Pregenerated sensors for SURF2 (Homo sapiens)
Ensembl gene IDs: ENSG00000148291Ensembl transcript IDs: ENST00000371964.5, ENST00000486887.1, ENST00000495524.5, ENST00000626704.1, ENST00000627396.2, ENST00000630633.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCTCCCAGAAGGCTTCCCGCGGGCGAGGCCCGTCACCGTCCATCTaGTCCTCCCTCCTCCTCCTCCGGTGCACCAGGCAGGCAGGCACG | + |
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Preference number: 5 (lower is better) Translates to: GSQKASRGRGPSPSI*SSLLLLRCTRQAGT Trigger: CGTGCCTGCCTGCCTGGTGCACCGGAGGAGGAGGAGGGAGGACCAGATGGACGGTGACGGGCCTCGCCCGCGGGAAGCCTTCTGGGAGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000371964.5 ENST00000495524.5 ENST00000627396.2 ENST00000630633.2 |
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| CDS GCA 90 bp | ATGCACCTCACCTTGCGGGCGTCCGTCTGGAGCCGCAGGCTCGGGTaGTCCCGCAGAAACGCCCGCACGTCGCCCGGCAACTCGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: MHLTLRASVWSRRLG*SRRNARTSPGNSLM Trigger: CATGAGCGAGTTGCCGGGCGACGTGCGGGCGTTTCTGCGGGAGCACCCGAGCCTGCGGCTCCAGACGGACGCCCGCAAGGTGAGGTGCAT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000371964.5 ENST00000495524.5 ENST00000627396.2 ENST00000630633.2 |
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| CDS GCA 90 bp | CCCTGGGCCTCCCCGCGCCGCCGCGGACCACCTACGGGTTCTTGGTaGTGGGCACGATGTGCGGCTCGAACTCTGCATAGTCGAAGGCCG | + |
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Preference number: 5 (lower is better) Translates to: PWASPRRRGPPTGSW*WARCAARTLHSRRP Trigger: CGGCCTTCGACTATGCAGAGTTCGAGCCGCACATCGTGCCCAGCACCAAGAACCCGTAGGTGGTCCGCGGCGGCGCGGGGAGGCCCAGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000495524.5 ENST00000627396.2 |
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| CDS CCA 90 bp | TGGGCCTCCCCGCGCCGCCGCGGACCACCTACGGGTTCTTGGTGCTaGGCACGATGTGCGGCTCGAACTCTGCATAGTCGAAGGCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: WASPRRRGPPTGSWC*ARCAARTLHSRRPG Trigger: CCCCGGCCTTCGACTATGCAGAGTTCGAGCCGCACATCGTGCCCAGCACCAAGAACCCGTAGGTGGTCCGCGGCGGCGCGGGGAGGCCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000495524.5 ENST00000627396.2 |
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| CDS TCA 90 bp | ATTCCAGCACCCGGGCGCCCACCTGGGTCCCAGGGCTCCCAACTCTaGAAGAGTAGGGGCTGCAGCACTGGCGGAGTCCAGCGGAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: IPAPGRPPGSQGSQL*KSRGCSTGGVQRRG Trigger: GCCCCTCCGCTGGACTCCGCCAGTGCTGCAGCCCCTACTCTTTCAGAGTTGGGAGCCCTGGGACCCAGGTGGGCGCCCGGGTGCTGGAAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000495524.5 ENST00000627396.2 |
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| CDS GCA 90 bp | CATAGTCGAAGGCCGGGGAGGCGCGGACCAGCCGCTGGTACTTTTTaGCGCGGGTGTAGACCTGGAGCTCCGGCAGGCGGCAGGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: HSRRPGRRGPAAGTF*RGCRPGAPAGGRAA Trigger: AGCTGCCCTGCCGCCTGCCGGAGCTCCAGGTCTACACCCGCGGCAAAAAGTACCAGCGGCTGGTCCGCGCCTCCCCGGCCTTCGACTATG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000371964.5 ENST00000495524.5 ENST00000627396.2 ENST00000630633.2 |
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| CDS CCA 90 bp | TTGCCCTGGGCCTCCCCGCGCCGCCGCGGACCACCTACGGGTTCTTaGTGCTGGGCACGATGTGCGGCTCGAACTCTGCATAGTCGAAGG | + |
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Preference number: 5 (lower is better) Translates to: LPWASPRRRGPPTGS*CWARCAARTLHSRR Trigger: CCTTCGACTATGCAGAGTTCGAGCCGCACATCGTGCCCAGCACCAAGAACCCGTAGGTGGTCCGCGGCGGCGCGGGGAGGCCCAGGGCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000495524.5 ENST00000627396.2 |
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| CDS GCA 90 bp | CTGGTGCGGGTTCTTGGTGCTGGGCACGATGTGCGGCTCGAACTCTaGATAGTCGAAGGCCGGGGAGGCGCGGACCAGCCGCTGGTACTT | + |
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Preference number: 5 (lower is better) Translates to: LVRVLGAGHDVRLEL*IVEGRGGADQPLVL Trigger: AAGTACCAGCGGCTGGTCCGCGCCTCCCCGGCCTTCGACTATGCAGAGTTCGAGCCGCACATCGTGCCCAGCACCAAGAACCCGCACCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371964.5 ENST00000630633.2 |
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| CDS GCA 90 bp | CACCTACGGGTTCTTGGTGCTGGGCACGATGTGCGGCTCGAACTCTaGATAGTCGAAGGCCGGGGAGGCGCGGACCAGCCGCTGGTACTT | + |
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Preference number: 5 (lower is better) Translates to: HLRVLGAGHDVRLEL*IVEGRGGADQPLVL Trigger: AAGTACCAGCGGCTGGTCCGCGCCTCCCCGGCCTTCGACTATGCAGAGTTCGAGCCGCACATCGTGCCCAGCACCAAGAACCCGTAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000495524.5 ENST00000627396.2 |
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| CDS TCA 90 bp | GAGTTTGCAGAACAACTGGTGCCTGGGTCCCAGGGCTCCCAACTCTaGAAGAGTAGGGGCTGCAGCACTGGCGGAGTCCAGCGGAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: EFAEQLVPGSQGSQL*KSRGCSTGGVQRRG Trigger: GCCCCTCCGCTGGACTCCGCCAGTGCTGCAGCCCCTACTCTTTCAGAGTTGGGAGCCCTGGGACCCAGGCACCAGTTGTTCTGCAAACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000486887.1 ENST00000626704.1 |
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| CDS GCA 90 bp | CGGCCCTGGGTGTGCCTCAGCACGTGTTCTGGGCACTTGTTGATGTaGCGCAGGGTGAGTTTGCAGAACAACTGGTGCCTGGGTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RPWVCLSTCSGHLLM*RRVSLQNNWCLGPR Trigger: CCTGGGACCCAGGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000486887.1 ENST00000626704.1 |
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| CDS GCA 90 bp | CGGCCCTGGGTGTGCCTCAGCACGTGTTCTGGGCACTTGTTGATGTaGCGCAGGGTGAGTTTGCAGAACAACTGGTGCCAAGAGGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: RPWVCLSTCSGHLLM*RRVSLQNNWCQEAS Trigger: CGAGGCCTCTTGGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000495524.5 ENST00000627396.2 |
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| CDS CCA 90 bp | AGCTCGCTGGTACCGCCGGCCCTGGGTGTGCCTCAGCACGTGTTCTaGGCACTTGTTGATGTGCCGCAGGGTGAGTTTGCAGAACAACTG | + |
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Preference number: 5 (lower is better) Translates to: SSLVPPALGVPQHVF*ALVDVPQGEFAEQL Trigger: CAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCGGCGGTACCAGCGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000371964.5 ENST00000486887.1 ENST00000495524.5 ENST00000626704.1 ENST00000627396.2 ENST00000630633.2 |
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| CDS GCA 90 bp | CGGCCCTGGGTGTGCCTCAGCACGTGTTCTGGGCACTTGTTGATGTaGCGCAGGGTGAGTTTGCAGAACAACTGGTGCGGGTTCTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: RPWVCLSTCSGHLLM*RRVSLQNNWCGFLV Trigger: CACCAAGAACCCGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371964.5 ENST00000630633.2 |
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| CDS GCA 90 bp | TCTTCATATTTACACAGAGCTCGCTGGTACCGCCGGCCCTGGGTGTaGCTCAGCACGTGTTCTGGGCACTTGTTGATGTGCCGCAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: SSYLHRARWYRRPWV*LSTCSGHLLMCRRV Trigger: CACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCGGCGGTACCAGCGAGCTCTGTGTAAATATGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000371964.5 ENST00000486887.1 ENST00000495524.5 ENST00000626704.1 ENST00000627396.2 ENST00000630633.2 |
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| CDS CCA 72 bp | GCAGAAACGCCCGCACGTCGCCCGGCAACTCGCTCATaGCCGACGCGCCCGCGGAGCAGCCCGGCGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: AETPARRPATRS*PTRPRSSPAEA Trigger: GGCTTCCGCCGGGCTGCTCCGCGGGCGCGTCGGCCATGAGCGAGTTGCCGGGCGACGTGCGGGCGTTTCTGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371964.5 ENST00000630633.2 |
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| CDS GCA 72 bp | ACCTTGCGGGCGTCCGTCTGGAGCCGCAGGCTCGGGTaGTCCCGCAGAAACGCCCGCACGTCGCCCGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: TLRASVWSRRLG*SRRNARTSPGN Trigger: GTTGCCGGGCGACGTGCGGGCGTTTCTGCGGGAGCACCCGAGCCTGCGGCTCCAGACGGACGCCCGCAAGGT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000371964.5 ENST00000495524.5 ENST00000627396.2 ENST00000630633.2 |
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| CDS GCA 72 bp | AGGCCGGGGAGGCGCGGACCAGCCGCTGGTACTTTTTaGCGCGGGTGTAGACCTGGAGCTCCGGCAGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: RPGRRGPAAGTF*RGCRPGAPAGG Trigger: GCCGCCTGCCGGAGCTCCAGGTCTACACCCGCGGCAAAAAGTACCAGCGGCTGGTCCGCGCCTCCCCGGCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000371964.5 ENST00000495524.5 ENST00000627396.2 ENST00000630633.2 |
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| CDS GCA 72 bp | AGCACTGGCGGAGTCCAGCGGAGGGGCTGTCCTAATTaGCCTGGGCCTCCCCGCGCCGCCGCGGACCACCTA | + |
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Preference number: 6 (lower is better) Translates to: STGGVQRRGCPN*PGPPRAAADHL Trigger: TAGGTGGTCCGCGGCGGCGCGGGGAGGCCCAGGGCAATTAGGACAGCCCCTCCGCTGGACTCCGCCAGTGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000486887.1 ENST00000495524.5 ENST00000626704.1 ENST00000627396.2 |
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| CDS CCA 72 bp | GCCTCCCCGCGCCGCCGCGGACCACCTACGGGTTCTTaGTGCTGGGCACGATGTGCGGCTCGAACTCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: ASPRRRGPPTGS*CWARCAARTLH Trigger: ATGCAGAGTTCGAGCCGCACATCGTGCCCAGCACCAAGAACCCGTAGGTGGTCCGCGGCGGCGCGGGGAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000495524.5 ENST00000627396.2 |
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| CDS GCA 72 bp | GTTCTTGGTGCTGGGCACGATGTGCGGCTCGAACTCTaGATAGTCGAAGGCCGGGGAGGCGCGGACCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: VLGAGHDVRLEL*IVEGRGGADQP Trigger: CGGCTGGTCCGCGCCTCCCCGGCCTTCGACTATGCAGAGTTCGAGCCGCACATCGTGCCCAGCACCAAGAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000371964.5 ENST00000495524.5 ENST00000627396.2 ENST00000630633.2 |
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| CDS GCA 72 bp | TCACCGTCCATCTGGTCCTCCCTCCTCCTCCTCCGGTaGACCAGGCAGGCAGGCACGTACTCCACCCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SPSIWSSLLLLR*TRQAGTYSTPC Trigger: GCAAGGGGTGGAGTACGTGCCTGCCTGCCTGGTGCACCGGAGGAGGAGGAGGGAGGACCAGATGGACGGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000371964.5 ENST00000495524.5 ENST00000627396.2 ENST00000630633.2 |
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| CDS GCA 72 bp | TCCCCGCGCCGCCGCGGACCACCTACGGGTTCTTGGTaGTGGGCACGATGTGCGGCTCGAACTCTGCATAGT | + |
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Preference number: 6 (lower is better) Translates to: SPRRRGPPTGSW*WARCAARTLHS Trigger: ACTATGCAGAGTTCGAGCCGCACATCGTGCCCAGCACCAAGAACCCGTAGGTGGTCCGCGGCGGCGCGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000495524.5 ENST00000627396.2 |
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| CDS CCA 72 bp | CCGCGCCGCCGCGGACCACCTACGGGTTCTTGGTGCTaGGCACGATGTGCGGCTCGAACTCTGCATAGTCGA | + |
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Preference number: 6 (lower is better) Translates to: PRRRGPPTGSWC*ARCAARTLHSR Trigger: TCGACTATGCAGAGTTCGAGCCGCACATCGTGCCCAGCACCAAGAACCCGTAGGTGGTCCGCGGCGGCGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000495524.5 ENST00000627396.2 |
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| CDS CAA 90 bp | TGGTACCGCCGGCCCTGGGTGTGCCTCAGCACGTGTTCTGGGCACTaGTTGATGTGCCGCAGGGTGAGTTTGCAGAACAACTGGTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: WYRRPWVCLSTCSGH*LMCRRVSLQNNWCG Trigger: CCCGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCGGCGGTACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371964.5 ENST00000630633.2 |
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| CDS TCA 72 bp | GAACAACTGGTGCCTGGGTCCCAGGGCTCCCAACTCTaGAAGAGTAGGGGCTGCAGCACTGGCGGAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: EQLVPGSQGSQL*KSRGCSTGGVQ Trigger: CTGGACTCCGCCAGTGCTGCAGCCCCTACTCTTTCAGAGTTGGGAGCCCTGGGACCCAGGCACCAGTTGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000486887.1 ENST00000626704.1 |
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| CDS CCA 72 bp | GTACCGCCGGCCCTGGGTGTGCCTCAGCACGTGTTCTaGGCACTTGTTGATGTGCCGCAGGGTGAGTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: VPPALGVPQHVF*ALVDVPQGEFA Trigger: TGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCGGCGGTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000371964.5 ENST00000486887.1 ENST00000495524.5 ENST00000626704.1 ENST00000627396.2 ENST00000630633.2 |
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| CDS CAA 90 bp | TACCGCCGGCCCTGGGTGTGCCTCAGCACGTGTTCTGGGCACTTGTaGATGTGCCGCAGGGTGAGTTTGCAGAACAACTGGTGCGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: YRRPWVCLSTCSGHL*MCRRVSLQNNWCGF Trigger: GAACCCGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCGGCGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371964.5 ENST00000630633.2 |
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| CDS CAA 90 bp | TACCGCCGGCCCTGGGTGTGCCTCAGCACGTGTTCTGGGCACTTGTaGATGTGCCGCAGGGTGAGTTTGCAGAACAACTGGTGCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: YRRPWVCLSTCSGHL*MCRRVSLQNNWCLG Trigger: ACCCAGGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCGGCGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000486887.1 ENST00000626704.1 |
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| CDS CAA 90 bp | TGGTACCGCCGGCCCTGGGTGTGCCTCAGCACGTGTTCTGGGCACTaGTTGATGTGCCGCAGGGTGAGTTTGCAGAACAACTGGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: WYRRPWVCLSTCSGH*LMCRRVSLQNNWCL Trigger: CAGGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCGGCGGTACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000486887.1 ENST00000626704.1 |
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| CDS GCA 72 bp | TTACACAGAGCTCGCTGGTACCGCCGGCCCTGGGTGTaGCTCAGCACGTGTTCTGGGCACTTGTTGATGTGC | + |
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Preference number: 6 (lower is better) Translates to: LHRARWYRRPWV*LSTCSGHLLMC Trigger: GCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCGGCGGTACCAGCGAGCTCTGTGTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000371964.5 ENST00000486887.1 ENST00000495524.5 ENST00000626704.1 ENST00000627396.2 ENST00000630633.2 |
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| CDS CAA 90 bp | TACCGCCGGCCCTGGGTGTGCCTCAGCACGTGTTCTGGGCACTTGTaGATGTGCCGCAGGGTGAGTTTGCAGAACAACTGGTGCCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: YRRPWVCLSTCSGHL*MCRRVSLQNNWCQE Trigger: CTCTTGGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCGGCGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000495524.5 ENST00000627396.2 |
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| CDS CAA 90 bp | TGGTACCGCCGGCCCTGGGTGTGCCTCAGCACGTGTTCTGGGCACTaGTTGATGTGCCGCAGGGTGAGTTTGCAGAACAACTGGTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: WYRRPWVCLSTCSGH*LMCRRVSLQNNWCQ Trigger: TTGGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCGGCGGTACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000495524.5 ENST00000627396.2 |
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| CDS CAA 72 bp | CGGCCCTGGGTGTGCCTCAGCACGTGTTCTGGGCACTaGTTGATGTGCCGCAGGGTGAGTTTGCAGAACAAC | + |
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Preference number: 6 (lower is better) Translates to: RPWVCLSTCSGH*LMCRRVSLQNN Trigger: GTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000371964.5 ENST00000486887.1 ENST00000495524.5 ENST00000626704.1 ENST00000627396.2 ENST00000630633.2 |
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| CDS CAA 72 bp | TGTTCTGGGCACTTGTTGATGTGCCGCAGGGTGAGTTaGCAGAACAACTGGTGCCTGGGTCCCAGGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: CSGHLLMCRRVS*QNNWCLGPRAP Trigger: GGGAGCCCTGGGACCCAGGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000486887.1 ENST00000626704.1 |
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| CDS GCA 72 bp | GTGTGCCTCAGCACGTGTTCTGGGCACTTGTTGATGTaGCGCAGGGTGAGTTTGCAGAACAACTGGTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: VCLSTCSGHLLM*RRVSLQNNWCG Trigger: CCCGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371964.5 ENST00000630633.2 |
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| CDS CCA 72 bp | TCATATTTACACAGAGCTCGCTGGTACCGCCGGCCCTaGGTGTGCCTCAGCACGTGTTCTGGGCACTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SYLHRARWYRRP*VCLSTCSGHLL Trigger: CAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGGCCGGCGGTACCAGCGAGCTCTGTGTAAATATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000371964.5 ENST00000486887.1 ENST00000495524.5 ENST00000626704.1 ENST00000627396.2 ENST00000630633.2 |
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| CDS CAA 72 bp | CCCTGGGTGTGCCTCAGCACGTGTTCTGGGCACTTGTaGATGTGCCGCAGGGTGAGTTTGCAGAACAACTGG | + |
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Preference number: 6 (lower is better) Translates to: PWVCLSTCSGHL*MCRRVSLQNNW Trigger: CCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACACCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000371964.5 ENST00000486887.1 ENST00000495524.5 ENST00000626704.1 ENST00000627396.2 ENST00000630633.2 |
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| CDS CAA 72 bp | TGTTCTGGGCACTTGTTGATGTGCCGCAGGGTGAGTTaGCAGAACAACTGGTGCCAAGAGGCCTCGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: CSGHLLMCRRVS*QNNWCQEASPL Trigger: CAGCGGCGAGGCCTCTTGGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000495524.5 ENST00000627396.2 |
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| CDS GCA 72 bp | GTGTGCCTCAGCACGTGTTCTGGGCACTTGTTGATGTaGCGCAGGGTGAGTTTGCAGAACAACTGGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VCLSTCSGHLLM*RRVSLQNNWCL Trigger: CAGGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000486887.1 ENST00000626704.1 |
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| CDS CAA 72 bp | TGTTCTGGGCACTTGTTGATGTGCCGCAGGGTGAGTTaGCAGAACAACTGGTGCGGGTTCTTGGTGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: CSGHLLMCRRVS*QNNWCGFLVLG Trigger: GCCCAGCACCAAGAACCCGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371964.5 ENST00000630633.2 |
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| CDS GCA 72 bp | GTGTGCCTCAGCACGTGTTCTGGGCACTTGTTGATGTaGCGCAGGGTGAGTTTGCAGAACAACTGGTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: VCLSTCSGHLLM*RRVSLQNNWCQ Trigger: TTGGCACCAGTTGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCAGAACACGTGCTGAGGCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000495524.5 ENST00000627396.2 |
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| CDS CAA 72 bp | CCGGTGCACCAGGCAGGCAGGCACGTACTCCACCCCTaGCTTCTGACATTCTTCATATTTACACAGAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: PVHQAGRHVLHP*LLTFFIFTQSS Trigger: CGAGCTCTGTGTAAATATGAAGAATGTCAGAAGCAAGGGGTGGAGTACGTGCCTGCCTGCCTGGTGCACCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000371964.5 ENST00000486887.1 ENST00000495524.5 ENST00000626704.1 ENST00000627396.2 ENST00000630633.2 |
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