Pregenerated sensors for SUV39H2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272853Ensembl transcript IDs: ENST00000609399.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGGAATCCCGGCGACTGCCCCAAGCCAGCGGAACCTCTCCAGCCATaGCCACGTGCAGCCGCTTCCGAAGCCCGGAGCTCTAGAGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: RNPGDCPKPAEPLQP*PRAAASEARSSRGS Trigger: GCTCCCTCTAGAGCTCCGGGCTTCGGAAGCGGCTGCACGTGGGCATGGCTGGAGAGGTTCCGCTGGCTTGGGGCAGTCGCCGGGATTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS CCA 90 bp | AAAGTCCTGGCCGACGTCTTCCCGAGTGAAGGCGCCAAACGGGCCTaGCGAAGGGAAGGGGGCGCCGGACACTGCCGAGGATCCGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: KVLADVFPSEGAKRA*RREGGAGHCRGSGS Trigger: GCTCCCGGATCCTCGGCAGTGTCCGGCGCCCCCTTCCCTTCGCCAGGCCCGTTTGGCGCCTTCACTCGGGAAGACGTCGGCCAGGACTTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS GCA 90 bp | GAACCGTACCCGACAGGCAGCGTCCCCGGCTCCCTAGGTCCCCGCTaGCCGTGTCGGATCTCGCAGTGTGCGAGTGCTGCCGAAGTAAGA | + |
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Preference number: 5 (lower is better) Translates to: EPYPTGSVPGSLGPR*PCRISQCASAAEVR Trigger: TCTTACTTCGGCAGCACTCGCACACTGCGAGATCCGACACGGGCAGCGGGGACCTAGGGAGCCGGGGACGCTGCCTGTCGGGTACGGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS GCA 90 bp | CCCCGGCTCCCTAGGTCCCCGCTGCCCGTGTCGGATCTCGCAGTGTaGGAGTGCTGCCGAAGTAAGACGTCTCCAAAGCGCAAAGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: PRLPRSPLPVSDLAV*ECCRSKTSPKRKVL Trigger: CAGGACTTTGCGCTTTGGAGACGTCTTACTTCGGCAGCACTCGCACACTGCGAGATCCGACACGGGCAGCGGGGACCTAGGGAGCCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS GCA 90 bp | CCTAGGTCCCCGCTGCCCGTGTCGGATCTCGCAGTGTGCGAGTGCTaGCGAAGTAAGACGTCTCCAAAGCGCAAAGTCCTGGCCGACGTC | + |
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Preference number: 5 (lower is better) Translates to: PRSPLPVSDLAVCEC*RSKTSPKRKVLADV Trigger: GACGTCGGCCAGGACTTTGCGCTTTGGAGACGTCTTACTTCGGCAGCACTCGCACACTGCGAGATCCGACACGGGCAGCGGGGACCTAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS GCA 90 bp | CTCCCTAGGTCCCCGCTGCCCGTGTCGGATCTCGCAGTGTGCGAGTaGTGCCGAAGTAAGACGTCTCCAAAGCGCAAAGTCCTGGCCGAC | + |
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Preference number: 5 (lower is better) Translates to: LPRSPLPVSDLAVCE*CRSKTSPKRKVLAD Trigger: GTCGGCCAGGACTTTGCGCTTTGGAGACGTCTTACTTCGGCAGCACTCGCACACTGCGAGATCCGACACGGGCAGCGGGGACCTAGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS CCA 90 bp | GACCGGTGGTTTCCGCTGTGCCGCACATTAGGATCAGCTGGGAGCTaGATAGCACAGGCCACACCCCACACCAACCAGTCGGAATCCCGG | + |
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Preference number: 5 (lower is better) Translates to: DRWFPLCRTLGSAGS*IAQATPHTNQSESR Trigger: CCGGGATTCCGACTGGTTGGTGTGGGGTGTGGCCTGTGCTATCCAGCTCCCAGCTGATCCTAATGTGCGGCACAGCGGAAACCACCGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS CCA 90 bp | TGTGCGAGTGCTGCCGAAGTAAGACGTCTCCAAAGCGCAAAGTCCTaGCCGACGTCTTCCCGAGTGAAGGCGCCAAACGGGCCTGGCGAA | + |
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Preference number: 5 (lower is better) Translates to: CASAAEVRRLQSAKS*PTSSRVKAPNGPGE Trigger: TTCGCCAGGCCCGTTTGGCGCCTTCACTCGGGAAGACGTCGGCCAGGACTTTGCGCTTTGGAGACGTCTTACTTCGGCAGCACTCGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS CCA 72 bp | GCCGACGTCTTCCCGAGTGAAGGCGCCAAACGGGCCTaGCGAAGGGAAGGGGGCGCCGGACACTGCCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: ADVFPSEGAKRA*RREGGAGHCRG Trigger: TCCTCGGCAGTGTCCGGCGCCCCCTTCCCTTCGCCAGGCCCGTTTGGCGCCTTCACTCGGGAAGACGTCGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS GCA 72 bp | GGCGACTGCCCCAAGCCAGCGGAACCTCTCCAGCCATaGCCACGTGCAGCCGCTTCCGAAGCCCGGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GDCPKPAEPLQP*PRAAASEARSS Trigger: AGAGCTCCGGGCTTCGGAAGCGGCTGCACGTGGGCATGGCTGGAGAGGTTCCGCTGGCTTGGGGCAGTCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS TCA 72 bp | TCCAAAGCGCAAAGTCCTGGCCGACGTCTTCCCGAGTaGAGGCGCCAAACGGGCCTGGCGAAGGGAAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: SKAQSPGRRLPE*RRQTGLAKGRG Trigger: CCCCCTTCCCTTCGCCAGGCCCGTTTGGCGCCTTCACTCGGGAAGACGTCGGCCAGGACTTTGCGCTTTGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS CCA 72 bp | CGCCACCAGGCCGAGCTCAGGAGCTTGGCAACAACATaGGAGGGGAGCTCGGGTCCCCTTACAGACCTACCC | + |
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Preference number: 6 (lower is better) Translates to: RHQAELRSLATT*EGSSGPLTDLP Trigger: GGGTAGGTCTGTAAGGGGACCCGAGCTCCCCTCCCATGTTGTTGCCAAGCTCCTGAGCTCGGCCTGGTGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS GCA 72 bp | CCTAGGTCCCCGCTGCCCGTGTCGGATCTCGCAGTGTaGGAGTGCTGCCGAAGTAAGACGTCTCCAAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: PRSPLPVSDLAV*ECCRSKTSPKR Trigger: GCGCTTTGGAGACGTCTTACTTCGGCAGCACTCGCACACTGCGAGATCCGACACGGGCAGCGGGGACCTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS GCA 72 bp | CCGCTGCCCGTGTCGGATCTCGCAGTGTGCGAGTGCTaGCGAAGTAAGACGTCTCCAAAGCGCAAAGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PLPVSDLAVCEC*RSKTSPKRKVL Trigger: CAGGACTTTGCGCTTTGGAGACGTCTTACTTCGGCAGCACTCGCACACTGCGAGATCCGACACGGGCAGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS GCA 72 bp | TCCCCGCTGCCCGTGTCGGATCTCGCAGTGTGCGAGTaGTGCCGAAGTAAGACGTCTCCAAAGCGCAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: SPLPVSDLAVCE*CRSKTSPKRKV Trigger: GACTTTGCGCTTTGGAGACGTCTTACTTCGGCAGCACTCGCACACTGCGAGATCCGACACGGGCAGCGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS CCA 72 bp | GCTGCCGAAGTAAGACGTCTCCAAAGCGCAAAGTCCTaGCCGACGTCTTCCCGAGTGAAGGCGCCAAACGGG | + |
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Preference number: 6 (lower is better) Translates to: AAEVRRLQSAKS*PTSSRVKAPNG Trigger: CCCGTTTGGCGCCTTCACTCGGGAAGACGTCGGCCAGGACTTTGCGCTTTGGAGACGTCTTACTTCGGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS CCA 72 bp | CCGGTGGTTTCCGCTGTGCCGCACATTAGGATCAGCTaGGAGCTGGATAGCACAGGCCACACCCCACACCAA | + |
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Preference number: 6 (lower is better) Translates to: PVVSAVPHIRIS*ELDSTGHTPHQ Trigger: TTGGTGTGGGGTGTGGCCTGTGCTATCCAGCTCCCAGCTGATCCTAATGTGCGGCACAGCGGAAACCACCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS CCA 72 bp | TTTCCGCTGTGCCGCACATTAGGATCAGCTGGGAGCTaGATAGCACAGGCCACACCCCACACCAACCAGTCG | + |
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Preference number: 6 (lower is better) Translates to: FPLCRTLGSAGS*IAQATPHTNQS Trigger: CGACTGGTTGGTGTGGGGTGTGGCCTGTGCTATCCAGCTCCCAGCTGATCCTAATGTGCGGCACAGCGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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| CDS GCA 72 bp | GTGAGAAGCACTGATGTGGACCGGTGGTTTCCGCTGTaGCGCACATTAGGATCAGCTGGGAGCTGGATAGCA | + |
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Preference number: 6 (lower is better) Translates to: VRSTDVDRWFPL*RTLGSAGSWIA Trigger: TGCTATCCAGCTCCCAGCTGATCCTAATGTGCGGCACAGCGGAAACCACCGGTCCACATCAGTGCTTCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609399.1 |
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