RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SUSD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000106868

Ensembl transcript IDs: ENST00000355396.7, ENST00000374263.7, ENST00000374264.6, ENST00000374270.8, ENST00000415074.1, ENST00000475283.2, ENST00000482851.1, ENST00000528773.1, ENST00000529933.5, ENST00000532348.1

Found 590 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACACGGAGCCTCTGTGCGGGCACCTGAGAAGCTGCCAGAACACCTaGCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCAT +
Preference number: 1 (lower is better)
Translates to: HTEPLCGHLRSCQNT*PAAVHPPHSVSICH
Trigger: ATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGTGTTCTGGCAGCTTCTCAGGTGCCCGCACAGAGGCTCCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000475283.2
3UTR CCA 90 bp CGAATGGTGTTGAGTCCCCAGTCCCAGTTCCTGGAGCCTTCTTGGTaGGGTAGCTCTTTGTATAATTCCATAAGCTCCCATCCACTCACC +
Preference number: 1 (lower is better)
Translates to: RMVLSPQSQFLEPSW*GSSLYNSISSHPLT
Trigger: GGTGAGTGGATGGGAGCTTATGGAATTATACAAAGAGCTACCCCACCAAGAAGGCTCCAGGAACTGGGACTGGGGACTCAACACCATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475283.2
3UTR GCA 90 bp GAATTAACAGAAATGCTTTTATATAGGAGGTTGCAGAGATTCTCTTaGAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAG +
Preference number: 1 (lower is better)
Translates to: ELTEMLLYRRLQRFS*SQCLEELTLRHHSE
Trigger: CTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAACCTCCTATATAAAAGCATTTCTGTTAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
3UTR-3UTR CCA 90 bp GGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGGGGCCCAGCTGGGAATaGAGAAAGTTGCAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: GESCRPTCSLDGSHTEPLGPSWE*RKLQAH
Trigger: GTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCC...CAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp GAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTCACACGGAGCCTCTGTaGGGGCACCTGAGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: ELTLRHHSEEVPAKIHRSHTEPL*GHLRSC
Trigger: GCAGCTTCTCAGGTGCCCGCACAGAGGCTCCGTGTG...AGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp ACACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCAACACCCGCCATCTaGAGCAGCATGAGTGACGAA +
Preference number: 2 (lower is better)
Translates to: TPAQQQCILPTQCPSAITPTPAI*SSMSDE
Trigger: TTCGTCACTCATGCTGCTGCAGATGGCGGGTGTTGG...TGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475283.2
3UTR-3UTR TCA 90 bp GGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGGTTTTCTCCTTATGGTaGCTCCTCAGGGATAGCCAC +
Preference number: 2 (lower is better)
Translates to: GESCRPTCSLDGSHTEPLVFSLW*LLRDSH
Trigger: GTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAAC...CAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp AGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAGCTGCCAGAACACCTaGCCAGCAGCAGTGCATCCT +
Preference number: 2 (lower is better)
Translates to: SQCLEELTLRHHSEEVPASCQNT*PAAVHP
Trigger: AGGATGCACTGCTGCTGGGCAGGTGTTCTGGCAGCT...GGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR TCA 90 bp GAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGTTTTCTCCTTATGGTaGCTCCTCAGGGATAGCCAC +
Preference number: 2 (lower is better)
Translates to: EKVAGPHAPWTEVTRSLCVFSLW*LLRDSH
Trigger: GTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAAC...ACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp TCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCAAGTTGCAGGCCCACATaGTCCCTGGACGGAAGTCAC +
Preference number: 2 (lower is better)
Translates to: SRGADPQASLRGSPSQDSSCRPT*SLDGSH
Trigger: GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACT...TGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp CAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGCCTGCCCAGCAGCAGTaGATCCTCCCCACTCAGTGT +
Preference number: 2 (lower is better)
Translates to: QCTSGVSSSLHRTGPVAGPAQQQ*ILPTQC
Trigger: ACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGG...CCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR CCA 90 bp ACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAAGGCCCACATGCTCCCTaGACGGAAGTCACACGGAGC +
Preference number: 2 (lower is better)
Translates to: TQRKSQPRFTDLYVAFGQGPHAP*TEVTRS
Trigger: GCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCC...TTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR TCA 90 bp GGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCGTTTTCTCCTTATGGTaGCTCCTCAGGGATAGCCAC +
Preference number: 2 (lower is better)
Translates to: GADPQASLRGSPSQDSQIVFSLW*LLRDSH
Trigger: GTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAAC...GATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp TCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAGCTGCCAGAACACCTaGCCAGCAGCAGTGCATCCT +
Preference number: 2 (lower is better)
Translates to: SGVSSSLHRTGPVAGKTQSCQNT*PAAVHP
Trigger: AGGATGCACTGCTGCTGGGCAGGTGTTCTGGCAGCT...CTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp CAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAGTTGCAGGCCCACATaGTCCCTGGACGGAAGTCAC +
Preference number: 2 (lower is better)
Translates to: QCTSGVSSSLHRTGPVAGSCRPT*SLDGSH
Trigger: GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACT...CCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR CAA 90 bp AGTCCCCAGTCCCAGTTCCTGGAGCCTTCTTGGTGGGGTAGCTCTTaGTATAATTCCATAAGCTCCCATCCACTCACCCTCCTCCCATTT +
Preference number: 2 (lower is better)
Translates to: SPQSQFLEPSWWGSS*YNSISSHPLTLLPF
Trigger: AAATGGGAGGAGGGTGAGTGGATGGGAGCTTATGGAATTATACAAAGAGCTACCCCACCAAGAAGGCTCCAGGAACTGGGACTGGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475283.2
3UTR-3UTR TCA 90 bp TCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGCTGCCATCACACCGCTaGGAAGGAGAGGAATGTGAG +
Preference number: 2 (lower is better)
Translates to: SGVSSSLHRTGPVAGKTQLPSHR*EGEECE
Trigger: CTCACATTCCTCTCCTTCTCAGCGGTGTGATGGCAG...CTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000475283.2
3UTR-3UTR GCA 90 bp ACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAAAGCTGCCAGAACACCTaGCCAGCAGCAGTGCATCCT +
Preference number: 2 (lower is better)
Translates to: TQRKSQPRFTDLYVAFGQSCQNT*PAAVHP
Trigger: AGGATGCACTGCTGCTGGGCAGGTGTTCTGGCAGCT...TTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp CAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGGGGAATGGAGAAAGTTaGAGGCCCACATGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: QCTSGVSSSLHRTGPVAGGNGES*RPTCSL
Trigger: CAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCC...CCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR CCA 90 bp TGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACGGCCCACATGCTCCCTaGACGGAAGTCACACGGAGC +
Preference number: 2 (lower is better)
Translates to: CSLRSISQCTSGVSSSLHGPHAP*TEVTRS
Trigger: GCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCC...GTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR TCA 90 bp CTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATTCCTGCTGCCATCACACCGCTaGGAAGGAGAGGAATGTGAG +
Preference number: 2 (lower is better)
Translates to: LKFIAQNWSCSREDSEFLLPSHR*EGEECE
Trigger: CTCACATTCCTCTCCTTCTCAGCGGTGTGATGGCAG...CAGGAATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000475283.2
3UTR-3UTR TCA 90 bp GGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATCTGCCATCACACCGCTaGGAAGGAGAGGAATGTGAG +
Preference number: 2 (lower is better)
Translates to: GVSSSLHRTGPVAGKTQNLPSHR*EGEECE
Trigger: CTCACATTCCTCTCCTTCTCAGCGGTGTGATGGCAG...ATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000475283.2
3UTR-3UTR TCA 90 bp ATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCTGCCATCACACCGCTaGGAAGGAGAGGAATGTGAG +
Preference number: 2 (lower is better)
Translates to: ITQRKSQPRFTDLYVAFGLPSHR*EGEECE
Trigger: CTCACATTCCTCTCCTTCTCAGCGGTGTGATGGCAG...ACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000475283.2
3UTR-3UTR TCA 90 bp TGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACCTCTGTGCGGGCACCTaGGAAGCTGCCAGAACACCT +
Preference number: 2 (lower is better)
Translates to: CSLRSISQCTSGVSSSLHLCAGT*EAARTP
Trigger: AGGTGTTCTGGCAGCTTCTCAGGTGCCCGCACAGAG...GTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp AGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGACCTGCCCAGCAGCAGTaGATCCTCCCCACTCAGTGT +
Preference number: 2 (lower is better)
Translates to: SLRSISQCTSGVSSSLHRPAQQQ*ILPTQC
Trigger: ACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGG...TCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp AGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTACCTGCCCAGCAGCAGTaGATCCTCCCCACTCAGTGT +
Preference number: 2 (lower is better)
Translates to: RIPEFSPYGDSSGIATILPAQQQ*ILPTQC
Trigger: ACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGG...TAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp AATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTCACACGGAGCCTCTGTaGGGGCACCTGAGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: NITVYIRSLKFIAQNWSCHTEPL*GHLRSC
Trigger: GCAGCTTCTCAGGTGCCCGCACAGAGGCTCCGTGTG...ACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp TTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCACACGGAGCCTCTGTaGGGGCACCTGAGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: FTDLYVAFGQYHSVHQESHTEPL*GHLRSC
Trigger: GCAGCTTCTCAGGTGCCCGCACAGAGGCTCCGTGTG...AGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp CAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATAGTTGCAGGCCCACATaGTCCCTGGACGGAAGTCAC +
Preference number: 2 (lower is better)
Translates to: QRKSQPRFTDLYVAFGQYSCRPT*SLDGSH
Trigger: GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACT...ATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp AGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTTGCAGGCCCACATaGTCCCTGGACGGAAGTCAC +
Preference number: 2 (lower is better)
Translates to: RKSQPRFTDLYVAFGQYHSCRPT*SLDGSH
Trigger: GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACT...GTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR CCA 90 bp TTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGGCCCACATGCTCCCTaGACGGAAGTCACACGGAGC +
Preference number: 2 (lower is better)
Translates to: FGQYHSVHQESQVHCTELGPHAP*TEVTRS
Trigger: GCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCC...CAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR CCA 90 bp AGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAAGGAATGGGGCCCAGCTaGGAATGGAGAAAGTTGCAG +
Preference number: 2 (lower is better)
Translates to: RSLKFIAQNWSCSREDSEGMGPS*EWRKLQ
Trigger: CTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCC...TTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR CCA 90 bp TTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCTTCATTGCACAGAACTaGTCCTGTAGCAGGGAAGAC +
Preference number: 2 (lower is better)
Translates to: LQSMSRGADPQASLRGSPFIAQN*SCSRED
Trigger: GTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAA...GGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR CCA 90 bp GAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGCCCAGTCCCAGTTCCTaGAGCCTTCTTGGTGGGGTA +
Preference number: 2 (lower is better)
Translates to: EVPAKIHRSVCSLRSISQPSPSS*SLLGGV
Trigger: TACCCCACCAAGAAGGCTCCAGGAACTGGGACTGGG...CTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475283.2
3UTR-3UTR TCA 90 bp TCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATAAGTGACGAATGGTGTTaGGTCCCCAGTCCCAGTTCC +
Preference number: 2 (lower is better)
Translates to: SEEVPAKIHRSVCSLRSISDEWC*VPSPSS
Trigger: GGAACTGGGACTGGGGACTCAACACCATTCGTCACT...TATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475283.2
3UTR-3UTR TCA 90 bp AGCAGGGAAGACTCAGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGACCATCTGCAGCAGCATaGGTGACGAATGGTGTTGAG +
Preference number: 2 (lower is better)
Translates to: SREDSEFLSFLLMVTPQGPSAAA*VTNGVE
Trigger: CTCAACACCATTCGTCACTCATGCTGCTGCAGATGG...TCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCTGAGTCTTCCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475283.2
3UTR-3UTR GCA 90 bp ATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTAAATCCTGCCCAGCAGCAGTaGATCCTCCCCACTCAGTGT +
Preference number: 2 (lower is better)
Translates to: IPEFSPYGDSSGIATILNPAQQQ*ILPTQC
Trigger: ACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGG...ATTTAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp TGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGCTGCCAGAACACCTaGCCAGCAGCAGTGCATCCT +
Preference number: 2 (lower is better)
Translates to: CSLRSISQCTSGVSSSLHSCQNT*PAAVHP
Trigger: AGGATGCACTGCTGCTGGGCAGGTGTTCTGGCAGCT...GTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp CGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTAGCTGCCAGAACACCTaGCCAGCAGCAGTGCATCCT +
Preference number: 2 (lower is better)
Translates to: RSISQCTSGVSSSLHRTGSCQNT*PAAVHP
Trigger: AGGATGCACTGCTGCTGGGCAGGTGTTCTGGCAGCT...ACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp ACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCACACACGGAGCCTCTGTaGGGGCACCTGAGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: TSLFSFSMTSFIKSNSSPHTEPL*GHLRSC
Trigger: GCAGCTTCTCAGGTGCCCGCACAGAGGCTCCGTGTG...TGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
3UTR-3UTR GCA 90 bp GGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTTGCAGAGATTCTCTTaGAGTCAATGTCTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: GADPQASLRGSPSQDSQILQRFS*SQCLEE
Trigger: CTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAA...GATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR CCA 90 bp ACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAGGCCCACATGCTCCCTaGACGGAAGTCACACGGAGC +
Preference number: 2 (lower is better)
Translates to: TSLFSFSMTSFIKSNSSPGPHAP*TEVTRS
Trigger: GCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCC...TGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
3UTR-3UTR CCA 90 bp GAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGGGAATGGGGCCCAGCTaGGAATGGAGAAAGTTGCAG +
Preference number: 2 (lower is better)
Translates to: EVPAKIHRSVCSLRSISQGMGPS*EWRKLQ
Trigger: CTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCC...CTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR TCA 90 bp ACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAAGTTTTCTCCTTATGGTaGCTCCTCAGGGATAGCCAC +
Preference number: 2 (lower is better)
Translates to: TQRKSQPRFTDLYVAFGQVFSLW*LLRDSH
Trigger: GTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAAC...TTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp TGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACGGGAATGGAGAAAGTTaGAGGCCCACATGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: CSLRSISQCTSGVSSSLHGNGES*RPTCSL
Trigger: CAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCC...GTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR CCA 90 bp AGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTAGGAATGGGGCCCAGCTaGGAATGGAGAAAGTTGCAG +
Preference number: 2 (lower is better)
Translates to: RIPEFSPYGDSSGIATILGMGPS*EWRKLQ
Trigger: CTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCC...TAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR CCA 90 bp CCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTATTCATTGCACAGAACTaGTCCTGTAGCAGGGAAGAC +
Preference number: 2 (lower is better)
Translates to: PSGITQRKSQPRFTDLYVFIAQN*SCSRED
Trigger: GTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAA...TACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR CCA 90 bp GAAGGAGAGGAATGTGAGAATGATCACAACAGCCAGGGAACCCAGTCCAACACCCTGGAGCCTTCTTGGTaGGGTAGCTCTTTGTATAAT +
Preference number: 2 (lower is better)
Translates to: EGEECENDHNSQGTQSNTLEPSW*GSSLYN
Trigger: ATTATACAAAGAGCTACCCCACCAAGAAGGCTCCAG...GGTGTTGGACTGGGTTCCCTGGCTGTTGTGATCATTCTCACATTCCTCTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475283.2
3UTR-3UTR GCA 90 bp CACAGCAGGAAACTTATTGGCATGGCCAGGCTAGTATATTTTCTCATTAGTATACCTGCCCAGCAGCAGTaGATCCTCCCCACTCAGTGT +
Preference number: 2 (lower is better)
Translates to: HSRKLIGMARLVYFLISIPAQQQ*ILPTQC
Trigger: ACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGG...TATACTAATGAGAAAATATACTAGCCTGGCCATGCCAATAAGTTTCCTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
3UTR-3UTR GCA 90 bp GCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGGAATGGAGAAAGTTaGAGGCCCACATGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: AKIHRSVCSLRSISQCTSGNGES*RPTCSL
Trigger: CAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCC...TGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp CCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGGGAATGGAGAAAGTTaGAGGCCCACATGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: PRFTDLYVAFGQYHSVHQGNGES*RPTCSL
Trigger: CAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCC...CTGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR TCA 90 bp CGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTGTTTTCTCCTTATGGTaGCTCCTCAGGGATAGCCAC +
Preference number: 2 (lower is better)
Translates to: RSISQCTSGVSSSLHRTGVFSLW*LLRDSH
Trigger: GTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAAC...ACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp GAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAGTTGCAGGCCCACATaGTCCCTGGACGGAAGTCAC +
Preference number: 2 (lower is better)
Translates to: ETFAYVTVLFFNDLLHKVSCRPT*SLDGSH
Trigger: GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACT...GACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
3UTR-3UTR CCA 90 bp ACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAGGAATGGGGCCCAGCTaGGAATGGAGAAAGTTGCAG +
Preference number: 2 (lower is better)
Translates to: TSLFSFSMTSFIKSNSSPGMGPS*EWRKLQ
Trigger: CTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCC...TGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
3UTR-3UTR CCA 90 bp TCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATTCATTGCACAGAACTaGTCCTGTAGCAGGGAAGAC +
Preference number: 2 (lower is better)
Translates to: SEEVPAKIHRSVCSLRSIFIAQN*SCSRED
Trigger: GTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAA...TATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR CCA 90 bp GCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCATTCATTGCACAGAACTaGTCCTGTAGCAGGGAAGAC +
Preference number: 2 (lower is better)
Translates to: AKIHRSVCSLRSISQCTSFIAQN*SCSRED
Trigger: GTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAA...TGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR GCA 90 bp TCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCCCATCTCACTTGCAGAGATTCTCTTaGAGTCAATGTCTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: SMTSFIKSNSSPNLSPSHLQRFS*SQCLEE
Trigger: CTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAA...GTGAGATGGGCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
3UTR CAA 90 bp GAATGGATTCTGAATGAATTAACAGAAATGCTTTTATATAGGAGGTaGCAGAGATTCTCTTGCAGTCAATGTCTAGAGGAGCTGACCCTC +
Preference number: 2 (lower is better)
Translates to: EWILNELTEMLLYRR*QRFSCSQCLEELTL
Trigger: GAGGGTCAGCTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAACCTCCTATATAAAAGCATTTCTGTTAATTCATTCAGAATCCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
3UTR-3UTR GCA 90 bp TTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCTTGCAGAGATTCTCTTaGAGTCAATGTCTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: FSFSMTSFIKSNSSPNLSLQRFS*SQCLEE
Trigger: CTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAA...GCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
3UTR GCA 72 bp GGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATaGTCCCTGGACGGAAGTCACACGGAGCCTCTGTGC +
Preference number: 3 (lower is better)
Translates to: GPAGNGESCRPT*SLDGSHTEPLC
Trigger: GCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR-3UTR CAA 90 bp CTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCTGGGAATGGAGAAAGTaGCAGGCCCACATGCTCCCT +
Preference number: 3 (lower is better)
Translates to: LPSSSASSPLSVHLPSHRWEWRK*QAHMLP
Trigger: AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCA...GCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000475283.2
3UTR TCA 72 bp GGGAACCCAGTCCAACACCCGCCATCTGCAGCAGCATaGGTGACGAATGGTGTTGAGTCCCCAGTCCCAGTT +
Preference number: 3 (lower is better)
Translates to: GNPVQHPPSAAA*VTNGVESPVPV
Trigger: AACTGGGACTGGGGACTCAACACCATTCGTCACTCATGCTGCTGCAGATGGCGGGTGTTGGACTGGGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475283.2
3UTR-3UTR CAA 90 bp GAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTTGGTGGGGTAGCTCTTaGTATAATTCCATAAGCTCC +
Preference number: 3 (lower is better)
Translates to: EKVAGPHAPWTEVTRSLCWWGSS*YNSISS
Trigger: GGAGCTTATGGAATTATACAAAGAGCTACCCCACCA...ACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475283.2
3UTR-3UTR CAA 90 bp CCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTATGGGAATGGAGAAAGTaGCAGGCCCACATGCTCCCT +
Preference number: 3 (lower is better)
Translates to: PSGITQRKSQPRFTDLYVWEWRK*QAHMLP
Trigger: AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCA...TACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR CCA 72 bp TTGAGTCCCCAGTCCCAGTTCCTGGAGCCTTCTTGGTaGGGTAGCTCTTTGTATAATTCCATAAGCTCCCAT +
Preference number: 3 (lower is better)
Translates to: LSPQSQFLEPSW*GSSLYNSISSH
Trigger: ATGGGAGCTTATGGAATTATACAAAGAGCTACCCCACCAAGAAGGCTCCAGGAACTGGGACTGGGGACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475283.2
3UTR-3UTR CAA 90 bp TTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGTGGGAATGGAGAAAGTaGCAGGCCCACATGCTCCCT +
Preference number: 3 (lower is better)
Translates to: FGQYHSVHQESQVHCTELWEWRK*QAHMLP
Trigger: AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCA...CAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR CCA 72 bp GTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTaGTCCTGTAGCAGGGAAGACTCAGAATTCCTGAGT +
Preference number: 3 (lower is better)
Translates to: VYIRSLKFIAQN*SCSREDSEFLS
Trigger: ACTCAGGAATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR GCA 72 bp ATATATAGGACAATAGAAATTGCATCAAAGCAATGCTaGCTAACAGACACAGCAGGAAACTTATTGGCATGG +
Preference number: 3 (lower is better)
Translates to: IYRTIEIASKQC*LTDTAGNLLAW
Trigger: CCATGCCAATAAGTTTCCTGCTGTGTCTGTTAGGCAGCATTGCTTTGATGCAATTTCTATTGTCCTATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp GTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGGGCGAAACCGATGACGGCTaGCATCGAGCGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VAGPHAPWTEVTRSLCAGETDDG*HRAPGR
Trigger: CCTCCCAGGCGCTCGATGCCAGCCGTCATCGGTTTC...GCCCGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp TGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGACACACGGAGCCTCTGTaGGGGCACCTGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: WGPAGNGESCRPTCSLDGHTEPL*GHLRSC
Trigger: GCAGCTTCTCAGGTGCCCGCACAGAGGCTCCGTGTG...TCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp CTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCGAAACCGATGACGGCTaGCATCGAGCGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LPSSSASSPLSVHLPSHRETDDG*HRAPGR
Trigger: CCTCCCAGGCGCTCGATGCCAGCCGTCATCGGTTTC...GCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR GCA 90 bp CTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCTTGGGGACTCCCATGTaGCCAGGCCTGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LPSSSASSPLSVHLPSHRLGTPM*PGLCSL
Trigger: CAAGCTGCACAGGCCTGGGCACATGGGAGTCCCCAA...GCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CCA 90 bp GGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGGGCCCAGCTGGGAATaGAGAAAGTTGCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: GAQLGMEKVAGPHAPWTEGPSWE*RKLQAH
Trigger: GTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCC...TTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp GTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGGGCGGAATGGGGCCCAGCTaGGAATGGAGAAAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VAGPHAPWTEVTRSLCAGGMGPS*EWRKLQ
Trigger: CTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCC...GCCCGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp CCAGGAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTCTCTGTGCGGGCACCTaGGAAGCTGCCAGAACACCT +
Preference number: 4 (lower is better)
Translates to: PGMGPSWEWRKLQAHMLPLCAGT*EAARTP
Trigger: AGGTGTTCTGGCAGCTTCTCAGGTGCCCGCACAGAG...AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp TGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAACGCATCGCCCTCCATaGCTGCACAGGCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: WGPAGNGESCRPTCSLDGTHRPP*LHRPET
Trigger: AGTTTCTGGCCTGTGCAGGCATGGAGGGCGATGCGT...TCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCAGGCCCACATGCTCCCTaGACGGAAGTCACACGGAGC +
Preference number: 4 (lower is better)
Translates to: PSWEWRKLQAHMLPGRKSGPHAP*TEVTRS
Trigger: GCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCC...TGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp GTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGGGCCAGGCCTGTGCAGCTTaGAACTGTATCTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: VAGPHAPWTEVTRSLCAGQACAA*NCIFWN
Trigger: GTTCCAGAAGATACAGTTTCAAGCTGCACAGGCCTG...GCCCGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp AAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGCCCAGCCTGGAGCTGTaGTTTCCTACCAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: KVAGPHAPWTEVTRSLCAPSLEL*FPTKMA
Trigger: CGCCATCTTGGTAGGAAATCACAGCTCCAGGCTGGG...CGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp AATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTCTGGAAACCGATaGCGGCTGGCATCGAGCGCC +
Preference number: 4 (lower is better)
Translates to: NGESCRPTCSLDGSHTEPLSGNR*RLASSA
Trigger: GGCGCTCGATGCCAGCCGTCATCGGTTTCCAGACAG...AGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACTGGCTTTCCTCAGTCTaGGGCGTGGTAGAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: EWGPAGNGESCRPTCSLDWLSSV*GVVEVL
Trigger: GAGGACCTCTACCACGCCTCAGACTGAGGAAAGCCA...GTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCTGAGACTCTGTGCGGGCACCTaGGAAGCTGCCAGAACACCT +
Preference number: 4 (lower is better)
Translates to: QQQCILPTQCPSAITPLRLCAGT*EAARTP
Trigger: AGGTGTTCTGGCAGCTTCTCAGGTGCCCGCACAGAG...TCTCAGCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000475283.2
CDS-3UTR GCA 90 bp GGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCGAGCGCCTGGGAGGTaGTGTGGAGATGTTCACGGT +
Preference number: 4 (lower is better)
Translates to: GNGESCRPTCSLDGSHTERAPGR*CGDVHG
Trigger: ACCGTGAACATCTCCACAGCACCTCCCAGGCGCTCG...CTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp GAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTCCTGCCCAGCAGCAGTaGATCCTCCCCACTCAGTGT +
Preference number: 4 (lower is better)
Translates to: EKVAGPHAPWTEVTRSLCPAQQQ*ILPTQC
Trigger: ACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGG...ACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp GGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTGCCCAGCAGCAGTaGATCCTCCCCACTCAGTGT +
Preference number: 4 (lower is better)
Translates to: GNGESCRPTCSLDGSHTEPAQQQ*ILPTQC
Trigger: ACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGG...CTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp GAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCAGTTGCAGGCCCACATaGTCCCTGGACGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: ESCRPTCSLDGSHTEPLCSCRPT*SLDGSH
Trigger: GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACT...GCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp ACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCCCACACCGCCCAGCCTaGAGCTGTGATTTCCTACCA +
Preference number: 4 (lower is better)
Translates to: TCPAAVHPPHSVSICHHTPHRPA*SCDFLP
Trigger: TGGTAGGAAATCACAGCTCCAGGCTGGGCGGTGTGG...GGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CCA 90 bp GAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTCTGGCATCGAGCGCCTaGGAGGTGCTGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: EKVAGPHAPWTEVTRSLCLASSA*EVLWRC
Trigger: ACATCTCCACAGCACCTCCCAGGCGCTCGATGCCAG...ACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAGGAATGGGGCCCAGCTaGGAATGGAGAAAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: WGPAGNGESCRPTCSLDGGMGPS*EWRKLQ
Trigger: CTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCC...TCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp AAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGCCCAGTCCCAGTTCCTaGAGCCTTCTTGGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: KVAGPHAPWTEVTRSLCAPSPSS*SLLGGV
Trigger: TACCCCACCAAGAAGGCTCCAGGAACTGGGACTGGG...CGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475283.2
CDS-3UTR TCA 90 bp AGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCCTGTCTGGAAACCGATaGCGGCTGGCATCGAGCGCC +
Preference number: 4 (lower is better)
Translates to: SQCLEELTLRHHSEEVPALSGNR*RLASSA
Trigger: GGCGCTCGATGCCAGCCGTCATCGGTTTCCAGACAG...GGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp ACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCACAGAGCCCGGAGACTaGCATTGTAGTTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: TCPAAVHPPHSVSICHHTTEPGD*HCSWYP
Trigger: CGGGTACCAACTACAATGTCAGTCTCCGGGCTCTGT...GGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR TCA 90 bp GAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGGTTGTCAGGGAGATaGCCACAGGAAGTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: EWGPAGNGESCRPTCSLDGLSGR*PQEVPK
Trigger: CTTCGGAACTTCCTGTGGTCATCTCCCTGACAACCC...GTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTTGGCTTTCCTCAGTCTaGGGCGTGGTAGAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: EKVAGPHAPWTEVTRSLCWLSSV*GVVEVL
Trigger: GAGGACCTCTACCACGCCTCAGACTGAGGAAAGCCA...ACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGCTGCCATCACACCGCTaGGAAGGAGAGGAATGTGAG +
Preference number: 4 (lower is better)
Translates to: GESCRPTCSLDGSHTEPLLPSHR*EGEECE
Trigger: CTCACATTCCTCTCCTTCTCAGCGGTGTGATGGCAG...CAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp GAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACAGTGACGAATGGTGTTaGGTCCCCAGTCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: EWGPAGNGESCRPTCSLDSDEWC*VPSPSS
Trigger: GGAACTGGGACTGGGGACTCAACACCATTCGTCACT...GTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475283.2
CDS-3UTR GCA 90 bp CCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCATCACGGTGTAGTTGGTaGCTGGGTACAGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: PSWEWRKLQAHMLPGRKSSRCSW*LGTGLG
Trigger: GCCTAGCCCTGTACCCAGGCACCAACTACACCGTGA...TGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp CCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACAGCTGCCAGAACACCTaGCCAGCAGCAGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: PAGNGESCRPTCSLDGSHSCQNT*PAAVHP
Trigger: AGGATGCACTGCTGCTGGGCAGGTGTTCTGGCAGCT...GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp CGAATGGTGTTGAGTCCCCAGTCCCAGTTCCTGGAGCCTTCTTGGTGGGGTAGCAGCTGCCAGAACACCTaGCCAGCAGCAGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: RMVLSPQSQFLEPSWWGSSCQNT*PAAVHP
Trigger: AGGATGCACTGCTGCTGGGCAGGTGTTCTGGCAGCT...GCTACCCCACCAAGAAGGCTCCAGGAACTGGGACTGGGGACTCAACACCATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475283.2
CDS-3UTR GCA 90 bp GGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGGGGAATGGAGAAAGTTaGAGGCCCACATGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GESCRPTCSLDGSHTEPLGNGES*RPTCSL
Trigger: CAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCC...CAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp GGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGGCATCGGTGGTCGGGTaGAAAGGTTCAGGTCCATTC +
Preference number: 4 (lower is better)
Translates to: GESCRPTCSLDGSHTEPLASVVG*KGSGPF
Trigger: GAATGGACCTGAACCTTTCCACCCGACCACCGATGC...CAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp AAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGGGCGTGCCGCATTTCTaGAGGGTTGCCACAGTTGAT +
Preference number: 4 (lower is better)
Translates to: KVAGPHAPWTEVTRSLCAGVPHF*RVATVD
Trigger: ATCAACTGTGGCAACCCTCCAGAAATGCGGCACGCC...CGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGGGCGTGCCGCATTTCTaGAGGGTTGCCACAGTTGAT +
Preference number: 4 (lower is better)
Translates to: GESCRPTCSLDGSHTEPLGVPHF*RVATVD
Trigger: ATCAACTGTGGCAACCCTCCAGAAATGCGGCACGCC...CAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp ACACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCACACCGCCCAGCCTaGAGCTGTGATTTCCTACCA +
Preference number: 4 (lower is better)
Translates to: TPAQQQCILPTQCPSAITPHRPA*SCDFLP
Trigger: TGGTAGGAAATCACAGCTCCAGGCTGGGCGGTGTGG...TGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR TCA 90 bp TTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCCTGTCTGGAAACCGATaGCGGCTGGCATCGAGCGCC +
Preference number: 4 (lower is better)
Translates to: LQSMSRGADPQASLRGSPLSGNR*RLASSA
Trigger: GGCGCTCGATGCCAGCCGTCATCGGTTTCCAGACAG...GGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCAACAGAGCCCGGAGACTaGCATTGTAGTTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: PSWEWRKLQAHMLPGRKSTEPGD*HCSWYP
Trigger: CGGGTACCAACTACAATGTCAGTCTCCGGGCTCTGT...TGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACGGGTTGTCAGGGAGATaGCCACAGGAAGTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: PAGNGESCRPTCSLDGSHGLSGR*PQEVPK
Trigger: CTTCGGAACTTCCTGTGGTCATCTCCCTGACAACCC...GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGGGTTGTCAGGGAGATaGCCACAGGAAGTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: EKVAGPHAPWTEVTRSLCGLSGR*PQEVPK
Trigger: CTTCGGAACTTCCTGTGGTCATCTCCCTGACAACCC...ACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCTGAGAAGGAGAGGCTGCCATCACACCGCTaGGAAGGAGAGGAATGTGAG +
Preference number: 4 (lower is better)
Translates to: VHPPHSVSICHHTAEKERLPSHR*EGEECE
Trigger: CTCACATTCCTCTCCTTCTCAGCGGTGTGATGGCAG...CCTCTCCTTCTCAGCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000475283.2
CDS-3UTR TCA 90 bp ACACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACTGCCATCACACCGCTaGGAAGGAGAGGAATGTGAG +
Preference number: 4 (lower is better)
Translates to: TPAQQQCILPTQCPSAITLPSHR*EGEECE
Trigger: CTCACATTCCTCTCCTTCTCAGCGGTGTGATGGCAG...TGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000475283.2
CDS-3UTR GCA 90 bp GAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTCCAACACCCGCCATCTaGAGCAGCATGAGTGACGAA +
Preference number: 4 (lower is better)
Translates to: EKVAGPHAPWTEVTRSLCPTPAI*SSMSDE
Trigger: TTCGTCACTCATGCTGCTGCAGATGGCGGGTGTTGG...ACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp GGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGATTTCCTACCAAGATaGCGTGCCGCATTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GAQLGMEKVAGPHAPWTEDFLPR*RAAFLE
Trigger: CTCCAGAAATGCGGCACGCCATCTTGGTAGGAAATC...TTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCAGCCTGGGAGGTGCTGTaGAGATGTTCACGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: PSWEWRKLQAHMLPGRKSAWEVL*RCSRCS
Trigger: ACTACACCGTGAACATCTCCACAGCACCTCCCAGGC...TGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACGCCTGGGAGGTGCTGTaGAGATGTTCACGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: PAGNGESCRPTCSLDGSHAWEVL*RCSRCS
Trigger: ACTACACCGTGAACATCTCCACAGCACCTCCCAGGC...GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGGCCCACATGCTCCCTaGACGGAAGTCACACGGAGC +
Preference number: 4 (lower is better)
Translates to: CSQCLEELTLRHHSEEVPGPHAP*TEVTRS
Trigger: GCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCC...TGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp CAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCTGAGACATTCAAAGCTCCCATaGGTGTTCACGCATCGCCCT +
Preference number: 4 (lower is better)
Translates to: QQQCILPTQCPSAITPLRHSKLP*VFTHRP
Trigger: AGGGCGATGCGTGAACACTCATGGGAGCTTTGAATG...TCTCAGCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR TCA 90 bp GTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGGGCTATCTTCTGGAACACTaGAGAATCCTTCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: VAGPHAPWTEVTRSLCAGYLLEH*RILLCK
Trigger: CTTGCAGAGAAGGATTCTTCAGTGTTCCAGAAGATA...GCCCGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CCAGGAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTTGGGCAAATTCCTTCTaGTACCATCTCTGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: PGMGPSWEWRKLQAHMLPWANSF*YHLWPQ
Trigger: TTGGGGCCAGAGATGGTATCAGAAGGAATTTGCCCA...AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTCTCTGTGCGGGCACCTaGGAAGCTGCCAGAACACCT +
Preference number: 4 (lower is better)
Translates to: ADPQASLRGSPSQDSQICLCAGT*EAARTP
Trigger: AGGTGTTCTGGCAGCTTCTCAGGTGCCCGCACAGAG...ACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp ACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGTTTTCTCCTTATGGTaGCTCCTCAGGGATAGCCAC +
Preference number: 4 (lower is better)
Translates to: TCPAAVHPPHSVSICHHTVFSLW*LLRDSH
Trigger: GTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAAC...GGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000475283.2
CDS-3UTR GCA 90 bp TGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGACACAGTCTATTTCTGTaGATGATGTGGCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: WGPAGNGESCRPTCSLDGHSLFL*MMWHRW
Trigger: CCACCGATGCCACATCATGCACAGAAATAGACTGTG...TCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp CACTCAGTGTCCATCTGCCATCACACCGCTGAGAAGGAGAGGAATGTGAGAATGCACACGGAGCCTCTGTaGGGGCACCTGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: HSVSICHHTAEKERNVRMHTEPL*GHLRSC
Trigger: GCAGCTTCTCAGGTGCCCGCACAGAGGCTCCGTGTG...CATTCTCACATTCCTCTCCTTCTCAGCGGTGTGATGGCAGATGGACACTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000475283.2
CDS-3UTR CCA 90 bp TCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAACCCCCGGGGGTGTTGTaGCAAGATGTGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SMSRGADPQASLRGSPSQPPGVL*QDVWFP
Trigger: TGGGAACCACACATCTTGCCACAACACCCCCGGGGG...TTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACCCCCGGGGGTGTTGTaGCAAGATGTGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SRGADPQASLRGSPSQDSPPGVL*QDVWFP
Trigger: TGGGAACCACACATCTTGCCACAACACCCCCGGGGG...TGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCTGAGAAGGAGAGGTGTTCACGGTGTAGTTaGTGCCTGGGTACAGGGCTA +
Preference number: 4 (lower is better)
Translates to: VHPPHSVSICHHTAEKERCSRCS*CLGTGL
Trigger: TAGCCCTGTACCCAGGCACCAACTACACCGTGAACA...CCTCTCCTTCTCAGCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CCA 90 bp GGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAACATCTGGAACATCTTTaGCCAGTAGTTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GAQLGMEKVAGPHAPWTEHLEHL*PVVLQP
Trigger: TGGCTGCAGAACTACTGGCCAAAGATGTTCCAGATG...TTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCAGGGCCCAGCTGGGAATaGAGAAAGTTGCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: SRGADPQASLRGSPSQDSGPSWE*RKLQAH
Trigger: GTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCC...TGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp GCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTCCCAGCCTGGAGCTGTaGTTTCCTACCAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: ADPQASLRGSPSQDSQICPSLEL*FPTKMA
Trigger: CGCCATCTTGGTAGGAAATCACAGCTCCAGGCTGGG...ACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTACTGTCTGGAAACCGATaGCGGCTGGCATCGAGCGCC +
Preference number: 4 (lower is better)
Translates to: PSGITQRKSQPRFTDLYVLSGNR*RLASSA
Trigger: GGCGCTCGATGCCAGCCGTCATCGGTTTCCAGACAG...TACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGCCATATCAGCTGTCTTaGTGCTTCTCCATCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GESCRPTCSLDGSHTEPLPYQLS*CFSISS
Trigger: GCTTGAGATGGAGAAGCATCAAGACAGCTGATATGG...CAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCCTGCAGCAGCATGAGTaGCGAATCTTATTCCATTCA +
Preference number: 4 (lower is better)
Translates to: LPSSSASSPLSVHLPSHRLQQHE*RILFHS
Trigger: TGAATGGAATAAGATTCGTCACTCATGCTGCTGCAG...GCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355396.7
ENST00000374263.7
CDS-3UTR TCA 90 bp CCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACGTTTTCTCCTTATGGTaGCTCCTCAGGGATAGCCAC +
Preference number: 4 (lower is better)
Translates to: PAGNGESCRPTCSLDGSHVFSLW*LLRDSH
Trigger: GTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAAC...GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp CCAGGAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTCACAGTCTATTTCTGTaGATGATGTGGCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: PGMGPSWEWRKLQAHMLPHSLFL*MMWHRW
Trigger: CCACCGATGCCACATCATGCACAGAAATAGACTGTG...AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp TCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAATCACGGTGTAGTTGGTaGCTGGGTACAGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: SMSRGADPQASLRGSPSQSRCSW*LGTGLG
Trigger: GCCTAGCCCTGTACCCAGGCACCAACTACACCGTGA...TTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp TTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCTCACGGTGTAGTTGGTaGCTGGGTACAGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: LQSMSRGADPQASLRGSPSRCSW*LGTGLG
Trigger: GCCTAGCCCTGTACCCAGGCACCAACTACACCGTGA...GGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp GAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGTTATTTGCACTGAGTaGCGCTTAGGAGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: EWGPAGNGESCRPTCSLDVICTE*RLGDLS
Trigger: GCTGAGATCTCCTAAGCGGCACTCAGTGCAAATAAC...GTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp GAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTAGTTGCAGGCCCACATaGTCCCTGGACGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: ELTLRHHSEEVPAKIHRSSCRPT*SLDGSH
Trigger: GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACT...AGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp ACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCCATGTTCATGGCAAGTaGCACAGACGTCTAAACCGT +
Preference number: 4 (lower is better)
Translates to: TCPAAVHPPHSVSICHHTHVHGK*HRRLNR
Trigger: ACGGTTTAGACGTCTGTGCCACTTGCCATGAACATG...GGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CCA 90 bp CAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCTGAGACTCTTTGCTGGCATGTaGCATGTTCATGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: QQQCILPTQCPSAITPLRLFAGM*HVHGKW
Trigger: CCACTTGCCATGAACATGCCACATGCCAGCAAAGAG...TCTCAGCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CCA 90 bp ACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCTTCCCTTCTCTTTGCTaGCATGTGGCATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: TCPAAVHPPHSVSICHHTFPSLC*HVACSW
Trigger: CCATGAACATGCCACATGCCAGCAAAGAGAAGGGAA...GGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CCA 90 bp GTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCTGAGAAGGAGAGGTCCCACAGACAAGAGTaGCTCCAAACTGGCACTCAT +
Preference number: 4 (lower is better)
Translates to: VHPPHSVSICHHTAEKERSHRQE*LQTGTH
Trigger: ATGAGTGCCAGTTTGGAGCCACTCTTGTCTGTGGGA...CCTCTCCTTCTCAGCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CCA 90 bp GGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAATCTTGTTGTTGTTTGTaGCTCGATATCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GAQLGMEKVAGPHAPWTESCCCL*LDILPG
Trigger: GCCTGGAAGGATATCGAGCCACAAACAACAACAAGA...TTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp AGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCGCATCGGTGGTCGGGTaGAAAGGTTCAGGTCCATTC +
Preference number: 4 (lower is better)
Translates to: SQCLEELTLRHHSEEVPAASVVG*KGSGPF
Trigger: GAATGGACCTGAACCTTTCCACCCGACCACCGATGC...GGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCTGAGAAGGAGAGGGATTTCCTACCAAGATaGCGTGCCGCATTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: VHPPHSVSICHHTAEKERDFLPR*RAAFLE
Trigger: CTCCAGAAATGCGGCACGCCATCTTGGTAGGAAATC...CCTCTCCTTCTCAGCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CCA 90 bp GTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCTGAGAAGGAGAGGCAAGAAAATGTGCTTTaGAGGGCCAGGGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: VHPPHSVSICHHTAEKERQENVL*RARGST
Trigger: AGTGCTTCCCCTGGCCCTCCAAAGCACATTTTCTTG...CCTCTCCTTCTCAGCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CCA 90 bp AAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGTTCATTGCACAGAACTaGTCCTGTAGCAGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: KVAGPHAPWTEVTRSLCAFIAQN*SCSRED
Trigger: GTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAA...CGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp AGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCTGTCTCCTCACGAACTaGTTCCATAGGGTCCAACCG +
Preference number: 4 (lower is better)
Translates to: SQCLEELTLRHHSEEVPACLLTN*FHRVQP
Trigger: CGGTTGGACCCTATGGAATCAGTTCGTGAGGAGACA...GGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp CCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACAGTCTATTTCTGTaGATGATGTGGCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: PSWEWRKLQAHMLPGRKSHSLFL*MMWHRW
Trigger: CCACCGATGCCACATCATGCACAGAAATAGACTGTG...TGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp TGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCCTACCAAGATGGCGTaGCGCATTTCTGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: CLEELTLRHHSEEVPAKIPTKMA*RISGGL
Trigger: CAACCCTCCAGAAATGCGGCACGCCATCTTGGTAGG...AATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp AAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGAATCACAAGAAAATGTaGTTTGGAGGGCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: KVAGPHAPWTEVTRSLCANHKKM*FGGPGE
Trigger: TTCCCCTGGCCCTCCAAAGCACATTTTCTTGTGATT...CGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp CCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTACCTGCCCAGCAGCAGTaGATCCTCCCCACTCAGTGT +
Preference number: 4 (lower is better)
Translates to: PSGITQRKSQPRFTDLYVPAQQQ*ILPTQC
Trigger: ACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGG...TACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp CTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATTCCTGCACACGGAGCCTCTGTaGGGGCACCTGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LKFIAQNWSCSREDSEFLHTEPL*GHLRSC
Trigger: GCAGCTTCTCAGGTGCCCGCACAGAGGCTCCGTGTG...CAGGAATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp GCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTGGGAATGGAGAAAGTTaGAGGCCCACATGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ADPQASLRGSPSQDSQICGNGES*RPTCSL
Trigger: CAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCC...ACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp CTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCTTGCAGAGATTCTCTTaGAGTCAATGTCTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LPSSSASSPLSVHLPSHRLQRFS*SQCLEE
Trigger: CTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAA...GCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000475283.2
CDS-3UTR CCA 90 bp GGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTTTCTGTGCATGATGTaGCATCGGTGGTCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GADPQASLRGSPSQDSQIFLCMM*HRWSGG
Trigger: TCCACCCGACCACCGATGCCACATCATGCACAGAAA...GATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACTATGATATAGCCATCTaGAACCTCAGGAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: PAGNGESCRPTCSLDGSHYDIAI*NLRRGT
Trigger: GGTACCCCTCCTGAGGTTCCAGATGGCTATATCATA...GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCGGCGTGCCGCATTTCTaGAGGGTTGCCACAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LQSMSRGADPQASLRGSPGVPHF*RVATVD
Trigger: ATCAACTGTGGCAACCCTCCAGAAATGCGGCACGCC...GGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTTCACGGTGTAGTTaGTGCCTGGGTACAGGGCTA +
Preference number: 4 (lower is better)
Translates to: GADPQASLRGSPSQDSQICSRCS*CLGTGL
Trigger: TAGCCCTGTACCCAGGCACCAACTACACCGTGAACA...GATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCGCCTGGGAGGTGCTGTaGAGATGTTCACGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: LQSMSRGADPQASLRGSPAWEVL*RCSRCS
Trigger: ACTACACCGTGAACATCTCCACAGCACCTCCCAGGC...GGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp AAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGCTCTGGCCCCAAATGTaGAATAAATACATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KVAGPHAPWTEVTRSLCALWPQM*NKYISS
Trigger: GGAGGAGATGTATTTATTCCACATTTGGGGCCAGAG...CGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp AGCAGGGAAGACTCAGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGAGGCCCACATGCTCCCTaGACGGAAGTCACACGGAGC +
Preference number: 4 (lower is better)
Translates to: SREDSEFLSFLLMVTPQGGPHAP*TEVTRS
Trigger: GCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCC...TCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCTGAGTCTTCCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp TCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGTCTATTTCTGTGCATaGTGTGGCATCGGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: SMSRGADPQASLRGSPSQVYFCA*CGIGGR
Trigger: CCGACCACCGATGCCACATCATGCACAGAAATAGAC...TTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACGAGGGTTGCCACAGTTaGTCTCTTGGCAATGTAATT +
Preference number: 4 (lower is better)
Translates to: PAGNGESCRPTCSLDGSHEGCHS*SLGNVI
Trigger: AATTACATTGCCAAGAGATCAACTGTGGCAACCCTC...GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp AAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGTATTGTTATTTGCACTaGGTGCCGCTTAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: KVAGPHAPWTEVTRSLCAYCYLH*VPLRRS
Trigger: AGATCTCCTAAGCGGCACTCAGTGCAAATAACAATA...CGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp ATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTTTGGGGACTCCCATGTaGCCAGGCCTGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ITQRKSQPRFTDLYVAFGLGTPM*PGLCSL
Trigger: CAAGCTGCACAGGCCTGGGCACATGGGAGTCCCCAA...ACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp CTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATTCCTGTTGGGGACTCCCATGTaGCCAGGCCTGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LKFIAQNWSCSREDSEFLLGTPM*PGLCSL
Trigger: CAAGCTGCACAGGCCTGGGCACATGGGAGTCCCCAA...CAGGAATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp AGCAGGGAAGACTCAGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGACGAGCGCCTGGGAGGTaGTGTGGAGATGTTCACGGT +
Preference number: 4 (lower is better)
Translates to: SREDSEFLSFLLMVTPQGRAPGR*CGDVHG
Trigger: ACCGTGAACATCTCCACAGCACCTCCCAGGCGCTCG...TCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCTGAGTCTTCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp TGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGCGAGCGCCTGGGAGGTaGTGTGGAGATGTTCACGGT +
Preference number: 4 (lower is better)
Translates to: CTSGVSSSLHRTGPVAGKRAPGR*CGDVHG
Trigger: ACCGTGAACATCTCCACAGCACCTCCCAGGCGCTCG...CTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp GTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTCACACGGAGCCTCTGTaGGGGCACCTGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VPAKIHRSVCSLRSISQCHTEPL*GHLRSC
Trigger: GCAGCTTCTCAGGTGCCCGCACAGAGGCTCCGTGTG...ACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp GGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGATTGCATCAAAGCAATaGTGCCTAACAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: GESCRPTCSLDGSHTEPLIASKQ*CLTDTA
Trigger: TGCTGTGTCTGTTAGGCAGCATTGCTTTGATGCAAT...CAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp CCAGGAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTTTCAGGTCCATTCCTTaGCAAGTATCCATCCATACA +
Preference number: 4 (lower is better)
Translates to: PGMGPSWEWRKLQAHMLPFRSIP*QVSIHT
Trigger: TGTATGGATGGATACTTGCCAAGGAATGGACCTGAA...AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCATGATGTGGCATCGGTaGTCGGGTGGAAAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: LQSMSRGADPQASLRGSPMMWHR*SGGKVQ
Trigger: CTGAACCTTTCCACCCGACCACCGATGCCACATCAT...GGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp ACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCCCACAGTTGATCTCTTaGCAATGTAATTTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TCPAAVHPPHSVSICHHTPQLIS*QCNFGD
Trigger: GTCCCCAAAATTACATTGCCAAGAGATCAACTGTGG...GGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CCA 90 bp TTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCTGTTCACGGTGTAGTTaGTGCCTGGGTACAGGGCTA +
Preference number: 4 (lower is better)
Translates to: LQSMSRGADPQASLRGSPCSRCS*CLGTGL
Trigger: TAGCCCTGTACCCAGGCACCAACTACACCGTGAACA...GGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTTCAACTTCAGCTGTCTaGAAACCGATGACGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CLEELTLRHHSEEVPAKISTSAV*KPMTAG
Trigger: GCCAGCCGTCATCGGTTTCCAGACAGCTGAAGTTGA...AATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAATCAACTTCAGCTGTCTaGAAACCGATGACGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SMSRGADPQASLRGSPSQSTSAV*KPMTAG
Trigger: GCCAGCCGTCATCGGTTTCCAGACAGCTGAAGTTGA...TTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CCAGGAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGTCTGTTTTACTGCTaGGGGAGTTGCTATTGTTAT +
Preference number: 4 (lower is better)
Translates to: PGMGPSWEWRKLQAHMLPGLFYC*GSCYCY
Trigger: ATAACAATAGCAACTCCCCCAGCAGTAAAACAGACC...AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTGGCCCACATGCTCCCTaGACGGAAGTCACACGGAGC +
Preference number: 4 (lower is better)
Translates to: VPAKIHRSVCSLRSISQCGPHAP*TEVTRS
Trigger: GCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCC...ACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp TGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAACGTATAATTTCCTATaGTATAGCCATCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: WGPAGNGESCRPTCSLDGTYNFL*YSHLEP
Trigger: AGGTTCCAGATGGCTATATCATAGGAAATTATACGT...TCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp AGCAGGGAAGACTCAGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGACCCAGCCTGGAGCTGTaGTTTCCTACCAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: SREDSEFLSFLLMVTPQGPSLEL*FPTKMA
Trigger: CGCCATCTTGGTAGGAAATCACAGCTCCAGGCTGGG...TCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCTGAGTCTTCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACTTGGTACATGTGTTCTaGTCCAACTTTCCTAGAACG +
Preference number: 4 (lower is better)
Translates to: PAGNGESCRPTCSLDGSHLVHVF*SNFPRT
Trigger: CGTTCTAGGAAAGTTGGATCAGAACACATGTACCAA...GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCATGGGCAAATTCCTTCTaGTACCATCTCTGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: SRGADPQASLRGSPSQDSWANSF*YHLWPQ
Trigger: TTGGGGCCAGAGATGGTATCAGAAGGAATTTGCCCA...TGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTTGGGCAAATTCCTTCTaGTACCATCTCTGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: CLEELTLRHHSEEVPAKIWANSF*YHLWPQ
Trigger: TTGGGGCCAGAGATGGTATCAGAAGGAATTTGCCCA...AATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGACAGAGCCCGGAGACTaGCATTGTAGTTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: SGVSSSLHRTGPVAGKTQTEPGD*HCSWYP
Trigger: CGGGTACCAACTACAATGTCAGTCTCCGGGCTCTGT...CTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp AGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCATGTGCCCAGGCCTGTaGAGCTTGAAACTGTATCTT +
Preference number: 4 (lower is better)
Translates to: SQCLEELTLRHHSEEVPAMCPGL*SLKLYL
Trigger: AAGATACAGTTTCAAGCTGCACAGGCCTGGGCACAT...GGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp TTGCAGAGATTCTCTTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACCCTACCAAGATGGCGTaGCGCATTTCTGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LQRFSCSQCLEELTLRHHPTKMA*RISGGL
Trigger: CAACCCTCCAGAAATGCGGCACGCCATCTTGGTAGG...GTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp CAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGCCTACCAAGATGGCGTaGCGCATTTCTGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: QCTSGVSSSLHRTGPVAGPTKMA*RISGGL
Trigger: CAACCCTCCAGAAATGCGGCACGCCATCTTGGTAGG...CCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp CCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACGTTGCTATTGTTATTTaGACTGAGTGCCGCTTAGGA +
Preference number: 4 (lower is better)
Translates to: PAGNGESCRPTCSLDGSHVAIVI*TECRLG
Trigger: TCCTAAGCGGCACTCAGTGCAAATAACAATAGCAAC...GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp GGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATAGCTGCCAGAACACCTaGCCAGCAGCAGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: GVSSSLHRTGPVAGKTQNSCQNT*PAAVHP
Trigger: AGGATGCACTGCTGCTGGGCAGGTGTTCTGGCAGCT...ATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp TTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCCTCTTTGCTGGCATGTaGCATGTTCATGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LQSMSRGADPQASLRGSPLFAGM*HVHGKW
Trigger: CCACTTGCCATGAACATGCCACATGCCAGCAAAGAG...GGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp ACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCAGAGTGGCTCCAAACTaGCACTCATTTTTATCAACA +
Preference number: 4 (lower is better)
Translates to: TCPAAVHPPHSVSICHHTRVAPN*HSFLST
Trigger: TGTTGATAAAAATGAGTGCCAGTTTGGAGCCACTCT...GGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CCA 90 bp TTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCTCCCACAGACAAGAGTaGCTCCAAACTGGCACTCAT +
Preference number: 4 (lower is better)
Translates to: LQSMSRGADPQASLRGSPSHRQE*LQTGTH
Trigger: ATGAGTGCCAGTTTGGAGCCACTCTTGTCTGTGGGA...GGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp AGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCTTGTGGCAAGATGTGTaGTTCCCACAGACAAGAGTG +
Preference number: 4 (lower is better)
Translates to: SQCLEELTLRHHSEEVPALWQDV*FPQTRV
Trigger: CACTCTTGTCTGTGGGAACCACACATCTTGCCACAA...GGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TTGCAGAGATTCTCTTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACGCCTGGGAGGTGCTGTaGAGATGTTCACGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: LQRFSCSQCLEELTLRHHAWEVL*RCSRCS
Trigger: ACTACACCGTGAACATCTCCACAGCACCTCCCAGGC...GTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp ACACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCCAGAACGGTAAATTaGTACATGTGTTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: TPAQQQCILPTQCPSAITPRTVN*YMCSDP
Trigger: TGGATCAGAACACATGTACCAATTTACCGTTCTGGG...TGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CCA 90 bp AATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTCTGGCCCCAAATGTaGAATAAATACATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NGESCRPTCSLDGSHTEPLWPQM*NKYISS
Trigger: GGAGGAGATGTATTTATTCCACATTTGGGGCCAGAG...AGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCAGGGCCCAGCTGGGAATaGAGAAAGTTGCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: EEVPAKIHRSVCSLRSISGPSWE*RKLQAH
Trigger: GTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCC...TGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp TCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGGGAATGGGGCCCAGCTaGGAATGGAGAAAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SGVSSSLHRTGPVAGKTQGMGPS*EWRKLQ
Trigger: CTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCC...CTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp ACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAAGTGTGTCCCCTGAGTTaGCCCTGTGGATATGCAGCC +
Preference number: 4 (lower is better)
Translates to: TQRKSQPRFTDLYVAFGQVCPLS*PCGYAA
Trigger: GGCTGCATATCCACAGGGCCAACTCAGGGGACACAC...TTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374264.6
CDS-3UTR TCA 90 bp TCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGCATTCAAAGCTCCCATaGGTGTTCACGCATCGCCCT +
Preference number: 4 (lower is better)
Translates to: SGVSSSLHRTGPVAGKTQHSKLP*VFTHRP
Trigger: AGGGCGATGCGTGAACACTCATGGGAGCTTTGAATG...CTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTCCCAGCCTGGAGCTGTaGTTTCCTACCAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: VPAKIHRSVCSLRSISQCPSLEL*FPTKMA
Trigger: CGCCATCTTGGTAGGAAATCACAGCTCCAGGCTGGG...ACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CACTCAGTGTCCATCTGCCATCACACCGCTGAGAAGGAGAGGAATGTGAGAATGCTGTGCAAACAGAAGTaGTCTTTCCTCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: HSVSICHHTAEKERNVRMLCKQK*SFLQGS
Trigger: AGAGCCCTGGAGGAAAGATCACTTCTGTTTGCACAG...CATTCTCACATTCCTCTCCTTCTCAGCGGTGTGATGGCAGATGGACACTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR TCA 90 bp TTGCAGAGATTCTCTTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTGTCTCCTCACGAACTaGTTCCATAGGGTCCAACCG +
Preference number: 4 (lower is better)
Translates to: LQRFSCSQCLEELTLRHHCLLTN*FHRVQP
Trigger: CGGTTGGACCCTATGGAATCAGTTCGTGAGGAGACA...GTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGCTGCCATCACACCGCTaGGAAGGAGAGGAATGTGAG +
Preference number: 4 (lower is better)
Translates to: CTSGVSSSLHRTGPVAGKLPSHR*EGEECE
Trigger: CTCACATTCCTCTCCTTCTCAGCGGTGTGATGGCAG...CTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp AGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAAATCGCCCTCCATGCCTaGACAGGCCAGAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: RSLKFIAQNWSCSREDSEIALHA*TGQKLH
Trigger: GTGAAGTTTCTGGCCTGTGCAGGCATGGAGGGCGAT...TTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp AGCAGGGAAGACTCAGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGAATCGCCCTCCATGCCTaGACAGGCCAGAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: SREDSEFLSFLLMVTPQGIALHA*TGQKLH
Trigger: GTGAAGTTTCTGGCCTGTGCAGGCATGGAGGGCGAT...TCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCTGAGTCTTCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp TGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAATGTGCCCAGGCCTGTaGAGCTTGAAACTGTATCTT +
Preference number: 4 (lower is better)
Translates to: CSQCLEELTLRHHSEEVPMCPGL*SLKLYL
Trigger: AAGATACAGTTTCAAGCTGCACAGGCCTGGGCACAT...TGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp CCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACACGAGCGCCTGGGAGGTaGTGTGGAGATGTTCACGGT +
Preference number: 4 (lower is better)
Translates to: PAKIHRSVCSLRSISQCTRAPGR*CGDVHG
Trigger: ACCGTGAACATCTCCACAGCACCTCCCAGGCGCTCG...TGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp GCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTGTTATTTGCACTGAGTaGCGCTTAGGAGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: ADPQASLRGSPSQDSQICVICTE*RLGDLS
Trigger: GCTGAGATCTCCTAAGCGGCACTCAGTGCAAATAAC...ACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp GAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGTACTGTTTCTAAAGTaGTTGAAACATTTGCCTACG +
Preference number: 4 (lower is better)
Translates to: ESCRPTCSLDGSHTEPLCVLFLK*LKHLPT
Trigger: CGTAGGCAAATGTTTCAAGCACTTTAGAAACAGTAC...GCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp TCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACATGTTCATGGCAAGTaGCACAGACGTCTAAACCGT +
Preference number: 4 (lower is better)
Translates to: SRGADPQASLRGSPSQDSHVHGK*HRRLNR
Trigger: ACGGTTTAGACGTCTGTGCCACTTGCCATGAACATG...TGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACCCCCCGGGGGTGTTGTaGCAAGATGTGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: CSLRSISQCTSGVSSSLHPPGVL*QDVWFP
Trigger: TGGGAACCACACATCTTGCCACAACACCCCCGGGGG...GTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTCTTGTTGTTGTTTGTaGCTCGATATCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GADPQASLRGSPSQDSQISCCCL*LDILPG
Trigger: GCCTGGAAGGATATCGAGCCACAAACAACAACAAGA...GATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGCATCGAGCGCCTaGGAGGTGCTGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: AFGQYHSVHQESQVHCTELASSA*EVLWRC
Trigger: ACATCTCCACAGCACCTCCCAGGCGCTCGATGCCAG...TTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGAAACCGATGACGGCTaGCATCGAGCGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FGQYHSVHQESQVHCTELETDDG*HRAPGR
Trigger: CCTCCCAGGCGCTCGATGCCAGCCGTCATCGGTTTC...CAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATGAAACCGATGACGGCTaGCATCGAGCGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LYVAFGQYHSVHQESQVHETDDG*HRAPGR
Trigger: CCTCCCAGGCGCTCGATGCCAGCCGTCATCGGTTTC...ATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCCATCTGGAACATCTTTaGCCAGTAGTTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LQSMSRGADPQASLRGSPHLEHL*PVVLQP
Trigger: TGGCTGCAGAACTACTGGCCAAAGATGTTCCAGATG...GGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp AATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTGGCCCACATGCTCCCTaGACGGAAGTCACACGGAGC +
Preference number: 4 (lower is better)
Translates to: NITVYIRSLKFIAQNWSCGPHAP*TEVTRS
Trigger: GCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCC...ACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp CCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACAGGGCCCAGCTGGGAATaGAGAAAGTTGCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PAKIHRSVCSLRSISQCTGPSWE*RKLQAH
Trigger: GTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCC...TGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR CAA 72 bp TCCCAGTTCCTGGAGCCTTCTTGGTGGGGTAGCTCTTaGTATAATTCCATAAGCTCCCATCCACTCACCCTC +
Preference number: 4 (lower is better)
Translates to: SQFLEPSWWGSS*YNSISSHPLTL
Trigger: GAGGGTGAGTGGATGGGAGCTTATGGAATTATACAAAGAGCTACCCCACCAAGAAGGCTCCAGGAACTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475283.2
CDS-3UTR TCA 90 bp TGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCATTTTTATCAACACACTaGGTCCTCCCGTTCCCTACA +
Preference number: 4 (lower is better)
Translates to: CSQCLEELTLRHHSEEVPFLSTH*VLPFPT
Trigger: TGTAGGGAACGGGAGGACTCAGTGTGTTGATAAAAA...TGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTTTTTTATCAACACACTaGGTCCTCCCGTTCCCTACA +
Preference number: 4 (lower is better)
Translates to: ADPQASLRGSPSQDSQICFLSTH*VLPFPT
Trigger: TGTAGGGAACGGGAGGACTCAGTGTGTTGATAAAAA...ACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp ACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAACATTCAAAGCTCCCATaGGTGTTCACGCATCGCCCT +
Preference number: 4 (lower is better)
Translates to: TQRKSQPRFTDLYVAFGQHSKLP*VFTHRP
Trigger: AGGGCGATGCGTGAACACTCATGGGAGCTTTGAATG...TTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp ACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAAGTCTATTTCTGTGCATaGTGTGGCATCGGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: TQRKSQPRFTDLYVAFGQVYFCA*CGIGGR
Trigger: CCGACCACCGATGCCACATCATGCACAGAAATAGAC...TTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTTGGTACATGTGTTCTaGTCCAACTTTCCTAGAACG +
Preference number: 4 (lower is better)
Translates to: GADPQASLRGSPSQDSQILVHVF*SNFPRT
Trigger: CGTTCTAGGAAAGTTGGATCAGAACACATGTACCAA...GATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATGCCAGATACCACCTCTaGCCCAGAACGGTAAATTGG +
Preference number: 4 (lower is better)
Translates to: GVSSSLHRTGPVAGKTQNARYHL*PRTVNW
Trigger: CCAATTTACCGTTCTGGGTCAGAGGTGGTATCTGGC...ATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTTTAAACGATGTTGCATaGGAAAAGTTAGCCAGATAC +
Preference number: 4 (lower is better)
Translates to: EKVAGPHAPWTEVTRSLCLNDVA*EKLARY
Trigger: GTATCTGGCTAACTTTTCTCATGCAACATCGTTTAA...ACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCTGAGATTAAACGATGTTGCATaGGAAAAGTTAGCCAGATAC +
Preference number: 4 (lower is better)
Translates to: QQQCILPTQCPSAITPLRLNDVA*EKLARY
Trigger: GTATCTGGCTAACTTTTCTCATGCAACATCGTTTAA...TCTCAGCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR TCA 90 bp AATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTCTCTGTGCGGGCACCTaGGAAGCTGCCAGAACACCT +
Preference number: 4 (lower is better)
Translates to: NITVYIRSLKFIAQNWSCLCAGT*EAARTP
Trigger: AGGTGTTCTGGCAGCTTCTCAGGTGCCCGCACAGAG...ACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp GAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACTGCAGCAGCATGAGTaGCGAATCTGTGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: EEVPAKIHRSVCSLRSISLQQHE*RICVSP
Trigger: AGGGGACACACAGATTCGTCACTCATGCTGCTGCAG...TGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374264.6
CDS-3UTR GCA 90 bp ACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCCTACAAATCCATAGTTaGAAATACAGATCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TCPAAVHPPHSVSICHHTLQIHS*KYRSSS
Trigger: GGAAGAAGATCTGTATTTGCAACTATGGATTTGTAG...GGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR GCA 90 bp GAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCAATCGCCCTCCATGCCTaGACAGGCCAGAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: EEVPAKIHRSVCSLRSISIALHA*TGQKLH
Trigger: GTGAAGTTTCTGGCCTGTGCAGGCATGGAGGGCGAT...TGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp AGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTAACGCATCGCCCTCCATaGCTGCACAGGCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: RIPEFSPYGDSSGIATILTHRPP*LHRPET
Trigger: AGTTTCTGGCCTGTGCAGGCATGGAGGGCGATGCGT...TAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp CACTCAGTGTCCATCTGCCATCACACCGCTGAGAAGGAGAGGAATGTGAGAATGATGTGCCCAGGCCTGTaGAGCTTGAAACTGTATCTT +
Preference number: 4 (lower is better)
Translates to: HSVSICHHTAEKERNVRMMCPGL*SLKLYL
Trigger: AAGATACAGTTTCAAGCTGCACAGGCCTGGGCACAT...CATTCTCACATTCCTCTCCTTCTCAGCGGTGTGATGGCAGATGGACACTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR GCA 90 bp TTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGTTGGGGACTCCCATGTaGCCAGGCCTGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: FGQYHSVHQESQVHCTELLGTPM*PGLCSL
Trigger: CAAGCTGCACAGGCCTGGGCACATGGGAGTCCCCAA...CAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp CCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCAGAAGTTAAACGATGTTaGATGAGAAAAGTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSWEWRKLQAHMLPGRKSEVKRC*MRKVSQ
Trigger: CTGGCTAACTTTTCTCATGCAACATCGTTTAACTTC...TGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp GTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCCTGCCCAGCAGCAGTaGATCCTCCCCACTCAGTGT +
Preference number: 4 (lower is better)
Translates to: VCSLRSISQCTSGVSSSLPAQQQ*ILPTQC
Trigger: ACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGG...CAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp TTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGCCTGCCCAGCAGCAGTaGATCCTCCCCACTCAGTGT +
Preference number: 4 (lower is better)
Translates to: FGQYHSVHQESQVHCTELPAQQQ*ILPTQC
Trigger: ACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGG...CAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp CCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACAAGCTGCCAGAACACCTaGCCAGCAGCAGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: PAKIHRSVCSLRSISQCTSCQNT*PAAVHP
Trigger: AGGATGCACTGCTGCTGGGCAGGTGTTCTGGCAGCT...TGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp CATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGCTCTTTGCTGGCATGTaGCATGTTCATGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: HHSEEVPAKIHRSVCSLRLFAGM*HVHGKW
Trigger: CCACTTGCCATGAACATGCCACATGCCAGCAAAGAG...CCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGCCCCCGGGGGTGTTGTaGCAAGATGTGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: PRFTDLYVAFGQYHSVHQPPGVL*QDVWFP
Trigger: TGGGAACCACACATCTTGCCACAACACCCCCGGGGG...CTGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp AGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACGCATCGGTGGTCGGGTaGAAAGGTTCAGGTCCATTC +
Preference number: 4 (lower is better)
Translates to: RKSQPRFTDLYVAFGQYHASVVG*KGSGPF
Trigger: GAATGGACCTGAACCTTTCCACCCGACCACCGATGC...GTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp AGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAAATGATGTGGCATCGGTaGTCGGGTGGAAAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: RSLKFIAQNWSCSREDSEMMWHR*SGGKVQ
Trigger: CTGAACCTTTCCACCCGACCACCGATGCCACATCAT...TTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACACCACACCGCCCAGCCTaGAGCTGTGATTTCCTACCA +
Preference number: 4 (lower is better)
Translates to: PAKIHRSVCSLRSISQCTPHRPA*SCDFLP
Trigger: TGGTAGGAAATCACAGCTCCAGGCTGGGCGGTGTGG...TGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp AGCAGGGAAGACTCAGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATGTTCACGGTGTAGTTaGTGCCTGGGTACAGGGCTA +
Preference number: 4 (lower is better)
Translates to: SREDSEFLSFLLMVTPQGCSRCS*CLGTGL
Trigger: TAGCCCTGTACCCAGGCACCAACTACACCGTGAACA...TCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCTGAGTCTTCCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATTCCTGTCAACTTCAGCTGTCTaGAAACCGATGACGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LKFIAQNWSCSREDSEFLSTSAV*KPMTAG
Trigger: GCCAGCCGTCATCGGTTTCCAGACAGCTGAAGTTGA...CAGGAATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCCCCAGAACGGTAAATTaGTACATGTGTTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: GADPQASLRGSPSQDSQIPRTVN*YMCSDP
Trigger: TGGATCAGAACACATGTACCAATTTACCGTTCTGGG...GATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCGGTCTGTTTTACTGCTaGGGGAGTTGCTATTGTTAT +
Preference number: 4 (lower is better)
Translates to: GADPQASLRGSPSQDSQIGLFYC*GSCYCY
Trigger: ATAACAATAGCAACTCCCCCAGCAGTAAAACAGACC...GATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGCAAGAAAATGTGCTTTaGAGGGCCAGGGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: SGVSSSLHRTGPVAGKTQQENVL*RARGST
Trigger: AGTGCTTCCCCTGGCCCTCCAAAGCACATTTTCTTG...CTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TTGCAGAGATTCTCTTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACCAAGAAAATGTGCTTTaGAGGGCCAGGGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: LQRFSCSQCLEELTLRHHQENVL*RARGST
Trigger: AGTGCTTCCCCTGGCCCTCCAAAGCACATTTTCTTG...GTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTGGAATGGGGCCCAGCTaGGAATGGAGAAAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VPAKIHRSVCSLRSISQCGMGPS*EWRKLQ
Trigger: CTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCC...ACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp GAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCATGTCTCCTCACGAACTaGTTCCATAGGGTCCAACCG +
Preference number: 4 (lower is better)
Translates to: EEVPAKIHRSVCSLRSISCLLTN*FHRVQP
Trigger: CGGTTGGACCCTATGGAATCAGTTCGTGAGGAGACA...TGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp AGCAGGGAAGACTCAGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATGTCTGTGGTCAAGTTaGCTGTCTCCTCACGAACTG +
Preference number: 4 (lower is better)
Translates to: SREDSEFLSFLLMVTPQGCLWSS*LSPHEL
Trigger: CAGTTCGTGAGGAGACAGTCAACTTGACCACAGACA...TCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCTGAGTCTTCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTTTGGTACATGTGTTCTaGTCCAACTTTCCTAGAACG +
Preference number: 4 (lower is better)
Translates to: ELTLRHHSEEVPAKIHRSLVHVF*SNFPRT
Trigger: CGTTCTAGGAAAGTTGGATCAGAACACATGTACCAA...AGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATGCCAGATACCACCTCTaGCCCAGAACGGTAAATTGG +
Preference number: 4 (lower is better)
Translates to: QRKSQPRFTDLYVAFGQYARYHL*PRTVNW
Trigger: CCAATTTACCGTTCTGGGTCAGAGGTGGTATCTGGC...ATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCATCCTGAAATGTTACTaGTGGTCTGTTTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: GADPQASLRGSPSQDSQIILKCY*WSVLLL
Trigger: CAGCAGTAAAACAGACCATCAGTAACATTTCAGGAT...GATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCCCATCTCACTGGCTTTCCTCAGTCTaGGGCGTGGTAGAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SMTSFIKSNSSPNLSPSHWLSSV*GVVEVL
Trigger: GAGGACCTCTACCACGCCTCAGACTGAGGAAAGCCA...GTGAGATGGGCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp AGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACCCATCTGCAGCAGCATaGGTGACGAATCTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: RKSQPRFTDLYVAFGQYHPSAAA*VTNLCV
Trigger: GACACACAGATTCGTCACTCATGCTGCTGCAGATGG...GTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374264.6
CDS-3UTR TCA 90 bp GTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTCTGCAGCAGCATGAGTaGCGAATCTTTCACCTGAGC +
Preference number: 4 (lower is better)
Translates to: VPAKIHRSVCSLRSISQCLQQHE*RIFHLS
Trigger: GCTCAGGTGAAAGATTCGTCACTCATGCTGCTGCAG...ACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374270.8
CDS-3UTR TCA 90 bp GGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATCCATCTGCAGCAGCATaGGTGACGAATCTTTCACCT +
Preference number: 4 (lower is better)
Translates to: GVSSSLHRTGPVAGKTQNPSAAA*VTNLSP
Trigger: AGGTGAAAGATTCGTCACTCATGCTGCTGCAGATGG...ATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374270.8
CDS-3UTR TCA 90 bp AGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACCCATCTGCAGCAGCATaGGTGACGAATGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: RKSQPRFTDLYVAFGQYHPSAAA*VTNGVE
Trigger: CTCAACACCATTCGTCACTCATGCTGCTGCAGATGG...GTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475283.2
CDS-3UTR GCA 90 bp ACACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACTACAAATCCATAGTTaGAAATACAGATCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TPAQQQCILPTQCPSAITLQIHS*KYRSSS
Trigger: GGAAGAAGATCTGTATTTGCAACTATGGATTTGTAG...TGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR GCA 90 bp CGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTATCGCCCTCCATGCCTaGACAGGCCAGAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: RSISQCTSGVSSSLHRTGIALHA*TGQKLH
Trigger: GTGAAGTTTCTGGCCTGTGCAGGCATGGAGGGCGAT...ACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp TTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGTCACGGTGTAGTTGGTaGCTGGGTACAGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: FGQYHSVHQESQVHCTELSRCSW*LGTGLG
Trigger: GCCTAGCCCTGTACCCAGGCACCAACTACACCGTGA...CAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp GCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAAGTTGCAGGCCCACATaGTCCCTGGACGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: AKIHRSVCSLRSISQCTSSCRPT*SLDGSH
Trigger: GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACT...TGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp ATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTAAATAGTTGCAGGCCCACATaGTCCCTGGACGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: IPEFSPYGDSSGIATILNSCRPT*SLDGSH
Trigger: GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACT...ATTTAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp GGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCGGGAATGGAGAAAGTTaGAGGCCCACATGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GQYHSVHQESQVHCTELVGNGES*RPTCSL
Trigger: CAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCC...GACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp TCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCATTGCAGAGATTCTCTTaGAGTCAATGTCTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SRGADPQASLRGSPSQDSLQRFS*SQCLEE
Trigger: CTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAA...TGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp GAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTATTGCATCAAAGCAATaGTGCCTAACAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: ELTLRHHSEEVPAKIHRSIASKQ*CLTDTA
Trigger: TGCTGTGTCTGTTAGGCAGCATTGCTTTGATGCAAT...AGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp CAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGTTCCCTTCTCTTTGCTaGCATGTGGCATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: QCTSGVSSSLHRTGPVAGFPSLC*HVACSW
Trigger: CCATGAACATGCCACATGCCAGCAAAGAGAAGGGAA...CCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTATTGTGGCAAGATGTGTaGTTCCCACAGACAAGAGTG +
Preference number: 4 (lower is better)
Translates to: PSGITQRKSQPRFTDLYVLWQDV*FPQTRV
Trigger: CACTCTTGTCTGTGGGAACCACACATCTTGCCACAA...TACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCATTCAGGTCCATTCCTTaGCAAGTATCCATCCATACA +
Preference number: 4 (lower is better)
Translates to: CSQCLEELTLRHHSEEVPFRSIP*QVSIHT
Trigger: TGTATGGATGGATACTTGCCAAGGAATGGACCTGAA...TGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACAGCATCGGTGGTCGGGTaGAAAGGTTCAGGTCCATTC +
Preference number: 4 (lower is better)
Translates to: PAKIHRSVCSLRSISQCTASVVG*KGSGPF
Trigger: GAATGGACCTGAACCTTTCCACCCGACCACCGATGC...TGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp AGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACTTTCTGTGCATGATGTaGCATCGGTGGTCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RKSQPRFTDLYVAFGQYHFLCMM*HRWSGG
Trigger: TCCACCCGACCACCGATGCCACATCATGCACAGAAA...GTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATGATTTCCTACCAAGATaGCGTGCCGCATTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GVSSSLHRTGPVAGKTQNDFLPR*RAAFLE
Trigger: CTCCAGAAATGCGGCACGCCATCTTGGTAGGAAATC...ATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCCACACCGCCCAGCCTaGAGCTGTGATTTCCTACCA +
Preference number: 4 (lower is better)
Translates to: VCSLRSISQCTSGVSSSLPHRPA*SCDFLP
Trigger: TGGTAGGAAATCACAGCTCCAGGCTGGGCGGTGTGG...CAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCGGGCCCAGCTGGGAATaGAGAAAGTTGCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PTSLFSFSMTSFIKSNSSGPSWE*RKLQAH
Trigger: GTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCC...GCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp CCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACAGGAATGGGGCCCAGCTaGGAATGGAGAAAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PAKIHRSVCSLRSISQCTGMGPS*EWRKLQ
Trigger: CTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCC...TGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp GTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTCCTGAGTTGGCCCTGTaGATATGCAGCCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: VPAKIHRSVCSLRSISQCPELAL*ICSLRK
Trigger: TTTCCTGAGGCTGCATATCCACAGGGCCAACTCAGG...ACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374264.6
CDS-3UTR TCA 90 bp TCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGTTTTTATCAACACACTaGGTCCTCCCGTTCCCTACA +
Preference number: 4 (lower is better)
Translates to: SGVSSSLHRTGPVAGKTQFLSTH*VLPFPT
Trigger: TGTAGGGAACGGGAGGACTCAGTGTGTTGATAAAAA...CTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp AGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAGTCTATTTCTGTGCATaGTGTGGCATCGGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: SLRSISQCTSGVSSSLHRVYFCA*CGIGGR
Trigger: CCGACCACCGATGCCACATCATGCACAGAAATAGAC...TCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp AGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACCAGGCCTGTGCAGCTTaGAACTGTATCTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RKSQPRFTDLYVAFGQYHQACAA*NCIFWN
Trigger: GTTCCAGAAGATACAGTTTCAAGCTGCACAGGCCTG...GTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTCTGTGCAAACAGAAGTaGTCTTTCCTCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VPAKIHRSVCSLRSISQCLCKQK*SFLQGS
Trigger: AGAGCCCTGGAGGAAAGATCACTTCTGTTTGCACAG...ACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTCTGTGGTCAAGTTaGCTGTCTCCTCACGAACTG +
Preference number: 4 (lower is better)
Translates to: EVPAKIHRSVCSLRSISQCLWSS*LSPHEL
Trigger: CAGTTCGTGAGGAGACAGTCAACTTGACCACAGACA...CTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp AATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTACAGAGCCCGGAGACTaGCATTGTAGTTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: NITVYIRSLKFIAQNWSCTEPGD*HCSWYP
Trigger: CGGGTACCAACTACAATGTCAGTCTCCGGGCTCTGT...ACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCTGGCTTTCCTCAGTCTaGGGCGTGGTAGAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PTSLFSFSMTSFIKSNSSWLSSV*GVVEVL
Trigger: GAGGACCTCTACCACGCCTCAGACTGAGGAAAGCCA...GCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp TCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAATTGCTTAAAGTAGTATaGATTGGGTTCTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: SMSRGADPQASLRGSPSQLLKVV*IGFWSP
Trigger: TGGTGACCAGAACCCAATTCATACTACTTTAAGCAA...TTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475283.2
CDS-3UTR GCA 90 bp GCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCACCAACACCCGCCATCTaGAGCAGCATGAGTGACGAA +
Preference number: 4 (lower is better)
Translates to: AKIHRSVCSLRSISQCTSPTPAI*SSMSDE
Trigger: TTCGTCACTCATGCTGCTGCAGATGGCGGGTGTTGG...TGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp TTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGCCAACACCCGCCATCTaGAGCAGCATGAGTGACGAA +
Preference number: 4 (lower is better)
Translates to: FGQYHSVHQESQVHCTELPTPAI*SSMSDE
Trigger: TTCGTCACTCATGCTGCTGCAGATGGCGGGTGTTGG...CAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp AGCAGGAAACTTATTGGCATGGCCAGGCTAGTATATTTTCTCATTAGTATATCACACACGGAGCCTCTGTaGGGGCACCTGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SRKLIGMARLVYFLISISHTEPL*GHLRSC
Trigger: GCAGCTTCTCAGGTGCCCGCACAGAGGCTCCGTGTG...TGATATACTAATGAGAAAATATACTAGCCTGGCCATGCCAATAAGTTTCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR GCA 90 bp AATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTGGGAATGGAGAAAGTTaGAGGCCCACATGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: NITVYIRSLKFIAQNWSCGNGES*RPTCSL
Trigger: CAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCC...ACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp GTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGGGGAATGGAGAAAGTTaGAGGCCCACATGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VCSLRSISQCTSGVSSSLGNGES*RPTCSL
Trigger: CAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCC...CAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp GGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATTTCCCTTCTCTTTGCTaGCATGTGGCATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: GVSSSLHRTGPVAGKTQNFPSLC*HVACSW
Trigger: CCATGAACATGCCACATGCCAGCAAAGAGAAGGGAA...ATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CACTCAGTGTCCATCTGCCATCACACCGCTGAGAAGGAGAGGAATGTGAGAATGCCACAGTTGATCTCTTaGCAATGTAATTTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: HSVSICHHTAEKERNVRMPQLIS*QCNFGD
Trigger: GTCCCCAAAATTACATTGCCAAGAGATCAACTGTGG...CATTCTCACATTCCTCTCCTTCTCAGCGGTGTGATGGCAGATGGACACTGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CCA 90 bp GAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCCTGGCATCGAGCGCCTaGGAGGTGCTGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: ETFAYVTVLFFNDLLHKVLASSA*EVLWRC
Trigger: ACATCTCCACAGCACCTCCCAGGCGCTCGATGCCAG...GACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp CAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGCTGGAGCCTTCTTGGTaGGGTAGCTCTTTGTATAAT +
Preference number: 4 (lower is better)
Translates to: QCTSGVSSSLHRTGPVAGLEPSW*GSSLYN
Trigger: ATTATACAAAGAGCTACCCCACCAAGAAGGCTCCAG...CCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475283.2
CDS-3UTR TCA 90 bp ACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATTTTTATCAACACACTaGGTCCTCCCGTTCCCTACA +
Preference number: 4 (lower is better)
Translates to: TQRKSQPRFTDLYVAFGQFLSTH*VLPFPT
Trigger: TGTAGGGAACGGGAGGACTCAGTGTGTTGATAAAAA...TTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGTCTATTTCTGTGCATaGTGTGGCATCGGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: AKIHRSVCSLRSISQCTSVYFCA*CGIGGR
Trigger: CCGACCACCGATGCCACATCATGCACAGAAATAGAC...TGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAACGTATAATTTCCTATaGTATAGCCATCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: SMSRGADPQASLRGSPSQTYNFL*YSHLEP
Trigger: AGGTTCCAGATGGCTATATCATAGGAAATTATACGT...TTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACCTGTGCAAACAGAAGTaGTCTTTCCTCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: CSLRSISQCTSGVSSSLHLCKQK*SFLQGS
Trigger: AGAGCCCTGGAGGAAAGATCACTTCTGTTTGCACAG...GTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCCCATCTCACTGTCTCCTCACGAACTaGTTCCATAGGGTCCAACCG +
Preference number: 4 (lower is better)
Translates to: SMTSFIKSNSSPNLSPSHCLLTN*FHRVQP
Trigger: CGGTTGGACCCTATGGAATCAGTTCGTGAGGAGACA...GTGAGATGGGCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp GCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAATGTCTGTGGTCAAGTTaGCTGTCTCCTCACGAACTG +
Preference number: 4 (lower is better)
Translates to: AFGQYHSVHQESQVHCTECLWSS*LSPHEL
Trigger: CAGTTCGTGAGGAGACAGTCAACTTGACCACAGACA...TTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTTGGTACATGTGTTCTaGTCCAACTTTCCTAGAACG +
Preference number: 4 (lower is better)
Translates to: HHSEEVPAKIHRSVCSLRLVHVF*SNFPRT
Trigger: CGTTCTAGGAAAGTTGGATCAGAACACATGTACCAA...CCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGCCAGATACCACCTCTaGCCCAGAACGGTAAATTGG +
Preference number: 4 (lower is better)
Translates to: PRFTDLYVAFGQYHSVHQARYHL*PRTVNW
Trigger: CCAATTTACCGTTCTGGGTCAGAGGTGGTATCTGGC...CTGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTATATTGTTATTTGCACTaGGTGCCGCTTAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: PSGITQRKSQPRFTDLYVYCYLH*VPLRRS
Trigger: AGATCTCCTAAGCGGCACTCAGTGCAAATAACAATA...TACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TTGCAGAGATTCTCTTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTATTGTTATTTGCACTaGGTGCCGCTTAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: LQRFSCSQCLEELTLRHHYCYLH*VPLRRS
Trigger: AGATCTCCTAAGCGGCACTCAGTGCAAATAACAATA...GTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATGGAAGCACTAACACCTaGTATGAACTGATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GVSSSLHRTGPVAGKTQNGSTNT*YELIGP
Trigger: TGGACCAATCAGTTCATATCAGGTGTTAGTGCTTCC...ATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTAATCTGTGTGTCCCCTaGGTTGGCCCTGTGGATATG +
Preference number: 4 (lower is better)
Translates to: FTDLYVAFGQYHSVHQESNLCVP*VGPVDM
Trigger: CATATCCACAGGGCCAACTCAGGGGACACACAGATT...AGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374264.6
CDS-3UTR GCA 90 bp TCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATACACAGTCTATTTCTGTaGATGATGTGGCATCGGTGG +
Preference number: 4 (lower is better)
Translates to: SEEVPAKIHRSVCSLRSIHSLFL*MMWHRW
Trigger: CCACCGATGCCACATCATGCACAGAAATAGACTGTG...TATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp TGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCACTTCTTGAGTTTATTTaGCATCTCACACAGGTATCA +
Preference number: 4 (lower is better)
Translates to: CSQCLEELTLRHHSEEVPLLEFI*HLTQVS
Trigger: TGATACCTGTGTGAGATGGCAAATAAACTCAAGAAG...TGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp TGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGAAGTTAAACGATGTTaGATGAGAAAAGTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: CSQCLEELTLRHHSEEVPEVKRC*MRKVSQ
Trigger: CTGGCTAACTTTTCTCATGCAACATCGTTTAACTTC...TGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp ACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAAAATCACAAGAAAATGTaGTTTGGAGGGCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: TQRKSQPRFTDLYVAFGQNHKKM*FGGPGE
Trigger: TTCCCCTGGCCCTCCAAAGCACATTTTCTTGTGATT...TTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp TCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACAGCTGCCAGAACACCTaGCCAGCAGCAGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: SLFSFSMTSFIKSNSSPNSCQNT*PAAVHP
Trigger: AGGATGCACTGCTGCTGGGCAGGTGTTCTGGCAGCT...GTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR GCA 90 bp GAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGGCATCAAAGCAATGCTaGCTAACAGACACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: EVPAKIHRSVCSLRSISQASKQC*LTDTAG
Trigger: TCCTGCTGTGTCTGTTAGGCAGCATTGCTTTGATGC...CTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR GCA 90 bp CTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATCACCTGAGCCCAAACTaGACAGGAGTGTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LYVAFGQYHSVHQESQVHHLSPN*TGVSSH
Trigger: GTGAGAAGACACTCCTGTGCAGTTTGGGCTCAGGTG...ATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATACATGTTCATGGCAAGTaGCACAGACGTCTAAACCGT +
Preference number: 4 (lower is better)
Translates to: SEEVPAKIHRSVCSLRSIHVHGK*HRRLNR
Trigger: ACGGTTTAGACGTCTGTGCCACTTGCCATGAACATG...TATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCATGTGGCATGTTCATaGCAAGTGGCACAGACGTCT +
Preference number: 4 (lower is better)
Translates to: GQYHSVHQESQVHCTELVHVACS*QVAQTS
Trigger: AGACGTCTGTGCCACTTGCCATGAACATGCCACATG...GACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCCCACAGACAAGAGTaGCTCCAAACTGGCACTCAT +
Preference number: 4 (lower is better)
Translates to: PAKIHRSVCSLRSISQCTSHRQE*LQTGTH
Trigger: ATGAGTGCCAGTTTGGAGCCACTCTTGTCTGTGGGA...TGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTTTGTGGCAAGATGTGTaGTTCCCACAGACAAGAGTG +
Preference number: 4 (lower is better)
Translates to: VPAKIHRSVCSLRSISQCLWQDV*FPQTRV
Trigger: CACTCTTGTCTGTGGGAACCACACATCTTGCCACAA...ACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGATGATGTGGCATCGGTaGTCGGGTGGAAAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: PRFTDLYVAFGQYHSVHQMMWHR*SGGKVQ
Trigger: CTGAACCTTTCCACCCGACCACCGATGCCACATCAT...CTGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTATGATATAGCCATCTaGAACCTCAGGAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: EVPAKIHRSVCSLRSISQYDIAI*NLRRGT
Trigger: GGTACCCCTCCTGAGGTTCCAGATGGCTATATCATA...CTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATATGATATAGCCATCTaGAACCTCAGGAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: SEEVPAKIHRSVCSLRSIYDIAI*NLRRGT
Trigger: GGTACCCCTCCTGAGGTTCCAGATGGCTATATCATA...TATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCCTGGCATCGAGCGCCTaGGAGGTGCTGTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: FSFSMTSFIKSNSSPNLSLASSA*EVLWRC
Trigger: ACATCTCCACAGCACCTCCCAGGCGCTCGATGCCAG...GCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp CAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATTTCATTGCACAGAACTaGTCCTGTAGCAGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: QRKSQPRFTDLYVAFGQYFIAQN*SCSRED
Trigger: GTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAA...ATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp CCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGCTGTGCAAACAGAAGTaGTCTTTCCTCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PRFTDLYVAFGQYHSVHQLCKQK*SFLQGS
Trigger: AGAGCCCTGGAGGAAAGATCACTTCTGTTTGCACAG...CTGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CACTCAGTGTCCATCTGCCATCACACCGCTGAGAAGGAGAGGAATGTGAGAATGTTAAACGATGTTGCATaGGAAAAGTTAGCCAGATAC +
Preference number: 4 (lower is better)
Translates to: HSVSICHHTAEKERNVRMLNDVA*EKLARY
Trigger: GTATCTGGCTAACTTTTCTCATGCAACATCGTTTAA...CATTCTCACATTCCTCTCCTTCTCAGCGGTGTGATGGCAGATGGACACTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR TCA 90 bp GGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCCATATCAGCTGTCTTaGTGCTTCTCCATCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GQYHSVHQESQVHCTELVPYQLS*CFSISS
Trigger: GCTTGAGATGGAGAAGCATCAAGACAGCTGATATGG...GACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp AGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTACCATATCAGCTGTCTTaGTGCTTCTCCATCTCAAGC +
Preference number: 4 (lower is better)
Translates to: RIPEFSPYGDSSGIATILPYQLS*CFSISS
Trigger: GCTTGAGATGGAGAAGCATCAAGACAGCTGATATGG...TAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCGGGTTGTCAGGGAGATaGCCACAGGAAGTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: ETFAYVTVLFFNDLLHKVGLSGR*PQEVPK
Trigger: CTTCGGAACTTCCTGTGGTCATCTCCCTGACAACCC...GACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp GTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTGGAAGCACTAACACCTaGTATGAACTGATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VPAKIHRSVCSLRSISQCGSTNT*YELIGP
Trigger: TGGACCAATCAGTTCATATCAGGTGTTAGTGCTTCC...ACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATGTTTTCTCCTTATGGTaGCTCCTCAGGGATAGCCAC +
Preference number: 4 (lower is better)
Translates to: LYVAFGQYHSVHQESQVHVFSLW*LLRDSH
Trigger: GTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAAC...ATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp ATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTAAATGGTATTTCTTTCACCTaGGCCCAAACTGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: IPEFSPYGDSSGIATILNGISFT*AQTAQE
Trigger: CTCCTGTGCAGTTTGGGCTCAGGTGAAAGAAATACC...ATTTAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374264.6
CDS-3UTR GCA 90 bp GAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCATCCTTCCAGGCAAATaGAATAGAAGCCCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: ETFAYVTVLFFNDLLHKVILPGK*NRSPRG
Trigger: CCCCCGGGGGCTTCTATTGCATTTGCCTGGAAGGAT...GACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR GCA 90 bp TGCTTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATACCTACCAAGATGGCGTaGCGCATTTCTGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: CLKHLPTSLFSFSMTSFIPTKMA*RISGGL
Trigger: CAACCCTCCAGAAATGCGGCACGCCATCTTGGTAGG...TATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR GCA 90 bp TGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACGTTATTTGCACTGAGTaGCGCTTAGGAGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: CSLRSISQCTSGVSSSLHVICTE*RLGDLS
Trigger: GCTGAGATCTCCTAAGCGGCACTCAGTGCAAATAAC...GTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp ACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATTGCAGAGATTCTCTTaGAGTCAATGTCTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TQRKSQPRFTDLYVAFGQLQRFS*SQCLEE
Trigger: CTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAA...TTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR GCA 90 bp CGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTGCATCAAAGCAATGCTaGCTAACAGACACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RSISQCTSGVSSSLHRTGASKQC*LTDTAG
Trigger: TCCTGCTGTGTCTGTTAGGCAGCATTGCTTTGATGC...ACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR GCA 90 bp GCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAAGCATCAAAGCAATGCTaGCTAACAGACACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AFGQYHSVHQESQVHCTEASKQC*LTDTAG
Trigger: TCCTGCTGTGTCTGTTAGGCAGCATTGCTTTGATGC...TTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR GCA 90 bp TGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGATTGCATCAAAGCAATaGTGCCTAACAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: CTSGVSSSLHRTGPVAGKIASKQ*CLTDTA
Trigger: TGCTGTGTCTGTTAGGCAGCATTGCTTTGATGCAAT...CTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp AGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTATTGTGGCAAGATGTGTaGTTCCCACAGACAAGAGTG +
Preference number: 4 (lower is better)
Translates to: RIPEFSPYGDSSGIATILLWQDV*FPQTRV
Trigger: CACTCTTGTCTGTGGGAACCACACATCTTGCCACAA...TAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCTTGTTGTTGTTTGTaGCTCGATATCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SEEVPAKIHRSVCSLRSISCCCL*LDILPG
Trigger: GCCTGGAAGGATATCGAGCCACAAACAACAACAAGA...TATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCGGCGTGCCGCATTTCTaGAGGGTTGCCACAGTTGAT +
Preference number: 4 (lower is better)
Translates to: ETFAYVTVLFFNDLLHKVGVPHF*RVATVD
Trigger: ATCAACTGTGGCAACCCTCCAGAAATGCGGCACGCC...GACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp CTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATGATTTCCTACCAAGATaGCGTGCCGCATTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LYVAFGQYHSVHQESQVHDFLPR*RAAFLE
Trigger: CTCCAGAAATGCGGCACGCCATCTTGGTAGGAAATC...ATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp ATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCCCAGAACGGTAAATTaGTACATGTGTTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: ITQRKSQPRFTDLYVAFGPRTVN*YMCSDP
Trigger: TGGATCAGAACACATGTACCAATTTACCGTTCTGGG...ACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTTTCATTGCACAGAACTaGTCCTGTAGCAGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: RSISQCTSGVSSSLHRTGFIAQN*SCSRED
Trigger: GTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAA...ACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp TGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACTTCATTGCACAGAACTaGTCCTGTAGCAGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: CSLRSISQCTSGVSSSLHFIAQN*SCSRED
Trigger: GTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAA...GTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
3UTR CAA 72 bp TCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATaGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAG +
Preference number: 4 (lower is better)
Translates to: SISQCTSGVSSS*HRTGPVAGKTQ
Trigger: CTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp TCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACCATTCAAAGCTCCCATaGGTGTTCACGCATCGCCCT +
Preference number: 4 (lower is better)
Translates to: SLFSFSMTSFIKSNSSPNHSKLP*VFTHRP
Trigger: AGGGCGATGCGTGAACACTCATGGGAGCTTTGAATG...GTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp AGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTAGAGGGTTGCCACAGTTaGTCTCTTGGCAATGTAATT +
Preference number: 4 (lower is better)
Translates to: RIPEFSPYGDSSGIATILEGCHS*SLGNVI
Trigger: AATTACATTGCCAAGAGATCAACTGTGGCAACCCTC...TAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CACAGCAGGAAACTTATTGGCATGGCCAGGCTAGTATATTTTCTCATTAGTATAGCCAGATACCACCTCTaGCCCAGAACGGTAAATTGG +
Preference number: 4 (lower is better)
Translates to: HSRKLIGMARLVYFLISIARYHL*PRTVNW
Trigger: CCAATTTACCGTTCTGGGTCAGAGGTGGTATCTGGC...TATACTAATGAGAAAATATACTAGCCTGGCCATGCCAATAAGTTTCCTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp TCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGTTAAACGATGTTGCATaGGAAAAGTTAGCCAGATAC +
Preference number: 4 (lower is better)
Translates to: SGVSSSLHRTGPVAGKTQLNDVA*EKLARY
Trigger: GTATCTGGCTAACTTTTCTCATGCAACATCGTTTAA...CTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCGGAAGCACTAACACCTaGTATGAACTGATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GQYHSVHQESQVHCTELVGSTNT*YELIGP
Trigger: TGGACCAATCAGTTCATATCAGGTGTTAGTGCTTCC...GACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp GCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGCAGCAGCATGAGTaGCGAATCTTATTCCATTCA +
Preference number: 4 (lower is better)
Translates to: AFGQYHSVHQESQVHCTELQQHE*RILFHS
Trigger: TGAATGGAATAAGATTCGTCACTCATGCTGCTGCAG...TTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355396.7
ENST00000374263.7
CDS-3UTR TCA 90 bp CTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATCCATCTGCAGCAGCATaGGTGACGAATCTTATTCCA +
Preference number: 4 (lower is better)
Translates to: LYVAFGQYHSVHQESQVHPSAAA*VTNLIP
Trigger: TGGAATAAGATTCGTCACTCATGCTGCTGCAGATGG...ATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATACAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355396.7
ENST00000374263.7
CDS-3UTR TCA 90 bp TGCTTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAGACGAATCTTTCACCTaGGCCCAAACTGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: CLKHLPTSLFSFSMTSFIDESFT*AQTAQE
Trigger: CTCCTGTGCAGTTTGGGCTCAGGTGAAAGATTCGTC...TATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374270.8
CDS-3UTR GCA 90 bp CATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGCTTCTTGAGTTTATTTaGCATCTCACACAGGTATCA +
Preference number: 4 (lower is better)
Translates to: HHSEEVPAKIHRSVCSLRLLEFI*HLTQVS
Trigger: TGATACCTGTGTGAGATGGCAAATAAACTCAAGAAG...CCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp GCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGTTATTTGCACTGAGTaGCGCTTAGGAGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: AKIHRSVCSLRSISQCTSVICTE*RLGDLS
Trigger: GCTGAGATCTCCTAAGCGGCACTCAGTGCAAATAAC...TGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp AGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACGTTGCTATTGTTATTTaGACTGAGTGCCGCTTAGGA +
Preference number: 4 (lower is better)
Translates to: RKSQPRFTDLYVAFGQYHVAIVI*TECRLG
Trigger: TCCTAAGCGGCACTCAGTGCAAATAACAATAGCAAC...GTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp GGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCAATCACAAGAAAATGTaGTTTGGAGGGCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: GQYHSVHQESQVHCTELVNHKKM*FGGPGE
Trigger: TTCCCCTGGCCCTCCAAAGCACATTTTCTTGTGATT...GACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp CTTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAACCAACACCCGCCATCTaGAGCAGCATGAGTGACGAA +
Preference number: 4 (lower is better)
Translates to: LETFAYVTVLFFNDLLHKPTPAI*SSMSDE
Trigger: TTCGTCACTCATGCTGCTGCAGATGGCGGGTGTTGG...TTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR GCA 90 bp TTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGCCAACACCCGCCATCTaGAGCAGCATGAGTGACGAA +
Preference number: 4 (lower is better)
Translates to: LKHLPTSLFSFSMTSFIKPTPAI*SSMSDE
Trigger: TTCGTCACTCATGCTGCTGCAGATGGCGGGTGTTGG...CTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR GCA 90 bp GCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCATTGGCCCTGTGGATATaGAGCCTCAGGAAATTACAG +
Preference number: 4 (lower is better)
Translates to: AKIHRSVCSLRSISQCTSLALWI*SLRKLQ
Trigger: CTGTAATTTCCTGAGGCTGCATATCCACAGGGCCAA...TGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374264.6
CDS-3UTR CCA 90 bp TTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGCATGTTCATGGCAAGTaGCACAGACGTCTAAACCGT +
Preference number: 4 (lower is better)
Translates to: FGQYHSVHQESQVHCTELHVHGK*HRRLNR
Trigger: ACGGTTTAGACGTCTGTGCCACTTGCCATGAACATG...CAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp ACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCACTCTTTGCTGGCATGTaGCATGTTCATGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: TSLFSFSMTSFIKSNSSPLFAGM*HVHGKW
Trigger: CCACTTGCCATGAACATGCCACATGCCAGCAAAGAG...TGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp AGCAGGGAAGACTCAGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGAAGAGTGGCTCCAAACTaGCACTCATTTTTATCAACA +
Preference number: 4 (lower is better)
Translates to: SREDSEFLSFLLMVTPQGRVAPN*HSFLST
Trigger: TGTTGATAAAAATGAGTGCCAGTTTGGAGCCACTCT...TCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCTGAGTCTTCCCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTTCAGGTCCATTCCTTaGCAAGTATCCATCCATACA +
Preference number: 4 (lower is better)
Translates to: EVPAKIHRSVCSLRSISQFRSIP*QVSIHT
Trigger: TGTATGGATGGATACTTGCCAAGGAATGGACCTGAA...CTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCATGATGTGGCATCGGTaGTCGGGTGGAAAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ETFAYVTVLFFNDLLHKVMMWHR*SGGKVQ
Trigger: CTGAACCTTTCCACCCGACCACCGATGCCACATCAT...GACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp TGCTTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATATTTCTGTGCATGATGTaGCATCGGTGGTCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CLKHLPTSLFSFSMTSFIFLCMM*HRWSGG
Trigger: TCCACCCGACCACCGATGCCACATCATGCACAGAAA...TATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp CACAGCAGGAAACTTATTGGCATGGCCAGGCTAGTATATTTTCTCATTAGTATATTTCTGTGCATGATGTaGCATCGGTGGTCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HSRKLIGMARLVYFLISIFLCMM*HRWSGG
Trigger: TCCACCCGACCACCGATGCCACATCATGCACAGAAA...TATACTAATGAGAAAATATACTAGCCTGGCCATGCCAATAAGTTTCCTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp GCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCATATGATATAGCCATCTaGAACCTCAGGAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: AKIHRSVCSLRSISQCTSYDIAI*NLRRGT
Trigger: GGTACCCCTCCTGAGGTTCCAGATGGCTATATCATA...TGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCCACAGTTGATCTCTTaGCAATGTAATTTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QRKSQPRFTDLYVAFGQYPQLIS*QCNFGD
Trigger: GTCCCCAAAATTACATTGCCAAGAGATCAACTGTGG...ATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp CAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATGGTCTGTTTTACTGCTaGGGGAGTTGCTATTGTTAT +
Preference number: 4 (lower is better)
Translates to: QRKSQPRFTDLYVAFGQYGLFYC*GSCYCY
Trigger: ATAACAATAGCAACTCCCCCAGCAGTAAAACAGACC...ATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTGGTCTGTTTTACTGCTaGGGGAGTTGCTATTGTTAT +
Preference number: 4 (lower is better)
Translates to: VPAKIHRSVCSLRSISQCGLFYC*GSCYCY
Trigger: ATAACAATAGCAACTCCCCCAGCAGTAAAACAGACC...ACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCCCATCTCACCATCTGGAACATCTTTaGCCAGTAGTTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SMTSFIKSNSSPNLSPSHHLEHL*PVVLQP
Trigger: TGGCTGCAGAACTACTGGCCAAAGATGTTCCAGATG...GTGAGATGGGCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp ATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTAAATTTCATTGCACAGAACTaGTCCTGTAGCAGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: IPEFSPYGDSSGIATILNFIAQN*SCSRED
Trigger: GTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAA...ATTTAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR TCA 90 bp AGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGATATCTTCTGGAACACTaGAGAATCCTTCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SLRSISQCTSGVSSSLHRYLLEH*RILLCK
Trigger: CTTGCAGAGAAGGATTCTTCAGTGTTCCAGAAGATA...TCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TGCTTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATACAGGCCTGTGCAGCTTaGAACTGTATCTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: CLKHLPTSLFSFSMTSFIQACAA*NCIFWN
Trigger: GTTCCAGAAGATACAGTTTCAAGCTGCACAGGCCTG...TATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp CCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGGGTTGCCACAGTTaGTCTCTTGGCAATGTAATT +
Preference number: 4 (lower is better)
Translates to: PRFTDLYVAFGQYHSVHQEGCHS*SLGNVI
Trigger: AATTACATTGCCAAGAGATCAACTGTGGCAACCCTC...CTGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGAGGGTTGCCACAGTTaGTCTCTTGGCAATGTAATT +
Preference number: 4 (lower is better)
Translates to: FGQYHSVHQESQVHCTELEGCHS*SLGNVI
Trigger: AATTACATTGCCAAGAGATCAACTGTGGCAACCCTC...CAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTGGGCAAATTCCTTCTaGTACCATCTCTGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: SLFSFSMTSFIKSNSSPNWANSF*YHLWPQ
Trigger: TTGGGGCCAGAGATGGTATCAGAAGGAATTTGCCCA...GTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp GCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAAGCACTAACACCTaGTATGAACTGATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: AKIHRSVCSLRSISQCTSGSTNT*YELIGP
Trigger: TGGACCAATCAGTTCATATCAGGTGTTAGTGCTTCC...TGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp CTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATTCCTGGAAGTTAAACGATGTTaGATGAGAAAAGTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LKFIAQNWSCSREDSEFLEVKRC*MRKVSQ
Trigger: CTGGCTAACTTTTCTCATGCAACATCGTTTAACTTC...CAGGAATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp GGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCGTTGCTATTGTTATTTaGACTGAGTGCCGCTTAGGA +
Preference number: 4 (lower is better)
Translates to: GQYHSVHQESQVHCTELVVAIVI*TECRLG
Trigger: TCCTAAGCGGCACTCAGTGCAAATAACAATAGCAAC...GACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp AGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTAGTTGCTATTGTTATTTaGACTGAGTGCCGCTTAGGA +
Preference number: 4 (lower is better)
Translates to: RIPEFSPYGDSSGIATILVAIVI*TECRLG
Trigger: TCCTAAGCGGCACTCAGTGCAAATAACAATAGCAAC...TAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp ACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAAGTACTGTTTCTAAAGTaGTTGAAACATTTGCCTACG +
Preference number: 4 (lower is better)
Translates to: TQRKSQPRFTDLYVAFGQVLFLK*LKHLPT
Trigger: CGTAGGCAAATGTTTCAAGCACTTTAGAAACAGTAC...TTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR GCA 90 bp TTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGCACCTGAGCCCAAACTaGACAGGAGTGTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LKHLPTSLFSFSMTSFIKHLSPN*TGVSSH
Trigger: GTGAGAAGACACTCCTGTGCAGTTTGGGCTCAGGTG...CTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374270.8
CDS-3UTR CCA 90 bp GTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTAGAGTGGCTCCAAACTaGCACTCATTTTTATCAACA +
Preference number: 4 (lower is better)
Translates to: VPAKIHRSVCSLRSISQCRVAPN*HSFLST
Trigger: TGTTGATAAAAATGAGTGCCAGTTTGGAGCCACTCT...ACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTCCCACAGACAAGAGTaGCTCCAAACTGGCACTCAT +
Preference number: 4 (lower is better)
Translates to: SLFSFSMTSFIKSNSSPNSHRQE*LQTGTH
Trigger: ATGAGTGCCAGTTTGGAGCCACTCTTGTCTGTGGGA...GTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp TCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCCCATCTCACTCTTGTTGTTGTTTGTaGCTCGATATCCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SMTSFIKSNSSPNLSPSHSCCCL*LDILPG
Trigger: GCCTGGAAGGATATCGAGCCACAAACAACAACAAGA...GTGAGATGGGCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp AGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGACCACAGTTGATCTCTTaGCAATGTAATTTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SLRSISQCTSGVSSSLHRPQLIS*QCNFGD
Trigger: GTCCCCAAAATTACATTGCCAAGAGATCAACTGTGG...TCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCTCAACTTCAGCTGTCTaGAAACCGATGACGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FSFSMTSFIKSNSSPNLSSTSAV*KPMTAG
Trigger: GCCAGCCGTCATCGGTTTCCAGACAGCTGAAGTTGA...GCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp AATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTCTCTGGCCCCAAATGTaGAATAAATACATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NITVYIRSLKFIAQNWSCLWPQM*NKYISS
Trigger: GGAGGAGATGTATTTATTCCACATTTGGGGCCAGAG...ACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACCAAGAAAATGTGCTTTaGAGGGCCAGGGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: SLFSFSMTSFIKSNSSPNQENVL*RARGST
Trigger: AGTGCTTCCCCTGGCCCTCCAAAGCACATTTTCTTG...GTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp GAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCAACGTATAATTTCCTATaGTATAGCCATCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: EEVPAKIHRSVCSLRSISTYNFL*YSHLEP
Trigger: AGGTTCCAGATGGCTATATCATAGGAAATTATACGT...TGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCCCATCTCACTATCTTCTGGAACACTaGAGAATCCTTCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SMTSFIKSNSSPNLSPSHYLLEH*RILLCK
Trigger: CTTGCAGAGAAGGATTCTTCAGTGTTCCAGAAGATA...GTGAGATGGGCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp AGCAGGAAACTTATTGGCATGGCCAGGCTAGTATATTTTCTCATTAGTATATCACAGGCCTGTGCAGCTTaGAACTGTATCTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SRKLIGMARLVYFLISISQACAA*NCIFWN
Trigger: GTTCCAGAAGATACAGTTTCAAGCTGCACAGGCCTG...TGATATACTAATGAGAAAATATACTAGCCTGGCCATGCCAATAAGTTTCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp CCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACAATCCTGAAATGTTACTaGTGGTCTGTTTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: PAKIHRSVCSLRSISQCTILKCY*WSVLLL
Trigger: CAGCAGTAAAACAGACCATCAGTAACATTTCAGGAT...TGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp CGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTATCCTGAAATGTTACTaGTGGTCTGTTTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: RSISQCTSGVSSSLHRTGILKCY*WSVLLL
Trigger: CAGCAGTAAAACAGACCATCAGTAACATTTCAGGAT...ACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCGTTTTCTCCTTATGGTaGCTCCTCAGGGATAGCCAC +
Preference number: 4 (lower is better)
Translates to: FSFSMTSFIKSNSSPNLSVFSLW*LLRDSH
Trigger: GTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAAC...GCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR GCA 90 bp AATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTTTGCAGAGATTCTCTTaGAGTCAATGTCTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: NITVYIRSLKFIAQNWSCLQRFS*SQCLEE
Trigger: CTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAA...ACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CCA 90 bp CCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGTTCAGGTCCATTCCTTaGCAAGTATCCATCCATACA +
Preference number: 4 (lower is better)
Translates to: PRFTDLYVAFGQYHSVHQFRSIP*QVSIHT
Trigger: TGTATGGATGGATACTTGCCAAGGAATGGACCTGAA...CTGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATACCGTTGTCCTTTTATaGATATCACATATGAGATCT +
Preference number: 4 (lower is better)
Translates to: GVSSSLHRTGPVAGKTQNTVVLL*ISHMRS
Trigger: AGATCTCATATGTGATATCCATAAAAGGACAACGGT...ATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp ACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAAACCGTTGTCCTTTTATaGATATCACATATGAGATCT +
Preference number: 4 (lower is better)
Translates to: TQRKSQPRFTDLYVAFGQTVVLL*ISHMRS
Trigger: AGATCTCATATGTGATATCCATAAAAGGACAACGGT...TTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp GTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCCCAGAACGGTAAATTaGTACATGTGTTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: VCSLRSISQCTSGVSSSLPRTVN*YMCSDP
Trigger: TGGATCAGAACACATGTACCAATTTACCGTTCTGGG...CAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp ACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCACTCTGGCCCCAAATGTaGAATAAATACATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TSLFSFSMTSFIKSNSSPLWPQM*NKYISS
Trigger: GGAGGAGATGTATTTATTCCACATTTGGGGCCAGAG...TGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp CCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCTGCCATCGTTGGGAATaGATGTCTTGTTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: PTSLFSFSMTSFIKSNSSCHRWE*MSCCCL
Trigger: CAAACAACAACAAGACATTCATTCCCAACGATGGCA...GCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp TTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCCCATATCAGCTGTCTTaGTGCTTCTCCATCTCAAGC +
Preference number: 4 (lower is better)
Translates to: FSFSMTSFIKSNSSPNLSPYQLS*CFSISS
Trigger: GCTTGAGATGGAGAAGCATCAAGACAGCTGATATGG...GCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp AGCAGGAAACTTATTGGCATGGCCAGGCTAGTATATTTTCTCATTAGTATATCACCATCTGCAGCAGCATaGGTGACGAATCTTATTCCA +
Preference number: 4 (lower is better)
Translates to: SRKLIGMARLVYFLISISPSAAA*VTNLIP
Trigger: TGGAATAAGATTCGTCACTCATGCTGCTGCAGATGG...TGATATACTAATGAGAAAATATACTAGCCTGGCCATGCCAATAAGTTTCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355396.7
ENST00000374263.7
CDS-3UTR GCA 90 bp GGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTTCTTGAGTTTATTTaGCATCTCACACAGGTATCA +
Preference number: 4 (lower is better)
Translates to: GQYHSVHQESQVHCTELVLLEFI*HLTQVS
Trigger: TGATACCTGTGTGAGATGGCAAATAAACTCAAGAAG...GACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp CGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCTTCTTGAGTTTATTTaGCATCTCACACAGGTATCA +
Preference number: 4 (lower is better)
Translates to: RSISQCTSGVSSSLHRTGLLEFI*HLTQVS
Trigger: TGATACCTGTGTGAGATGGCAAATAAACTCAAGAAG...ACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp TTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCTTCCCTTCTCTTTGCTaGCATGTGGCATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: FSFSMTSFIKSNSSPNLSFPSLC*HVACSW
Trigger: CCATGAACATGCCACATGCCAGCAAAGAGAAGGGAA...GCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp AGCAGGAAACTTATTGGCATGGCCAGGCTAGTATATTTTCTCATTAGTATATCACATCTGGAACATCTTTaGCCAGTAGTTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SRKLIGMARLVYFLISISHLEHL*PVVLQP
Trigger: TGGCTGCAGAACTACTGGCCAAAGATGTTCCAGATG...TGATATACTAATGAGAAAATATACTAGCCTGGCCATGCCAATAAGTTTCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp AATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTACGTATAATTTCCTATaGTATAGCCATCTGGAACCT +
Preference number: 4 (lower is better)
Translates to: NITVYIRSLKFIAQNWSCTYNFL*YSHLEP
Trigger: AGGTTCCAGATGGCTATATCATAGGAAATTATACGT...ACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp GGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTACAAATCCATAGTTaGAAATACAGATCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GQYHSVHQESQVHCTELVLQIHS*KYRSSS
Trigger: GGAAGAAGATCTGTATTTGCAACTATGGATTTGTAG...GACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR GCA 90 bp TTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGAATCACAAGAAAATGTaGTTTGGAGGGCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LKHLPTSLFSFSMTSFIKNHKKM*FGGPGE
Trigger: TTCCCCTGGCCCTCCAAAGCACATTTTCTTGTGATT...CTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR GCA 90 bp AATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTGTACTGTTTCTAAAGTaGTTGAAACATTTGCCTACG +
Preference number: 4 (lower is better)
Translates to: NITVYIRSLKFIAQNWSCVLFLK*LKHLPT
Trigger: CGTAGGCAAATGTTTCAAGCACTTTAGAAACAGTAC...ACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp CCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACAACCGTTGTCCTTTTATaGATATCACATATGAGATCT +
Preference number: 4 (lower is better)
Translates to: PAKIHRSVCSLRSISQCTTVVLL*ISHMRS
Trigger: AGATCTCATATGTGATATCCATAAAAGGACAACGGT...TGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CCA 90 bp AGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTAACCGTTGTCCTTTTATaGATATCACATATGAGATCT +
Preference number: 4 (lower is better)
Translates to: RIPEFSPYGDSSGIATILTVVLL*ISHMRS
Trigger: AGATCTCATATGTGATATCCATAAAAGGACAACGGT...TAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR TCA 90 bp TTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTATCTTCTGGAACACTaGAGAATCCTTCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LKHLPTSLFSFSMTSFIKYLLEH*RILLCK
Trigger: CTTGCAGAGAAGGATTCTTCAGTGTTCCAGAAGATA...CTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp TTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTATTGTTATTTGCACTaGGTGCCGCTTAGGAGATCT +
Preference number: 4 (lower is better)
Translates to: LKHLPTSLFSFSMTSFIKYCYLH*VPLRRS
Trigger: AGATCTCCTAAGCGGCACTCAGTGCAAATAACAATA...CTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR TCA 90 bp TCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACATCCTGAAATGTTACTaGTGGTCTGTTTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: SLFSFSMTSFIKSNSSPNILKCY*WSVLLL
Trigger: CAGCAGTAAAACAGACCATCAGTAACATTTCAGGAT...GTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR GCA 90 bp TCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCCCATCTCACCTACAAATCCATAGTTaGAAATACAGATCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SMTSFIKSNSSPNLSPSHLQIHS*KYRSSS
Trigger: GGAAGAAGATCTGTATTTGCAACTATGGATTTGTAG...GTGAGATGGGCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CCA 90 bp CACAGCAGGAAACTTATTGGCATGGCCAGGCTAGTATATTTTCTCATTAGTATAAGAGTGGCTCCAAACTaGCACTCATTTTTATCAACA +
Preference number: 4 (lower is better)
Translates to: HSRKLIGMARLVYFLISIRVAPN*HSFLST
Trigger: TGTTGATAAAAATGAGTGCCAGTTTGGAGCCACTCT...TATACTAATGAGAAAATATACTAGCCTGGCCATGCCAATAAGTTTCCTGCTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR GCA 90 bp TGCTTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAGAAGTTAAACGATGTTaGATGAGAAAAGTTAGCCAG +
Preference number: 4 (lower is better)
Translates to: CLKHLPTSLFSFSMTSFIEVKRC*MRKVSQ
Trigger: CTGGCTAACTTTTCTCATGCAACATCGTTTAACTTC...TATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
3UTR CAA 72 bp CTGAATGAATTAACAGAAATGCTTTTATATAGGAGGTaGCAGAGATTCTCTTGCAGTCAATGTCTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LNELTEMLLYRR*QRFSCSQCLEE
Trigger: CTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAACCTCCTATATAAAAGCATTTCTGTTAATTCATTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp GTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGGGCTGGGAATGGAGAAAGTaGCAGGCCCACATGCTCCCT +
Preference number: 5 (lower is better)
Translates to: VAGPHAPWTEVTRSLCAGWEWRK*QAHMLP
Trigger: AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCA...GCCCGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS GCA 90 bp TCGAGCGCCTGGGAGGTGCTGTGGAGATGTTCACGGTGTAGTTGGTaGCTGGGTACAGGGCTAGGCACACTTCTGGGGTCCTGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: SSAWEVLWRCSRCSW*LGTGLGTLLGSCCL
Trigger: CAGACAGCAGGACCCCAGAAGTGTGCCTAGCCCTGTACCCAGGCACCAACTACACCGTGAACATCTCCACAGCACCTCCCAGGCGCTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000415074.1
ENST00000528773.1
CDS GCA 90 bp AGCTGTCTGGAAACCGATGACGGCTGGCATCGAGCGCCTGGGAGGTaGTGTGGAGATGTTCACGGTGTAGTTGGTGCCTGGGTACAGGGC +
Preference number: 5 (lower is better)
Translates to: SCLETDDGWHRAPGR*CGDVHGVVGAWVQG
Trigger: GCCCTGTACCCAGGCACCAACTACACCGTGAACATCTCCACAGCACCTCCCAGGCGCTCGATGCCAGCCGTCATCGGTTTCCAGACAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000415074.1
ENST00000528773.1
CDS CCA 90 bp GCATCGAGCGCCTGGGAGGTGCTGTGGAGATGTTCACGGTGTAGTTaGTGCCTGGGTACAGGGCTAGGCACACTTCTGGGGTCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: ASSAWEVLWRCSRCS*CLGTGLGTLLGSCC
Trigger: ACAGCAGGACCCCAGAAGTGTGCCTAGCCCTGTACCCAGGCACCAACTACACCGTGAACATCTCCACAGCACCTCCCAGGCGCTCGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000415074.1
ENST00000528773.1
CDS CCA 90 bp CCCGTGGGAGTTTCTGCTACCAGCTGTCTGGAAACCGATGACGGCTaGCATCGAGCGCCTGGGAGGTGCTGTGGAGATGTTCACGGTGTA +
Preference number: 5 (lower is better)
Translates to: PVGVSATSCLETDDG*HRAPGRCCGDVHGV
Trigger: TACACCGTGAACATCTCCACAGCACCTCCCAGGCGCTCGATGCCAGCCGTCATCGGTTTCCAGACAGCTGGTAGCAGAAACTCCCACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415074.1
CDS-3UTR CAA 90 bp GTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGGGCCTGGGGGAGTTGCTATaGTTATTTGCACTGAGTGCC +
Preference number: 5 (lower is better)
Translates to: VAGPHAPWTEVTRSLCAGLGELL*LFALSA
Trigger: GGCACTCAGTGCAAATAACAATAGCAACTCCCCCAG...GCCCGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGGGCGTTCAGGTCCATTCCTaGGCAAGTATCCATCCATAC +
Preference number: 5 (lower is better)
Translates to: VAGPHAPWTEVTRSLCAGVQVHS*ASIHPY
Trigger: GTATGGATGGATACTTGCCAAGGAATGGACCTGAAC...GCCCGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGCTCTCAAAGCCCTCTaGACAGACATAGCGAGCCAC +
Preference number: 5 (lower is better)
Translates to: EWGPAGNGESCRPTCSLDALKAL*TDIASH
Trigger: GTGGCTCGCTATGTCTGTCAAGAGGGCTTTGAGAGC...GTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGGGCACACACTACAGGCACTaGTTCCCTCGTTGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: VAGPHAPWTEVTRSLCAGTHYRH*FPRCEV
Trigger: AACTTCACAACGAGGGAACAAGTGCCTGTAGTGTGT...GCCCGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAATCAGCATCAGAGGCGTaGCTAAAGAAGGAGGAAGCG +
Preference number: 5 (lower is better)
Translates to: GAQLGMEKVAGPHAPWTESASEA*LKKEEA
Trigger: CGCTTCCTCCTTCTTTAGCAACGCCTCTGATGCTGA...TTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp TGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGATCAGCATCAGAGGCGTaGCTAAAGAAGGAGGAAGCG +
Preference number: 5 (lower is better)
Translates to: WGPAGNGESCRPTCSLDGSASEA*LKKEEA
Trigger: CGCTTCCTCCTTCTTTAGCAACGCCTCTGATGCTGA...TCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACCGCATTTCTGGAGGGTaGCCACAGTTGATCTCTTGG +
Preference number: 5 (lower is better)
Translates to: EWGPAGNGESCRPTCSLDRISGG*PQLISW
Trigger: CCAAGAGATCAACTGTGGCAACCCTCCAGAAATGCG...GTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGCGCATTTCTGGAGGGTaGCCACAGTTGATCTCTTGG +
Preference number: 5 (lower is better)
Translates to: GESCRPTCSLDGSHTEPLRISGG*PQLISW
Trigger: CCAAGAGATCAACTGTGGCAACCCTCCAGAAATGCG...CAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACGCTCTCAAAGCCCTCTaGACAGACATAGCGAGCCAC +
Preference number: 5 (lower is better)
Translates to: PAGNGESCRPTCSLDGSHALKAL*TDIASH
Trigger: GTGGCTCGCTATGTCTGTCAAGAGGGCTTTGAGAGC...GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS GCA 90 bp AGAATGATCACAACAGCCAGGGAACCCAGTCCAACACCCGCCATCTaGAGCAGCATGAGTGACGAATCTGTGTGTCCCCTGAGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: RMITTAREPSPTPAI*SSMSDESVCPLSWP
Trigger: GGGCCAACTCAGGGGACACACAGATTCGTCACTCATGCTGCTGCAGATGGCGGGTGTTGGACTGGGTTCCCTGGCTGTTGTGATCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374264.6
CDS CCA 90 bp TCTCAAAGCCCTCTTGACAGACATAGCGAGCCACACCGCCCAGCCTaGAGCTGTGATTTCCTACCAAGATGGCGTGCCGCATTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: SQSPLDRHSEPHRPA*SCDFLPRWRAAFLE
Trigger: CTCCAGAAATGCGGCACGCCATCTTGGTAGGAAATCACAGCTCCAGGCTGGGCGGTGTGGCTCGCTATGTCTGTCAAGAGGGCTTTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000415074.1
ENST00000482851.1
ENST00000532348.1
CDS-3UTR CAA 90 bp GAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACCTTCTTCCCTTCTCTTaGCTGGCATGTGGCATGTTC +
Preference number: 5 (lower is better)
Translates to: EWGPAGNGESCRPTCSLDLLPFS*LACGMF
Trigger: GAACATGCCACATGCCAGCAAAGAGAAGGGAAGAAG...GTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CCAGGAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTCTGTCTGTGGTCAAGTaGACTGTCTCCTCACGAACT +
Preference number: 5 (lower is better)
Translates to: PGMGPSWEWRKLQAHMLPLSVVK*TVSSRT
Trigger: AGTTCGTGAGGAGACAGTCAACTTGACCACAGACAG...AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCACACACTACAGGCACTaGTTCCCTCGTTGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: LPSSSASSPLSVHLPSHRTHYRH*FPRCEV
Trigger: AACTTCACAACGAGGGAACAAGTGCCTGTAGTGTGT...GCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CAA 90 bp ACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCCTGGGGGAGTTGCTATaGTTATTTGCACTGAGTGCC +
Preference number: 5 (lower is better)
Translates to: TCPAAVHPPHSVSICHHTLGELL*LFALSA
Trigger: GGCACTCAGTGCAAATAACAATAGCAACTCCCCCAG...GGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CAA 90 bp GAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCCTGGGGGAGTTGCTATaGTTATTTGCACTGAGTGCC +
Preference number: 5 (lower is better)
Translates to: ESCRPTCSLDGSHTEPLCLGELL*LFALSA
Trigger: GGCACTCAGTGCAAATAACAATAGCAACTCCCCCAG...GCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCGCTGAGAACAAGAAAATGTGCTTaGGAGGGCCAGGGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: QQQCILPTQCPSAITPLRTRKCA*EGQGKH
Trigger: GTGCTTCCCCTGGCCCTCCAAAGCACATTTTCTTGT...TCTCAGCGGTGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CAA 90 bp CCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACCAGGCCTGTGCAGCTaGAAACTGTATCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: PSWEWRKLQAHMLPGRKSPGLCS*KLYLLE
Trigger: TTCCAGAAGATACAGTTTCAAGCTGCACAGGCCTGG...TGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp ACACCTGCCCAGCAGCAGTGCATCCTCCCCACTCAGTGTCCATCTGCCATCACACCAGGCCTGTGCAGCTaGAAACTGTATCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: TPAQQQCILPTQCPSAITPGLCS*KLYLLE
Trigger: TTCCAGAAGATACAGTTTCAAGCTGCACAGGCCTGG...TGTGATGGCAGATGGACACTGAGTGGGGAGGATGCACTGCTGCTGGGCAGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CAA 90 bp AAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGACACACTACAGGCACTaGTTCCCTCGTTGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: KVAGPHAPWTEVTRSLCATHYRH*FPRCEV
Trigger: AACTTCACAACGAGGGAACAAGTGCCTGTAGTGTGT...CGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAATCCATATCAGCTGTCTaGATGCTTCTCCATCTCAAG +
Preference number: 5 (lower is better)
Translates to: GAQLGMEKVAGPHAPWTESISAV*MLLHLK
Trigger: CTTGAGATGGAGAAGCATCAAGACAGCTGATATGGA...TTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp TTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCGCTCTCAAAGCCCTCTaGACAGACATAGCGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LQSMSRGADPQASLRGSPALKAL*TDIASH
Trigger: GTGGCTCGCTATGTCTGTCAAGAGGGCTTTGAGAGC...GGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCCATAGGGTCCAACCGTaGTCCTTTTATGGATATCAC +
Preference number: 5 (lower is better)
Translates to: ESCRPTCSLDGSHTEPLCHRVQP*SFYGYH
Trigger: GTGATATCCATAAAAGGACAACGGTTGGACCCTATG...GCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CCAGGAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTTTACTGCTGGGGGAGTaGCTATTGTTATTTGCACTG +
Preference number: 5 (lower is better)
Translates to: PGMGPSWEWRKLQAHMLPLLLGE*LLLFAL
Trigger: CAGTGCAAATAACAATAGCAACTCCCCCAGCAGTAA...AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp AATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTGGTCCATTTTTCTCCTaGGCTTTCCTCAGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: NGESCRPTCSLDGSHTEPGPFFS*AFLSLR
Trigger: CCTCAGACTGAGGAAAGCCAAGGAGAAAAATGGACC...AGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGTTGCAGAGATTCTCTaGCAGTCAATGTCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: ESCRPTCSLDGSHTEPLCVAEIL*QSMSRG
Trigger: TCCTCTAGACATTGACTGCAAGAGAATCTCTGCAAC...GCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CAA 90 bp AAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCGGTTGCAGAGATTCTCTaGCAGTCAATGTCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: KVAGPHAPWTEVTRSLCAVAEIL*QSMSRG
Trigger: TCCTCTAGACATTGACTGCAAGAGAATCTCTGCAAC...CGCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CAA 90 bp GCCAGGGAACCCAGTCCAACACCCGCCATCTGCAGCAGCATGAGTGACGAATGGTGGTGGGGTAGCTCTTaGTATAATTCCATAAGCTCC +
Preference number: 5 (lower is better)
Translates to: AREPSPTPAICSSMSDEWWWGSS*YNSISS
Trigger: GGAGCTTATGGAATTATACAAAGAGCTACCCCACCA...CCATTCGTCACTCATGCTGCTGCAGATGGCGGGTGTTGGACTGGGTTCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475283.2
CDS-3UTR CAA 90 bp GAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGTTGCAGAGATTCTCTaGCAGTCAATGTCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: EKVAGPHAPWTEVTRSLCVAEIL*QSMSRG
Trigger: TCCTCTAGACATTGACTGCAAGAGAATCTCTGCAAC...ACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CAA 90 bp GAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCAAGTGCTTGAAACATTaGCCTACGTCACTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: ESCRPTCSLDGSHTEPLCKCLKH*PTSLFS
Trigger: AGAGAACAGTGACGTAGGCAAATGTTTCAAGCACTT...GCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS GCA 90 bp AGCATTCAAAGCTCCCATGAGTGTTCACGCATCGCCCTCCATGCCTaGACAGGCCAGAAACTTCACACTCATCTATGTCTGCAACCAGCT +
Preference number: 5 (lower is better)
Translates to: SIQSSHECSRIALHA*TGQKLHTHLCLQPA
Trigger: AGCTGGTTGCAGACATAGATGAGTGTGAAGTTTCTGGCCTGTGCAGGCATGGAGGGCGATGCGTGAACACTCATGGGAGCTTTGAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482851.1
CDS-3UTR CAA 90 bp TGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCACTGGGGGAGTTGCTATaGTTATTTGCACTGAGTGCC +
Preference number: 5 (lower is better)
Translates to: CSQCLEELTLRHHSEEVPLGELL*LFALSA
Trigger: GGCACTCAGTGCAAATAACAATAGCAACTCCCCCAG...TGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CCAGGAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTCTTTTATATAGGAGGTaGCAGAGATTCTCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: PGMGPSWEWRKLQAHMLPLLYRR*QRFSCS
Trigger: ACTGCAAGAGAATCTCTGCAACCTCCTATATAAAAG...AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CAA 90 bp GAATGGGGCCCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACCTGTTTCTAAAGTGCTaGAAACATTTGCCTACGTCA +
Preference number: 5 (lower is better)
Translates to: EWGPAGNGESCRPTCSLDLFLKC*KHLPTS
Trigger: TGACGTAGGCAAATGTTTCAAGCACTTTAGAAACAG...GTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGGGCCCCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp GGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGATGAATGTCTTGTTGTaGTTTGTGGCTCGATATCCT +
Preference number: 5 (lower is better)
Translates to: GNGESCRPTCSLDGSHTEMNVLL*FVARYP
Trigger: AGGATATCGAGCCACAAACAACAACAAGACATTCAT...CTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTATGAATGTCTTGTTGTaGTTTGTGGCTCGATATCCT +
Preference number: 5 (lower is better)
Translates to: EKVAGPHAPWTEVTRSLCMNVLL*FVARYP
Trigger: AGGATATCGAGCCACAAACAACAACAAGACATTCAT...ACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp TGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTGGAGGGTTGCCACAGTaGATCTCTTGGCAATGTAAT +
Preference number: 5 (lower is better)
Translates to: CLEELTLRHHSEEVPAKIGGLPQ*ISWQCN
Trigger: ATTACATTGCCAAGAGATCAACTGTGGCAACCCTCC...AATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp TTGCAGAGATTCTCTTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACCGCATTTCTGGAGGGTaGCCACAGTTGATCTCTTGG +
Preference number: 5 (lower is better)
Translates to: LQRFSCSQCLEELTLRHHRISGG*PQLISW
Trigger: CCAAGAGATCAACTGTGGCAACCCTCCAGAAATGCG...GTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACACGGAGCCTCTGTGCTGGGGTTTATTCTTCTaGAGTTTATTTGCCATCTCA +
Preference number: 5 (lower is better)
Translates to: ESCRPTCSLDGSHTEPLCWGLFF*SLFAIS
Trigger: TGAGATGGCAAATAAACTCAAGAAGAATAAACCCCA...GCACAGAGGCTCCGTGTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTCCATATCAGCTGTCTaGATGCTTCTCCATCTCAAG +
Preference number: 5 (lower is better)
Translates to: GADPQASLRGSPSQDSQISISAV*MLLHLK
Trigger: CTTGAGATGGAGAAGCATCAAGACAGCTGATATGGA...GATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CCAGCTGGGAATGGAGAAAGTTGCAGGCCCACATGCTCCCTGGACGGAAGTCACCTGTTTCTAAAGTGCTaGAAACATTTGCCTACGTCA +
Preference number: 5 (lower is better)
Translates to: PAGNGESCRPTCSLDGSHLFLKC*KHLPTS
Trigger: TGACGTAGGCAAATGTTTCAAGCACTTTAGAAACAG...GTGACTTCCGTCCAGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS GCA 90 bp AGCATTCAAAGCTCCCATGAGTGTTCACGCATCGCCCTCCATGCCTaGACAGGCCAGAAACTTCACACTCATCTATGTCTGTACAAAAGG +
Preference number: 5 (lower is better)
Translates to: SIQSSHECSRIALHA*TGQKLHTHLCLYKR
Trigger: CCTTTTGTACAGACATAGATGAGTGTGAAGTTTCTGGCCTGTGCAGGCATGGAGGGCGATGCGTGAACACTCATGGGAGCTTTGAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS CCA 90 bp GTACCACAGTCTATTTCTGTGCATGATGTGGCATCGGTGGTCGGGTaGAAAGGTTCAGGTCCATTCCTTGGCAAGTATCCATCCATACAG +
Preference number: 5 (lower is better)
Translates to: VPQSISVHDVASVVG*KGSGPFLGKYPSIQ
Trigger: CTGTATGGATGGATACTTGCCAAGGAATGGACCTGAACCTTTCCACCCGACCACCGATGCCACATCATGCACAGAAATAGACTGTGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000482851.1
CDS-3UTR CAA 90 bp TTGCAGAGATTCTCTTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACCTTCTTCCCTTCTCTTaGCTGGCATGTGGCATGTTC +
Preference number: 5 (lower is better)
Translates to: LQRFSCSQCLEELTLRHHLLPFS*LACGMF
Trigger: GAACATGCCACATGCCAGCAAAGAGAAGGGAAGAAG...GTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAAGAGAATCTCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGCTTGGCAATGTAATTTaGGGGACTCCCATGTGCCCA +
Preference number: 5 (lower is better)
Translates to: HHSEEVPAKIHRSVCSLRLGNVI*GTPMCP
Trigger: TGGGCACATGGGAGTCCCCAAAATTACATTGCCAAG...CCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTCATAGGGTCCAACCGTaGTCCTTTTATGGATATCAC +
Preference number: 5 (lower is better)
Translates to: ELTLRHHSEEVPAKIHRSHRVQP*SFYGYH
Trigger: GTGATATCCATAAAAGGACAACGGTTGGACCCTATG...AGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp TTGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCTTACTGCTGGGGGAGTaGCTATTGTTATTTGCACTG +
Preference number: 5 (lower is better)
Translates to: LQSMSRGADPQASLRGSPLLLGE*LLLFAL
Trigger: CAGTGCAAATAACAATAGCAACTCCCCCAGCAGTAA...GGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp TGCAGTCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCATTACTGCTGGGGGAGTaGCTATTGTTATTTGCACTG +
Preference number: 5 (lower is better)
Translates to: CSQCLEELTLRHHSEEVPLLLGE*LLLFAL
Trigger: CAGTGCAAATAACAATAGCAACTCCCCCAGCAGTAA...TGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGACTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp ACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAAACAAGAAAATGTGCTTaGGAGGGCCAGGGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: TQRKSQPRFTDLYVAFGQTRKCA*EGQGKH
Trigger: GTGCTTCCCCTGGCCCTCCAAAGCACATTTTCTTGT...TTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCATGGGAATGGAGAAAGTaGCAGGCCCACATGCTCCCT +
Preference number: 5 (lower is better)
Translates to: EEVPAKIHRSVCSLRSISWEWRK*QAHMLP
Trigger: AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCA...TGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CAA 90 bp AGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAACTTCTTCCCTTCTCTTaGCTGGCATGTGGCATGTTC +
Preference number: 5 (lower is better)
Translates to: RSLKFIAQNWSCSREDSELLPFS*LACGMF
Trigger: GAACATGCCACATGCCAGCAAAGAGAAGGGAAGAAG...TTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp TCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCATTGGGAATGAATGTCTaGTTGTTGTTTGTGGCTCGA +
Preference number: 5 (lower is better)
Translates to: SRGADPQASLRGSPSQDSLGMNV*LLFVAR
Trigger: TCGAGCCACAAACAACAACAAGACATTCATTCCCAA...TGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp TCAATGTCTAGAGGAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAATTGGGAATGAATGTCTaGTTGTTGTTTGTGGCTCGA +
Preference number: 5 (lower is better)
Translates to: SMSRGADPQASLRGSPSQLGMNV*LLFVAR
Trigger: TCGAGCCACAAACAACAACAAGACATTCATTCCCAA...TTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTCCTCTAGACATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATCTTGGCAATGTAATTTaGGGGACTCCCATGTGCCCA +
Preference number: 5 (lower is better)
Translates to: GVSSSLHRTGPVAGKTQNLGNVI*GTPMCP
Trigger: TGGGCACATGGGAGTCCCCAAAATTACATTGCCAAG...ATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp AGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAACTGTCTGTGGTCAAGTaGACTGTCTCCTCACGAACT +
Preference number: 5 (lower is better)
Translates to: RSLKFIAQNWSCSREDSELSVVK*TVSSRT
Trigger: AGTTCGTGAGGAGACAGTCAACTTGACCACAGACAG...TTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp AGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTATGGGAATGGAGAAAGTaGCAGGCCCACATGCTCCCT +
Preference number: 5 (lower is better)
Translates to: RIPEFSPYGDSSGIATILWEWRK*QAHMLP
Trigger: AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCA...TAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CAA 90 bp GCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAATGGGAATGGAGAAAGTaGCAGGCCCACATGCTCCCT +
Preference number: 5 (lower is better)
Translates to: AFGQYHSVHQESQVHCTEWEWRK*QAHMLP
Trigger: AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCA...TTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS TCA 90 bp TGGGGTCCTGCTGTCTGTGGTCAAGTTGACTGTCTCCTCACGAACTaGTTCCATAGGGTCCAACCGTTGTCCTTTTATGGATATCACATA +
Preference number: 5 (lower is better)
Translates to: WGPAVCGQVDCLLTN*FHRVQPLSFYGYHI
Trigger: TATGTGATATCCATAAAAGGACAACGGTTGGACCCTATGGAATCAGTTCGTGAGGAGACAGTCAACTTGACCACAGACAGCAGGACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000415074.1
CDS TCA 90 bp GATGGTCTGTTTTACTGCTGGGGGAGTTGCTATTGTTATTTGCACTaGGTGCCGCTTAGGAGATCTCAGCAGGGTCACATTCACCGTATA +
Preference number: 5 (lower is better)
Translates to: DGLFYCWGSCYCYLH*VPLRRSQQGHIHRI
Trigger: TATACGGTGAATGTGACCCTGCTGAGATCTCCTAAGCGGCACTCAGTGCAAATAACAATAGCAACTCCCCCAGCAGTAAAACAGACCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000529933.5
CDS GCA 90 bp TTACTGATGGTCTGTTTTACTGCTGGGGGAGTTGCTATTGTTATTTaGACTGAGTGCCGCTTAGGAGATCTCAGCAGGGTCACATTCACC +
Preference number: 5 (lower is better)
Translates to: LLMVCFTAGGVAIVI*TECRLGDLSRVTFT
Trigger: GGTGAATGTGACCCTGCTGAGATCTCCTAAGCGGCACTCAGTGCAAATAACAATAGCAACTCCCCCAGCAGTAAAACAGACCATCAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000529933.5
CDS-3UTR CAA 90 bp GAGCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGGAATGAATGTCTTGTaGTTGTTTGTGGCTCGATAT +
Preference number: 5 (lower is better)
Translates to: ELTLRHHSEEVPAKIHRSGMNVL*LFVARY
Trigger: ATATCGAGCCACAAACAACAACAAGACATTCATTCC...AGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CACTCAGTGTCCATCTGCCATCACACCGCTGAGAAGGAGAGGAATGTGAGAATGTTGGGAATGAATGTCTaGTTGTTGTTTGTGGCTCGA +
Preference number: 5 (lower is better)
Translates to: HSVSICHHTAEKERNVRMLGMNV*LLFVAR
Trigger: TCGAGCCACAAACAACAACAAGACATTCATTCCCAA...CATTCTCACATTCCTCTCCTTCTCAGCGGTGTGATGGCAGATGGACACTGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
CDS-3UTR CAA 90 bp ACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAAGGAGGGTTGCCACAGTaGATCTCTTGGCAATGTAAT +
Preference number: 5 (lower is better)
Translates to: TQRKSQPRFTDLYVAFGQGGLPQ*ISWQCN
Trigger: ATTACATTGCCAAGAGATCAACTGTGGCAACCCTCC...TTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACACGCATTTCTGGAGGGTaGCCACAGTTGATCTCTTGG +
Preference number: 5 (lower is better)
Translates to: PAKIHRSVCSLRSISQCTRISGG*PQLISW
Trigger: CCAAGAGATCAACTGTGGCAACCCTCCAGAAATGCG...TGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATGCTCTCAAAGCCCTCTaGACAGACATAGCGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LYVAFGQYHSVHQESQVHALKAL*TDIASH
Trigger: GTGGCTCGCTATGTCTGTCAAGAGGGCTTTGAGAGC...ATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp AGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTAACAAGAAAATGTGCTTaGGAGGGCCAGGGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: RIPEFSPYGDSSGIATILTRKCA*EGQGKH
Trigger: GTGCTTCCCCTGGCCCTCCAAAGCACATTTTCTTGT...TAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGCATCAGAGGCGTaGCTAAAGAAGGAGGAAGCG +
Preference number: 5 (lower is better)
Translates to: PAKIHRSVCSLRSISQCTSASEA*LKKEEA
Trigger: CGCTTCCTCCTTCTTTAGCAACGCCTCTGATGCTGA...TGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp TCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGGTTGCAGAGATTCTCTaGCAGTCAATGTCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: SGVSSSLHRTGPVAGKTQVAEIL*QSMSRG
Trigger: TCCTCTAGACATTGACTGCAAGAGAATCTCTGCAAC...CTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS GCA 90 bp ACACACTACAGGCACTTGTTCCCTCGTTGTGAAGTTAAACGATGTTaGATGAGAAAAGTTAGCCAGATACCACCTCTGACCCAGAACGGT +
Preference number: 5 (lower is better)
Translates to: THYRHLFPRCEVKRC*MRKVSQIPPLTQNG
Trigger: ACCGTTCTGGGTCAGAGGTGGTATCTGGCTAACTTTTCTCATGCAACATCGTTTAACTTCACAACGAGGGAACAAGTGCCTGTAGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000529933.5
CDS-3UTR CAA 90 bp TGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACCCAGGCCTGTGCAGCTaGAAACTGTATCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: CSLRSISQCTSGVSSSLHPGLCS*KLYLLE
Trigger: TTCCAGAAGATACAGTTTCAAGCTGCACAGGCCTGG...GTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCAGGCCTGTGCAGCTaGAAACTGTATCTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: RSISQCTSGVSSSLHRTGPGLCS*KLYLLE
Trigger: TTCCAGAAGATACAGTTTCAAGCTGCACAGGCCTGG...ACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGGGAGGGTTGCCACAGTaGATCTCTTGGCAATGTAAT +
Preference number: 5 (lower is better)
Translates to: EVPAKIHRSVCSLRSISQGGLPQ*ISWQCN
Trigger: ATTACATTGCCAAGAGATCAACTGTGGCAACCCTCC...CTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GCTGACCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTTGGGGTTTATTCTTCTaGAGTTTATTTGCCATCTCA +
Preference number: 5 (lower is better)
Translates to: ADPQASLRGSPSQDSQICWGLFF*SLFAIS
Trigger: TGAGATGGCAAATAAACTCAAGAAGAATAAACCCCA...ACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGGTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp ATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTTCCATATCAGCTGTCTaGATGCTTCTCCATCTCAAG +
Preference number: 5 (lower is better)
Translates to: ITQRKSQPRFTDLYVAFGSISAV*MLLHLK
Trigger: CTTGAGATGGAGAAGCATCAAGACAGCTGATATGGA...ACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACAGGTCCATTTTTCTCCTaGGCTTTCCTCAGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: PAKIHRSVCSLRSISQCTGPFFS*AFLSLR
Trigger: CCTCAGACTGAGGAAAGCCAAGGAGAAAAATGGACC...TGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp TTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGACAAGAAAATGTGCTTaGGAGGGCCAGGGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: FGQYHSVHQESQVHCTELTRKCA*EGQGKH
Trigger: GTGCTTCCCCTGGCCCTCCAAAGCACATTTTCTTGT...CAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS CCA 90 bp GAACCCACTCTGACTCCAGTCAAAACAATCCAGGATTTGTGGTGCTaGAGCCCATTCTCCTACTATTCTATTTTATACTGTGCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: EPTLTPVKTIQDLWC*SPFSYYSILYCAAQ
Trigger: CTGAGCAGCACAGTATAAAATAGAATAGTAGGAGAATGGGCTCCAGCACCACAAATCCTGGATTGTTTTGACTGGAGTCAGAGTGGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528773.1
CDS-3UTR CAA 90 bp CATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGGGAATGAATGTCTTGTaGTTGTTTGTGGCTCGATAT +
Preference number: 5 (lower is better)
Translates to: HHSEEVPAKIHRSVCSLRGMNVL*LFVARY
Trigger: ATATCGAGCCACAAACAACAACAAGACATTCATTCC...CCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCGTTCAGGTCCATTCCTaGGCAAGTATCCATCCATAC +
Preference number: 5 (lower is better)
Translates to: GQYHSVHQESQVHCTELVVQVHS*ASIHPY
Trigger: GTATGGATGGATACTTGCCAAGGAATGGACCTGAAC...GACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGCTTGGCAATGTAATTTaGGGGACTCCCATGTGCCCA +
Preference number: 5 (lower is better)
Translates to: PRFTDLYVAFGQYHSVHQLGNVI*GTPMCP
Trigger: TGGGCACATGGGAGTCCCCAAAATTACATTGCCAAG...CTGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp TGCTTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATATGGGAATGGAGAAAGTaGCAGGCCCACATGCTCCCT +
Preference number: 5 (lower is better)
Translates to: CLKHLPTSLFSFSMTSFIWEWRK*QAHMLP
Trigger: AGGGAGCATGTGGGCCTGCAACTTTCTCCATTCCCA...TATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS GCA 90 bp AGAGAACCCACTCTGACTCCAGTCAAAACAATCCAGGATTTGTGGTaGTGGAGCCCATTCTCCTACTATTCTATTTTATACTGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: REPTLTPVKTIQDLW*WSPFSYYSILYCAA
Trigger: AGCAGCACAGTATAAAATAGAATAGTAGGAGAATGGGCTCCAGCACCACAAATCCTGGATTGTTTTGACTGGAGTCAGAGTGGGTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528773.1
CDS-3UTR CAA 90 bp AGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAAGGAATGAATGTCTTGTaGTTGTTTGTGGCTCGATAT +
Preference number: 5 (lower is better)
Translates to: RSLKFIAQNWSCSREDSEGMNVL*LFVARY
Trigger: ATATCGAGCCACAAACAACAACAAGACATTCATTCC...TTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATTTGGGAATGAATGTCTaGTTGTTGTTTGTGGCTCGA +
Preference number: 5 (lower is better)
Translates to: QRKSQPRFTDLYVAFGQYLGMNV*LLFVAR
Trigger: TCGAGCCACAAACAACAACAAGACATTCATTCCCAA...ATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCAAAAGGTGCCATCGTaGGGAATGAATGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RSISQCTSGVSSSLHRTGQKVPS*GMNVLL
Trigger: CAACAAGACATTCATTCCCAACGATGGCACCTTTTG...ACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGGGTTGCCACAGTaGATCTCTTGGCAATGTAAT +
Preference number: 5 (lower is better)
Translates to: AKIHRSVCSLRSISQCTSGGLPQ*ISWQCN
Trigger: ATTACATTGCCAAGAGATCAACTGTGGCAACCCTCC...TGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CCCTCAGGCATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTATGGGGTTTATTCTTCTaGAGTTTATTTGCCATCTCA +
Preference number: 5 (lower is better)
Translates to: PSGITQRKSQPRFTDLYVWGLFF*SLFAIS
Trigger: TGAGATGGCAAATAAACTCAAGAAGAATAAACCCCA...TACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGATGCCTGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCTGTCTGTGGTCAAGTaGACTGTCTCCTCACGAACT +
Preference number: 5 (lower is better)
Translates to: PTSLFSFSMTSFIKSNSSLSVVK*TVSSRT
Trigger: AGTTCGTGAGGAGACAGTCAACTTGACCACAGACAG...GCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp AGAATTCCTGAGTTTTCTCCTTATGGTGACTCCTCAGGGATAGCCACCATCTTATCCATATCAGCTGTCTaGATGCTTCTCCATCTCAAG +
Preference number: 5 (lower is better)
Translates to: RIPEFSPYGDSSGIATILSISAV*MLLHLK
Trigger: CTTGAGATGGAGAAGCATCAAGACAGCTGATATGGA...TAAGATGGTGGCTATCCCTGAGGAGTCACCATAAGGAGAAAACTCAGGAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp ACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAGGTCCATTTTTCTCCTaGGCTTTCCTCAGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: TSLFSFSMTSFIKSNSSPGPFFS*AFLSLR
Trigger: CCTCAGACTGAGGAAAGCCAAGGAGAAAAATGGACC...TGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp GGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTAGCAGGGAAGACTCAGAATCTTTTATATAGGAGGTaGCAGAGATTCTCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: GVSSSLHRTGPVAGKTQNLLYRR*QRFSCS
Trigger: ACTGCAAGAGAATCTCTGCAACCTCCTATATAAAAG...ATTCTGAGTCTTCCCTGCTACAGGACCAGTTCTGTGCAATGAACTTGAGACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS TCA 90 bp CTTCACACTCATCTATGTCTGTACAAAAGGTGCCATCGTTGGGAATaGATGTCTTGTTGTTGTTTGTGGCTCGATATCCTTCCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: LHTHLCLYKRCHRWE*MSCCCLWLDILPGK
Trigger: TTTGCCTGGAAGGATATCGAGCCACAAACAACAACAAGACATTCATTCCCAACGATGGCACCTTTTGTACAGACATAGATGAGTGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS CCA 90 bp ACAAGAGAACCCACTCTGACTCCAGTCAAAACAATCCAGGATTTGTaGTGCTGGAGCCCATTCTCCTACTATTCTATTTTATACTGTGCT +
Preference number: 5 (lower is better)
Translates to: TREPTLTPVKTIQDL*CWSPFSYYSILYCA
Trigger: AGCACAGTATAAAATAGAATAGTAGGAGAATGGGCTCCAGCACCACAAATCCTGGATTGTTTTGACTGGAGTCAGAGTGGGTTCTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528773.1
CDS-3UTR CAA 90 bp TTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGCAAAAGGTGCCATCGTaGGGAATGAATGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: FGQYHSVHQESQVHCTELQKVPS*GMNVLL
Trigger: CAACAAGACATTCATTCCCAACGATGGCACCTTTTG...CAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCGTTCAGGTCCATTCCTaGGCAAGTATCCATCCATAC +
Preference number: 5 (lower is better)
Translates to: PTSLFSFSMTSFIKSNSSVQVHS*ASIHPY
Trigger: GTATGGATGGATACTTGCCAAGGAATGGACCTGAAC...GCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp ATCACTCAGAGGAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTATCACATATGAGATCTaGGGGTTTATTCTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: ITQRKSQPRFTDLYVAFGITYEI*GFILLE
Trigger: CTCAAGAAGAATAAACCCCAAGATCTCATATGTGAT...ACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTCCTCTGAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp GTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCATAGGGTCCAACCGTaGTCCTTTTATGGATATCAC +
Preference number: 5 (lower is better)
Translates to: VCSLRSISQCTSGVSSSLHRVQP*SFYGYH
Trigger: GTGATATCCATAAAAGGACAACGGTTGGACCCTATG...CAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp TTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGCATAGGGTCCAACCGTaGTCCTTTTATGGATATCAC +
Preference number: 5 (lower is better)
Translates to: FGQYHSVHQESQVHCTELHRVQP*SFYGYH
Trigger: GTGATATCCATAAAAGGACAACGGTTGGACCCTATG...CAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp AGCAGGAAACTTATTGGCATGGCCAGGCTAGTATATTTTCTCATTAGTATATCATCAGCATCAGAGGCGTaGCTAAAGAAGGAGGAAGCG +
Preference number: 5 (lower is better)
Translates to: SRKLIGMARLVYFLISISSASEA*LKKEEA
Trigger: CGCTTCCTCCTTCTTTAGCAACGCCTCTGATGCTGA...TGATATACTAATGAGAAAATATACTAGCCTGGCCATGCCAATAAGTTTCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp AATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGGTCCTGTGTTGCAGAGATTCTCTaGCAGTCAATGTCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: NITVYIRSLKFIAQNWSCVAEIL*QSMSRG
Trigger: TCCTCTAGACATTGACTGCAAGAGAATCTCTGCAAC...ACAGGACCAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CAA 90 bp TCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACGTTCAGGTCCATTCCTaGGCAAGTATCCATCCATAC +
Preference number: 5 (lower is better)
Translates to: SLFSFSMTSFIKSNSSPNVQVHS*ASIHPY
Trigger: GTATGGATGGATACTTGCCAAGGAATGGACCTGAAC...GTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp GAAGTCCCAGCCAAGATTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGATCACATATGAGATCTaGGGGTTTATTCTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: EVPAKIHRSVCSLRSISQITYEI*GFILLE
Trigger: CTCAAGAAGAATAAACCCCAAGATCTCATATGTGAT...CTGTGATATTGACCGAAGGCTACATACAGATCTGTGAATCTTGGCTGGGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp TTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCCTGTCTGTGGTCAAGTaGACTGTCTCCTCACGAACT +
Preference number: 5 (lower is better)
Translates to: FSFSMTSFIKSNSSPNLSLSVVK*TVSSRT
Trigger: AGTTCGTGAGGAGACAGTCAACTTGACCACAGACAG...GCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp ACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCATTACTGCTGGGGGAGTaGCTATTGTTATTTGCACTG +
Preference number: 5 (lower is better)
Translates to: TSLFSFSMTSFIKSNSSPLLLGE*LLLFAL
Trigger: CAGTGCAAATAACAATAGCAACTCCCCCAGCAGTAA...TGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp AGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGACTTTTATATAGGAGGTaGCAGAGATTCTCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: SLRSISQCTSGVSSSLHRLLYRR*QRFSCS
Trigger: ACTGCAAGAGAATCTCTGCAACCTCCTATATAAAAG...TCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CAA 90 bp TTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAACTGAAGTGCTTGAAACATTaGCCTACGTCACTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: FGQYHSVHQESQVHCTELKCLKH*PTSLFS
Trigger: AGAGAACAGTGACGTAGGCAAATGTTTCAAGCACTT...CAGTTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp TGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACCTGTTTCTAAAGTGCTaGAAACATTTGCCTACGTCA +
Preference number: 5 (lower is better)
Translates to: CSLRSISQCTSGVSSSLHLFLKC*KHLPTS
Trigger: TGACGTAGGCAAATGTTTCAAGCACTTTAGAAACAG...GTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp CACAGCAGGAAACTTATTGGCATGGCCAGGCTAGTATATTTTCTCATTAGTATACAAAAGGTGCCATCGTaGGGAATGAATGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: HSRKLIGMARLVYFLISIQKVPS*GMNVLL
Trigger: CAACAAGACATTCATTCCCAACGATGGCACCTTTTG...TATACTAATGAGAAAATATACTAGCCTGGCCATGCCAATAAGTTTCCTGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp GCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCAAGTTCATTGCACAGAAATCACATATGAGATCTaGGGGTTTATTCTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: AFGQYHSVHQESQVHCTEITYEI*GFILLE
Trigger: CTCAAGAAGAATAAACCCCAAGATCTCATATGTGAT...TTCTGTGCAATGAACTTGAGACTCCTGATGTACACTGTGATATTGACCGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CTTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAACACACTACAGGCACTaGTTCCCTCGTTGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: LETFAYVTVLFFNDLLHKTHYRH*FPRCEV
Trigger: AACTTCACAACGAGGGAACAAGTGCCTGTAGTGTGT...TTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp TCAATGACCTCCTTCATAAAGTCAAACTCTAGCCCAAACTTAAGCCCATCTCACCTTTTATATAGGAGGTaGCAGAGATTCTCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: SMTSFIKSNSSPNLSPSHLLYRR*QRFSCS
Trigger: ACTGCAAGAGAATCTCTGCAACCTCCTATATAAAAG...GTGAGATGGGCTTAAGTTTGGGCTAGAGTTTGACTTTATGAAGGAGGTCATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp TTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTCTTTTATATAGGAGGTaGCAGAGATTCTCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: FTDLYVAFGQYHSVHQESLLYRR*QRFSCS
Trigger: ACTGCAAGAGAATCTCTGCAACCTCCTATATAAAAG...AGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000475283.2
CDS-3UTR CAA 90 bp CCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGTCAAACTCTAGCAAGTGCTTGAAACATTaGCCTACGTCACTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: PTSLFSFSMTSFIKSNSSKCLKH*PTSLFS
Trigger: AGAGAACAGTGACGTAGGCAAATGTTTCAAGCACTT...GCTAGAGTTTGACTTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp CTTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAACAAAAGGTGCCATCGTaGGGAATGAATGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LETFAYVTVLFFNDLLHKQKVPS*GMNVLL
Trigger: CAACAAGACATTCATTCCCAACGATGGCACCTTTTG...TTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp TTCACAGATCTGTATGTAGCCTTCGGTCAATATCACAGTGTACATCAGGAGTCTTGGGGTTTATTCTTCTaGAGTTTATTTGCCATCTCA +
Preference number: 5 (lower is better)
Translates to: FTDLYVAFGQYHSVHQESWGLFF*SLFAIS
Trigger: TGAGATGGCAAATAAACTCAAGAAGAATAAACCCCA...AGACTCCTGATGTACACTGTGATATTGACCGAAGGCTACATACAGATCTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS-3UTR CAA 90 bp CTTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAAAGGAATGAATGTCTTGTaGTTGTTTGTGGCTCGATAT +
Preference number: 5 (lower is better)
Translates to: LETFAYVTVLFFNDLLHKGMNVL*LFVARY
Trigger: ATATCGAGCCACAAACAACAACAAGACATTCATTCC...TTTATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS-3UTR CAA 90 bp TGCTTGAAACATTTGCCTACGTCACTGTTCTCTTTTTCAATGACCTCCTTCATAATCACATATGAGATCTaGGGGTTTATTCTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: CLKHLPTSLFSFSMTSFIITYEI*GFILLE
Trigger: CTCAAGAAGAATAAACCCCAAGATCTCATATGTGAT...TATGAAGGAGGTCATTGAAAAAGAGAACAGTGACGTAGGCAAATGTTTCAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374270.8
CDS TCA 72 bp CGTGGGAGTTTCTGCTACCAGCTGTCTGGAAACCGATaGCGGCTGGCATCGAGCGCCTGGGAGGTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: RGSFCYQLSGNR*RLASSAWEVLW
Trigger: CCACAGCACCTCCCAGGCGCTCGATGCCAGCCGTCATCGGTTTCCAGACAGCTGGTAGCAGAAACTCCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415074.1
CDS GCA 72 bp GAAACCGATGACGGCTGGCATCGAGCGCCTGGGAGGTaGTGTGGAGATGTTCACGGTGTAGTTGGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: ETDDGWHRAPGR*CGDVHGVVGAW
Trigger: CCAGGCACCAACTACACCGTGAACATCTCCACAGCACCTCCCAGGCGCTCGATGCCAGCCGTCATCGGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000415074.1
ENST00000528773.1
CDS CCA 72 bp GCCTGGGAGGTGCTGTGGAGATGTTCACGGTGTAGTTaGTGCCTGGGTACAGGGCTAGGCACACTTCTGGGG +
Preference number: 6 (lower is better)
Translates to: AWEVLWRCSRCS*CLGTGLGTLLG
Trigger: CCCCAGAAGTGTGCCTAGCCCTGTACCCAGGCACCAACTACACCGTGAACATCTCCACAGCACCTCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000415074.1
ENST00000528773.1
CDS GCA 72 bp TGGGAGGTGCTGTGGAGATGTTCACGGTGTAGTTGGTaGCTGGGTACAGGGCTAGGCACACTTCTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: WEVLWRCSRCSW*LGTGLGTLLGS
Trigger: GGACCCCAGAAGTGTGCCTAGCCCTGTACCCAGGCACCAACTACACCGTGAACATCTCCACAGCACCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000415074.1
ENST00000528773.1
CDS CCA 72 bp CTTCTCTTTGCTGGCATGTGGCATGTTCATGGCAAGTaGCACAGACGTCTAAACCGTCGGGGCCCGGCGCTC +
Preference number: 6 (lower is better)
Translates to: LLFAGMWHVHGK*HRRLNRRGPAL
Trigger: GAGCGCCGGGCCCCGACGGTTTAGACGTCTGTGCCACTTGCCATGAACATGCCACATGCCAGCAAAGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS CCA 72 bp CCTCTTGACAGACATAGCGAGCCACACCGCCCAGCCTaGAGCTGTGATTTCCTACCAAGATGGCGTGCCGCA +
Preference number: 6 (lower is better)
Translates to: PLDRHSEPHRPA*SCDFLPRWRAA
Trigger: TGCGGCACGCCATCTTGGTAGGAAATCACAGCTCCAGGCTGGGCGGTGTGGCTCGCTATGTCTGTCAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000415074.1
ENST00000482851.1
ENST00000532348.1
CDS TCA 72 bp CTTCTAAGAGATCAACTTCAGCTGTCTGGAAACCGATaGCGGCTGGCATCGAGCGCCTGGGAGGTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: LLRDQLQLSGNR*RLASSAWEVLW
Trigger: CCACAGCACCTCCCAGGCGCTCGATGCCAGCCGTCATCGGTTTCCAGACAGCTGAAGTTGATCTCTTAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000528773.1
CDS TCA 72 bp GGGAACCCAGTCCAACACCCGCCATCTGCAGCAGCATaGGTGACGAATCTTTCACCTGAGCCCAAACTGCAC +
Preference number: 6 (lower is better)
Translates to: GNPVQHPPSAAA*VTNLSPEPKLH
Trigger: GTGCAGTTTGGGCTCAGGTGAAAGATTCGTCACTCATGCTGCTGCAGATGGCGGGTGTTGGACTGGGTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374270.8
CDS CCA 72 bp GAGATCAACTTCAGCTGTCTGGAAACCGATGACGGCTaGCATCGAGCGCCTGGGAGGTGCTGTGGAGATGTT +
Preference number: 6 (lower is better)
Translates to: EINFSCLETDDG*HRAPGRCCGDV
Trigger: AACATCTCCACAGCACCTCCCAGGCGCTCGATGCCAGCCGTCATCGGTTTCCAGACAGCTGAAGTTGATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000528773.1
CDS CCA 72 bp TTCTTCCCTTCTCTTTGCTGGCATGTGGCATGTTCATaGCAAGTGGCACAGACGTCTAAACCGTCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: FFPSLCWHVACS*QVAQTSKPSGP
Trigger: GGGCCCCGACGGTTTAGACGTCTGTGCCACTTGCCATGAACATGCCACATGCCAGCAAAGAGAAGGGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS GCA 72 bp AGCTCCCATGAGTGTTCACGCATCGCCCTCCATGCCTaGACAGGCCAGAAACTTCACACTCATCTATGTCTG +
Preference number: 6 (lower is better)
Translates to: SSHECSRIALHA*TGQKLHTHLCL
Trigger: CAGACATAGATGAGTGTGAAGTTTCTGGCCTGTGCAGGCATGGAGGGCGATGCGTGAACACTCATGGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000482851.1
CDS CAA 90 bp AGCCTGTCTCCTATAGGTATCTCCATGGCATCATCTGGAACATCTTaGGCCAGTAGTTCTGCAGCCACGTATCCATCAGCATCAGAGGCG +
Preference number: 6 (lower is better)
Translates to: SLSPIGISMASSGTS*ASSSAATYPSASEA
Trigger: CGCCTCTGATGCTGATGGATACGTGGCTGCAGAACTACTGGCCAAAGATGTTCCAGATGATGCCATGGAGATACCTATAGGAGACAGGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS TCA 72 bp GGGAACCCAGTCCAACACCCGCCATCTGCAGCAGCATaGGTGACGAATCTTATTCCATTCACTTGTGATTCG +
Preference number: 6 (lower is better)
Translates to: GNPVQHPPSAAA*VTNLIPFTCDS
Trigger: CGAATCACAAGTGAATGGAATAAGATTCGTCACTCATGCTGCTGCAGATGGCGGGTGTTGGACTGGGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355396.7
ENST00000374263.7
CDS GCA 72 bp TGTTGTTGTTTGTGGCTCGATATCCTTCCAGGCAAATaGAATAGAAGCCCCCGGGGGTGTTGTGGCAAGATG +
Preference number: 6 (lower is better)
Translates to: CCCLWLDILPGK*NRSPRGCCGKM
Trigger: CATCTTGCCACAACACCCCCGGGGGCTTCTATTGCATTTGCCTGGAAGGATATCGAGCCACAAACAACAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS GCA 72 bp ACTGCTGGGGGAGTTGCTATTGTTATTTGCACTGAGTaGCGCTTAGGAGATCTCAGCAGGGTCACATTCACC +
Preference number: 6 (lower is better)
Translates to: TAGGVAIVICTE*RLGDLSRVTFT
Trigger: GGTGAATGTGACCCTGCTGAGATCTCCTAAGCGGCACTCAGTGCAAATAACAATAGCAACTCCCCCAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000529933.5
CDS CCA 72 bp TACCACAGTCTATTTCTGTGCATGATGTGGCATCGGTaGTCGGGTGGAAAGGTTCAGGTCCATTCCTTGGCA +
Preference number: 6 (lower is better)
Translates to: YHSLFLCMMWHR*SGGKVQVHSLA
Trigger: TGCCAAGGAATGGACCTGAACCTTTCCACCCGACCACCGATGCCACATCATGCACAGAAATAGACTGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000482851.1
CDS CCA 72 bp AGCAGCATGAGTGACGAATCTGTGTGTCCCCTGAGTTaGCCCTGTGGATATGCAGCCTCAGGAAATTACAGT +
Preference number: 6 (lower is better)
Translates to: SSMSDESVCPLS*PCGYAASGNYS
Trigger: ACTGTAATTTCCTGAGGCTGCATATCCACAGGGCCAACTCAGGGGACACACAGATTCGTCACTCATGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374264.6
CDS CAA 90 bp ATGATGTGGCATCGGTGGTCGGGTGGAAAGGTTCAGGTCCATTCCTaGGCAAGTATCCATCCATACAGTAGCATTCAAAGCTCCCATGAG +
Preference number: 6 (lower is better)
Translates to: MMWHRWSGGKVQVHS*ASIHPYSSIQSSHE
Trigger: CTCATGGGAGCTTTGAATGCTACTGTATGGATGGATACTTGCCAAGGAATGGACCTGAACCTTTCCACCCGACCACCGATGCCACATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000482851.1
CDS GCA 72 bp GTCTGTTTTACTGCTGGGGGAGTTGCTATTGTTATTTaGACTGAGTGCCGCTTAGGAGATCTCAGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: VCFTAGGVAIVI*TECRLGDLSRV
Trigger: GACCCTGCTGAGATCTCCTAAGCGGCACTCAGTGCAAATAACAATAGCAACTCCCCCAGCAGTAAAACAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000529933.5
CDS GCA 72 bp AGAAGGAGGAAGCGCCTTCAGAATCACAAGAAAATGTaGTTTGGAGGGCCAGGGGAAGCACTAACACCTGAT +
Preference number: 6 (lower is better)
Translates to: RRRKRLQNHKKM*FGGPGEALTPD
Trigger: ATCAGGTGTTAGTGCTTCCCCTGGCCCTCCAAAGCACATTTTCTTGTGATTCTGAAGGCGCTTCCTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS CCA 72 bp TCTATTTCTGTGCATGATGTGGCATCGGTGGTCGGGTaGAAAGGTTCAGGTCCATTCCTTGGCAAGTATCCA +
Preference number: 6 (lower is better)
Translates to: SISVHDVASVVG*KGSGPFLGKYP
Trigger: TGGATACTTGCCAAGGAATGGACCTGAACCTTTCCACCCGACCACCGATGCCACATCATGCACAGAAATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000482851.1
CDS TCA 72 bp TTTTACTGCTGGGGGAGTTGCTATTGTTATTTGCACTaGGTGCCGCTTAGGAGATCTCAGCAGGGTCACATT +
Preference number: 6 (lower is better)
Translates to: FYCWGSCYCYLH*VPLRRSQQGHI
Trigger: AATGTGACCCTGCTGAGATCTCCTAAGCGGCACTCAGTGCAAATAACAATAGCAACTCCCCCAGCAGTAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000529933.5
CDS GCA 72 bp CGAATCTGTGTGTCCCCTGAGTTGGCCCTGTGGATATaGAGCCTCAGGAAATTACAGTTACAAGGTATTTCT +
Preference number: 6 (lower is better)
Translates to: RICVSPELALWI*SLRKLQLQGIS
Trigger: AGAAATACCTTGTAACTGTAATTTCCTGAGGCTGCATATCCACAGGGCCAACTCAGGGGACACACAGATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374264.6
CDS GCA 72 bp AGGCACTTGTTCCCTCGTTGTGAAGTTAAACGATGTTaGATGAGAAAAGTTAGCCAGATACCACCTCTGACC +
Preference number: 6 (lower is better)
Translates to: RHLFPRCEVKRC*MRKVSQIPPLT
Trigger: GGTCAGAGGTGGTATCTGGCTAACTTTTCTCATGCAACATCGTTTAACTTCACAACGAGGGAACAAGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000529933.5
CDS CCA 72 bp TGTTGTGGCAAGATGTGTGGTTCCCACAGACAAGAGTaGCTCCAAACTGGCACTCATTTTTATCAACACACT +
Preference number: 6 (lower is better)
Translates to: CCGKMCGSHRQE*LQTGTHFYQHT
Trigger: AGTGTGTTGATAAAAATGAGTGCCAGTTTGGAGCCACTCTTGTCTGTGGGAACCACACATCTTGCCACAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS CAA 72 bp TCCATAGTTGCAAATACAGATCTTCTTCCCTTCTCTTaGCTGGCATGTGGCATGTTCATGGCAAGTGGCACA +
Preference number: 6 (lower is better)
Translates to: SIVANTDLLPFS*LACGMFMASGT
Trigger: TGTGCCACTTGCCATGAACATGCCACATGCCAGCAAAGAGAAGGGAAGAAGATCTGTATTTGCAACTATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS CAA 72 bp AGTCGTAGGGTACAGATCCAAACACACTACAGGCACTaGTTCCCTCGTTGTGAAGTTAAACGATGTTGCATG +
Preference number: 6 (lower is better)
Translates to: SRRVQIQTHYRH*FPRCEVKRCCM
Trigger: CATGCAACATCGTTTAACTTCACAACGAGGGAACAAGTGCCTGTAGTGTGTTTGGATCTGTACCCTACGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000529933.5
CDS CAA 72 bp TTCACACTCATCTATGTCTGCAACCAGCTCCTGAGCTaGATGTTGACTCTGCAAAGCACAATAAACACCTGG +
Preference number: 6 (lower is better)
Translates to: FTLIYVCNQLLS*MLTLQSTINTW
Trigger: CCAGGTGTTTATTGTGCTTTGCAGAGTCAACATCAAGCTCAGGAGCTGGTTGCAGACATAGATGAGTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482851.1
CDS CAA 72 bp GAACCCACTCTGACTCCAGTCAAAACAATCCAGGATTaGTGGTGCTGGAGCCCATTCTCCTACTATTCTATT +
Preference number: 6 (lower is better)
Translates to: EPTLTPVKTIQD*WCWSPFSYYSI
Trigger: AATAGAATAGTAGGAGAATGGGCTCCAGCACCACAAATCCTGGATTGTTTTGACTGGAGTCAGAGTGGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528773.1
CDS CCA 72 bp CCCACTCTGACTCCAGTCAAAACAATCCAGGATTTGTaGTGCTGGAGCCCATTCTCCTACTATTCTATTTTA +
Preference number: 6 (lower is better)
Translates to: PTLTPVKTIQDL*CWSPFSYYSIL
Trigger: TAAAATAGAATAGTAGGAGAATGGGCTCCAGCACCACAAATCCTGGATTGTTTTGACTGGAGTCAGAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528773.1
CDS CAA 72 bp CAAAAGGTGCCATCGTTGGGAATGAATGTCTTGTTGTaGTTTGTGGCTCGATATCCTTCCAGGCAAATGCAA +
Preference number: 6 (lower is better)
Translates to: QKVPSLGMNVLL*FVARYPSRQMQ
Trigger: TTGCATTTGCCTGGAAGGATATCGAGCCACAAACAACAACAAGACATTCATTCCCAACGATGGCACCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS CAA 72 bp GTACAAAAGGTGCCATCGTTGGGAATGAATGTCTTGTaGTTGTTTGTGGCTCGATATCCTTCCAGGCAAATG +
Preference number: 6 (lower is better)
Translates to: VQKVPSLGMNVL*LFVARYPSRQM
Trigger: CATTTGCCTGGAAGGATATCGAGCCACAAACAACAACAAGACATTCATTCCCAACGATGGCACCTTTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS CAA 72 bp TCTGTACAAAAGGTGCCATCGTTGGGAATGAATGTCTaGTTGTTGTTTGTGGCTCGATATCCTTCCAGGCAA +
Preference number: 6 (lower is better)
Translates to: SVQKVPSLGMNV*LLFVARYPSRQ
Trigger: TTGCCTGGAAGGATATCGAGCCACAAACAACAACAAGACATTCATTCCCAACGATGGCACCTTTTGTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS TCA 72 bp CCTCTGACCCAGAACGGTAAATTGGTACATGTGTTCTaGTCCAACTTTCCTAGAACGCCTGTTCAATTTCAA +
Preference number: 6 (lower is better)
Translates to: PLTQNGKLVHVF*SNFPRTPVQFQ
Trigger: TTGAAATTGAACAGGCGTTCTAGGAAAGTTGGATCAGAACACATGTACCAATTTACCGTTCTGGGTCAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000415074.1
ENST00000529933.5
CDS GCA 72 bp ACAGTTACAAGGTATTTCTTTCACCTGAGCCCAAACTaGACAGGAGTGTCTTCTCACCTTATTCCATTCACT +
Preference number: 6 (lower is better)
Translates to: TVTRYFFHLSPN*TGVSSHLIPFT
Trigger: AGTGAATGGAATAAGGTGAGAAGACACTCCTGTGCAGTTTGGGCTCAGGTGAAAGAAATACCTTGTAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374264.6
CDS CCA 72 bp CAGACTAGACGTATAATTTCCTATGATATAGCCATCTaGAACCTCAGGAGGGGTACCACAGTCTATTTCTGT +
Preference number: 6 (lower is better)
Translates to: QTRRIISYDIAI*NLRRGTTVYFC
Trigger: ACAGAAATAGACTGTGGTACCCCTCCTGAGGTTCCAGATGGCTATATCATAGGAAATTATACGTCTAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000482851.1
CDS CAA 72 bp TCACACTCATCTATGTCTGTACAAAAGGTGCCATCGTaGGGAATGAATGTCTTGTTGTTGTTTGTGGCTCGA +
Preference number: 6 (lower is better)
Translates to: SHSSMSVQKVPS*GMNVLLLFVAR
Trigger: TCGAGCCACAAACAACAACAAGACATTCATTCCCAACGATGGCACCTTTTGTACAGACATAGATGAGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS CAA 90 bp CGTATAATCAGTCGTAGGGTACAGATCCAAACACACTACAGGCACTaGTTCCCTCGTTGTGAAGTTAAACGATGTTGCATGAGAAAAGTT +
Preference number: 6 (lower is better)
Translates to: RIISRRVQIQTHYRH*FPRCEVKRCCMRKV
Trigger: AACTTTTCTCATGCAACATCGTTTAACTTCACAACGAGGGAACAAGTGCCTGTAGTGTGTTTGGATCTGTACCCTACGACTGATTATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000529933.5
CDS CAA 90 bp AAGACAAGAGAACCCACTCTGACTCCAGTCAAAACAATCCAGGATTaGTGGTGCTGGAGCCCATTCTCCTACTATTCTATTTTATACTGT +
Preference number: 6 (lower is better)
Translates to: KTREPTLTPVKTIQD*WCWSPFSYYSILYC
Trigger: ACAGTATAAAATAGAATAGTAGGAGAATGGGCTCCAGCACCACAAATCCTGGATTGTTTTGACTGGAGTCAGAGTGGGTTCTCTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528773.1
CDS TCA 72 bp CATCTATGTCTGTACAAAAGGTGCCATCGTTGGGAATaGATGTCTTGTTGTTGTTTGTGGCTCGATATCCTT +
Preference number: 6 (lower is better)
Translates to: HLCLYKRCHRWE*MSCCCLWLDIL
Trigger: AAGGATATCGAGCCACAAACAACAACAAGACATTCATTCCCAACGATGGCACCTTTTGTACAGACATAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
CDS TCA 72 bp TTCCATCATCTTCTAAGAGATCAACTTATTATCCAATaGAAAGGAGGATCAAAGGGAAGGCCATCCATTTTA +
Preference number: 6 (lower is better)
Translates to: FHHLLRDQLIIQ*KGGSKGRPSIL
Trigger: TAAAATGGATGGCCTTCCCTTTGATCCTCCTTTTCATTGGATAATAAGTTGATCTCTTAGAAGATGATGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529933.5
CDS CCA 72 bp ACCGTTGTCCTTTTATGGATATCACATATGAGATCTTaGGGTTTATTCTTCTTGAGTTTATTTGCCATCTCA +
Preference number: 6 (lower is better)
Translates to: TVVLLWISHMRS*GLFFLSLFAIS
Trigger: TGAGATGGCAAATAAACTCAAGAAGAATAAACCCCAAGATCTCATATGTGATATCCATAAAAGGACAACGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000415074.1
CDS GCA 72 bp TATGAGATCTTGGGGTTTATTCTTCTTGAGTTTATTTaGCATCTCACACAGGTATCATTAAACAGTGATACA +
Preference number: 6 (lower is better)
Translates to: YEILGFILLEFI*HLTQVSLNSDT
Trigger: TGTATCACTGTTTAATGATACCTGTGTGAGATGGCAAATAAACTCAAGAAGAATAAACCCCAAGATCTCATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355396.7
ENST00000374263.7
ENST00000374264.6
ENST00000374270.8
ENST00000415074.1