTCCAGATTGA...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCCGGTGGCTGGACTCCTaGAGTCCTCGGCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPRWLDS*SPRPLV
Trigger: GACCAAAGGCCGAGGACTGCAGGAGTCCAGCCACCG...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGCCGAGATCACGCTACTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: IIRATATRGSRKCGCQREPRSRY*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTAGCGTGATCTCGG...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGCCCGGGAGGCAGAGTTaGAGTGAGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: IPCILTTCHVMICKRVLMPGRQS*SEPRSR
Trigger: GCGTGATCTCGGCTCACTGCAACTCTGCCTCCCGGG...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTCTGGGCGGAGGGGGCTaGAGCCCACATTTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSLGGGG*SPHFRD
Trigger: GTCTCTAAAATGTGGGCTGCAGCCCCCTCCGCCCAG...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGGGCAGCTGCCTTAGCTaGAATAAGTCCTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLGSCLS*NKSSSM
Trigger: CATGGAGGAGGACTTATTCCAGCTAAGGCAGCTGCC...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CAGGTCATACTCTTGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGTGCCCCATGGGTGGTGTCTGATTaGTTGCTGGCATTACCAGAC +
Preference number: 4 (lower is better)
Translates to: QVILLGEFLMSAVTISAPWVVSD*LLALPD
Trigger: GTCTGGTAATGCCAGCAACCAATCAGACACCACCCA...TGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp GTGTCACATGGGCCTGAGCCTGGACGGTATCTACAGAGAGATATTTTGGTTGTTTCTGAGGTTGTCACCTaGTGCAAGACCAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: VSHGPEPGRYLQRDILVVSEVVT*CKTSCP
Trigger: GGGACAGCTGGTCTTGCACCAGGTGACAACCTCAGA...AACAACCAAAATATCTCTCTGTAGATACCGTCCAGGCTCAGGCCCATGTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CAGGTCATACTCTTGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGTGCCCCACAGCTTGATTCACTTTaGCCTCAGTCCTCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: QVILLGEFLMSAVTISAPQLDSL*PQSSVP
Trigger: GGGAACTGAGGACTGAGGCCAAAGTGAATCAAGCTG...TGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGCGCATCAGGGAATCCTaGTCCCCTGATCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: IIRATATRGSRKCGCQRERIRES*SPDPHG
Trigger: CCCATGGGGATCAGGGGACCAGGATTCCCTGATGCG...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGGAGGGGCAGCTGTCTTaGGCCCCAGTGGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: IPCILTTCHVMICKRVLMEGQLS*APVVSQ
Trigger: CTGGGAAACCACTGGGGCCCAAGACAGCTGCCCCTC...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACAATCCAACACTAAACTaGGCCAATCAGCTTCATTCC +
Preference number: 4 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNNPTLN*ANQLHS
Trigger: GGAATGAAGCTGATTGGCCCAGTTTAGTGTTGGATT...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTGGAAGAGTTCTGTGGTaGGTAGAACTAACCCGTAGT +
Preference number: 4 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPGRVLW*VELTRS
Trigger: ACTACGGGTTAGTTCTACTCACCACAGAACTCTTCC...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTGGAATCCTGGTCCCCTaGTCCCCATGGGATGAGATG +
Preference number: 4 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSGILVP*SPWDEM
Trigger: CATCTCATCCCATGGGGATCAGGGGACCAGGATTCC...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp CAGGTCATACTCTTGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGTGCCCCAGGCAGGGGAGACTCTTaGTCTTATCATTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: QVILLGEFLMSAVTISAPGRGDS*SYHSRL
Trigger: AAGCCTTGAATGATAAGATCAAGAGTCTCCCCTGCC...TGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGCATGACACCCAGGTCTaGTCAATGAGAAGCAATGGT +
Preference number: 4 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQHDTQV*SMRSNG
Trigger: ACCATTGCTTCTCATTGATCAGACCTGGGTGTCATG...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp CAGGTCATACTCTTGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGTGCCCCATCTAAACTGTCAGAGTaGACCATCAGCCCATCAACC +
Preference number: 4 (lower is better)
Translates to: QVILLGEFLMSAVTISAPSKLSE*TISPST
Trigger: GGTTGATGGGCTGATGGTTCACTCTGACAGTTTAGA...TGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAACAGCACATCATACCTTaGACTTTCAGGCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQQHIIP*TFRQPE
Trigger: TTCTGGCTGCCTGAAAGTGCAAGGTATGATGTGCTG...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGGCAGCCACTGTAAACTaGCAGAGTCAGGTACACAGA +
Preference number: 4 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLAATVN*QSQVHR
Trigger: TCTGTGTACCTGACTCTGGCAGTTTACAGTGGCTGC...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTGTAACACCTGCACCGTaGATTCCTCGGCCGACCATC +
Preference number: 4 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSVTPAP*IPRPTI
Trigger: GATGGTCGGCCGAGGAATGCACGGTGCAGGTGTTAC...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGTGGTGTCTGATTGGTTaGTGGCATTACCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLWCLIG*WHYQTL
Trigger: GAGGGTCTGGTAATGCCAGCAACCAATCAGACACCA...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTTGTCTGATTGGTTGCTaGCATTACCAGACCCTCCTA +
Preference number: 4 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPCLIGC*HYQTLL
Trigger: TAGGAGGGTCTGGTAATGCCAGCAACCAATCAGACA...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACGTTGAACGCACAAATTaGCTTCCTTGCAATGTTTAC +
Preference number: 4 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNVERTN*LPCNVY
Trigger: GTAAACATTGCAAGGAAGCCAATTTGTGCGTTCAAC...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGAGCTACAGCCACACGTaGTTCAAGGAAATGTGGTTG +
Preference number: 4 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQSYSHT*FKEMWL
Trigger: CAACCACATTTCCTTGAACCACGTGTGGCTGTAGCT...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 72 bp GCAGGCTCCTTGCAACCATCGCCCATCCAACAGCCATaGCTATCCTTCTTCTGTGCTAACAGAATCCCAATT +
Preference number: 4 (lower is better)
Translates to: AGSLQPSPIQQP*LSFFCANRIPI
Trigger: AATTGGGATTCTGTTAGCACAGAAGAAGGATAGCAATGGCTGTTGGATGGGCGATGGTTGCAAGGAGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTCATGGTAGTGGTGGATaGCGAGCCCTCCGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSHGSGG*RALRFS
Trigger: TGAAAACCGGAGGGCTCGTCATCCACCACTACCATG...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGCCTGCCGTACTGGTCTaGGATATTTCCCCAGAGCGT +
Preference number: 4 (lower is better)
Translates to: IIRATATRGSRKCGCQREPAVLV*DISPER
Trigger: ACGCTCTGGGGAAATATCTCAGACCAGTACGGCAGG...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGCTGCATCTTCCACCATaGAAGTATCATCAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQLHLPP*KYHQWD
Trigger: ATCCCACTGATGATACTTTCATGGTGGAAGATGCAG...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGACTTTTCCTGGTTCCCTaGCAGCACATCATACCTTGC +
Preference number: 4 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGLFLVP*QHIIPC
Trigger: GCAAGGTATGATGTGCTGTCAGGGAACCAGGAAAAG...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp GTGTCACATGGGCCTGAGCCTGGACGGTATCTACAGAGAGATATTTTGGTTGTTAATCAGCTTCATTCCTaGAGATCTGGGAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VSHGPEPGRYLQRDILVVNQLHS*RSGSGA
Trigger: TGCCCCACTCCCAGATCTTCAGGAATGAAGCTGATT...AACAACCAAAATATCTCTCTGTAGATACCGTCCAGGCTCAGGCCCATGTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAAATACACGGGCGCAAATaGACTAAGGATGCCATAGTA +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQIHGRK*TKDAIV
Trigger: TACTATGGCATCCTTAGTGCATTTGCGCCCGTGTAT...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTGCCGCAGACATCTCCTaGCTGGAAGAGTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSAADIS*LEEFCG
Trigger: ACCACAGAACTCTTCCAGGCAGGAGATGTCTGCGGC...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCGAGGTTGTCACCTGGTaGAAGACCAGCTGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPEVVTW*KTSCPQ
Trigger: CTGGGGACAGCTGGTCTTGCACCAGGTGACAACCTC...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp GTGTCACATGGGCCTGAGCCTGGACGGTATCTACAGAGAGATATTTTGGTTGTTTCAGCTGTCTACCCATaGACAAAACCCAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: VSHGPEPGRYLQRDILVVSAVYP*TKPKAL
Trigger: CAGGGCTTTGGGTTTTGTGCATGGGTAGACAGCTGA...AACAACCAAAATATCTCTCTGTAGATACCGTCCAGGCTCAGGCCCATGTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGACCTGGGAGACAGAGTTaGAGTGAGCTGAGACTTCAT +
Preference number: 4 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGPGRQS*SELRLH
Trigger: ATGAAGTCTCAGCTCACTGCAACTCTGTCTCCCAGG...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTTGGTGCAAAAGTAATTaGATTTGGGAGGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPWCKSN*IWEAKV
Trigger: CACCTTGGCCTCCCAAATGCAATTACTTTTGCACCA...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAACCATCCAACAGCCATTaGTATCCTTCTTCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQPSNSH*YPSSVL
Trigger: TAGCACAGAAGAAGGATAGCAATGGCTGTTGGATGG...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCCTGGGTGGGGGCATGTaGCTCCAGTTTGAATGCACC +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPLGGGM*LQFECT
Trigger: GGTGCATTCAAACTGGAGCCACATGCCCCCACCCAG...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTACTAAAAAGTACAGGTaGGCACCTGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPTKKYR*APVIPA
Trigger: AGCTGGGATTACAGGTGCCCACCTGTACTTTTTAGT...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGAGCTCAGCCACAATGTTaGCTGCCAACGGTATGTCTT +
Preference number: 4 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGAQPQC*LPTVCL
Trigger: AAGACATACCGTTGGCAGCCAACATTGTGGCTGAGC...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 72 bp AAGAAAGTGTTGTCTCCAACAAGCTCAGCCACAATGTaGGCTGCCAACGGTATGTCTTTCCCCACTCATTGG +
Preference number: 4 (lower is better)
Translates to: KKVLSPTSSATM*AANGMSFPTHW
Trigger: CCAATGAGTGGGGAAAGACATACCGTTGGCAGCCAACATTGTGGCTGAGCTTGTTGGAGACAACACTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGACAGACAGCTTCCACTaGAATTTTCCAAAGCCAATG +
Preference number: 4 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQTDSFH*NFPKPM
Trigger: CATTGGCTTTGGAAAATTTCAGTGGAAGCTGTCTGT...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCTACATTTCACACACCTaGGTCCTCCCACCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPYISHT*VLPPLS
Trigger: GGAGAGGGGTGGGAGGACTCAGGTGTGTGAAATGTA...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp CAGGTCATACTCTTGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGTGCCCCACAGGACCATGTCTTATaGTATTTTGCATCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QVILLGEFLMSAVTISAPQDHVL*YFASSV
Trigger: CACTGAGGATGCAAAATATCATAAGACATGGTCCTG...TGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGAGCCAATGGCTTCCACTaGATCTTCCACCATGAAAGT +
Preference number: 4 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGANGFH*IFHHES
Trigger: ACTTTCATGGTGGAAGATGCAGTGGAAGCCATTGGC...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGTGGAGCTGGACATCATaGCTACAAAGACCACCGAGG +
Preference number: 4 (lower is better)
Translates to: IIRATATRGSRKCGCQREWSWTS*LQRPPR
Trigger: CCTCGGTGGTCTTTGTAGGCATGATGTCCAGCTCCA...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCGGCCAGGCTGCATTTTaGCTCTACAGCCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPGQAAF*LYSLLP
Trigger: CGGAAGAAGGCTGTAGAGGCAAAATGCAGCCTGGCC...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCACTCGCAGGCCAGGCTaGATTTTGCCTCTACAGCCT +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPTRRPG*ILPLQP
Trigger: AGGCTGTAGAGGCAAAATGCAGCCTGGCCTGCGAGT...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAAACCTTCTCTGATCTCTaGCTGGTTTTGGTTCTAATG +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQTFSDL*LVLVLM
Trigger: CATTAGAACCAAAACCAGGCAGAGATCAGAGAAGGT...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CAGGTCATACTCTTGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGTGCCCCAAAGCTGCACTGCAGATaGATTTTATTGAGCTCACAC +
Preference number: 4 (lower is better)
Translates to: QVILLGEFLMSAVTISAPKLHCR*ILLSSH
Trigger: GTGTGAGCTCAATAAAATGCATCTGCAGTGCAGCTT...TGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGATGCTGGATATTCCATaGATACTGACCACTTGCCAC +
Preference number: 4 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLMLDIP*ILTTCH
Trigger: GTGGCAAGTGGTCAGTATGCATGGAATATCCAGCAT...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGAACATGTCCAGGACATaGTGGATATTCCATGCATAC +
Preference number: 4 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQNMSRT*WIFHAY
Trigger: GTATGCATGGAATATCCAGCATGTCCTGGACATGTT...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp GTGTCACATGGGCCTGAGCCTGGACGGTATCTACAGAGAGATATTTTGGTTGTTGTTTTCCTGCCGTACTaGTCTGAGATATTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VSHGPEPGRYLQRDILVVVFLPY*SEIFPQ
Trigger: CTGGGGAAATATCTCAGACCAGTACGGCAGGAAAAC...AACAACCAAAATATCTCTCTGTAGATACCGTCCAGGCTCAGGCCCATGTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCCTCGCAATGCAGCTGTaGTGCCAGGATGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPLAMQL*CQDAED
Trigger: ATCCTCAGCATCCTGGCACCACAGCTGCATTGCGAG...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTAAGCACAGGGTCAGATaGCCAACATGCAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSKHRVR*PTCRGW
Trigger: CCATCCTCTGCATGTTGGCCATCTGACCCTGTGCTT...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGTGGAACAACATCAGCTaGAAGGGAGTTGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: IPCILTTCHVMICKRVLMWNNIS*KGVAAP
Trigger: GGGGGCTGCAACTCCCTTCCAGCTGATGTTGTTCCA...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTCTGACCCAATTGAATTaGACCAAGACTCAATCCAAC +
Preference number: 4 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPLTQLN*TKTQSN
Trigger: GTTGGATTGAGTCTTGGTCCAATTCAATTGGGTCAG...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCATCGGTCACTATTCCTaGGAGCCAGAGTTCGACCTG +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPIGHYS*EPEFDL
Trigger: CAGGTCGAACTCTGGCTCTCAGGAATAGTGACCGAT...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGACCAAATCCCAGAAGTaGTGTTGCCTGCGGAGACCA +
Preference number: 4 (lower is better)
Translates to: IPCILTTCHVMICKRVLMTKSQK*CCLRRP
Trigger: TGGTCTCCGCAGGCAACATCACTTCTGGGATTTGGT...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTTGCACCATGTCCATCTaGCAGAGAATCCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSCTMSI*QRIHWS
Trigger: TGACCAGTGGATTCTCTGGCAGATGGACATGGTGCA...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGGCTATGGAAGCTCTGTaGATGATTATGCATACACAG +
Preference number: 4 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLAMEAL*MIMHTQ
Trigger: CTGTGTATGCATAATCATGCACAGAGCTTCCATAGC...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCGCAGTCCTCGGCCTTTaGTCTCAATGGGCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPAVLGL*SQWAKS
Trigger: GCTTTTTGCCCATTGAGACCAAAGGCCGAGGACTGC...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGAAGAAGTCGGAACCGTaGCCTTCGCTGCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: IPCILTTCHVMICKRVLMKKSEP*PSLLQK
Trigger: CTTCTGAAGCAGCGAAGGCCACGGTTCCGACTTCTT...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCCCCTGCAGACAGGGCTaGTGTTTCTCTTGTCCTTAC +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPPCRQG*CFSCPY
Trigger: GTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 72 bp TCAAGACACAAAACCCTGTTGGTCCAGGTCATACTCTaGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGT +
Preference number: 4 (lower is better)
Translates to: SRHKTLLVQVIL*GEFLMSAVTIS
Trigger: ACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTGGACCAACAGGGTTTTGTGTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 72 bp TTGCTATCCTTCTTCTGTGCTAACAGAATCCCAATTTaGTGTTCAGGAGGCTGTGGGTATCCCTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LLSFFCANRIPI*CSGGCGYPLVL
Trigger: GAGCACCAAGGGATACCCACAGCCTCCTGAACACAAAATTGGGATTCTGTTAGCACAGAAGAAGGATAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAATCCCACTGCTTCCTTTaGAAACATATACATTTCACA +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQSHCFL*KHIHFT
Trigger: TGTGAAATGTATATGTTTTCAAAGGAAGCAGTGGGA...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAAACCAACAGACTCTTCTaGAAGAAAACCTTTTATGAC +
Preference number: 4 (lower is better)
Translates to: IYREPPRANISPSLGGPQTNRLF*KKTFYD
Trigger: GTCATAAAAGGTTTTCTTTCAGAAGAGTCTGTTGGT...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGACTGATTTACATGCCCTaGATTTCCCCTGTAGGAAAT +
Preference number: 4 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGLIYMP*ISPVGN
Trigger: ATTTCCTACAGGGGAAATTCAGGGCATGTAAATCAG...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCAGCCACAATGTTGGCTaGCAACGGTATGTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPSHNVG*QRYVFP
Trigger: GGGAAAGACATACCGTTGGCAGCCAACATTGTGGCT...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGAGAGAGACAGAGATCTaGCAAGCCATCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: IIRATATRGSRKCGCQRERETEI*QAISSS
Trigger: TGAAGAGGAGATGGCTTGGCAGATCTCTGTCTCTCT...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGACCCATCAACCAAAGCTaGACTGCAGATGCATTTTAT +
Preference number: 4 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGPINQS*TADAFY
Trigger: ATAAAATGCATCTGCAGTGCAGCTTTGGTTGATGGG...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCGATGAGCCCTTCTCATaGCCCTTACATGGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPDEPFS*PLHGSG
Trigger: ACCACTACCATGTAAGGGCCATGAGAAGGGCTCATC...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCGAAACTCAGAGAGGGTaGTCCACAGCAAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPETQRG*STASPC
Trigger: ACATGGACTTGCTGTGGACCACCCTCTCTGAGTTTC...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCAGTCACAAGGACACCTaGAAACTCAGAGAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPSHKDT*KLREGG
Trigger: ACCACCCTCTCTGAGTTTCCAGGTGTCCTTGTGACT...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCACATCTCCCCATCCCTaGGTGGACCTCAATGAAGAT +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPTSPHP*VDLNED
Trigger: ATCTTCATTGAGGTCCACCCAGGGATGGGGAGATGT...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
3UTR CAA 72 bp ACCAACTCAAAACCAACTGGCCTCCCACTGCTTCCTTaGAAAACATATACATTTCACACACCTGAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TNSKPTGLPLLP*KTYTFHTPESS
Trigger: GGAGGACTCAGGTGTGTGAAATGTATATGTTTTCAAAGGAAGCAGTGGGAGGCCAGTTGGTTTTGAGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGTGTTTTAATAAGAGTTaGACGCACAAATTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLCFNKS*THKLAS
Trigger: GGAAGCCAATTTGTGCGTTCAACTCTTATTAAAACA...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCTGGAAGCTCTGTGCATaGTTATGCATACACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPWKLCA*LCIHSS
Trigger: GCTGCTGTGTATGCATAATCATGCACAGAGCTTCCA...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGAGGTGTGTAAACATATaGCGCTTGAAAGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: IIRATATRGSRKCGCQRERCVNI*RLKASR
Trigger: TCTGGAGGCTTTCAAGCGGCATATGTTTACACACCT...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCAGAAGTGATGTTGCCTaGGGAGACCAACTCAAAACC +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPRSDVA*GDQLKT
Trigger: GGTTTTGAGTTGGTCTCCGCAGGCAACATCACTTCT...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCCTGCAGACAGGGCTGGTGTTTCTCTTGTCCTTACACCTTTTCCATTTCACTGAAAACCTTTTATGACTaGTCCTTTCCCATTCTACCT +
Preference number: 4 (lower is better)
Translates to: PCRQGWCFSCPYTFSISLKTFYD*SFPILP
Trigger: AGGTAGAATGGGAAAGGAGCAGTCATAAAAGGTTTT...CAGTGAAATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCCTGTCTGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGAAGACTTGAGAGTTTATaGACATGTCACTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGRLESL*TCHCRF
Trigger: GAATCTGCAGTGACATGTGCATAAACTCTCAAGTCT...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTCTATCCTCTTTAAGGTaGCGATTGCCTTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSLSSLR*RLPFPG
Trigger: ACCAGGAAAAGGCAATCGCCACCTTAAAGAGGATAG...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGGACACAAAACCCTGTTaGTCCAGGTCATACTCTTGG +
Preference number: 4 (lower is better)
Translates to: IPCILTTCHVMICKRVLMDTKPC*SRSYSW
Trigger: CCAAGAGTATGACCTGGACCAACAGGGTTTTGTGTC...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGATCTTTCCCCACTCATTaGAAAGGAGATTATCACACT +
Preference number: 4 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGSFPTH*KGDYHT
Trigger: AGTGTGATAATCTCCTTTCCAATGAGTGGGGAAAGA...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCAAGATCTGGTCACACTaGACCCATGGTGGAACAACA +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPKIWSH*THGGTT
Trigger: TGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTT...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR TCA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGACCTTTTCCATTTCACTaGTTTACATGCCCTGAATTT +
Preference number: 4 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGPFPFH*FTCPEF
Trigger: AAATTCAGGGCATGTAAATCAGTGAAATGGAAAAGG...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp GTGTCACATGGGCCTGAGCCTGGACGGTATCTACAGAGAGATATTTTGGTTGTTACAAATTGGCTTCCTTaGAATGTTTACTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: VSHGPEPGRYLQRDILVVTNWLP*NVYFKQ
Trigger: CTGCTTGAAGTAAACATTGCAAGGAAGCCAATTTGT...AACAACCAAAATATCTCTCTGTAGATACCGTCCAGGCTCAGGCCCATGTGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCTCCCCCATCATGACCTaGACACCATTAGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPSPIMT*TPLEES
Trigger: ACTTTCTTCTAATGGTGTGCAGGTCATGATGGGGGA...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGTGCATACTGACCACTTaGCACGTTATGATCTGTAAG +
Preference number: 4 (lower is better)
Translates to: IIRATATRGSRKCGCQRECILTT*HVMICK
Trigger: CTTACAGATCATAACGTGGCAAGTGGTCAGTATGCA...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGGTTGTCCATCTAAAATaGGGTGTGAAAAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: IPCILTTCHVMICKRVLMVVHLK*GVKRSL
Trigger: GAGGGACCTTTTCACACCCCATTTTAGATGGACAAC...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR GCA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCCAACCAAAGCTGCACTaGAGATGCATTTTATTGAGC +
Preference number: 4 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPQPKLH*RCILLS
Trigger: GCTCAATAAAATGCATCTGCAGTGCAGCTTTGGTTG...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTTACAGAGAGATATTTTaGTTGTTCACTGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSYREIF*LFTEGL
Trigger: CAAACCCTCAGTGAACAACCAAAATATCTCTCTGTA...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp ATAATTAGAGCTACAGCCACACGTGGTTCAAGGAAATGTGGTTGTCAGAGAGAGACATATTCAGAAGTTTaGGTGCCTTTTGTGATAGCT +
Preference number: 4 (lower is better)
Translates to: IIRATATRGSRKCGCQRETYSEV*VPFVIA
Trigger: AGCTATCACAAAAGGCACCCAAACTTCTGAATATGT...CTCTCTCTGACAACCACATTTCCTTGAACCACGTGTGGCTGTAGCTCTAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CCA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTAAGGCAAAAAGAAGCTaGGTTCTTGATAACATTGTT +
Preference number: 4 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSKAKRS*VLDNIV
Trigger: AACAATGTTATCAAGAACCCAGCTTCTTTTTGCCTT...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 90 bp CAGCATCACCTGGGCGATGAACGGAGTGATGAGAGCACCCACTCTTaGCATGCCGCTGCAGGTGCCCAGGCCGAGGGCCCGCGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: QHHLGDERSDESTHS*HAAAGAQAEGPRCR
Trigger: ACGGCAACGCGGGCCCTCGGCCTGGGCACCTGCAGCGGCATGGCAAGAGTGGGTGCTCTCATCACTCCGTTCATCGCCCAGGTGATGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 90 bp CCTCGGCCGACCATCTCCTGGCCCCACTCCCGGTGGCTGGACTCCTaGAGTCCTCGGCCTTTGGTCTCAATGGGCAAAAAGCAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PRPTISWPHSRWLDS*SPRPLVSMGKKQEA
Trigger: GGCCTCCTGCTTTTTGCCCATTGAGACCAAAGGCCGAGGACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAGGAGATGGTCGGCCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CCA 90 bp GACCTGGTAACACCTGCACCGTGCATTCCTCGGCCGACCATCTCCTaGCCCCACTCCCGGTGGCTGGACTCCTGCAGTCCTCGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: DLVTPAPCIPRPTIS*PHSRWLDSCSPRPL
Trigger: CAAAGGCCGAGGACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAGGAGATGGTCGGCCGAGGAATGCACGGTGCAGGTGTTACCAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCGGCCGAGGGCCCGCGTaGCCGTGGGGTAGACCTCAG +
Preference number: 5 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLGRGPA*PWGRPQ
Trigger: CTGAGGTCTACCCCACGGCAACGCGGGCCCTCGGCC...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CCA 90 bp CGTGCATTCCTCGGCCGACCATCTCCTGGCCCCACTCCCGGTGGCTaGACTCCTGCAGTCCTCGGCCTTTGGTCTCAATGGGCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: RAFLGRPSPGPTPGG*TPAVLGLWSQWAKS
Trigger: GCTTTTTGCCCATTGAGACCAAAGGCCGAGGACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAGGAGATGGTCGGCCGAGGAATGCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 90 bp CATCGGTCACTATTCCTGAGAGCCAGAGTTCGACCTGGTAACACCTaGACCGTGCATTCCTCGGCCGACCATCTCCTGGCCCCACTCCCG +
Preference number: 5 (lower is better)
Translates to: HRSLFLRARVRPGNT*TVHSSADHLLAPLP
Trigger: CGGGAGTGGGGCCAGGAGATGGTCGGCCGAGGAATGCACGGTGCAGGTGTTACCAGGTCGAACTCTGGCTCTCAGGAATAGTGACCGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CCA 90 bp GGCACAGCTGCCCCATCATCCAGCTCCACAGCCTCTAGGCCCACGTaGACCCCTTCAATCTGGACTTCATGCTCTCCTGAAGCCGTGTCG +
Preference number: 5 (lower is better)
Translates to: GTAAPSSSSTASRPT*TPSIWTSCSPEAVS
Trigger: CGACACGGCTTCAGGAGAGCATGAAGTCCAGATTGAAGGGGTCCACGTGGGCCTAGAGGCTGTGGAGCTGGATGATGGGGCAGCTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000550436.4
ENST00000610966.5
CDS-3UTR CAA 90 bp GGGCATCACGAACACAGCCAGGACGACCTCGAACACTGTCCCGATGGCCCAGAATGTCGTCCTCTGACCTaGCACTCTCGCCTGTGCGAC +
Preference number: 5 (lower is better)
Translates to: GHHEHSQDDLEHCPDGPECRPLT*HSRLCD
Trigger: GTCGCACAGGCGAGAGTGCAAGGTCAGAGGACGACA...TTCTGGGCCATCGGGACAGTGTTCGAGGTCGTCCTGGCTGTGTTCGTGATGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CAA 90 bp CCAGCCCAGGCTGGGCATCACGAACACAGCCAGGACGACCTCGAACACTGTCCCCCACCATCAGTGGGATaGGCAAACTCCTTGGGCACA +
Preference number: 5 (lower is better)
Translates to: PAQAGHHEHSQDDLEHCPPPSVG*ANSLGT
Trigger: TGTGCCCAAGGAGTTTGCCAATCCCACTGATGGTGG...GGGACAGTGTTCGAGGTCGTCCTGGCTGTGTTCGTGATGCCCAGCCTGGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS GCA 90 bp CCGGCAGCTGCCTTAGCTGGAATAAGTCCTCCTCCATGTCCGCGCTaGGCCAGGATGAGCCCTTCTCATGGCCCTTACATGGTAGTGGTG +
Preference number: 5 (lower is better)
Translates to: PAAALAGISPPPCPR*ARMSPSHGPYMVVV
Trigger: CACCACTACCATGTAAGGGCCATGAGAAGGGCTCATCCTGGCGCAGCGCGGACATGGAGGAGGACTTATTCCAGCTAAGGCAGCTGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000550436.4
ENST00000610966.5
CDS CCA 90 bp CATGCCTACAAAGACCACCGAGGTCAGCAATGCCACCTGCCAGCTTaGGAGCCTCCACTCGCAATGCAGCTGTGGTGCCAGGATGCTGAG +
Preference number: 5 (lower is better)
Translates to: HAYKDHRGQQCHLPA*EPPLAMQLWCQDAE
Trigger: CTCAGCATCCTGGCACCACAGCTGCATTGCGAGTGGAGGCTCCCAAGCTGGCAGGTGGCATTGCTGACCTCGGTGGTCTTTGTAGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 90 bp TCCACAGCCTCTAGGCCCACGTGGACCCCTTCAATCTGGACTTCATaGTCTCCTGAAGCCGTGTCGTCCTCTGACCTTGCACTCTCGCCT +
Preference number: 5 (lower is better)
Translates to: STASRPTWTPSIWTS*SPEAVSSSDLALSP
Trigger: AGGCGAGAGTGCAAGGTCAGAGGACGACACGGCTTCAGGAGAGCATGAAGTCCAGATTGAAGGGGTCCACGTGGGCCTAGAGGCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000550436.4
ENST00000610966.5
CDS GCA 90 bp GAGGTCAGCAATGCCACCTGCCAGCTTGGGAGCCTCCACTCGCAATaGAGCTGTGGTGCCAGGATGCTGAGGATCATCATCTCCATGGCA +
Preference number: 5 (lower is better)
Translates to: EVSNATCQLGSLHSQ*SCGARMLRIIISMA
Trigger: TGCCATGGAGATGATGATCCTCAGCATCCTGGCACCACAGCTGCATTGCGAGTGGAGGCTCCCAAGCTGGCAGGTGGCATTGCTGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CCA 90 bp TCATCCAGCTCCACAGCCTCTAGGCCCACGTGGACCCCTTCAATCTaGACTTCATGCTCTCCTGAAGCCGTGTCGTCCTCTGACCTTGCA +
Preference number: 5 (lower is better)
Translates to: SSSSTASRPTWTPSI*TSCSPEAVSSSDLA
Trigger: TGCAAGGTCAGAGGACGACACGGCTTCAGGAGAGCATGAAGTCCAGATTGAAGGGGTCCACGTGGGCCTAGAGGCTGTGGAGCTGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000550436.4
ENST00000610966.5
CDS CCA 90 bp CAATGCCACCTGCCAGCTTGGGAGCCTCCACTCGCAATGCAGCTGTaGTGCCAGGATGCTGAGGATCATCATCTCCATGGCATCAGCCAT +
Preference number: 5 (lower is better)
Translates to: QCHLPAWEPPLAMQL*CQDAEDHHLHGISH
Trigger: ATGGCTGATGCCATGGAGATGATGATCCTCAGCATCCTGGCACCACAGCTGCATTGCGAGTGGAGGCTCCCAAGCTGGCAGGTGGCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp CAGCCAGGACGACCTCGAACACTGTCCCGATGGCCCAGAATACCTCAATCAGCAGGATTGGCAAACTCCTaGGGCACAGCTGCCCCATCA +
Preference number: 5 (lower is better)
Translates to: QPGRPRTLSRWPRIPQSAGLANS*GTAAPS
Trigger: TGATGGGGCAGCTGTGCCCAAGGAGTTTGCCAATCC...TGCTGATTGAGGTATTCTGGGCCATCGGGACAGTGTTCGAGGTCGTCCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS TCA 90 bp CTGCAGCCTCAAAGACCAGCTCAGTCCCCCATCGGTCACTATTCCTaGGAGCCAGAGTTCGACCTGGTAACACCTGCACCGTGCATTCCT +
Preference number: 5 (lower is better)
Translates to: LQPQRPAQSPIGHYS*EPEFDLVTPAPCIP
Trigger: AGGAATGCACGGTGCAGGTGTTACCAGGTCGAACTCTGGCTCTCAGGAATAGTGACCGATGGGGGACTGAGCTGGTCTTTGAGGCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 90 bp CACCAGGCCCCGGAGCACCAGGATCCAGCTATACACGGGCGCAAATaGACTAAGGATGCCATAGTACAGAGTCCACAGCACGCTGATCTT +
Preference number: 5 (lower is better)
Translates to: HQAPEHQDPAIHGRK*TKDAIVQSPQHADL
Trigger: AAGATCAGCGTGCTGTGGACTCTGTACTATGGCATCCTTAGTGCATTTGCGCCCGTGTATAGCTGGATCCTGGTGCTCCGGGGCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546618.2
ENST00000550436.4
ENST00000610966.5
CDS CCA 90 bp CATCATGCCTACAAAGACCACCATCAGTGGGATTGGCAAACTCCTTaGGCACAGCTGCCCCATCATCCAGCTCCACAGCCTCTAGGCCCA +
Preference number: 5 (lower is better)
Translates to: HHAYKDHHQWDWQTP*AQLPHHPAPQPLGP
Trigger: TGGGCCTAGAGGCTGTGGAGCTGGATGATGGGGCAGCTGTGCCCAAGGAGTTTGCCAATCCCACTGATGGTGGTCTTTGTAGGCATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CAA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCAACGGCGTTCTGAGGTaGTCACCTGGTGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLNGVLR*SPGARP
Trigger: TGGTCTTGCACCAGGTGACAACCTCAGAACGCCGTT...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 90 bp CATGTAATCCTCCTCACTCAGGTACTCGCAGGCCAGGCTGCATTTTaGCTCTACAGCCTTCTTCCGACTGGAGATGCCGCAGACATCTCC +
Preference number: 5 (lower is better)
Translates to: HVILLTQVLAGQAAF*LYSLLPTGDAADIS
Trigger: GGAGATGTCTGCGGCATCTCCAGTCGGAAGAAGGCTGTAGAGGCAAAATGCAGCCTGGCCTGCGAGTACCTGAGTGAGGAGGATTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 90 bp GCAAGTCCATGTAATCCTCCTCACTCAGGTACTCGCAGGCCAGGCTaGATTTTGCCTCTACAGCCTTCTTCCGACTGGAGATGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: ASPCNPPHSGTRRPG*ILPLQPSSDWRCRR
Trigger: TCTGCGGCATCTCCAGTCGGAAGAAGGCTGTAGAGGCAAAATGCAGCCTGGCCTGCGAGTACCTGAGTGAGGAGGATTACATGGACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAATGTCGTCCTCTGACCTaGCACTCTCGCCTGTGCGAC +
Preference number: 5 (lower is better)
Translates to: IYREPPRANISPSLGGPQCRPLT*HSRLCD
Trigger: GTCGCACAGGCGAGAGTGCAAGGTCAGAGGACGACA...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp CAGGTCATACTCTTGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGTGCCCCAATGCCACCTGCCAGCTaGGGAGCCTCCACTCGCAAT +
Preference number: 5 (lower is better)
Translates to: QVILLGEFLMSAVTISAPMPPAS*GASTRN
Trigger: ATTGCGAGTGGAGGCTCCCAAGCTGGCAGGTGGCAT...TGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTAAGGCCAGGCTGCATTTaGCCTCTACAGCCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SNCLHHPAKGQANATVSVRPGCI*PLQPSS
Trigger: GGAAGAAGGCTGTAGAGGCAAAATGCAGCCTGGCCT...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGAGGGCCATGGTCTTCTaGCGCCCCAGGCGGTCAATA +
Preference number: 5 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQRAMVF*RPRRSI
Trigger: TATTGACCGCCTGGGGCGCAAGAAGACCATGGCCCT...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCAGACAGGAGAATTGCTaGAACCCGGGAGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLRQENC*NPGGRV
Trigger: AACTCTGCCTCCCGGGTTCAAGCAATTCTCCTGTCT...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAATCCACGGCAGGCTCCTaGCAACCATCGCCCATCCAA +
Preference number: 5 (lower is better)
Translates to: IYREPPRANISPSLGGPQSTAGS*QPSPIQ
Trigger: TTGGATGGGCGATGGTTGCAAGGAGCCTGCCGTGGA...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CCA 90 bp GCCCTGTTTTCCTGCCGTACTGGTCTGAGATATTTCCCCAGAGCGTaGAGCTGGACATCATGCCTACAAAGACCACCGAGGTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: ALFSCRTGLRYFPRA*SWTSCLQRPPRSAM
Trigger: CATTGCTGACCTCGGTGGTCTTTGTAGGCATGATGTCCAGCTCCACGCTCTGGGGAAATATCTCAGACCAGTACGGCAGGAAAACAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp CAGGTCATACTCTTGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGTGCCCCAGGATTGGCAAACTCCTaGGGCACAGCTGCCCCATCA +
Preference number: 5 (lower is better)
Translates to: QVILLGEFLMSAVTISAPGLANS*GTAAPS
Trigger: TGATGGGGCAGCTGTGCCCAAGGAGTTTGCCAATCC...TGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCGTATCATCAGTGGGATaGGCAAACTCCTTGGGCACA +
Preference number: 5 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLVSSVG*ANSLGT
Trigger: TGTGCCCAAGGAGTTTGCCAATCCCACTGATGATAC...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp ATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTACCTCCTCTTGGGTGAGTTCTaGATGTCGGCAGTGACAATC +
Preference number: 5 (lower is better)
Translates to: IVCTTLLKGRPMPPCLYLLLGEF*MSAVTI
Trigger: GATTGTCACTGCCGACATCAAGAACTCACCCAAGAG...GAGGTACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGCTGAGACAGGAGAATaGCTTGAACCCGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQAETGE*LEPGRQ
Trigger: CTGCCTCCCGGGTTCAAGCAATTCTCCTGTCTCAGC...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTAATCCCAGAAGTGATGTaGCCTGCGGAGACCAACTCA +
Preference number: 5 (lower is better)
Translates to: SNCLHHPAKGQANATVSVIPEVM*PAETNS
Trigger: TGAGTTGGTCTCCGCAGGCAACATCACTTCTGGGAT...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTCAGCTTCCTCCCTCCTaGTCTATGTCCCCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPQLPPS*SMSPAF
Trigger: GAAGGCAGGGGACATAGACAAGGAGGGAGGAAGCTG...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS TCA 90 bp CCACAGCACGCTGATCTTCAGCCCTGTTTTCCTGCCGTACTGGTCTaGGATATTTCCCCAGAGCGTGGAGCTGGACATCATGCCTACAAA +
Preference number: 5 (lower is better)
Translates to: PQHADLQPCFPAVLV*DISPERGAGHHAYK
Trigger: TTTGTAGGCATGATGTCCAGCTCCACGCTCTGGGGAAATATCTCAGACCAGTACGGCAGGAAAACAGGGCTGAAGATCAGCGTGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546618.2
ENST00000550436.4
ENST00000610966.5
CDS CCA 90 bp GCCCTGTTTTCCTGCCGTACTGGTCTGAGATATTTCCCCAGAGCGTaGAGCTGGACATCATGCCTACAAAGACCACCATCAGTGGGATTG +
Preference number: 5 (lower is better)
Translates to: ALFSCRTGLRYFPRA*SWTSCLQRPPSVGL
Trigger: CAATCCCACTGATGGTGGTCTTTGTAGGCATGATGTCCAGCTCCACGCTCTGGGGAAATATCTCAGACCAGTACGGCAGGAAAACAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS-3UTR CAA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAATGTCTGCTCTGGCCTTaGATGGGATCTGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: IYREPPRANISPSLGGPQCLLWP*MGSASF
Trigger: GAAGCTGGCAGATCCCATCAAAGGCCAGAGCAGACA...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACAACAGAATCCCAATTTaGTGTTCAGGAGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNNRIPI*CSGGCG
Trigger: CCCACAGCCTCCTGAACACAAAATTGGGATTCTGTT...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp ACAGTGCTGATGAGAGCTCTGTGGCCTACACATCCACGGCAGGCTCCTTGCAACGGGCTGGTGTTTCTCTaGTCCTTACACCTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: TVLMRALWPTHPRQAPCNGLVFL*SLHLFH
Trigger: ATGGAAAAGGTGTAAGGACAAGAGAAACACCAGCCC...GTTGCAAGGAGCCTGCCGTGGATGTGTAGGCCACAGAGCTCTCATCAGCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTTGCAGTCCTCGGCCTTaGGTCTCAATGGGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPCSPRP*VSMGKK
Trigger: CTTTTTGCCCATTGAGACCAAAGGCCGAGGACTGCA...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAATCTTTAAGGTGGCGATaGCCTTTTCCTGGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: IYREPPRANISPSLGGPQSLRWR*PFPGSL
Trigger: CAGGGAACCAGGAAAAGGCAATCGCCACCTTAAAGA...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp AGCAATTGTCTGCACCACCCTGCTAAAGGGCAGGCCAATGCCACCGTGTCTGTAGTCTTTCCCCACTCATaGGAAAGGAGATTATCACAC +
Preference number: 5 (lower is better)
Translates to: SNCLHHPAKGQANATVSVVFPHS*ERRLSH
Trigger: GTGTGATAATCTCCTTTCCAATGAGTGGGGAAAGAC...TACAGACACGGTGGCATTGGCCTGCCCTTTAGCAGGGTGGTGCAGACAATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp TGCCTTTGTGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGAGACACAAAACCCTGTaGGTCCAGGTCATACTCTTG +
Preference number: 5 (lower is better)
Translates to: CLCVMIKTSLDRGAASHQRHKTL*VQVILL
Trigger: CAAGAGTATGACCTGGACCAACAGGGTTTTGTGTCT...CTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACACAAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGAGTGGTGTCTGATTGGTaGCTGGCATTACCAGACCCT +
Preference number: 5 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGVVSDW*LALPDP
Trigger: AGGGTCTGGTAATGCCAGCAACCAATCAGACACCAC...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAATGCTCTGACTTCAGCTaGATTCACTTTGGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: IYREPPRANISPSLGGPQCSDFS*IHFGLS
Trigger: ACTGAGGCCAAAGTGAATCAAGCTGAAGTCAGAGCA...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGAACAGCACATCATACCTaGCACTTTCAGGCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGTAHHT*HFQAAR
Trigger: TCTGGCTGCCTGAAAGTGCAAGGTATGATGTGCTGT...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp ATATACAGAGAACCCCCTAGAGCAAACATCTCCCCATCCCTGGGTGGACCTCAACCTGACCCAATTGAATaGGACCAAGACTCAATCCAA +
Preference number: 5 (lower is better)
Translates to: IYREPPRANISPSLGGPQPDPIE*DQDSIQ
Trigger: TTGGATTGAGTCTTGGTCCAATTCAATTGGGTCAGG...TTGAGGTCCACCCAGGGATGGGGAGATGTTTGCTCTAGGGGGTTCTCTGTATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS TCA 90 bp GACTGGAGATGCCGCAGACATCTCCTGCCTGGAAGAGTTCTGTGGTaGGTAGAACTAACCCGTAGTAAGAGAATGCATTGGAAAACCATA +
Preference number: 5 (lower is better)
Translates to: DWRCRRHLLPGRVLW*VELTRSKRMHWKTI
Trigger: TATGGTTTTCCAATGCATTCTCTTACTACGGGTTAGTTCTACTCACCACAGAACTCTTCCAGGCAGGAGATGTCTGCGGCATCTCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGAGAGCTCCGTTTTCAGTaGCTATCCTCTTTAAGGTGG +
Preference number: 5 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGELRFQ*LSSLRW
Trigger: CCACCTTAAAGAGGATAGCAACTGAAAACGGAGCTC...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTCTCCAGGGGCTGCCTTaGTGTAATGATCAAGACGTC +
Preference number: 5 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSLQGLP*CNDQDV
Trigger: GACGTCTTGATCATTACACAAAGGCAGCCCCTGGAG...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTAGCTCAGCCACAATGTaGGCTGCCAACGGTATGTCT +
Preference number: 5 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSSSATM*AANGMS
Trigger: AGACATACCGTTGGCAGCCAACATTGTGGCTGAGCT...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGATGGCAGGGGAGACTCTaGATCTTATCATTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGWQGRL*ILSFKA
Trigger: AGCCTTGAATGATAAGATCAAGAGTCTCCCCTGCCA...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp CTTGAGAGTTTATGCACATGTCACTGCAGATTCCAGGCATACCAGCAATTGTCTACACATCTGGATCTCTaGGTGCCAACAACGGCAACT +
Preference number: 5 (lower is better)
Translates to: LESLCTCHCRFQAYQQLSTHLDL*VPTTAT
Trigger: AGTTGCCGTTGTTGGCACCAAGAGATCCAGATGTGT...AGACAATTGCTGGTATGCCTGGAATCTGCAGTGACATGTGCATAAACTCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp TGTAATGATCAAGACGTCCCTGGACAGAGGAGCAGCTTCGCATCAGGGAATCCTCACAAATTGGCTTCCTaGCAATGTTTACTTCAAGCA +
Preference number: 5 (lower is better)
Translates to: CNDQDVPGQRSSFASGNPHKLAS*QCLLQA
Trigger: TGCTTGAAGTAAACATTGCAAGGAAGCCAATTTGTG...AGGATTCCCTGATGCGAAGCTGCTCCTCTGTCCAGGGACGTCTTGATCATTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCAAAAGGTCCCTCATTTaGCCTCGGTCTTCCTGTCTG +
Preference number: 5 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPKRSLI*PRSSCL
Trigger: CAGACAGGAAGACCGAGGCAAAATGAGGGACCTTTT...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCGTCCAGGTCATACTCTaGGGTGAGTTCTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPVQVIL*GEFLMS
Trigger: CGACATCAAGAACTCACCCAAGAGTATGACCTGGAC...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGGCATGTGGCTCCAGTTaGAATGCACCATGTCCATCT +
Preference number: 5 (lower is better)
Translates to: IPCILTTCHVMICKRVLMACGSS*NAPCPS
Trigger: AGATGGACATGGTGCATTCAAACTGGAGCCACATGC...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp CAGGTCATACTCTTGGGTGAGTTCTTGATGTCGGCAGTGACAATCAGTGCCCCACCCATTCTACCTTCTTaGAAAAGAAATATGATGTCC +
Preference number: 5 (lower is better)
Translates to: QVILLGEFLMSAVTISAPPILPS*KRNMMS
Trigger: GGACATCATATTTCTTTTCAAAGAAGGTAGAATGGG...TGGGGCACTGATTGTCACTGCCGACATCAAGAACTCACCCAAGAGTATGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGATTTGCATCCTCAGTGTaGAATAACATGTCCAGGACA +
Preference number: 5 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGFASSV*NNMSRT
Trigger: TGTCCTGGACATGTTATTCAACACTGAGGATGCAAA...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 90 bp AACAGACAGCTTCCACTGAAATTTTCCAAAGCCAATGGCTTCCACTaGATCTTCCACCATGAAAGTATCATCAGTGGGATTGGCAAACTC +
Preference number: 5 (lower is better)
Translates to: NRQLPLKFSKANGFH*IFHHESIISGIGKL
Trigger: GAGTTTGCCAATCCCACTGATGATACTTTCATGGTGGAAGATGCAGTGGAAGCCATTGGCTTTGGAAAATTTCAGTGGAAGCTGTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000610966.5
CDS-3UTR CAA 90 bp GAACATTGTAAGATCTGGTCACACTGGACCCATGGTGGAACAACATCAGCTGGATGGTTTAAGCCACTATaGACTGAGATTACTGTTCTT +
Preference number: 5 (lower is better)
Translates to: EHCKIWSHWTHGGTTSAGWFKPL*TEITVL
Trigger: AAGAACAGTAATCTCAGTCAATAGTGGCTTAAACCA...TCCAGCTGATGTTGTTCCACCATGGGTCCAGTGTGACCAGATCTTACAATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCGTAAACATATGCCGCTaGAAAGCCTCCAGAAATAAA +
Preference number: 5 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPVNICR*KASRNK
Trigger: TTTATTTCTGGAGGCTTTCAAGCGGCATATGTTTAC...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp ATTCCATGCATACTGACCACTTGCCACGTTATGATCTGTAAGAGAGTTCTGATGAATAAACTTAGGCTCTaGCAATGTCCATCACTGACA +
Preference number: 5 (lower is better)
Translates to: IPCILTTCHVMICKRVLMNKLRL*QCPSLT
Trigger: TGTCAGTGATGGACATTGCAAGAGCCTAAGTTTATT...CATCAGAACTCTCTTACAGATCATAACGTGGCAAGTGGTCAGTATGCATGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS-3UTR CAA 90 bp CCATGTAGATCCACAGGTTATGAACAAAGCTTTCACCACATATACAGAGAACCCAAAGAAGCTGGGTTCTaGATAACATTGTTGAGCGTT +
Preference number: 5 (lower is better)
Translates to: PCRSTGYEQSFHHIYREPKEAGF*ITLLSV
Trigger: AACGCTCAACAATGTTATCAAGAACCCAGCTTCTTT...GGGTTCTCTGTATATGTGGTGAAAGCTTTGTTCATAACCTGTGGATCTACATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 72 bp CTGGGCGATGAACGGAGTGATGAGAGCACCCACTCTTaGCATGCCGCTGCAGGTGCCCAGGCCGAGGGCCCG +
Preference number: 6 (lower is better)
Translates to: LGDERSDESTHS*HAAAGAQAEGP
Trigger: CGGGCCCTCGGCCTGGGCACCTGCAGCGGCATGGCAAGAGTGGGTGCTCTCATCACTCCGTTCATCGCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CCA 72 bp CTCGGCCGACCATCTCCTGGCCCCACTCCCGGTGGCTaGACTCCTGCAGTCCTCGGCCTTTGGTCTCAATGG +
Preference number: 6 (lower is better)
Translates to: LGRPSPGPTPGG*TPAVLGLWSQW
Trigger: CCATTGAGACCAAAGGCCGAGGACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAGGAGATGGTCGGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CCA 72 bp ACACCTGCACCGTGCATTCCTCGGCCGACCATCTCCTaGCCCCACTCCCGGTGGCTGGACTCCTGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: TPAPCIPRPTIS*PHSRWLDSCSP
Trigger: AGGACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAGGAGATGGTCGGCCGAGGAATGCACGGTGCAGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CAA 90 bp TCCTGGCCCCACTCCCGGTGGCTGGACTCCTGCAGTCCTCGGCCTTaGGTCTCAATGGGCAAAAAGCAGGAGGCCAGGGCAGCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: SWPHSRWLDSCSPRP*VSMGKKQEARAARR
Trigger: CCTCCTGGCTGCCCTGGCCTCCTGCTTTTTGCCCATTGAGACCAAAGGCCGAGGACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 72 bp CATGCCGCTGCAGGTGCCCAGGCCGAGGGCCCGCGTTaGCGTGGGGTAGACCTCAGGTGTGTAAACATATGC +
Preference number: 6 (lower is better)
Translates to: HAAAGAQAEGPR*RGVDLRCVNIC
Trigger: GCATATGTTTACACACCTGAGGTCTACCCCACGGCAACGCGGGCCCTCGGCCTGGGCACCTGCAGCGGCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CAA 72 bp CCATGCCGCTGCAGGTGCCCAGGCCGAGGGCCCGCGTaGCCGTGGGGTAGACCTCAGGTGTGTAAACATATG +
Preference number: 6 (lower is better)
Translates to: PCRCRCPGRGPA*PWGRPQVCKHM
Trigger: CATATGTTTACACACCTGAGGTCTACCCCACGGCAACGCGGGCCCTCGGCCTGGGCACCTGCAGCGGCATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CCA 72 bp ACTCCCGGTGGCTGGACTCCTGCAGTCCTCGGCCTTTaGTCTCAATGGGCAAAAAGCAGGAGGCCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: TPGGWTPAVLGL*SQWAKSRRPGQ
Trigger: CTGCCCTGGCCTCCTGCTTTTTGCCCATTGAGACCAAAGGCCGAGGACTGCAGGAGTCCAGCCACCGGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 72 bp ACCATCTCCTGGCCCCACTCCCGGTGGCTGGACTCCTaGAGTCCTCGGCCTTTGGTCTCAATGGGCAAAAAG +
Preference number: 6 (lower is better)
Translates to: TISWPHSRWLDS*SPRPLVSMGKK
Trigger: CTTTTTGCCCATTGAGACCAAAGGCCGAGGACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAGGAGATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CCA 72 bp AAAGACCACCGAGGTCAGCAATGCCACCTGCCAGCTTaGGAGCCTCCACTCGCAATGCAGCTGTGGTGCCAG +
Preference number: 6 (lower is better)
Translates to: KDHRGQQCHLPA*EPPLAMQLWCQ
Trigger: CTGGCACCACAGCTGCATTGCGAGTGGAGGCTCCCAAGCTGGCAGGTGGCATTGCTGACCTCGGTGGTCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CAA 72 bp CAAAGACCACCGAGGTCAGCAATGCCACCTGCCAGCTaGGGAGCCTCCACTCGCAATGCAGCTGTGGTGCCA +
Preference number: 6 (lower is better)
Translates to: QRPPRSAMPPAS*GASTRNAAVVP
Trigger: TGGCACCACAGCTGCATTGCGAGTGGAGGCTCCCAAGCTGGCAGGTGGCATTGCTGACCTCGGTGGTCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS TCA 72 bp GAGCCCTTCTCATGGCCCTTACATGGTAGTGGTGGATaGCGAGCCCTCCGGTTTTCAGCACCGGGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: EPFSWPLHGSGG*RALRFSAPGSW
Trigger: CCAGCTTCCCGGTGCTGAAAACCGGAGGGCTCGTCATCCACCACTACCATGTAAGGGCCATGAGAAGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000550436.4
ENST00000610966.5
CDS GCA 72 bp CTATTCCTGAGAGCCAGAGTTCGACCTGGTAACACCTaGACCGTGCATTCCTCGGCCGACCATCTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: LFLRARVRPGNT*TVHSSADHLLA
Trigger: GGCCAGGAGATGGTCGGCCGAGGAATGCACGGTGCAGGTGTTACCAGGTCGAACTCTGGCTCTCAGGAATAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CCA 72 bp GTGCGACGGAATTTCACAACCGGCAGCTGCCTTAGCTaGAATAAGTCCTCCTCCATGTCCGCGCTGCGCCAG +
Preference number: 6 (lower is better)
Translates to: VRRNFTTGSCLS*NKSSSMSALRQ
Trigger: CTGGCGCAGCGCGGACATGGAGGAGGACTTATTCCAGCTAAGGCAGCTGCCGGTTGTGAAATTCCGTCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000550436.4
ENST00000610966.5
CDS CCA 72 bp CTGCCAGCTTGGGAGCCTCCACTCGCAATGCAGCTGTaGTGCCAGGATGCTGAGGATCATCATCTCCATGGC +
Preference number: 6 (lower is better)
Translates to: LPAWEPPLAMQL*CQDAEDHHLHG
Trigger: GCCATGGAGATGATGATCCTCAGCATCCTGGCACCACAGCTGCATTGCGAGTGGAGGCTCCCAAGCTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CAA 72 bp CCTCCTCACTCAGGTACTCGCAGGCCAGGCTGCATTTaGCCTCTACAGCCTTCTTCCGACTGGAGATGCCGC +
Preference number: 6 (lower is better)
Translates to: PPHSGTRRPGCI*PLQPSSDWRCR
Trigger: GCGGCATCTCCAGTCGGAAGAAGGCTGTAGAGGCAAAATGCAGCCTGGCCTGCGAGTACCTGAGTGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CAA 90 bp CAATCTGGACTTCATGCTCTCCTGAAGCCGTGTCGTCCTCTGACCTaGCACTCTCGCCTGTGCGACGGAATTTCACAACCGGCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: QSGLHALLKPCRPLT*HSRLCDGISQPAAA
Trigger: GGCAGCTGCCGGTTGTGAAATTCCGTCGCACAGGCGAGAGTGCAAGGTCAGAGGACGACACGGCTTCAGGAGAGCATGAAGTCCAGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000550436.4
ENST00000610966.5
CDS GCA 72 bp GCCTTAGCTGGAATAAGTCCTCCTCCATGTCCGCGCTaGGCCAGGATGAGCCCTTCTCATGGCCCTTACATG +
Preference number: 6 (lower is better)
Translates to: ALAGISPPPCPR*ARMSPSHGPYM
Trigger: CATGTAAGGGCCATGAGAAGGGCTCATCCTGGCGCAGCGCGGACATGGAGGAGGACTTATTCCAGCTAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000550436.4
ENST00000610966.5
CDS GCA 72 bp AAGCCGTGTCGTCCTCTGACCTTGCACTCTCGCCTGTaGGACGGAATTTCACAACCGGCAGCTGCCTTAGCT +
Preference number: 6 (lower is better)
Translates to: KPCRPLTLHSRL*DGISQPAAALA
Trigger: AGCTAAGGCAGCTGCCGGTTGTGAAATTCCGTCGCACAGGCGAGAGTGCAAGGTCAGAGGACGACACGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000550436.4
ENST00000610966.5
CDS GCA 72 bp AATGCCACCTGCCAGCTTGGGAGCCTCCACTCGCAATaGAGCTGTGGTGCCAGGATGCTGAGGATCATCATC +
Preference number: 6 (lower is better)
Translates to: NATCQLGSLHSQ*SCGARMLRIII
Trigger: GATGATGATCCTCAGCATCCTGGCACCACAGCTGCATTGCGAGTGGAGGCTCCCAAGCTGGCAGGTGGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 72 bp CTCCTCACTCAGGTACTCGCAGGCCAGGCTGCATTTTaGCTCTACAGCCTTCTTCCGACTGGAGATGCCGCA +
Preference number: 6 (lower is better)
Translates to: LLTQVLAGQAAF*LYSLLPTGDAA
Trigger: TGCGGCATCTCCAGTCGGAAGAAGGCTGTAGAGGCAAAATGCAGCCTGGCCTGCGAGTACCTGAGTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CCA 72 bp TCCACAGCCTCTAGGCCCACGTGGACCCCTTCAATCTaGACTTCATGCTCTCCTGAAGCCGTGTCGTCCTCT +
Preference number: 6 (lower is better)
Translates to: STASRPTWTPSI*TSCSPEAVSSS
Trigger: AGAGGACGACACGGCTTCAGGAGAGCATGAAGTCCAGATTGAAGGGGTCCACGTGGGCCTAGAGGCTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000550436.4
ENST00000610966.5
CDS CCA 72 bp GCCCCATCATCCAGCTCCACAGCCTCTAGGCCCACGTaGACCCCTTCAATCTGGACTTCATGCTCTCCTGAA +
Preference number: 6 (lower is better)
Translates to: APSSSSTASRPT*TPSIWTSCSPE
Trigger: TTCAGGAGAGCATGAAGTCCAGATTGAAGGGGTCCACGTGGGCCTAGAGGCTGTGGAGCTGGATGATGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000550436.4
ENST00000610966.5
CDS CAA 90 bp ACATCATGCCTACAAAGACCACCATCAGTGGGATTGGCAAACTCCTaGGGCACAGCTGCCCCATCATCCAGCTCCACAGCCTCTAGGCCC +
Preference number: 6 (lower is better)
Translates to: TSCLQRPPSVGLANS*GTAAPSSSSTASRP
Trigger: GGGCCTAGAGGCTGTGGAGCTGGATGATGGGGCAGCTGTGCCCAAGGAGTTTGCCAATCCCACTGATGGTGGTCTTTGTAGGCATGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS TCA 72 bp CAAAGACCAGCTCAGTCCCCCATCGGTCACTATTCCTaGGAGCCAGAGTTCGACCTGGTAACACCTGCACCG +
Preference number: 6 (lower is better)
Translates to: QRPAQSPIGHYS*EPEFDLVTPAP
Trigger: CGGTGCAGGTGTTACCAGGTCGAACTCTGGCTCTCAGGAATAGTGACCGATGGGGGACTGAGCTGGTCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 72 bp TCTAGGCCCACGTGGACCCCTTCAATCTGGACTTCATaGTCTCCTGAAGCCGTGTCGTCCTCTGACCTTGCA +
Preference number: 6 (lower is better)
Translates to: SRPTWTPSIWTS*SPEAVSSSDLA
Trigger: TGCAAGGTCAGAGGACGACACGGCTTCAGGAGAGCATGAAGTCCAGATTGAAGGGGTCCACGTGGGCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000550436.4
ENST00000610966.5
CDS CAA 72 bp CTTCATGCTCTCCTGAAGCCGTGTCGTCCTCTGACCTaGCACTCTCGCCTGTGCGACGGAATTTCACAACCG +
Preference number: 6 (lower is better)
Translates to: LHALLKPCRPLT*HSRLCDGISQP
Trigger: CGGTTGTGAAATTCCGTCGCACAGGCGAGAGTGCAAGGTCAGAGGACGACACGGCTTCAGGAGAGCATGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000550436.4
ENST00000610966.5
CDS CAA 90 bp GCATCTTCCACCATGAAAGTATCATCAGTGGGATTGGCAAACTCCTaGGGCACAGCTGCCCCATCATCCAGCTCCACAGCCTCTAGGCCC +
Preference number: 6 (lower is better)
Translates to: ASSTMKVSSVGLANS*GTAAPSSSSTASRP
Trigger: GGGCCTAGAGGCTGTGGAGCTGGATGATGGGGCAGCTGTGCCCAAGGAGTTTGCCAATCCCACTGATGATACTTTCATGGTGGAAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000610966.5
CDS CAA 90 bp CCATGTAATCCTCCTCACTCAGGTACTCGCAGGCCAGGCTGCATTTaGCCTCTACAGCCTTCTTCCGACTGGAGATGCCGCAGACATCTC +
Preference number: 6 (lower is better)
Translates to: PCNPPHSGTRRPGCI*PLQPSSDWRCRRHL
Trigger: GAGATGTCTGCGGCATCTCCAGTCGGAAGAAGGCTGTAGAGGCAAAATGCAGCCTGGCCTGCGAGTACCTGAGTGAGGAGGATTACATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 72 bp CCGGAGCACCAGGATCCAGCTATACACGGGCGCAAATaGACTAAGGATGCCATAGTACAGAGTCCACAGCAC +
Preference number: 6 (lower is better)
Translates to: PEHQDPAIHGRK*TKDAIVQSPQH
Trigger: GTGCTGTGGACTCTGTACTATGGCATCCTTAGTGCATTTGCGCCCGTGTATAGCTGGATCCTGGTGCTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546618.2
ENST00000550436.4
ENST00000610966.5
CDS GCA 72 bp CTGAGATATTTCCCCAGAGCGTGGAGCTGGACATCATaGCTACAAAGACCACCGAGGTCAGCAATGCCACCT +
Preference number: 6 (lower is better)
Translates to: LRYFPRAWSWTS*LQRPPRSAMPP
Trigger: AGGTGGCATTGCTGACCTCGGTGGTCTTTGTAGGCATGATGTCCAGCTCCACGCTCTGGGGAAATATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 72 bp TGTAATCCTCCTCACTCAGGTACTCGCAGGCCAGGCTaGATTTTGCCTCTACAGCCTTCTTCCGACTGGAGA +
Preference number: 6 (lower is better)
Translates to: CNPPHSGTRRPG*ILPLQPSSDWR
Trigger: TCTCCAGTCGGAAGAAGGCTGTAGAGGCAAAATGCAGCCTGGCCTGCGAGTACCTGAGTGAGGAGGATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS TCA 72 bp GCTGATCTTCAGCCCTGTTTTCCTGCCGTACTGGTCTaGGATATTTCCCCAGAGCGTGGAGCTGGACATCAT +
Preference number: 6 (lower is better)
Translates to: ADLQPCFPAVLV*DISPERGAGHH
Trigger: ATGATGTCCAGCTCCACGCTCTGGGGAAATATCTCAGACCAGTACGGCAGGAAAACAGGGCTGAAGATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546618.2
ENST00000550436.4
ENST00000610966.5
CDS GCA 72 bp CTGAGATATTTCCCCAGAGCGTGGAGCTGGACATCATaGCTACAAAGACCACCATCAGTGGGATTGGCAAAC +
Preference number: 6 (lower is better)
Translates to: LRYFPRAWSWTS*LQRPPSVGLAN
Trigger: GTTTGCCAATCCCACTGATGGTGGTCTTTGTAGGCATGATGTCCAGCTCCACGCTCTGGGGAAATATCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550436.4
CDS TCA 72 bp TGCCGCAGACATCTCCTGCCTGGAAGAGTTCTGTGGTaGGTAGAACTAACCCGTAGTAAGAGAATGCATTGG +
Preference number: 6 (lower is better)
Translates to: CRRHLLPGRVLW*VELTRSKRMHW
Trigger: CCAATGCATTCTCTTACTACGGGTTAGTTCTACTCACCACAGAACTCTTCCAGGCAGGAGATGTCTGCGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CAA 90 bp GCATGGGAGCTCCGTTTTCAGTTGCTATCCTCTTTAAGGTGGCGATaGCCTTTTCCTGGTTCCCTGACAGCACATCATACCTTGCACTTT +
Preference number: 6 (lower is better)
Translates to: AWELRFQLLSSLRWR*PFPGSLTAHHTLHF
Trigger: AAAGTGCAAGGTATGATGTGCTGTCAGGGAACCAGGAAAAGGCAATCGCCACCTTAAAGAGGATAGCAACTGAAAACGGAGCTCCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS CCA 72 bp CCAAAACAGGGCACAGGGAGTGGAAAGGGGTCAAAGTaGTCAACAAACAGCTCTTACCATATAAACCACAGC +
Preference number: 6 (lower is better)
Translates to: PKQGTGSGKGSK*STNSSYHINHS
Trigger: GCTGTGGTTTATATGGTAAGAGCTGTTTGTTGACCACTTTGACCCCTTTCCACTCCCTGTGCCCTGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551211.1
CDS CAA 72 bp CTCCGTTTTCAGTTGCTATCCTCTTTAAGGTGGCGATaGCCTTTTCCTGGTTCCCTGACAGCACATCATACC +
Preference number: 6 (lower is better)
Translates to: LRFQLLSSLRWR*PFPGSLTAHHT
Trigger: GGTATGATGTGCTGTCAGGGAACCAGGAAAAGGCAATCGCCACCTTAAAGAGGATAGCAACTGAAAACGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610966.5
CDS GCA 72 bp CTTCCACTGAAATTTTCCAAAGCCAATGGCTTCCACTaGATCTTCCACCATGAAAGTATCATCAGTGGGATT +
Preference number: 6 (lower is better)
Translates to: LPLKFSKANGFH*IFHHESIISGI
Trigger: AATCCCACTGATGATACTTTCATGGTGGAAGATGCAGTGGAAGCCATTGGCTTTGGAAAATTTCAGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546618.2
ENST00000548229.2
ENST00000610966.5