RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SV2C (Homo sapiens)

Ensembl gene IDs: ENSG00000122012

Ensembl transcript IDs: ENST00000322285.7, ENST00000502798.7

Found 608 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTGCTGATGCCAGCTGGGAAGCTGAATGTCAACTGCGGGCCAGGTaGGGTGGGGGTCCTGGCGGGCCAGTCCCACAGCAAAGAGGTACT +
Preference number: 1 (lower is better)
Translates to: FADASWEAECQLRAR*GGGPGGPVPQQRGT
Trigger: AGTACCTCTTTGCTGTGGGACTGGCCCGCCAGGACCCCCACCCCACCTGGCCCGCAGTTGACATTCAGCTTCCCAGCTGGCATCAGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 90 bp GGAAATCCAGCCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTaGGTTCACACTCCCCCTGCACCCATTCCTGTTCTTCACCTTCTC +
Preference number: 1 (lower is better)
Translates to: GNPALHRELCQSQQP*VHTPPAPIPVLHLL
Trigger: GAGAAGGTGAAGAACAGGAATGGGTGCAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGGCTGGATTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 90 bp AGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTaGCTGACCTCTTTCTTCCAAGCCCAGGCAGATTCCAGAGGTAAA +
Preference number: 1 (lower is better)
Translates to: RREGHVADSGPVGMS*LTSFFQAQADSRGK
Trigger: TTTACCTCTGGAATCTGCCTGGGCTTGGAAGAAAGAGGTCAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 90 bp TCAGAGGAGGGTAGAGGGTCACTGACAACTACCCTCTTTCTGCTCTaGCCCCCTGCAGGCCCTAGAACCCCAAACATCCTTTGCAACTTC +
Preference number: 1 (lower is better)
Translates to: SEEGRGSLTTTLFLL*PPAGPRTPNILCNF
Trigger: GAAGTTGCAAAGGATGTTTGGGGTTCTAGGGCCTGCAGGGGGGCAGAGCAGAAAGAGGGTAGTTGTCAGTGACCCTCTACCCTCCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 90 bp GGCCAAGAACGGTCCTTCTGCAGGGGACACGGATGGCAGGTCTCATaGAGTAAGGTTTTGCTGGTTTATCCTATGCTGACCCAACCCAGT +
Preference number: 1 (lower is better)
Translates to: GQERSFCRGHGWQVS*SKVLLVYPMLTQPS
Trigger: ACTGGGTTGGGTCAGCATAGGATAAACCAGCAAAACCTTACTTCATGAGACCTGCCATCCGTGTCCCCTGCAGAAGGACCGTTCTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 90 bp CGCTGGGGAACAGACCCCCTAGCTCCTGTCTCTGGTTTCACACCATaGAAAGAACACCTCAGAAGAAAGCGGGACTTTAGGCCAGGTGTA +
Preference number: 1 (lower is better)
Translates to: RWGTDPLAPVSGFTP*KEHLRRKRDFRPGV
Trigger: TACACCTGGCCTAAAGTCCCGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGGGGGTCTGTTCCCCAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 90 bp TCTGATTCCATACCAGCTGTGCCCATCCTATCAGGGCACAGGCACTaGAAAGCAATTGGAAATCCAGCCCTGCACAGGGAGCTGTGCCAA +
Preference number: 1 (lower is better)
Translates to: SDSIPAVPILSGHRH*KAIGNPALHRELCQ
Trigger: TTGGCACAGCTCCCTGTGCAGGGCTGGATTTCCAATTGCTTTTCAGTGCCTGTGCCCTGATAGGATGGGCACAGCTGGTATGGAATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 90 bp GTCTCAAGGAGGCAGGGAAGAGTGCACAAAAGGTGGGAGAGGTGGTaGCCAAGAAGGTTTGTGACCACAGACTGTCCAGGAGATGAGAAA +
Preference number: 1 (lower is better)
Translates to: VSRRQGRVHKRWERW*PRRFVTTDCPGDEK
Trigger: TTTCTCATCTCCTGGACAGTCTGTGGTCACAAACCTTCTTGGTCACCACCTCTCCCACCTTTTGTGCACTCTTCCCTGCCTCCTTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 90 bp CAGCATTCAGACCTGACTGGAAGGCACCTAGCCTTCAGCACCAAGTaGGGAATCTTCTGCAGACATGGAGAGTACCATCTACCTCCACTA +
Preference number: 1 (lower is better)
Translates to: QHSDLTGRHLAFSTK*GIFCRHGEYHLPPL
Trigger: TAGTGGAGGTAGATGGTACTCTCCATGTCTGCAGAAGATTCCCCACTTGGTGCTGAAGGCTAGGTGCCTTCCAGTCAGGTCTGAATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 90 bp AGAAAGACTGAAGGGAGCCCTGGCAATGGCTCTGTGACTGGTTGGTaGGAGACGGGCGACAAGAGGAATGGTCAACATTTAGAGCAAAAG +
Preference number: 1 (lower is better)
Translates to: RKTEGSPGNGSVTGW*ETGDKRNGQHLEQK
Trigger: CTTTTGCTCTAAATGTTGACCATTCCTCTTGTCGCCCGTCTCTCACCAACCAGTCACAGAGCCATTGCCAGGGCTCCCTTCAGTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 90 bp CATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTTaGTTTTGTACACTGCTAGAATTAAGAGGTTGTCGACCAGAGGAG +
Preference number: 1 (lower is better)
Translates to: HGWAFHPKCPRKAWP*FCTLLELRGCRPEE
Trigger: CTCCTCTGGTCGACAACCTCTTAATTCTAGCAGTGTACAAAAGCAAGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 90 bp TCTTCTAACCTAAGCGCGTTTATCTGGCAAGGCGGGGCCCTTTTCTaGCTGGGTGATGGTAACTGTCAAACCTGCAGTGAACAGAGATAC +
Preference number: 1 (lower is better)
Translates to: SSNLSAFIWQGGALF*LGDGNCQTCSEQRY
Trigger: GTATCTCTGTTCACTGCAGGTTTGACAGTTACCATCACCCAGCCAGAAAAGGGCCCCGCCTTGCCAGATAAACGCGCTTAGGTTAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 90 bp AACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTaGCCTTGCTTTTGTACACTGCTAGAATTAAGAGGTTGTCGACCA +
Preference number: 1 (lower is better)
Translates to: NRHGWAFHPKCPRKA*PCFCTLLELRGCRP
Trigger: TGGTCGACAACCTCTTAATTCTAGCAGTGTACAAAAGCAAGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 90 bp ACAGCCGATATGCCCCTTAACACCAATATCCCAGTTGTCTTTCTGTaGTACCAGGTGAAGGCCAAATTCAGACATTCCTGGCTCCAGAGC +
Preference number: 1 (lower is better)
Translates to: TADMPLNTNIPVVFL*YQVKAKFRHSWLQS
Trigger: GCTCTGGAGCCAGGAATGTCTGAATTTGGCCTTCACCTGGTATCACAGAAAGACAACTGGGATATTGGTGTTAAGGGGCATATCGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 90 bp TTAGCTTCTAAACTTTCAATGAGCAGAACCCCAGGGAAGCCTGGCTaGCTAGGGCATTTTAGAAATGCTTCCACTGATTTGCGGGAGGCA +
Preference number: 1 (lower is better)
Translates to: LASKLSMSRTPGKPG*LGHFRNASTDLREA
Trigger: TGCCTCCCGCAAATCAGTGGAAGCATTTCTAAAATGCCCTAGGCAGCCAGGCTTCCCTGGGGTTCTGCTCATTGAAAGTTTAGAAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 90 bp TGCCCCTTAACACCAATATCCCAGTTGTCTTTCTGTGATACCAGGTaGAGGCCAAATTCAGACATTCCTGGCTCCAGAGCCTTTAGTGCA +
Preference number: 1 (lower is better)
Translates to: CPLTPISQLSFCDTR*RPNSDIPGSRAFSA
Trigger: TGCACTAAAGGCTCTGGAGCCAGGAATGTCTGAATTTGGCCTTCACCTGGTATCACAGAAAGACAACTGGGATATTGGTGTTAAGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 90 bp CAATGGCTCTGTGACTGGTTGGTGAGAGACGGGCGACAAGAGGAATaGTCAACATTTAGAGCAAAAGAACATCACACGGAGAACTGTTAC +
Preference number: 1 (lower is better)
Translates to: QWLCDWLVRDGRQEE*STFRAKEHHTENCY
Trigger: GTAACAGTTCTCCGTGTGATGTTCTTTTGCTCTAAATGTTGACCATTCCTCTTGTCGCCCGTCTCTCACCAACCAGTCACAGAGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 90 bp GCTCAGCTCTTCCCCTGCCCAACCATGCTAGCCTTAAGTAAGAGCTaGAACAGACCCATAAACTGTATTCTTGTAACTCAAAATCCTGGG +
Preference number: 1 (lower is better)
Translates to: AQLFPCPTMLALSKS*NRPINCILVTQNPG
Trigger: CCCAGGATTTTGAGTTACAAGAATACAGTTTATGGGTCTGTTTCAGCTCTTACTTAAGGCTAGCATGGTTGGGCAGGGGAAGAGCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 90 bp AATCTTCTGCAGACATGGAGAGTACCATCTACCTCCACTAGCCAATaGATCTCAAGAACCCAGGTAGGAACATCCTGGTCTTTCAGGAGT +
Preference number: 1 (lower is better)
Translates to: NLLQTWRVPSTSTSQ*ISRTQVGTSWSFRS
Trigger: ACTCCTGAAAGACCAGGATGTTCCTACCTGGGTTCTTGAGATTCATTGGCTAGTGGAGGTAGATGGTACTCTCCATGTCTGCAGAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 90 bp AGTTTGATAGATTTATGCTGTACACGAGCCATCCCACATGGAGCATaGCCTTTCACAAGGATACGCATGGCTGTCTCGGGATATTTGTCA +
Preference number: 1 (lower is better)
Translates to: SLIDLCCTRAIPHGA*PFTRIRMAVSGYLS
Trigger: TGACAAATATCCCGAGACAGCCATGCGTATCCTTGTGAAAGGGCATGCTCCATGTGGGATGGCTCGTGTACAGCATAAATCTATCAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 90 bp AATTCCAAGTTTGATAGATTTATGCTGTACACGAGCCATCCCACATaGAGCATGCCCTTTCACAAGGATACGCATGGCTGTCTCGGGATA +
Preference number: 1 (lower is better)
Translates to: NSKFDRFMLYTSHPT*SMPFHKDTHGCLGI
Trigger: TATCCCGAGACAGCCATGCGTATCCTTGTGAAAGGGCATGCTCCATGTGGGATGGCTCGTGTACAGCATAAATCTATCAAACTTGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 90 bp CCTGTGCGGTTGGTATCTTTCAAATGCATCTTGTCTAGCCTTCAGTaGTTTTTCTTCTTCCTGCCACCTTTGCAGTTTTTGGTTCGGGTT +
Preference number: 1 (lower is better)
Translates to: PVRLVSFKCILSSLQ*FFFFLPPLQFLVRV
Trigger: AACCCGAACCAAAAACTGCAAAGGTGGCAGGAAGAAGAAAAATCACTGAAGGCTAGACAAGATGCATTTGAAAGATACCAACCGCACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 90 bp GGCAAATGTTTAACAACTGTCTTAGGGGTTAGGAGGAGTCTGATTTaGATGGCTTTGTTGCTTTCCATGGCTTTGTTGCTTTCCATGGTA +
Preference number: 1 (lower is better)
Translates to: GKCLTTVLGVRRSLI*MALLLSMALLLSMV
Trigger: TACCATGGAAAGCAACAAAGCCATGGAAAGCAACAAAGCCATGCAAATCAGACTCCTCCTAACCCCTAAGACAGTTGTTAAACATTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 90 bp CCACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTaGGAGCTGTATAGTAAATTTAAGGAGAGCTATAAAATTGTTCAC +
Preference number: 1 (lower is better)
Translates to: PHPLMAPAINWLRCF*ELYSKFKESYKIVH
Trigger: GTGAACAATTTTATAGCTCTCCTTAAATTTACTATACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
3UTR TCA 90 bp CATACAGGAAAGATGAGTTCACAACAGGACCAGCTGTACTTAAGATaGAAACTCCAAAACCTGAAACAGAATTTACACATGCAGCACACG +
Preference number: 1 (lower is better)
Translates to: HTGKMSSQQDQLYLR*KLQNLKQNLHMQHT
Trigger: CGTGTGCTGCATGTGTAAATTCTGTTTCAGGTTTTGGAGTTTTCATCTTAAGTACAGCTGGTCCTGTTGTGAACTCATCTTTCCTGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 90 bp AAAATGATAGGAGGCAGAAGTGAGAGAAAGTTGTTTCTTTCCCTGTaGGGTTGGTATCTTTCAAATGCATCTTGTCTAGCCTTCAGTGAT +
Preference number: 1 (lower is better)
Translates to: KMIGGRSERKLFLSL*GWYLSNASCLAFSD
Trigger: ATCACTGAAGGCTAGACAAGATGCATTTGAAAGATACCAACCGCACAGGGAAAGAAACAACTTTCTCTCACTTCTGCCTCCTATCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 90 bp ATAGGAGGCAGAAGTGAGAGAAAGTTGTTTCTTTCCCTGTGCGGTTaGTATCTTTCAAATGCATCTTGTCTAGCCTTCAGTGATTTTTCT +
Preference number: 1 (lower is better)
Translates to: IGGRSERKLFLSLCG*YLSNASCLAFSDFS
Trigger: AGAAAAATCACTGAAGGCTAGACAAGATGCATTTGAAAGATACCAACCGCACAGGGAAAGAAACAACTTTCTCTCACTTCTGCCTCCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 90 bp ACAAGGATACGCATGGCTGTCTCGGGATATTTGTCAAAACACATTTaGTCAAACATTTTGGCAATTGGAAATCAGACACAGAGGAGCATA +
Preference number: 1 (lower is better)
Translates to: TRIRMAVSGYLSKHI*SNILAIGNQTQRSI
Trigger: TATGCTCCTCTGTGTCTGATTTCCAATTGCCAAAATGTTTGACCAAATGTGTTTTGACAAATATCCCGAGACAGCCATGCGTATCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 90 bp GTTTGTTTTTCCCTACTGAGAAGATTCTGTGATAATAATGGGACTTaGGAGCATTCTGGATTGATTCCAAAGAGCAACAGGGAAATTTTA +
Preference number: 1 (lower is better)
Translates to: VCFSLLRRFCDNNGT*EHSGLIPKSNREIL
Trigger: TAAAATTTCCCTGTTGCTCTTTGGAATCAATCCAGAATGCTCCCAAGTCCCATTATTATCACAGAATCTTCTCAGTAGGGAAAAACAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 90 bp ATTTTGTATTTCCAAATGGCTCTGGGTGTGAATTTCTTCCTAATTTaGAATTTACAATTTAGCTATCCACTGGCAATCTCTAGACTAGAG +
Preference number: 1 (lower is better)
Translates to: ILYFQMALGVNFFLI*NLQFSYPLAISRLE
Trigger: CTCTAGTCTAGAGATTGCCAGTGGATAGCTAAATTGTAAATTGCAAATTAGGAAGAAATTCACACCCAGAGCCATTTGGAAATACAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCCAACTGCGGGCCAGGTaGGGTGGGGGTCCTGGCGGG +
Preference number: 2 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPQLRAR*GGGPGG
Trigger: CCCGCCAGGACCCCCACCCCACCTGGCCCGCAGTTG...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 90 bp CAGGAGTGCAGGCGGGCTGTGATTTTACAGGGAGCCAGGAGCGCATaGAGCAGTGGGCCAGCCCTGGGGAAGCTAGAGGGACAAACCCTC +
Preference number: 2 (lower is better)
Translates to: QECRRAVILQGARSA*SSGPALGKLEGQTL
Trigger: GAGGGTTTGTCCCTCTAGCTTCCCCAGGGCTGGCCCACTGCTCAATGCGCTCCTGGCTCCCTGTAAAATCACAGCCCGCCTGCACTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGTCTGTGACTGGTTGGTaGGAGACGGGCGACAAGAGG +
Preference number: 2 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLSVTGW*ETGDKR
Trigger: CCTCTTGTCGCCCGTCTCTCACCAACCAGTCACAGA...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGCCCCCTCTGCAGACCTaGATTACTTCAAGGGGAAGT +
Preference number: 2 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLPPLQT*ITSRGS
Trigger: ACTTCCCCTTGAAGTAATTCAGGTCTGCAGAGGGGG...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTGGTGGGCCGATCACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPGGPIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGATCGGCCCACC...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCAAGCTGAATGTCAACTaGGGGCCAGGTGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPKLNVN*GPGGVG
Trigger: CCCCACCCCACCTGGCCCGCAGTTGACATTCAGCTT...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTCCACCCTCTTCCCACTaGCCCCAACACCAGTCTTCC +
Preference number: 2 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPPPSSH*PQHQSS
Trigger: GGAAGACTGGTGTTGGGGGCAGTGGGAAGAGGGTGG...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCCTGCACAGGGAGCTGTaGCAAAGCCAGCAGCCTTGC +
Preference number: 2 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPLHREL*QSQQPC
Trigger: GCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAG...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGAGTGGGAGTGGTAAATaGAGGCAGAAGCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLSGSGK*RQKLSL
Trigger: GAGAGAGAGCTTCTGCCTCCATTTACCACTCCCACT...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 90 bp TGGAAATCCAGCCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTaGCGTTCACACTCCCCCTGCACCCATTCCTGTTCTTCACCTTCT +
Preference number: 2 (lower is better)
Translates to: WKSSPAQGAVPKPAA*RSHSPCTHSCSSPS
Trigger: AGAAGGTGAAGAACAGGAATGGGTGCAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGGCTGGATTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTAGGGAGCCCTGGCAATaGCTCTGTGACTGGTTGGTG +
Preference number: 2 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPREPWQ*LCDWLV
Trigger: CACCAACCAGTCACAGAGCCATTGCCAGGGCTCCCT...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGCTTCTAAACTTTCAATaGGCAGAACCCCAGGGAAGC +
Preference number: 2 (lower is better)
Translates to: ERREGHVADSGPVGMSWLLLNFQ*AEPQGS
Trigger: GCTTCCCTGGGGTTCTGCTCATTGAAAGTTTAGAAG...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTTGCCAGCTGGGAAGCTaGATGTCAACTGCGGGCCAG +
Preference number: 2 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSCQLGS*MSTAGQ
Trigger: CTGGCCCGCAGTTGACATTCAGCTTCCCAGCTGGCA...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCGTCAGGATGCTGAGATaGTGGCAGGGCAGACAGCAT +
Preference number: 2 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPVRMLR*WQGRQH
Trigger: ATGCTGTCTGCCCTGCCAGCATCTCAGCATCCTGAC...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCCTAAGCGCGTTTATCTaGCAAGGCGGGGCCCTTTTC +
Preference number: 2 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPLSAFI*QGGALF
Trigger: GAAAAGGGCCCCGCCTTGCCAGATAAACGCGCTTAG...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCCCCAACACTATTCGCTaGGGAACAGACCCCCTAGCT +
Preference number: 2 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPPNTIR*GTDPLA
Trigger: AGCTAGGGGGTCTGTTCCCCAGCGAATAGTGTTGGG...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGATTCCAGAGGTAAAATaGGCAGTCAAACAACCACAG +
Preference number: 2 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLIPEVK*AVKQPQ
Trigger: CTGTGGTTGTTTGACTGCTCATTTTACCTCTGGAAT...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGTCTGGTTTCACACCATaGAAAGAACACCTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLSGFTP*KEHLRR
Trigger: TCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGA...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCAAAGCTTTCCCTTCCTaGAGGCCCCAAGCTATGGCT +
Preference number: 2 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPKAFPS*RPQAMA
Trigger: AGCCATAGCTTGGGGCCTCCAGGAAGGGAAAGCTTT...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGATGGAGATGCACTCCTaGCTTTTGCAGTTATTTCTG +
Preference number: 2 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLMEMHS*LLQLFL
Trigger: CAGAAATAACTGCAAAAGCCAGGAGTGCATCTCCAT...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGCTTGGGTTGTTTGACTaGTGTCTTTGTTCTCCAATA +
Preference number: 2 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLLGLFD*CLCSPI
Trigger: TATTGGAGAACAAAGACAGCAGTCAAACAACCCAAG...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTGGGGACTGTGCTTTCTaGCCTATTCCATGCGGGCTT +
Preference number: 2 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSGDCAF*PIPCGL
Trigger: AAGCCCGCATGGAATAGGCCAGAAAGCACAGTCCCC...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGAGGGGGAAGGGGAGCCTaGGAGGCGAGAAGGTCATGT +
Preference number: 2 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARGGRGA*EARRSC
Trigger: ACATGACCTTCTCGCCTCTCAGGCTCCCCTTCCCCC...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTCTGTTACGCCATACCTaGAACAATGAAGGGACACAC +
Preference number: 2 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPLLRHT*NNEGTH
Trigger: GTGTGTCCCTTCATTGTTTCAGGTATGGCGTAACAG...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTTTGTTTAAGAAAGACTaGAGGGAGCCCTGGCAATGG +
Preference number: 2 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPLFKKD*REPWQW
Trigger: CCATTGCCAGGGCTCCCTTCAGTCTTTCTTAAACAA...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGCAGAAATCTTGCTTATaGAGCACACTCAGATTTTTG +
Preference number: 2 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLQKSCL*STLRFL
Trigger: CAAAAATCTGAGTGTGCTGCATAAGCAAGATTTCTG...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGAGGGCGTGGTGGCGCATaGGTGTGGTCCCAGCTACTT +
Preference number: 2 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARGRGGA*VWSQLL
Trigger: AAGTAGCTGGGACCACACGCATGCGCCACCACGCCC...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTGGGCAAAAATGGCAATaGGGCTCTCAGAGGAGGGTA +
Preference number: 2 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSGQKWQ*GSQRRV
Trigger: TACCCTCCTCTGAGAGCCCCATTGCCATTTTTGCCC...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTGAGCCAGGAGCGCATTaGGCAGTGGGCCAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSEPGAH*AVGQPW
Trigger: CCAGGGCTGGCCCACTGCTCAATGCGCTCCTGGCTC...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGAGAAGGTCATGTAGCTaGCAGCGGGCCCGTGGGAAT +
Preference number: 2 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKARRSCS*QRARGN
Trigger: ATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCT...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCACAGGCCACACCACATaGTTTGGAAATGATTTGAGC +
Preference number: 2 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPTGHTT*FGNDLS
Trigger: GCTCAAATCATTTCCAAAGCATGTGGTGTGGCCTGT...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGAACCCTCTTTCTGCTCTaGCCCCCTGCAGGCCCTAGA +
Preference number: 2 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARTLFLL*PPAGPR
Trigger: TCTAGGGCCTGCAGGGGGGCAGAGCAGAAAGAGGGT...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTGACAGTGTGGGTAAGTaGCAGAATCAGGTAGGCAGA +
Preference number: 2 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSDSVGK*QNQVGR
Trigger: TCTGCCTACCTGATTCTGCCACTTACCCACACTGTC...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCTCAGAACCTGTTTTCTaGATGGCTTATCTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPSEPVF*MAYLLR
Trigger: CCTCAGCAGATAAGCCATCCAGAAAACAGGTTCTGA...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 90 bp GCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTaGCTTTTGTACACTGCTAGAATTAAGAGGTTGTCGACCAGAGGA +
Preference number: 2 (lower is better)
Translates to: AWMGLSSQVPQESLA*LLYTARIKRLSTRG
Trigger: TCCTCTGGTCGACAACCTCTTAATTCTAGCAGTGTACAAAAGCAAGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 90 bp CAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTaGGCCTTGCTTTTGTACACTGCTAGAATTAAGAGGTTGTCGACC +
Preference number: 2 (lower is better)
Translates to: QQAWMGLSSQVPQES*ALLLYTARIKRLST
Trigger: GGTCGACAACCTCTTAATTCTAGCAGTGTACAAAAGCAAGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCGAGATGGTCTGTCTGTaGGAGGGGCCCTCAGGAGTG +
Preference number: 2 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSEMVCL*EGPSGV
Trigger: CACTCCTGAGGGCCCCTCTCACAGACAGACCATCTC...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTAGACTGTCCAGGAGATaGGAAAAGATCCCTCTTAGG +
Preference number: 2 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSRLSRR*EKIPLR
Trigger: CCTAAGAGGGATCTTTTCTCATCTCCTGGACAGTCT...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGAGGAGATGGGCTGCTCTaGTTCCATACCAGCTGTGCC +
Preference number: 2 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARGDGLL*FHTSCA
Trigger: GGCACAGCTGGTATGGAATCAGAGCAGCCCATCTCC...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTCAACTTCAAGACACTTaGAACAACACGCACCAGTTT +
Preference number: 2 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPQLQDT*NNTHQF
Trigger: AAACTGGTGCGTGTTGTTGCAAGTGTCTTGAAGTTG...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTACCCCAAACATCCTTTaGAACTTCAAGACACTTGCA +
Preference number: 2 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPTPNIL*NFKTLA
Trigger: TGCAAGTGTCTTGAAGTTGCAAAGGATGTTTGGGGT...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCAGGAAAGCTTGGCCTTaGTTTTGTACACTGCTAGAA +
Preference number: 2 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPRKAWP*FCTLLE
Trigger: TTCTAGCAGTGTACAAAAGCAAGGCCAAGCTTTCCT...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 90 bp CTAGGTAGGCCTGGTGAATATCAAGGCAAGAAAGGAGTTTCCTTCTaGGATGACTACGTGGGCGCAAGAGGGGAGACACTTTGCAACTTC +
Preference number: 2 (lower is better)
Translates to: LGRPGEYQGKKGVSF*DDYVGARGETLCNF
Trigger: GAAGTTGCAAAGTGTCTCCCCTCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTCACCAGGCCTACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGAGGCAGGAGAATTGCTTaGACCTGGGAGGCGGAAGTT +
Preference number: 2 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARGRRIA*TWEAEV
Trigger: AACTTCCGCCTCCCAGGTTCAAGCAATTCTCCTGCC...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCCAAGAACGGTCCTTCTaGAGGGGACACGGATGGCAG +
Preference number: 2 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSQERSF*RGHGWQ
Trigger: CTGCCATCCGTGTCCCCTGCAGAAGGACCGTTCTTG...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGAGCTCAGCTCTTCCCCTaGCCAACCATGCTAGCCTTA +
Preference number: 2 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARAQLFP*PTMLAL
Trigger: TAAGGCTAGCATGGTTGGGCAGGGGAAGAGCTGAGC...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGGGGAGCATTCTGGATTaGTTCCAAAGAGCAACAGGG +
Preference number: 2 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAGSILD*FQRATG
Trigger: CCCTGTTGCTCTTTGGAATCAATCCAGAATGCTCCC...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTTCTTCTCAGCACAAATaGAATAATGTGCCGACTTAT +
Preference number: 2 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPSSQHK*NNVPTY
Trigger: ATAAGTCGGCACATTATTGCATTTGTGCTGAGAAGA...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTCCCCAAGCTATGGCTTaGCTGAAAATGCCTATAATA +
Preference number: 2 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSPQAMA*LKMPII
Trigger: TATTATAGGCATTTTCAGGCAAGCCATAGCTTGGGG...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCCATAGGCTTAATTATTaGACACAGCAGTGTCTCAAT +
Preference number: 2 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPHRLNY*TQQCLN
Trigger: ATTGAGACACTGCTGTGTGCAATAATTAAGCCTATG...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTCTGTTTGGTGCCACATaGTTTTCTTTGAAAGGCTCT +
Preference number: 2 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSLFGAT*FSLKGS
Trigger: AGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAG...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 90 bp GGGAAGCCTGGCTGCCTAGGGCATTTTAGAAATGCTTCCACTGATTaGCGGGAGGCAGTAGCATCACAGTTTGGAAAGATAACAATGCAT +
Preference number: 2 (lower is better)
Translates to: GKPGCLGHFRNASTD*REAVASQFGKITMH
Trigger: ATGCATTGTTATCTTTCCAAACTGTGATGCTACTGCCTCCCGCAAATCAGTGGAAGCATTTCTAAAATGCCCTAGGCAGCCAGGCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACTGGGAATGTCCTGGCTaGCCTCTTTCTTCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYWECPG*PLSSKP
Trigger: GGGCTTGGAAGAAAGAGGTCAGCCAGGACATTCCCA...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGATGGTTCGGGTTTTCCTaGTGTTCTAGCCCTGATCAC +
Preference number: 2 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARWFGFS*CSSPDH
Trigger: GTGATCAGGGCTAGAACATCAGGAAAACCCGAACCA...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTCAAACAAACAACCTGTaGAAAATCACAAAGGGGCAA +
Preference number: 2 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSQTNNL*KITKGQ
Trigger: TTGCCCCTTTGTGATTTTGCACAGGTTGTTTGTTTG...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGCCAAGGTCTGTACTCTaGTGTGAGATGATTCAGGCA +
Preference number: 2 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAPRSVL*CEMIQA
Trigger: TGCCTGAATCATCTCACACCAGAGTACAGACCTTGG...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 90 bp GCGGGCCAGTCCCACAGCAAAGAGGTACTGGAAAGAGGTACCATTTaGTATTTCCAAATGGCTCTGGGTGTGAATTTCTTCCTAATTTGC +
Preference number: 2 (lower is better)
Translates to: AGQSHSKEVLERGTI*YFQMALGVNFFLIC
Trigger: GCAAATTAGGAAGAAATTCACACCCAGAGCCATTTGGAAATACAAAATGGTACCTCTTTCCAGTACCTCTTTGCTGTGGGACTGGCCCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACAGTGCAGGCGGGCTGTaGTTTTACAGGGAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYSAGGL*FYREPG
Trigger: TCCTGGCTCCCTGTAAAATCACAGCCCGCCTGCACT...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGAGGATGGCAGGTCTCATaGAGTAAGGTTTTGCTGGTT +
Preference number: 2 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARGWQVS*SKVLLV
Trigger: AACCAGCAAAACCTTACTTCATGAGACCTGCCATCC...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTAGGTGGGAGAGGTGGTaGCCAAGAAGGTTTGTGACC +
Preference number: 2 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSRWERW*PRRFVT
Trigger: GGTCACAAACCTTCTTGGTCACCACCTCTCCCACCT...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACGGTGGGAGAATCACTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYGGRIT*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGTGATTCTCCCACC...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGACTGTCAAACCTGCAGTaGACAGAGATACTAGTCAGG +
Preference number: 2 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARLSNLQ*TEILVR
Trigger: CCTGACTAGTATCTCTGTTCACTGCAGGTTTGACAG...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTCCCACTAATGGCTCCTaGTATAAACTGGCTCCGTTG +
Preference number: 2 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPPTNGS*YKLAPL
Trigger: CAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGG...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
3UTR-3UTR GCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGATTCTGGCCTATTCCATaGGGGCTTCCCAAACAACTT +
Preference number: 2 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARFWPIP*GLPKQL
Trigger: AAGTTGTTTGGGAAGCCCGCATGGAATAGGCCAGAA...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCCCACCCAGCCCTGTTTaGTGCCACATGGTTTTCTTT +
Preference number: 2 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSPPSPV*CHMVFF
Trigger: AAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGG...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGTATGGGATTTATTCCTaGCTTCTGGTCATTGGCTGC +
Preference number: 2 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAYGIYS*LLVIGC
Trigger: GCAGCCAATGACCAGAAGCCAGGAATAAATCCCATA...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTGATAATAATGGGACTTaGGAGCATTCTGGATTGATT +
Preference number: 2 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSDNNGT*EHSGLI
Trigger: AATCAATCCAGAATGCTCCCAAGTCCCATTATTATC...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 90 bp TACAAATGCAGAAAGAAACCCTTTGTGAATCACATGAGGTTGAGCTaGCTAAGTCTTTCCCCTTCCTTGGACTTAGGGGCAATGCTGACC +
Preference number: 2 (lower is better)
Translates to: YKCRKKPFVNHMRLS*LSLSPSLDLGAMLT
Trigger: GGTCAGCATTGCCCCTAAGTCCAAGGAAGGGGAAAGACTTAGCAAGCTCAACCTCATGTGATTCACAAAGGGTTTCTTTCTGCATTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGTTCTGTGATACCAGGTaGAGGCCAAATTCAGACATT +
Preference number: 2 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAFCDTR*RPNSDI
Trigger: AATGTCTGAATTTGGCCTTCACCTGGTATCACAGAA...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACACTTTGCACCCCTGCTaGTGGGGTAGATTACCCGCT +
Preference number: 2 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYTLHPC*WGRLPA
Trigger: AGCGGGTAATCTACCCCAGCAGCAGGGGTGCAAAGT...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACCCTGAATCTGCTGTCTaGCAAGACCAAGGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYPESAV*QDQGQL
Trigger: CAGCTGCCCTTGGTCTTGCCAGACAGCAGATTCAGG...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATAGACTAGAGACAGTGTaGGTAAGTGGCAGAATCAGG +
Preference number: 2 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHRLETV*VSGRIR
Trigger: CCTGATTCTGCCACTTACCCACACTGTCTCTAGTCT...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATTTTGCTGATGCCAGCTaGGAAGCTGAATGTCAACTG +
Preference number: 2 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHFADAS*EAECQL
Trigger: CAGTTGACATTCAGCTTCCCAGCTGGCATCAGCAAA...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTCCCGTGGGAATGTCCTaGCTGACCTCTTTCTTCCAA +
Preference number: 2 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSPVGMS*LTSFFQ
Trigger: TTGGAAGAAAGAGGTCAGCCAGGACATTCCCACGGG...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATCTGGCTTCTGGTCATTaGCTGCAAGTCTACAAGGAA +
Preference number: 2 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHLASGH*LQVYKE
Trigger: TTCCTTGTAGACTTGCAGCCAATGACCAGAAGCCAG...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGTTTATTCCTGGCTTCTaGTCATTGGCTGCAAGTCTA +
Preference number: 2 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAFIPGF*SLAASL
Trigger: TAGACTTGCAGCCAATGACCAGAAGCCAGGAATAAA...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTGAAAATGGGTACATGTaGAAGAAGAAAAACATACAG +
Preference number: 2 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSENGYM*KKKNIQ
Trigger: CTGTATGTTTTTCTTCTTCCACATGTACCCATTTTC...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 90 bp GTAATGGGGGTCAGTGTGAGAGTGTCTTCTCTCATTCTGTTTTCCTaGCCCTCATTTAAGTCCTCCATAGGCTTAATTATTGCACACAGC +
Preference number: 2 (lower is better)
Translates to: VMGVSVRVSSLILFS*PSFKSSIGLIIAHS
Trigger: GCTGTGTGCAATAATTAAGCCTATGGAGGACTTAAATGAGGGCAAGGAAAACAGAATGAGAGAAGACACTCTCACACTGACCCCCATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAAAAGACCAAGGGCAGCTaGAGGAGTGGGAGTGGTAAA +
Preference number: 2 (lower is better)
Translates to: CTGSYSESIQMQKETLCEKTKGS*RSGSGK
Trigger: TTTACCACTCCCACTCCTTCAGCTGCCCTTGGTCTT...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTCCAGGGAAGCCTGGCTaGCTAGGGCATTTTAGAAAT +
Preference number: 2 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSPGKPG*LGHFRN
Trigger: ATTTCTAAAATGCCCTAGGCAGCCAGGCTTCCCTGG...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCCTTCTGGTCATTGGCTaGAAGTCTACAAGGAAGGTT +
Preference number: 2 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSLLVIG*KSTRKV
Trigger: AACCTTCCTTGTAGACTTGCAGCCAATGACCAGAAG...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAAAGTTGCGTGTTTAGGTaGCAGTGGCCTGCTACACTG +
Preference number: 2 (lower is better)
Translates to: CTGSYSESIQMQKETLCESCVFR*QWPATL
Trigger: CAGTGTAGCAGGCCACTGGCACCTAAACACGCAACT...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp ACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTATCACACTTGTTGACTTaGTTACTTCACTTTGTGGGA +
Preference number: 2 (lower is better)
Translates to: TPTNGSCYKLAPLFLRAVSHLLT*LLHFVG
Trigger: TCCCACAAAGTGAAGTAACCAAGTCAACAAGTGTGA...TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
3UTR-3UTR CCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGACCTGGGATAGAATGTaGTACATACAGAATTCACAG +
Preference number: 2 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKATWDRM*YIQNSQ
Trigger: CTGTGAATTCTGTATGTACCACATTCTATCCCAGGT...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 90 bp TTTGTGAATCACATGAGGTTGAGCTTGCTAAGTCTTTCCCCTTCCTaGGACTTAGGGGCAATGCTGACCCATAAATCCATGATACTCAAT +
Preference number: 2 (lower is better)
Translates to: FVNHMRLSLLSLSPS*DLGAMLTHKSMILN
Trigger: ATTGAGTATCATGGATTTATGGGTCAGCATTGCCCCTAAGTCCAAGGAAGGGGAAAGACTTAGCAAGCTCAACCTCATGTGATTCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 90 bp AGTCAATACAAATGCAGAAAGAAACCCTTTGTGAATCACATGAGGTaGAGCTTGCTAAGTCTTTCCCCTTCCTTGGACTTAGGGGCAATG +
Preference number: 2 (lower is better)
Translates to: SQYKCRKKPFVNHMR*SLLSLSPSLDLGAM
Trigger: CATTGCCCCTAAGTCCAAGGAAGGGGAAAGACTTAGCAAGCTCAACCTCATGTGATTCACAAAGGGTTTCTTTCTGCATTTGTATTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 90 bp GGAGCATGCCCTTTCACAAGGATACGCATGGCTGTCTCGGGATATTaGTCAAAACACATTTGGTCAAACATTTTGGCAATTGGAAATCAG +
Preference number: 2 (lower is better)
Translates to: GACPFTRIRMAVSGY*SKHIWSNILAIGNQ
Trigger: CTGATTTCCAATTGCCAAAATGTTTGACCAAATGTGTTTTGACAAATATCCCGAGACAGCCATGCGTATCCTTGTGAAAGGGCATGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGCACGTGTTTATGTTCTaGTACTTGATCACCTTTCTA +
Preference number: 2 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAHVFMF*YLITFL
Trigger: TAGAAAGGTGATCAAGTATCAGAACATAAACACGTG...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACATGACAAGAGATCAGTaGAGGCTCGGCTCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYMTRDQ*RLGSAL
Trigger: AAGAGCTGAGCCGAGCCTTCACTGATCTCTTGTCAT...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGAGTGCAATATCCTGCTaGGATTATTTAAGGGAACAA +
Preference number: 2 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKASAISC*DYLREQ
Trigger: TTGTTCCCTTAAATAATCTCAGCAGGATATTGCACT...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGTATTTCTGCACATGCTaGATTCAACTAAAAGACCTG +
Preference number: 2 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAYFCTC*IQLKDL
Trigger: CAGGTCTTTTAGTTGAATGCAGCATGTGCAGAAATA...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACTGGACTTTGCACCCCTaGTGCTGGGGTAGATTACCC +
Preference number: 2 (lower is better)
Translates to: HGINTTTIADLKLQKYCHWTLHP*CWGRLP
Trigger: GGGTAATCTACCCCAGCAGCAGGGGTGCAAAGTCCA...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp ACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTAGGTTACTTCACTTTGTaGGATATTTCTACAAGGCAA +
Preference number: 2 (lower is better)
Translates to: TPTNGSCYKLAPLFLRAVGYFTL*DISTRQ
Trigger: TTGCCTTGTAGAAATATCCCACAAAGTGAAGTAACC...TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
3UTR-3UTR CCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACACAACCACAGGGAGATaGTCTGTCTGTGAGAGGGGC +
Preference number: 2 (lower is better)
Translates to: HGINTTTIADLKLQKYCHTTTGR*SVCERG
Trigger: GCCCCTCTCACAGACAGACCATCTCCCTGTGGTTGT...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACTGTCTTCTACAATGCTaGAGAGTGGAGAGCAGACTA +
Preference number: 2 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYCLLQC*RVESRL
Trigger: TAGTCTGCTCTCCACTCTCCAGCATTGTAGAAGACA...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGATTTAATTGGGCTTTCTaGCAGAAATCTTGCTTATGC +
Preference number: 2 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARFNWAF*QKSCLC
Trigger: GCATAAGCAAGATTTCTGTCAGAAAGCCCAATTAAA...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTTCTTCCTGCCACCTTTaGAGTTTTTGGTTCGGGTTT +
Preference number: 2 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSSSCHL*SFWFGF
Trigger: AAACCCGAACCAAAAACTGCAAAGGTGGCAGGAAGA...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTTTAATCCTCAAAAATaGAAAGAAAGCCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSFNPQK*KESQVQ
Trigger: CTGCACCTGGCTTTCTTTCCATTTTTGAGGATTAAA...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322285.7
3UTR-3UTR CCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACGTGTTTAGGTGCCAGTaGCCTGCTACACTGATACAA +
Preference number: 2 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYVFRCQ*PATLIQ
Trigger: TTGTATCAGTGTAGCAGGCCACTGGCACCTAAACAC...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTTATATAGGAAAACTCTaGAGCCTTGAGTCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSYIGKL*SLESGR
Trigger: CCTTCCTGACTCAAGGCTTCAGAGTTTTCCTATATA...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTTTGTCTAGCCTTCAGTaGTTTTTCTTCTTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSLSSLQ*FFFFLP
Trigger: TGGCAGGAAGAAGAAAAATCACTGAAGGCTAGACAA...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAATGGTTTATCCTATGCTaGCCCAACCCAGTGTTCAAA +
Preference number: 2 (lower is better)
Translates to: CTGSYSESIQMQKETLCEWFILC*PNPVFK
Trigger: TTTGAACACTGGGTTGGGTCAGCATAGGATAAACCA...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACCAGAAAGTATTCCCCTaGACTGCTTTGGAAATGACC +
Preference number: 2 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYQKVFP*TALEMT
Trigger: GGTCATTTCCAAAGCAGTCCAGGGGAATACTTTCTG...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACACCACAAAGCTGTTTTaGACTTTGCACCCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: HGINTTTIADLKLQKYCHTTKLF*TLHPCC
Trigger: GCAGCAGGGGTGCAAAGTCCAAAACAGCTTTGTGGT...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACAGCTGCAGGCTTTGCTaGCTTAGCTCTGAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: HGINTTTIADLKLQKYCHSCRLC*LSSEEK
Trigger: TTTCTCTTCAGAGCTAAGTCAGCAAAGCCTGCAGCT...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAAAACATACAGCCGATATaGCCCTTAACACCAATATCC +
Preference number: 2 (lower is better)
Translates to: CTGSYSESIQMQKETLCENIQPI*PLTPIS
Trigger: GGATATTGGTGTTAAGGGGCATATCGGCTGTATGTT...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp AAGAGACAAAGTCTTTATTCCCATGAAATGGACATCCTAGTGGAGGGACACAGAAAAGTGGTCTGTTTGTaGAGTTGCAAGGTTAACTAT +
Preference number: 2 (lower is better)
Translates to: KRQSLYSHEMDILVEGHRKVVCL*SCKVNY
Trigger: ATAGTTAACCTTGCAACTCCACAAACAGACCACTTT...TCTGTGTCCCTCCACTAGGATGTCCATTTCATGGGAATAAAGACTTTGTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
3UTR-3UTR CCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACGACTTGGGAGCATTCTaGATTGATTCCAAAGAGCAA +
Preference number: 2 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYDLGAF*IDSKEQ
Trigger: TTGCTCTTTGGAATCAATCCAGAATGCTCCCAAGTC...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACAGTAGCATCACAGTTTaGAAAGATAACAATGCATTC +
Preference number: 2 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYSSITV*KDNNAF
Trigger: GAATGCATTGTTATCTTTCCAAACTGTGATGCTACT...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACCCTAGCTCCTGTCTCTaGTTTCACACCATGAAAAGA +
Preference number: 2 (lower is better)
Translates to: HGINTTTIADLKLQKYCHPSSCL*FHTMKR
Trigger: TCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTTTCTTTGAAAGGCTCTaGTATAACAGTGAGAATTAC +
Preference number: 2 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSFFERL*YNSENY
Trigger: GTAATTCTCACTGTTATAGCAGAGCCTTTCAAAGAA...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR GCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTAGTTATTTCTGCACATaGTGCATTCAACTAAAAGAC +
Preference number: 2 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSSYFCT*CIQLKD
Trigger: GTCTTTTAGTTGAATGCAGCATGTGCAGAAATAACT...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACTCTCTCTCGGATCTCTaGTTTTCAAACATTCTGAAC +
Preference number: 2 (lower is better)
Translates to: HGINTTTIADLKLQKYCHSLSDL*FSNILN
Trigger: GTTCAGAATGTTTGAAAATCAGAGATCCGAGAGAGA...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR TCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACAGAGCCTTTAGTGCATaGACAGATCAGGTATATTAC +
Preference number: 2 (lower is better)
Translates to: HGINTTTIADLKLQKYCHRAFSA*TDQVYY
Trigger: GTAATATACCTGATCTGTTCATGCACTAAAGGCTCT...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGGGAGCCAGGAGCGCATaGAGCAGTGGGCCAGCCCTG +
Preference number: 3 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLGARSA*SSGPAL
Trigger: CAGGGCTGGCCCACTGCTCAATGCGCTCCTGGCTCC...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 72 bp GCCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTaGGTTCACACTCCCCCTGCACCCATTCCTGTTCTT +
Preference number: 3 (lower is better)
Translates to: ALHRELCQSQQP*VHTPPAPIPVL
Trigger: AAGAACAGGAATGGGTGCAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGAATGCTTCCACTGATTaGCGGGAGGCAGTAGCATCA +
Preference number: 3 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLNASTD*REAVAS
Trigger: TGATGCTACTGCCTCCCGCAAATCAGTGGAAGCATT...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTAGGTGGGAGAATCACTaGAACCTGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPRWENH*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGTGATTCTCCCACCT...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 72 bp GTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTaGACCCATTCCTGTTCTTCACCTTCTCCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: VPKPAALRSHSP*THSCSSPSPPL
Trigger: CAGAGGAGGAGAAGGTGAAGAACAGGAATGGGTGCAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 72 bp GGCACAGGCACTGAAAAGCAATTGGAAATCCAGCCCTaGACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCG +
Preference number: 3 (lower is better)
Translates to: GTGTEKQLEIQP*TGSCAKASSLA
Trigger: CGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGGCTGGATTTCCAATTGCTTTTCAGTGCCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGAGGACTGAATGTGAGTaGGGTGCCTTAAAACCCAAT +
Preference number: 3 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLRTECE*GALKPN
Trigger: ATTGGGTTTTAAGGCACCCAACTCACATTCAGTCCT...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 72 bp GGTAGAGGGTCACTGACAACTACCCTCTTTCTGCTCTaGCCCCCTGCAGGCCCTAGAACCCCAAACATCCTT +
Preference number: 3 (lower is better)
Translates to: GRGSLTTTLFLL*PPAGPRTPNIL
Trigger: AAGGATGTTTGGGGTTCTAGGGCCTGCAGGGGGGCAGAGCAGAAAGAGGGTAGTTGTCAGTGACCCTCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTGCTTGTAAAAATGAGTaGAGGCCGCCAGTGGCTCAC +
Preference number: 3 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPACKNE*RPPVAH
Trigger: GTGAGCCACTGGCGGCCTCAACTCATTTTTACAAGC...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTTGGCTCTGTGACTGGTaGGTGAGAGACGGGCGACAA +
Preference number: 3 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSWLCDW*VRDGRQ
Trigger: TTGTCGCCCGTCTCTCACCAACCAGTCACAGAGCCA...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 72 bp GCGCGTTTATCTGGCAAGGCGGGGCCCTTTTCTGGCTaGGTGATGGTAACTGTCAAACCTGCAGTGAACAGA +
Preference number: 3 (lower is better)
Translates to: ARLSGKAGPFSG*VMVTVKPAVNR
Trigger: TCTGTTCACTGCAGGTTTGACAGTTACCATCACCCAGCCAGAAAAGGGCCCCGCCTTGCCAGATAAACGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 72 bp GAAGGGAGCCCTGGCAATGGCTCTGTGACTGGTTGGTaGGAGACGGGCGACAAGAGGAATGGTCAACATTTA +
Preference number: 3 (lower is better)
Translates to: EGSPGNGSVTGW*ETGDKRNGQHL
Trigger: TAAATGTTGACCATTCCTCTTGTCGCCCGTCTCTCACCAACCAGTCACAGAGCCATTGCCAGGGCTCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 72 bp CTAAGCGCGTTTATCTGGCAAGGCGGGGCCCTTTTCTaGCTGGGTGATGGTAACTGTCAAACCTGCAGTGAA +
Preference number: 3 (lower is better)
Translates to: LSAFIWQGGALF*LGDGNCQTCSE
Trigger: TTCACTGCAGGTTTGACAGTTACCATCACCCAGCCAGAAAAGGGCCCCGCCTTGCCAGATAAACGCGCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCTTCTTCCTGCCACCTTaGCAGTTTTTGGTTCGGGTT +
Preference number: 3 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPFFLPP*QFLVRV
Trigger: AACCCGAACCAAAAACTGCAAAGGTGGCAGGAAGAA...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 72 bp ACTTTGCACCCCTGCTGCTGGGGTAGATTACCCGCTTaGGTTGAAACCCGTCTGAGTCTGAACAAAGGGTTG +
Preference number: 3 (lower is better)
Translates to: TLHPCCWGRLPA*VETRLSLNKGL
Trigger: CAACCCTTTGTTCAGACTCAGACGGGTTTCAACTCAAGCGGGTAATCTACCCCAGCAGCAGGGGTGCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 72 bp GATTTATGCTGTACACGAGCCATCCCACATGGAGCATaGCCTTTCACAAGGATACGCATGGCTGTCTCGGGA +
Preference number: 3 (lower is better)
Translates to: DLCCTRAIPHGA*PFTRIRMAVSG
Trigger: TCCCGAGACAGCCATGCGTATCCTTGTGAAAGGGCATGCTCCATGTGGGATGGCTCGTGTACAGCATAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTATGCACTCCTGGCTTTaGCAGTTATTTCTGCACATG +
Preference number: 3 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPMHSWL*QLFLHM
Trigger: CATGTGCAGAAATAACTGCAAAAGCCAGGAGTGCAT...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 72 bp CCCATCTATCGCGTCTCCAAGGTCTGTACTCTGGTGTaGGATGATTCAGGCAGCAGGACTGAATGTGAGTTG +
Preference number: 3 (lower is better)
Translates to: PIYRVSKVCTLV*DDSGSRTECEL
Trigger: CAACTCACATTCAGTCCTGCTGCCTGAATCATCTCACACCAGAGTACAGACCTTGGAGACGCGATAGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 72 bp CCCAAAGAGCCCCACCCAGCCCTGTTTGGTGCCACATaGTTTTCTTTGAAAGGCTCTGCTATAACAGTGAGA +
Preference number: 3 (lower is better)
Translates to: PKEPHPALFGAT*FSLKGSAITVR
Trigger: TCTCACTGTTATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGCTCTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTTCTTTCCCTGTGCGGTaGGTATCTTTCAAATGCATC +
Preference number: 3 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSSFPVR*VSFKCI
Trigger: GATGCATTTGAAAGATACCAACCGCACAGGGAAAGA...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTAACCCCAAACATCCTTaGCAACTTCAAGACACTTGC +
Preference number: 3 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSNPKHP*QLQDTC
Trigger: GCAAGTGTCTTGAAGTTGCAAAGGATGTTTGGGGTT...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 72 bp ACAAAAGGTGGGAGAGGTGGTGACCAAGAAGGTTTGTaGCCACAGACTGTCCAGGAGATGAGAAAAGATCCC +
Preference number: 3 (lower is better)
Translates to: TKGGRGGDQEGL*PQTVQEMRKDP
Trigger: GGGATCTTTTCTCATCTCCTGGACAGTCTGTGGTCACAAACCTTCTTGGTCACCACCTCTCCCACCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 72 bp GGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTaGCCTTGCTTTTGTACACTGCTAGAATTAAGAGGT +
Preference number: 3 (lower is better)
Translates to: GWAFHPKCPRKA*PCFCTLLELRG
Trigger: ACCTCTTAATTCTAGCAGTGTACAAAAGCAAGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 72 bp TGGACAATCTCAGCAATTTCAGCATTCAGACCTGACTaGAAGGCACCTAGCCTTCAGCACCAAGTGGGGAAT +
Preference number: 3 (lower is better)
Translates to: WTISAISAFRPD*KAPSLQHQVGN
Trigger: ATTCCCCACTTGGTGCTGAAGGCTAGGTGCCTTCCAGTCAGGTCTGAATGCTGAAATTGCTGAGATTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATGTCACCTTAATTGTCTaGCCCCAAAGAGCCCCACCC +
Preference number: 3 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHVTLIV*PQRAPP
Trigger: GGGTGGGGCTCTTTGGGGCAAGACAATTAAGGTGAC...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCTCAGAGTTTCAGAAGTaGTTGCAATACTGGTGTTTT +
Preference number: 3 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPSEFQK*LQYWCF
Trigger: AAAACACCAGTATTGCAACAACTTCTGAAACTCTGA...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 72 bp CAGACATGGAGAGTACCATCTACCTCCACTAGCCAATaGATCTCAAGAACCCAGGTAGGAACATCCTGGTCT +
Preference number: 3 (lower is better)
Translates to: QTWRVPSTSTSQ*ISRTQVGTSWS
Trigger: AGACCAGGATGTTCCTACCTGGGTTCTTGAGATTCATTGGCTAGTGGAGGTAGATGGTACTCTCCATGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 72 bp GCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTTaGTTTTGTACACTGCTAGAATTAAGAGGTTGTCGA +
Preference number: 3 (lower is better)
Translates to: AFHPKCPRKAWP*FCTLLELRGCR
Trigger: TCGACAACCTCTTAATTCTAGCAGTGTACAAAAGCAAGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 72 bp TGTGACTGGTTGGTGAGAGACGGGCGACAAGAGGAATaGTCAACATTTAGAGCAAAAGAACATCACACGGAG +
Preference number: 3 (lower is better)
Translates to: CDWLVRDGRQEE*STFRAKEHHTE
Trigger: CTCCGTGTGATGTTCTTTTGCTCTAAATGTTGACCATTCCTCTTGTCGCCCGTCTCTCACCAACCAGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 72 bp CTGGTGAATATCAAGGCAAGAAAGGAGTTTCCTTCTTaGATGACTACGTGGGCGCAAGAGGGGAGACACTTT +
Preference number: 3 (lower is better)
Translates to: LVNIKARKEFPS*MTTWAQEGRHF
Trigger: AAAGTGTCTCCCCTCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGATGGGAGCATTCTGGATaGATTCCAAAGAGCAACAGG +
Preference number: 3 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARWEHSG*IPKSNR
Trigger: CCTGTTGCTCTTTGGAATCAATCCAGAATGCTCCCA...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 72 bp TTTGATAGATTTATGCTGTACACGAGCCATCCCACATaGAGCATGCCCTTTCACAAGGATACGCATGGCTGT +
Preference number: 3 (lower is better)
Translates to: FDRFMLYTSHPT*SMPFHKDTHGC
Trigger: ACAGCCATGCGTATCCTTGTGAAAGGGCATGCTCCATGTGGGATGGCTCGTGTACAGCATAAATCTATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp ACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTATTCACACTTGTTGACTaGGTTACTTCACTTTGTGGG +
Preference number: 3 (lower is better)
Translates to: TPTNGSCYKLAPLFLRAVFTLVD*VTSLCG
Trigger: CCCACAAAGTGAAGTAACCAAGTCAACAAGTGTGAA...TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
3UTR TCA 72 bp ATGCCCCTTAACACCAATATCCCAGTTGTCTTTCTGTaGTACCAGGTGAAGGCCAAATTCAGACATTCCTGG +
Preference number: 3 (lower is better)
Translates to: MPLNTNIPVVFL*YQVKAKFRHSW
Trigger: CCAGGAATGTCTGAATTTGGCCTTCACCTGGTATCACAGAAAGACAACTGGGATATTGGTGTTAAGGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 72 bp ATCTTAGAAAAGAGGTCCACACCCACTAATGGCTCCTaGTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTA +
Preference number: 3 (lower is better)
Translates to: ILEKRSTPTNGS*YKLAPLFLRAV
Trigger: TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGTGGACCTCTTTTCTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
3UTR GCA 72 bp GGAGGCAGAAGTGAGAGAAAGTTGTTTCTTTCCCTGTaGGGTTGGTATCTTTCAAATGCATCTTGTCTAGCC +
Preference number: 3 (lower is better)
Translates to: GGRSERKLFLSL*GWYLSNASCLA
Trigger: GGCTAGACAAGATGCATTTGAAAGATACCAACCGCACAGGGAAAGAAACAACTTTCTCTCACTTCTGCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCCTTGGTTACTTCACTTaGTGGGATATTTCTACAAGG +
Preference number: 3 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSLGYFT*WDISTR
Trigger: CCTTGTAGAAATATCCCACAAAGTGAAGTAACCAAG...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
3UTR-3UTR CAA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACCCCACCCAGCCCTGTTaGGTGCCACATGGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: HGINTTTIADLKLQKYCHPTQPC*VPHGFL
Trigger: AAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGG...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTGCCCCAAGCTATGGCTaGCCTGAAAATGCCTATAAT +
Preference number: 3 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSAPSYG*PENAYN
Trigger: ATTATAGGCATTTTCAGGCAAGCCATAGCTTGGGGC...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACATACAGGGTACTTTCTaGGGTTGTTTGACTGCTGTC +
Preference number: 3 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYIQGTF*GCLTAV
Trigger: GACAGCAGTCAAACAACCCAAGAAAGTACCCTGTAT...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAACACATGAGGTTGAGCTaGCTAAGTCTTTCCCCTTCC +
Preference number: 3 (lower is better)
Translates to: CTGSYSESIQMQKETLCEHMRLS*LSLSPS
Trigger: GGAAGGGGAAAGACTTAGCAAGCTCAACCTCATGTG...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 72 bp TTCCCCTGCCCAACCATGCTAGCCTTAAGTAAGAGCTaGAACAGACCCATAAACTGTATTCTTGTAACTCAA +
Preference number: 3 (lower is better)
Translates to: FPCPTMLALSKS*NRPINCILVTQ
Trigger: TTGAGTTACAAGAATACAGTTTATGGGTCTGTTTCAGCTCTTACTTAAGGCTAGCATGGTTGGGCAGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 72 bp GAGCTTTCTCCTCTCATCAAAGGTTATCTCAATGACTaGATAGTTCCTGCACTGCCTGCTGAAGGCTATTAT +
Preference number: 3 (lower is better)
Translates to: ELSPLIKGYLND*IVPALPAEGYY
Trigger: ATAATAGCCTTCAGCAGGCAGTGCAGGAACTATTCAGTCATTGAGATAACCTTTGATGAGAGGAGAAAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 72 bp TTAACAACTGTCTTAGGGGTTAGGAGGAGTCTGATTTaGATGGCTTTGTTGCTTTCCATGGCTTTGTTGCTT +
Preference number: 3 (lower is better)
Translates to: LTTVLGVRRSLI*MALLLSMALLL
Trigger: AAGCAACAAAGCCATGGAAAGCAACAAAGCCATGCAAATCAGACTCCTCCTAACCCCTAAGACAGTTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 72 bp TCCCTACTGAGAAGATTCTGTGATAATAATGGGACTTaGGAGCATTCTGGATTGATTCCAAAGAGCAACAGG +
Preference number: 3 (lower is better)
Translates to: SLLRRFCDNNGT*EHSGLIPKSNR
Trigger: CCTGTTGCTCTTTGGAATCAATCCAGAATGCTCCCAAGTCCCATTATTATCACAGAATCTTCTCAGTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTGAAAACTCTGAAGCCTaGAGTCAGGAAGGAGAATTG +
Preference number: 3 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSENSEA*SQEGEL
Trigger: CAATTCTCCTTCCTGACTCAAGGCTTCAGAGTTTTC...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTACTGTGCTCTGCAGCTaGGGAGATGTTTTATGCATT +
Preference number: 3 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSTVLCS*GDVLCI
Trigger: AATGCATAAAACATCTCCCAAGCTGCAGAGCACAGT...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAACTTATCAGTGGTATCTaGGACTCTCCCTTCTGTCAC +
Preference number: 3 (lower is better)
Translates to: CTGSYSESIQMQKETLCELISGI*DSPFCH
Trigger: GTGACAGAAGGGAGAGTCCAAGATACCACTGATAAG...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAAGCAACTTCAAGACACTaGCAACAACACGCACCAGTT +
Preference number: 3 (lower is better)
Translates to: CTGSYSESIQMQKETLCEATSRH*QQHAPV
Trigger: AACTGGTGCGTGTTGTTGCAAGTGTCTTGAAGTTGC...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR GCA 72 bp GCTAAATCTGGAGCAAGCTATACAGGCCACACCACATaGTTTGGAAATGATTTGAGCTCTCTTAGAAAATCA +
Preference number: 3 (lower is better)
Translates to: AKSGASYTGHTT*FGNDLSSLRKS
Trigger: TGATTTTCTAAGAGAGCTCAAATCATTTCCAAAGCATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp CTGGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTAGGAGAGCTATAAAATaGTTCACACTTGTTGACTTG +
Preference number: 3 (lower is better)
Translates to: LGKCVKWSVCGVARLTIPRRAIK*FTLVDL
Trigger: CAAGTCAACAAGTGTGAACAATTTTATAGCTCTCCT...AGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
3UTR-3UTR CAA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAAGGGTACTTTCTTGGGTaGTTTGACTGCTGTCTTTGT +
Preference number: 3 (lower is better)
Translates to: CTGSYSESIQMQKETLCEGYFLG*FDCCLC
Trigger: ACAAAGACAGCAGTCAAACAACCCAAGAAAGTACCC...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAATTTTCTTTTGATGGGTaGATGGAGATGCACTCCTGG +
Preference number: 3 (lower is better)
Translates to: CTGSYSESIQMQKETLCEFSFDG*MEMHSW
Trigger: CCAGGAGTGCATCTCCATCAACCCATCAAAAGAAAA...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAATCCCAATCCTTTATTTaGTGCACGGGGAAAGTGAGA +
Preference number: 3 (lower is better)
Translates to: CTGSYSESIQMQKETLCESQSFI*CTGKVR
Trigger: TCTCACTTTCCCCGTGCACAAAATAAAGGATTGGGA...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACAGCACACTCAGATTTTaGCTGCTAATTGCAGAGCTT +
Preference number: 3 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYSTLRF*LLIAEL
Trigger: AAGCTCTGCAATTAGCAGCAAAAATCTGAGTGTGCT...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CCA 72 bp ATGCAGCACACGTATATACAGTACAATAGGGGTAACTaGAACATTCATAGCAGGAGATCTTACACAGCATTA +
Preference number: 3 (lower is better)
Translates to: MQHTYIQYNRGN*NIHSRRSYTAL
Trigger: TAATGCTGTGTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGTGTGCTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTAACCTGAACTCTGATTaGGTGAGATTTGTCTATTTG +
Preference number: 3 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSNLNSD*VRFVYL
Trigger: CAAATAGACAAATCTCACCAAATCAGAGTTCAGGTT...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR-3UTR CAA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACCTCATTCTGTTTTCCTaGCCCTCATTTAAGTCCTCC +
Preference number: 3 (lower is better)
Translates to: HGINTTTIADLKLQKYCHLILFS*PSFKSS
Trigger: GGAGGACTTAAATGAGGGCAAGGAAAACAGAATGAG...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 72 bp TGTTGCTTTCCATGGTATAAATACCACCACTATAGCTaGTCTCAAACTACAAAAATACTGTCACTTGGGAAG +
Preference number: 3 (lower is better)
Translates to: CCFPWYKYHHYS*SQTTKILSLGK
Trigger: CTTCCCAAGTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATGGAAAGCAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR TCA 72 bp AAGATGAGTTCACAACAGGACCAGCTGTACTTAAGATaGAAACTCCAAAACCTGAAACAGAATTTACACATG +
Preference number: 3 (lower is better)
Translates to: KMSSQQDQLYLR*KLQNLKQNLHM
Trigger: CATGTGTAAATTCTGTTTCAGGTTTTGGAGTTTTCATCTTAAGTACAGCTGGTCCTGTTGTGAACTCATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGCTCGCTTCCCCGGGCTaGCTCCGTCTGCCACTCTCG +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLLASPG*LRLPLS
Trigger: CGAGAGTGGCAGACGGAGGCAGCCCGGGGAAGCGAG...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGTGCCAGCTGGGAAGCTaGATGTCAACTGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLCQLGS*MSTAGQ
Trigger: CTGGCCCGCAGTTGACATTCAGCTTCCCAGCTGGCA...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCGAGCCAGGAGCGCATTaGGCAGTGGGCCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPEPGAH*AVGQPW
Trigger: CCAGGGCTGGCCCACTGCTCAATGCGCTCCTGGCTC...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGAGAAGGTCATGTAGCTaGCAGCGGGCCCGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLRRSCS*QRARGN
Trigger: ATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCT...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGTGTACTCATCGCCCTTaGGCTGCCCCACTGACACGA +
Preference number: 4 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLCTHRP*AAPLTR
Trigger: TCGTGTCAGTGGGGCAGCCCAAGGGCGATGAGTACA...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGAGGGAGCCCTGGCAATaGCTCTGTGACTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLREPWQ*LCDWLV
Trigger: CACCAACCAGTCACAGAGCCATTGCCAGGGCTCCCT...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTCGGGCTGCCTCCGTCTaGCACTCTCGCCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSRAASV*HSRLQR
Trigger: GCGCTGCAGGCGAGAGTGGCAGACGGAGGCAGCCCG...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGGCCTTTCATCCCAAGTaGCCCAGGAAAGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLAFHPK*PRKAWP
Trigger: AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGC...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGCCTTCTCCTCCTCTGTaGCTCCACAACAGGCATGGA +
Preference number: 4 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLPSPPL*LHNRHG
Trigger: TCCATGCCTGTTGTGGAGGCACAGAGGAGGAGAAGG...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCGGGCGTGGTGGCGCATaGGTGTGGTCCCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPGRGGA*VWSQLL
Trigger: AAGTAGCTGGGACCACACGCATGCGCCACCACGCCC...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGCAATGGCTCTGTGACTaGTTGGTGAGAGACGGGCGA +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLQWLCD*LVRDGR
Trigger: TCGCCCGTCTCTCACCAACCAGTCACAGAGCCATTG...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTGAGATGGTCTGTCTGTaGGAGGGGCCCTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPEMVCL*EGPSGV
Trigger: CACTCCTGAGGGCCCCTCTCACAGACAGACCATCTC...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGCCCCCTCTGCAGACCTaGATTACTTCAAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLPPLQT*ITSRGS
Trigger: ACTTCCCCTTGAAGTAATTCAGGTCTGCAGAGGGGG...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGAGTTTCCTTCTTGGATaGCTACGTGGGCGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLSFLLG*LRGRKR
Trigger: CCTCTTGCGCCCACGTAGTCATCCAAGAAGGAAACT...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGACAGCCTCCTTTCAGTaGTTCAGCTCTGACAGCATC +
Preference number: 4 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLTASFQ*FSSDSI
Trigger: GATGCTGTCAGAGCTGAACCACTGAAAGGAGGCTGT...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGGGTCTGTCTCAGCACTaGGTAACACGAAGCCAACGA +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLGLSQH*VTRSQR
Trigger: TCGTTGGCTTCGTGTTACCCAGTGCTGAGACAGACC...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGTTTCTTTTGATGGGTTaGTGGAGATGCACTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLFLLMG*WRCTPG
Trigger: GCCAGGAGTGCATCTCCATCAACCCATCAAAAGAAA...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGGGATGGCAGGTCTCATaGAGTAAGGTTTTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLGWQVS*SKVLLV
Trigger: AACCAGCAAAACCTTACTTCATGAGACCTGCCATCC...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATGGTGGGCCGATCACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYGGPIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTGATCGGCCCACC...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGCCAGTTGTCTTTCTGTaGTACCAGGTGAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLPVVFL*YQVKAK
Trigger: TTTGGCCTTCACCTGGTATCACAGAAAGACAACTGG...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATACCCTCTTTCTGCTCTaGCCCCCTGCAGGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYTLFLL*PPAGPR
Trigger: TCTAGGGCCTGCAGGGGGGCAGAGCAGAAAGAGGGT...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTCTGCACAGGGAGCTGTaGCAAAGCCAGCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSLHREL*QSQQPC
Trigger: GCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAG...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGTGGCCAATGAGAAGATaGGAAATTTTCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLWPMRR*EIFTAS
Trigger: GGAGGCTGTGAAAATTTCCCATCTTCTCATTGGCCA...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGCCCGGGCTCTCATGTTaGTGTCATGAATTAACTTCA +
Preference number: 4 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLPGLSC*CHELTS
Trigger: TGAAGTTAATTCATGACACCAACATGAGAGCCCGGG...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGAGACACAATGTTCCCTaGCAATACTGCCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLRHNVP*QYCQCP
Trigger: GGGACATTGGCAGTATTGCCAGGGAACATTGTGTCT...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTCAGCAGGATGGGGATTaGTTTGGTGATGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPQQDGD*FGDADQ
Trigger: CTGGTCAGCATCACCAAATCAATCCCCATCCTGCTG...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTTCTGTGACTGGTTGGTaGGAGACGGGCGACAAGAGG +
Preference number: 4 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSSVTGW*ETGDKR
Trigger: CCTCTTGTCGCCCGTCTCTCACCAACCAGTCACAGA...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCTGGCAGAGGCGTAGATaGCACCGATCATCCAGAACA +
Preference number: 4 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPWQRRR*HRSSRT
Trigger: TGTTCTGGATGATCGGTGGCATCTACGCCTCTGCCA...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGCAAAGGGTTGAAAACTaGTTTCTGCTCCTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLQRVEN*FLLLVL
Trigger: CAGGACTAGGAGCAGAAAGCAGTTTTCAACCCTTTG...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCATGCTGTCCTTCGCTTaGTTCATACTGGGGATGCCC +
Preference number: 4 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPMLSFA*FILGMP
Trigger: GGGCATCCCCAGTATGAACCAAGCGAAGGACAGCAT...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGCTCCAACAAGAATCGTaGGCTTTCAGGCATGAATGT +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLLQQES*AFRHEC
Trigger: ACATTCATGCCTGAAAGCCCACGATTCTTGTTGGAG...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGAGTTCCAGGCTGAGATaGTCAATCCATTGTACAGAC +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLSSRLR*SIHCTD
Trigger: GTCTGTACAATGGATTGACCATCTCAGCCTGGAACT...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACCAACTGCGGGCCAGGTaGGGTGGGGGTCCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYQLRAR*GGGPGG
Trigger: CCCGCCAGGACCCCCACCCCACCTGGCCCGCAGTTG...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATGGCGGGGCCCTTTTCTaGCTGGGTGATGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYGGALF*LGDGNC
Trigger: ACAGTTACCATCACCCAGCCAGAAAAGGGCCCCGCC...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGGGGGGAAGGGGAGCCTaGGAGGCGAGAAGGTCATGT +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAGGRGA*EARRSC
Trigger: ACATGACCTTCTCGCCTCTCAGGCTCCCCTTCCCCC...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCGGGAGCATTCTGGATTaGTTCCAAAGAGCAACAGGG +
Preference number: 4 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPGSILD*FQRATG
Trigger: CCCTGTTGCTCTTTGGAATCAATCCAGAATGCTCCC...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTATGACAAGAGATCAGTaGAGGCTCGGCTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPMTRDQ*RLGSAL
Trigger: AAGAGCTGAGCCGAGCCTTCACTGATCTCTTGTCAT...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCGAGTGGTGTCAGCACTaGAGCCGCCTCAGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSEWCQH*SRLSAG
Trigger: GCCCGCACTGAGGCGGCTGCAGTGCTGACACCACTC...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp ACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTAGCCGTCGGACACCCTTaGCCTGAGTGGTGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: TPTNGSCYKLAPLFLRAVAVGHP*PEWCQH
Trigger: GTGCTGACACCACTCAGGGCAAGGGTGTCCGACGGC...TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATGTCAGGATGCTGAGATaGTGGCAGGGCAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYVRMLR*WQGRQH
Trigger: ATGCTGTCTGCCCTGCCAGCATCTCAGCATCCTGAC...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTAGTATTCCCCTGGACTaGTTTGGAAATGACCCCAGC +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPSIPLD*FGNDPS
Trigger: GCTGGGGTCATTTCCAAAGCAGTCCAGGGGAATACT...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGAGGAAAGCTTGGCCTTaGTTTTGTACACTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLRKAWP*FCTLLE
Trigger: TTCTAGCAGTGTACAAAAGCAAGGCCAAGCTTTCCT...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATTGGACTTTGCACCCCTaGTGCTGGGGTAGATTACCC +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYWTLHP*CWGRLP
Trigger: GGGTAATCTACCCCAGCAGCAGGGGTGCAAAGTCCA...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCGCCTTCAGCACCAAGTaGGGAATCTTCTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPAFSTK*GIFCRH
Trigger: ATGTCTGCAGAAGATTCCCCACTTGGTGCTGAAGGC...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCAGGCCGATCCCATGCTaGAGCTCCACCCGTAGTGCG +
Preference number: 4 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSRPIPC*SSTRSA
Trigger: CGCACTACGGGTGGAGCTTCAGCATGGGATCGGCCT...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTGCTTTTCACTTAGTCTaGGCTCTGCGAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPAFHLV*ALRGII
Trigger: AATGATCCCTCGCAGAGCTCAGACTAAGTGAAAAGC...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATAGGGTAGAGGGTCACTaGCAACTACCCTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYRVEGH*QLPSFC
Trigger: GCAGAAAGAGGGTAGTTGTCAGTGACCCTCTACCCT...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGGAAAACTCCAAAACCTaGAACAGAATTTACACATGC +
Preference number: 4 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLENSKT*NRIYTC
Trigger: GCATGTGTAAATTCTGTTTCAGGTTTTGGAGTTTTC...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTAGCATACAGGAAAGATaGGTTCACAACAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPSIQER*VHNRTS
Trigger: GCTGGTCCTGTTGTGAACTCATCTTTCCTGTATGCT...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGTTTGCAGCTGTTACATaGATGTTAGTTATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLFAAVT*MLVIWH
Trigger: ATGCCAGATAACTAACATTCATGTAACAGCTGCAAA...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGAGCCGTCGGACACCCTTaGCCTGAGTGGTGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARAVGHP*PEWCQH
Trigger: GTGCTGACACCACTCAGGGCAAGGGTGTCCGACGGC...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGCCACCCTCTTCCCACTaGCCCCAACACCAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAPPSSH*PQHQSS
Trigger: GGAAGACTGGTGTTGGGGGCAGTGGGAAGAGGGTGG...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGATTAGCTGGGCGTGGTaGCGCATGCGTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAISWAW*RMRVVP
Trigger: TGGGACCACACGCATGCGCCACCACGCCCAGCTAAT...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTACTGGTGGGCAAAAATaGCAATGGGGCTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSTGGQK*QWGSQR
Trigger: CCTCTGAGAGCCCCATTGCCATTTTTGCCCACCAGT...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATGCATTCAGACCTGACTaGAAGGCACCTAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYAFRPD*KAPSLQ
Trigger: CTGAAGGCTAGGTGCCTTCCAGTCAGGTCTGAATGC...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGAAAAATACTGTCACTTaGGAAGGTGTGTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLKNTVT*EGVCSS
Trigger: ACTACTACACACACCTTCCCAAGTGACAGTATTTTT...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGCACGTGTTTATGTTCTaGTACTTGATCACCTTTCTA +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLHVFMF*YLITFL
Trigger: TAGAAAGGTGATCAAGTATCAGAACATAAACACGTG...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACGAGTGGTGTCAGCACTaGAGCCGCCTCAGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYEWCQH*SRLSAG
Trigger: GCCCGCACTGAGGCGGCTGCAGTGCTGACACCACTC...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTCATCGCCCTTGGGCTaGCCCACTGACACGATGCTG +
Preference number: 4 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSSSPLG*PTDTML
Trigger: CAGCATCGTGTCAGTGGGGCAGCCCAAGGGCGATGA...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTTCTTCCTGCCACCTTTaGAGTTTTTGGTTCGGGTTT +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPSSCHL*SFWFGF
Trigger: AAACCCGAACCAAAAACTGCAAAGGTGGCAGGAAGA...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTATTCCATACCAGCTGTaGCCATCCTATCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSIPYQL*PSYQGT
Trigger: TGTGCCCTGATAGGATGGGCACAGCTGGTATGGAAT...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTAGTACGAGAACACAGTaGGTATGGCTCCTCCAATCC +
Preference number: 4 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSSTRTQ*VWLLQS
Trigger: GGATTGGAGGAGCCATACCCACTGTGTTCTCGTACT...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGTGTATTATCCCTGACTaGGTAGTTGAAACATCTCAT +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLCIIPD*VVETSH
Trigger: ATGAGATGTTTCAACTACCCAGTCAGGGATAATACA...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATCTTCTGCTCTGGAGATaGGCTGCTCTGATTCCATAC +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYLLLWR*AALIPY
Trigger: GTATGGAATCAGAGCAGCCCATCTCCAGAGCAGAAG...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTCTCAGACTTCTGCTCTaGAGATGGGCTGCTCTGATT +
Preference number: 4 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSLRLLL*RWAALI
Trigger: AATCAGAGCAGCCCATCTCCAGAGCAGAAGTCTGAG...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTTCACAAGGATACGCATaGCTGTCTCGGGATATTTGT +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPSQGYA*LSRDIC
Trigger: ACAAATATCCCGAGACAGCCATGCGTATCCTTGTGA...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATGCTCGGTCCACAGCTTaGTTCACCTTCTTTACTGTT +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYARSTA*FTFFTV
Trigger: AACAGTAAAGAAGGTGAATCAAGCTGTGGACCGAGC...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp ACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTACTCAGTGGCTTCACTTaGGCCTTCGTCATCGTTGGC +
Preference number: 4 (lower is better)
Translates to: TPTNGSCYKLAPLFLRAVLSGFT*AFVIVG
Trigger: GCCAACGATGACGAAGGCTCAAGTGAAGCCACTGAG...TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp AAGAGACAAAGTCTTTATTCCCATGAAATGGACATCCTAGTGGAGGGACACAGACTTGGGCTGCCCCACTaGCACGATGCTGTCCTTCGC +
Preference number: 4 (lower is better)
Translates to: KRQSLYSHEMDILVEGHRLGLPH*HDAVLR
Trigger: GCGAAGGACAGCATCGTGTCAGTGGGGCAGCCCAAG...TCTGTGTCCCTCCACTAGGATGTCCATTTCATGGGAATAAAGACTTTGTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACCTTGGGCTGCCCCACTaGCACGATGCTGTCCTTCGC +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYLGLPH*HDAVLR
Trigger: GCGAAGGACAGCATCGTGTCAGTGGGGCAGCCCAAG...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCAAGACCTTCTCAGGCTaGCCCCGGGCTCTCATGTTG +
Preference number: 4 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSKTFSG*PRALML
Trigger: CAACATGAGAGCCCGGGGTCAGCCTGAGAAGGTCTT...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCTATATAGGAAAACTCTaGAGCCTTGAGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPYIGKL*SLESGR
Trigger: CCTTCCTGACTCAAGGCTTCAGAGTTTTCCTATATA...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTATTCCAGAGGTAAAATaGGCAGTCAAACAACCACAG +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPIPEVK*AVKQPQ
Trigger: CTGTGGTTGTTTGACTGCTCATTTTACCTCTGGAAT...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTTTGTCTAGCCTTCAGTaGTTTTTCTTCTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPLSSLQ*FFFFLP
Trigger: TGGCAGGAAGAAGAAAAATCACTGAAGGCTAGACAA...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGAGGTGGGAGAGGTGGTaGCCAAGAAGGTTTGTGACC +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKARWERW*PRRFVT
Trigger: GGTCACAAACCTTCTTGGTCACCACCTCTCCCACCT...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATCTGTCAAACCTGCAGTaGACAGAGATACTAGTCAGG +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYLSNLQ*TEILVR
Trigger: CCTGACTAGTATCTCTGTTCACTGCAGGTTTGACAG...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCTCTGGTTTCACACCATaGAAAGAACACCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPSGFTP*KEHLRR
Trigger: TCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGA...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGGCCCCACTGACACGATaGTGTCCTTCGCTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAAPLTR*CPSLGS
Trigger: TGAACCAAGCGAAGGACAGCATCGTGTCAGTGGGGC...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp ACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTACACCTCTACACCGTCTaGCATAAGAGCCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: TPTNGSCYKLAPLFLRAVHLYTV*HKSHAQ
Trigger: CTGGGCATGGCTCTTATGGCAGACGGTGTAGAGGTG...TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATATCCTGAATTTGGGATaGAGAGGTCTGTCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYILNLG*RGLSQH
Trigger: GTGCTGAGACAGACCTCTGCATCCCAAATTCAGGAT...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTTGTACAGACACAGCATaGCTATCATCATGGATTCAC +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPCTDTA*LSSWIH
Trigger: GTGAATCCATGATGATAGGCATGCTGTGTCTGTACA...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGGCTCAGCTCTTCCCCTaGCCAACCATGCTAGCCTTA +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAAQLFP*PTMLAL
Trigger: TAAGGCTAGCATGGTTGGGCAGGGGAAGAGCTGAGC...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGACTTTGCACCCCTGCTaGTGGGGTAGATTACCCGCT +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKATLHPC*WGRLPA
Trigger: AGCGGGTAATCTACCCCAGCAGCAGGGGTGCAAAGT...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTATCAGCTCATACTGCTaGGCTAACTCTTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSISSYC*ANSSSS
Trigger: TGACGAGGAAGAGTTAGCCCAGCAGTATGAGCTGAT...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATTTTGCTGATGCCAGCTaGGAAGCTGAATGTCAACTG +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYFADAS*EAECQL
Trigger: CAGTTGACATTCAGCTTCCCAGCTGGCATCAGCAAA...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGTCTATCTATTTTGATTaGCAGAGGGAATCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: ERREGHVADSGPVGMSWLSIYFD*QRESES
Trigger: ACTTTCTGATTCCCTCTGCCAATCAAAATAGATAGA...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGCCCAACACTATTCGCTaGGGAACAGACCCCCTAGCT +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAPNTIR*GTDPLA
Trigger: AGCTAGGGGGTCTGTTCCCCAGCGAATAGTGTTGGG...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATAAGGAGTTTCCTTCTTaGATGACTACGTGGGCGCAA +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYKEFPS*MTTWAQ
Trigger: TTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTT...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTTCAACTGATGGCCAATaGGAAGATGGGAAATTTTCA +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPSTDGQ*EDGKFS
Trigger: TGAAAATTTCCCATCTTCTCATTGGCCATCAGTTGA...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATCCATCTTATCTCAACTaGTGGCCAATGAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYPSYLN*WPMRRW
Trigger: CCATCTTCTCATTGGCCATCAGTTGAGATAAGATGG...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTAGGCCGATCCCATGCTaGAGCTCCACCCGTAGTGCG +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSRPIPC*SSTRSA
Trigger: CGCACTACGGGTGGAGCTTCAGCATGGGATCGGCCT...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATAAGACCTTCTCAGGCTaGCCCCGGGCTCTCATGTTG +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHKTFSG*PRALML
Trigger: CAACATGAGAGCCCGGGGTCAGCCTGAGAAGGTCTT...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCATGTCCCCAGAAAGTTaGCAAAATAAATCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPMSPES*QNKSSR
Trigger: CCTACTGGATTTATTTTGTCAACTTTCTGGGGACAT...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCTACTGGGTCCTATTCTaGGTCAATACAAATGCAGAA +
Preference number: 4 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPYWVLF*VNTNAE
Trigger: TTCTGCATTTGTATTGACTCAGAATAGGACCCAGTA...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTACTGTACATTCTTTCTaGAGGAATGACACCCATAGA +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPTVHSF*RNDTHR
Trigger: TCTATGGGTGTCATTCCTTCAGAAAGAATGTACAGT...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp ACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTATGGCAGAGGCGTAGATaGCACCGATCATCCAGAACA +
Preference number: 4 (lower is better)
Translates to: TPTNGSCYKLAPLFLRAVWQRRR*HRSSRT
Trigger: TGTTCTGGATGATCGGTGGCATCTACGCCTCTGCCA...TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATCAGAGTTCCCACCACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHQSSHH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGTGGGAACTCTG...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCCAAAGCCAGCAGCCTTaGGTTCACACTCCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSQSQQP*VHTPPA
Trigger: TGCAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTG...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTAGCCTTCGTCATCGTTaGCCTCACCATTATAGGTTT +
Preference number: 4 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSSLRHR*PHHYRF
Trigger: AAACCTATAATGGTGAGGCCAACGATGACGAAGGCT...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp ACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTAATGCTGTCCTTCGCTTaGTTCATACTGGGGATGCCC +
Preference number: 4 (lower is better)
Translates to: TPTNGSCYKLAPLFLRAVMLSFA*FILGMP
Trigger: GGGCATCCCCAGTATGAACCAAGCGAAGGACAGCAT...TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTTGTACTCATCGCCCTTaGGCTGCCCCACTGACACGA +
Preference number: 4 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPCTHRP*AAPLTR
Trigger: TCGTGTCAGTGGGGCAGCCCAAGGGCGATGAGTACA...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTCTGGAACCTTATCAGTaGTATCTTGGACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSLEPYQ*YLGLSL
Trigger: AAGGGAGAGTCCAAGATACCACTGATAAGGTTCCAG...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGGGGCAAAAATGGCAATaGGGCTCTCAGAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAGQKWQ*GSQRRV
Trigger: TACCCTCCTCTGAGAGCCCCATTGCCATTTTTGCCC...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTAAAGTAGGCAGAGAGTaGACAATCTCAGCAATTTCA +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPKVGRE*TISAIS
Trigger: TGAAATTGCTGAGATTGTCCACTCTCTGCCTACTTT...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 72 bp GGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTaGCTTTTGTACACTGCTAGAATTAAGAGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: GLSSQVPQESLA*LLYTARIKRLS
Trigger: CGACAACCTCTTAATTCTAGCAGTGTACAAAAGCAAGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 72 bp TGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTaGGCCTTGCTTTTGTACACTGCTAGAATTAAGAGG +
Preference number: 4 (lower is better)
Translates to: WMGLSSQVPQES*ALLLYTARIKR
Trigger: CCTCTTAATTCTAGCAGTGTACAAAAGCAAGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 72 bp CCTGGTGAATATCAAGGCAAGAAAGGAGTTTCCTTCTaGGATGACTACGTGGGCGCAAGAGGGGAGACACTT +
Preference number: 4 (lower is better)
Translates to: PGEYQGKKGVSF*DDYVGARGETL
Trigger: AAGTGTCTCCCCTCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTCACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTTTCTGTGATACCAGGTaGAGGCCAAATTCAGACATT +
Preference number: 4 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSFCDTR*RPNSDI
Trigger: AATGTCTGAATTTGGCCTTCACCTGGTATCACAGAA...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTGCCTTAAGTAAGAGCTaGAACAGACCCATAAACTGT +
Preference number: 4 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSALSKS*NRPINC
Trigger: ACAGTTTATGGGTCTGTTTCAGCTCTTACTTAAGGC...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp ACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTACCCACTAATGGCTCCTaGTATAAACTGGCTCCGTTG +
Preference number: 4 (lower is better)
Translates to: TPTNGSCYKLAPLFLRAVPTNGS*YKLAPL
Trigger: CAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGG...TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCCAGAAATCTTGCTTATaGAGCACACTCAGATTTTTG +
Preference number: 4 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPQKSCL*STLRFL
Trigger: CAAAAATCTGAGTGTGCTGCATAAGCAAGATTTCTG...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATAACATACAGCCGATATaGCCCTTAACACCAATATCC +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYNIQPI*PLTPIS
Trigger: GGATATTGGTGTTAAGGGGCATATCGGCTGTATGTT...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCGAGCTCTCAGACTTCTaGTCTGGAGATGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSELSDF*SGDGLL
Trigger: GAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTC...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCATGAGGATACATAACTaGATGGATGCTAAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPMRIHN*MDAKKV
Trigger: CACTTTCTTAGCATCCATGCAGTTATGTATCCTCAT...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTAACCGACAGGACCATTaGCAAGATCTCATTAAAATA +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPNRQDH*QDLIKI
Trigger: TATTTTAATGAGATCTTGGCAATGGTCCTGTCGGTT...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATCTGTTTGGTGCCACATaGTTTTCTTTGAAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYLFGAT*FSLKGS
Trigger: AGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAG...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTGACTTGGGAGCATTCTaGATTGATTCCAAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSDLGAF*IDSKEQ
Trigger: TTGCTCTTTGGAATCAATCCAGAATGCTCCCAAGTC...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCGATAATAATGGGACTTaGGAGCATTCTGGATTGATT +
Preference number: 4 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPDNNGT*EHSGLI
Trigger: AATCAATCCAGAATGCTCCCAAGTCCCATTATTATC...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGCTTCTAAACTTTCAATaGGCAGAACCCCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKALLNFQ*AEPQGS
Trigger: GCTTCCCTGGGGTTCTGCTCATTGAAAGTTTAGAAG...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCAAGACCAAGGGCAGCTaGAGGAGTGGGAGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSKTKGS*RSGSGK
Trigger: TTTACCACTCCCACTCCTTCAGCTGCCCTTGGTCTT...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTCTGGCAATGGCTCTGTaGCTGGTTGGTGAGAGACGG +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSLAMAL*LVGERR
Trigger: CCGTCTCTCACCAACCAGTCACAGAGCCATTGCCAG...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGTTGTTTAAGAAAGACTaGAGGGAGCCCTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKALFKKD*REPWQW
Trigger: CCATTGCCAGGGCTCCCTTCAGTCTTTCTTAAACAA...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATTCAGGAGTCAAACGCTaGGCTCTCAGACTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHSGVKR*ALRLLL
Trigger: GAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGA...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CTGGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTGGTTCATACTGGGGATaGCCTGATACTCCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LGKCVKWSVCGVARLTIPGSYWG*PDTPPH
Trigger: ATGAGGGGGAGTATCAGGGCATCCCCAGTATGAACC...AGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACTCATCGCCCTTGGGCTaGCCCACTGACACGATGCTG +
Preference number: 4 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYSSPLG*PTDTML
Trigger: CAGCATCGTGTCAGTGGGGCAGCCCAAGGGCGATGA...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTCAATCCTTTATTTTGTaGACGGGGAAAGTGAGAACT +
Preference number: 4 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSQSFIL*TGKVRT
Trigger: AGTTCTCACTTTCCCCGTGCACAAAATAAAGGATTG...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATGTATCACATGGGAGGTaGTCAATAAGTATTTACTGG +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYVSHGR*SISIYW
Trigger: CCAGTAAATACTTATTGAGCACCTCCCATGTGATAC...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTTTTCCATGGCTTTGTTaGTTTCCATGGTATAAATAC +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPFPWLC*FPWYKY
Trigger: GTATTTATACCATGGAAAGCAACAAAGCCATGGAAA...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATTGTGGCCTGTGTCTATaGAGTGGGAGGCCAAGCATT +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHCGLCL*SGRPSI
Trigger: AATGCTTGGCCTCCCACTGCATAGACACAGGCCACA...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCACAGCCTCCTTTCAGTaGTTCAGCTCTGACAGCATC +
Preference number: 4 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSTASFQ*FSSDSI
Trigger: GATGCTGTCAGAGCTGAACCACTGAAAGGAGGCTGT...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTGGTCTGTCTCAGCACTaGGTAACACGAAGCCAACGA +
Preference number: 4 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPGLSQH*VTRSQR
Trigger: TCGTTGGCTTCGTGTTACCCAGTGCTGAGACAGACC...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCAAAGCTTTCCCTTCCTaGAGGCCCCAAGCTATGGCT +
Preference number: 4 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSKAFPS*RPQAMA
Trigger: AGCCATAGCTTGGGGCCTCCAGGAAGGGAAAGCTTT...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACCTAAGCGCGTTTATCTaGCAAGGCGGGGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYLSAFI*QGGALF
Trigger: GAAAAGGGCCCCGCCTTGCCAGATAAACGCGCTTAG...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTCTTTGTTGCTTTCCATaGTATAAATACCACCACTAT +
Preference number: 4 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPLCCFP*YKYHHY
Trigger: ATAGTGGTGGTATTTATACCATGGAAAGCAACAAAG...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACTCTTGGATGACTACGTaGGCGCAAGAGGGGAGACAC +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYSWMTT*AQEGRH
Trigger: GTGTCTCCCCTCTTGCGCCCACGTAGTCATCCAAGA...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATTACAATAGGGGTAACTaGAACATTCATAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYYNRGN*NIHSRR
Trigger: TCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTA...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACGTCTGTACTCTGGTGTaGGATGATTCAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYVCTLV*DDSGSR
Trigger: CCTGCTGCCTGAATCATCTCACACCAGAGTACAGAC...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGAGCCTGGCCAAAATGGTaGAACCTCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARAWPKW*NLVSTK
Trigger: TTTAGTAGAGACGAGGTTTCACCATTTTGGCCAGGC...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGAACCTCCACTAGCCAATaGATCTCAAGAACCCAGGTA +
Preference number: 4 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARTSTSQ*ISRTQV
Trigger: TACCTGGGTTCTTGAGATTCATTGGCTAGTGGAGGT...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACGGTTCATACTGGGGATaGCCTGATACTCCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYGSYWG*PDTPPH
Trigger: ATGAGGGGGAGTATCAGGGCATCCCCAGTATGAACC...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp AAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTAGTGCCCCACTGACACGATaGTGTCCTTCGCTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: KCVKWSVCGVARLTIPPSAPLTR*CPSLGS
Trigger: TGAACCAAGCGAAGGACAGCATCGTGTCAGTGGGGC...ACTAGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCATCCTGAATTTGGGATaGAGAGGTCTGTCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSILNLG*RGLSQH
Trigger: GTGCTGAGACAGACCTCTGCATCCCAAATTCAGGAT...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp AAGAGACAAAGTCTTTATTCCCATGAAATGGACATCCTAGTGGAGGGACACAGACCTTCCCACTTTGTCTaGCAGTCCTCCCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: KRQSLYSHEMDILVEGHRPSHFV*QSSPEE
Trigger: TTCTTCTGGGGAGGACTGGCAGACAAAGTGGGAAGG...TCTGTGTCCCTCCACTAGGATGTCCATTTCATGGGAATAAAGACTTTGTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACCCTTCCCACTTTGTCTaGCAGTCCTCCCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYPSHFV*QSSPEE
Trigger: TTCTTCTGGGGAGGACTGGCAGACAAAGTGGGAAGG...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCGTTCCCTGGCAATACTaGCAATGTCCCCAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSVPWQY*QCPQKV
Trigger: AACTTTCTGGGGACATTGGCAGTATTGCCAGGGAAC...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp ACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTATCATGGATTCACTGGTaGCGAACCAAAGGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: TPTNGSCYKLAPLFLRAVSWIHW*RTKGRN
Trigger: GTTTCTTCCTTTGGTTCGGCACCAGTGAATCCATGA...TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATCCAGGGAAGCCTGGCTaGCTAGGGCATTTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHPGKPG*LGHFRN
Trigger: ATTTCTAAAATGCCCTAGGCAGCCAGGCTTCCCTGG...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACCAAGAACGGTCCTTCTaGAGGGGACACGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYQERSF*RGHGWQ
Trigger: CTGCCATCCGTGTCCCCTGCAGAAGGACCGTTCTTG...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACTTGGAAATCCAGCCCTaGACAGGGAGCTGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYLEIQP*TGSCAK
Trigger: TTTGGCACAGCTCCCTGTGCAGGGCTGGATTTCCAA...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATCTGAGTCAATACAAATaGAGAAAGAAACCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYLSQYK*RKKPFV
Trigger: CACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAG...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTCTCTGGCAATGTCCTTaGCACCCTTCATCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPLWQCP*HPSSVK
Trigger: CTTCACTGATGAAGGGTGCCAAGGACATTGCCAGAG...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp AAGAGACAAAGTCTTTATTCCCATGAAATGGACATCCTAGTGGAGGGACACAGATCGCTTGGTTCATACTaGGGATGCCCTGATACTCCC +
Preference number: 4 (lower is better)
Translates to: KRQSLYSHEMDILVEGHRSLGSY*GCPDTP
Trigger: GGGAGTATCAGGGCATCCCCAGTATGAACCAAGCGA...TCTGTGTCCCTCCACTAGGATGTCCATTTCATGGGAATAAAGACTTTGTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp ACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTACTCCAACAAGAATCGTaGGCTTTCAGGCATGAATGT +
Preference number: 4 (lower is better)
Translates to: TPTNGSCYKLAPLFLRAVLQQES*AFRHEC
Trigger: ACATTCATGCCTGAAAGCCCACGATTCTTGTTGGAG...TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp ACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTACCCGGGCTCTCATGTTaGTGTCATGAATTAACTTCA +
Preference number: 4 (lower is better)
Translates to: TPTNGSCYKLAPLFLRAVPGLSC*CHELTS
Trigger: TGAAGTTAATTCATGACACCAACATGAGAGCCCGGG...TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGTCATCATGGATTCACTaGTGCCGAACCAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKASSWIH*CRTKGR
Trigger: TCTTCCTTTGGTTCGGCACCAGTGAATCCATGATGA...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTGCATGCCTATCATCATaGATTCACTGGTGCCGAACC +
Preference number: 4 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPACLSS*IHWCRT
Trigger: GGTTCGGCACCAGTGAATCCATGATGATAGGCATGC...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATGCATGCCTATCATCATaGATTCACTGGTGCCGAACC +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHACLSS*IHWCRT
Trigger: GGTTCGGCACCAGTGAATCCATGATGATAGGCATGC...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATCATTACATCAGAACCTaGGTTCGTGTGTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHHYIRT*VRVSGR
Trigger: CCTGCCTGACACACGAACCCAGGTTCTGATGTAATG...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCGACAGTGTGGGTAAGTaGCAGAATCAGGTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSDSVGK*QNQVGR
Trigger: TCTGCCTACCTGATTCTGCCACTTACCCACACTGTC...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACGAGCGCATTGAGCAGTaGGCCAGCCCTGGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHERIEQ*ASPGEA
Trigger: AGCTTCCCCAGGGCTGGCCCACTGCTCAATGCGCTC...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATGGGCCCTTTTCTGGCTaGGTGATGGTAACTGTCAAA +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHGPFSG*VMVTVK
Trigger: TTTGACAGTTACCATCACCCAGCCAGAAAAGGGCCC...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCACCACAAAGCTGTTTTaGACTTTGCACCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSTTKLF*TLHPCC
Trigger: GCAGCAGGGGTGCAAAGTCCAAAACAGCTTTGTGGT...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CTGGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTGGCACCCTTCATCAGTaGAGTCCTATCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: LGKCVKWSVCGVARLTIPGTLHQ*SPILVR
Trigger: TCTTACAAGGATAGGACTTCACTGATGAAGGGTGCC...AGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp CTGGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTGCTCGGTCCACAGCTTaGTTCACCTTCTTTACTGTT +
Preference number: 4 (lower is better)
Translates to: LGKCVKWSVCGVARLTIPARSTA*FTFFTV
Trigger: AACAGTAAAGAAGGTGAATCAAGCTGTGGACCGAGC...AGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACCTCAGTGGCTTCACTTaGGCCTTCGTCATCGTTGGC +
Preference number: 4 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYLSGFT*AFVIVG
Trigger: GCCAACGATGACGAAGGCTCAAGTGAAGCCACTGAG...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCAAGAGAGTTCCAGGCTaGGATGGTCAATCCATTGTA +
Preference number: 4 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSKRVPG*DGQSIV
Trigger: TACAATGGATTGACCATCTCAGCCTGGAACTCTCTT...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCAGACTGTCCAGGAGATaGGAAAAGATCCCTCTTAGG +
Preference number: 4 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSRLSRR*EKIPLR
Trigger: CCTAAGAGGGATCTTTTCTCATCTCCTGGACAGTCT...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTCTTGTAAAAATGAGTTaGGGCCGCCAGTGGCTCACG +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSLVKMS*GRQWLT
Trigger: CGTGAGCCACTGGCGGCCTCAACTCATTTTTACAAG...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATCTGTTACGCCATACCTaGAACAATGAAGGGACACAC +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHLLRHT*NNEGTH
Trigger: GTGTGTCCCTTCATTGTTTCAGGTATGGCGTAACAG...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCAGCTGCAGGCTTTGCTaGCTTAGCTCTGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSSCRLC*LSSEEK
Trigger: TTTCTCTTCAGAGCTAAGTCAGCAAAGCCTGCAGCT...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAACACCTCTACACCGTCTaGCATAAGAGCCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: CTGSYSESIQMQKETLCEHLYTV*HKSHAQ
Trigger: CTGGGCATGGCTCTTATGGCAGACGGTGTAGAGGTG...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp AAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTAGTTTCCGTACAGCTCGGTaGGGATCCGAACAAAACACC +
Preference number: 4 (lower is better)
Translates to: KCVKWSVCGVARLTIPPSFRTAR*GSEQNT
Trigger: GGTGTTTTGTTCGGATCCGCACCGAGCTGTACGGAA...ACTAGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATTTCTTTGAAAGGCTCTaGTATAACAGTGAGAATTAC +
Preference number: 4 (lower is better)
Translates to: APPSPVWCHMVFFERLCYFFERL*YNSENY
Trigger: GTAATTCTCACTGTTATAGCAGAGCCTTTCAAAGAA...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACAAGCTGAATGTCAACTaGGGGCCAGGTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHKLNVN*GPGGVG
Trigger: CCCCACCCCACCTGGCCCGCAGTTGACATTCAGCTT...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTATCAGCTCATACTGCTaGGCTAACTCTTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPISSYC*ANSSSS
Trigger: TGACGAGGAAGAGTTAGCCCAGCAGTATGAGCTGAT...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp AAGAGACAAAGTCTTTATTCCCATGAAATGGACATCCTAGTGGAGGGACACAGAAGAACACAGTGGGTATaGCTCCTCCAATCCCGAATC +
Preference number: 4 (lower is better)
Translates to: KRQSLYSHEMDILVEGHRRTQWV*LLQSRI
Trigger: GATTCGGGATTGGAGGAGCCATACCCACTGTGTTCT...TCTGTGTCCCTCCACTAGGATGTCCATTTCATGGGAATAAAGACTTTGTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCAGACTAGAGACAGTGTaGGTAAGTGGCAGAATCAGG +
Preference number: 4 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSRLETV*VSGRIR
Trigger: CCTGATTCTGCCACTTACCCACACTGTCTCTAGTCT...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGATGGAGATGCACTCCTaGCTTTTGCAGTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAMEMHS*LLQLFL
Trigger: CAGAAATAACTGCAAAAGCCAGGAGTGCATCTCCAT...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAAGGGGACTGTGCTTTCTaGCCTATTCCATGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: CTGSYSESIQMQKETLCEGDCAF*PIPCGL
Trigger: AAGCCCGCATGGAATAGGCCAGAAAGCACAGTCCCC...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACTGCCCCAGGAAAGCTTaGCCTTGCTTTTGTACACTG +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYCPRKA*PCFCTL
Trigger: CAGTGTACAAAAGCAAGGCCAAGCTTTCCTGGGGCA...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTCCTCCACAACAGGCATaGATGGGCCTTTCATCCCAA +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSPPQQA*MGLSSQ
Trigger: TTGGGATGAAAGGCCCATCCATGCCTGTTGTGGAGG...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATCCTGTGTCTATGCAGTaGGAGGCCAAGCATTCTTTA +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHPVSMQ*EAKHSL
Trigger: TAAAGAATGCTTGGCCTCCCACTGCATAGACACAGG...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 72 bp AGAAAGAAACCCTTTGTGAATCACATGAGGTTGAGCTaGCTAAGTCTTTCCCCTTCCTTGGACTTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RKKPFVNHMRLS*LSLSPSLDLGA
Trigger: TGCCCCTAAGTCCAAGGAAGGGGAAAGACTTAGCAAGCTCAACCTCATGTGATTCACAAAGGGTTTCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp ACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTATCAACTGATGGCCAATaGGAAGATGGGAAATTTTCA +
Preference number: 4 (lower is better)
Translates to: TPTNGSCYKLAPLFLRAVSTDGQ*EDGKFS
Trigger: TGAAAATTTCCCATCTTCTCATTGGCCATCAGTTGA...TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTCCATCTTATCTCAACTaGTGGCCAATGAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPPSYLN*WPMRRW
Trigger: CCATCTTCTCATTGGCCATCAGTTGAGATAAGATGG...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACGACCAAGAAGGTTTGTaGCCACAGACTGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYDQEGL*PQTVQE
Trigger: CTCCTGGACAGTCTGTGGTCACAAACCTTCTTGGTC...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACGGTGGGAGAATCACTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHGGRIT*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGTGATTCTCCCACC...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGGTCTGCAAAGATAATTaGCTCACCCACAAATCTTCA +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAVCKDN*LTHKSS
Trigger: TGAAGATTTGTGGGTGAGTCAATTATCTTTGCAGAC...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACGGAGATGGGCTGCTCTaGTTCCATACCAGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHGDGLL*FHTSCA
Trigger: GGCACAGCTGGTATGGAATCAGAGCAGCCCATCTCC...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACTTCCGTACAGCTCGGTaGGGATCCGAACAAAACACC +
Preference number: 4 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYFRTAR*GSEQNT
Trigger: GGTGTTTTGTTCGGATCCGCACCGAGCTGTACGGAA...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACGAAGCCAAAGCCTGTTaGCCTCCGGTCTGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHEAKAC*PPVCGV
Trigger: TACCCCACAGACCGGAGGGCAACAGGCTTTGGCTTC...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAAGGACGGCTGCTGCCTTaGATAGCGCATTTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: CTGSYSESIQMQKETLCEGRLLP*IAHLRS
Trigger: GCTTCTTAAATGCGCTATGCAAGGCAGCAGCCGTCC...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATCTTCTGGTCATTGGCTaGAAGTCTACAAGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHLLVIG*KSTRKV
Trigger: AACCTTCCTTGTAGACTTGCAGCCAATGACCAGAAG...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGCTTGGGTTGTTTGACTaGTGTCTTTGTTCTCCAATA +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKALGLFD*CLCSPI
Trigger: TATTGGAGAACAAAGACAGCAGTCAAACAACCCAAG...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCACAGGCCACACCACATaGTTTGGAAATGATTTGAGC +
Preference number: 4 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSTGHTT*FGNDLS
Trigger: GCTCAAATCATTTCCAAAGCATGTGGTGTGGCCTGT...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAACGTTCACACTCCCCCTaGACCCATTCCTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: CTGSYSESIQMQKETLCERSHSP*THSCSS
Trigger: TGAAGAACAGGAATGGGTGCAGGGGGAGTGTGAACG...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CTGGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTTGGCCAATGAGAAGATaGGAAATTTTCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LGKCVKWSVCGVARLTIPWPMRR*EIFTAS
Trigger: GGAGGCTGTGAAAATTTCCCATCTTCTCATTGGCCA...AGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp AAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTAGTAGTACGAGAACACAGTaGGTATGGCTCCTCCAATCC +
Preference number: 4 (lower is better)
Translates to: KCVKWSVCGVARLTIPPSSTRTQ*VWLLQS
Trigger: GGATTGGAGGAGCCATACCCACTGTGTTCTCGTACT...ACTAGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTTCATCATGGATTCACTaGTGCCGAACCAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPSSWIH*CRTKGR
Trigger: TCTTCCTTTGGTTCGGCACCAGTGAATCCATGATGA...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTCCACCCAGCCCTGTTTaGTGCCACATGGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSPPSPV*CHMVFF
Trigger: AAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGG...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTAGTGGGAGTGGTAAATaGAGGCAGAAGCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSSGSGK*RQKLSL
Trigger: GAGAGAGAGCTTCTGCCTCCATTTACCACTCCCACT...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACCCCGTGGGAATGTCCTaGCTGACCTCTTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYPVGMS*LTSFFQ
Trigger: TTGGAAGAAAGAGGTCAGCCAGGACATTCCCACGGG...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGATTTATTCCTGGCTTCTaGTCATTGGCTGCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARFIPGF*SLAASL
Trigger: TAGACTTGCAGCCAATGACCAGAAGCCAGGAATAAA...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACCCAAGGTCTGTACTCTaGTGTGAGATGATTCAGGCA +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYPRSVL*CEMIQA
Trigger: TGCCTGAATCATCTCACACCAGAGTACAGACCTTGG...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATATACTCAATGTGATGTaGCCTGTGTCTATGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHILNVM*PVSMQW
Trigger: CCACTGCATAGACACAGGCCACATCACATTGAGTAT...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTAGGCAAAGAATCCGTTaGCAGACATGCAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPRQRIR*QTCKSE
Trigger: TTCTGATTTGCATGTCTGTCAACGGATTCTTTGCCT...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTTTATTTTGTTTACCGTaGAGACCTTCTCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPLFCLP*RPSQAD
Trigger: GTCAGCCTGAGAAGGTCTTCACGGTAAACAAAATAA...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCTTATTTTGTTTACCGTaGAGACCTTCTCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSLFCLP*RPSQAD
Trigger: GTCAGCCTGAGAAGGTCTTCACGGTAAACAAAATAA...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGACATCCCGTCTTGTTGTaGAAAAACGAGCAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARHPVLL*KNEQFL
Trigger: TAAAAACTGCTCGTTTTTTCACAACAAGACGGGATG...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCATGTCCCCAGAAAGTTaGCAAAATAAATCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSMSPES*QNKSSR
Trigger: CCTACTGGATTTATTTTGTCAACTTTCTGGGGACAT...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGTTTAATTGGGCTTTCTaGCAGAAATCTTGCTTATGC +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAFNWAF*QKSCLC
Trigger: GCATAAGCAAGATTTCTGTCAGAAAGCCCAATTAAA...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGATCTCTCTCGGATCTCTaGTTTTCAAACATTCTGAAC +
Preference number: 4 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARSLSDL*FSNILN
Trigger: GTTCAGAATGTTTGAAAATCAGAGATCCGAGAGAGA...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAATGGTTCGGGTTTTCCTaGTGTTCTAGCCCTGATCAC +
Preference number: 4 (lower is better)
Translates to: CTGSYSESIQMQKETLCEWFGFS*CSSPDH
Trigger: GTGATCAGGGCTAGAACATCAGGAAAACCCGAACCA...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACGGCAGGAGAATTGCTTaGACCTGGGAGGCGGAAGTT +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHGRRIA*TWEAEV
Trigger: AACTTCCGCCTCCCAGGTTCAAGCAATTCTCCTGCC...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAAGGTAGATTACCCGCTTaGGTTGAAACCCGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: CTGSYSESIQMQKETLCEGRLPA*VETRLS
Trigger: ACTCAGACGGGTTTCAACTCAAGCGGGTAATCTACC...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTGTTCCTGGATCAGGATaGGGATACATAACTGCATGG +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSVPGSG*GYITAW
Trigger: CCATGCAGTTATGTATCCTCATCCTGATCCAGGAAC...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp AAGAGACAAAGTCTTTATTCCCATGAAATGGACATCCTAGTGGAGGGACACAGATCATCATCTTCATCATaGCCCTCAGTGGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: KRQSLYSHEMDILVEGHRSSSSS*PSVASL
Trigger: AAGTGAAGCCACTGAGGGGCATGATGAAGATGATGA...TCTGTGTCCCTCCACTAGGATGTCCATTTCATGGGAATAAAGACTTTGTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCGCATATTCATCGGACTaGAGAGGTTTAATGACATCA +
Preference number: 4 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSAYSSD*RGLMTS
Trigger: TGATGTCATTAAACCTCTGCAGTCCGATGAATATGC...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTTGTACAGACACAGCATaGCTATCATCATGGATTCAC +
Preference number: 4 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPCTDTA*LSSWIH
Trigger: GTGAATCCATGATGATAGGCATGCTGTGTCTGTACA...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR GCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCCCCCAAGCTATGGCTTaGCTGAAAATGCCTATAATA +
Preference number: 4 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSPQAMA*LKMPII
Trigger: TATTATAGGCATTTTCAGGCAAGCCATAGCTTGGGG...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATACCCCAAACATCCTTTaGAACTTCAAGACACTTGCA +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHTPNIL*NFKTLA
Trigger: TGCAAGTGTCTTGAAGTTGCAAAGGATGTTTGGGGT...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGAAGAGGGGAGACACTTTaGAACTTCAAACTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARRGETL*NFKLVS
Trigger: TGAAACTAGTTTGAAGTTGCAAAGTGTCTCCCCTCT...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACATCCCACATGGAGCATaGCCTTTCACAAGGATACGC +
Preference number: 4 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYIPHGA*PFTRIR
Trigger: GCGTATCCTTGTGAAAGGGCATGCTCCATGTGGGAT...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp AAGAGACAAAGTCTTTATTCCCATGAAATGGACATCCTAGTGGAGGGACACAGAAGCCTTCGTCATCGTTaGCCTCACCATTATAGGTTT +
Preference number: 4 (lower is better)
Translates to: KRQSLYSHEMDILVEGHRSLRHR*PHHYRF
Trigger: AAACCTATAATGGTGAGGCCAACGATGACGAAGGCT...TCTGTGTCCCTCCACTAGGATGTCCATTTCATGGGAATAAAGACTTTGTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACAGAACACAGTGGGTATaGCTCCTCCAATCCCGAATC +
Preference number: 4 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYRTQWV*LLQSRI
Trigger: GATTCGGGATTGGAGGAGCCATACCCACTGTGTTCT...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp ACACCCACTAATGGCTCCTGCTATAAACTGGCTCCGTTGTTTCTGAGAGCTGTATGTATTATCCCTGACTaGGTAGTTGAAACATCTCAT +
Preference number: 4 (lower is better)
Translates to: TPTNGSCYKLAPLFLRAVCIIPD*VVETSH
Trigger: ATGAGATGTTTCAACTACCCAGTCAGGGATAATACA...TACAGCTCTCAGAAACAACGGAGCCAGTTTATAGCAGGAGCCATTAGTGGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp AAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTAGTAGACACAATGTTCCCTaGCAATACTGCCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: KCVKWSVCGVARLTIPPSRHNVP*QYCQCP
Trigger: GGGACATTGGCAGTATTGCCAGGGAACATTGTGTCT...ACTAGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACCCTGAATCTGCTGTCTaGCAAGACCAAGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHPESAV*QDQGQL
Trigger: CAGCTGCCCTTGGTCTTGCCAGACAGCAGATTCAGG...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTCTGGCTTCTGGTCATTaGCTGCAAGTCTACAAGGAA +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSLASGH*LQVYKE
Trigger: TTCCTTGTAGACTTGCAGCCAATGACCAGAAGCCAG...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACTATGGGATTTATTCCTaGCTTCTGGTCATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYYGIYS*LLVIGC
Trigger: GCAGCCAATGACCAGAAGCCAGGAATAAATCCCATA...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACCAGAAAGTATTCCCCTaGACTGCTTTGGAAATGACC +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYQKVFP*TALEMT
Trigger: GGTCATTTCCAAAGCAGTCCAGGGGAATACTTTCTG...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CTGGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCATCCCGTCTTGTTGTaGAAAAACGAGCAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: LGKCVKWSVCGVARLTIPHPVLL*KNEQFL
Trigger: TAAAAACTGCTCGTTTTTTCACAACAAGACGGGATG...AGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTAAGAGAGTTCCAGGCTaGGATGGTCAATCCATTGTA +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSKRVPG*DGQSIV
Trigger: TACAATGGATTGACCATCTCAGCCTGGAACTCTCTT...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CTGGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTAAGTCTTTATTCCCATaGAATGGACATCCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: LGKCVKWSVCGVARLTIPKSLFP*NGHPSG
Trigger: TCCACTAGGATGTCCATTTCATGGGAATAAAGACTT...AGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAATGTGCACGGGGAAAGTaGGAACTAGAGATGTTCAAC +
Preference number: 4 (lower is better)
Translates to: CTGSYSESIQMQKETLCECARGK*ELEMFN
Trigger: GTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACA...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCAGAGCCTTTAGTGCATaGACAGATCAGGTATATTAC +
Preference number: 4 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSRAFSA*TDQVYY
Trigger: GTAATATACCTGATCTGTTCATGCACTAAAGGCTCT...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACTCCTGCACTGCCTGCTaGAGGCTATTATTTGTTTTA +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYSCTAC*RLLFVL
Trigger: TAAAACAAATAATAGCCTTCAGCAGGCAGTGCAGGA...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATCAAAGGTTATCTCAATaGCTGAATAGTTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHQRLSQ*LNSSCT
Trigger: AGTGCAGGAACTATTCAGTCATTGAGATAACCTTTG...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACATTACCCGCTTGAGTTaGAACCCGTCTGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYITRLS*NPSESE
Trigger: TTCAGACTCAGACGGGTTTCAACTCAAGCGGGTAAT...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGACAGCTGTACTTAAGATaGAAACTCCAAAACCTGAAA +
Preference number: 4 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARQLYLR*KLQNLK
Trigger: TTTCAGGTTTTGGAGTTTTCATCTTAAGTACAGCTG...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCCAAACAAACAACCTGTaGAAAATCACAAAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSQTNNL*KITKGQ
Trigger: TTGCCCCTTTGTGATTTTGCACAGGTTGTTTGTTTG...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGAGTTATTTCTGCACATaGTGCATTCAACTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKASYFCT*CIQLKD
Trigger: GTCTTTTAGTTGAATGCAGCATGTGCAGAAATAACT...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACAGTTGCGTGTTTAGGTaGCAGTGGCCTGCTACACTG +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHSCVFR*QWPATL
Trigger: CAGTGTAGCAGGCCACTGGCACCTAAACACGCAACT...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAATTCTGGCCTATTCCATaGGGGCTTCCCAAACAACTT +
Preference number: 4 (lower is better)
Translates to: CTGSYSESIQMQKETLCEFWPIP*GLPKQL
Trigger: AAGTTGTTTGGGAAGCCCGCATGGAATAGGCCAGAA...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACGCTCTGGAGATGGGCTaGTCTGATTCCATACCAGCT +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHALEMG*SDSIPA
Trigger: AGCTGGTATGGAATCAGAGCAGCCCATCTCCAGAGC...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACTCGCTTGGTTCATACTaGGGATGCCCTGATACTCCC +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHSLGSY*GCPDTP
Trigger: GGGAGTATCAGGGCATCCCCAGTATGAACCAAGCGA...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGACTCTCTCCACATTTCTaGTTAGCAATGCATATTCAT +
Preference number: 4 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARLSPHF*LAMHIH
Trigger: ATGAATATGCATTGCTAACCAGAAATGTGGAGAGAG...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp AAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTAGTAGTTCCAGGCTGAGATaGTCAATCCATTGTACAGAC +
Preference number: 4 (lower is better)
Translates to: KCVKWSVCGVARLTIPPSSSRLR*SIHCTD
Trigger: GTCTGTACAATGGATTGACCATCTCAGCCTGGAACT...ACTAGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTTCACACTTGTTGACTTaGTTACTTCACTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPSHLLT*LLHFVG
Trigger: TCCCACAAAGTGAAGTAACCAAGTCAACAAGTGTGA...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCAAAGTGGTCTGTTTGTaGAGTTGCAAGGTTAACTAT +
Preference number: 4 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSKVVCL*SCKVNY
Trigger: ATAGTTAACCTTGCAACTCCACAAACAGACCACTTT...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTTCAGAACCTGTTTTCTaGATGGCTTATCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSSEPVF*MAYLLR
Trigger: CCTCAGCAGATAAGCCATCCAGAAAACAGGTTCTGA...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACCACAACAGGCATGGATaGGCCTTTCATCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHHNRHG*AFHPKC
Trigger: GCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 72 bp TCTTTTGATGGGTTGATGGAGATGCACTCCTGGCTTTaGCAGTTATTTCTGCACATGCTGCATTCAACTAAA +
Preference number: 4 (lower is better)
Translates to: SFDGLMEMHSWL*QLFLHMLHSTK
Trigger: TTTAGTTGAATGCAGCATGTGCAGAAATAACTGCAAAAGCCAGGAGTGCATCTCCATCAACCCATCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 72 bp AAATGCAGAAAGAAACCCTTTGTGAATCACATGAGGTaGAGCTTGCTAAGTCTTTCCCCTTCCTTGGACTTA +
Preference number: 4 (lower is better)
Translates to: KCRKKPFVNHMR*SLLSLSPSLDL
Trigger: TAAGTCCAAGGAAGGGGAAAGACTTAGCAAGCTCAACCTCATGTGATTCACAAAGGGTTTCTTTCTGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp AAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTAGTGAAGTAGGTGTTCACTaGAGTTACATCCTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: KCVKWSVCGVARLTIPPSEVGVH*SYILKG
Trigger: ACCTTTGAGGATGTAACTTCAGTGAACACCTACTTC...ACTAGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR TCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTCCATACCTGAAACAATaGAGGGACACACAATACATC +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSPYLKQ*RDTQYI
Trigger: GATGTATTGTGTGTCCCTTCATTGTTTCAGGTATGG...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAAGGTTATCTCAATGACTaGATAGTTCCTGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: CTGSYSESIQMQKETLCEGYLND*IVPALP
Trigger: AGGCAGTGCAGGAACTATTCAGTCATTGAGATAACC...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACGCATATTCATCGGACTaGAGAGGTTTAATGACATCA +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYAYSSD*RGLMTS
Trigger: TGATGTCATTAAACCTCTGCAGTCCGATGAATATGC...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAATCATGGATTCACTGGTaGCGAACCAAAGGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: CTGSYSESIQMQKETLCESWIHW*RTKGRN
Trigger: GTTTCTTCCTTTGGTTCGGCACCAGTGAATCCATGA...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACTCATTCTGTTTTCCTTaGCCTCATTTAAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYSFCFP*PHLSPP
Trigger: TGGAGGACTTAAATGAGGGCAAGGAAAACAGAATGA...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTCAACTTCAAGACACTTaGAACAACACGCACCAGTTT +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSQLQDT*NNTHQF
Trigger: AAACTGGTGCGTGTTGTTGCAAGTGTCTTGAAGTTG...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CTGGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCTCTCTCCACATTTCTaGTTAGCAATGCATATTCAT +
Preference number: 4 (lower is better)
Translates to: LGKCVKWSVCGVARLTIPLSPHF*LAMHIH
Trigger: ATGAATATGCATTGCTAACCAGAAATGTGGAGAGAG...AGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGAGAAAATGGGTACATGTaGAAGAAGAAAAACATACAG +
Preference number: 4 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARENGYM*KKKNIQ
Trigger: CTGTATGTTTTTCTTCTTCCACATGTACCCATTTTC...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAATGTCTTCTACAATGCTaGAGAGTGGAGAGCAGACTA +
Preference number: 4 (lower is better)
Translates to: CTGSYSESIQMQKETLCECLLQC*RVESRL
Trigger: TAGTCTGCTCTCCACTCTCCAGCATTGTAGAAGACA...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACAGGCAAAGAATCCGTTaGCAGACATGCAAATCAGAA +
Preference number: 4 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYRQRIR*QTCKSE
Trigger: TTCTGATTTGCATGTCTGTCAACGGATTCTTTGCCT...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACGAAGTAGGTGTTCACTaGAGTTACATCCTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYEVGVH*SYILKG
Trigger: ACCTTTGAGGATGTAACTTCAGTGAACACCTACTTC...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACAGTGCAATATCCTGCTaGGATTATTTAAGGGAACAA +
Preference number: 4 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYSAISC*DYLREQ
Trigger: TTGTTCCCTTAAATAATCTCAGCAGGATATTGCACT...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR TCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTGAAAGTGATGAGCTTTaGCTATATGTTGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSESDEL*LYVAFA
Trigger: AGCAAAGGCAACATATAGTCAAAGCTCATCACTTTC...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACGTTCCCTGGCAATACTaGCAATGTCCCCAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHVPWQY*QCPQKV
Trigger: AACTTTCTGGGGACATTGGCAGTATTGCCAGGGAAC...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp AAGAGACAAAGTCTTTATTCCCATGAAATGGACATCCTAGTGGAGGGACACAGAGGTTACTTCACTTTGTaGGATATTTCTACAAGGCAA +
Preference number: 4 (lower is better)
Translates to: KRQSLYSHEMDILVEGHRGYFTL*DISTRQ
Trigger: TTGCCTTGTAGAAATATCCCACAAAGTGAAGTAACC...TCTGTGTCCCTCCACTAGGATGTCCATTTCATGGGAATAAAGACTTTGTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATAGTAGCATCACAGTTTaGAAAGATAACAATGCATTC +
Preference number: 4 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHSSITV*KDNNAF
Trigger: GAATGCATTGTTATCTTTCCAAACTGTGATGCTACT...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAACTTTCCCTGTGCGGTTaGTATCTTTCAAATGCATCT +
Preference number: 4 (lower is better)
Translates to: CTGSYSESIQMQKETLCELSLCG*YLSNAS
Trigger: AGATGCATTTGAAAGATACCAACCGCACAGGGAAAG...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTTTGTTTCTTTCCCTGTaGGGTTGGTATCTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSLFLSL*GWYLSN
Trigger: ATTTGAAAGATACCAACCGCACAGGGAAAGAAACAA...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp AAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTAGTTTTAATCCTCAAAAATaGAAAGAAAGCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KCVKWSVCGVARLTIPPSFNPQK*KESQVQ
Trigger: CTGCACCTGGCTTTCTTTCCATTTTTGAGGATTAAA...ACTAGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTGCATACATTACCTCATaGGCACAGATAATGGTAAAA +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSAYITS*AQIMVK
Trigger: TTTTACCATTATCTGTGCCCATGAGGTAATGTATGC...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 72 bp TCGGGATATTTGTCAAAACACATTTGGTCAAACATTTaGGCAATTGGAAATCAGACACAGAGGAGCATACAG +
Preference number: 4 (lower is better)
Translates to: SGYLSKHIWSNI*AIGNQTQRSIQ
Trigger: CTGTATGCTCCTCTGTGTCTGATTTCCAATTGCCAAAATGTTTGACCAAATGTGTTTTGACAAATATCCCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTAACAGAATTTACACATaGAGCACACGTATATACAGT +
Preference number: 4 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSNRIYT*STRIYS
Trigger: ACTGTATATACGTGTGCTGCATGTGTAAATTCTGTT...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACAGTTTGATAGATTTATaGTGTACACGAGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHSLIDL*CTRAIP
Trigger: TGGGATGGCTCGTGTACAGCATAAATCTATCAAACT...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACACCTGGGATAGAATGTaGTACATACAGAATTCACAG +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHTWDRM*YIQNSQ
Trigger: CTGTGAATTCTGTATGTACCACATTCTATCCCAGGT...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACTCTTCTCAGCACAAATaGAATAATGTGCCGACTTAT +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHSSQHK*NNVPTY
Trigger: ATAAGTCGGCACATTATTGCATTTGTGCTGAGAAGA...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR GCA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACCATAGGCTTAATTATTaGACACAGCAGTGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: HGINTTTIADLKLQKYCHHRLNY*TQQCLN
Trigger: ATTGAGACACTGCTGTGTGCAATAATTAAGCCTATG...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
3UTR CAA 72 bp GTTATCTGGCATATAAATGTATACACAATTCCAAGTTaGATAGATTTATGCTGTACACGAGCCATCCCACAT +
Preference number: 4 (lower is better)
Translates to: VIWHINVYTIPS*IDLCCTRAIPH
Trigger: ATGTGGGATGGCTCGTGTACAGCATAAATCTATCAAACTTGGAATTGTGTATACATTTATATGCCAGATAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS GCA 90 bp AACGCTCCAGCCGTCGGACACCCTTGCCCTGAGTGGTGTCAGCACTaGAGCCGCCTCAGTGCGGGCGCCGCTCCGGCTCGCTTCCCCGGG +
Preference number: 5 (lower is better)
Translates to: NAPAVGHPCPEWCQH*SRLSAGAAPARFPG
Trigger: CCCGGGGAAGCGAGCCGGAGCGGCGCCCGCACTGAGGCGGCTGCAGTGCTGACACCACTCAGGGCAAGGGTGTCCGACGGCTGGAGCGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CCA 90 bp GGTTCAAAACAGAACGCTCCAGCCGTCGGACACCCTTGCCCTGAGTaGTGTCAGCACTGCAGCCGCCTCAGTGCGGGCGCCGCTCCGGCT +
Preference number: 5 (lower is better)
Translates to: GSKQNAPAVGHPCPE*CQHCSRLSAGAAPA
Trigger: AGCCGGAGCGGCGCCCGCACTGAGGCGGCTGCAGTGCTGACACCACTCAGGGCAAGGGTGTCCGACGGCTGGAGCGTTCTGTTTTGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS GCA 90 bp TCCACTTTGGGTTCAAAACAGAACGCTCCAGCCGTCGGACACCCTTaGCCTGAGTGGTGTCAGCACTGCAGCCGCCTCAGTGCGGGCGCC +
Preference number: 5 (lower is better)
Translates to: STLGSKQNAPAVGHP*PEWCQHCSRLSAGA
Trigger: GGCGCCCGCACTGAGGCGGCTGCAGTGCTGACACCACTCAGGGCAAGGGTGTCCGACGGCTGGAGCGTTCTGTTTTGAACCCAAAGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS TCA 90 bp CAGCTCCCGCCGGTCCTTGTACTCATCGCCCTTGGGCTGCCCCACTaGCACGATGCTGTCCTTCGCTTGGTTCATACTGGGGATGCCCTG +
Preference number: 5 (lower is better)
Translates to: QLPPVLVLIALGLPH*HDAVLRLVHTGDAL
Trigger: CAGGGCATCCCCAGTATGAACCAAGCGAAGGACAGCATCGTGTCAGTGGGGCAGCCCAAGGGCGATGAGTACAAGGACCGGCGGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS GCA 90 bp GCCGGTCCTTGTACTCATCGCCCTTGGGCTGCCCCACTGACACGATaGTGTCCTTCGCTTGGTTCATACTGGGGATGCCCTGATACTCCC +
Preference number: 5 (lower is better)
Translates to: AGPCTHRPWAAPLTR*CPSLGSYWGCPDTP
Trigger: GGGAGTATCAGGGCATCCCCAGTATGAACCAAGCGAAGGACAGCATCGTGTCAGTGGGGCAGCCCAAGGGCGATGAGTACAAGGACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS GCA 90 bp TCTGATTCCAGCTCCCGCCGGTCCTTGTACTCATCGCCCTTGGGCTaGCCCACTGACACGATGCTGTCCTTCGCTTGGTTCATACTGGGG +
Preference number: 5 (lower is better)
Translates to: SDSSSRRSLYSSPLG*PTDTMLSFAWFILG
Trigger: CCCCAGTATGAACCAAGCGAAGGACAGCATCGTGTCAGTGGGGCAGCCCAAGGGCGATGAGTACAAGGACCGGCGGGAGCTGGAATCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS-3UTR CAA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTCCAAAGCCAGCAGCCTaGCGTTCACACTCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPPKPAA*RSHSPC
Trigger: GCAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGG...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS CCA 90 bp TCCTTTCTGATTCCAGCTCCCGCCGGTCCTTGTACTCATCGCCCTTaGGCTGCCCCACTGACACGATGCTGTCCTTCGCTTGGTTCATAC +
Preference number: 5 (lower is better)
Translates to: SFLIPAPAGPCTHRP*AAPLTRCCPSLGSY
Trigger: GTATGAACCAAGCGAAGGACAGCATCGTGTCAGTGGGGCAGCCCAAGGGCGATGAGTACAAGGACCGGCGGGAGCTGGAATCAGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS-3UTR CAA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGTCTCTGGCAATGTCCTaGGCACCCTTCATCAGTGAA +
Preference number: 5 (lower is better)
Translates to: ERREGHVADSGPVGMSWLSLAMS*APFISE
Trigger: TTCACTGATGAAGGGTGCCAAGGACATTGCCAGAGA...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTGTCACCTTAATTGTCTaGCCCCAAAGAGCCCCACCC +
Preference number: 5 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPVTLIV*PQRAPP
Trigger: GGGTGGGGCTCTTTGGGGCAAGACAATTAAGGTGAC...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGCCACCTTTGCAGTTTTaGGTTCGGGTTTTCCTGATG +
Preference number: 5 (lower is better)
Translates to: ERREGHVADSGPVGMSWLPPLQF*VRVFLM
Trigger: CATCAGGAAAACCCGAACCAAAAACTGCAAAGGTGG...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGTCTTTCCCTGTGCGGTaGGTATCTTTCAAATGCATC +
Preference number: 5 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLSFPVR*VSFKCI
Trigger: GATGCATTTGAAAGATACCAACCGCACAGGGAAAGA...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGATGCACTCCTGGCTTTaGCAGTTATTTCTGCACATG +
Preference number: 5 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLMHSWL*QLFLHM
Trigger: CATGTGCAGAAATAACTGCAAAAGCCAGGAGTGCAT...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGAGCTCCCGCCGGTCCTaGTACTCATCGCCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKASSRRS*YSSPLG
Trigger: GCCCAAGGGCGATGAGTACAAGGACCGGCGGGAGCT...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGACCATGACCGCATTCTaGGATTATCAGCTCATACTG +
Preference number: 5 (lower is better)
Translates to: ERREGHVADSGPVGMSWLTMTAF*DYQLIL
Trigger: CAGTATGAGCTGATAATCCAAGAATGCGGTCATGGT...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGCTCATTCTGTTTTCCTaGCCCTCATTTAAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: ERREGHVADSGPVGMSWLLILFS*PSFKSS
Trigger: GGAGGACTTAAATGAGGGCAAGGAAAACAGAATGAG...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTGTGCCCCAGGAAAGCTaGGCCTTGCTTTTGTACACT +
Preference number: 5 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPVPQES*ALLLYT
Trigger: AGTGTACAAAAGCAAGGCCAAGCTTTCCTGGGGCAC...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS TCA 90 bp AGCCAAAGCCTGTTGCCCTCCGGTCTGTGGGGTACAGTTCCACAGTaGCCACGTCAAGAGAGTTCCAGGCTGAGATGGTCAATCCATTGT +
Preference number: 5 (lower is better)
Translates to: SQSLLPSGLWGTVPQ*PRQESSRLRWSIHC
Trigger: ACAATGGATTGACCATCTCAGCCTGGAACTCTCTTGACGTGGTCACTGTGGAACTGTACCCCACAGACCGGAGGGCAACAGGCTTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTCCTCAGTGGCTTCACTaGAGCCTTCGTCATCGTTGG +
Preference number: 5 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSPQWLH*SLRHRW
Trigger: CCAACGATGACGAAGGCTCAAGTGAAGCCACTGAGG...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp GAGAGGCGAGAAGGTCATGTAGCTGACAGCGGGCCCGTGGGAATGTCCTGGCTGAGCTTGGCCTTGCTTTaGTACACTGCTAGAATTAAG +
Preference number: 5 (lower is better)
Translates to: ERREGHVADSGPVGMSWLSLALL*YTARIK
Trigger: CTTAATTCTAGCAGTGTACAAAAGCAAGGCCAAGCT...CAGCCAGGACATTCCCACGGGCCCGCTGTCAGCTACATGACCTTCTCGCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCAAAGGAGTTTCCTTCTaGGATGACTACGTGGGCGCA +
Preference number: 5 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPKGVSF*DDYVGA
Trigger: TGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTT...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGCAAACATTTTGGCAATaGGAAATCAGACACAGAGGA +
Preference number: 5 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLQTFWQ*EIRHRG
Trigger: TCCTCTGTGTCTGATTTCCAATTGCCAAAATGTTTG...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS TCA 90 bp ATGGCAAGACTCTGCGTCTCCGGTCTGTGGGGTACAGTTCCACAGTaGCCACGTCAAGAGAGTTCCAGGCTGAGATGGTCAATCCATTGT +
Preference number: 5 (lower is better)
Translates to: MARLCVSGLWGTVPQ*PRQESSRLRWSIHC
Trigger: ACAATGGATTGACCATCTCAGCCTGGAACTCTCTTGACGTGGTCACTGTGGAACTGTACCCCACAGACCGGAGACGCAGAGTCTTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS CCA 90 bp GCCATCCAGATCCTGAATTTGGGATGCAGAGGTCTGTCTCAGCACTaGGTAACACGAAGCCAACGACAAACACCTCTACACCGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: AIQILNLGCRGLSQH*VTRSQRQTPLHRLP
Trigger: TGGCAGACGGTGTAGAGGTGTTTGTCGTTGGCTTCGTGTTACCCAGTGCTGAGACAGACCTCTGCATCCCAAATTCAGGATCTGGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS-3UTR CAA 90 bp CTGGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTAGCTCCCGCCGGTCCTaGTACTCATCGCCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LGKCVKWSVCGVARLTIPSSRRS*YSSPLG
Trigger: GCCCAAGGGCGATGAGTACAAGGACCGGCGGGAGCT...AGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTCCTGGCTTCTGGTCATaGGCTGCAAGTCTACAAGGA +
Preference number: 5 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSPGFWS*AASLQG
Trigger: TCCTTGTAGACTTGCAGCCAATGACCAGAAGCCAGG...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTGCCCCAAGCTATGGCTaGCCTGAAAATGCCTATAAT +
Preference number: 5 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPAPSYG*PENAYN
Trigger: ATTATAGGCATTTTCAGGCAAGCCATAGCTTGGGGC...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CCCTGCACAGGGAGCTGTGCCAAAGCCAGCAGCCTTGCGTTCACACTCCCCCTGTCAGAGTTTCAGAAGTaGTTGCAATACTGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: PCTGSCAKASSLAFTLPLSEFQK*LQYWCF
Trigger: AAAACACCAGTATTGCAACAACTTCTGAAACTCTGA...CAGGGGGAGTGTGAACGCAAGGCTGCTGGCTTTGGCACAGCTCCCTGTGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS GCA 90 bp CGAGGTACACTATGCTGCCTAGCCATCCAGATCCTGAATTTGGGATaGAGAGGTCTGTCTCAGCACTGGGTAACACGAAGCCAACGACAA +
Preference number: 5 (lower is better)
Translates to: RGTLCCLAIQILNLG*RGLSQHWVTRSQRQ
Trigger: TTGTCGTTGGCTTCGTGTTACCCAGTGCTGAGACAGACCTCTGCATCCCAAATTCAGGATCTGGATGGCTAGGCAGCATAGTGTACCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS-3UTR CAA 90 bp CACAACAGGCATGGATGGGCCTTTCATCCCAAGTGCCCCAGGAAAGCTTGGCCTATCATCTTCTTCATCTaGGAACCGACTGTAGGACCT +
Preference number: 5 (lower is better)
Translates to: HNRHGWAFHPKCPRKAWPIIFFI*EPTVGP
Trigger: AGGTCCTACAGTCGGTTCCAAGATGAAGAAGATGAT...AGGCCAAGCTTTCCTGGGGCACTTGGGATGAAAGGCCCATCCATGCCTGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGATTGTACTCATCGCCCTaGGGCTGCCCCACTGACACG +
Preference number: 5 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARLYSSP*GCPTDT
Trigger: CGTGTCAGTGGGGCAGCCCAAGGGCGATGAGTACAA...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATAGGATGGGGATTGATTaGGTGATGCTGACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: APPSPVWCHMVFFERLCYRMGID*VMLTRE
Trigger: CTCTCTGGTCAGCATCACCAAATCAATCCCCATCCT...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCTCCCAATCCTTTATTTaGTGCACGGGGAAAGTGAGA +
Preference number: 5 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPSQSFI*CTGKVR
Trigger: TCTCACTTTCCCCGTGCACAAAATAAAGGATTGGGA...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTCACATGAGGTTGAGCTaGCTAAGTCTTTCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSHMRLS*LSLSPS
Trigger: GGAAGGGGAAAGACTTAGCAAGCTCAACCTCATGTG...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS CCA 90 bp CTTCATCATGCCCCTCAGTGGCTTCACTTGAGCCTTCGTCATCGTTaGCCTCACCATTATAGGTTTCTCCAGCCGGGTAGTAGTCATCAT +
Preference number: 5 (lower is better)
Translates to: LHHAPQWLHLSLRHR*PHHYRFLQPGSSHH
Trigger: ATGATGACTACTACCCGGCTGGAGAAACCTATAATGGTGAGGCCAACGATGACGAAGGCTCAAGTGAAGCCACTGAGGGGCATGATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS-3UTR CAA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCTTTCTGACAGAAATCTaGCTTATGCAGCACACTCAG +
Preference number: 5 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPFLTEI*LMQHTQ
Trigger: CTGAGTGTGCTGCATAAGCAAGATTTCTGTCAGAAA...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACGGAGCCAGGAGCGCATaGAGCAGTGGGCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYGARSA*SSGPAL
Trigger: CAGGGCTGGCCCACTGCTCAATGCGCTCCTGGCTCC...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTGCAACTTCAAGACACTaGCAACAACACGCACCAGTT +
Preference number: 5 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSATSRH*QQHAPV
Trigger: AACTGGTGCGTGTTGTTGCAAGTGTCTTGAAGTTGC...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp AGGCTGCCTAGTCACTCCCCAGGCACCACAAAGCTGTTTTGGACTTTGCACCCCAAGAGGGGAGACACTTaGCAACTTCAAACTAGTTTC +
Preference number: 5 (lower is better)
Translates to: RLPSHSPGTTKLFWTLHPKRGDT*QLQTSF
Trigger: GAAACTAGTTTGAAGTTGCAAAGTGTCTCCCCTCTT...GGGGTGCAAAGTCCAAAACAGCTTTGTGGTGCCTGGGGAGTGACTAGGCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCCCTCAGTGGCTTCACTaGAGCCTTCGTCATCGTTGG +
Preference number: 5 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSPQWLH*SLRHRW
Trigger: CCAACGATGACGAAGGCTCAAGTGAAGCCACTGAGG...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp AAGAGACAAAGTCTTTATTCCCATGAAATGGACATCCTAGTGGAGGGACACAGATTGTACTCATCGCCCTaGGGCTGCCCCACTGACACG +
Preference number: 5 (lower is better)
Translates to: KRQSLYSHEMDILVEGHRLYSSP*GCPTDT
Trigger: CGTGTCAGTGGGGCAGCCCAAGGGCGATGAGTACAA...TCTGTGTCCCTCCACTAGGATGTCCATTTCATGGGAATAAAGACTTTGTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATTTTTCTTTTGATGGGTaGATGGAGATGCACTCCTGG +
Preference number: 5 (lower is better)
Translates to: APPSPVWCHMVFFERLCYFSFDG*MEMHSW
Trigger: CCAGGAGTGCATCTCCATCAACCCATCAAAAGAAAA...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTAGGACTGAATGTGAGTaGGGTGCCTTAAAACCCAAT +
Preference number: 5 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSRTECE*GALKPN
Trigger: ATTGGGTTTTAAGGCACCCAACTCACATTCAGTCCT...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCAGGTGGGAGAATCACTaGAACCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSRWENH*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGTGATTCTCCCACCT...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATACACCAATATCCCAGTaGTCTTTCTGTGATACCAGG +
Preference number: 5 (lower is better)
Translates to: APPSPVWCHMVFFERLCYTPISQ*SFCDTR
Trigger: CCTGGTATCACAGAAAGACAACTGGGATATTGGTGT...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp GCCCCACCCAGCCCTGTTTGGTGCCACATGGTTTTCTTTGAAAGGCTCTGCTATAACCCCAAACATCCTTaGCAACTTCAAGACACTTGC +
Preference number: 5 (lower is better)
Translates to: APPSPVWCHMVFFERLCYNPKHP*QLQDTC
Trigger: GCAAGTGTCTTGAAGTTGCAAAGGATGTTTGGGGTT...ATAGCAGAGCCTTTCAAAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS TCA 90 bp TGTGGGGTACAGTTCCACAGTGACCACGTCAAGAGAGTTCCAGGCTaGGATGGTCAATCCATTGTACAGACACAGCATGCCTATCATCAT +
Preference number: 5 (lower is better)
Translates to: CGVQFHSDHVKRVPG*DGQSIVQTQHAYHH
Trigger: ATGATGATAGGCATGCTGTGTCTGTACAATGGATTGACCATCTCAGCCTGGAACTCTCTTGACGTGGTCACTGTGGAACTGTACCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS-3UTR CAA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTGTTACAGATTTGAACTaGACCCCTATGAATCTGCCA +
Preference number: 5 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSVTDLN*TPMNLP
Trigger: TGGCAGATTCATAGGGGTCAAGTTCAAATCTGTAAC...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGAAGGACGGCTGCTGCCTaGCATAGCGCATTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARRTAAA*HSAFKK
Trigger: CTTCTTAAATGCGCTATGCAAGGCAGCAGCCGTCCT...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCCCCACCCAGCCCTGTTaGGTGCCACATGGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSPTQPC*VPHGFL
Trigger: AAGAAAACCATGTGGCACCAAACAGGGCTGGGTGGG...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTAGCACACTCAGATTTTaGCTGCTAATTGCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSSTLRF*LLIAEL
Trigger: AAGCTCTGCAATTAGCAGCAAAAATCTGAGTGTGCT...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACTGGCTCTGTGACTGGTaGGTGAGAGACGGGCGACAA +
Preference number: 5 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYWLCDW*VRDGRQ
Trigger: TTGTCGCCCGTCTCTCACCAACCAGTCACAGAGCCA...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp AAGAGACAAAGTCTTTATTCCCATGAAATGGACATCCTAGTGGAGGGACACAGAGATGCTGTCCTTCGCTaGGTTCATACTGGGGATGCC +
Preference number: 5 (lower is better)
Translates to: KRQSLYSHEMDILVEGHRDAVLR*VHTGDA
Trigger: GGCATCCCCAGTATGAACCAAGCGAAGGACAGCATC...TCTGTGTCCCTCCACTAGGATGTCCATTTCATGGGAATAAAGACTTTGTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGGAGATGGTCAATCCATaGTACAGACACAGCATGCCT +
Preference number: 5 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAEMVNP*YRHSMP
Trigger: AGGCATGCTGTGTCTGTACAATGGATTGACCATCTC...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAAAGAAGCCAAAGCCTGTaGCCCTCCGGTCTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: CTGSYSESIQMQKETLCERSQSL*PSGLWG
Trigger: ACCCCACAGACCGGAGGGCAACAGGCTTTGGCTTCT...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGGGGTACTTTCTTGGGTaGTTTGACTGCTGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAGYFLG*FDCCLC
Trigger: ACAAAGACAGCAGTCAAACAACCCAAGAAAGTACCC...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGACTGTGCTCTGCAGCTaGGGAGATGTTTTATGCATT +
Preference number: 5 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKATVLCS*GDVLCI
Trigger: AATGCATAAAACATCTCCCAAGCTGCAGAGCACAGT...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp TTCAGGAGTCAAACGCTGAGCTCTCAGACTTCTGCTCTGGAGATGGGCTGCTCTAACCTGAACTCTGATTaGGTGAGATTTGTCTATTTG +
Preference number: 5 (lower is better)
Translates to: FRSQTLSSQTSALEMGCSNLNSD*VRFVYL
Trigger: CAAATAGACAAATCTCACCAAATCAGAGTTCAGGTT...AGAGCAGCCCATCTCCAGAGCAGAAGTCTGAGAGCTCAGCGTTTGACTCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGGCTAGAATTAAGAGGTaGTCGACCAGAGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAARIKR*STRGGK
Trigger: TTTTCCTCCTCTGGTCGACAACCTCTTAATTCTAGC...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp AAGAGACAAAGTCTTTATTCCCATGAAATGGACATCCTAGTGGAGGGACACAGAGGCTCGGTCCACAGCTaGATTCACCTTCTTTACTGT +
Preference number: 5 (lower is better)
Translates to: KRQSLYSHEMDILVEGHRGSVHS*IHLLYC
Trigger: ACAGTAAAGAAGGTGAATCAAGCTGTGGACCGAGCC...TCTGTGTCCCTCCACTAGGATGTCCATTTCATGGGAATAAAGACTTTGTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp ACGTATATACAGTACAATAGGGGTAACTGGAACATTCATAGCAGGAGATCTTACGATGCTGTCCTTCGCTaGGTTCATACTGGGGATGCC +
Preference number: 5 (lower is better)
Translates to: TYIQYNRGNWNIHSRRSYDAVLR*VHTGDA
Trigger: GGCATCCCCAGTATGAACCAAGCGAAGGACAGCATC...GTAAGATCTCCTGCTATGAATGTTCCAGTTACCCCTATTGTACTGTATATACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTATCCAGATCCTGAATTaGGGATGCAGAGGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPIQILN*GCRGLS
Trigger: AGACAGACCTCTGCATCCCAAATTCAGGATCTGGAT...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp CTGGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTGAGATGGTCAATCCATaGTACAGACACAGCATGCCT +
Preference number: 5 (lower is better)
Translates to: LGKCVKWSVCGVARLTIPEMVNP*YRHSMP
Trigger: AGGCATGCTGTGTCTGTACAATGGATTGACCATCTC...AGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCTGGGAGCATTCTGGATaGATTCCAAAGAGCAACAGG +
Preference number: 5 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSWEHSG*IPKSNR
Trigger: CCTGTTGCTCTTTGGAATCAATCCAGAATGCTCCCA...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp GAATATCAAGGCAAGAAAGGAGTTTCCTTCTTGGATGACTACGTGGGCGCAAGAGTGAATCACATGAGGTaGAGCTTGCTAAGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: EYQGKKGVSFLDDYVGARVNHMR*SLLSLS
Trigger: GGAAAGACTTAGCAAGCTCAACCTCATGTGATTCAC...TCTTGCGCCCACGTAGTCATCCAAGAAGGAAACTCCTTTCTTGCCTTGATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CCTAGCTCCTGTCTCTGGTTTCACACCATGAAAAGAACACCTCAGAAGAAAGCGGCTGTCTCGGGATATTaGTCAAAACACATTTGGTCA +
Preference number: 5 (lower is better)
Translates to: PSSCLWFHTMKRTPQKKAAVSGY*SKHIWS
Trigger: TGACCAAATGTGTTTTGACAAATATCCCGAGACAGC...CGCTTTCTTCTGAGGTGTTCTTTTCATGGTGTGAAACCAGAGACAGGAGCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS GCA 90 bp AATTCTGTCCATCAGCAGAGCAGACACAATGTTCCCTGGCAATACTaGCAATGTCCCCAGAAAGTTGACAAAATAAATCCAGTAGGCACT +
Preference number: 5 (lower is better)
Translates to: NSVHQQSRHNVPWQY*QCPQKVDKINPVGT
Trigger: AGTGCCTACTGGATTTATTTTGTCAACTTTCTGGGGACATTGGCAGTATTGCCAGGGAACATTGTGTCTGCTCTGCTGATGGACAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CCA 90 bp TCACCTTCTTTACTGTTTGTTTCTTCACCTCTCTGGCAATGTCCTTaGCACCCTTCATCAGTGAAGTCCTATCCTTGTAAGAGTCTTCCA +
Preference number: 5 (lower is better)
Translates to: SPSLLFVSSPLWQCP*HPSSVKSYPCKSLP
Trigger: TGGAAGACTCTTACAAGGATAGGACTTCACTGATGAAGGGTGCCAAGGACATTGCCAGAGAGGTGAAGAAACAAACAGTAAAGAAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS-3UTR CAA 90 bp AAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTAGTTCTCTGGCAATGTCCTaGGCACCCTTCATCAGTGAA +
Preference number: 5 (lower is better)
Translates to: KCVKWSVCGVARLTIPPSSLAMS*APFISE
Trigger: TTCACTGATGAAGGGTGCCAAGGACATTGCCAGAGA...ACTAGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTCACCTTCTTTACTGTTaGTTTCTTCACCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPHLLYC*FLHLSG
Trigger: GCCAGAGAGGTGAAGAAACAAACAGTAAAGAAGGTG...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATCACCTTCTTTACTGTTaGTTTCTTCACCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHHLLYC*FLHLSG
Trigger: GCCAGAGAGGTGAAGAAACAAACAGTAAAGAAGGTG...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCAAGGCAAAGAATCCGTaGACAGACATGCAAATCAGA +
Preference number: 5 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSKAKNP*TDMQIR
Trigger: TCTGATTTGCATGTCTGTCAACGGATTCTTTGCCTT...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp GGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCCCTATGAATCTGCCATaGTCGTATTCCATTCCAGTA +
Preference number: 5 (lower is better)
Translates to: GQVCKVVCLWSCKVNYTSPMNLP*SYSIPV
Trigger: TACTGGAATGGAATACGACAATGGCAGATTCATAGG...GGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAAGCTTGTAAAAATGAGTaGAGGCCGCCAGTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: CTGSYSESIQMQKETLCEACKNE*RPPVAH
Trigger: GTGAGCCACTGGCGGCCTCAACTCATTTTTACAAGC...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CTGTTTCTTAATCTCCAGCTAAATCTGGAGCAAGCTATACAGGCCACACCACATTGTGTCCTAATCTCTTaGCTGGAACCTTATCAGTGG +
Preference number: 5 (lower is better)
Translates to: LFLNLQLNLEQAIQATPHCVLIS*LEPYQW
Trigger: CCACTGATAAGGTTCCAGCAAAGAGATTAGGACACA...ATGTGGTGTGGCCTGTATAGCTTGCTCCAGATTTAGCTGGAGATTAAGAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCCTGATTTGCATGGCTTaGTTGCTTTCCATGGCTTTG +
Preference number: 5 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSLICMA*LLSMAL
Trigger: CAAAGCCATGGAAAGCAACAAAGCCATGCAAATCAG...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS TCA 90 bp CCTATCCTTGTAAGAGTCTTCCATCTTATCTCAACTGATGGCCAATaGGAAGATGGGAAATTTTCACAGCCTCCTTTCAGTGGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: PILVRVFHLISTDGQ*EDGKFSQPPFSGSA
Trigger: AGCTGAACCACTGAAAGGAGGCTGTGAAAATTTCCCATCTTCTCATTGGCCATCAGTTGAGATAAGATGGAAGACTCTTACAAGGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS-3UTR CAA 90 bp AAGAGACAAAGTCTTTATTCCCATGAAATGGACATCCTAGTGGAGGGACACAGAACCATGACCGCATTCTaGGATTATCAGCTCATACTG +
Preference number: 5 (lower is better)
Translates to: KRQSLYSHEMDILVEGHRTMTAF*DYQLIL
Trigger: CAGTATGAGCTGATAATCCAAGAATGCGGTCATGGT...TCTGTGTCCCTCCACTAGGATGTCCATTTCATGGGAATAAAGACTTTGTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp CTGGGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTGTTACAGATTTGAACTaGACCCCTATGAATCTGCCA +
Preference number: 5 (lower is better)
Translates to: LGKCVKWSVCGVARLTIPVTDLN*TPMNLP
Trigger: TGGCAGATTCATAGGGGTCAAGTTCAAATCTGTAAC...AGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS TCA 90 bp TCAGTGAAGTCCTATCCTTGTAAGAGTCTTCCATCTTATCTCAACTaGTGGCCAATGAGAAGATGGGAAATTTTCACAGCCTCCTTTCAG +
Preference number: 5 (lower is better)
Translates to: SVKSYPCKSLPSYLN*WPMRRWEIFTASFQ
Trigger: CTGAAAGGAGGCTGTGAAAATTTCCCATCTTCTCATTGGCCATCAGTTGAGATAAGATGGAAGACTCTTACAAGGATAGGACTTCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS TCA 90 bp AGCCATAACCTTGGACAAATGAAGAAAGGAAGGCAAAGAATCCGTTaGCAGACATGCAAATCAGAAGAGACTGTTTCCTTCCCACTTTGT +
Preference number: 5 (lower is better)
Translates to: SHNLGQMKKGRQRIR*QTCKSEETVSFPLC
Trigger: ACAAAGTGGGAAGGAAACAGTCTCTTCTGATTTGCATGTCTGTCAACGGATTCTTTGCCTTCCTTTCTTCATTTGTCCAAGGTTATGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS-3UTR CAA 90 bp AAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTAGTATCATCTTCTTCATCTaGGAACCGACTGTAGGACCT +
Preference number: 5 (lower is better)
Translates to: KCVKWSVCGVARLTIPPSIIFFI*EPTVGP
Trigger: AGGTCCTACAGTCGGTTCCAAGATGAAGAAGATGAT...ACTAGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAAATCCAGATCCTGAATTaGGGATGCAGAGGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: CTGSYSESIQMQKETLCEIQILN*GCRGLS
Trigger: AGACAGACCTCTGCATCCCAAATTCAGGATCTGGAT...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACATTTGCATGGCTTTGTaGCTTTCCATGGCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYICMAL*LSMALL
Trigger: CAACAAAGCCATGGAAAGCAACAAAGCCATGCAAAT...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp TTTTCCCACCTCCCCTTTGATCTCTTAAGGTATCTTGAAAGACAACTAAGCAGTCCTATGAATCTGCCATaGTCGTATTCCATTCCAGTA +
Preference number: 5 (lower is better)
Translates to: FSHLPFDLLRYLERQLSSPMNLP*SYSIPV
Trigger: TACTGGAATGGAATACGACAATGGCAGATTCATAGG...ACTGCTTAGTTGTCTTTCAAGATACCTTAAGAGATCAAAGGGGAGGTGGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp GGCAAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTGGCTCAAAATCTGTGTaGTCAAAAACAGTGTCAATA +
Preference number: 5 (lower is better)
Translates to: GKCVKWSVCGVARLTIPPGSKSV*SKTVSI
Trigger: TATTGACACTGTTTTTGACAACACAGATTTTGAGCC...AGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp ATTTTGTGCACGGGGAAAGTGAGAACTAGAGATGTTCAACGACTTACAGTCTCCGGCTCAAAATCTGTGTaGTCAAAAACAGTGTCAATA +
Preference number: 5 (lower is better)
Translates to: ILCTGKVRTRDVQRLTVSGSKSV*SKTVSI
Trigger: TATTGACACTGTTTTTGACAACACAGATTTTGAGCC...GGAGACTGTAAGTCGTTGAACATCTCTAGTTCTCACTTTCCCCGTGCACAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp TGTACTGGGTCCTATTCTGAGTCAATACAAATGCAGAAAGAAACCCTTTGTGAAAAGGCAAAGAATCCGTaGACAGACATGCAAATCAGA +
Preference number: 5 (lower is better)
Translates to: CTGSYSESIQMQKETLCEKAKNP*TDMQIR
Trigger: TCTGATTTGCATGTCTGTCAACGGATTCTTTGCCTT...TTCACAAAGGGTTTCTTTCTGCATTTGTATTGACTCAGAATAGGACCCAGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp AAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTAGTCTTGGTTACTTCACTTaGTGGGATATTTCTACAAGG +
Preference number: 5 (lower is better)
Translates to: KCVKWSVCGVARLTIPPSLGYFT*WDISTR
Trigger: CCTTGTAGAAATATCCCACAAAGTGAAGTAACCAAG...ACTAGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp CACACAGCAGTGTCTCAATACGTATCACATGGGAGGTGCTCAATAAGTATTTACCATATTCTATCTATTTaGATTGGCAGAGGGAATCAG +
Preference number: 5 (lower is better)
Translates to: HTAVSQYVSHGRCSISIYHILSI*IGRGNQ
Trigger: CTGATTCCCTCTGCCAATCAAAATAGATAGAATATG...GTAAATACTTATTGAGCACCTCCCATGTGATACGTATTGAGACACTGCTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS-3UTR CAA 90 bp AAGTGTGTAAAGTGGTCTGTTTGTGGAGTTGCAAGGTTAACTATACCTCCTAGTAGGAGAGCTATAAAATaGTTCACACTTGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: KCVKWSVCGVARLTIPPSRRAIK*FTLVDL
Trigger: CAAGTCAACAAGTGTGAACAATTTTATAGCTCTCCT...ACTAGGAGGTATAGTTAACCTTGCAACTCCACAAACAGACCACTTTACACACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322285.7
CDS-3UTR CAA 90 bp CATGGTATAAATACCACCACTATAGCTGATCTCAAACTACAAAAATACTGTCACATACAGGGTACTTTCTaGGGTTGTTTGACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: HGINTTTIADLKLQKYCHIQGTF*GCLTAV
Trigger: GACAGCAGTCAAACAACCCAAGAAAGTACCCTGTAT...GTGACAGTATTTTTGTAGTTTGAGATCAGCTATAGTGGTGGTATTTATACCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS GCA 72 bp TCAGTGCGGGCGCCGCTCCGGCTCGCTTCCCCGGGCTaGCTCCGTCTGCCACTCTCGCCTGCAGCGCGCGGA +
Preference number: 6 (lower is better)
Translates to: SVRAPLRLASPG*LRLPLSPAARG
Trigger: TCCGCGCGCTGCAGGCGAGAGTGGCAGACGGAGGCAGCCCGGGGAAGCGAGCCGGAGCGGCGCCCGCACTGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS GCA 72 bp GCCGTCGGACACCCTTGCCCTGAGTGGTGTCAGCACTaGAGCCGCCTCAGTGCGGGCGCCGCTCCGGCTCGC +
Preference number: 6 (lower is better)
Translates to: AVGHPCPEWCQH*SRLSAGAAPAR
Trigger: GCGAGCCGGAGCGGCGCCCGCACTGAGGCGGCTGCAGTGCTGACACCACTCAGGGCAAGGGTGTCCGACGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CAA 72 bp GATTCCAGCTCCCGCCGGTCCTTGTACTCATCGCCCTaGGGCTGCCCCACTGACACGATGCTGTCCTTCGCT +
Preference number: 6 (lower is better)
Translates to: DSSSRRSLYSSP*GCPTDTMLSFA
Trigger: AGCGAAGGACAGCATCGTGTCAGTGGGGCAGCCCAAGGGCGATGAGTACAAGGACCGGCGGGAGCTGGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS GCA 72 bp GGTTCAAAACAGAACGCTCCAGCCGTCGGACACCCTTaGCCTGAGTGGTGTCAGCACTGCAGCCGCCTCAGT +
Preference number: 6 (lower is better)
Translates to: GSKQNAPAVGHP*PEWCQHCSRLS
Trigger: ACTGAGGCGGCTGCAGTGCTGACACCACTCAGGGCAAGGGTGTCCGACGGCTGGAGCGTTCTGTTTTGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CCA 72 bp ATTCCAGCTCCCGCCGGTCCTTGTACTCATCGCCCTTaGGCTGCCCCACTGACACGATGCTGTCCTTCGCTT +
Preference number: 6 (lower is better)
Translates to: IPAPAGPCTHRP*AAPLTRCCPSL
Trigger: AAGCGAAGGACAGCATCGTGTCAGTGGGGCAGCCCAAGGGCGATGAGTACAAGGACCGGCGGGAGCTGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CAA 72 bp TCAGCTCTCCTTTCTGATTCCAGCTCCCGCCGGTCCTaGTACTCATCGCCCTTGGGCTGCCCCACTGACACG +
Preference number: 6 (lower is better)
Translates to: SALLSDSSSRRS*YSSPLGCPTDT
Trigger: CGTGTCAGTGGGGCAGCCCAAGGGCGATGAGTACAAGGACCGGCGGGAGCTGGAATCAGAAAGGAGAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CAA 90 bp TCTTCCTCGTCAGCTCTCCTTTCTGATTCCAGCTCCCGCCGGTCCTaGTACTCATCGCCCTTGGGCTGCCCCACTGACACGATGCTGTCC +
Preference number: 6 (lower is better)
Translates to: SSSSALLSDSSSRRS*YSSPLGCPTDTMLS
Trigger: GGACAGCATCGTGTCAGTGGGGCAGCCCAAGGGCGATGAGTACAAGGACCGGCGGGAGCTGGAATCAGAAAGGAGAGCTGACGAGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CAA 90 bp CTCCTTTCTGATTCCAGCTCCCGCCGGTCCTTGTACTCATCGCCCTaGGGCTGCCCCACTGACACGATGCTGTCCTTCGCTTGGTTCATA +
Preference number: 6 (lower is better)
Translates to: LLSDSSSRRSLYSSP*GCPTDTMLSFAWFI
Trigger: TATGAACCAAGCGAAGGACAGCATCGTGTCAGTGGGGCAGCCCAAGGGCGATGAGTACAAGGACCGGCGGGAGCTGGAATCAGAAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS GCA 72 bp TGTACTCATCGCCCTTGGGCTGCCCCACTGACACGATaGTGTCCTTCGCTTGGTTCATACTGGGGATGCCCT +
Preference number: 6 (lower is better)
Translates to: CTHRPWAAPLTR*CPSLGSYWGCP
Trigger: AGGGCATCCCCAGTATGAACCAAGCGAAGGACAGCATCGTGTCAGTGGGGCAGCCCAAGGGCGATGAGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CCA 72 bp GCCCCTCAGTGGCTTCACTTGAGCCTTCGTCATCGTTaGCCTCACCATTATAGGTTTCTCCAGCCGGGTAGT +
Preference number: 6 (lower is better)
Translates to: APQWLHLSLRHR*PHHYRFLQPGS
Trigger: ACTACCCGGCTGGAGAAACCTATAATGGTGAGGCCAACGATGACGAAGGCTCAAGTGAAGCCACTGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CCA 72 bp CCCGGGCCAGGACTTCAGCAAAGTACGAGAACACAGTaGGTATGGCTCCTCCAATCCCGAATCCAGAAAGTA +
Preference number: 6 (lower is better)
Translates to: PGPGLQQSTRTQ*VWLLQSRIQKV
Trigger: TACTTTCTGGATTCGGGATTGGAGGAGCCATACCCACTGTGTTCTCGTACTTTGCTGAAGTCCTGGCCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS GCA 72 bp CTATGCTGCCTAGCCATCCAGATCCTGAATTTGGGATaGAGAGGTCTGTCTCAGCACTGGGTAACACGAAGC +
Preference number: 6 (lower is better)
Translates to: LCCLAIQILNLG*RGLSQHWVTRS
Trigger: GCTTCGTGTTACCCAGTGCTGAGACAGACCTCTGCATCCCAAATTCAGGATCTGGATGGCTAGGCAGCATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS TCA 72 bp CAGTTCCACAGTGACCACGTCAAGAGAGTTCCAGGCTaGGATGGTCAATCCATTGTACAGACACAGCATGCC +
Preference number: 6 (lower is better)
Translates to: QFHSDHVKRVPG*DGQSIVQTQHA
Trigger: GGCATGCTGTGTCTGTACAATGGATTGACCATCTCAGCCTGGAACTCTCTTGACGTGGTCACTGTGGAACTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CCA 72 bp CCAGGACTTCAGCAAAGTACGAGAACACAGTGGGTATaGCTCCTCCAATCCCGAATCCAGAAAGTAAGCGAC +
Preference number: 6 (lower is better)
Translates to: PGLQQSTRTQWV*LLQSRIQKVSD
Trigger: GTCGCTTACTTTCTGGATTCGGGATTGGAGGAGCCATACCCACTGTGTTCTCGTACTTTGCTGAAGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CAA 72 bp GGTACACTATGCTGCCTAGCCATCCAGATCCTGAATTaGGGATGCAGAGGTCTGTCTCAGCACTGGGTAACA +
Preference number: 6 (lower is better)
Translates to: GTLCCLAIQILN*GCRGLSQHWVT
Trigger: TGTTACCCAGTGCTGAGACAGACCTCTGCATCCCAAATTCAGGATCTGGATGGCTAGGCAGCATAGTGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CAA 90 bp ACAGTGACCACGTCAAGAGAGTTCCAGGCTGAGATGGTCAATCCATaGTACAGACACAGCATGCCTATCATCATGGATTCACTGGTGCCG +
Preference number: 6 (lower is better)
Translates to: TVTTSREFQAEMVNP*YRHSMPIIMDSLVP
Trigger: CGGCACCAGTGAATCCATGATGATAGGCATGCTGTGTCTGTACAATGGATTGACCATCTCAGCCTGGAACTCTCTTGACGTGGTCACTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CCA 72 bp ATCCTGAATTTGGGATGCAGAGGTCTGTCTCAGCACTaGGTAACACGAAGCCAACGACAAACACCTCTACAC +
Preference number: 6 (lower is better)
Translates to: ILNLGCRGLSQH*VTRSQRQTPLH
Trigger: GTGTAGAGGTGTTTGTCGTTGGCTTCGTGTTACCCAGTGCTGAGACAGACCTCTGCATCCCAAATTCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CCA 72 bp AGCTTCATCATGTTTTCCAACCTCCAACAAGAATCGTaGGCTTTCAGGCATGAATGTGAGGGCCACCACGGA +
Preference number: 6 (lower is better)
Translates to: SFIMFSNLQQES*AFRHECEGHHG
Trigger: TCCGTGGTGGCCCTCACATTCATGCCTGAAAGCCCACGATTCTTGTTGGAGGTTGGAAAACATGATGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CAA 72 bp GGCTCGGTCCACAGCTTGATTCACCTTCTTTACTGTTaGTTTCTTCACCTCTCTGGCAATGTCCTTGGCACC +
Preference number: 6 (lower is better)
Translates to: GSVHSLIHLLYC*FLHLSGNVLGT
Trigger: GGTGCCAAGGACATTGCCAGAGAGGTGAAGAAACAAACAGTAAAGAAGGTGAATCAAGCTGTGGACCGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CAA 72 bp TCTCATCATCTTCATCATGCCCCTCAGTGGCTTCACTaGAGCCTTCGTCATCGTTGGCCTCACCATTATAGG +
Preference number: 6 (lower is better)
Translates to: SHHLHHAPQWLH*SLRHRWPHHYR
Trigger: CCTATAATGGTGAGGCCAACGATGACGAAGGCTCAAGTGAAGCCACTGAGGGGCATGATGAAGATGATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CAA 90 bp TTCATCCTGGGCTCGGTCCACAGCTTGATTCACCTTCTTTACTGTTaGTTTCTTCACCTCTCTGGCAATGTCCTTGGCACCCTTCATCAG +
Preference number: 6 (lower is better)
Translates to: FILGSVHSLIHLLYC*FLHLSGNVLGTLHQ
Trigger: CTGATGAAGGGTGCCAAGGACATTGCCAGAGAGGTGAAGAAACAAACAGTAAAGAAGGTGAATCAAGCTGTGGACCGAGCCCAGGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CAA 90 bp ACTGTAGGACCTCTGGGTGTATTCATCCTGGGCTCGGTCCACAGCTaGATTCACCTTCTTTACTGTTTGTTTCTTCACCTCTCTGGCAAT +
Preference number: 6 (lower is better)
Translates to: TVGPLGVFILGSVHS*IHLLYCLFLHLSGN
Trigger: ATTGCCAGAGAGGTGAAGAAACAAACAGTAAAGAAGGTGAATCAAGCTGTGGACCGAGCCCAGGATGAATACACCCAGAGGTCCTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CCA 72 bp ATGAGAAGATGGGAAATTTTCACAGCCTCCTTTCAGTaGTTCAGCTCTGACAGCATCATCCACTTTGGGTTC +
Preference number: 6 (lower is better)
Translates to: MRRWEIFTASFQ*FSSDSIIHFGF
Trigger: GAACCCAAAGTGGATGATGCTGTCAGAGCTGAACCACTGAAAGGAGGCTGTGAAAATTTCCCATCTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CCA 72 bp AATTCTGTCCATCAGCAGAGCAGACACAATGTTCCCTaGCAATACTGCCAATGTCCCCAGAAAGTTGACAAA +
Preference number: 6 (lower is better)
Translates to: NSVHQQSRHNVP*QYCQCPQKVDK
Trigger: TTTGTCAACTTTCTGGGGACATTGGCAGTATTGCCAGGGAACATTGTGTCTGCTCTGCTGATGGACAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CCA 72 bp TCAATCCATTGTACAGACACAGCATGCCTATCATCATaGATTCACTGGTGCCGAACCAAAGGAAGAAACAGC +
Preference number: 6 (lower is better)
Translates to: SIHCTDTACLSS*IHWCRTKGRNS
Trigger: GCTGTTTCTTCCTTTGGTTCGGCACCAGTGAATCCATGATGATAGGCATGCTGTGTCTGTACAATGGATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CAA 72 bp ACGAGCACAGTAGAAGCCAGCAGGATGGGGATTGATTaGGTGATGCTGACCAGAGAGCCAAATATTAAGTTT +
Preference number: 6 (lower is better)
Translates to: TSTVEASRMGID*VMLTREPNIKF
Trigger: AAACTTAATATTTGGCTCTCTGGTCAGCATCACCAAATCAATCCCCATCCTGCTGGCTTCTACTGTGCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502798.7
CDS GCA 72 bp CATCAGCAGAGCAGACACAATGTTCCCTGGCAATACTaGCAATGTCCCCAGAAAGTTGACAAAATAAATCCA +
Preference number: 6 (lower is better)
Translates to: HQQSRHNVPWQY*QCPQKVDKINP
Trigger: TGGATTTATTTTGTCAACTTTCTGGGGACATTGGCAGTATTGCCAGGGAACATTGTGTCTGCTCTGCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS TCA 72 bp TCCTATCCTTGTAAGAGTCTTCCATCTTATCTCAACTaGTGGCCAATGAGAAGATGGGAAATTTTCACAGCC +
Preference number: 6 (lower is better)
Translates to: SYPCKSLPSYLN*WPMRRWEIFTA
Trigger: GGCTGTGAAAATTTCCCATCTTCTCATTGGCCATCAGTTGAGATAAGATGGAAGACTCTTACAAGGATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS CAA 90 bp TCAAAGGTGCAGGACTTAAAAACAGAGTCTTTGAAAGTTACAGATTaGAACTTGACCCCTATGAATCTGCCATTGTCGTATTCCATTCCA +
Preference number: 6 (lower is better)
Translates to: SKVQDLKTESLKVTD*NLTPMNLPLSYSIP
Trigger: TGGAATGGAATACGACAATGGCAGATTCATAGGGGTCAAGTTCAAATCTGTAACTTTCAAAGACTCTGTTTTTAAGTCCTGCACCTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7
CDS TCA 72 bp GTCAATAAATGTGCAGTTCTTGAAGTAGGTGTTCACTaGAGTTACATCCTCAAAGGTGCAGGACTTAAAAAC +
Preference number: 6 (lower is better)
Translates to: VNKCAVLEVGVH*SYILKGAGLKN
Trigger: GTTTTTAAGTCCTGCACCTTTGAGGATGTAACTTCAGTGAACACCTACTTCAAGAACTGCACATTTATTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322285.7
ENST00000502798.7