Pregenerated sensors for SVBP (Homo sapiens)

Ensembl gene IDs: ENSG00000177868

Ensembl transcript IDs: ENST00000372521.9, ENST00000372522.5, ENST00000497437.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GCTCTCAGGGGGTCTGCCTCTGCTCTTTGTCTCTGCTTCAGCTCCTaGTGGGCTGATTTCTGTTTGGCCTTCTCAACTCTGCTGACAGAT	+
Preference number: 5 (lower is better) Translates to: ALRGSASALCLCFSS*WADFCLAFSTLLTD Trigger: ATCTGTCAGCAGAGTTGAGAAGGCCAAACAGAAATCAGCCCAGCAGGAGCTGAAGCAGAGACAAAGAGCAGAGGCAGACCCCCTGAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000497437.1
CDS CCA 72 bp	GAGGCTCTGATCTTTCCCGACCGGGCCACTGGAAGTTaGAGCCTCCGCCGAGTCGCAGACAACGCCTCCGGG	+
Preference number: 6 (lower is better) Translates to: EALIFPDRATGS*SLRRVADNASG Trigger: CCCGGAGGCGTTGTCTGCGACTCGGCGGAGGCTCCAACTTCCAGTGGCCCGGTCGGGAAAGATCAGAGCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372521.9 ENST00000497437.1
CDS CAA 72 bp	GGAGGCTCTGATCTTTCCCGACCGGGCCACTGGAAGTaGGAGCCTCCGCCGAGTCGCAGACAACGCCTCCGG	+
Preference number: 6 (lower is better) Translates to: GGSDLSRPGHWK*EPPPSRRQRLR Trigger: CCGGAGGCGTTGTCTGCGACTCGGCGGAGGCTCCAACTTCCAGTGGCCCGGTCGGGAAAGATCAGAGCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372521.9 ENST00000497437.1
CDS CCA 72 bp	TTCTTAGGAGGCTCTGATCTTTCCCGACCGGGCCACTaGAAGTTGGAGCCTCCGCCGAGTCGCAGACAACGC	+
Preference number: 6 (lower is better) Translates to: FLGGSDLSRPGH*KLEPPPSRRQR Trigger: GCGTTGTCTGCGACTCGGCGGAGGCTCCAACTTCCAGTGGCCCGGTCGGGAAAGATCAGAGCCTCCTAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372521.9 ENST00000497437.1
CDS CAA 90 bp	TATTTCTTAGGAGGCTCTGATCTTTCCCGACCGGGCCACTGGAAGTaGGAGCCTCCGCCGAGTCGCAGACAACGCCTCCGGGAGGGTAAT	+
Preference number: 6 (lower is better) Translates to: YFLGGSDLSRPGHWK*EPPPSRRQRLREGN Trigger: ATTACCCTCCCGGAGGCGTTGTCTGCGACTCGGCGGAGGCTCCAACTTCCAGTGGCCCGGTCGGGAAAGATCAGAGCCTCCTAAGAAATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372521.9
CDS GCA 72 bp	GGAGGCTGCATCTGTTTACAGAACTCATCAAACTGCTaGTGCTCCAGTTCTGTCATGACTCTGTTGAGGGCA	+
Preference number: 6 (lower is better) Translates to: GGCICLQNSSNC*CSSSVMTLLRA Trigger: TGCCCTCAACAGAGTCATGACAGAACTGGAGCAGCAGCAGTTTGATGAGTTCTGTAAACAGATGCAGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372521.9 ENST00000372522.5

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