RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SURF6 (Homo sapiens)

Ensembl gene IDs: ENSG00000148296

Ensembl transcript IDs: ENST00000372022.6, ENST00000468290.1, ENST00000628950.1, ENST00000629980.2

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTTCCCAGACGCTGGCGTCACCGCTAGACCAAGGAGCCCTCTGGTaGCCCTGTCCGGGCATAACAGAAGGCTCGCACTCTTGTCTTCTG +
Preference number: 1 (lower is better)
Translates to: SSQTLASPLDQGALW*PCPGITEGSHSCLL
Trigger: CAGAAGACAAGAGTGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGCGGTGACGCCAGCGTCTGGGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CCA 90 bp GTCACGTGGATCACGTGTCCACTGGACAGGGTGCCCTTCCCTGCCTaGCAGCCGAGGCAGAGAGAGAGAGGAGACAGAGAGAAAGACAGC +
Preference number: 1 (lower is better)
Translates to: VTWITCPLDRVPFPA*QPRQRERGDREKDS
Trigger: GCTGTCTTTCTCTCTGTCTCCTCTCTCTCTCTGCCTCGGCTGCCAGGCAGGGAAGGGCACCCTGTCCAGTGGACACGTGATCCACGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 90 bp CATCACAGGGAGACGGTTAGGCCTCCAGATAACTGCGGGCAGGCCTaGCGGATGTCAGGCCCTCCACAAGAGGTGGAAGAGCAGAGTCTT +
Preference number: 1 (lower is better)
Translates to: HHRETVRPPDNCGQA*RMSGPPQEVEEQSL
Trigger: AAGACTCTGCTCTTCCACCTCTTGTGGAGGGCCTGACATCCGGCAGGCCTGCCCGCAGTTATCTGGAGGCCTAACCGTCTCCCTGTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CCA 90 bp ATAACTGCGGGCAGGCCTGCCGGATGTCAGGCCCTCCACAAGAGGTaGAAGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACAC +
Preference number: 1 (lower is better)
Translates to: ITAGRPAGCQALHKR*KSRVFSKLLQGKGH
Trigger: GTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCTTCCACCTCTTGTGGAGGGCCTGACATCCGGCAGGCCTGCCCGCAGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CCA 90 bp TACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTaGCTTGCCGCCCACAGGTATTTGGTAACTTCCCTTTCTCTTACC +
Preference number: 1 (lower is better)
Translates to: YWNSSCPLSLASAPG*LAAHRYLVTSLSLT
Trigger: GGTAAGAGAAAGGGAAGTTACCAAATACCTGTGGGCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 90 bp GAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTaGCGCCCACAGGTATTTGGTAACTTCCCTTTCTCTTACCTAGTT +
Preference number: 1 (lower is better)
Translates to: EQLVSSVSCLGAWVA*RPQVFGNFPFSYLV
Trigger: AACTAGGTAAGAGAAAGGGAAGTTACCAAATACCTGTGGGCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CCA 90 bp CAGGGTAAAGAGTGTGAGTCATCTCCAATGATAGGTAAGGTCACGTaGATCACGTGTCCACTGGACAGGGTGCCCTTCCCTGCCTGGCAG +
Preference number: 1 (lower is better)
Translates to: QGKECESSPMIGKVT*ITCPLDRVPFPAWQ
Trigger: CTGCCAGGCAGGGAAGGGCACCCTGTCCAGTGGACACGTGATCCACGTGACCTTACCTATCATTGGAGATGACTCACACTCTTTACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CCA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTaGGTGGCTTGCCGCCCACAGGTATTTGGTAACTTCCCTTTCTCT +
Preference number: 1 (lower is better)
Translates to: IILEQLVSSVSCLGA*VACRPQVFGNFPFS
Trigger: AGAGAAAGGGAAGTTACCAAATACCTGTGGGCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 90 bp CATGCTCACCTCACATCCTATCTTTCACAGGGCTTTTTCATCAGTTaGCTCTGTCTGGTAACAGTCACACCAGCTCCTGTTCAGTTACAG +
Preference number: 1 (lower is better)
Translates to: HAHLTSYLSQGFFIS*LCLVTVTPAPVQLQ
Trigger: CTGTAACTGAACAGGAGCTGGTGTGACTGTTACCAGACAGAGGCAACTGATGAAAAAGCCCTGTGAAAGATAGGATGTGAGGTGAGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 90 bp CAGCCGAGGCAGAGAGAGAGAGGAGACAGAGAGAAAGACAGCTTATaGCATTACTTCTGCATATCAGAGACTTTTAGTACTTTCACTAAT +
Preference number: 1 (lower is better)
Translates to: QPRQRERGDREKDSL*HYFCISETFSTFTN
Trigger: ATTAGTGAAAGTACTAAAAGTCTCTGATATGCAGAAGTAATGGCATAAGCTGTCTTTCTCTCTGTCTCCTCTCTCTCTCTGCCTCGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 90 bp TATTCTTTTCAGATACTGTTGTGTCTGTCTCTCAGCTCAAGCTCATaGTCACCTCACATCCTATCTTTCACAGGGCTTTTTCATCAGTTG +
Preference number: 1 (lower is better)
Translates to: YSFQILLCLSLSSSS*SPHILSFTGLFHQL
Trigger: CAACTGATGAAAAAGCCCTGTGAAAGATAGGATGTGAGGTGAGCATGAGCTTGAGCTGAGAGACAGACACAACAGTATCTGAAAAGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CCA 90 bp TTCTGGTCACACCTATGTCCCCTCAGCTCCTATCTCTGTATGGCCTaGTTTTTCCTAGGCTATGATTATAGAGCGAGGATTATTATAATA +
Preference number: 1 (lower is better)
Translates to: FWSHLCPLSSYLCMA*FFLGYDYRARIIII
Trigger: TATTATAATAATCCTCGCTCTATAATCATAGCCTAGGAAAAACCAGGCCATACAGAGATAGGAGCTGAGGGGACATAGGTGTGACCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 90 bp ACTTCTGCATATCAGAGACTTTTAGTACTTTCACTAATTTACTACTaGTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAAG +
Preference number: 1 (lower is better)
Translates to: TSAYQRLLVLSLIYY*YLEGRARCTGWNMK
Trigger: CTTCATGTTCCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATTAGTGAAAGTACTAAAAGTCTCTGATATGCAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 90 bp TTTCTGGACAAAGTAGGTGGTCAGTTTCCATCCATGTTCCATATATaGATGGAAAGAGTATGTATTCTTTTCAGATACTGTTGTGTCTGT +
Preference number: 1 (lower is better)
Translates to: FLDKVGGQFPSMFHI*MERVCILFRYCCVC
Trigger: ACAGACACAACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGGAAACTGACCACCTACTTTGTCCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 90 bp AGAGAGAGAGGAGACAGAGAGAAAGACAGCTTATGCCATTACTTCTaGATATCAGAGACTTTTAGTACTTTCACTAATTTACTACTGCTA +
Preference number: 1 (lower is better)
Translates to: RERGDREKDSLCHYF*ISETFSTFTNLLLL
Trigger: TAGCAGTAGTAAATTAGTGAAAGTACTAAAAGTCTCTGATATGCAGAAGTAATGGCATAAGCTGTCTTTCTCTCTGTCTCCTCTCTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR TCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCACCGTTCCTCCTCCCTaGCCCTGCAAACCTCGGGGA +
Preference number: 2 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGATVPPP*PCKPRG
Trigger: TCCCCGAGGTTTGCAGGGTCAGGGAGGAGGAACGGT...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCCTGTCCCGTGGCTCCTaGGAACACAGGCAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGALSRGS*EHRQWG
Trigger: TCCCCACTGCCTGTGTTCGCAGGAGCCACGGGACAG...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CCA 90 bp TCTGCCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGAGAGGCCGAGGTCTGTaGAGATCCTGGGACAGAGCC +
Preference number: 2 (lower is better)
Translates to: SAPGCTTPGRAPPTPSARRGRGL*RSWDRA
Trigger: GGCTCTGTCCCAGGATCTCCACAGACCTCGGCCTCT...CCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCACTCAGAGGGTGTCCTaGAGTCTCCTAGGACGGAAG +
Preference number: 2 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGATQRVS*SLLGRK
Trigger: CTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGT...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR TCA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCAGTGGGGAACAGGCAGTaGCTGCCCACCCCCACCGTT +
Preference number: 2 (lower is better)
Translates to: ARPRSPLVALSGHNRRLAVGNRQ*LPTPTV
Trigger: AACGGTGGGGGTGGGCAGTCACTGCCTGTTCCCCAC...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CCA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCAAGCTGCGGACTAACGTaGCCCGGCAGCAGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: ARPRSPLVALSGHNRRLASCGLT*PGSRGH
Trigger: GTGGCCTCTGCTGCCGGGCCACGTTAGTCCGCAGCT...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp GCCCGGGAGACCACTACTACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCGGAACAGGCAGTGACTaGCCACCCCCACCGTTCCTC +
Preference number: 2 (lower is better)
Translates to: ARETTTTNARRPVVAPNVGTGSD*PPPPFL
Trigger: GAGGAACGGTGGGGGTGGGCAGTCACTGCCTGTTCC...GACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR TCA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTCCCTTTCCCTGGGTCTaGAGGTCCCGGATCCTGCGT +
Preference number: 2 (lower is better)
Translates to: IILEQLVSSVSCLGAWVAPFPWV*RSRILR
Trigger: ACGCAGGATCCGGGACCTTCAGACCCAGGGAAAGGG...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR TCA 90 bp GCCCGGGAGACCACTACTACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCCCTCCCTCCAAATTCTaGGCAGTAAAATGCCGCCCC +
Preference number: 2 (lower is better)
Translates to: ARETTTTNARRPVVAPNVPPSKF*AVKCRP
Trigger: GGGGCGGCATTTTACTGCTCAGAATTTGGAGGGAGG...GACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTCACCACGCCTGGACGTaGTCCCCCGACTCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: HNRRLALLSSGHTYVPSAHHAWT*SPDSQC
Trigger: GCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTG...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTCACCCAGGCTGGAGTaGAGCGGCTCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: IILEQLVSSVSCLGAWVASPRLE*SGSILA
Trigger: AGCCAAGATCGAGCCGCTGCACTCCAGCCTGGGTGA...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTTCCCCCGACTCCCAGTaGCAGGTGCCCATATGCCAC +
Preference number: 2 (lower is better)
Translates to: RAESSLNSSRERDTPFPGSPDSQ*QVPICH
Trigger: GTGGCATATGGGCACCTGGCACTGGGAGTCGGGGGA...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTGGAGCCATGGCGTTCTaGCCCAGGATGCACCACGCC +
Preference number: 2 (lower is better)
Translates to: HNRRLALLSSGHTYVPSAGAMAF*PRMHHA
Trigger: GGCGTGGTGCATCCTGGGGCAGAACGCCATGGCTCC...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACCAGGGTGCCCTTCCCTaGCTGGCAGCCGAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: SETGSGPECLAALLFIGYQGALP*LAAEAE
Trigger: CTCTGCCTCGGCTGCCAGGCAGGGAAGGGCACCCTG...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR TCA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTCTCACATGGGATCTGTaGTCTGGGCCCTCACAACTC +
Preference number: 2 (lower is better)
Translates to: IILEQLVSSVSCLGAWVALTWDL*SGPSQL
Trigger: GAGTTGTGAGGGCCCAGATCACAGATCCCATGTGAG...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR TCA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTCCTCCCTCCAAATTCTaGGCAGTAAAATGCCGCCCC +
Preference number: 2 (lower is better)
Translates to: IILEQLVSSVSCLGAWVAPPSKF*AVKCRP
Trigger: GGGGCGGCATTTTACTGCTCAGAATTTGGAGGGAGG...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CCA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACAGCGGGGAGGAGCCATaGCGTTCTGCCCCAGGATGC +
Preference number: 2 (lower is better)
Translates to: SETGSGPECLAALLFIGYSGEEP*RSAPGC
Trigger: GCATCCTGGGGCAGAACGCCATGGCTCCTCCCCGCT...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CCA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTCAAGGAGCCCTCTGGTaGCCCTGTCCGGGCATAACA +
Preference number: 2 (lower is better)
Translates to: RAESSLNSSRERDTPFPGQGALW*PCPGIT
Trigger: TGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTG...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACCTGTCCCGTGGCTCCTaGGAACACAGGCAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: SETGSGPECLAALLFIGYLSRGS*EHRQWG
Trigger: TCCCCACTGCCTGTGTTCGCAGGAGCCACGGGACAG...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACCGTTCTGCCCCAGGATaGACCACGCCTGGACGTGCT +
Preference number: 2 (lower is better)
Translates to: SETGSGPECLAALLFIGYRSAPG*TTPGRA
Trigger: AGCACGTCCAGGCGTGGTGCATCCTGGGGCAGAACG...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR TCA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTCTCACATGGGATCTGTaGTCTGGGCCCTCACAACTC +
Preference number: 2 (lower is better)
Translates to: RAESSLNSSRERDTPFPGLTWDL*SGPSQL
Trigger: GAGTTGTGAGGGCCCAGATCACAGATCCCATGTGAG...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR TCA 90 bp CTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTGCCGCACTCAATTTCATCAGTaGTTACAACTCAGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: LEQLVSSVSCLGAWVACRTQFHQ*LQLRLS
Trigger: AGAAAGCCTGAGTTGTAATCACTGATGAAATTGAGT...GCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTCAGCATGAGCCACCATaGCAGGCCCTGTTCCACAAA +
Preference number: 2 (lower is better)
Translates to: RAESSLNSSRERDTPFPGQHEPP*QALFHK
Trigger: TTTGTGGAACAGGGCCTGGCATGGTGGCTCATGCTG...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CAA 90 bp AGGGACACTCCCTTTCCCGGTCTGCTAAGTAGCGGGTGTTGTTCCTaGATACTTTTTGCTACTGCTAGACCATGGTCCACCTGGCAACGG +
Preference number: 2 (lower is better)
Translates to: RDTPFPGLLSSGCCS*ILFATARPWSTWQR
Trigger: CCGTTGCCAGGTGGACCATGGTCTAGCAGTAGCAAAAAGTATCAAGGAACAACACCCGCTACTTAGCAGACCGGGAAAGGGAGTGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR TCA 90 bp GTAACAGTCACACCAGCTCCTGTTCAGTTACAGTCTTTGTCTCATAACCGGAGACCCTTTCCCTGGGTCTaGAGGTCCCGGATCCTGCGT +
Preference number: 2 (lower is better)
Translates to: VTVTPAPVQLQSLSHNRRPFPWV*RSRILR
Trigger: ACGCAGGATCCGGGACCTTCAGACCCAGGGAAAGGG...TCTCCGGTTATGAGACAAAGACTGTAACTGAACAGGAGCTGGTGTGACTGTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACACTCCCAGTGCCAGGTaGCCATATGCCACACCTCAG +
Preference number: 2 (lower is better)
Translates to: SETGSGPECLAALLFIGYTPSAR*PYATPQ
Trigger: CTGAGGTGTGGCATATGGGCACCTGGCACTGGGAGT...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR TCA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTAACCTGCACTCATTTTaGTTGCCTGGAACTCTGGAT +
Preference number: 2 (lower is better)
Translates to: IILEQLVSSVSCLGAWVANLHSF*LPGTLD
Trigger: ATCCAGAGTTCCAGGCAATCAAAATGAGTGCAGGTT...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR TCA 90 bp GCCCGGGAGACCACTACTACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCACTCAATTTCATCAGTaGTTACAACTCAGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: ARETTTTNARRPVVAPNVTQFHQ*LQLRLS
Trigger: AGAAAGCCTGAGTTGTAATCACTGATGAAATTGAGT...GACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTATGGGATCTGTGATCTaGGCCCTCACAACTCAGCAG +
Preference number: 2 (lower is better)
Translates to: HNRRLALLSSGHTYVPSAMGSVI*ALTTQQ
Trigger: CTGCTGAGTTGTGAGGGCCCAGATCACAGATCCCAT...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp AATTTACTACTGCTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAATCCCCCGACTCCCAGTaGCAGGTGCCCATATGCCAC +
Preference number: 2 (lower is better)
Translates to: NLLLLSRRQSQVYRMEHESPDSQ*QVPICH
Trigger: GTGGCATATGGGCACCTGGCACTGGGAGTCGGGGGA...TTCATGTTCCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp TTGTTTTATATTTTATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGCACCACGCCTGGACGTaGTCCCCCGACTCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: LFYILLYWNSSCPLSLASHHAWT*SPDSQC
Trigger: GCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTG...CGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAATAAAATATAAAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR TCA 90 bp TTGTTTTATATTTTATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGTGGGGAACAGGCAGTaGCTGCCCACCCCCACCGTT +
Preference number: 2 (lower is better)
Translates to: LFYILLYWNSSCPLSLASVGNRQ*LPTPTV
Trigger: AACGGTGGGGGTGGGCAGTCACTGCCTGTTCCCCAC...CGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAATAAAATATAAAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR TCA 90 bp AATTTACTACTGCTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAAGGCGGACTAGGAGCGTaGCCACTGAAGCACAGCATC +
Preference number: 2 (lower is better)
Translates to: NLLLLSRRQSQVYRMEHEGGLGA*PLKHSI
Trigger: GATGCTGTGCTTCAGTGGTCACGCTCCTAGTCCGCC...TTCATGTTCCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp TTGTTTTATATTTTATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGGAGCCATGGCGTTCTaGCCCAGGATGCACCACGCC +
Preference number: 2 (lower is better)
Translates to: LFYILLYWNSSCPLSLASGAMAF*PRMHHA
Trigger: GGCGTGGTGCATCCTGGGGCAGAACGCCATGGCTCC...CGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAATAAAATATAAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CCA 90 bp TTGTTTTATATTTTATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGAGCTGCGGACTAACGTaGCCCGGCAGCAGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: LFYILLYWNSSCPLSLASSCGLT*PGSRGH
Trigger: GTGGCCTCTGCTGCCGGGCCACGTTAGTCCGCAGCT...CGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAATAAAATATAAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR TCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTAACCTGCACTCATTTTaGTTGCCTGGAACTCTGGAT +
Preference number: 2 (lower is better)
Translates to: HNRRLALLSSGHTYVPSANLHSF*LPGTLD
Trigger: ATCCAGAGTTCCAGGCAATCAAAATGAGTGCAGGTT...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CCA 90 bp GTAACAGTCACACCAGCTCCTGTTCAGTTACAGTCTTTGTCTCATAACCGGAGAATGGGATCTGTGATCTaGGCCCTCACAACTCAGCAG +
Preference number: 2 (lower is better)
Translates to: VTVTPAPVQLQSLSHNRRMGSVI*ALTTQQ
Trigger: CTGCTGAGTTGTGAGGGCCCAGATCACAGATCCCAT...TCTCCGGTTATGAGACAAAGACTGTAACTGAACAGGAGCTGGTGTGACTGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CCA 90 bp ATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGACTTCTAGCGGGGAGGAGCCATaGCGTTCTGCCCCAGGATGC +
Preference number: 2 (lower is better)
Translates to: IGIRSDNDTDSLKYLKTSSGEEP*RSAPGC
Trigger: GCATCCTGGGGCAGAACGCCATGGCTCCTCCCCGCT...AGAAGTCTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGGGAACAGGCAGTGACTaGCCACCCCCACCGTTCCTC +
Preference number: 2 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKGTGSD*PPPPFL
Trigger: GAGGAACGGTGGGGGTGGGCAGTCACTGCCTGTTCC...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp AATTTACTACTGCTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAATCGATCTTGGCTCACTaGAGCCTCTACCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: NLLLLSRRQSQVYRMEHESILAH*SLYLLG
Trigger: ACCCAGGAGGTAGAGGCTGCAGTGAGCCAAGATCGA...TTCATGTTCCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CCA 90 bp AATTTACTACTGCTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAAAGCCTCCCAAGCAGCTaGGACTACAGGTTTGCACCA +
Preference number: 2 (lower is better)
Translates to: NLLLLSRRQSQVYRMEHESLPSS*DYRFAP
Trigger: TGGTGCAAACCTGTAGTCCCAGCTGCTTGGGAGGCT...TTCATGTTCCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CAA 90 bp TCATGCTCACCTCACATCCTATCTTTCACAGGGCTTTTTCATCAGTaGCCTCTGTCTGGTAACAGTCACACCAGCTCCTGTTCAGTTACA +
Preference number: 2 (lower is better)
Translates to: SCSPHILSFTGLFHQ*PLSGNSHTSSCSVT
Trigger: TGTAACTGAACAGGAGCTGGTGTGACTGTTACCAGACAGAGGCAACTGATGAAAAAGCCCTGTGAAAGATAGGATGTGAGGTGAGCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTCGTTCTGCCCCAGGATaGACCACGCCTGGACGTGCT +
Preference number: 2 (lower is better)
Translates to: PSMFHICMERVCILFRYCRSAPG*TTPGRA
Trigger: AGCACGTCCAGGCGTGGTGCATCCTGGGGCAGAACG...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CCA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGTGTGTCCCCCTCACATaGAGAGGCCGAGGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKCVPLT*RGRGLW
Trigger: CCACAGACCTCGGCCTCTCCATGTGAGGGGGACACA...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CCA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTAGAGGCCGAGGTCTGTaGAGATCCTGGGACAGAGCC +
Preference number: 2 (lower is better)
Translates to: PSMFHICMERVCILFRYCRGRGL*RSWDRA
Trigger: GGCTCTGTCCCAGGATCTCCACAGACCTCGGCCTCT...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CCA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGACTCAGAGGGTGTCCTaGAGTCTCCTAGGACGGAAG +
Preference number: 2 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKTQRVS*SLLGRK
Trigger: CTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGT...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CCA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACGAATTTGTCTACGTCTaGAATTACCTGTTCTCTATA +
Preference number: 2 (lower is better)
Translates to: SETGSGPECLAALLFIGYEFVYV*NYLFSI
Trigger: TATAGAGAACAGGTAATTCCAGACGTAGACAAATTC...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTACTCCGGGAAGGTACTaGTCCCTCCCTCCAAATTCT +
Preference number: 2 (lower is better)
Translates to: PSMFHICMERVCILFRYCTPGRY*SLPPNS
Trigger: AGAATTTGGAGGGAGGGAGCAGTACCTTCCCGGAGT...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CAA 90 bp GTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTaGTGTCTGTCTCTCAGCTCAAGCTCATGCTCACCTCACATCCTA +
Preference number: 2 (lower is better)
Translates to: VPYMHGKSMYSFQIL*CLSLSSSSCSPHIL
Trigger: TAGGATGTGAGGTGAGCATGAGCTTGAGCTGAGAGACAGACACAACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp AATTTACTACTGCTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAATCCCACTTTGTATCTTaGATTCACTTCACTCTCTCT +
Preference number: 2 (lower is better)
Translates to: NLLLLSRRQSQVYRMEHESHFVS*IHFTLS
Trigger: AGAGAGAGTGAAGTGAATGCAAGATACAAAGTGGGA...TTCATGTTCCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTCTCAGCTCAAGCTCATaGTCACCTCACATCCTATCT +
Preference number: 2 (lower is better)
Translates to: PSMFHICMERVCILFRYCLSSSS*SPHILS
Trigger: AGATAGGATGTGAGGTGAGCATGAGCTTGAGCTGAG...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR GCA 90 bp TTGTTTTATATTTTATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGTCCCACTTTGTATCTTaGATTCACTTCACTCTCTCT +
Preference number: 2 (lower is better)
Translates to: LFYILLYWNSSCPLSLASSHFVS*IHFTLS
Trigger: AGAGAGAGTGAAGTGAATGCAAGATACAAAGTGGGA...CGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAATAAAATATAAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CCA 72 bp GGGACAGAGCCAGCGTCAAGGACTCAGAGGGTGTCCTaGAGTCTCCTAGGACGGAAGACGGCGGCCCCAGGT +
Preference number: 3 (lower is better)
Translates to: GTEPASRTQRVS*SLLGRKTAAPG
Trigger: ACCTGGGGCCGCCGTCTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTCTGTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CCA 72 bp ACGCTGGCGTCACCGCTAGACCAAGGAGCCCTCTGGTaGCCCTGTCCGGGCATAACAGAAGGCTCGCACTCT +
Preference number: 3 (lower is better)
Translates to: TLASPLDQGALW*PCPGITEGSHS
Trigger: AGAGTGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGCGGTGACGCCAGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 72 bp GAGACGGTTAGGCCTCCAGATAACTGCGGGCAGGCCTaGCGGATGTCAGGCCCTCCACAAGAGGTGGAAGAG +
Preference number: 3 (lower is better)
Translates to: ETVRPPDNCGQA*RMSGPPQEVEE
Trigger: CTCTTCCACCTCTTGTGGAGGGCCTGACATCCGGCAGGCCTGCCCGCAGTTATCTGGAGGCCTAACCGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 72 bp GTAAGGTCACGTGGATCACGTGTCCACTGGACAGGGTaGCCTTCCCTGCCTGGCAGCCGAGGCAGAGAGAGA +
Preference number: 3 (lower is better)
Translates to: VRSRGSRVHWTG*PSLPGSRGRER
Trigger: TCTCTCTCTGCCTCGGCTGCCAGGCAGGGAAGGGCACCCTGTCCAGTGGACACGTGATCCACGTGACCTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 72 bp AAAAGGCAGCTGGGCCCGGGAGACCACTACTACCAATaGTCGGAGACCGGTAGTGGCCCCGAATGTCTGGCT +
Preference number: 3 (lower is better)
Translates to: KRQLGPGDHYYQ*SETGSGPECLA
Trigger: AGCCAGACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGCCCAGCTGCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CCA 72 bp GAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTaGGTGGCTTGCCGCCCACAGGTATTTGGTAACTTC +
Preference number: 3 (lower is better)
Translates to: EQLVSSVSCLGA*VACRPQVFGNF
Trigger: GAAGTTACCAAATACCTGTGGGCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CCA 72 bp GGCAGGCCTGCCGGATGTCAGGCCCTCCACAAGAGGTaGAAGAGCAGAGTCTTCTCTAAACTCCTCCAGGGA +
Preference number: 3 (lower is better)
Translates to: GRPAGCQALHKR*KSRVFSKLLQG
Trigger: TCCCTGGAGGAGTTTAGAGAAGACTCTGCTCTTCCACCTCTTGTGGAGGGCCTGACATCCGGCAGGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CAA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCACAACCTGCACTCATTTaGATTGCCTGGAACTCTGGA +
Preference number: 3 (lower is better)
Translates to: ARPRSPLVALSGHNRRLAQPALI*IAWNSG
Trigger: TCCAGAGTTCCAGGCAATCAAAATGAGTGCAGGTTG...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 72 bp TTTATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTaGCTCGGCGCCTGGGTGGCTTGCCGCCCACAGGTA +
Preference number: 3 (lower is better)
Translates to: FIILEQLVSSVS*LGAWVACRPQV
Trigger: TACCTGTGGGCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CAA 90 bp GCCCGGGAGACCACTACTACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCTCTTTTCAGATACTGTaGTGTCTGTCTCTCAGCTCA +
Preference number: 3 (lower is better)
Translates to: ARETTTTNARRPVVAPNVSFQIL*CLSLSS
Trigger: TGAGCTGAGAGACAGACACAACAGTATCTGAAAAGA...GACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CAA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTCTAGGTCCAATGCACTaGACCCAACTCACATGCGTG +
Preference number: 3 (lower is better)
Translates to: RAESSLNSSRERDTPFPGLGPMH*TQLTCV
Trigger: CACGCATGTGAGTTGGGTCAAGTGCATTGGACCTAG...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CCA 72 bp TGTTGTTCCTTGATACTTTTTGCTACTGCTAGACCATaGTCCACCTGGCAACGGGCGTCTTCCCAGACGCTG +
Preference number: 3 (lower is better)
Translates to: CCSLILFATARP*STWQRASSQTL
Trigger: CAGCGTCTGGGAAGACGCCCGTTGCCAGGTGGACCATGGTCTAGCAGTAGCAAAAAGTATCAAGGAACAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CAA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTCTAGGTCCAATGCACTaGACCCAACTCACATGCGTG +
Preference number: 3 (lower is better)
Translates to: HNRRLALLSSGHTYVPSALGPMH*TQLTCV
Trigger: CACGCATGTGAGTTGGGTCAAGTGCATTGGACCTAG...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CAA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTCAACCTGCACTCATTTaGATTGCCTGGAACTCTGGA +
Preference number: 3 (lower is better)
Translates to: HNRRLALLSSGHTYVPSAQPALI*IAWNSG
Trigger: TCCAGAGTTCCAGGCAATCAAAATGAGTGCAGGTTG...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CAA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTGGGCTTTTTCATCAGTaGCCTCTGTCTGGTAACAGT +
Preference number: 3 (lower is better)
Translates to: HNRRLALLSSGHTYVPSAGLFHQ*PLSGNS
Trigger: ACTGTTACCAGACAGAGGCAACTGATGAAAAAGCCC...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CAA 90 bp AATTTACTACTGCTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAATGCAGCGGCTCGATCTaGGCTCACTGCAGCCTCTAC +
Preference number: 3 (lower is better)
Translates to: NLLLLSRRQSQVYRMEHECSGSI*AHCSLY
Trigger: GTAGAGGCTGCAGTGAGCCAAGATCGAGCCGCTGCA...TTCATGTTCCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CAA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACGCCGCCCACAGGTATTaGGTAACTTCCCTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: SETGSGPECLAALLFIGYAAHRY*VTSLSL
Trigger: AAGAGAAAGGGAAGTTACCAAATACCTGTGGGCGGC...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CAA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACGTTCAGTTACAGTCTTaGTCTCATAACCGGAGAGTT +
Preference number: 3 (lower is better)
Translates to: SETGSGPECLAALLFIGYVQLQS*SHNRRV
Trigger: AACTCTCCGGTTATGAGACAAAGACTGTAACTGAAC...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 72 bp CTCACATCCTATCTTTCACAGGGCTTTTTCATCAGTTaGCTCTGTCTGGTAACAGTCACACCAGCTCCTGTT +
Preference number: 3 (lower is better)
Translates to: LTSYLSQGFFIS*LCLVTVTPAPV
Trigger: AACAGGAGCTGGTGTGACTGTTACCAGACAGAGGCAACTGATGAAAAAGCCCTGTGAAAGATAGGATGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CCA 72 bp ACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCTaGCTGCATTGTTATTTATTGGATACAAAGCAAAAG +
Preference number: 3 (lower is better)
Translates to: TNARRPVVAPNV*LHCYLLDTKQK
Trigger: CTTTTGCTTTGTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGAGCATTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 72 bp CAGATACTGTTGTGTCTGTCTCTCAGCTCAAGCTCATaGTCACCTCACATCCTATCTTTCACAGGGCTTTTT +
Preference number: 3 (lower is better)
Translates to: QILLCLSLSSSS*SPHILSFTGLF
Trigger: AAAAAGCCCTGTGAAAGATAGGATGTGAGGTGAGCATGAGCTTGAGCTGAGAGACAGACACAACAGTATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CAA 90 bp AATTTACTACTGCTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAATCCATTTACTTTGAGTaGTTCCAACTTAAGCTGCAT +
Preference number: 3 (lower is better)
Translates to: NLLLLSRRQSQVYRMEHESIYFE*FQLKLH
Trigger: ATGCAGCTTAAGTTGGAACAACTCAAAGTAAATGGA...TTCATGTTCCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 72 bp TATCAGAGACTTTTAGTACTTTCACTAATTTACTACTaGTATCTAGAAGGCAGAGCCAGGTGTACAGGATGG +
Preference number: 3 (lower is better)
Translates to: YQRLLVLSLIYY*YLEGRARCTGW
Trigger: CCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATTAGTGAAAGTACTAAAAGTCTCTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CAA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGTTCTTCCATCCCACTTaGTATCTTGCATTCACTTCA +
Preference number: 3 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKFFHPT*YLAFTS
Trigger: TGAAGTGAATGCAAGATACAAAGTGGGATGGAAGAA...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR-3UTR CAA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTGTTCAGTTACAGTCTTaGTCTCATAACCGGAGAGTT +
Preference number: 3 (lower is better)
Translates to: PSMFHICMERVCILFRYCVQLQS*SHNRRV
Trigger: AACTCTCCGGTTATGAGACAAAGACTGTAACTGAAC...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 72 bp AAAGTAGGTGGTCAGTTTCCATCCATGTTCCATATATaGATGGAAAGAGTATGTATTCTTTTCAGATACTGT +
Preference number: 3 (lower is better)
Translates to: KVGGQFPSMFHI*MERVCILFRYC
Trigger: ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGGAAACTGACCACCTACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR GCA 72 bp GGAGACAGAGAGAAAGACAGCTTATGCCATTACTTCTaGATATCAGAGACTTTTAGTACTTTCACTAATTTA +
Preference number: 3 (lower is better)
Translates to: GDREKDSLCHYF*ISETFSTFTNL
Trigger: TAAATTAGTGAAAGTACTAAAAGTCTCTGATATGCAGAAGTAATGGCATAAGCTGTCTTTCTCTCTGTCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCGCTCCCGCGGCTCCGTaGAGGCCCCCTCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGAAPAAP*RPPLGL
Trigger: CAACCCCAGAGGGGGCCTGCACGGAGCCGCGGGAGC...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCCCACCACGCCGGCCGTaGGCTTCTCCCACCGGCGCT +
Preference number: 4 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGAPPRRP*ASPTGA
Trigger: AGCGCCGGTGGGAGAAGCGCACGGCCGGCGTGGTGG...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCTCGTCCAGCCGGCTCTaGCGTGCCTGCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGASSSRL*RACRRS
Trigger: GGAGCGCCTGCAGGCACGGCAGAGCCGGCTGGACGA...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp TCTGCCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGGGCCCCCTCTGGGGTTaGCTCCACCACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SAPGCTTPGRAPPTPSARGPLWG*LHHLLG
Trigger: GCCCAGGAGGTGGTGGAGGCAACCCCAGAGGGGGCC...CCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCTGCGCTGCGCCTTGCTaGCCGGCTCGTCTTCGCTCA +
Preference number: 4 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGACAAPC*PARLRS
Trigger: TGAGCGAAGACGAGCCGGCCAGCAAGGCGCAGCGCA...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCAGGATGCACCACGCCTaGACGTGCTCCCCCGACTCC +
Preference number: 4 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGARMHHA*TCSPDS
Trigger: GGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCT...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp TCTGCCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTCTTGCCTCGGCGCCTaGGTGGCTTGCCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SAPGCTTPGRAPPTPSARSCLGA*VACRPQ
Trigger: CTGTGGGCGGCAAGCCACCCAGGCGCCGAGGCAAGA...CCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGGCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp TCTGCCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTTCTGCGCTGCGCCTTaGTGGCCGGCTCGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: SAPGCTTPGRAPPTPSARFCAAP*WPARLR
Trigger: GCGAAGACGAGCCGGCCAGCAAGGCGCAGCGCAGAA...CCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp TCTGCCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGCGAGTAGAGAGGCCATaGCGGAGACCCGGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: SAPGCTTPGRAPPTPSARRVERP*RRPGPF
Trigger: GAACGGCCCGGGTCTCCGCCATGGCCTCTCTACTCG...CCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp TCTGCCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGAGGATGCACCACGCCTaGACGTGCTCCCCCGACTCC +
Preference number: 4 (lower is better)
Translates to: SAPGCTTPGRAPPTPSARRMHHA*TCSPDS
Trigger: GGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCT...CCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp TCTGCCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGGTGCCCTTCCCTGCCTaGCAGCCGAGGCAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SAPGCTTPGRAPPTPSARVPFPA*QPRQRE
Trigger: CTCTCTCTGCCTCGGCTGCCAGGCAGGGAAGGGCAC...CCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCCTGGGATTGACAGCATaGGCCACCATGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGALGLTA*ATMPGP
Trigger: AGGGCCTGGCATGGTGGCTCATGCTGTCAATCCCAG...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GCCCGGGAGACCACTACTACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCCCACCACGCCGGCCGTaGGCTTCTCCCACCGGCGCT +
Preference number: 4 (lower is better)
Translates to: ARETTTTNARRPVVAPNVPPRRP*ASPTGA
Trigger: AGCGCCGGTGGGAGAAGCGCACGGCCGGCGTGGTGG...GACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTGCCGCCACCACGCCTGGACGTaGTCCCCCGACTCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LEQLVSSVSCLGAWVACRHHAWT*SPDSQC
Trigger: GCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTG...GCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCTGTGTCCCCCTCACATaGAGAGGCCGAGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGACVPLT*RGRGLW
Trigger: CCACAGACCTCGGCCTCTCCATGTGAGGGGGACACA...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCTTCCGGTCCCGTTCCTaGTTTCTCCGCCGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGAFRSRS*FLRRLF
Trigger: GAAAAGGCGGCGGAGAAAGCAGGAACGGGACCGGAA...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GCCCGGGAGACCACTACTACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCCACCGGCGCTGCCGCTaGGCCCTGCGCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ARETTTTNARRPVVAPNVHRRCR*ALRFSL
Trigger: CAAGGAGAAGCGCAGGGCGCAGCGGCAGCGCCGGTG...GACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp TCTGCCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGGGCCCCAGAGGCTGCTaGAGATTTCTCCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SAPGCTTPGRAPPTPSARGPRGC*RFLPQG
Trigger: TCCTTGGGGGAGAAATCTCCAGCAGCCTCTGGGGCC...CCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCGGTTCCCTGCTGAGCTaGAAGCCCAAGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGAGSLLS*KPKLLP
Trigger: AGGAAGCAGCTTGGGCTTCCAGCTCAGCAGGGAACC...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTGCCGCTGCGCTGCGCCTTGCTaGCCGGCTCGTCTTCGCTCA +
Preference number: 4 (lower is better)
Translates to: LEQLVSSVSCLGAWVACRCAAPC*PARLRS
Trigger: TGAGCGAAGACGAGCCGGCCAGCAAGGCGCAGCGCA...GCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTGCCGCGACGGCGGCCCCAGGTaGGAAAGACTCAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: LEQLVSSVSCLGAWVACRDGGPR*ERLRPG
Trigger: GCCTGGTCTGAGTCTTTCCCACCTGGGGCCGCCGTC...GCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp TCTGCCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGTGTCCCCCTCACATaGAGAGGCCGAGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SAPGCTTPGRAPPTPSARCVPLT*RGRGLW
Trigger: CCACAGACCTCGGCCTCTCCATGTGAGGGGGACACA...CCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp TCTGCCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGGCTGGAAGCCCAAGCTaGTTCCTCTTTGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SAPGCTTPGRAPPTPSARAGSPS*FLFGCL
Trigger: GAGGCAGCCAAAGAGGAAGCAGCTTGGGCTTCCAGC...CCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTAGGACGGAAGACGCAGCCGGCTCTGCCGTaGCTGCAGGCGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: EPASRTQRVSWSLLGRKTQPALP*LQALQQ
Trigger: CTGCTGGAGCGCCTGCAGGCACGGCAGAGCCGGCTG...CGTCTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTAGGACGGAAGACGTTCTCCCACCGGCGCTaGCGCTGCGCCCTGCGCTTC +
Preference number: 4 (lower is better)
Translates to: EPASRTQRVSWSLLGRKTFSHRR*RCALRF
Trigger: GAAGCGCAGGGCGCAGCGGCAGCGCCGGTGGGAGAA...CGTCTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GCCCGGGAGACCACTACTACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCGGTCCTGCGGCAGGATaGGGCCCTTCTTGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: ARETTTTNARRPVVAPNVGPAAG*GPSCGL
Trigger: GAGCCCGCAAGAAGGGCCGCATCCTGCCGCAGGACC...GACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTGCCGCCTGTCCCGTGGCTCCTaGGAACACAGGCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LEQLVSSVSCLGAWVACRLSRGS*EHRQWG
Trigger: TCCCCACTGCCTGTGTTCGCAGGAGCCACGGGACAG...GCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTGCCGCTCCCCCGACTCCCAGTaGCAGGTGCCCATATGCCAC +
Preference number: 4 (lower is better)
Translates to: LEQLVSSVSCLGAWVACRSPDSQ*QVPICH
Trigger: GTGGCATATGGGCACCTGGCACTGGGAGTCGGGGGA...GCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp GCCCGGGAGACCACTACTACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCCGTGCAGGCCCCCTCTaGGGTTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: ARETTTTNARRPVVAPNVRAGPL*GCLHHL
Trigger: GAGGTGGTGGAGGCAACCCCAGAGGGGGCCTGCACG...GACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp TCTGCCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGCTCACATGGGATCTGTaGTCTGGGCCCTCACAACTC +
Preference number: 4 (lower is better)
Translates to: SAPGCTTPGRAPPTPSARLTWDL*SGPSQL
Trigger: GAGTTGTGAGGGCCCAGATCACAGATCCCATGTGAG...CCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp CTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTGCCGCCTGGGATTGACAGCATaGGCCACCATGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LEQLVSSVSCLGAWVACRLGLTA*ATMPGP
Trigger: AGGGCCTGGCATGGTGGCTCATGCTGTCAATCCCAG...GCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTGCTCCCGCGGCTCCGTaGAGGCCCCCTCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: IILEQLVSSVSCLGAWVAAPAAP*RPPLGL
Trigger: CAACCCCAGAGGGGGCCTGCACGGAGCCGCGGGAGC...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCACGGTCCTGGCGCTGCTaGATCTTCTCCACCACGCCG +
Preference number: 4 (lower is better)
Translates to: ARPRSPLVALSGHNRRLARSWRC*IFSTTP
Trigger: CGGCGTGGTGGAGAAGATGCAGCAGCGCCAGGACCG...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp TCTGCCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTCGATCTTGGCTCACTaGAGCCTCTACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SAPGCTTPGRAPPTPSARSILAH*SLYLLG
Trigger: ACCCAGGAGGTAGAGGCTGCAGTGAGCCAAGATCGA...CCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTAGGACGGAAGACGCAGGGTGCCCTTCCCTaGCTGGCAGCCGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EPASRTQRVSWSLLGRKTQGALP*LAAEAE
Trigger: CTCTGCCTCGGCTGCCAGGCAGGGAAGGGCACCCTG...CGTCTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCATGGGATCTGTGATCTaGGCCCTCACAACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGAMGSVI*ALTTQQ
Trigger: CTGCTGAGTTGTGAGGGCCCAGATCACAGATCCCAT...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTGCCGCCAAGGAGCCCTCTGGTaGCCCTGTCCGGGCATAACA +
Preference number: 4 (lower is better)
Translates to: LEQLVSSVSCLGAWVACRQGALW*PCPGIT
Trigger: TGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTG...GCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCACCCTTTCCCTGGGTCTaGAGGTCCCGGATCCTGCGT +
Preference number: 4 (lower is better)
Translates to: ARPRSPLVALSGHNRRLAPFPWV*RSRILR
Trigger: ACGCAGGATCCGGGACCTTCAGACCCAGGGAAAGGG...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GCCCGGGAGACCACTACTACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCTCCCCCGACTCCCAGTaGCAGGTGCCCATATGCCAC +
Preference number: 4 (lower is better)
Translates to: ARETTTTNARRPVVAPNVSPDSQ*QVPICH
Trigger: GTGGCATATGGGCACCTGGCACTGGGAGTCGGGGGA...GACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCACGTTCTGCCCCAGGATaGACCACGCCTGGACGTGCT +
Preference number: 4 (lower is better)
Translates to: ARPRSPLVALSGHNRRLARSAPG*TTPGRA
Trigger: AGCACGTCCAGGCGTGGTGCATCCTGGGGCAGAACG...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GCCCGGGAGACCACTACTACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCTTCTCTTTTCTGCGCTaGGCCTTGCTGGCCGGCTCG +
Preference number: 4 (lower is better)
Translates to: ARETTTTNARRPVVAPNVFSFLR*ALLAGS
Trigger: CGAGCCGGCCAGCAAGGCGCAGCGCAGAAAAGAGAA...GACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTCAGGGTGCCCTTCCCTaGCTGGCAGCCGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: IILEQLVSSVSCLGAWVAQGALP*LAAEAE
Trigger: CTCTGCCTCGGCTGCCAGGCAGGGAAGGGCACCCTG...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AGATCCTGGGACAGAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTGTCCACTGGACAGGGTaGCCTTCCCTGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RSWDRASVKDSEGVLESPVHWTG*PSLPGS
Trigger: GCTGCCAGGCAGGGAAGGGCACCCTGTCCAGTGGAC...AGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTCTGTCCCAGGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCAGCAGGTAGGCGTCCTTaGCGAGTAGAGAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: ARPRSPLVALSGHNRRLAAGRRP*RVERPW
Trigger: CCATGGCCTCTCTACTCGCCAAGGACGCCTACCTGC...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCAAGAGGCCGAGGTCTGTaGAGATCCTGGGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: ARPRSPLVALSGHNRRLARGRGL*RSWDRA
Trigger: GGCTCTGTCCCAGGATCTCCACAGACCTCGGCCTCT...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp AGATCCTGGGACAGAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTAGCGGGGAGGAGCCATaGCGTTCTGCCCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: RSWDRASVKDSEGVLESPSGEEP*RSAPGC
Trigger: GCATCCTGGGGCAGAACGCCATGGCTCCTCCCCGCT...AGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTCTGTCCCAGGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp GCCCGGGAGACCACTACTACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCTCACCTCCACCTTATTaGAGATCAGCCCGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: ARETTTTNARRPVVAPNVSPPPY*RSARAA
Trigger: AGCCGCCCGGGCTGATCTTCAATAAGGTGGAGGTGA...GACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp AGATCCTGGGACAGAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTCCCTTTCCCTGGGTCTaGAGGTCCCGGATCCTGCGT +
Preference number: 4 (lower is better)
Translates to: RSWDRASVKDSEGVLESPPFPWV*RSRILR
Trigger: ACGCAGGATCCGGGACCTTCAGACCCAGGGAAAGGG...AGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTCTGTCCCAGGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCATTCCGGTCCCGTTCCTaGTTTCTCCGCCGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ARPRSPLVALSGHNRRLAFRSRS*FLRRLF
Trigger: GAAAAGGCGGCGGAGAAAGCAGGAACGGGACCGGAA...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTAGGACGGAAGACGGCCTCTTCTCTTTTCTaGGCTGCGCCTTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: EPASRTQRVSWSLLGRKTASSLF*AAPCWP
Trigger: CGGCCAGCAAGGCGCAGCGCAGAAAAGAGAAGAGGC...CGTCTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTTCGTCCAGCCGGCTCTaGCGTGCCTGCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RAESSLNSSRERDTPFPGSSSRL*RACRRS
Trigger: GGAGCGCCTGCAGGCACGGCAGAGCCGGCTGGACGA...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AGATCCTGGGACAGAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTGGAACAGGCAGTGACTaGCCACCCCCACCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RSWDRASVKDSEGVLESPGTGSD*PPPPFL
Trigger: GAGGAACGGTGGGGGTGGGCAGTCACTGCCTGTTCC...AGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTCTGTCCCAGGATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AGATCCTGGGACAGAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTCTGTCCCGTGGCTCCTaGGAACACAGGCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RSWDRASVKDSEGVLESPLSRGS*EHRQWG
Trigger: TCCCCACTGCCTGTGTTCGCAGGAGCCACGGGACAG...AGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTCTGTCCCAGGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GCCCGGGAGACCACTACTACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCACTCCCAGTGCCAGGTaGCCATATGCCACACCTCAG +
Preference number: 4 (lower is better)
Translates to: ARETTTTNARRPVVAPNVTPSAR*PYATPQ
Trigger: CTGAGGTGTGGCATATGGGCACCTGGCACTGGGAGT...GACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTGTCCACTGGACAGGGTaGCCTTCCCTGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: IILEQLVSSVSCLGAWVAVHWTG*PSLPGS
Trigger: GCTGCCAGGCAGGGAAGGGCACCCTGTCCAGTGGAC...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTCGAGTAGAGAGGCCATaGCGGAGACCCGGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: IILEQLVSSVSCLGAWVARVERP*RRPGPF
Trigger: GAACGGCCCGGGTCTCCGCCATGGCCTCTCTACTCG...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCATGTTCCGGGGCCGAATaGGAGCAGATCTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ARPRSPLVALSGHNRRLACSGAE*EQIFLA
Trigger: GGCCAAGAAGATCTGCTCCCATTCGGCCCCGGAACA...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp GAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTAGGACGGAAGACGCAAGGAGCCCTCTGGTaGCCCTGTCCGGGCATAACA +
Preference number: 4 (lower is better)
Translates to: EPASRTQRVSWSLLGRKTQGALW*PCPGIT
Trigger: TGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTG...CGTCTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCACTCACATGGGATCTGTaGTCTGGGCCCTCACAACTC +
Preference number: 4 (lower is better)
Translates to: ARPRSPLVALSGHNRRLALTWDL*SGPSQL
Trigger: GAGTTGTGAGGGCCCAGATCACAGATCCCATGTGAG...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACGCCCGCGTGCGCGCCTaGTGTTCCGGGGCCGAATGG +
Preference number: 4 (lower is better)
Translates to: SETGSGPECLAALLFIGYARVRA*CSGAEW
Trigger: CCATTCGGCCCCGGAACAGCAGGCGCGCACGCGGGC...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTTTTTGCCAGCCCGCGTaGGCGCCTGCTGTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: RAESSLNSSRERDTPFPGFCQPA*APAVPG
Trigger: CCCCGGAACAGCAGGCGCGCACGCGGGCTGGCAAAA...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AGATCCTGGGACAGAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTCCTGGCCCCAGAGGCTaGTGGAGATTTCTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: RSWDRASVKDSEGVLESPPGPRG*WRFLPQ
Trigger: TTGGGGGAGAAATCTCCAGCAGCCTCTGGGGCCAGG...AGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTCTGTCCCAGGATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTCACCGGCGCTGCCGCTaGGCCCTGCGCTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: HNRRLALLSSGHTYVPSAHRRCR*ALRFSL
Trigger: CAAGGAGAAGCGCAGGGCGCAGCGGCAGCGCCGGTG...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTTTCCTGCGCAGGTTCTaGCGCCGCCGGTCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: HNRRLALLSSGHTYVPSAFLRRF*RRRSWR
Trigger: GCGCCAGGACCGGCGGCGGCAGAACCTGCGCAGGAA...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTGACTCAGACCAGGCCTaGGCGCTCCAGGTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: RAESSLNSSRERDTPFPGDSDQA*ALQVLR
Trigger: CCGCAGGACCTGGAGCGCGCAGGCCTGGTCTGAGTC...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp AGATCCTGGGACAGAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTCAGACTCAGGCTCAGTaGCCAGGCCATCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RSWDRASVKDSEGVLESPQTQAQ*PGHLQG
Trigger: ACCCTGCAGATGGCCTGGCCACTGAGCCTGAGTCTG...AGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTCTGTCCCAGGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTCCTGGCCCCAGAGGCTaGTGGAGATTTCTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: IILEQLVSSVSCLGAWVAPGPRG*WRFLPQ
Trigger: TTGGGGGAGAAATCTCCAGCAGCCTCTGGGGCCAGG...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACGGCCCCCTCTGGGGTTaGCTCCACCACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SETGSGPECLAALLFIGYGPLWG*LHHLLG
Trigger: GCCCAGGAGGTGGTGGAGGCAACCCCAGAGGGGGCC...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTGCCTCTTCTCTTTTCTaGGCTGCGCCTTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: IILEQLVSSVSCLGAWVAASSLF*AAPCWP
Trigger: CGGCCAGCAAGGCGCAGCGCAGAAAAGAGAAGAGGC...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACCGGCTCTGCCGTGCCTaGAGGCGCTCCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SETGSGPECLAALLFIGYRLCRA*RRSSSC
Trigger: GCAGCTGCTGGAGCGCCTGCAGGCACGGCAGAGCCG...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTGGAGCCATGGCGTTCTaGCCCAGGATGCACCACGCC +
Preference number: 4 (lower is better)
Translates to: RAESSLNSSRERDTPFPGGAMAF*PRMHHA
Trigger: GGCGTGGTGCATCCTGGGGCAGAACGCCATGGCTCC...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GCCCGGGAGACCACTACTACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCACTCCGGGAAGGTACTaGTCCCTCCCTCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: ARETTTTNARRPVVAPNVTPGRY*SLPPNS
Trigger: AGAATTTGGAGGGAGGGAGCAGTACCTTCCCGGAGT...GACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTGCAGGTAGGCGTCCTTaGCGAGTAGAGAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: IILEQLVSSVSCLGAWVAAGRRP*RVERPW
Trigger: CCATGGCCTCTCTACTCGCCAAGGACGCCTACCTGC...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp TCTGCCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTCTGGACAAAGTAGGTaGTCAGTTTCCATCCATGTT +
Preference number: 4 (lower is better)
Translates to: SAPGCTTPGRAPPTPSARSGQSR*SVSIHV
Trigger: AACATGGATGGAAACTGACCACCTACTTTGTCCAGA...CCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp GAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTAGGACGGAAGACGAGCCTCCCAAGCAGCTaGGACTACAGGTTTGCACCA +
Preference number: 4 (lower is better)
Translates to: EPASRTQRVSWSLLGRKTSLPSS*DYRFAP
Trigger: TGGTGCAAACCTGTAGTCCCAGCTGCTTGGGAGGCT...CGTCTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTACCGTTCCTCCTCCCTaGCCCTGCAAACCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: RAESSLNSSRERDTPFPGTVPPP*PCKPRG
Trigger: TCCCCGAGGTTTGCAGGGTCAGGGAGGAGGAACGGT...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GTAACAGTCACACCAGCTCCTGTTCAGTTACAGTCTTTGTCTCATAACCGGAGAGCCCGCGTGCGCGCCTaGTGTTCCGGGGCCGAATGG +
Preference number: 4 (lower is better)
Translates to: VTVTPAPVQLQSLSHNRRARVRA*CSGAEW
Trigger: CCATTCGGCCCCGGAACAGCAGGCGCGCACGCGGGC...TCTCCGGTTATGAGACAAAGACTGTAACTGAACAGGAGCTGGTGTGACTGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AGATCCTGGGACAGAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTCAGCATGAGCCACCATaGCAGGCCCTGTTCCACAAA +
Preference number: 4 (lower is better)
Translates to: RSWDRASVKDSEGVLESPQHEPP*QALFHK
Trigger: TTTGTGGAACAGGGCCTGGCATGGTGGCTCATGCTG...AGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTCTGTCCCAGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTGACGGCGGCCCCAGGTaGGAAAGACTCAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: HNRRLALLSSGHTYVPSADGGPR*ERLRPG
Trigger: GCCTGGTCTGAGTCTTTCCCACCTGGGGCCGCCGTC...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp GAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTAGGACGGAAGACGGCCCTCCACAAGAGGTaGAAGAGCAGAGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EPASRTQRVSWSLLGRKTALHKR*KSRVFS
Trigger: AGAGAAGACTCTGCTCTTCCACCTCTTGTGGAGGGC...CGTCTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTGCCCCACAGGGTCCGTaGGTCTCTCCCTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: HNRRLALLSSGHTYVPSAAPQGP*VSPSLC
Trigger: ACACAGGGAGGGAGAGACCCACGGACCCTGTGGGGC...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CAA 72 bp GTGGCCCTGTCCGGGCATAACAGAAGGCTCGCACTCTaGTCTTCTGGTCACACCTATGTCCCCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VALSGHNRRLAL*SSGHTYVPSAP
Trigger: AGGAGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATGCCCGGACAGGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTCTGAGCCTTGAGTTTTaGCAGCCCGCGTGCGCGCCT +
Preference number: 4 (lower is better)
Translates to: HNRRLALLSSGHTYVPSALSLEF*QPACAP
Trigger: AGGCGCGCACGCGGGCTGGCAAAACTCAAGGCTCAG...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GTAACAGTCACACCAGCTCCTGTTCAGTTACAGTCTTTGTCTCATAACCGGAGACGGCTCTGCCGTGCCTaGAGGCGCTCCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VTVTPAPVQLQSLSHNRRRLCRA*RRSSSC
Trigger: GCAGCTGCTGGAGCGCCTGCAGGCACGGCAGAGCCG...TCTCCGGTTATGAGACAAAGACTGTAACTGAACAGGAGCTGGTGTGACTGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GTAACAGTCACACCAGCTCCTGTTCAGTTACAGTCTTTGTCTCATAACCGGAGAGCGCGCTCCAGGTCCTaGGGCAGGATGCGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: VTVTPAPVQLQSLSHNRRARSRS*GRMRPF
Trigger: GAAGGGCCGCATCCTGCCGCAGGACCTGGAGCGCGC...TCTCCGGTTATGAGACAAAGACTGTAACTGAACAGGAGCTGGTGTGACTGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTCGTTCTGCCCCAGGATaGACCACGCCTGGACGTGCT +
Preference number: 4 (lower is better)
Translates to: HNRRLALLSSGHTYVPSARSAPG*TTPGRA
Trigger: AGCACGTCCAGGCGTGGTGCATCCTGGGGCAGAACG...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTCGATCTTGGCTCACTaGAGCCTCTACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: IILEQLVSSVSCLGAWVASILAH*SLYLLG
Trigger: ACCCAGGAGGTAGAGGCTGCAGTGAGCCAAGATCGA...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTTCACCCAGGCTGGAGTaGAGCGGCTCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RAESSLNSSRERDTPFPGSPRLE*SGSILA
Trigger: AGCCAAGATCGAGCCGCTGCACTCCAGCCTGGGTGA...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTCAGACTCAGGCTCAGTaGCCAGGCCATCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RAESSLNSSRERDTPFPGQTQAQ*PGHLQG
Trigger: ACCCTGCAGATGGCCTGGCCACTGAGCCTGAGTCTG...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCGAATTTGTCTACGTCTaGAATTACCTGTTCTCTATA +
Preference number: 4 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGAEFVYV*NYLFSI
Trigger: TATAGAGAACAGGTAATTCCAGACGTAGACAAATTC...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTGCCTATATTTTATTATACTaGAACAGCTCGTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PQDAPRLDVLPRLPVPGAYILLY*NSSCPL
Trigger: CAGAGGACACGAGCTGTTCCAGTATAATAAAATATA...GGCACCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp AGATCCTGGGACAGAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTCGCACTCTTGTCTTCTaGTCACACCTATGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RSWDRASVKDSEGVLESPRTLVF*SHLCPL
Trigger: GAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCG...AGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTCTGTCCCAGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp GAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTAGGACGGAAGACGATAGGTAAGGTCACGTaGATCACGTGTCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: EPASRTQRVSWSLLGRKTIGKVT*ITCPLD
Trigger: GTCCAGTGGACACGTGATCCACGTGACCTTACCTAT...CGTCTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CAA 72 bp TTTTATTATACTGGAACAGCTCGTGTCCTCTGTCTCTaGCCTCGGCGCCTGGGTGGCTTGCCGCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: FYYTGTARVLCL*PRRLGGLPPTG
Trigger: ACCTGTGGGCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAATAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTGGCGGACTAGGAGCGTaGCCACTGAAGCACAGCATC +
Preference number: 4 (lower is better)
Translates to: HNRRLALLSSGHTYVPSAGGLGA*PLKHSI
Trigger: GATGCTGTGCTTCAGTGGTCACGCTCCTAGTCCGCC...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTGCTGGAAGCCCAAGCTaGTTCCTCTTTGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RAESSLNSSRERDTPFPGAGSPS*FLFGCL
Trigger: GAGGCAGCCAAAGAGGAAGCAGCTTGGGCTTCCAGC...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTTTCTCTTTTCTGCGCTaGGCCTTGCTGGCCGGCTCG +
Preference number: 4 (lower is better)
Translates to: HNRRLALLSSGHTYVPSAFSFLR*ALLAGS
Trigger: CGAGCCGGCCAGCAAGGCGCAGCGCAGAAAAGAGAA...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTGCCGCTCCCACTTTGTATCTTaGATTCACTTCACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LEQLVSSVSCLGAWVACRSHFVS*IHFTLS
Trigger: AGAGAGAGTGAAGTGAATGCAAGATACAAAGTGGGA...GCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTAGGACGGAAGACGCTCAGCTCAAGCTCATaGTCACCTCACATCCTATCT +
Preference number: 4 (lower is better)
Translates to: EPASRTQRVSWSLLGRKTLSSSS*SPHILS
Trigger: AGATAGGATGTGAGGTGAGCATGAGCTTGAGCTGAG...CGTCTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTAGAGGCCGAGGTCTGTaGAGATCCTGGGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: HNRRLALLSSGHTYVPSARGRGL*RSWDRA
Trigger: GGCTCTGTCCCAGGATCTCCACAGACCTCGGCCTCT...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp GTAACAGTCACACCAGCTCCTGTTCAGTTACAGTCTTTGTCTCATAACCGGAGATCTTGCCTCGGCGCCTaGGTGGCTTGCCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: VTVTPAPVQLQSLSHNRRSCLGA*VACRPQ
Trigger: CTGTGGGCGGCAAGCCACCCAGGCGCCGAGGCAAGA...TCTCCGGTTATGAGACAAAGACTGTAACTGAACAGGAGCTGGTGTGACTGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTGGATCACGTGTCCACTaGACAGGGTGCCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: HNRRLALLSSGHTYVPSAGSRVH*TGCPSL
Trigger: CAGGGAAGGGCACCCTGTCCAGTGGACACGTGATCC...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GTAACAGTCACACCAGCTCCTGTTCAGTTACAGTCTTTGTCTCATAACCGGAGAGCTGCCGCTGCGCCCTaGGCTTCTCCTTGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: VTVTPAPVQLQSLSHNRRAAAAP*ASPCAS
Trigger: TGAAGCGCAAGGAGAAGCGCAGGGCGCAGCGGCAGC...TCTCCGGTTATGAGACAAAGACTGTAACTGAACAGGAGCTGGTGTGACTGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTACTCCCAGTGCCAGGTaGCCATATGCCACACCTCAG +
Preference number: 4 (lower is better)
Translates to: HNRRLALLSSGHTYVPSATPSAR*PYATPQ
Trigger: CTGAGGTGTGGCATATGGGCACCTGGCACTGGGAGT...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTGGTTCCCTGCTGAGCTaGAAGCCCAAGCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: HNRRLALLSSGHTYVPSAGSLLS*KPKLLP
Trigger: AGGAAGCAGCTTGGGCTTCCAGCTCAGCAGGGAACC...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCACCCCGAATGTCTGGCTaGATTGTTATTTATTGGATA +
Preference number: 4 (lower is better)
Translates to: ARPRSPLVALSGHNRRLAPRMSG*IVIYWI
Trigger: TATCCAATAAATAACAATGCAGCCAGACATTCGGGG...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp AATTTACTACTGCTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAACGTGCAGGCCCCCTCTaGGGTTGCCTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: NLLLLSRRQSQVYRMEHERAGPL*GCLHHL
Trigger: GAGGTGGTGGAGGCAACCCCAGAGGGGGCCTGCACG...TTCATGTTCCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTATGGGATCTGTGATCTaGGCCCTCACAACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RAESSLNSSRERDTPFPGMGSVI*ALTTQQ
Trigger: CTGCTGAGTTGTGAGGGCCCAGATCACAGATCCCAT...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp AATTTACTACTGCTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAAGTGGGGAACAGGCAGTaGCTGCCCACCCCCACCGTT +
Preference number: 4 (lower is better)
Translates to: NLLLLSRRQSQVYRMEHEVGNRQ*LPTPTV
Trigger: AACGGTGGGGGTGGGCAGTCACTGCCTGTTCCCCAC...TTCATGTTCCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp GTAACAGTCACACCAGCTCCTGTTCAGTTACAGTCTTTGTCTCATAACCGGAGAGGCGGACTAGGAGCGTaGCCACTGAAGCACAGCATC +
Preference number: 4 (lower is better)
Translates to: VTVTPAPVQLQSLSHNRRGGLGA*PLKHSI
Trigger: GATGCTGTGCTTCAGTGGTCACGCTCCTAGTCCGCC...TCTCCGGTTATGAGACAAAGACTGTAACTGAACAGGAGCTGGTGTGACTGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACCAGCATGAGCCACCATaGCAGGCCCTGTTCCACAAA +
Preference number: 4 (lower is better)
Translates to: SETGSGPECLAALLFIGYQHEPP*QALFHK
Trigger: TTTGTGGAACAGGGCCTGGCATGGTGGCTCATGCTG...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp AATTTACTACTGCTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAAGCCCCACAGGGTCCGTaGGTCTCTCCCTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: NLLLLSRRQSQVYRMEHEAPQGP*VSPSLC
Trigger: ACACAGGGAGGGAGAGACCCACGGACCCTGTGGGGC...TTCATGTTCCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp CCTAGTTTTGGTATCAAAGCTAAGTTCACGAATGAAGTGTTCTCTCAATTGATTCCTTCTTGCGGGCTCTaGGCAGGCGGCGCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: PSFGIKAKFTNEVFSQLIPSCGL*AGGARR
Trigger: GCGCCGAGCGCCGCCTGCTCAGAGCCCGCAAGAAGG...AATCAATTGAGAGAACACTTCATTCGTGAACTTAGCTTTGATACCAAAACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp GAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTAGGACGGAAGACGACTCAATTTCATCAGTaGTTACAACTCAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: EPASRTQRVSWSLLGRKTTQFHQ*LQLRLS
Trigger: AGAAAGCCTGAGTTGTAATCACTGATGAAATTGAGT...CGTCTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGCAGCCGGCTCTGCCGTaGCTGCAGGCGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKQPALP*LQALQQ
Trigger: CTGCTGGAGCGCCTGCAGGCACGGCAGAGCCGGCTG...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGTTCCTGCGCAGGTTCTaGCGCCGCCGGTCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKFLRRF*RRRSWR
Trigger: GCGCCAGGACCGGCGGCGGCAGAACCTGCGCAGGAA...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AGATCCTGGGACAGAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTTCACTAATTTACTACTaGTATCTAGAAGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RSWDRASVKDSEGVLESPSLIYY*YLEGRA
Trigger: GGCTCTGCCTTCTAGATAGCAGTAGTAAATTAGTGA...AGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTCTGTCCCAGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp TTGTTTTATATTTTATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGTGCCGCCGCCGGTCCTaGCGCTGCTGCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LFYILLYWNSSCPLSLASCRRRS*RCCIFS
Trigger: GGAGAAGATGCAGCAGCGCCAGGACCGGCGGCGGCA...CGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAATAAAATATAAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCATGCATTGTTATTTATTaGATACAAAGCAAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: ARPRSPLVALSGHNRRLACIVIY*IQSKRG
Trigger: GCCCCTTTTGCTTTGTATCCAATAAATAACAATGCA...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTTTCTCCCACCGGCGCTaGCGCTGCGCCCTGCGCTTC +
Preference number: 4 (lower is better)
Translates to: PSMFHICMERVCILFRYCFSHRR*RCALRF
Trigger: GAAGCGCAGGGCGCAGCGGCAGCGCCGGTGGGAGAA...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp ATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGACTTCTGGTCCTGCGGCAGGATaGGGCCCTTCTTGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: IGIRSDNDTDSLKYLKTSGPAAG*GPSCGL
Trigger: GAGCCCGCAAGAAGGGCCGCATCCTGCCGCAGGACC...AGAAGTCTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CCTAGTTTTGGTATCAAAGCTAAGTTCACGAATGAAGTGTTCTCTCAATTGATTGCGCGCTCCAGGTCCTaGGGCAGGATGCGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PSFGIKAKFTNEVFSQLIARSRS*GRMRPF
Trigger: GAAGGGCCGCATCCTGCCGCAGGACCTGGAGCGCGC...AATCAATTGAGAGAACACTTCATTCGTGAACTTAGCTTTGATACCAAAACTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp ATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGACTTCTCACCACGCCTGGACGTaGTCCCCCGACTCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: IGIRSDNDTDSLKYLKTSHHAWT*SPDSQC
Trigger: GCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTG...AGAAGTCTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp ATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGACTTCTTGCCGCCGCCGGTCCTaGCGCTGCTGCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IGIRSDNDTDSLKYLKTSCRRRS*RCCIFS
Trigger: GGAGAAGATGCAGCAGCGCCAGGACCGGCGGCGGCA...AGAAGTCTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp GTAACAGTCACACCAGCTCCTGTTCAGTTACAGTCTTTGTCTCATAACCGGAGAACTCAGAGGGTGTCCTaGAGTCTCCTAGGACGGAAG +
Preference number: 4 (lower is better)
Translates to: VTVTPAPVQLQSLSHNRRTQRVS*SLLGRK
Trigger: CTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGT...TCTCCGGTTATGAGACAAAGACTGTAACTGAACAGGAGCTGGTGTGACTGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGTCCCGGTCAGCGGCGTaGGGTTCCCCTTCACCCTCT +
Preference number: 4 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKSRSAA*GSPSPS
Trigger: AGAGGGTGAAGGGGAACCTCACGCCGCTGACCGGGA...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp ATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGACTTCTTCCCGGTCAGCGGCGTaGGGTTCCCCTTCACCCTCT +
Preference number: 4 (lower is better)
Translates to: IGIRSDNDTDSLKYLKTSSRSAA*GSPSPS
Trigger: AGAGGGTGAAGGGGAACCTCACGCCGCTGACCGGGA...AGAAGTCTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTTTTTGCCAGCCCGCGTaGGCGCCTGCTGTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PSMFHICMERVCILFRYCFCQPA*APAVPG
Trigger: CCCCGGAACAGCAGGCGCGCACGCGGGCTGGCAAAA...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGGCTGCCGCTGCGCCCTaGGCTTCTCCTTGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKAAAAP*ASPCAS
Trigger: TGAAGCGCAAGGAGAAGCGCAGGGCGCAGCGGCAGC...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGCGGTCCTGGCGCTGCTaGATCTTCTCCACCACGCCG +
Preference number: 4 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKRSWRC*IFSTTP
Trigger: CGGCGTGGTGGAGAAGATGCAGCAGCGCCAGGACCG...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTGACTCAGACCAGGCCTaGGCGCTCCAGGTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: PSMFHICMERVCILFRYCDSDQA*ALQVLR
Trigger: CCGCAGGACCTGGAGCGCGCAGGCCTGGTCTGAGTC...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp GTAACAGTCACACCAGCTCCTGTTCAGTTACAGTCTTTGTCTCATAACCGGAGAACTCCGGGAAGGTACTaGTCCCTCCCTCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: VTVTPAPVQLQSLSHNRRTPGRY*SLPPNS
Trigger: AGAATTTGGAGGGAGGGAGCAGTACCTTCCCGGAGT...TCTCCGGTTATGAGACAAAGACTGTAACTGAACAGGAGCTGGTGTGACTGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGAGCTGCGGACTAACGTaGCCCGGCAGCAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKSCGLT*PGSRGH
Trigger: GTGGCCTCTGCTGCCGGGCCACGTTAGTCCGCAGCT...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CAA 72 bp CCTCACATCCTATCTTTCACAGGGCTTTTTCATCAGTaGCCTCTGTCTGGTAACAGTCACACCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PHILSFTGLFHQ*PLSGNSHTSSC
Trigger: ACAGGAGCTGGTGTGACTGTTACCAGACAGAGGCAACTGATGAAAAAGCCCTGTGAAAGATAGGATGTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACAACCTGCACTCATTTTaGTTGCCTGGAACTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SETGSGPECLAALLFIGYNLHSF*LPGTLD
Trigger: ATCCAGAGTTCCAGGCAATCAAAATGAGTGCAGGTT...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CCTAGTTTTGGTATCAAAGCTAAGTTCACGAATGAAGTGTTCTCTCAATTGATTTTCTGCGCTGCGCCTTaGTGGCCGGCTCGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: PSFGIKAKFTNEVFSQLIFCAAP*WPARLR
Trigger: GCGAAGACGAGCCGGCCAGCAAGGCGCAGCGCAGAA...AATCAATTGAGAGAACACTTCATTCGTGAACTTAGCTTTGATACCAAAACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp ATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGACTTCTGGAACAGGCAGTGACTaGCCACCCCCACCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: IGIRSDNDTDSLKYLKTSGTGSD*PPPPFL
Trigger: GAGGAACGGTGGGGGTGGGCAGTCACTGCCTGTTCC...AGAAGTCTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CCTAGTTTTGGTATCAAAGCTAAGTTCACGAATGAAGTGTTCTCTCAATTGATTGGAGCCATGGCGTTCTaGCCCAGGATGCACCACGCC +
Preference number: 4 (lower is better)
Translates to: PSFGIKAKFTNEVFSQLIGAMAF*PRMHHA
Trigger: GGCGTGGTGCATCCTGGGGCAGAACGCCATGGCTCC...AATCAATTGAGAGAACACTTCATTCGTGAACTTAGCTTTGATACCAAAACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AGAGCAGAGTCTTCTCTAAACTCCTCCAGGGAAAGGGACACTCCCTTTCCCGGTTCACTAATTTACTACTaGTATCTAGAAGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RAESSLNSSRERDTPFPGSLIYY*YLEGRA
Trigger: GGCTCTGCCTTCTAGATAGCAGTAGTAAATTAGTGA...ACCGGGAAAGGGAGTGTCCCTTTCCCTGGAGGAGTTTAGAGAAGACTCTGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp CCTAGTTTTGGTATCAAAGCTAAGTTCACGAATGAAGTGTTCTCTCAATTGATTACCGTTCCTCCTCCCTaGCCCTGCAAACCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: PSFGIKAKFTNEVFSQLITVPPP*PCKPRG
Trigger: TCCCCGAGGTTTGCAGGGTCAGGGAGGAGGAACGGT...AATCAATTGAGAGAACACTTCATTCGTGAACTTAGCTTTGATACCAAAACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTTCCCACTTTGTATCTTaGATTCACTTCACTCTCTCT +
Preference number: 4 (lower is better)
Translates to: HNRRLALLSSGHTYVPSASHFVS*IHFTLS
Trigger: AGAGAGAGTGAAGTGAATGCAAGATACAAAGTGGGA...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp TTGTTTTATATTTTATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGTCTCCCCCAAGGACTTaGCCTTGTGCTCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LFYILLYWNSSCPLSLASSPPRT*PCAQQP
Trigger: AGGCTGCTGAGCACAAGGCCAAGTCCTTGGGGGAGA...CGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAATAAAATATAAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGGGCCCCAGAGGCTGCTaGAGATTTCTCCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKGPRGC*RFLPQG
Trigger: TCCTTGGGGGAGAAATCTCCAGCAGCCTCTGGGGCC...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGAGACCATGGTCCACCTaGCAACGGGCGTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKRPWST*QRASSQ
Trigger: CTGGGAAGACGCCCGTTGCCAGGTGGACCATGGTCT...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp ATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGACTTCTTCACCTCCACCTTATTaGAGATCAGCCCGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: IGIRSDNDTDSLKYLKTSSPPPY*RSARAA
Trigger: AGCCGCCCGGGCTGATCTTCAATAAGGTGGAGGTGA...AGAAGTCTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTTCACCCAGGCTGGAGTaGAGCGGCTCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PSMFHICMERVCILFRYCSPRLE*SGSILA
Trigger: AGCCAAGATCGAGCCGCTGCACTCCAGCCTGGGTGA...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACCCCCGAATGTCTGGCTaGATTGTTATTTATTGGATA +
Preference number: 4 (lower is better)
Translates to: SETGSGPECLAALLFIGYPRMSG*IVIYWI
Trigger: TATCCAATAAATAACAATGCAGCCAGACATTCGGGG...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp ATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGACTTCTTCTCCCCCAAGGACTTaGCCTTGTGCTCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: IGIRSDNDTDSLKYLKTSSPPRT*PCAQQP
Trigger: AGGCTGCTGAGCACAAGGCCAAGTCCTTGGGGGAGA...AGAAGTCTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CCTAGTTTTGGTATCAAAGCTAAGTTCACGAATGAAGTGTTCTCTCAATTGATTAGACCATGGTCCACCTaGCAACGGGCGTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PSFGIKAKFTNEVFSQLIRPWST*QRASSQ
Trigger: CTGGGAAGACGCCCGTTGCCAGGTGGACCATGGTCT...AATCAATTGAGAGAACACTTCATTCGTGAACTTAGCTTTGATACCAAAACTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTGGATCACGTGTCCACTaGACAGGGTGCCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PSMFHICMERVCILFRYCGSRVH*TGCPSL
Trigger: CAGGGAAGGGCACCCTGTCCAGTGGACACGTGATCC...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGCCTCCCTCCAAATTCTaGGCAGTAAAATGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKPPSKF*AVKCRP
Trigger: GGGGCGGCATTTTACTGCTCAGAATTTGGAGGGAGG...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGAGCCTCCCAAGCAGCTaGGACTACAGGTTTGCACCA +
Preference number: 4 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKSLPSS*DYRFAP
Trigger: TGGTGCAAACCTGTAGTCCCAGCTGCTTGGGAGGCT...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTACTCAGAGGGTGTCCTaGAGTCTCCTAGGACGGAAG +
Preference number: 4 (lower is better)
Translates to: PSMFHICMERVCILFRYCTQRVS*SLLGRK
Trigger: CTTCCGTCCTAGGAGACTCCAGGACACCCTCTGAGT...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACTATATTTTATTATACTaGAACAGCTCGTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SETGSGPECLAALLFIGYYILLY*NSSCPL
Trigger: CAGAGGACACGAGCTGTTCCAGTATAATAAAATATA...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp ATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGACTTCTGCCCTCCACAAGAGGTaGAAGAGCAGAGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: IGIRSDNDTDSLKYLKTSALHKR*KSRVFS
Trigger: AGAGAAGACTCTGCTCTTCCACCTCTTGTGGAGGGC...AGAAGTCTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp GTAACAGTCACACCAGCTCCTGTTCAGTTACAGTCTTTGTCTCATAACCGGAGAACTCAATTTCATCAGTaGTTACAACTCAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: VTVTPAPVQLQSLSHNRRTQFHQ*LQLRLS
Trigger: AGAAAGCCTGAGTTGTAATCACTGATGAAATTGAGT...TCTCCGGTTATGAGACAAAGACTGTAACTGAACAGGAGCTGGTGTGACTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTCGCACTCTTGTCTTCTaGTCACACCTATGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PSMFHICMERVCILFRYCRTLVF*SHLCPL
Trigger: GAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCG...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR GCA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGCTCAGCTCAAGCTCATaGTCACCTCACATCCTATCT +
Preference number: 4 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKLSSSS*SPHILS
Trigger: AGATAGGATGTGAGGTGAGCATGAGCTTGAGCTGAG...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp CCTAGTTTTGGTATCAAAGCTAAGTTCACGAATGAAGTGTTCTCTCAATTGATTATAGGTAAGGTCACGTaGATCACGTGTCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: PSFGIKAKFTNEVFSQLIIGKVT*ITCPLD
Trigger: GTCCAGTGGACACGTGATCCACGTGACCTTACCTAT...AATCAATTGAGAGAACACTTCATTCGTGAACTTAGCTTTGATACCAAAACTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CCA 90 bp GTAACAGTCACACCAGCTCCTGTTCAGTTACAGTCTTTGTCTCATAACCGGAGATGCATTGTTATTTATTaGATACAAAGCAAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: VTVTPAPVQLQSLSHNRRCIVIY*IQSKRG
Trigger: GCCCCTTTTGCTTTGTATCCAATAAATAACAATGCA...TCTCCGGTTATGAGACAAAGACTGTAACTGAACAGGAGCTGGTGTGACTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR TCA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTAACCTGCACTCATTTTaGTTGCCTGGAACTCTGGAT +
Preference number: 4 (lower is better)
Translates to: PSMFHICMERVCILFRYCNLHSF*LPGTLD
Trigger: ATCCAGAGTTCCAGGCAATCAAAATGAGTGCAGGTT...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CAA 72 bp CAGGTATTTGGTAACTTCCCTTTCTCTTACCTAGTTTaGGTATCAAAGCTAAGTTCACGAATGAAGTGTTCT +
Preference number: 4 (lower is better)
Translates to: QVFGNFPFSYLV*VSKLSSRMKCS
Trigger: AGAACACTTCATTCGTGAACTTAGCTTTGATACCAAAACTAGGTAAGAGAAAGGGAAGTTACCAAATACCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
3UTR CAA 72 bp ATCAAAGCTAAGTTCACGAATGAAGTGTTCTCTCAATaGATTCTGTTAGAATTTGTCTACGTCTGGAATTAC +
Preference number: 4 (lower is better)
Translates to: IKAKFTNEVFSQ*ILLEFVYVWNY
Trigger: GTAATTCCAGACGTAGACAAATTCTAACAGAATCAATTGAGAGAACACTTCATTCGTGAACTTAGCTTTGAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS CCA 90 bp GAGGGTGTCCTGGAGTCTCCTAGGACGGAAGACGGCGGCCCCAGGTaGGAAAGACTCAGACCAGGCCTGCGCGCTCCAGGTCCTGCGGCA +
Preference number: 5 (lower is better)
Translates to: EGVLESPRTEDGGPR*ERLRPGLRAPGPAA
Trigger: TGCCGCAGGACCTGGAGCGCGCAGGCCTGGTCTGAGTCTTTCCCACCTGGGGCCGCCGTCTTCCGTCCTAGGAGACTCCAGGACACCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372022.6
ENST00000468290.1
ENST00000628950.1
ENST00000629980.2
CDS-3UTR CAA 90 bp CTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTGCCGCCGGCGCCTGGGTGGCTaGCCGCCCACAGGTATTTGG +
Preference number: 5 (lower is better)
Translates to: LEQLVSSVSCLGAWVACRRRLGG*PPTGIW
Trigger: CCAAATACCTGTGGGCGGCAAGCCACCCAGGCGCCG...GCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp CTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTGCCGCCGTGTCCTCTGTCTCTaGCCTCGGCGCCTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: LEQLVSSVSCLGAWVACRRVLCL*PRRLGG
Trigger: GCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACG...GCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp GCCCGGGAGACCACTACTACCAATGCTCGGAGACCGGTAGTGGCCCCGAATGTCAGGATGCGGCCCTTCTaGCGGGCTCTGAGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: ARETTTTNARRPVVAPNVRMRPF*RALSRR
Trigger: CCGCCTGCTCAGAGCCCGCAAGAAGGGCCGCATCCT...GACATTCGGGGCCACTACCGGTCTCCGAGCATTGGTAGTAGTGGTCTCCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCACGGCGCCTGGGTGGCTaGCCGCCCACAGGTATTTGG +
Preference number: 5 (lower is better)
Translates to: ARPRSPLVALSGHNRRLARRLGG*PPTGIW
Trigger: CCAAATACCTGTGGGCGGCAAGCCACCCAGGCGCCG...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCACGTGTCCTCTGTCTCTaGCCTCGGCGCCTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: ARPRSPLVALSGHNRRLARVLCL*PRRLGG
Trigger: GCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACG...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp AGATCCTGGGACAGAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTTGCAGCGGCTCGATCTaGGCTCACTGCAGCCTCTAC +
Preference number: 5 (lower is better)
Translates to: RSWDRASVKDSEGVLESPCSGSI*AHCSLY
Trigger: GTAGAGGCTGCAGTGAGCCAAGATCGAGCCGCTGCA...AGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTCTGTCCCAGGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp CTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTGCCGCGCCGCCCACAGGTATTaGGTAACTTCCCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: LEQLVSSVSCLGAWVACRAAHRY*VTSLSL
Trigger: AAGAGAAAGGGAAGTTACCAAATACCTGTGGGCGGC...GCGGCAAGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTAGGATGCGGCCCTTCTaGCGGGCTCTGAGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: HNRRLALLSSGHTYVPSARMRPF*RALSRR
Trigger: CCGCCTGCTCAGAGCCCGCAAGAAGGGCCGCATCCT...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTGCAGCGGCTCGATCTaGGCTCACTGCAGCCTCTAC +
Preference number: 5 (lower is better)
Translates to: IILEQLVSSVSCLGAWVACSGSI*AHCSLY
Trigger: GTAGAGGCTGCAGTGAGCCAAGATCGAGCCGCTGCA...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp TCTGCCCCAGGATGCACCACGCCTGGACGTGCTCCCCCGACTCCCAGTGCCAGGTTCTTCCATCCCACTTaGTATCTTGCATTCACTTCA +
Preference number: 5 (lower is better)
Translates to: SAPGCTTPGRAPPTPSARFFHPT*YLAFTS
Trigger: TGAAGTGAATGCAAGATACAAAGTGGGATGGAAGAA...CCTGGCACTGGGAGTCGGGGGAGCACGTCCAGGCGTGGTGCATCCTGGGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS TCA 90 bp CCCAGCCTGGCCCATAGTCGAGAAGAATCAGGGCTGGAAGGCAGGTaGGAAAATCCTCACGCAAACAAGGGGCCCGCGGAGTTCAATGTT +
Preference number: 5 (lower is better)
Translates to: PSLAHSREESGLEGR*ENPHANKGPAEFNV
Trigger: AACATTGAACTCCGCGGGCCCCTTGTTTGCGTGAGGATTTTCTCACCTGCCTTCCAGCCCTGATTCTTCTCGACTATGGGCCAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468290.1
ENST00000628950.1
CDS CCA 90 bp GGCACCCACTCATTAAAGTTCTCTCGATCCCAGGGTCCCCCAGCCTaGCCCATAGTCGAGAAGAATCAGGGCTGGAAGGCAGGTGAGAAA +
Preference number: 5 (lower is better)
Translates to: GTHSLKFSRSQGPPA*PIVEKNQGWKAGEK
Trigger: TTTCTCACCTGCCTTCCAGCCCTGATTCTTCTCGACTATGGGCCAGGCTGGGGGACCCTGGGATCGAGAGAACTTTAATGAGTGGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468290.1
ENST00000628950.1
CDS-3UTR CAA 90 bp GTAACAGTCACACCAGCTCCTGTTCAGTTACAGTCTTTGTCTCATAACCGGAGATTTCTGCGCTGCGCCTaGCTGGCCGGCTCGTCTTCG +
Preference number: 5 (lower is better)
Translates to: VTVTPAPVQLQSLSHNRRFLRCA*LAGSSS
Trigger: CGAAGACGAGCCGGCCAGCAAGGCGCAGCGCAGAAA...TCTCCGGTTATGAGACAAAGACTGTAACTGAACAGGAGCTGGTGTGACTGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCAGTTCAGTTACAGTCTTaGTCTCATAACCGGAGAGTT +
Preference number: 5 (lower is better)
Translates to: ARPRSPLVALSGHNRRLAVQLQS*SHNRRV
Trigger: AACTCTCCGGTTATGAGACAAAGACTGTAACTGAAC...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTGGGCTTTTTCATCAGTaGCCTCTGTCTGGTAACAGT +
Preference number: 5 (lower is better)
Translates to: IILEQLVSSVSCLGAWVAGLFHQ*PLSGNS
Trigger: ACTGTTACCAGACAGAGGCAACTGATGAAAAAGCCC...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp GCTAGACCAAGGAGCCCTCTGGTGGCCCTGTCCGGGCATAACAGAAGGCTCGCACTGCATTGTTATTTATaGGATACAAAGCAAAAGGGG +
Preference number: 5 (lower is better)
Translates to: ARPRSPLVALSGHNRRLALHCYL*DTKQKG
Trigger: CCCCTTTTGCTTTGTATCCAATAAATAACAATGCAG...TGCGAGCCTTCTGTTATGCCCGGACAGGGCCACCAGAGGGCTCCTTGGTCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACCTAGGTCCAATGCACTaGACCCAACTCACATGCGTG +
Preference number: 5 (lower is better)
Translates to: SETGSGPECLAALLFIGYLGPMH*TQLTCV
Trigger: CACGCATGTGAGTTGGGTCAAGTGCATTGGACCTAG...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp ATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGGCGCCTGGGTGGCTTCTTTTCAGATACTGTaGTGTCTGTCTCTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: IILEQLVSSVSCLGAWVASFQIL*CLSLSS
Trigger: TGAGCTGAGAGACAGACACAACAGTATCTGAAAAGA...AGCCACCCAGGCGCCGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp AGATCCTGGGACAGAGCCAGCGTCAAGGACTCAGAGGGTGTCCTGGAGTCTCCTTCCATTTACTTTGAGTaGTTCCAACTTAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: RSWDRASVKDSEGVLESPSIYFE*FQLKLH
Trigger: ATGCAGCTTAAGTTGGAACAACTCAAAGTAAATGGA...AGGAGACTCCAGGACACCCTCTGAGTCCTTGACGCTGGCTCTGTCCCAGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp CATAACAGAAGGCTCGCACTCTTGTCTTCTGGTCACACCTATGTCCCCTCAGCTAGCGGGTGTTGTTCCTaGATACTTTTTGCTACTGCT +
Preference number: 5 (lower is better)
Translates to: HNRRLALLSSGHTYVPSASGCCS*ILFATA
Trigger: AGCAGTAGCAAAAAGTATCAAGGAACAACACCCGCT...AGCTGAGGGGACATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCTGTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp TCGGAGACCGGTAGTGGCCCCGAATGTCTGGCTGCATTGTTATTTATTGGATACTCTTTTCAGATACTGTaGTGTCTGTCTCTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: SETGSGPECLAALLFIGYSFQIL*CLSLSS
Trigger: TGAGCTGAGAGACAGACACAACAGTATCTGAAAAGA...GTATCCAATAAATAACAATGCAGCCAGACATTCGGGGCCACTACCGGTCTCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp AATTTACTACTGCTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAAAGAAGGCTCGCACTCTaGTCTTCTGGTCACACCTAT +
Preference number: 5 (lower is better)
Translates to: NLLLLSRRQSQVYRMEHERRLAL*SSGHTY
Trigger: ATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCT...TTCATGTTCCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp AATTTACTACTGCTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAAGGGCTTTTTCATCAGTaGCCTCTGTCTGGTAACAGT +
Preference number: 5 (lower is better)
Translates to: NLLLLSRRQSQVYRMEHEGLFHQ*PLSGNS
Trigger: ACTGTTACCAGACAGAGGCAACTGATGAAAAAGCCC...TTCATGTTCCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp AATTTACTACTGCTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAAGTTCAGTTACAGTCTTaGTCTCATAACCGGAGAGTT +
Preference number: 5 (lower is better)
Translates to: NLLLLSRRQSQVYRMEHEVQLQS*SHNRRV
Trigger: AACTCTCCGGTTATGAGACAAAGACTGTAACTGAAC...TTCATGTTCCATCCTGTACACCTGGCTCTGCCTTCTAGATAGCAGTAGTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp AATGACATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGAGAAGGCTCGCACTCTaGTCTTCTGGTCACACCTAT +
Preference number: 5 (lower is better)
Translates to: NDIGIRSDNDTDSLKYLKRRLAL*SSGHTY
Trigger: ATAGGTGTGACCAGAAGACAAGAGTGCGAGCCTTCT...CTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAATGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTGCCGCCCACAGGTATTaGGTAACTTCCCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: PSMFHICMERVCILFRYCAAHRY*VTSLSL
Trigger: AAGAGAAAGGGAAGTTACCAAATACCTGTGGGCGGC...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp CCTAGTTTTGGTATCAAAGCTAAGTTCACGAATGAAGTGTTCTCTCAATTGATTCAACCTGCACTCATTTaGATTGCCTGGAACTCTGGA +
Preference number: 5 (lower is better)
Translates to: PSFGIKAKFTNEVFSQLIQPALI*IAWNSG
Trigger: TCCAGAGTTCCAGGCAATCAAAATGAGTGCAGGTTG...AATCAATTGAGAGAACACTTCATTCGTGAACTTAGCTTTGATACCAAAACTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp ATTGGGATACGGTCAGATAACGACACTGATTCCTTGAAATATCTTAAGACTTCTAGCGGGTGTTGTTCCTaGATACTTTTTGCTACTGCT +
Preference number: 5 (lower is better)
Translates to: IGIRSDNDTDSLKYLKTSSGCCS*ILFATA
Trigger: AGCAGTAGCAAAAAGTATCAAGGAACAACACCCGCT...AGAAGTCTTAAGATATTTCAAGGAATCAGTGTCGTTATCTGACCGTATCCCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp TTGTTTTATATTTTATTATACTGGAACAGCTCGTGTCCTCTGTCTCTTGCCTCGTCCATTTACTTTGAGTaGTTCCAACTTAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: LFYILLYWNSSCPLSLASSIYFE*FQLKLH
Trigger: ATGCAGCTTAAGTTGGAACAACTCAAAGTAAATGGA...CGAGGCAAGAGACAGAGGACACGAGCTGTTCCAGTATAATAAAATATAAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS-3UTR CAA 90 bp CCATCCATGTTCCATATATGCATGGAAAGAGTATGTATTCTTTTCAGATACTGTCTGCATTGTTATTTATaGGATACAAAGCAAAAGGGG +
Preference number: 5 (lower is better)
Translates to: PSMFHICMERVCILFRYCLHCYL*DTKQKG
Trigger: CCCCTTTTGCTTTGTATCCAATAAATAACAATGCAG...ACAGTATCTGAAAAGAATACATACTCTTTCCATGCATATATGGAACATGGATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2
CDS CCA 72 bp CTGGAGTCTCCTAGGACGGAAGACGGCGGCCCCAGGTaGGAAAGACTCAGACCAGGCCTGCGCGCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: LESPRTEDGGPR*ERLRPGLRAPG
Trigger: ACCTGGAGCGCGCAGGCCTGGTCTGAGTCTTTCCCACCTGGGGCCGCCGTCTTCCGTCCTAGGAGACTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372022.6
ENST00000468290.1
ENST00000628950.1
ENST00000629980.2
CDS CCA 72 bp TCTGCAGGTAGGCGTCCTTGGCGAGTAGAGAGGCCATaGCGGAGACCCGGGCCGTTCACGACTCACACCTTC +
Preference number: 6 (lower is better)
Translates to: SAGRRPWRVERP*RRPGPFTTHTF
Trigger: GAAGGTGTGAGTCGTGAACGGCCCGGGTCTCCGCCATGGCCTCTCTACTCGCCAAGGACGCCTACCTGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372022.6
ENST00000629980.2