RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SUV39H1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101945

Ensembl transcript IDs: ENST00000337852.10, ENST00000376687.4, ENST00000462786.1, ENST00000482260.1

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCCTAGCAACCGCAGAGCTCCCAAGAGCCCTAGGTACCTTCACTaGACTGTGAAGGCAGAGCTTGGTCCCAGCCTACCTCCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: APSNRRAPKSPRYLH*TVKAELGPSLPPGL
Trigger: CAGCCCTGGAGGTAGGCTGGGACCAAGCTCTGCCTTCACAGTGCAGTGAAGGTACCTAGGGCTCTTGGGAGCTCTGCGGTTGCTAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR TCA 90 bp TGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCAAGGCTTCCCTaGGACAATCCACGTGGACCAGGTGCTCTACCCAGTGCCTGGCAC +
Preference number: 1 (lower is better)
Translates to: WALSWHPPPWFSRLP*DNPRGPGALPSAWH
Trigger: GTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGAAGCCTTGAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR CCA 90 bp GCATCCACCTCCGTGGTTTTCAAGGCTTCCCTGAGACAATCCACGTaGACCAGGTGCTCTACCCAGTGCCTGGCACCTCATCACCACCCC +
Preference number: 1 (lower is better)
Translates to: ASTSVVFKASLRQST*TRCSTQCLAPHHHP
Trigger: GGGGTGGTGATGAGGTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGAAGCCTTGAAAACCACGGAGGTGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR TCA 90 bp GACTATCTAGATCTTGGTTCCAGCTCTGAGTGGTGTCAGCGGTCATaGCACCCCAGGTCAGGGCCCCTAGCAACCGCAGAGCTCCCAAGA +
Preference number: 1 (lower is better)
Translates to: DYLDLGSSSEWCQRS*HPRSGPLATAELPR
Trigger: TCTTGGGAGCTCTGCGGTTGCTAGGGGCCCTGACCTGGGGTGTCATGACCGCTGACACCACTCAGAGCTGGAACCAAGATCTAGATAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR TCA 90 bp CCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTaGAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCAGCAC +
Preference number: 1 (lower is better)
Translates to: PFQWHVGIHFSDMQP*RRDPTALRANTTQH
Trigger: GTGCTGGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR CCA 90 bp ACTGCTCAGTGGCCCATGGACACCCACTTCCCTTCCAGTGGCATGTaGGCATCCACTTCTCAGATATGCAGCCCTGAAGAAGAGACCCTA +
Preference number: 1 (lower is better)
Translates to: TAQWPMDTHFPSSGM*ASTSQICSPEEETL
Trigger: TAGGGTCTCTTCTTCAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGGTGTCCATGGGCCACTGAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR GCA 90 bp ACCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATaGAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTA +
Preference number: 1 (lower is better)
Translates to: THFPSSGMWASTSQI*SPEEETLQLLGPTL
Trigger: TAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp TGGGAATGGCAGGCAGCAAGGGCTTCCCTCTCGCCTCGTCATCCCATAGTGGGGATTCTGGGGCTGGGTTaGGACTCACCCCTTGGACCT +
Preference number: 2 (lower is better)
Translates to: WEWQAARASLSPRHPIVGILGLG*DSPLGP
Trigger: AGGTCCAAGGGGTGAGTCCCAACCCAGCCCCAGAAT...CCCCACTATGGGATGACGAGGCGAGAGGGAAGCCCTTGCTGCCTGCCATTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp TGGGAATGGCAGGCAGCAAGGGCTTCCCTCTCGCCTCGTCATCCCATAGTGGGGCTGCTCAGTGGCCCATaGACACCCACTTCCCTTCCA +
Preference number: 2 (lower is better)
Translates to: WEWQAARASLSPRHPIVGLLSGP*TPTSLP
Trigger: TGGAAGGGAAGTGGGTGTCCATGGGCCACTGAGCAG...CCCCACTATGGGATGACGAGGCGAGAGGGAAGCCCTTGCTGCCTGCCATTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR GCA 90 bp GTACCTTCACTGCACTGTGAAGGCAGAGCTTGGTCCCAGCCTACCTCCAGGGCTCTGGCCTCTGATGTCTaGCTGCTCTGGGGTTGCTTC +
Preference number: 2 (lower is better)
Translates to: VPSLHCEGRAWSQPTSRALASDV*LLWGCF
Trigger: GAAGCAACCCCAGAGCAGGCAGACATCAGAGGCCAG...AGCCCTGGAGGTAGGCTGGGACCAAGCTCTGCCTTCACAGTGCAGTGAAGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp CTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCAAGCCTACCTCCAGGGCTaGCCAGCTCTGCACTGCCTT +
Preference number: 2 (lower is better)
Translates to: LCLLPHGPFPGIHLRGFQAYLQG*PALHCL
Trigger: AAGGCAGTGCAGAGCTGGCCAGCCCTGGAGGTAGGC...TTGAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR GCA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGTGCCTGCTCTGGGGTTaGTTCCCCATACCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: PTSLPVACGHPLLRYAALCLLWG*FPIPLG
Trigger: CCCCAAAGGTATGGGGAAGCAACCCCAGAGCAGGCA...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR GCA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGCCTCTGATGTCTGCCTaGTCTGGGGTTGCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: PTSLPVACGHPLLRYAALPLMSA*SGVASP
Trigger: TGGGGAAGCAACCCCAGAGCAGGCAGACATCAGAGG...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp AGCACTGTAAGCACGAGCAGAAACCAGCCTCAGCCCGTAGCCCAGGGACCCCCTTTGGGACTCACCCCTTaGACCTCCTTAATAGGCCAT +
Preference number: 2 (lower is better)
Translates to: STVSTSRNQPQPVAQGPPLGLTP*TSLIGH
Trigger: ATGGCCTATTAAGGAGGTCCAAGGGGTGAGTCCCAA...AGGGGGTCCCTGGGCTACGGGCTGAGGCTGGTTTCTGCTCGTGCTTACAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp TACTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCATTCTGGGGCTGGGTTaGGACTCACCCCTTGGACCT +
Preference number: 2 (lower is better)
Translates to: YFAFCHMGPFLASTSVVFILGLG*DSPLGP
Trigger: AGGTCCAAGGGGTGAGTCCCAACCCAGCCCCAGAAT...GAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR TCA 90 bp TCCCTGAGACAATCCACGTGGACCAGGTGCTCTACCCAGTGCCTGGCACCTCATTCAGATATGCAGCCCTaGAGAAGAGACCCTACAGCT +
Preference number: 2 (lower is better)
Translates to: SLRQSTWTRCSTQCLAPHSDMQP*RRDPTA
Trigger: AGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTGA...ATGAGGTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR GCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGCTGCCTTCCTCTCACTaGTCAGTGGCCCATGGACAC +
Preference number: 2 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLLPSSH*SVAHGH
Trigger: GTGTCCATGGGCCACTGAGCAGTGAGAGGAAGGCAG...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR GCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGTGGCCAGCTCTGCACTaGCTTCCTCTCACTGCTCAG +
Preference number: 2 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLWPALH*LPLTAQ
Trigger: CTGAGCAGTGAGAGGAAGGCAGTGCAGAGCTGGCCA...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGAGTGCAACCCACAGATaGGGCTGGGACAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLSATHR*GWDRER
Trigger: CCTTTCCCTGTCCCAGCCCCATCTGTGGGTTGCACT...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp GTACCTTCACTGCACTGTGAAGGCAGAGCTTGGTCCCAGCCTACCTCCAGGGCTAATATATTCTGGGGCTaGGTTGGGACTCACCCCTTG +
Preference number: 2 (lower is better)
Translates to: VPSLHCEGRAWSQPTSRANIFWG*VGTHPL
Trigger: CAAGGGGTGAGTCCCAACCCAGCCCCAGAATATATT...AGCCCTGGAGGTAGGCTGGGACCAAGCTCTGCCTTCACAGTGCAGTGAAGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR CAA 90 bp GGGTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTaGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGAACCAGG +
Preference number: 2 (lower is better)
Translates to: GWGSKEQGSHQNLRL*YICRQVTFETSGTR
Trigger: CCTGGTTCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR TCA 90 bp TGGGAATGGCAGGCAGCAAGGGCTTCCCTCTCGCCTCGTCATCCCATAGTGGGGTTGAAAAACTATTTCTaGAGGTGGGTGGGGGTTTGT +
Preference number: 2 (lower is better)
Translates to: WEWQAARASLSPRHPIVGLKNYF*RWVGVC
Trigger: ACAAACCCCCACCCACCTTCAGAAATAGTTTTTCAA...CCCCACTATGGGATGACGAGGCGAGAGGGAAGCCCTTGCTGCCTGCCATTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR GCA 90 bp TCTCAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACTGGCCTCTGATGTCTaGCTGCTCTGGGGTTGCTTC +
Preference number: 2 (lower is better)
Translates to: SQICSPEEETLQLLGPTLLASDV*LLWGCF
Trigger: GAAGCAACCCCAGAGCAGGCAGACATCAGAGGCCAG...TAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp TCTCAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTAAGTGCAACCCACAGATaGGGCTGGGACAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: SQICSPEEETLQLLGPTLSATHR*GWDRER
Trigger: CCTTTCCCTGTCCCAGCCCCATCTGTGGGTTGCACT...TAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp CTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCAAAATATATTCTGGGGCTaGGTTGGGACTCACCCCTTG +
Preference number: 2 (lower is better)
Translates to: LCLLPHGPFPGIHLRGFQNIFWG*VGTHPL
Trigger: CAAGGGGTGAGTCCCAACCCAGCCCCAGAATATATT...TTGAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR TCA 90 bp TCCCTGAGACAATCCACGTGGACCAGGTGCTCTACCCAGTGCCTGGCACCTCATTTGAAAAACTATTTCTaGAGGTGGGTGGGGGTTTGT +
Preference number: 2 (lower is better)
Translates to: SLRQSTWTRCSTQCLAPHLKNYF*RWVGVC
Trigger: ACAAACCCCCACCCACCTTCAGAAATAGTTTTTCAA...ATGAGGTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp CAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCTTGGGACTCACCCCTTaGACCTCCTTAATAGGCCAT +
Preference number: 2 (lower is better)
Translates to: QICSPEEETLQLLGPTLPLGLTP*TSLIGH
Trigger: ATGGCCTATTAAGGAGGTCCAAGGGGTGAGTCCCAA...GGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR TCA 90 bp CAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCCTCCTTAATAGGCCATaGATCCCAACGACAGAGAGT +
Preference number: 2 (lower is better)
Translates to: QICSPEEETLQLLGPTLPLLNRP*IPTTES
Trigger: ACTCTCTGTCGTTGGGATTCATGGCCTATTAAGGAG...GGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR GCA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTAGGGCTGGCCAGCTCTaGACTGCCTTCCTCTCACTG +
Preference number: 2 (lower is better)
Translates to: HQNLRLLYICRQVTFETSRAGQL*TAFLSL
Trigger: CAGTGAGAGGAAGGCAGTGCAGAGCTGGCCAGCCCT...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGAAAACAAATATATTCTaGGGCTGGGTTGGGACTCAC +
Preference number: 2 (lower is better)
Translates to: PTSLPVACGHPLLRYAALKTNIF*GWVGTH
Trigger: GTGAGTCCCAACCCAGCCCCAGAATATATTTGTTTT...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGAGTACAAAGTTTCTGTaGTTGGGGAACCAGCTTCAT +
Preference number: 2 (lower is better)
Translates to: PTSLPVACGHPLLRYAALSTKFL*LGNQLH
Trigger: ATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACT...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR CAA 90 bp AGTCGACAGTTCATTTTATTGATGCCCACTCCAGGCTGCATAGGGTaGAGGGGTGTACAAGAGGAGAACCAGATTCAGTCCATGCCTGGA +
Preference number: 2 (lower is better)
Translates to: SRQFILLMPTPGCIG*RGVQEENQIQSMPG
Trigger: TCCAGGCATGGACTGAATCTGGTTCTCCTCTTGTACACCCCTCAACCCTATGCAGCCTGGAGTGGGCATCAATAAAATGAACTGTCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR TCA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGAACCTTCACTGCACTGTaGAGGCAGAGCTTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: QNLRLLYICRQVTFETSGTFTAL*RQSLVP
Trigger: TGGGACCAAGCTCTGCCTTCACAGTGCAGTGAAGGT...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR GCA 90 bp TTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGGGCGTGGGGGTTTGTAAGTaGAACCCACAGATGGGGCTG +
Preference number: 2 (lower is better)
Translates to: FLSLVQSFCGWGTSFMSGVGVCK*NPQMGL
Trigger: CAGCCCCATCTGTGGGTTGCACTTACAAACCCCCAC...GCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR GCA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTTGCCTGCTCTGGGGTTaGTTCCCCATACCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: HQNLRLLYICRQVTFETSCLLWG*FPIPLG
Trigger: CCCCAAAGGTATGGGGAAGCAACCCCAGAGCAGGCA...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp TACTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCAGTACAAAGTTTCTGTaGTTGGGGAACCAGCTTCAT +
Preference number: 2 (lower is better)
Translates to: YFAFCHMGPFLASTSVVFSTKFL*LGNQLH
Trigger: ATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACT...GAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGAACATGGGCCCTTTCCTaGCATCCACCTCCGTGGTTT +
Preference number: 2 (lower is better)
Translates to: QNLRLLYICRQVTFETSGTWALS*HPPPWF
Trigger: AAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGT...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR TCA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTTCTTGGTTCCAGCTCTaGGTGGTGTCAGCGGTCATG +
Preference number: 2 (lower is better)
Translates to: HQNLRLLYICRQVTFETSSWFQL*VVSAVM
Trigger: CATGACCGCTGACACCACTCAGAGCTGGAACCAAGA...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGAAAACAAATATATTCTaGGGCTGGGTTGGGACTCAC +
Preference number: 2 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLKTNIF*GWVGTH
Trigger: GTGAGTCCCAACCCAGCCCCAGAATATATTTGTTTT...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTTTGCCTTCTGCCACATaGGCCCTTTCCTGGCATCCA +
Preference number: 2 (lower is better)
Translates to: HQNLRLLYICRQVTFETSLPSAT*ALSWHP
Trigger: TGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAA...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CCA 90 bp TCCTTAATAGGCCATGAATCCCAACGACAGAGAGTCTTGATGTTGAAAAACTATAGGCAGGCGAGGCCCTaGCAGTCATTCTCGACAGGA +
Preference number: 2 (lower is better)
Translates to: SLIGHESQRQRVLMLKNYRQARP*QSFSTG
Trigger: TCCTGTCGAGAATGACTGCCAGGGCCTCGCCTGCCT...ATAGTTTTTCAACATCAAGACTCTCTGTCGTTGGGATTCATGGCCTATTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR GCA 90 bp TCCTTAATAGGCCATGAATCCCAACGACAGAGAGTCTTGATGTTGAAAAACTATGTGGGGGTTTGTAAGTaGAACCCACAGATGGGGCTG +
Preference number: 2 (lower is better)
Translates to: SLIGHESQRQRVLMLKNYVGVCK*NPQMGL
Trigger: CAGCCCCATCTGTGGGTTGCACTTACAAACCCCCAC...ATAGTTTTTCAACATCAAGACTCTCTGTCGTTGGGATTCATGGCCTATTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR TCA 72 bp GATCTTGGTTCCAGCTCTGAGTGGTGTCAGCGGTCATaGCACCCCAGGTCAGGGCCCCTAGCAACCGCAGAG +
Preference number: 3 (lower is better)
Translates to: DLGSSSEWCQRS*HPRSGPLATAE
Trigger: CTCTGCGGTTGCTAGGGGCCCTGACCTGGGGTGTCATGACCGCTGACACCACTCAGAGCTGGAACCAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR GCA 72 bp TTCAAGGCTTCCCTGAGACAATCCACGTGGACCAGGTaGTCTACCCAGTGCCTGGCACCTCATCACCACCCC +
Preference number: 3 (lower is better)
Translates to: FKASLRQSTWTR*STQCLAPHHHP
Trigger: GGGGTGGTGATGAGGTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGAAGCCTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR CCA 72 bp GGAGAACCAGATTCAGTCCATGCCTGGAGGTTAGTCTaGGGGGCCGGCGGGATGGACACACAGACAGACACA +
Preference number: 3 (lower is better)
Translates to: GEPDSVHAWRLV*GAGGMDTQTDT
Trigger: TGTGTCTGTCTGTGTGTCCATCCCGCCGGCCCCCCAGACTAACCTCCAGGCATGGACTGAATCTGGTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CAA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGGTTGGGACTCACCCCTaGGACCTCCTTAATAGGCCA +
Preference number: 3 (lower is better)
Translates to: PTSLPVACGHPLLRYAALVGTHP*DLLNRP
Trigger: TGGCCTATTAAGGAGGTCCAAGGGGTGAGTCCCAAC...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR TCA 72 bp TCCTGGCATCCACCTCCGTGGTTTTCAAGGCTTCCCTaGGACAATCCACGTGGACCAGGTGCTCTACCCAGT +
Preference number: 3 (lower is better)
Translates to: SWHPPPWFSRLP*DNPRGPGALPS
Trigger: ACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGAAGCCTTGAAAACCACGGAGGTGGATGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR CCA 72 bp TCCGTGGTTTTCAAGGCTTCCCTGAGACAATCCACGTaGACCAGGTGCTCTACCCAGTGCCTGGCACCTCAT +
Preference number: 3 (lower is better)
Translates to: SVVFKASLRQST*TRCSTQCLAPH
Trigger: ATGAGGTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGAAGCCTTGAAAACCACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR TCA 72 bp GCTATCTACGGACTATCTAGATCTTGGTTCCAGCTCTaGGTGGTGTCAGCGGTCATGACACCCCAGGTCAGG +
Preference number: 3 (lower is better)
Translates to: AIYGLSRSWFQL*VVSAVMTPQVR
Trigger: CCTGACCTGGGGTGTCATGACCGCTGACACCACTCAGAGCTGGAACCAAGATCTAGATAGTCCGTAGATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR TCA 72 bp TGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTaGAGAAGAGACCCTACAGCTCTTAGGGCCAACACT +
Preference number: 3 (lower is better)
Translates to: WHVGIHFSDMQP*RRDPTALRANT
Trigger: AGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR CCA 72 bp CTCCAGGCAGAAGCAGGTGCAAAAACAAATATATTCTaGGGCTGGGTTGGGACTCACCCCTTGGACCTCCTT +
Preference number: 3 (lower is better)
Translates to: LQAEAGAKTNIF*GWVGTHPLDLL
Trigger: AAGGAGGTCCAAGGGGTGAGTCCCAACCCAGCCCCAGAATATATTTGTTTTTGCACCTGCTTCTGCCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CAA 90 bp TGGGAATGGCAGGCAGCAAGGGCTTCCCTCTCGCCTCGTCATCCCATAGTGGGGCAACGACAGAGAGTCTaGATGTTGAAAAACTATTTC +
Preference number: 3 (lower is better)
Translates to: WEWQAARASLSPRHPIVGQRQRV*MLKNYF
Trigger: GAAATAGTTTTTCAACATCAAGACTCTCTGTCGTTG...CCCCACTATGGGATGACGAGGCGAGAGGGAAGCCCTTGCTGCCTGCCATTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR CCA 72 bp CAAATATATTCTGGGGCTGGGTTGGGACTCACCCCTTaGACCTCCTTAATAGGCCATGAATCCCAACGACAG +
Preference number: 3 (lower is better)
Translates to: QIYSGAGLGLTP*TSLIGHESQRQ
Trigger: CTGTCGTTGGGATTCATGGCCTATTAAGGAGGTCCAAGGGGTGAGTCCCAACCCAGCCCCAGAATATATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR CCA 72 bp AGGGACCCCCTTTCTTTCACTAGTACAAAGTTTCTGTaGTTGGGGAACCAGCTTCATGTCGGGCTAGGCACT +
Preference number: 3 (lower is better)
Translates to: RDPLSFTSTKFL*LGNQLHVGLGT
Trigger: AGTGCCTAGCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAAGGGGGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CAA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGATTCTTGGCCTGTACTTaGCCTTCTGCCACATGGGCC +
Preference number: 3 (lower is better)
Translates to: QNLRLLYICRQVTFETSGFLACT*PSATWA
Trigger: GGCCCATGTGGCAGAAGGCAAAGTACAGGCCAAGAA...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR GCA 72 bp AGTCGACAGTTCATTTTATTGATGCCCACTCCAGGCTaGATAGGGTTGAGGGGTGTACAAGAGGAGAACCAG +
Preference number: 3 (lower is better)
Translates to: SRQFILLMPTPG*IGLRGVQEENQ
Trigger: CTGGTTCTCCTCTTGTACACCCCTCAACCCTATGCAGCCTGGAGTGGGCATCAATAAAATGAACTGTCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CAA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGTTGGGACTCACCCCTaGGACCTCCTTAATAGGCCA +
Preference number: 3 (lower is better)
Translates to: HQNLRLLYICRQVTFETSVGTHP*DLLNRP
Trigger: TGGCCTATTAAGGAGGTCCAAGGGGTGAGTCCCAAC...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CAA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGAACAAAGTTTCTGTGGTaGGGGAACCAGCTTCATGTC +
Preference number: 3 (lower is better)
Translates to: QNLRLLYICRQVTFETSGTKFLW*GNQLHV
Trigger: GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGT...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR TCA 72 bp GTTGGGACTCACCCCTTGGACCTCCTTAATAGGCCATaGATCCCAACGACAGAGAGTCTTGATGTTGAAAAA +
Preference number: 3 (lower is better)
Translates to: VGTHPLDLLNRP*IPTTESLDVEK
Trigger: TTTTTCAACATCAAGACTCTCTGTCGTTGGGATTCATGGCCTATTAAGGAGGTCCAAGGGGTGAGTCCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR-3UTR CAA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATCAACGACAGAGAGTCTaGATGTTGAAAAACTATTTC +
Preference number: 3 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYQRQRV*MLKNYF
Trigger: GAAATAGTTTTTCAACATCAAGACTCTCTGTCGTTG...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR TCA 72 bp CAACGACAGAGAGTCTTGATGTTGAAAAACTATTTCTaGAGGTGGGTGGGGGTTTGTAAGTGCAACCCACAG +
Preference number: 3 (lower is better)
Translates to: QRQRVLMLKNYF*RWVGVCKCNPQ
Trigger: CTGTGGGTTGCACTTACAAACCCCCACCCACCTTCAGAAATAGTTTTTCAACATCAAGACTCTCTGTCGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp CCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGGTAGGAGCGGCTGCGCTTGGCATTaGGCTCCTGCTCCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: PGVGPHHGHSPERRAGRSGCAWH*APAPSD
Trigger: GTCGCTGGGAGCAGGAGCTCAATGCCAAGCGCAGCC...GCTCCTACCTGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TGGGAATGGCAGGCAGCAAGGGCTTCCCTCTCGCCTCGTCATCCCATAGTGGGGTGGTGTCAGCGGTCATaGCACCCCAGGTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: WEWQAARASLSPRHPIVGWCQRS*HPRSGP
Trigger: GGGCCCTGACCTGGGGTGTCATGACCGCTGACACCA...CCCCACTATGGGATGACGAGGCGAGAGGGAAGCCCTTGCTGCCTGCCATTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp AAGGGGACTCCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGAATCTTCTCCAGGGTaGGGACGCCCCAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: KGTPGVGPHHGHSPERRAESSPG*GRPSHA
Trigger: GGCGTGGCTGGGGCGTCCGCACCCTGGAGAAGATTC...TGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGGAGTCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp AGCACTGTAAGCACGAGCAGAAACCAGCCTCAGCCCGTAGCCCAGGGACCCCCTTGGCCAGCTGGCCTGTaGCTCGTTCAATCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: STVSTSRNQPQPVAQGPPWPAGL*LVQSAP
Trigger: AGGGGCGGATTGAACGAGTCACAGGCCAGCTGGCCA...AGGGGGTCCCTGGGCTACGGGCTGAGGCTGGTTTCTGCTCGTGCTTACAGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR GCA 90 bp AGCACTGTAAGCACGAGCAGAAACCAGCCTCAGCCCGTAGCCCAGGGACCCCCTGCAGCCTCCAGTGGGTaGCCACAGACAGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: STVSTSRNQPQPVAQGPPAASSG*PQTVLA
Trigger: TGCCAGGACTGTCTGTGGGCACCCACTGGAGGCTGC...AGGGGGTCCCTGGGCTACGGGCTGAGGCTGGTTTCTGCTCGTGCTTACAGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGGTAGGAGCAGCAGGGAGGAGGCCTaGAGCAGACCCCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: PGVGPHHGHSPERRAGRSSREEA*SRPLNL
Trigger: GAGATTGAGGGGTCTGCTGCAGGCCTCCTCCCTGCT...GCTCCTACCTGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp AAGGGGACTCCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGCCTACCTCCAGGGCTaGCCAGCTCTGCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: KGTPGVGPHHGHSPERRAAYLQG*PALHCL
Trigger: AAGGCAGTGCAGAGCTGGCCAGCCCTGGAGGTAGGC...TGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGGAGTCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp AGCACTGTAAGCACGAGCAGAAACCAGCCTCAGCCCGTAGCCCAGGGACCCCCTGCCTACCTCCAGGGCTaGCCAGCTCTGCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: STVSTSRNQPQPVAQGPPAYLQG*PALHCL
Trigger: AAGGCAGTGCAGAGCTGGCCAGCCCTGGAGGTAGGC...AGGGGGTCCCTGGGCTACGGGCTGAGGCTGGTTTCTGCTCGTGCTTACAGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp TGGGAATGGCAGGCAGCAAGGGCTTCCCTCTCGCCTCGTCATCCCATAGTGGGGCCAGGCCCTCCAGCATaGTGTGATTCGAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: WEWQAARASLSPRHPIVGPGPPA*CDSSSV
Trigger: CACGCTGCTCGAATCACAGCATGCTGGAGGGCCTGG...CCCCACTATGGGATGACGAGGCGAGAGGGAAGCCCTTGCTGCCTGCCATTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR GCA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGCGGAGCGCCCGCCTCTaGTTGGCCTTCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: PTSLPVACGHPLLRYAALRSARL*LAFCTR
Trigger: CCTGGTGCAGAAGGCCAAGCAGAGGCGGGCGCTCCG...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp GCAGCAGTGGGGGAGGTGCATGTAGCTTCAGGCCCCCTCAGTCAGTCTGGCCTCCTGGCCTCTGATGTCTaGCTGCTCTGGGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: AAVGEVHVASGPLSQSGLLASDV*LLWGCF
Trigger: GAAGCAACCCCAGAGCAGGCAGACATCAGAGGCCAG...GAGGCCAGACTGACTGAGGGGGCCTGAAGCTACATGCACCTCCCCCACTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGGTAGGAGCCTGCCTTCCTCTCACTaGTCAGTGGCCCATGGACAC +
Preference number: 4 (lower is better)
Translates to: PGVGPHHGHSPERRAGRSLPSSH*SVAHGH
Trigger: GTGTCCATGGGCCACTGAGCAGTGAGAGGAAGGCAG...GCTCCTACCTGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGGTAGGAGCAGGTGCTCTACCCAGTaGCTGGCACCTCATCACCAC +
Preference number: 4 (lower is better)
Translates to: PGVGPHHGHSPERRAGRSRCSTQ*LAPHHH
Trigger: GTGGTGATGAGGTGCCAGGCACTGGGTAGAGCACCT...GCTCCTACCTGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp AGCACTGTAAGCACGAGCAGAAACCAGCCTCAGCCCGTAGCCCAGGGACCCCCTAGTTGCACTCGTAGATaGGCAGCCCGGCTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: STVSTSRNQPQPVAQGPPSCTRR*AARLEA
Trigger: GGCTTCGAGCCGGGCTGCCCATCTACGAGTGCAACT...AGGGGGTCCCTGGGCTACGGGCTGAGGCTGGTTTCTGCTCGTGCTTACAGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp AGCACTGTAAGCACGAGCAGAAACCAGCCTCAGCCCGTAGCCCAGGGACCCCCTAGGCAGGCGAGGCCCTaGCAGTCATTCTCGACAGGA +
Preference number: 4 (lower is better)
Translates to: STVSTSRNQPQPVAQGPPRQARP*QSFSTG
Trigger: TCCTGTCGAGAATGACTGCCAGGGCCTCGCCTGCCT...AGGGGGTCCCTGGGCTACGGGCTGAGGCTGGTTTCTGCTCGTGCTTACAGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TACTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCGGCAAACTTGTGCAGTaGCGCCCCCGGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: YFAFCHMGPFLASTSVVFGKLVQ*RPRAAA
Trigger: GGCTGCTGCCCGGGGGCGTCACTGCACAAGTTTGCC...GAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp CCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGGTAGGAGCACCTTCACTGCACTGTaGAGGCAGAGCTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PGVGPHHGHSPERRAGRSTFTAL*RQSLVP
Trigger: TGGGACCAAGCTCTGCCTTCACAGTGCAGTGAAGGT...GCTCCTACCTGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGGTAGGAGCACACACTTGAGATTCTaGCGTGGCTCCCAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PGVGPHHGHSPERRAGRSTHLRF*RGSQVL
Trigger: GAGCACCTGGGAGCCACGGCAGAATCTCAAGTGTGT...GCTCCTACCTGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp TCCCTGAGACAATCCACGTGGACCAGGTGCTCTACCCAGTGCCTGGCACCTCATTTGGCATTGAGCTCCTaGTCCCAGCGACGGAGCGCC +
Preference number: 4 (lower is better)
Translates to: SLRQSTWTRCSTQCLAPHLALSS*SQRRSA
Trigger: GGCGCTCCGTCGCTGGGAGCAGGAGCTCAATGCCAA...ATGAGGTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp GCAGCAGTGGGGGAGGTGCATGTAGCTTCAGGCCCCCTCAGTCAGTCTGGCCTCGTGGGGGTTTGTAAGTaGAACCCACAGATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AAVGEVHVASGPLSQSGLVGVCK*NPQMGL
Trigger: CAGCCCCATCTGTGGGTTGCACTTACAAACCCCCAC...GAGGCCAGACTGACTGAGGGGGCCTGAAGCTACATGCACCTCCCCCACTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp AGCACTGTAAGCACGAGCAGAAACCAGCCTCAGCCCGTAGCCCAGGGACCCCCTTGCCTGCTCTGGGGTTaGTTCCCCATACCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: STVSTSRNQPQPVAQGPPCLLWG*FPIPLG
Trigger: CCCCAAAGGTATGGGGAAGCAACCCCAGAGCAGGCA...AGGGGGTCCCTGGGCTACGGGCTGAGGCTGGTTTCTGCTCGTGCTTACAGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp TGGGAATGGCAGGCAGCAAGGGCTTCCCTCTCGCCTCGTCATCCCATAGTGGGGAGGTGCTCTACCCAGTaGCTGGCACCTCATCACCAC +
Preference number: 4 (lower is better)
Translates to: WEWQAARASLSPRHPIVGRCSTQ*LAPHHH
Trigger: GTGGTGATGAGGTGCCAGGCACTGGGTAGAGCACCT...CCCCACTATGGGATGACGAGGCGAGAGGGAAGCCCTTGCTGCCTGCCATTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGGTAGGAGCTCTGCACCAGGTAGTTaGCCAAGCTTGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PGVGPHHGHSPERRAGRSSAPGS*PSLGPG
Trigger: ACCTGGACCCAAGCTTGGCCAACTACCTGGTGCAGA...GCTCCTACCTGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGGTAGGAGCCCTCGCCTGCCCGGATaGTTCTTGTGGCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: PGVGPHHGHSPERRAGRSPRLPG*FLWQRK
Trigger: CTTTCTTTGCCACAAGAACCATCCGGGCAGGCGAGG...GCTCCTACCTGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp TACTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCGCCTGGAGGTTAGTCTaGGGGGCCGGCGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: YFAFCHMGPFLASTSVVFAWRLV*GAGGMD
Trigger: GTCCATCCCGCCGGCCCCCCAGACTAACCTCCAGGC...GAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp AGCACTGTAAGCACGAGCAGAAACCAGCCTCAGCCCGTAGCCCAGGGACCCCCTTGTTGTAATCAAAGGTaGGCTCCTCGCCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: STVSTSRNQPQPVAQGPPCCNQR*APRLPG
Trigger: TCCGGGCAGGCGAGGAGCTCACCTTTGATTACAACA...AGGGGGTCCCTGGGCTACGGGCTGAGGCTGGTTTCTGCTCGTGCTTACAGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGGTCTTTGACCGGTGGTaGCGCCGGAGCAGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PTSLPVACGHPLLRYAALVFDRW*RRSSSL
Trigger: AAGGGAGCTGCTCCGGCGGCACCACCGGTCAAAGAC...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp TCCCTGAGACAATCCACGTGGACCAGGTGCTCTACCCAGTGCCTGGCACCTCATAGGGCTGGCCAGCTCTaGACTGCCTTCCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: SLRQSTWTRCSTQCLAPHRAGQL*TAFLSL
Trigger: CAGTGAGAGGAAGGCAGTGCAGAGCTGGCCAGCCCT...ATGAGGTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp AGCACTGTAAGCACGAGCAGAAACCAGCCTCAGCCCGTAGCCCAGGGACCCCCTATGCCCACTCCAGGCTaGATAGGGTTGAGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: STVSTSRNQPQPVAQGPPMPTPG*IGLRGV
Trigger: TACACCCCTCAACCCTATGCAGCCTGGAGTGGGCAT...AGGGGGTCCCTGGGCTACGGGCTGAGGCTGGTTTCTGCTCGTGCTTACAGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp AAGGGGACTCCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGCTGCAGCCTGTCAGTaGGTCAGCCAGTCTGTCATT +
Preference number: 4 (lower is better)
Translates to: KGTPGVGPHHGHSPERRAAAACQ*VSQSVI
Trigger: AATGACAGACTGGCTGACCCACTGACAGGCTGCAGC...TGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGGAGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR CCA 90 bp CTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCAACAGGGCAGGAGAGCTTaGCCAGGCGGCACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LCLLPHGPFPGIHLRGFQQGRRA*PGGTGP
Trigger: AGGACCTGTGCCGCCTGGCCAAGCTCTCCTGCCCTG...TTGAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGGGGGTCTTTGACCGGTaGTGCCGCCGGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLGVFDR*CRRSSS
Trigger: GGAGCTGCTCCGGCGGCACCACCGGTCAAAGACCCC...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TCCCTGAGACAATCCACGTGGACCAGGTGCTCTACCCAGTGCCTGGCACCTCATTTCTCAGCATCCGACTaGCCGCACCGTCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SLRQSTWTRCSTQCLAPHFSASD*PHRLSG
Trigger: ACCTGACAGACGGTGCGGTCAGTCGGATGCTGAGAA...ATGAGGTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR TCA 90 bp AGCACTGTAAGCACGAGCAGAAACCAGCCTCAGCCCGTAGCCCAGGGACCCCCTCTCCCACGTACTCCATaGCGAAGCTGTTCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: STVSTSRNQPQPVAQGPPLPRTP*RSCSCE
Trigger: TTCGCAAGAACAGCTTCGTCATGGAGTACGTGGGAG...AGGGGGTCCCTGGGCTACGGGCTGAGGCTGGTTTCTGCTCGTGCTTACAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGTGGTGTCAGCGGTCATaGCACCCCAGGTCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLWCQRS*HPRSGP
Trigger: GGGCCCTGACCTGGGGTGTCATGACCGCTGACACCA...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp GTACCTTCACTGCACTGTGAAGGCAGAGCTTGGTCCCAGCCTACCTCCAGGGCTTGGCAAAGAAAGCGATaGGGGGCAGCCGCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: VPSLHCEGRAWSQPTSRAWQRKR*GAAARQ
Trigger: TTGACGAGCGGCTGCCCCGCATCGCTTTCTTTGCCA...AGCCCTGGAGGTAGGCTGGGACCAAGCTCTGCCTTCACAGTGCAGTGAAGGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp ATTTCTGAAGGTGGGTGGGGGTTTGTAAGTGCAACCCACAGATGGGGCTGGGACGGTGAGCTCCTCGCCTaGCCGGATGGTTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: ISEGGWGFVSATHRWGWDGELLA*PDGSCG
Trigger: GCCACAAGAACCATCCGGGCAGGCGAGGAGCTCACC...GTCCCAGCCCCATCTGTGGGTTGCACTTACAAACCCCCACCCACCTTCAGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGTGGAGTCCATGCGGGTaGTCTCCATGTCCACGGGGT +
Preference number: 4 (lower is better)
Translates to: PTSLPVACGHPLLRYAALWSPCG*SPCPRG
Trigger: ACCCCGTGGACATGGAGAGCACCCGCATGGACTCCA...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGGTAGGAGCACTCAGTCCCACACTTaGATTCAATACGGACCCGCT +
Preference number: 4 (lower is better)
Translates to: PGVGPHHGHSPERRAGRSTQSHT*IQYGPA
Trigger: AGCGGGTCCGTATTGAATGCAAGTGTGGGACTGAGT...GCTCCTACCTGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGAGGGCTGGCCAGCTCTaGACTGCCTTCCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: PTSLPVACGHPLLRYAALRAGQL*TAFLSL
Trigger: CAGTGAGAGGAAGGCAGTGCAGAGCTGGCCAGCCCT...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGGTAGGAGCACTCATCCCCACCATTaGTCAAGTCAGTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PGVGPHHGHSPERRAGRSTHPHH*SSQSPL
Trigger: CAGAGGAGACTGACTTGACCAATGGTGGGGATGAGT...GCTCCTACCTGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR CCA 90 bp TCCCTGAGACAATCCACGTGGACCAGGTGCTCTACCCAGTGCCTGGCACCTCATCCCCCTCAGTCAGTCTaGCCTCAGACTTCTAAGGGC +
Preference number: 4 (lower is better)
Translates to: SLRQSTWTRCSTQCLAPHPPQSV*PQTSKG
Trigger: GCCCTTAGAAGTCTGAGGCCAGACTGACTGAGGGGG...ATGAGGTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GTACCTTCACTGCACTGTGAAGGCAGAGCTTGGTCCCAGCCTACCTCCAGGGCTAGTGCAACCCACAGATaGGGCTGGGACAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: VPSLHCEGRAWSQPTSRASATHR*GWDRER
Trigger: CCTTTCCCTGTCCCAGCCCCATCTGTGGGTTGCACT...AGCCCTGGAGGTAGGCTGGGACCAAGCTCTGCCTTCACAGTGCAGTGAAGGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp GCAGCAGTGGGGGAGGTGCATGTAGCTTCAGGCCCCCTCAGTCAGTCTGGCCTCCAAGTCAGTCTCCTCTaGTGCGTTGAAGCTGAGATT +
Preference number: 4 (lower is better)
Translates to: AAVGEVHVASGPLSQSGLQVSLL*CVEAEI
Trigger: AATCTCAGCTTCAACGCATCAGAGGAGACTGACTTG...GAGGCCAGACTGACTGAGGGGGCCTGAAGCTACATGCACCTCCCCCACTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR TCA 90 bp TCCCTGAGACAATCCACGTGGACCAGGTGCTCTACCCAGTGCCTGGCACCTCATCCTCATTCTCTACAGTaGTGCGTCCCAGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLRQSTWTRCSTQCLAPHPHSLQ*CVPDGC
Trigger: GCAGCCATCTGGGACGCATCACTGTAGAGAATGAGG...ATGAGGTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TCCCTGAGACAATCCACGTGGACCAGGTGCTCTACCCAGTGCCTGGCACCTCATCAACACGGTACTCATTaGTGTACACGAAGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SLRQSTWTRCSTQCLAPHQHGTH*CTRRPA
Trigger: CGCGGGCCTTCGTGTACATCAATGAGTACCGTGTTG...ATGAGGTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TCTCAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTAGGCAAACTTGTGCAGTaGCGCCCCCGGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SQICSPEEETLQLLGPTLGKLVQ*RPRAAA
Trigger: GGCTGCTGCCCGGGGGCGTCACTGCACAAGTTTGCC...TAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp GTACCTTCACTGCACTGTGAAGGCAGAGCTTGGTCCCAGCCTACCTCCAGGGCTTGTTGTAATCAAAGGTaGGCTCCTCGCCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: VPSLHCEGRAWSQPTSRACCNQR*APRLPG
Trigger: TCCGGGCAGGCGAGGAGCTCACCTTTGATTACAACA...AGCCCTGGAGGTAGGCTGGGACCAAGCTCTGCCTTCACAGTGCAGTGAAGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp CAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCCCAGTGGAACCAGGGTaGGCACAAAGGGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QICSPEEETLQLLGPTLPPVEPG*AQRAGV
Trigger: GACCCCAGCCCTTTGTGCTCACCCTGGTTCCACTGG...GGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp AAGGGGACTCCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGATTCCAAGAAGACTTaGAACACACGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KGTPGVGPHHGHSPERRADSKKT*NTRCSL
Trigger: CAGGCTGCAGCGTGTGTTGCAAGTCTTCTTGGAATC...TGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGGAGTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR GCA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGGCCGTGGCTCCCAGGTaGTCTCTGAGTCTGGATATC +
Preference number: 4 (lower is better)
Translates to: PTSLPVACGHPLLRYAALAVAPR*SLSLDI
Trigger: GATATCCAGACTCAGAGAGCACCTGGGAGCCACGGC...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGGCAGCCTCCAGTGGGTaGCCACAGACAGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLAASSG*PQTVLA
Trigger: TGCCAGGACTGTCTGTGGGCACCCACTGGAGGCTGC...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp TGGGAATGGCAGGCAGCAAGGGCTTCCCTCTCGCCTCGTCATCCCATAGTGGGGCATCCGTGCGGAAGATaGAGAGGTCATATCGGATAC +
Preference number: 4 (lower is better)
Translates to: WEWQAARASLSPRHPIVGHPCGR*RGHIGY
Trigger: GTATCCGATATGACCTCTGCATCTTCCGCACGGATG...CCCCACTATGGGATGACGAGGCGAGAGGGAAGCCCTTGCTGCCTGCCATTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp GGGAGGAGGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACACGCCCATCATCCGTaGGGAAGATGCAGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GRRPAADPSISRQKQVQKHAHHP*GRCRGH
Trigger: ATGACCTCTGCATCTTCCGCACGGATGATGGGCGTG...TTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCCTCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp GTACCTTCACTGCACTGTGAAGGCAGAGCTTGGTCCCAGCCTACCTCCAGGGCTCACGCCCATCATCCGTaGGGAAGATGCAGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VPSLHCEGRAWSQPTSRAHAHHP*GRCRGH
Trigger: ATGACCTCTGCATCTTCCGCACGGATGATGGGCGTG...AGCCCTGGAGGTAGGCTGGGACCAAGCTCTGCCTTCACAGTGCAGTGAAGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp AAGGGGACTCCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCACAAAGTGGGAGATGTTaGCATAGTAGGCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: KGTPGVGPHHGHSPERRAQSGRC*HSRRHP
Trigger: TGGATGCCGCCTACTATGGCAACATCTCCCACTTTG...TGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGGAGTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGTGGCCAGCTCTGCACTaGCTTCCTCTCACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PTSLPVACGHPLLRYAALWPALH*LPLTAQ
Trigger: CTGAGCAGTGAGAGGAAGGCAGTGCAGAGCTGGCCA...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATCAGGGCAGGAGAGCTTaGCCAGGCGGCACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYQGRRA*PGGTGP
Trigger: AGGACCTGTGCCGCCTGGCCAAGCTCTCCTGCCCTG...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GTACCTTCACTGCACTGTGAAGGCAGAGCTTGGTCCCAGCCTACCTCCAGGGCTTCTGCACCAGGTAGTTaGCCAAGCTTGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VPSLHCEGRAWSQPTSRASAPGS*PSLGPG
Trigger: ACCTGGACCCAAGCTTGGCCAACTACCTGGTGCAGA...AGCCCTGGAGGTAGGCTGGGACCAAGCTCTGCCTTCACAGTGCAGTGAAGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GGGAGGAGGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACCCGGATGGTTCTTGTaGCAAAGAAAGCGATGCGGG +
Preference number: 4 (lower is better)
Translates to: GRRPAADPSISRQKQVQKPGWFL*QRKRCG
Trigger: CCCGCATCGCTTTCTTTGCCACAAGAACCATCCGGG...TTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCCTCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp ATTTCTGAAGGTGGGTGGGGGTTTGTAAGTGCAACCCACAGATGGGGCTGGGACAGGCAGGCGAGGCCCTaGCAGTCATTCTCGACAGGA +
Preference number: 4 (lower is better)
Translates to: ISEGGWGFVSATHRWGWDRQARP*QSFSTG
Trigger: TCCTGTCGAGAATGACTGCCAGGGCCTCGCCTGCCT...GTCCCAGCCCCATCTGTGGGTTGCACTTACAAACCCCCACCCACCTTCAGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGATTCTGGGGCTGGGTTaGGACTCACCCCTTGGACCT +
Preference number: 4 (lower is better)
Translates to: PTSLPVACGHPLLRYAALILGLG*DSPLGP
Trigger: AGGTCCAAGGGGTGAGTCCCAACCCAGCCCCAGAAT...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp TCCCTGAGACAATCCACGTGGACCAGGTGCTCTACCCAGTGCCTGGCACCTCATCTGAGACAATCCACGTaGACCAGGTGCTCTACCCAG +
Preference number: 4 (lower is better)
Translates to: SLRQSTWTRCSTQCLAPHLRQST*TRCSTQ
Trigger: CTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAG...ATGAGGTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GGGAGGAGGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACTGAGACAATCCACGTaGACCAGGTGCTCTACCCAG +
Preference number: 4 (lower is better)
Translates to: GRRPAADPSISRQKQVQKLRQST*TRCSTQ
Trigger: CTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAG...TTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCCTCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp CTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCAAGGATACGCACACACTTaGGATTCTGCCGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LCLLPHGPFPGIHLRGFQGYAHT*DSAVAP
Trigger: GGGAGCCACGGCAGAATCTCAAGTGTGTGCGTATCC...TTGAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TACTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCCCGCTCTGCCTCCTCTaGGGTAATGATCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: YFAFCHMGPFLASTSVVFPLCLL*GNDLSH
Trigger: GTGGGAGAGATCATTACCTCAGAGGAGGCAGAGCGG...GAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp GGGAGGAGGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACGAGTCAGACAGCTATaGCGATTTTGCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GRRPAADPSISRQKQVQKRVRQL*RFCSWP
Trigger: TGGCCAGGAGCAAAATCGGCATAGCTGTCTGACTCG...TTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCCTCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR CCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGAGTTGCACTCGTAGATaGGCAGCCCGGCTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLSCTRR*AARLEA
Trigger: GGCTTCGAGCCGGGCTGCCCATCTACGAGTGCAACT...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCAAGGTCAAAGAGGTAGGTaGCGCCCTGACGGTCGTAGA +
Preference number: 4 (lower is better)
Translates to: LCLLPHGPFPGIHLRGFQGQRGR*RPDGRR
Trigger: TCTACGACCGTCAGGGCGCCACCTACCTCTTTGACC...TTGAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp TACTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCCAGCCAGGCCAAAGTTaGAGTCCATGCGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: YFAFCHMGPFLASTSVVFQPGQS*SPCGCS
Trigger: AGAGCACCCGCATGGACTCCAACTTTGGCCTGGCTG...GAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCAAATTCTGGGGCTGGGTTaGGACTCACCCCTTGGACCT +
Preference number: 4 (lower is better)
Translates to: LCLLPHGPFPGIHLRGFQILGLG*DSPLGP
Trigger: AGGTCCAAGGGGTGAGTCCCAACCCAGCCCCAGAAT...TTGAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCAATGTGAAGGCAGAGCTTaGTCCCAGCCTACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LCLLPHGPFPGIHLRGFQCEGRA*SQPTSR
Trigger: CCTGGAGGTAGGCTGGGACCAAGCTCTGCCTTCACA...TTGAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp CAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCGGATACGCACACACTTaGGATTCTGCCGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: QICSPEEETLQLLGPTLPGYAHT*DSAVAP
Trigger: GGGAGCCACGGCAGAATCTCAAGTGTGTGCGTATCC...GGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp GTACCTTCACTGCACTGTGAAGGCAGAGCTTGGTCCCAGCCTACCTCCAGGGCTGGTCACAACTGTGGTTaGCAAAGTGGGAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: VPSLHCEGRAWSQPTSRAGHNCG*QSGRCC
Trigger: GCAACATCTCCCACTTTGTCAACCACAGTTGTGACC...AGCCCTGGAGGTAGGCTGGGACCAAGCTCTGCCTTCACAGTGCAGTGAAGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TACTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCTCTTGGTTCCAGCTCTaGGTGGTGTCAGCGGTCATG +
Preference number: 4 (lower is better)
Translates to: YFAFCHMGPFLASTSVVFSWFQL*VVSAVM
Trigger: CATGACCGCTGACACCACTCAGAGCTGGAACCAAGA...GAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp TCTCAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTAGTCTTTGACCGGTGGTaGCGCCGGAGCAGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SQICSPEEETLQLLGPTLVFDRW*RRSSSL
Trigger: AAGGGAGCTGCTCCGGCGGCACCACCGGTCAAAGAC...TAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp TCTCAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTATTGGCATTGAGCTCCTaGTCCCAGCGACGGAGCGCC +
Preference number: 4 (lower is better)
Translates to: SQICSPEEETLQLLGPTLLALSS*SQRRSA
Trigger: GGCGCTCCGTCGCTGGGAGCAGGAGCTCAATGCCAA...TAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGTGGCAAAGAAAGCGATaGGGGGCAGCCGCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLWQRKR*GAAARQ
Trigger: TTGACGAGCGGCTGCCCCGCATCGCTTTCTTTGCCA...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCCTGCCTTCCTCTCACTaGTCAGTGGCCCATGGACAC +
Preference number: 4 (lower is better)
Translates to: QICSPEEETLQLLGPTLPLPSSH*SVAHGH
Trigger: GTGTCCATGGGCCACTGAGCAGTGAGAGGAAGGCAG...GGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGAGGGGTCTTTGACCGGTaGTGCCGCCGGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QNLRLLYICRQVTFETSGGVFDR*CRRSSS
Trigger: GGAGCTGCTCCGGCGGCACCACCGGTCAAAGACCCC...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GGGAGGAGGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACCTTCCAGTGGCATGTaGGCATCCACTTCTCAGATA +
Preference number: 4 (lower is better)
Translates to: GRRPAADPSISRQKQVQKPSSGM*ASTSQI
Trigger: TATCTGAGAAGTGGATGCCCACATGCCACTGGAAGG...TTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCCTCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp ATTTCTGAAGGTGGGTGGGGGTTTGTAAGTGCAACCCACAGATGGGGCTGGGACACATGGGCCCTTTCCTaGCATCCACCTCCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: ISEGGWGFVSATHRWGWDTWALS*HPPPWF
Trigger: AAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGT...GTCCCAGCCCCATCTGTGGGTTGCACTTACAAACCCCCACCCACCTTCAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATCTCCCAGGTGCTCTCTaGGTCTGGATATCCACGCCA +
Preference number: 4 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYLPGAL*VWISTP
Trigger: TGGCGTGGATATCCAGACTCAGAGAGCACCTGGGAG...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGGGCGGCTGCGCTTGGCATTaGGCTCCTGCTCCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: FLSLVQSFCGWGTSFMSGGCAWH*APAPSD
Trigger: GTCGCTGGGAGCAGGAGCTCAATGCCAAGCGCAGCC...GCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp GGGAGGAGGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAAAAGTCCTTGTGGAACTaGTTGAGGATACGCACACAC +
Preference number: 4 (lower is better)
Translates to: GRRPAADPSISRQKQVQKKSLWN*LRIRTH
Trigger: GTGTGTGCGTATCCTCAAGCAGTTCCACAAGGACTT...TTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCCTCCTCCC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTCGGAGCGCCCGCCTCTaGTTGGCCTTCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: HQNLRLLYICRQVTFETSRSARL*LAFCTR
Trigger: CCTGGTGCAGAAGGCCAAGCAGAGGCGGGCGCTCCG...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCAAGCTAGAAGAGGTATTTaGGGCAGGACTCAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LCLLPHGPFPGIHLRGFQARRGI*GRTQSH
Trigger: GTGGGACTGAGTCCTGCCGCAAATACCTCTTCTAGC...TTGAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGGTGGGGGTTTGTAAGTaGAACCCACAGATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLVGVCK*NPQMGL
Trigger: CAGCCCCATCTGTGGGTTGCACTTACAAACCCCCAC...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGTTGCTCCTGGCCAGCTaGCCTGTGACTCGTTCAATC +
Preference number: 4 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLLLLAS*PVTRSI
Trigger: GATTGAACGAGTCACAGGCCAGCTGGCCAGGAGCAA...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR CCA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATGTGATGCGTCCCAGATaGCTGCGCTTGGCATTGAGC +
Preference number: 4 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYVMRPR*LRLALS
Trigger: GCTCAATGCCAAGCGCAGCCATCTGGGACGCATCAC...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGCTGTACCACACGATTTaGGCAGTCATAGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLLYHTI*AVIAAA
Trigger: CGCTGCGGCTATGACTGCCCAAATCGTGTGGTACAG...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GTACCTTCACTGCACTGTGAAGGCAGAGCTTGGTCCCAGCCTACCTCCAGGGCTTTGGGGTCACAACTGTaGTTGACAAAGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: VPSLHCEGRAWSQPTSRALGSQL*LTKWEM
Trigger: CATCTCCCACTTTGTCAACCACAGTTGTGACCCCAA...AGCCCTGGAGGTAGGCTGGGACCAAGCTCTGCCTTCACAGTGCAGTGAAGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGCCCGGATGGTTCTTGTaGCAAAGAAAGCGATGCGGG +
Preference number: 4 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLPGWFL*QRKRCG
Trigger: CCCGCATCGCTTTCTTTGCCACAAGAACCATCCGGG...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCCCTCGCCTGCCCGGATaGTTCTTGTGGCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: QICSPEEETLQLLGPTLPPRLPG*FLWQRK
Trigger: CTTTCTTTGCCACAAGAACCATCCGGGCAGGCGAGG...GGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATCCCCCTCAGTCAGTCTaGCCTCAGACTTCTAAGGGC +
Preference number: 4 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYPPQSV*PQTSKG
Trigger: GCCCTTAGAAGTCTGAGGCCAGACTGACTGAGGGGG...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGACATGGGCCCTTTCCTaGCATCCACCTCCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLTWALS*HPPPWF
Trigger: AAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGT...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGCCTGGAGGTTAGTCTaGGGGGCCGGCGGGATGGAC +
Preference number: 4 (lower is better)
Translates to: HQNLRLLYICRQVTFETSAWRLV*GAGGMD
Trigger: GTCCATCCCGCCGGCCCCCCAGACTAACCTCCAGGC...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp ATTTCTGAAGGTGGGTGGGGGTTTGTAAGTGCAACCCACAGATGGGGCTGGGACCACAGGTCCTGCAGCTaGTTCCAAGAAGACTTGCAA +
Preference number: 4 (lower is better)
Translates to: ISEGGWGFVSATHRWGWDHRSCS*FQEDLQ
Trigger: TTGCAAGTCTTCTTGGAATCAGCTGCAGGACCTGTG...GTCCCAGCCCCATCTGTGGGTTGCACTTACAAACCCCCACCCACCTTCAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATCCTCATTCTCTACAGTaGTGCGTCCCAGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYPHSLQ*CVPDGC
Trigger: GCAGCCATCTGGGACGCATCACTGTAGAGAATGAGG...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp CTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCAATCAGATATGCAGCCCTaGAGAAGAGACCCTACAGCT +
Preference number: 4 (lower is better)
Translates to: LCLLPHGPFPGIHLRGFQSDMQP*RRDPTA
Trigger: AGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTGA...TTGAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TACTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCTCAGATATGCAGCCCTaGAGAAGAGACCCTACAGCT +
Preference number: 4 (lower is better)
Translates to: YFAFCHMGPFLASTSVVFSDMQP*RRDPTA
Trigger: AGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTGA...GAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TACTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCTTTTCAAGGCTTCCCTaGGACAATCCACGTGGACCA +
Preference number: 4 (lower is better)
Translates to: YFAFCHMGPFLASTSVVFFSRLP*DNPRGP
Trigger: TGGTCCACGTGGATTGTCTCAGGGAAGCCTTGAAAA...GAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGGGCCCAGTGGAACCAGGGTaGGCACAAAGGGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: FLSLVQSFCGWGTSFMSGPVEPG*AQRAGV
Trigger: GACCCCAGCCCTTTGTGCTCACCCTGGTTCCACTGG...GCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGAAGTCCTTGTGGAACTaGTTGAGGATACGCACACAC +
Preference number: 4 (lower is better)
Translates to: PTSLPVACGHPLLRYAALKSLWN*LRIRTH
Trigger: GTGTGTGCGTATCCTCAAGCAGTTCCACAAGGACTT...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGAAGCGGCAGCGGGAGTTaGACTCGTAGATGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QNLRLLYICRQVTFETSGSGSGS*TRRWAA
Trigger: GGCTGCCCATCTACGAGTGCAACTCCCGCTGCCGCT...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCCAAAGTTGGAGTCCATaGGGGTGCTCTCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: QICSPEEETLQLLGPTLPQSWSP*GCSPCP
Trigger: TGGACATGGAGAGCACCCGCATGGACTCCAACTTTG...GGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CACACAGACAGACACATAGATCTGGCATCTGATAGCAGGGCATACAGTCTCATGAGCAGGGAGGAGGCCTaGAGCAGACCCCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: HTDRHIDLASDSRAYSLMSREEA*SRPLNL
Trigger: GAGATTGAGGGGTCTGCTGCAGGCCTCCTCCCTGCT...CATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTATGTGTCTGTCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CCCCTTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGCGCCCGCCTCTGCTTaGCCTTCTGCACCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: PLSFTSTKFLWLGNQLHVAPASA*PSAPGS
Trigger: ACTACCTGGTGCAGAAGGCCAAGCAGAGGCGGGCGC...GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp TTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGGGCGCGCCCGCCTCTGCTTaGCCTTCTGCACCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: FLSLVQSFCGWGTSFMSGAPASA*PSAPGS
Trigger: ACTACCTGGTGCAGAAGGCCAAGCAGAGGCGGGCGC...GCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp TCTCAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTATGTGAAGGCAGAGCTTaGTCCCAGCCTACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SQICSPEEETLQLLGPTLCEGRA*SQPTSR
Trigger: CCTGGAGGTAGGCTGGGACCAAGCTCTGCCTTCACA...TAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TACTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCCGTCAAGGTTGTCTATaGAGACGTTGTACACCTGCA +
Preference number: 4 (lower is better)
Translates to: YFAFCHMGPFLASTSVVFRQGCL*RRCTPA
Trigger: TGCAGGTGTACAACGTCTTCATAGACAACCTTGACG...GAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTAGCGGCAGCGGGAGTTaGACTCGTAGATGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: HQNLRLLYICRQVTFETSSGSGS*TRRWAA
Trigger: GGCTGCCCATCTACGAGTGCAACTCCCGCTGCCGCT...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGTGAGCTCCTCGCCTaGCCGGATGGTTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: HQNLRLLYICRQVTFETSGELLA*PDGSCG
Trigger: GCCACAAGAACCATCCGGGCAGGCGAGGAGCTCACC...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp TTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGGGCTGGAGTCCATGCGGGTaGTCTCCATGTCCACGGGGT +
Preference number: 4 (lower is better)
Translates to: FLSLVQSFCGWGTSFMSGWSPCG*SPCPRG
Trigger: ACCCCGTGGACATGGAGAGCACCCGCATGGACTCCA...GCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATGCTAGAAGAGGTATTTaGGGCAGGACTCAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYARRGI*GRTQSH
Trigger: GTGGGACTGAGTCCTGCCGCAAATACCTCTTCTAGC...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CACACAGACAGACACATAGATCTGGCATCTGATAGCAGGGCATACAGTCTCATGCTGGCCTCTGATGTCTaGCTGCTCTGGGGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: HTDRHIDLASDSRAYSLMLASDV*LLWGCF
Trigger: GAAGCAACCCCAGAGCAGGCAGACATCAGAGGCCAG...CATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTATGTGTCTGTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATACCAGATTCAGTCCATaGCTGGAGGTTAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYTRFSP*LEVSLG
Trigger: CCCCAGACTAACCTCCAGGCATGGACTGAATCTGGT...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCAAATTTCTGAAGGTGGGTaGGGGTTTGTAAGTGCAACC +
Preference number: 4 (lower is better)
Translates to: LCLLPHGPFPGIHLRGFQISEGG*GFVSAT
Trigger: GGTTGCACTTACAAACCCCCACCCACCTTCAGAAAT...TTGAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp TCCCTGAGACAATCCACGTGGACCAGGTGCTCTACCCAGTGCCTGGCACCTCATAGTACAAAGTTTCTGTaGTTGGGGAACCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SLRQSTWTRCSTQCLAPHSTKFL*LGNQLH
Trigger: ATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACT...ATGAGGTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGCCTTCCAGTGGCATGTaGGCATCCACTTCTCAGATA +
Preference number: 4 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLPSSGM*ASTSQI
Trigger: TATCTGAGAAGTGGATGCCCACATGCCACTGGAAGG...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp CCCCTTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGCACCGTCTGTCAGGTaGTCAGTCAGTCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: PLSFTSTKFLWLGNQLHVAPSVR*SVSQST
Trigger: GGTGCTCTGACTGACTGATCACCTGACAGACGGTGC...GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR TCA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGACTCCCAGGTGCTCTCTaGGTCTGGATATCCACGCCA +
Preference number: 4 (lower is better)
Translates to: QNLRLLYICRQVTFETSGLPGAL*VWISTP
Trigger: TGGCGTGGATATCCAGACTCAGAGAGCACCTGGGAG...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGGGCCCGCTCTGCCTCCTCTaGGGTAATGATCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FLSLVQSFCGWGTSFMSGPLCLL*GNDLSH
Trigger: GTGGGAGAGATCATTACCTCAGAGGAGGCAGAGCGG...GCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGACAGCTATGCCGATTTTaGTCCTGGCCAGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QNLRLLYICRQVTFETSGQLCRF*SWPAGL
Trigger: CAGGCCAGCTGGCCAGGAGCAAAATCGGCATAGCTG...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR GCA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGAGCCGTGGCTCCCAGGTaGTCTCTGAGTCTGGATATC +
Preference number: 4 (lower is better)
Translates to: QNLRLLYICRQVTFETSGAVAPR*SLSLDI
Trigger: GATATCCAGACTCAGAGAGCACCTGGGAGCCACGGC...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATCATCCGTGCGGAAGATaGAGAGGTCATATCGGATAC +
Preference number: 4 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYHPCGR*RGHIGY
Trigger: GTATCCGATATGACCTCTGCATCTTCCGCACGGATG...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATAAGACGTTGTACACCTaGAGGTTGGGGTCACAACTG +
Preference number: 4 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYKTLYT*RLGSQL
Trigger: CAGTTGTGACCCCAACCTGCAGGTGTACAACGTCTT...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CCCCTTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCTGCCTGCTCTGGGGTTaGTTCCCCATACCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: PLSFTSTKFLWLGNQLHVCLLWG*FPIPLG
Trigger: CCCCAAAGGTATGGGGAAGCAACCCCAGAGCAGGCA...GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp TTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGGGCCCTCTGATGTCTGCCTaGTCTGGGGTTGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: FLSLVQSFCGWGTSFMSGPLMSA*SGVASP
Trigger: TGGGGAAGCAACCCCAGAGCAGGCAGACATCAGAGG...GCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CCCCTTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCCCTCTGATGTCTGCCTaGTCTGGGGTTGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PLSFTSTKFLWLGNQLHVPLMSA*SGVASP
Trigger: TGGGGAAGCAACCCCAGAGCAGGCAGACATCAGAGG...GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGACTTGCAACACACGCTaGAGCCTTTTAAATTTTCCG +
Preference number: 4 (lower is better)
Translates to: PTSLPVACGHPLLRYAALTCNTR*SLLNFP
Trigger: CGGAAAATTTAAAAGGCTGCAGCGTGTGTTGCAAGT...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376687.4
CDS-3UTR GCA 90 bp CAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCGATTCCAAGAAGACTTaGAACACACGCTGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: QICSPEEETLQLLGPTLPDSKKT*NTRCSL
Trigger: AAGGCTGCAGCGTGTGTTGCAAGTCTTCTTGGAATC...GGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376687.4
CDS-3UTR CCA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGACAGCCAGGCCAAAGTTaGAGTCCATGCGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: QNLRLLYICRQVTFETSGQPGQS*SPCGCS
Trigger: AGAGCACCCGCATGGACTCCAACTTTGGCCTGGCTG...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATAATATATTCTGGGGCTaGGTTGGGACTCACCCCTTG +
Preference number: 4 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYNIFWG*VGTHPL
Trigger: CAAGGGGTGAGTCCCAACCCAGCCCCAGAATATATT...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGACTGCTCAGTGGCCCATaGACACCCACTTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QNLRLLYICRQVTFETSGLLSGP*TPTSLP
Trigger: TGGAAGGGAAGTGGGTGTCCATGGGCCACTGAGCAG...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CACACAGACAGACACATAGATCTGGCATCTGATAGCAGGGCATACAGTCTCATGTTGCCTTCTGCCACATaGGCCCTTTCCTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: HTDRHIDLASDSRAYSLMLPSAT*ALSWHP
Trigger: TGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAA...CATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTATGTGTCTGTCTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR CAA 72 bp GACCCCCTTTCTTTCACTAGTACAAAGTTTCTGTGGTaGGGGAACCAGCTTCATGTCGGGCTAGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: DPLSFTSTKFLW*GNQLHVGLGTL
Trigger: CAGAGTGCCTAGCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAAGGGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp CCCCTTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCCAACACGGTACTCATTaGTGTACACGAAGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: PLSFTSTKFLWLGNQLHVQHGTH*CTRRPA
Trigger: CGCGGGCCTTCGTGTACATCAATGAGTACCGTGTTG...GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATCTCCTTAATAGGCCATaGATCCCAACGACAGAGAGT +
Preference number: 4 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYLLNRP*IPTTES
Trigger: ACTCTCTGTCGTTGGGATTCATGGCCTATTAAGGAG...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp TCCTTAATAGGCCATGAATCCCAACGACAGAGAGTCTTGATGTTGAAAAACTATGAATCTTCTCCAGGGTaGGGACGCCCCAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: SLIGHESQRQRVLMLKNYESSPG*GRPSHA
Trigger: GGCGTGGCTGGGGCGTCCGCACCCTGGAGAAGATTC...ATAGTTTTTCAACATCAAGACTCTCTGTCGTTGGGATTCATGGCCTATTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGATCTTGGCCTGTACTTTaGCTTCTGCCACATGGGCCC +
Preference number: 4 (lower is better)
Translates to: QNLRLLYICRQVTFETSGSWPVL*LLPHGP
Trigger: GGGCCCATGTGGCAGAAGGCAAAGTACAGGCCAAGA...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CCCCTTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCTCTTGGCCTGTACTTTaGCTTCTGCCACATGGGCCC +
Preference number: 4 (lower is better)
Translates to: PLSFTSTKFLWLGNQLHVSWPVL*LLPHGP
Trigger: GGGCCCATGTGGCAGAAGGCAAAGTACAGGCCAAGA...GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CACACAGACAGACACATAGATCTGGCATCTGATAGCAGGGCATACAGTCTCATGACCAGATTCAGTCCATaGCTGGAGGTTAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: HTDRHIDLASDSRAYSLMTRFSP*LEVSLG
Trigger: CCCCAGACTAACCTCCAGGCATGGACTGAATCTGGT...CATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTATGTGTCTGTCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp TTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGGGCATGCCCACTCCAGGCTaGATAGGGTTGAGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: FLSLVQSFCGWGTSFMSGMPTPG*IGLRGV
Trigger: TACACCCCTCAACCCTATGCAGCCTGGAGTGGGCAT...GCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCCTTTCTAAGTCCTTGTaGAACTGCTTGAGGATACGC +
Preference number: 4 (lower is better)
Translates to: QICSPEEETLQLLGPTLPLSKSL*NCLRIR
Trigger: GCGTATCCTCAAGCAGTTCCACAAGGACTTAGAAAG...GGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp TTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGGGCCTGTACCACACGATTTaGGCAGTCATAGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: FLSLVQSFCGWGTSFMSGLYHTI*AVIAAA
Trigger: CGCTGCGGCTATGACTGCCCAAATCGTGTGGTACAG...GCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGTCAAAGAGGTAGGTaGCGCCCTGACGGTCGTAGA +
Preference number: 4 (lower is better)
Translates to: HQNLRLLYICRQVTFETSGQRGR*RPDGRR
Trigger: TCTACGACCGTCAGGGCGCCACCTACCTCTTTGACC...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATATTTCTGAAGGTGGGTaGGGGTTTGTAAGTGCAACC +
Preference number: 4 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYISEGG*GFVSAT
Trigger: GGTTGCACTTACAAACCCCCACCCACCTTCAGAAAT...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CCCCTTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCCATGTAGGGGCACTCTaGGCACAGGTAGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PLSFTSTKFLWLGNQLHVHVGAL*AQVVRK
Trigger: CTTCCTGACTACCTGTGCCCAGAGTGCCCCTACATG...GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGGGCCTCCCACGTACTCCATaGCGAAGCTGTTCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: FLSLVQSFCGWGTSFMSGLPRTP*RSCSCE
Trigger: TTCGCAAGAACAGCTTCGTCATGGAGTACGTGGGAG...GCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp CACACAGACAGACACATAGATCTGGCATCTGATAGCAGGGCATACAGTCTCATGGGTCACAACTGTGGTTaGCAAAGTGGGAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: HTDRHIDLASDSRAYSLMGHNCG*QSGRCC
Trigger: GCAACATCTCCCACTTTGTCAACCACAGTTGTGACC...CATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTATGTGTCTGTCTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATACATTTGTAGGCAGGTaGCTTTTGAGACCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYTFVGR*LLRPVE
Trigger: TTCCACTGGTCTCAAAAGTCACCTGCCTACAAATGT...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTACTTGCAACACACGCTaGAGCCTGTCAGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: HQNLRLLYICRQVTFETSTCNTR*SLSVGQ
Trigger: CTGACCCACTGACAGGCTGCAGCGTGTGTTGCAAGT...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR GCA 90 bp CACACAGACAGACACATAGATCTGGCATCTGATAGCAGGGCATACAGTCTCATGACTCAGTCCCACACTTaGATTCAATACGGACCCGCT +
Preference number: 4 (lower is better)
Translates to: HTDRHIDLASDSRAYSLMTQSHT*IQYGPA
Trigger: AGCGGGTCCGTATTGAATGCAAGTGTGGGACTGAGT...CATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTATGTGTCTGTCTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CACACAGACAGACACATAGATCTGGCATCTGATAGCAGGGCATACAGTCTCATGAATATATTCTGGGGCTaGGTTGGGACTCACCCCTTG +
Preference number: 4 (lower is better)
Translates to: HTDRHIDLASDSRAYSLMNIFWG*VGTHPL
Trigger: CAAGGGGTGAGTCCCAACCCAGCCCCAGAATATATT...CATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTATGTGTCTGTCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR CAA 72 bp AGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTaGTACATTTGTAGGCAGGTGACTTTTGAGACCAGT +
Preference number: 4 (lower is better)
Translates to: SKEQGSHQNLRL*YICRQVTFETS
Trigger: ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
3UTR CAA 72 bp TTCATTTTATTGATGCCCACTCCAGGCTGCATAGGGTaGAGGGGTGTACAAGAGGAGAACCAGATTCAGTCC +
Preference number: 4 (lower is better)
Translates to: FILLMPTPGCIG*RGVQEENQIQS
Trigger: GGACTGAATCTGGTTCTCCTCTTGTACACCCCTCAACCCTATGCAGCCTGGAGTGGGCATCAATAAAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp CACACAGACAGACACATAGATCTGGCATCTGATAGCAGGGCATACAGTCTCATGCTCCTTAATAGGCCATaGATCCCAACGACAGAGAGT +
Preference number: 4 (lower is better)
Translates to: HTDRHIDLASDSRAYSLMLLNRP*IPTTES
Trigger: ACTCTCTGTCGTTGGGATTCATGGCCTATTAAGGAG...CATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTATGTGTCTGTCTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGGGCTTTTCAAGGCTTCCCTaGGACAATCCACGTGGACCA +
Preference number: 4 (lower is better)
Translates to: FLSLVQSFCGWGTSFMSGFSRLP*DNPRGP
Trigger: TGGTCCACGTGGATTGTCTCAGGGAAGCCTTGAAAA...GCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp CACACAGACAGACACATAGATCTGGCATCTGATAGCAGGGCATACAGTCTCATGGACAGTTCATTTTATTaGTGCCCACTCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: HTDRHIDLASDSRAYSLMDSSFY*CPLQAA
Trigger: TGCAGCCTGGAGTGGGCATCAATAAAATGAACTGTC...CATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTATGTGTCTGTCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGACAAAGTGGGAGATGTTaGCATAGTAGGCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: QNLRLLYICRQVTFETSGQSGRC*HSRRHP
Trigger: TGGATGCCGCCTACTATGGCAACATCTCCCACTTTG...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CCCCTTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCTTGGGACTCACCCCTTaGACCTCCTTAATAGGCCAT +
Preference number: 4 (lower is better)
Translates to: PLSFTSTKFLWLGNQLHVLGLTP*TSLIGH
Trigger: ATGGCCTATTAAGGAGGTCCAAGGGGTGAGTCCCAA...GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp TTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGGGCTTGGGACTCACCCCTTaGACCTCCTTAATAGGCCAT +
Preference number: 4 (lower is better)
Translates to: FLSLVQSFCGWGTSFMSGLGLTP*TSLIGH
Trigger: ATGGCCTATTAAGGAGGTCCAAGGGGTGAGTCCCAA...GCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGACGTCAAGGTTGTCTATaGAGACGTTGTACACCTGCA +
Preference number: 4 (lower is better)
Translates to: QNLRLLYICRQVTFETSGRQGCL*RRCTPA
Trigger: TGCAGGTGTACAACGTCTTCATAGACAACCTTGACG...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTAAGACGTTGTACACCTaGAGGTTGGGGTCACAACTG +
Preference number: 4 (lower is better)
Translates to: HQNLRLLYICRQVTFETSKTLYT*RLGSQL
Trigger: CAGTTGTGACCCCAACCTGCAGGTGTACAACGTCTT...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp TCCTTAATAGGCCATGAATCCCAACGACAGAGAGTCTTGATGTTGAAAAACTATTGGCCAGCTCTGCACTaGCTTCCTCTCACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLIGHESQRQRVLMLKNYWPALH*LPLTAQ
Trigger: CTGAGCAGTGAGAGGAAGGCAGTGCAGAGCTGGCCA...ATAGTTTTTCAACATCAAGACTCTCTGTCGTTGGGATTCATGGCCTATTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CACACAGACAGACACATAGATCTGGCATCTGATAGCAGGGCATACAGTCTCATGCTTTCTAAGTCCTTGTaGAACTGCTTGAGGATACGC +
Preference number: 4 (lower is better)
Translates to: HTDRHIDLASDSRAYSLMLSKSL*NCLRIR
Trigger: GCGTATCCTCAAGCAGTTCCACAAGGACTTAGAAAG...CATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTATGTGTCTGTCTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TCCTTAATAGGCCATGAATCCCAACGACAGAGAGTCTTGATGTTGAAAAACTATTCTTGGTTCCAGCTCTaGGTGGTGTCAGCGGTCATG +
Preference number: 4 (lower is better)
Translates to: SLIGHESQRQRVLMLKNYSWFQL*VVSAVM
Trigger: CATGACCGCTGACACCACTCAGAGCTGGAACCAAGA...ATAGTTTTTCAACATCAAGACTCTCTGTCGTTGGGATTCATGGCCTATTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGAACATTTGTAGGCAGGTaGCTTTTGAGACCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QNLRLLYICRQVTFETSGTFVGR*LLRPVE
Trigger: TTCCACTGGTCTCAAAAGTCACCTGCCTACAAATGT...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CACACAGACAGACACATAGATCTGGCATCTGATAGCAGGGCATACAGTCTCATGAGTACAAAGTTTCTGTaGTTGGGGAACCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: HTDRHIDLASDSRAYSLMSTKFL*LGNQLH
Trigger: ATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACT...CATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTATGTGTCTGTCTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp TCCTTAATAGGCCATGAATCCCAACGACAGAGAGTCTTGATGTTGAAAAACTATTTGCCTTCTGCCACATaGGCCCTTTCCTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: SLIGHESQRQRVLMLKNYLPSAT*ALSWHP
Trigger: TGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAA...ATAGTTTTTCAACATCAAGACTCTCTGTCGTTGGGATTCATGGCCTATTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp TCCTTAATAGGCCATGAATCCCAACGACAGAGAGTCTTGATGTTGAAAAACTATCATGTAGGGGCACTCTaGGCACAGGTAGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLIGHESQRQRVLMLKNYHVGAL*AQVVRK
Trigger: CTTCCTGACTACCTGTGCCCAGAGTGCCCCTACATG...ATAGTTTTTCAACATCAAGACTCTCTGTCGTTGGGATTCATGGCCTATTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGATTGAAAAACTATTTCTaGAGGTGGGTGGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: QNLRLLYICRQVTFETSGLKNYF*RWVGVC
Trigger: ACAAACCCCCACCCACCTTCAGAAATAGTTTTTCAA...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR GCA 90 bp TCCTTAATAGGCCATGAATCCCAACGACAGAGAGTCTTGATGTTGAAAAACTATCAAAGTTGGAGTCCATaGGGGTGCTCTCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: SLIGHESQRQRVLMLKNYQSWSP*GCSPCP
Trigger: TGGACATGGAGAGCACCCGCATGGACTCCAACTTTG...ATAGTTTTTCAACATCAAGACTCTCTGTCGTTGGGATTCATGGCCTATTAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTAAAACAAATATATTCTaGGGCTGGGTTGGGACTCAC +
Preference number: 4 (lower is better)
Translates to: HQNLRLLYICRQVTFETSKTNIF*GWVGTH
Trigger: GTGAGTCCCAACCCAGCCCCAGAATATATTTGTTTT...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR TCA 90 bp TCCTTAATAGGCCATGAATCCCAACGACAGAGAGTCTTGATGTTGAAAAACTATGACAGTTCATTTTATTaGTGCCCACTCCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLIGHESQRQRVLMLKNYDSSFY*CPLQAA
Trigger: TGCAGCCTGGAGTGGGCATCAATAAAATGAACTGTC...ATAGTTTTTCAACATCAAGACTCTCTGTCGTTGGGATTCATGGCCTATTAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CCA 90 bp TCCTTAATAGGCCATGAATCCCAACGACAGAGAGTCTTGATGTTGAAAAACTATTTGGGGTCACAACTGTaGTTGACAAAGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SLIGHESQRQRVLMLKNYLGSQL*LTKWEM
Trigger: CATCTCCCACTTTGTCAACCACAGTTGTGACCCCAA...ATAGTTTTTCAACATCAAGACTCTCTGTCGTTGGGATTCATGGCCTATTAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CCA 90 bp GACGCCCCCGGGCAGCAGCCTCCAGTGGGTGCCCACAGACAGTCCTaGCACTCGCAGCCCACAGCCACCTGGTTGAGGGTGATGCCCTCA +
Preference number: 5 (lower is better)
Translates to: DAPGQQPPVGAHRQS*HSQPTATWLRVMPS
Trigger: TGAGGGCATCACCCTCAACCAGGTGGCTGTGGGCTGCGAGTGCCAGGACTGTCTGTGGGCACCCACTGGAGGCTGCTGCCCGGGGGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp AAGGGGACTCCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGCAGGGCAGGAGAGCTaGGCCAGGCGGCACAGGTCC +
Preference number: 5 (lower is better)
Translates to: KGTPGVGPHHGHSPERRAAGQES*ARRHRS
Trigger: GGACCTGTGCCGCCTGGCCAAGCTCTCCTGCCCTGC...TGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGGAGTCCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS GCA 90 bp GTACCACACGATTTGGGCAGTCATAGCCGCAGCGGCAGCGGGAGTTaGACTCGTAGATGGGCAGCCCGGCTCGAAGCCGCACCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: VPHDLGSHSRSGSGS*TRRWAARLEAAPGP
Trigger: AGGGCCAGGTGCGGCTTCGAGCCGGGCTGCCCATCTACGAGTGCAACTCCCGCTGCCGCTGCGGCTATGACTGCCCAAATCGTGTGGTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CCA 90 bp TTGGGCAGTCATAGCCGCAGCGGCAGCGGGAGTTGCACTCGTAGATaGGCAGCCCGGCTCGAAGCCGCACCTGGCCCTGGTCATTGTAGG +
Preference number: 5 (lower is better)
Translates to: LGSHSRSGSGSCTRR*AARLEAAPGPGHCR
Trigger: CCTACAATGACCAGGGCCAGGTGCGGCTTCGAGCCGGGCTGCCCATCTACGAGTGCAACTCCCGCTGCCGCTGCGGCTATGACTGCCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS TCA 90 bp TCGAAGCCGCACCTGGCCCTGGTCATTGTAGGCAAACTTGTGCAGTaGCGCCCCCGGGCAGCAGCCTCCAGTGGGTGCCCACAGACAGTC +
Preference number: 5 (lower is better)
Translates to: SKPHLALVIVGKLVQ*RPRAAASSGCPQTV
Trigger: GACTGTCTGTGGGCACCCACTGGAGGCTGCTGCCCGGGGGCGTCACTGCACAAGTTTGCCTACAATGACCAGGGCCAGGTGCGGCTTCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS GCA 90 bp TCTACAGTGATGCGTCCCAGATGGCTGCGCTTGGCATTGAGCTCCTaGTCCCAGCGACGGAGCGCCCGCCTCTGCTTGGCCTTCTGCACC +
Preference number: 5 (lower is better)
Translates to: STVMRPRWLRLALSS*SQRRSARLCLAFCT
Trigger: GGTGCAGAAGGCCAAGCAGAGGCGGGCGCTCCGTCGCTGGGAGCAGGAGCTCAATGCCAAGCGCAGCCATCTGGGACGCATCACTGTAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CCA 90 bp GGGCCGTCCAGGTCCACCTCATTCTCTACAGTGATGCGTCCCAGATaGCTGCGCTTGGCATTGAGCTCCTGCTCCCAGCGACGGAGCGCC +
Preference number: 5 (lower is better)
Translates to: GPSRSTSFSTVMRPR*LRLALSSCSQRRSA
Trigger: GGCGCTCCGTCGCTGGGAGCAGGAGCTCAATGCCAAGCGCAGCCATCTGGGACGCATCACTGTAGAGAATGAGGTGGACCTGGACGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CCA 90 bp CCACGGTGTACACGTCCTCCACGTAGTCCAGGTCAAAGAGGTAGGTaGCGCCCTGACGGTCGTAGATCTGGCCCCGCCGCTCTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: PRCTRPPRSPGQRGR*RPDGRRSGPAALPP
Trigger: AGGAGGCAGAGCGGCGGGGCCAGATCTACGACCGTCAGGGCGCCACCTACCTCTTTGACCTGGACTACGTGGAGGACGTGTACACCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337852.10
ENST00000376687.4
ENST00000482260.1
CDS-3UTR CAA 90 bp GCAGCAGTGGGGGAGGTGCATGTAGCTTCAGGCCCCCTCAGTCAGTCTGGCCTCCCCAGATGGCTGCGCTaGGCATTGAGCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: AAVGEVHVASGPLSQSGLPRWLR*ALSSCS
Trigger: GGAGCAGGAGCTCAATGCCAAGCGCAGCCATCTGGG...GAGGCCAGACTGACTGAGGGGGCCTGAAGCTACATGCACCTCCCCCACTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS TCA 90 bp CCTCTCGACCCCTTGCCCGCCTGCCGGGGGTACCCACACTGTGGTTaGCAAAGTGGGAGATGTTGCCATAGTAGGCGGCATCCACGGTGT +
Preference number: 5 (lower is better)
Translates to: PLDPLPACRGYPHCG*QSGRCCHSRRHPRC
Trigger: ACACCGTGGATGCCGCCTACTATGGCAACATCTCCCACTTTGTCAACCACAGTGTGGGTACCCCCGGCAGGCGGGCAAGGGGTCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462786.1
CDS GCA 90 bp CCAGGGTGCGGACGCCCCAGCCACGCCCATCATCCGTGCGGAAGATaGAGAGGTCATATCGGATACCCTTCTGTACCACACGATTTGGGC +
Preference number: 5 (lower is better)
Translates to: PGCGRPSHAHHPCGR*RGHIGYPSVPHDLG
Trigger: GCCCAAATCGTGTGGTACAGAAGGGTATCCGATATGACCTCTGCATCTTCCGCACGGATGATGGGCGTGGCTGGGGCGTCCGCACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCGCAGGGCAGGAGAGCTaGGCCAGGCGGCACAGGTCC +
Preference number: 5 (lower is better)
Translates to: QICSPEEETLQLLGPTLPAGQES*ARRHRS
Trigger: GGACCTGTGCCGCCTGGCCAAGCTCTCCTGCCCTGC...GGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp GGGAGGAGGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACCAGCCAGGCCAAAGTaGGAGTCCATGCGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: GRRPAADPSISRQKQVQKPARPK*ESMRVL
Trigger: GAGCACCCGCATGGACTCCAACTTTGGCCTGGCTGG...TTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCCTCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGGTAGGAGCCCCCACCCCCAATTCTaGGCCTGTACTTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: PGVGPHHGHSPERRAGRSPHPQF*ACTLPS
Trigger: AGAAGGCAAAGTACAGGCCAAGAATTGGGGGTGGGG...GCTCCTACCTGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS GCA 90 bp GGGAGCCAGGGAGCCCAGCCAGGCCAAAGTTGGAGTCCATGCGGGTaGTCTCCATGTCCACGGGGTCCACTTGCATGTTGTAATCAAAGG +
Preference number: 5 (lower is better)
Translates to: GSQGAQPGQSWSPCG*SPCPRGPLACCNQR
Trigger: CCTTTGATTACAACATGCAAGTGGACCCCGTGGACATGGAGAGCACCCGCATGGACTCCAACTTTGGCCTGGCTGGGCTCCCTGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337852.10
ENST00000376687.4
ENST00000462786.1
ENST00000482260.1
CDS-3UTR CAA 90 bp AAGGGGACTCCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCACCAACACGGTACTCATaGATGTACACGAAGGCCCGC +
Preference number: 5 (lower is better)
Translates to: KGTPGVGPHHGHSPERRAPTRYS*MYTKAR
Trigger: GCGGGCCTTCGTGTACATCAATGAGTACCGTGTTGG...TGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGGAGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp TGGGAATGGCAGGCAGCAAGGGCTTCCCTCTCGCCTCGTCATCCCATAGTGGGGGTTGGGACTCACCCCTaGGACCTCCTTAATAGGCCA +
Preference number: 5 (lower is better)
Translates to: WEWQAARASLSPRHPIVGVGTHP*DLLNRP
Trigger: TGGCCTATTAAGGAGGTCCAAGGGGTGAGTCCCAAC...CCCCACTATGGGATGACGAGGCGAGAGGGAAGCCCTTGCTGCCTGCCATTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS GCA 90 bp CGGTGGTGCCGCCGGAGCAGCTCCCTTTCTAAGTCCTTGTGGAACTaGTTGAGGATACGCACACACTTGAGATTCTGCCGTGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: RWCRRSSSLSKSLWN*LRIRTHLRFCRGSQ
Trigger: CTGGGAGCCACGGCAGAATCTCAAGTGTGTGCGTATCCTCAAGCAGTTCCACAAGGACTTAGAAAGGGAGCTGCTCCGGCGGCACCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS GCA 90 bp GAATCTTCTCCAGGGTGCGGACGCCCCAGCCACGCCCATCATCCGTaGGGAAGATGCAGAGGTCATATCGGATACCCTTCTGTACCACAC +
Preference number: 5 (lower is better)
Translates to: ESSPGCGRPSHAHHP*GRCRGHIGYPSVPH
Trigger: GTGTGGTACAGAAGGGTATCCGATATGACCTCTGCATCTTCCGCACGGATGATGGGCGTGGCTGGGGCGTCCGCACCCTGGAGAAGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp GGGAGGAGGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACCAGGCTGCATAGGGTaGAGGGGTGTACAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: GRRPAADPSISRQKQVQKPGCIG*RGVQEE
Trigger: CTCCTCTTGTACACCCCTCAACCCTATGCAGCCTGG...TTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCCTCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGACAGCTATGCCGATTTaGCTCCTGGCCAGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: PTSLPVACGHPLLRYAALTAMPI*LLASWP
Trigger: AGGCCAGCTGGCCAGGAGCAAAATCGGCATAGCTGT...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR CAA 90 bp CAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCCCCAGATGGCTGCGCTaGGCATTGAGCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QICSPEEETLQLLGPTLPPRWLR*ALSSCS
Trigger: GGAGCAGGAGCTCAATGCCAAGCGCAGCCATCTGGG...GGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp TGGGAATGGCAGGCAGCAAGGGCTTCCCTCTCGCCTCGTCATCCCATAGTGGGGGGGTCACAACTGTGGTaGACAAAGTGGGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: WEWQAARASLSPRHPIVGGSQLW*TKWEML
Trigger: CAACATCTCCCACTTTGTCAACCACAGTTGTGACCC...CCCCACTATGGGATGACGAGGCGAGAGGGAAGCCCTTGCTGCCTGCCATTCCCA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp TGGGAATGGCAGGCAGCAAGGGCTTCCCTCTCGCCTCGTCATCCCATAGTGGGGGTCCACGGGGTCCACTaGCATGTTGTAATCAAAGGT +
Preference number: 5 (lower is better)
Translates to: WEWQAARASLSPRHPIVGVHGVH*HVVIKG
Trigger: ACCTTTGATTACAACATGCAAGTGGACCCCGTGGAC...CCCCACTATGGGATGACGAGGCGAGAGGGAAGCCCTTGCTGCCTGCCATTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CCTGGAGTCGGTCCTCACCACGGCCACAGCCCTGAACGTAGAGCAGGTAGGAGCACAAAGTTTCTGTGGTaGGGGAACCAGCTTCATGTC +
Preference number: 5 (lower is better)
Translates to: PGVGPHHGHSPERRAGRSTKFLW*GNQLHV
Trigger: GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGT...GCTCCTACCTGCTCTACGTTCAGGGCTGTGGCCGTGGTGAGGACCGACTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp GCAGCAGTGGGGGAGGTGCATGTAGCTTCAGGCCCCCTCAGTCAGTCTGGCCTCCAGAACCTTCGCCTTTaGTACATTTGTAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: AAVGEVHVASGPLSQSGLQNLRL*YICRQV
Trigger: CACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG...GAGGCCAGACTGACTGAGGGGGCCTGAAGCTACATGCACCTCCCCCACTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS TCA 90 bp TGGCAAAGAAAGCGATGCGGGGCAGCCGCTCGTCAAGGTTGTCTATaGAGACGTTGTACACCTGCAGGTTGGGGTCACACTGGGCGAGAA +
Preference number: 5 (lower is better)
Translates to: WQRKRCGAAARQGCL*RRCTPAGWGHTGRE
Trigger: TTCTCGCCCAGTGTGACCCCAACCTGCAGGTGTACAACGTCTTCATAGACAACCTTGACGAGCGGCTGCCCCGCATCGCTTTCTTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462786.1
CDS GCA 90 bp CGGGGCAGCCGCTCGTCAAGGTTGTCTATGAAGACGTTGTACACCTaGAGGTTGGGGTCACACTGGGCGAGAAAGAACAGTTGGGAGAGT +
Preference number: 5 (lower is better)
Translates to: RGSRSSRLSMKTLYT*RLGSHWARKNSWES
Trigger: ACTCTCCCAACTGTTCTTTCTCGCCCAGTGTGACCCCAACCTGCAGGTGTACAACGTCTTCATAGACAACCTTGACGAGCGGCTGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462786.1
CDS CCA 90 bp CAGCCATCGAGTCAGACAGCTATGCCGATTTTGCTCCTGGCCAGCTaGCCTGTGACTCGTTCAATCCGCCCCTCATCACATCGTCAGTCA +
Preference number: 5 (lower is better)
Translates to: QPSSQTAMPILLLAS*PVTRSIRPSSHRQS
Trigger: TGACTGACGATGTGATGAGGGGCGGATTGAACGAGTCACAGGCCAGCTGGCCAGGAGCAAAATCGGCATAGCTGTCTGACTCGATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS CCA 90 bp TTTGACCGGTGGTGCCGCCGGAGCAGCTCCCTTTCTAAGTCCTTGTaGAACTGCTTGAGGATACGCACACACTTGAGATTCTGCCGTGGC +
Preference number: 5 (lower is better)
Translates to: FDRWCRRSSSLSKSL*NCLRIRTHLRFCRG
Trigger: GCCACGGCAGAATCTCAAGTGTGTGCGTATCCTCAAGCAGTTCCACAAGGACTTAGAAAGGGAGCTGCTCCGGCGGCACCACCGGTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp GTACCTTCACTGCACTGTGAAGGCAGAGCTTGGTCCCAGCCTACCTCCAGGGCTTTGTACACCTGCAGGTaGGGGTCACAACTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: VPSLHCEGRAWSQPTSRALYTCR*GSQLWL
Trigger: CAACCACAGTTGTGACCCCAACCTGCAGGTGTACAA...AGCCCTGGAGGTAGGCTGGGACCAAGCTCTGCCTTCACAGTGCAGTGAAGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp ATTTCTGAAGGTGGGTGGGGGTTTGTAAGTGCAACCCACAGATGGGGCTGGGACAGGATACGCACACACTaGAGATTCTGCCGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: ISEGGWGFVSATHRWGWDRIRTH*RFCRGS
Trigger: GGAGCCACGGCAGAATCTCAAGTGTGTGCGTATCCT...GTCCCAGCCCCATCTGTGGGTTGCACTTACAAACCCCCACCCACCTTCAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp ATTTCTGAAGGTGGGTGGGGGTTTGTAAGTGCAACCCACAGATGGGGCTGGGACTCTGTACCACACGATTaGGGCAGTCATAGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: ISEGGWGFVSATHRWGWDSVPHD*GSHSRS
Trigger: GCTGCGGCTATGACTGCCCAAATCGTGTGGTACAGA...GTCCCAGCCCCATCTGTGGGTTGCACTTACAAACCCCCACCCACCTTCAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp GGGAGGAGGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAAATGACGAAGCTGTTCTaGCGAATCTTCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GRRPAADPSISRQKQVQKMTKLF*RIFSRV
Trigger: CACCCTGGAGAAGATTCGCAAGAACAGCTTCGTCAT...TTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCCTCCTCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp GTACCTTCACTGCACTGTGAAGGCAGAGCTTGGTCCCAGCCTACCTCCAGGGCTAGCCGCTCGTCAAGGTaGTCTATGAAGACGTTGTAC +
Preference number: 5 (lower is better)
Translates to: VPSLHCEGRAWSQPTSRASRSSR*SMKTLY
Trigger: GTACAACGTCTTCATAGACAACCTTGACGAGCGGCT...AGCCCTGGAGGTAGGCTGGGACCAAGCTCTGCCTTCACAGTGCAGTGAAGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp TACTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCCTGCCCGGATGGTTCTaGTGGCAAAGAAAGCGATGC +
Preference number: 5 (lower is better)
Translates to: YFAFCHMGPFLASTSVVFLPGWF*WQRKRC
Trigger: GCATCGCTTTCTTTGCCACAAGAACCATCCGGGCAG...GAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp TACTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCTTCTTGGCCTGTACTTaGCCTTCTGCCACATGGGCC +
Preference number: 5 (lower is better)
Translates to: YFAFCHMGPFLASTSVVFFLACT*PSATWA
Trigger: GGCCCATGTGGCAGAAGGCAAAGTACAGGCCAAGAA...GAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CCA 90 bp GAAGATGCAGAGGTCATATCGGATACCCTTCTGTACCACACGATTTaGGCAGTCATAGCCGCAGCGGCAGCGGGAGTTGCACTCGTAGAT +
Preference number: 5 (lower is better)
Translates to: EDAEVISDTLLYHTI*AVIAAAAAGVALVD
Trigger: ATCTACGAGTGCAACTCCCGCTGCCGCTGCGGCTATGACTGCCCAAATCGTGTGGTACAGAAGGGTATCCGATATGACCTCTGCATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGATGACGAAGCTGTTCTaGCGAATCTTCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: PTSLPVACGHPLLRYAALMTKLF*RIFSRV
Trigger: CACCCTGGAGAAGATTCGCAAGAACAGCTTCGTCAT...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp ATTTCTGAAGGTGGGTGGGGGTTTGTAAGTGCAACCCACAGATGGGGCTGGGACTTGTACACCTGCAGGTaGGGGTCACAACTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: ISEGGWGFVSATHRWGWDLYTCR*GSQLWL
Trigger: CAACCACAGTTGTGACCCCAACCTGCAGGTGTACAA...GTCCCAGCCCCATCTGTGGGTTGCACTTACAAACCCCCACCCACCTTCAGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CCCACTTCCCTTCCAGTGGCATGTGGGCATCCACTTCTCAGATATGCAGCCCTGTTGTCTATGAAGACGTaGTACACCTGCAGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: PTSLPVACGHPLLRYAALLSMKT*YTCRLG
Trigger: CCCCAACCTGCAGGTGTACAACGTCTTCATAGACAA...CAGGGCTGCATATCTGAGAAGTGGATGCCCACATGCCACTGGAAGGGAAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCCTGCCCGGATGGTTCTaGTGGCAAAGAAAGCGATGC +
Preference number: 5 (lower is better)
Translates to: QICSPEEETLQLLGPTLPLPGWF*WQRKRC
Trigger: GCATCGCTTTCTTTGCCACAAGAACCATCCGGGCAG...GGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGGTTGGGACTCACCCCTaGGACCTCCTTAATAGGCCA +
Preference number: 5 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLVGTHP*DLLNRP
Trigger: TGGCCTATTAAGGAGGTCCAAGGGGTGAGTCCCAAC...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS GCA 90 bp AAGTCCTTGTGGAACTGCTTGAGGATACGCACACACTTGAGATTCTaGCGTGGCTCCCAGGTGCTCTCTGAGTCTGGATATCCACGCCAT +
Preference number: 5 (lower is better)
Translates to: KSLWNCLRIRTHLRF*RGSQVLSESGYPRH
Trigger: ATGGCGTGGATATCCAGACTCAGAGAGCACCTGGGAGCCACGGCAGAATCTCAAGTGTGTGCGTATCCTCAAGCAGTTCCACAAGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGACCAGCCAGGCCAAAGTaGGAGTCCATGCGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: QNLRLLYICRQVTFETSGPARPK*ESMRVL
Trigger: GAGCACCCGCATGGACTCCAACTTTGGCCTGGCTGG...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATGACTCAGTCCCACACTaGCATTCAATACGGACCCGC +
Preference number: 5 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYDSVPH*HSIRTR
Trigger: GCGGGTCCGTATTGAATGCAAGTGTGGGACTGAGTC...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp TCTCAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTAAGGATACGCACACACTaGAGATTCTGCCGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: SQICSPEEETLQLLGPTLRIRTH*RFCRGS
Trigger: GGAGCCACGGCAGAATCTCAAGTGTGTGCGTATCCT...TAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp GTGGGGGAGCAAGGAGCAAGGCAGCCATCAGAACCTTCGCCTTTTGTACATTTGGGGTCACAACTGTGGTaGACAAAGTGGGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: VGEQGARQPSEPSPFVHLGSQLW*TKWEML
Trigger: CAACATCTCCCACTTTGTCAACCACAGTTGTGACCC...CAAATGTACAAAAGGCGAAGGTTCTGATGGCTGCCTTGCTCCTTGCTCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCTTGTCTATGAAGACGTaGTACACCTGCAGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: QICSPEEETLQLLGPTLPLSMKT*YTCRLG
Trigger: CCCCAACCTGCAGGTGTACAACGTCTTCATAGACAA...GGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp TACTTTGCCTTCTGCCACATGGGCCCTTTCCTGGCATCCACCTCCGTGGTTTTCACAAAGTTTCTGTGGTaGGGGAACCAGCTTCATGTC +
Preference number: 5 (lower is better)
Translates to: YFAFCHMGPFLASTSVVFTKFLW*GNQLHV
Trigger: GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGT...GAAAACCACGGAGGTGGATGCCAGGAAAGGGCCCATGTGGCAGAAGGCAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS TCA 90 bp TTTCTCAGGCGACTCATCCCCACCATTGGTCAAGTCAGTCTCCTCTaGTGCGTTGAAGCTGAGATTCTATCAGGGCAGACAGTCCGTAAC +
Preference number: 5 (lower is better)
Translates to: FLRRLIPTIGQVSLL*CVEAEILSGQTVRN
Trigger: GTTACGGACTGTCTGCCCTGATAGAATCTCAGCTTCAACGCATCAGAGGAGACTGACTTGACCAATGGTGGGGATGAGTCGCCTGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS TCA 90 bp GATACGCACACACTTGAGATTCTGCCGTGGCTCCCAGGTGCTCTCTaGGTCTGGATATCCACGCCATTTCACCAGGTAATATTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: DTHTLEILPWLPGAL*VWISTPFHQVIFLF
Trigger: GAACAGGAATATTACCTGGTGAAATGGCGTGGATATCCAGACTCAGAGAGCACCTGGGAGCCACGGCAGAATCTCAAGTGTGTGCGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATTCCTTGTGGAACTGCTaGAGGATACGCACACACTTG +
Preference number: 5 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYSLWNC*RIRTHL
Trigger: CAAGTGTGTGCGTATCCTCAAGCAGTTCCACAAGGA...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATAGCCGCTCGTCAAGGTaGTCTATGAAGACGTTGTAC +
Preference number: 5 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYSRSSR*SMKTLY
Trigger: GTACAACGTCTTCATAGACAACCTTGACGAGCGGCT...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CACACAGACAGACACATAGATCTGGCATCTGATAGCAGGGCATACAGTCTCATGGACTCAGTCCCACACTaGCATTCAATACGGACCCGC +
Preference number: 5 (lower is better)
Translates to: HTDRHIDLASDSRAYSLMDSVPH*HSIRTR
Trigger: GCGGGTCCGTATTGAATGCAAGTGTGGGACTGAGTC...CATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTATGTGTCTGTCTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CCCCTTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCCCAGGCTGCATAGGGTaGAGGGGTGTACAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: PLSFTSTKFLWLGNQLHVPGCIG*RGVQEE
Trigger: CTCCTCTTGTACACCCCTCAACCCTATGCAGCCTGG...GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp GGCCTGCAGCAGACCCCTCAATCTCCAGGCAGAAGCAGGTGCAAAAACAAATATCGACAGTTCATTTTATaGATGCCCACTCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: GLQQTPQSPGRSRCKNKYRQFIL*MPTPGC
Trigger: GCAGCCTGGAGTGGGCATCAATAAAATGAACTGTCG...ATATTTGTTTTTGCACCTGCTTCTGCCTGGAGATTGAGGGGTCTGCTGCAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CAGATATGCAGCCCTGAAGAAGAGACCCTACAGCTCTTAGGGCCAACACTACCCTCCCTTTCTAAGTCCTaGTGGAACTGCTTGAGGATA +
Preference number: 5 (lower is better)
Translates to: QICSPEEETLQLLGPTLPSLSKS*WNCLRI
Trigger: TATCCTCAAGCAGTTCCACAAGGACTTAGAAAGGGA...GGGTAGTGTTGGCCCTAAGAGCTGTAGGGTCTCTTCTTCAGGGCTGCATATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp TTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGGGCCCAACACGGTACTCATaGATGTACACGAAGGCCCGC +
Preference number: 5 (lower is better)
Translates to: FLSLVQSFCGWGTSFMSGPTRYS*MYTKAR
Trigger: GCGGGCCTTCGTGTACATCAATGAGTACCGTGTTGG...GCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp TCCCTGAGACAATCCACGTGGACCAGGTGCTCTACCCAGTGCCTGGCACCTCATCAACGACAGAGAGTCTaGATGTTGAAAAACTATTTC +
Preference number: 5 (lower is better)
Translates to: SLRQSTWTRCSTQCLAPHQRQRV*MLKNYF
Trigger: GAAATAGTTTTTCAACATCAAGACTCTCTGTCGTTG...ATGAGGTGCCAGGCACTGGGTAGAGCACCTGGTCCACGTGGATTGTCTCAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp TTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGGGCCCCCACCCCCAATTCTaGGCCTGTACTTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: FLSLVQSFCGWGTSFMSGPHPQF*ACTLPS
Trigger: AGAAGGCAAAGTACAGGCCAAGAATTGGGGGTGGGG...GCCCGACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGAGACTCATCCCCACCATaGGTCAAGTCAGTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: QNLRLLYICRQVTFETSGDSSPP*VKSVSS
Trigger: AGAGGAGACTGACTTGACCAATGGTGGGGATGAGTC...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR CAA 90 bp CACACAGACAGACACATAGATCTGGCATCTGATAGCAGGGCATACAGTCTCATGTCCTTGTGGAACTGCTaGAGGATACGCACACACTTG +
Preference number: 5 (lower is better)
Translates to: HTDRHIDLASDSRAYSLMSLWNC*RIRTHL
Trigger: CAAGTGTGTGCGTATCCTCAAGCAGTTCCACAAGGA...CATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTATGTGTCTGTCTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTTCTGTACCACACGATTaGGGCAGTCATAGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: HQNLRLLYICRQVTFETSSVPHD*GSHSRS
Trigger: GCTGCGGCTATGACTGCCCAAATCGTGTGGTACAGA...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTTTCTTGGCCTGTACTTaGCCTTCTGCCACATGGGCC +
Preference number: 5 (lower is better)
Translates to: HQNLRLLYICRQVTFETSFLACT*PSATWA
Trigger: GGCCCATGTGGCAGAAGGCAAAGTACAGGCCAAGAA...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTGGAGTCCACGGGGTCCACTaGCATGTTGTAATCAAAGGT +
Preference number: 5 (lower is better)
Translates to: QNLRLLYICRQVTFETSGVHGVH*HVVIKG
Trigger: ACCTTTGATTACAACATGCAAGTGGACCCCGTGGAC...TCCACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CCCCTTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCCGACAGTTCATTTTATaGATGCCCACTCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: PLSFTSTKFLWLGNQLHVRQFIL*MPTPGC
Trigger: GCAGCCTGGAGTGGGCATCAATAAAATGAACTGTCG...GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CCCCTTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCGTCTCCTCTGATGCGTaGAAGCTGAGATTCTATCAG +
Preference number: 5 (lower is better)
Translates to: PLSFTSTKFLWLGNQLHVVSSDA*KLRFYQ
Trigger: CTGATAGAATCTCAGCTTCAACGCATCAGAGGAGAC...GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS-3UTR CAA 90 bp CCCCTTTCTTTCACTAGTACAAAGTTTCTGTGGTTGGGGAACCAGCTTCATGTCCAGAACCTTCGCCTTTaGTACATTTGTAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: PLSFTSTKFLWLGNQLHVQNLRL*YICRQV
Trigger: CACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTG...GACATGAAGCTGGTTCCCCAACCACAGAAACTTTGTACTAGTGAAAGAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CATCAGAACCTTCGCCTTTTGTACATTTGTAGGCAGGTGACTTTTGAGACCAGTTCCCTTTCTAAGTCCTaGTGGAACTGCTTGAGGATA +
Preference number: 5 (lower is better)
Translates to: HQNLRLLYICRQVTFETSSLSKS*WNCLRI
Trigger: TATCCTCAAGCAGTTCCACAAGGACTTAGAAAGGGA...ACTGGTCTCAAAAGTCACCTGCCTACAAATGTACAAAAGGCGAAGGTTCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS-3UTR CAA 90 bp CACACAGACAGACACATAGATCTGGCATCTGATAGCAGGGCATACAGTCTCATGCAACGACAGAGAGTCTaGATGTTGAAAAACTATTTC +
Preference number: 5 (lower is better)
Translates to: HTDRHIDLASDSRAYSLMQRQRV*MLKNYF
Trigger: GAAATAGTTTTTCAACATCAAGACTCTCTGTCGTTG...CATGAGACTGTATGCCCTGCTATCAGATGCCAGATCTATGTGTCTGTCTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CCA 72 bp CATAGCCGCAGCGGCAGCGGGAGTTGCACTCGTAGATaGGCAGCCCGGCTCGAAGCCGCACCTGGCCCTGGT +
Preference number: 6 (lower is better)
Translates to: HSRSGSGSCTRR*AARLEAAPGPG
Trigger: ACCAGGGCCAGGTGCGGCTTCGAGCCGGGCTGCCCATCTACGAGTGCAACTCCCGCTGCCGCTGCGGCTATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS GCA 72 bp ATGCGTCCCAGATGGCTGCGCTTGGCATTGAGCTCCTaGTCCCAGCGACGGAGCGCCCGCCTCTGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: MRPRWLRLALSS*SQRRSARLCLA
Trigger: GGCCAAGCAGAGGCGGGCGCTCCGTCGCTGGGAGCAGGAGCTCAATGCCAAGCGCAGCCATCTGGGACGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CCA 72 bp GGGCAGCAGCCTCCAGTGGGTGCCCACAGACAGTCCTaGCACTCGCAGCCCACAGCCACCTGGTTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: GQQPPVGAHRQS*HSQPTATWLRV
Trigger: CACCCTCAACCAGGTGGCTGTGGGCTGCGAGTGCCAGGACTGTCTGTGGGCACCCACTGGAGGCTGCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CCA 72 bp GCTCCTGCTCCCAGCGACGGAGCGCCCGCCTCTGCTTaGCCTTCTGCACCAGGTAGTTGGCCAAGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: APAPSDGAPASA*PSAPGSWPSLG
Trigger: ACCCAAGCTTGGCCAACTACCTGGTGCAGAAGGCCAAGCAGAGGCGGGCGCTCCGTCGCTGGGAGCAGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CAA 90 bp CGGACCCGCTTCTTAGGGGAGCCAGGGAGCCCAGCCAGGCCAAAGTaGGAGTCCATGCGGGTGCTCTCCATGTCCACGGGGTCCACTTGC +
Preference number: 6 (lower is better)
Translates to: RTRFLGEPGSPARPK*ESMRVLSMSTGSTC
Trigger: GCAAGTGGACCCCGTGGACATGGAGAGCACCCGCATGGACTCCAACTTTGGCCTGGCTGGGCTCCCTGGCTCCCCTAAGAAGCGGGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337852.10
ENST00000376687.4
ENST00000462786.1
ENST00000482260.1
CDS TCA 72 bp CACCTGGCCCTGGTCATTGTAGGCAAACTTGTGCAGTaGCGCCCCCGGGCAGCAGCCTCCAGTGGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: HLALVIVGKLVQ*RPRAAASSGCP
Trigger: TGGGCACCCACTGGAGGCTGCTGCCCGGGGGCGTCACTGCACAAGTTTGCCTACAATGACCAGGGCCAGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS GCA 72 bp GATTTGGGCAGTCATAGCCGCAGCGGCAGCGGGAGTTaGACTCGTAGATGGGCAGCCCGGCTCGAAGCCGCA +
Preference number: 6 (lower is better)
Translates to: DLGSHSRSGSGS*TRRWAARLEAA
Trigger: TGCGGCTTCGAGCCGGGCTGCCCATCTACGAGTGCAACTCCCGCTGCCGCTGCGGCTATGACTGCCCAAATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS GCA 72 bp AGCCAGGGAGCCCAGCCAGGCCAAAGTTGGAGTCCATaGGGGTGCTCTCCATGTCCACGGGGTCCACTTGCA +
Preference number: 6 (lower is better)
Translates to: SQGAQPGQSWSP*GCSPCPRGPLA
Trigger: TGCAAGTGGACCCCGTGGACATGGAGAGCACCCGCATGGACTCCAACTTTGGCCTGGCTGGGCTCCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337852.10
ENST00000376687.4
ENST00000462786.1
ENST00000482260.1
CDS CCA 72 bp ACACGTCCTCCACGTAGTCCAGGTCAAAGAGGTAGGTaGCGCCCTGACGGTCGTAGATCTGGCCCCGCCGCT +
Preference number: 6 (lower is better)
Translates to: TRPPRSPGQRGR*RPDGRRSGPAA
Trigger: AGCGGCGGGGCCAGATCTACGACCGTCAGGGCGCCACCTACCTCTTTGACCTGGACTACGTGGAGGACGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337852.10
ENST00000376687.4
ENST00000482260.1
CDS CAA 90 bp ACCTCATTCTCTACAGTGATGCGTCCCAGATGGCTGCGCTTGGCATaGAGCTCCTGCTCCCAGCGACGGAGCGCCCGCCTCTGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: TSFSTVMRPRWLRLA*SSCSQRRSARLCLA
Trigger: GGCCAAGCAGAGGCGGGCGCTCCGTCGCTGGGAGCAGGAGCTCAATGCCAAGCGCAGCCATCTGGGACGCATCACTGTAGAGAATGAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CAA 90 bp AGGTCCACCTCATTCTCTACAGTGATGCGTCCCAGATGGCTGCGCTaGGCATTGAGCTCCTGCTCCCAGCGACGGAGCGCCCGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: RSTSFSTVMRPRWLR*ALSSCSQRRSARLC
Trigger: GCAGAGGCGGGCGCTCCGTCGCTGGGAGCAGGAGCTCAATGCCAAGCGCAGCCATCTGGGACGCATCACTGTAGAGAATGAGGTGGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS GCA 72 bp CCAGGGTGCGGACGCCCCAGCCACGCCCATCATCCGTaGGGAAGATGCAGAGGTCATATCGGATACCCTTCT +
Preference number: 6 (lower is better)
Translates to: PGCGRPSHAHHP*GRCRGHIGYPS
Trigger: AGAAGGGTATCCGATATGACCTCTGCATCTTCCGCACGGATGATGGGCGTGGCTGGGGCGTCCGCACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CAA 90 bp ACAGCCACCTGGTTGAGGGTGATGCCCTCACCAACACGGTACTCATaGATGTACACGAAGGCCCGCGGAGGGCCGTCCAGGTCCACCTCA +
Preference number: 6 (lower is better)
Translates to: TATWLRVMPSPTRYS*MYTKARGGPSRSTS
Trigger: TGAGGTGGACCTGGACGGCCCTCCGCGGGCCTTCGTGTACATCAATGAGTACCGTGTTGGTGAGGGCATCACCCTCAACCAGGTGGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS TCA 72 bp CCCTTGCCCGCCTGCCGGGGGTACCCACACTGTGGTTaGCAAAGTGGGAGATGTTGCCATAGTAGGCGGCAT +
Preference number: 6 (lower is better)
Translates to: PLPACRGYPHCG*QSGRCCHSRRH
Trigger: ATGCCGCCTACTATGGCAACATCTCCCACTTTGTCAACCACAGTGTGGGTACCCCCGGCAGGCGGGCAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462786.1
CDS GCA 72 bp GGAGCCCAGCCAGGCCAAAGTTGGAGTCCATGCGGGTaGTCTCCATGTCCACGGGGTCCACTTGCATGTTGT +
Preference number: 6 (lower is better)
Translates to: GAQPGQSWSPCG*SPCPRGPLACC
Trigger: ACAACATGCAAGTGGACCCCGTGGACATGGAGAGCACCCGCATGGACTCCAACTTTGGCCTGGCTGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337852.10
ENST00000376687.4
ENST00000462786.1
ENST00000482260.1
CDS CAA 72 bp TCATTCTCTACAGTGATGCGTCCCAGATGGCTGCGCTaGGCATTGAGCTCCTGCTCCCAGCGACGGAGCGCC +
Preference number: 6 (lower is better)
Translates to: SFSTVMRPRWLR*ALSSCSQRRSA
Trigger: GGCGCTCCGTCGCTGGGAGCAGGAGCTCAATGCCAAGCGCAGCCATCTGGGACGCATCACTGTAGAGAATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CAA 72 bp TGGTTGAGGGTGATGCCCTCACCAACACGGTACTCATaGATGTACACGAAGGCCCGCGGAGGGCCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: WLRVMPSPTRYS*MYTKARGGPSR
Trigger: CCTGGACGGCCCTCCGCGGGCCTTCGTGTACATCAATGAGTACCGTGTTGGTGAGGGCATCACCCTCAACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS GCA 72 bp GGCGGCACAGGTCCTGCAGCTGATTCCAAGAAGACTTaGAACACACGCTGCAGCCTGTCAGTGGGTCAGCCA +
Preference number: 6 (lower is better)
Translates to: GGTGPAADSKKT*NTRCSLSVGQP
Trigger: TGGCTGACCCACTGACAGGCTGCAGCGTGTGTTGCAAGTCTTCTTGGAATCAGCTGCAGGACCTGTGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS CAA 72 bp CGGGGCAGCCGCTCGTCAAGGTTGTCTATGAAGACGTaGTACACCTGCAGGTTGGGGTCACACTGGGCGAGA +
Preference number: 6 (lower is better)
Translates to: RGSRSSRLSMKT*YTCRLGSHWAR
Trigger: TCTCGCCCAGTGTGACCCCAACCTGCAGGTGTACAACGTCTTCATAGACAACCTTGACGAGCGGCTGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462786.1
CDS CAA 90 bp GTCCGTAACCACGTACAGCCATCGAGTCAGACAGCTATGCCGATTTaGCTCCTGGCCAGCTGGCCTGTGACTCGTTCAATCCGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: VRNHVQPSSQTAMPI*LLASWPVTRSIRPS
Trigger: TGAGGGGCGGATTGAACGAGTCACAGGCCAGCTGGCCAGGAGCAAAATCGGCATAGCTGTCTGACTCGATGGCTGTACGTGGTTACGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS CAA 90 bp TGGTGCCGCCGGAGCAGCTCCCTTTCTAAGTCCTTGTGGAACTGCTaGAGGATACGCACACACTTGAGATTCTGCCGTGGCTCCCAGGTG +
Preference number: 6 (lower is better)
Translates to: WCRRSSSLSKSLWNC*RIRTHLRFCRGSQV
Trigger: CACCTGGGAGCCACGGCAGAATCTCAAGTGTGTGCGTATCCTCAAGCAGTTCCACAAGGACTTAGAAAGGGAGCTGCTCCGGCGGCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS TCA 72 bp ACGGTCGTAGATCTGGCCCCGCCGCTCTGCCTCCTCTaGGGTAATGATCTCTCCCACGTACTCCATGACGAA +
Preference number: 6 (lower is better)
Translates to: TVVDLAPPLCLL*GNDLSHVLHDE
Trigger: TTCGTCATGGAGTACGTGGGAGAGATCATTACCTCAGAGGAGGCAGAGCGGCGGGGCCAGATCTACGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CCA 72 bp AGGTCCACCTCATTCTCTACAGTGATGCGTCCCAGATaGCTGCGCTTGGCATTGAGCTCCTGCTCCCAGCGA +
Preference number: 6 (lower is better)
Translates to: RSTSFSTVMRPR*LRLALSSCSQR
Trigger: TCGCTGGGAGCAGGAGCTCAATGCCAAGCGCAGCCATCTGGGACGCATCACTGTAGAGAATGAGGTGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS TCA 72 bp AAGCGATGCGGGGCAGCCGCTCGTCAAGGTTGTCTATaGAGACGTTGTACACCTGCAGGTTGGGGTCACAAC +
Preference number: 6 (lower is better)
Translates to: KRCGAAARQGCL*RRCTPAGWGHN
Trigger: GTTGTGACCCCAACCTGCAGGTGTACAACGTCTTCATAGACAACCTTGACGAGCGGCTGCCCCGCATCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337852.10
ENST00000376687.4
ENST00000482260.1
CDS TCA 72 bp AAGCGATGCGGGGCAGCCGCTCGTCAAGGTTGTCTATaGAGACGTTGTACACCTGCAGGTTGGGGTCACACT +
Preference number: 6 (lower is better)
Translates to: KRCGAAARQGCL*RRCTPAGWGHT
Trigger: AGTGTGACCCCAACCTGCAGGTGTACAACGTCTTCATAGACAACCTTGACGAGCGGCTGCCCCGCATCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462786.1
CDS CCA 72 bp GAGGTCATATCGGATACCCTTCTGTACCACACGATTTaGGCAGTCATAGCCGCAGCGGCAGCGGGAGTTGCA +
Preference number: 6 (lower is better)
Translates to: EVISDTLLYHTI*AVIAAAAAGVA
Trigger: TGCAACTCCCGCTGCCGCTGCGGCTATGACTGCCCAAATCGTGTGGTACAGAAGGGTATCCGATATGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CAA 72 bp CGGTGGTGCCGCCGGAGCAGCTCCCTTTCTAAGTCCTaGTGGAACTGCTTGAGGATACGCACACACTTGAGA +
Preference number: 6 (lower is better)
Translates to: RWCRRSSSLSKS*WNCLRIRTHLR
Trigger: TCTCAAGTGTGTGCGTATCCTCAAGCAGTTCCACAAGGACTTAGAAAGGGAGCTGCTCCGGCGGCACCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CAA 72 bp AGAGGTCATATCGGATACCCTTCTGTACCACACGATTaGGGCAGTCATAGCCGCAGCGGCAGCGGGAGTTGC +
Preference number: 6 (lower is better)
Translates to: RGHIGYPSVPHD*GSHSRSGSGSC
Trigger: GCAACTCCCGCTGCCGCTGCGGCTATGACTGCCCAAATCGTGTGGTACAGAAGGGTATCCGATATGACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CAA 72 bp ATGATCTCTCCCACGTACTCCATGACGAAGCTGTTCTaGCGAATCTTCTCCAGGGTGCGGACGCCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: MISPTYSMTKLF*RIFSRVRTPQP
Trigger: TGGCTGGGGCGTCCGCACCCTGGAGAAGATTCGCAAGAACAGCTTCGTCATGGAGTACGTGGGAGAGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CAA 72 bp CGGGGCAGCCGCTCGTCAAGGTTGTCTATGAAGACGTaGTACACCTGCAGGTTGGGGTCACAACTGTGGTTG +
Preference number: 6 (lower is better)
Translates to: RGSRSSRLSMKT*YTCRLGSQLWL
Trigger: CAACCACAGTTGTGACCCCAACCTGCAGGTGTACAACGTCTTCATAGACAACCTTGACGAGCGGCTGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337852.10
ENST00000376687.4
ENST00000482260.1
CDS CAA 90 bp GTCTTTGACCGGTGGTGCCGCCGGAGCAGCTCCCTTTCTAAGTCCTaGTGGAACTGCTTGAGGATACGCACACACTTGAGATTCTGCCGT +
Preference number: 6 (lower is better)
Translates to: VFDRWCRRSSSLSKS*WNCLRIRTHLRFCR
Trigger: ACGGCAGAATCTCAAGTGTGTGCGTATCCTCAAGCAGTTCCACAAGGACTTAGAAAGGGAGCTGCTCCGGCGGCACCACCGGTCAAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CAA 90 bp GGAAGATGCAGAGGTCATATCGGATACCCTTCTGTACCACACGATTaGGGCAGTCATAGCCGCAGCGGCAGCGGGAGTTGCACTCGTAGA +
Preference number: 6 (lower is better)
Translates to: GRCRGHIGYPSVPHD*GSHSRSGSGSCTRR
Trigger: TCTACGAGTGCAACTCCCGCTGCCGCTGCGGCTATGACTGCCCAAATCGTGTGGTACAGAAGGGTATCCGATATGACCTCTGCATCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CAA 90 bp AAAGCGATGCGGGGCAGCCGCTCGTCAAGGTTGTCTATGAAGACGTaGTACACCTGCAGGTTGGGGTCACACTGGGCGAGAAAGAACAGT +
Preference number: 6 (lower is better)
Translates to: KAMRGSRSSRLSMKT*YTCRLGSHWARKNS
Trigger: ACTGTTCTTTCTCGCCCAGTGTGACCCCAACCTGCAGGTGTACAACGTCTTCATAGACAACCTTGACGAGCGGCTGCCCCGCATCGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462786.1
CDS CAA 90 bp GTTCTTGTGGCAAAGAAAGCGATGCGGGGCAGCCGCTCGTCAAGGTaGTCTATGAAGACGTTGTACACCTGCAGGTTGGGGTCACACTGG +
Preference number: 6 (lower is better)
Translates to: VLVAKKAMRGSRSSR*SMKTLYTCRLGSHW
Trigger: CCAGTGTGACCCCAACCTGCAGGTGTACAACGTCTTCATAGACAACCTTGACGAGCGGCTGCCCCGCATCGCTTTCTTTGCCACAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462786.1
CDS TCA 72 bp TGTCCACGGGGTCCACTTGCATGTTGTAATCAAAGGTaGGCTCCTCGCCTGCCCGGATGGTTCTTGTGGCAA +
Preference number: 6 (lower is better)
Translates to: CPRGPLACCNQR*APRLPGWFLWQ
Trigger: TTGCCACAAGAACCATCCGGGCAGGCGAGGAGCTCACCTTTGATTACAACATGCAAGTGGACCCCGTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337852.10
ENST00000376687.4
ENST00000462786.1
ENST00000482260.1
CDS CCA 72 bp AGTCAGACAGCTATGCCGATTTTGCTCCTGGCCAGCTaGCCTGTGACTCGTTCAATCCGCCCCTCATCACAT +
Preference number: 6 (lower is better)
Translates to: SQTAMPILLLAS*PVTRSIRPSSH
Trigger: ATGTGATGAGGGGCGGATTGAACGAGTCACAGGCCAGCTGGCCAGGAGCAAAATCGGCATAGCTGTCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS CAA 72 bp CACGTACAGCCATCGAGTCAGACAGCTATGCCGATTTaGCTCCTGGCCAGCTGGCCTGTGACTCGTTCAATC +
Preference number: 6 (lower is better)
Translates to: HVQPSSQTAMPI*LLASWPVTRSI
Trigger: GATTGAACGAGTCACAGGCCAGCTGGCCAGGAGCAAAATCGGCATAGCTGTCTGACTCGATGGCTGTACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS CAA 90 bp AAAGCGATGCGGGGCAGCCGCTCGTCAAGGTTGTCTATGAAGACGTaGTACACCTGCAGGTTGGGGTCACAACTGTGGTTGACAAAGTGG +
Preference number: 6 (lower is better)
Translates to: KAMRGSRSSRLSMKT*YTCRLGSQLWLTKW
Trigger: CCACTTTGTCAACCACAGTTGTGACCCCAACCTGCAGGTGTACAACGTCTTCATAGACAACCTTGACGAGCGGCTGCCCCGCATCGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337852.10
ENST00000376687.4
ENST00000482260.1
CDS CAA 90 bp GTTCTTGTGGCAAAGAAAGCGATGCGGGGCAGCCGCTCGTCAAGGTaGTCTATGAAGACGTTGTACACCTGCAGGTTGGGGTCACAACTG +
Preference number: 6 (lower is better)
Translates to: VLVAKKAMRGSRSSR*SMKTLYTCRLGSQL
Trigger: CAGTTGTGACCCCAACCTGCAGGTGTACAACGTCTTCATAGACAACCTTGACGAGCGGCTGCCCCGCATCGCTTTCTTTGCCACAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337852.10
ENST00000376687.4
ENST00000482260.1
CDS CAA 90 bp AGCCGCTCGTCAAGGTTGTCTATGAAGACGTTGTACACCTGCAGGTaGGGGTCACACTGGGCGAGAAAGAACAGTTGGGAGAGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: SRSSRLSMKTLYTCR*GSHWARKNSWESEE
Trigger: CTCCTCACTCTCCCAACTGTTCTTTCTCGCCCAGTGTGACCCCAACCTGCAGGTGTACAACGTCTTCATAGACAACCTTGACGAGCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462786.1
CDS TCA 72 bp CCCTCATCACATCGTCAGTCATTCTCAGCATCCGACTaGCCGCACCGTCTGTCAGGTGATCAGTCAGTCAGA +
Preference number: 6 (lower is better)
Translates to: PSSHRQSFSASD*PHRLSGDQSVR
Trigger: TCTGACTGACTGATCACCTGACAGACGGTGCGGTCAGTCGGATGCTGAGAATGACTGACGATGTGATGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS GCA 72 bp CGCCGGAGCAGCTCCCTTTCTAAGTCCTTGTGGAACTaGTTGAGGATACGCACACACTTGAGATTCTGCCGT +
Preference number: 6 (lower is better)
Translates to: RRSSSLSKSLWN*LRIRTHLRFCR
Trigger: ACGGCAGAATCTCAAGTGTGTGCGTATCCTCAAGCAGTTCCACAAGGACTTAGAAAGGGAGCTGCTCCGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CCA 72 bp TGGTGCCGCCGGAGCAGCTCCCTTTCTAAGTCCTTGTaGAACTGCTTGAGGATACGCACACACTTGAGATTC +
Preference number: 6 (lower is better)
Translates to: WCRRSSSLSKSL*NCLRIRTHLRF
Trigger: GAATCTCAAGTGTGTGCGTATCCTCAAGCAGTTCCACAAGGACTTAGAAAGGGAGCTGCTCCGGCGGCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CAA 72 bp CGGAGCAGCTCCCTTTCTAAGTCCTTGTGGAACTGCTaGAGGATACGCACACACTTGAGATTCTGCCGTGGC +
Preference number: 6 (lower is better)
Translates to: RSSSLSKSLWNC*RIRTHLRFCRG
Trigger: GCCACGGCAGAATCTCAAGTGTGTGCGTATCCTCAAGCAGTTCCACAAGGACTTAGAAAGGGAGCTGCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS CAA 90 bp GGCGACTCATCCCCACCATTGGTCAAGTCAGTCTCCTCTGATGCGTaGAAGCTGAGATTCTATCAGGGCAGACAGTCCGTAACCACGTAC +
Preference number: 6 (lower is better)
Translates to: GDSSPPLVKSVSSDA*KLRFYQGRQSVTTY
Trigger: GTACGTGGTTACGGACTGTCTGCCCTGATAGAATCTCAGCTTCAACGCATCAGAGGAGACTGACTTGACCAATGGTGGGGATGAGTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS GCA 72 bp GGCGGCACAGGTCCTGCAGCTGATTCCAAGAAGACTTaGAACACACGCTGCAGCCTTTTAAATTTTCCGCCA +
Preference number: 6 (lower is better)
Translates to: GGTGPAADSKKT*NTRCSLLNFPP
Trigger: TGGCGGAAAATTTAAAAGGCTGCAGCGTGTGTTGCAAGTCTTCTTGGAATCAGCTGCAGGACCTGTGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376687.4
CDS CAA 72 bp CCAGTCTGTCATTTCTCAGGCGACTCATCCCCACCATaGGTCAAGTCAGTCTCCTCTGATGCGTTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: PVCHFSGDSSPP*VKSVSSDALKL
Trigger: CAGCTTCAACGCATCAGAGGAGACTGACTTGACCAATGGTGGGGATGAGTCGCCTGAGAAATGACAGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS CAA 90 bp GTGGGTCAGCCAGTCTGTCATTTCTCAGGCGACTCATCCCCACCATaGGTCAAGTCAGTCTCCTCTGATGCGTTGAAGCTGAGATTCTAT +
Preference number: 6 (lower is better)
Translates to: VGQPVCHFSGDSSPP*VKSVSSDALKLRFY
Trigger: ATAGAATCTCAGCTTCAACGCATCAGAGGAGACTGACTTGACCAATGGTGGGGATGAGTCGCCTGAGAAATGACAGACTGGCTGACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS CAA 90 bp TCCCTTTCTAAGTCCTTGTGGAACTGCTTGAGGATACGCACACACTaGAGATTCTGCCGTGGCTCCCAGGTGCTCTCTGAGTCTGGATAT +
Preference number: 6 (lower is better)
Translates to: SLSKSLWNCLRIRTH*RFCRGSQVLSESGY
Trigger: ATATCCAGACTCAGAGAGCACCTGGGAGCCACGGCAGAATCTCAAGTGTGTGCGTATCCTCAAGCAGTTCCACAAGGACTTAGAAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337852.10
ENST00000376687.4
CDS TCA 72 bp CGACTCATCCCCACCATTGGTCAAGTCAGTCTCCTCTaGTGCGTTGAAGCTGAGATTCTATCAGGGCAGACA +
Preference number: 6 (lower is better)
Translates to: RLIPTIGQVSLL*CVEAEILSGQT
Trigger: TGTCTGCCCTGATAGAATCTCAGCTTCAACGCATCAGAGGAGACTGACTTGACCAATGGTGGGGATGAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337852.10
CDS GCA 72 bp CGCTCGTCAAGGTTGTCTATGAAGACGTTGTACACCTaGAGGTTGGGGTCACAACTGTGGTTGACAAAGTGG +
Preference number: 6 (lower is better)
Translates to: RSSRLSMKTLYT*RLGSQLWLTKW
Trigger: CCACTTTGTCAACCACAGTTGTGACCCCAACCTGCAGGTGTACAACGTCTTCATAGACAACCTTGACGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337852.10
ENST00000376687.4
ENST00000482260.1
CDS CAA 72 bp TCAAGGTTGTCTATGAAGACGTTGTACACCTGCAGGTaGGGGTCACACTGGGCGAGAAAGAACAGTTGGGAG +
Preference number: 6 (lower is better)
Translates to: SRLSMKTLYTCR*GSHWARKNSWE
Trigger: CTCCCAACTGTTCTTTCTCGCCCAGTGTGACCCCAACCTGCAGGTGTACAACGTCTTCATAGACAACCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462786.1