RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SUPT7L (Homo sapiens)

Ensembl gene IDs: ENSG00000119760

Ensembl transcript IDs: ENST00000337768.10, ENST00000404798.6, ENST00000405491.5, ENST00000406540.5, ENST00000464789.2

Found 498 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCTaGTTGCCATGCCAGCATCATATTTTATCTGTGAAGGGTGGCTTG +
Preference number: 1 (lower is better)
Translates to: CLVIVKTTIGDSALV*LPCQHHILSVKGGL
Trigger: CAAGCCACCCTTCACAGATAAAATATGATGCTGGCATGGCAATCAGACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
3UTR TCA 90 bp GCCCAGTTTGTATTGTACTCTGAACTTAATGCAAAGTCTCCTTGGTaGTTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCAT +
Preference number: 1 (lower is better)
Translates to: AQFVLYSELNAKSPW*FSQSPWIWVRGTFH
Trigger: ATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATCACCAAGGAGACTTTGCATTAAGTTCAGAGTACAATACAAACTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR CCA 90 bp TTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTaGACCAGGAGCATCAGCATCATCTGGGGAATTGTTCAACTTACC +
Preference number: 1 (lower is better)
Translates to: FISMSQYSNLVVLTL*TRSISIIWGIVQLT
Trigger: GGTAAGTTGAACAATTCCCCAGATGATGCTGATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR GCA 90 bp AAAGGCTGCCTTTACAGTAGAAGCAGCAAAGTGTGCTTAATGGACTaGTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAATATGCA +
Preference number: 1 (lower is better)
Translates to: KGCLYSRSSKVCLMD*CPLMTKQMQQMKYA
Trigger: TGCATATTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACACTTTGCTGCTTCTACTGTAAAGGCAGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR CCA 90 bp ATGACCAAGCAAATGCAACAAATGAAATATGCACAAGGCTGTCCTTaGACAGTACTTGTTTGCTTTGCTCACAAAGGAGAAAAGGAAAGA +
Preference number: 1 (lower is better)
Translates to: MTKQMQQMKYAQGCP*TVLVCFAHKGEKER
Trigger: TCTTTCCTTTTCTCCTTTGTGAGCAAAGCAAACAAGTACTGTCCAAGGACAGCCTTGTGCATATTTCATTTGTTGCATTTGCTTGGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR GCA 90 bp CAAGATATATTTTGCATCAGAAAATCAAACTTCAGCAGTTTAACATaGTGGCATCCATCACCAAGGCATGAAGCAACACATTTGCTAATG +
Preference number: 1 (lower is better)
Translates to: QDIFCIRKSNFSSLT*WHPSPRHEATHLLM
Trigger: CATTAGCAAATGTGTTGCTTCATGCCTTGGTGATGGATGCCAGCATGTTAAACTGCTGAAGTTTGATTTTCTGATGCAAAATATATCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR CCA 90 bp GATATATTTTGCATCAGAAAATCAAACTTCAGCAGTTTAACATGCTaGCATCCATCACCAAGGCATGAAGCAACACATTTGCTAATGATT +
Preference number: 1 (lower is better)
Translates to: DIFCIRKSNFSSLTC*HPSPRHEATHLLMI
Trigger: AATCATTAGCAAATGTGTTGCTTCATGCCTTGGTGATGGATGCCAGCATGTTAAACTGCTGAAGTTTGATTTTCTGATGCAAAATATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGGTAATCCCAGCACTTTaGGAGCCCGAGGCGGGCAGA +
Preference number: 2 (lower is better)
Translates to: VLNVCWMNELNSHTATLWVIPAL*EPEAGR
Trigger: TCTGCCCGCCTCGGGCTCCCAAAGTGCTGGGATTAC...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR GCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACGCAGTGAGTCGAAATTaGACCATTGCACTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHAVSRN*TIALQP
Trigger: AGGCTGGAGTGCAATGGTGCAATTTCGACTCACTGC...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAATTGGGGACAGTGCTTTaGTCTGATTGCCATGCCAGC +
Preference number: 2 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKLGTVL*SDCHAS
Trigger: GCTGGCATGGCAATCAGACCAAAGCACTGTCCCCAA...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR CAA 90 bp TGGTTCTCACATTGTGGACCAGGAGCATCAGCATCATCTGGGGAATaGTTCAACTTACCTCTTATAACCTATGAACTCAGAAACCCTGGG +
Preference number: 2 (lower is better)
Translates to: WFSHCGPGASASSGE*FNLPLITYELRNPG
Trigger: CCCAGGGTTTCTGAGTTCATAGGTTATAAGAGGTAAGTTGAACAATTCCCCAGATGATGCTGATGCTCCTGGTCCACAATGTGAGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR GCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACAACAATTGGGGACAGTaGTTTGGTCTGATTGCCATG +
Preference number: 2 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHNNWGQ*FGLIAM
Trigger: CATGGCAATCAGACCAAAGCACTGTCCCCAATTGTT...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR GCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCAGAAGCAGCAAAGTGTaGTTAATGGACTGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIRSSKV*LMDCCP
Trigger: AGGACAGCAGTCCATTAAGCACACTTTGCTGCTTCT...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACAGTAATCCCAGCACTTTaGGAGCCCGAGGCGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTVIPAL*EPEAGR
Trigger: TCTGCCCGCCTCGGGCTCCCAAAGTGCTGGGATTAC...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCCTCGTCTTGACCATCTaGTGCCTGTTATGCAGTTTA +
Preference number: 2 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSILVLTI*CLLCSL
Trigger: TAAACTGCATAACAGGCACCAGATGGTCAAGACGAG...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR TCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCGTAATGGGTTCCCAATaGCCTGAGCCAAAAATGAAT +
Preference number: 2 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIVMGSQ*PEPKMN
Trigger: ATTCATTTTTGGCTCAGGTCATTGGGAACCCATTAC...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR TCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATGCATAGTAGCCTATaGCATAATTCCAGACCAGGT +
Preference number: 2 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHMHSSL*HNSRPG
Trigger: ACCTGGTCTGGAATTATGTCATAGGCTACTATGCAT...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR GCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACGTGCTTTGGTCTGATTaGCATGCCAGCATCATATTT +
Preference number: 2 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHVLWSD*HASIIF
Trigger: AAATATGATGCTGGCATGGCAATCAGACCAAAGCAC...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR GCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCAGAAGCAGCAAAGTGTaGTTAATGGACTGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSRSSKV*LMDCCP
Trigger: AGGACAGCAGTCCATTAAGCACACTTTGCTGCTTCT...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR GCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCTTCAGCAGTTTAACATaGTGGCATCCATCACCAAGG +
Preference number: 2 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSFSSLT*WHPSPR
Trigger: CCTTGGTGATGGATGCCAGCATGTTAAACTGCTGAA...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCAGCTGTGCCTTATTTTaGTCTGCATTAAAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSISCALF*SALKEW
Trigger: CCACTCCTTTAATGCAGACCAAAATAAGGCACAGCT...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACAGCTGTGCCTTATTTTaGTCTGCATTAAAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHSCALF*SALKEW
Trigger: CCACTCCTTTAATGCAGACCAAAATAAGGCACAGCT...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCAGAAACCCTGGGGGTaGGCTGAGCAGTCTGTTTTA +
Preference number: 2 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYQKPWG*AEQSVL
Trigger: TAAAACAGACTGCTCAGCCCACCCCCAGGGTTTCTG...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR TCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCTGCAACCTTGTTTGGTaGCGTCCAGTTCCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: CITCLVIVKTTIGDSALVCNLVW*RPVPLE
Trigger: TTCCAGAGGAACTGGACGTCACCAAACAAGGTTGCA...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
3UTR-3UTR TCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCTATGGTGAAAGTATGTaGGTCCGAGCAGAAATAACA +
Preference number: 2 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIYGESM*VRAEIT
Trigger: TGTTATTTCTGCTCGGACTCACATACTTTCACCATA...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR TCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCTGTTTGCTGGATGAATaGACTAAATTCCCATACGGC +
Preference number: 2 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSCLLDE*TKFPYG
Trigger: GCCGTATGGGAATTTAGTTCATTCATCCAGCAAACA...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR TCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAGCAAAGTCTCCTTGGTaGTTTTCGCAAAGTCCGTGG +
Preference number: 2 (lower is better)
Translates to: HILTKYRARPSLYCTLNLAKSPW*FSQSPW
Trigger: CCACGGACTTTGCGAAAATCACCAAGGAGACTTTGC...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR GCA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGGTGTGCTTAATGGACTaGTGTCCTCTGATGACCAAG +
Preference number: 2 (lower is better)
Translates to: VLNVCWMNELNSHTATLWVCLMD*CPLMTK
Trigger: CTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCCTTAGTGGGAACCACTaGTCTCAAAATTTGAAGCTA +
Preference number: 2 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSILSGNH*SQNLKL
Trigger: TAGCTTCAAATTTTGAGACCAGTGGTTCCCACTAAG...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR TCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAATGCAACCTTGTTTGGTaGCGTCCAGTTCCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: ITALINVCPASTFYSILKCNLVW*RPVPLE
Trigger: TTCCAGAGGAACTGGACGTCACCAAACAAGGTTGCA...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR GCA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAAGTGCTTTGGTCTGATTaGCATGCCAGCATCATATTT +
Preference number: 2 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKVLWSD*HASIIF
Trigger: AAATATGATGCTGGCATGGCAATCAGACCAAAGCAC...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR GCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCAGTACTTGTTTGCTTTaGTCACAAAGGAGAAAAGGA +
Preference number: 2 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSISTCLL*SQRRKG
Trigger: TCCTTTTCTCCTTTGTGAGCAAAGCAAACAAGTACT...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGGCACAAGGCTGTCCTTaGACAGTACTTGTTTGCTTT +
Preference number: 2 (lower is better)
Translates to: VLNVCWMNELNSHTATLWAQGCP*TVLVCF
Trigger: AAAGCAAACAAGTACTGTCCAAGGACAGCCTTGTGC...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACACAGAAACCCTGGGGGTaGGCTGAGCAGTCTGTTTTA +
Preference number: 2 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTQKPWG*AEQSVL
Trigger: TAAAACAGACTGCTCAGCCCACCCCCAGGGTTTCTG...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTATTTTCGCAAAGTCCGTaGATTTGGGTCAGAGGCACA +
Preference number: 2 (lower is better)
Translates to: HILTKYRARPSLYCTLNLFSQSP*IWVRGT
Trigger: TGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAA...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR CAA 90 bp GATGACCAAGCAAATGCAACAAATGAAATATGCACAAGGCTGTCCTaGGACAGTACTTGTTTGCTTTGCTCACAAAGGAGAAAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: DDQANATNEICTRLS*DSTCLLCSQRRKGK
Trigger: CTTTCCTTTTCTCCTTTGTGAGCAAAGCAAACAAGTACTGTCCAAGGACAGCCTTGTGCATATTTCATTTGTTGCATTTGCTTGGTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR CAA 90 bp AATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATaGTGGACCAGGAGCATCAGCATCATCTGGGGAATTGTTCAACTT +
Preference number: 2 (lower is better)
Translates to: NFISMSQYSNLVVLT*WTRSISIIWGIVQL
Trigger: AAGTTGAACAATTCCCCAGATGATGCTGATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR TCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATGCAACCTTGTTTGGTaGCGTCCAGTTCCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTCNLVW*RPVPLE
Trigger: TTCCAGAGGAACTGGACGTCACCAAACAAGGTTGCA...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTGCAACCTTGTTTGGTaGCGTCCAGTTCCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: INGCITCLVIVKTTIGDSCNLVW*RPVPLE
Trigger: TTCCAGAGGAACTGGACGTCACCAAACAAGGTTGCA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
3UTR-3UTR TCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAGGGTTCCCAATGACCTaGGCCAAAAATGAATCAAGT +
Preference number: 2 (lower is better)
Translates to: HILTKYRARPSLYCTLNLGFPMT*AKNESS
Trigger: ACTTGATTCATTTTTGGCTCAGGTCATTGGGAACCC...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR TCA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATATATTTCCCTCGTCTTaGCCATCTGGTGCCTGTTAT +
Preference number: 2 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYIFPSS*PSGACY
Trigger: ATAACAGGCACCAGATGGTCAAGACGAGGGAAATAT...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR GCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAGCCCTTATAAACGTTTaGCCTGCCTCCACATTTTAC +
Preference number: 2 (lower is better)
Translates to: HILTKYRARPSLYCTLNLALINV*PASTFY
Trigger: GTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGC...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR TCA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATGTAATGGGTTCCCAATaGCCTGAGCCAAAAATGAAT +
Preference number: 2 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYVMGSQ*PEPKMN
Trigger: ATTCATTTTTGGCTCAGGTCATTGGGAACCCATTAC...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR TCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACAACCTCTTATAACCTATaGACTCAGAAACCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTTSYNL*TQKPWG
Trigger: CCCCCAGGGTTTCTGAGTTCATAGGTTATAAGAGGT...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR GCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAAAACAATTGGGGACAGTaGTTTGGTCTGATTGCCATG +
Preference number: 2 (lower is better)
Translates to: ITALINVCPASTFYSILKNNWGQ*FGLIAM
Trigger: CATGGCAATCAGACCAAAGCACTGTCCCCAATTGTT...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGTTTATCTGTGAAGGGTaGCTTGGTTGTGGAAAACTA +
Preference number: 2 (lower is better)
Translates to: VLNVCWMNELNSHTATLWFICEG*LGCGKL
Trigger: TAGTTTTCCACAACCAAGCCACCCTTCACAGATAAA...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR TCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAATGTTGTTCAGGACATaGTGTAAAGTTGAAAGGTGC +
Preference number: 2 (lower is better)
Translates to: HILTKYRARPSLYCTLNLMLFRT*CKVERC
Trigger: GCACCTTTCAACTTTACATCATGTCCTGAACAACAT...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGTGCTTTGGTCTGATTaGCATGCCAGCATCATATTT +
Preference number: 2 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTVLWSD*HASIIF
Trigger: AAATATGATGCTGGCATGGCAATCAGACCAAAGCAC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
3UTR-3UTR GCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAAGTCTTGACCATCTGGTaGCTGTTATGCAGTTTAACA +
Preference number: 2 (lower is better)
Translates to: ITALINVCPASTFYSILKVLTIW*LLCSLT
Trigger: TGTTAAACTGCATAACAGGCACCAGATGGTCAAGAC...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTATTTATCTGTGAAGGGTaGCTTGGTTGTGGAAAACTA +
Preference number: 2 (lower is better)
Translates to: HILTKYRARPSLYCTLNLFICEG*LGCGKL
Trigger: TAGTTTTCCACAACCAAGCCACCCTTCACAGATAAA...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCTTTATCTGTGAAGGGTaGCTTGGTTGTGGAAAACTA +
Preference number: 2 (lower is better)
Translates to: CITCLVIVKTTIGDSALVFICEG*LGCGKL
Trigger: TAGTTTTCCACAACCAAGCCACCCTTCACAGATAAA...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
3UTR-3UTR CCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACAAGCAGTTTAACATGCTaGCATCCATCACCAAGGCAT +
Preference number: 2 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTSSLTC*HPSPRH
Trigger: ATGCCTTGGTGATGGATGCCAGCATGTTAAACTGCT...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAGTGGGAACCACTaGTCTCAAAATTTGAAGCTA +
Preference number: 2 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYLSGNH*SQNLKL
Trigger: TAGCTTCAAATTTTGAGACCAGTGGTTCCCACTAAG...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR TCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATCCATCACCAAGGCATaGAGCAACACATTTGCTAAT +
Preference number: 2 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTSITKA*SNTFAN
Trigger: ATTAGCAAATGTGTTGCTTCATGCCTTGGTGATGGA...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR CAA 90 bp TTCTCTGTAGTACTTTTGAATGCTTTATCTTCCTTACAGAATAACTaGTCTTCCTTATGCTTCAAGCTCCAAAAGGGTAAGGAAGAAGTC +
Preference number: 2 (lower is better)
Translates to: FSVVLLNALSSLQNN*SSLCFKLQKGKEEV
Trigger: GACTTCTTCCTTACCCTTTTGGAGCTTGAAGCATAAGGAAGACAAGTTATTCTGTAAGGAAGATAAAGCATTCAAAAGTACTACAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR TCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATATGGTGAAAGTATGTaGGTCCGAGCAGAAATAACA +
Preference number: 2 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTYGESM*VRAEIT
Trigger: TGTTATTTCTGCTCGGACTCACATACTTTCACCATA...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR GCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAATTGAAAGGTGCATATTaGTATGTTTTAAAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: ITALINVCPASTFYSILKLKGAY*YVLKAA
Trigger: GGCAGCCTTTAAAACATAGCAATATGCACCTTTCAA...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTTTATCTGTGAAGGGTaGCTTGGTTGTGGAAAACTA +
Preference number: 2 (lower is better)
Translates to: INGCITCLVIVKTTIGDSFICEG*LGCGKL
Trigger: TAGTTTTCCACAACCAAGCCACCCTTCACAGATAAA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
3UTR CAA 90 bp ATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTaGTACAAGATAAATGGCTGTATAACATGTCTAGTCATAGTTAAG +
Preference number: 2 (lower is better)
Translates to: ILTSLQGRSKYDSSQ*YKINGCITCLVIVK
Trigger: CTTAACTATGACTAGACATGTTATACAGCCATTTATCTTGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
3UTR-3UTR GCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAATTTATGGAAACTAACTaGCTAATCGCCACTTTCATT +
Preference number: 2 (lower is better)
Translates to: ITALINVCPASTFYSILKFMETN*LIATFI
Trigger: AATGAAAGTGGCGATTAGGCAGTTAGTTTCCATAAA...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACTTAGTGGTTCTCACATaGTGGACCAGGAGCATCAGC +
Preference number: 3 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHLVVLT*WTRSIS
Trigger: GCTGATGCTCCTGGTCCACAATGTGAGAACCACTAA...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCCATATTTCCCTCGTCTaGACCATCTGGTGCCTGTTA +
Preference number: 3 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIHISLV*TIWCLL
Trigger: TAACAGGCACCAGATGGTCAAGACGAGGGAAATATG...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR CCA 72 bp ATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTaGACCAGGAGCATCAGCATCATCTGGGGAATTGTT +
Preference number: 3 (lower is better)
Translates to: MSQYSNLVVLTL*TRSISIIWGIV
Trigger: AACAATTCCCCAGATGATGCTGATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACTCTGTGAAGGGTGGCTaGGTTGTGGAAAACTATAAA +
Preference number: 3 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHSVKGG*VVENYK
Trigger: TTTATAGTTTTCCACAACCAAGCCACCCTTCACAGA...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCTTGGACAGTACTTGTTaGCTTTGCTCACAAAGGAGA +
Preference number: 3 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSILDSTC*LCSQRR
Trigger: TCTCCTTTGTGAGCAAAGCAAACAAGTACTGTCCAA...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACTTGGACAGTACTTGTTaGCTTTGCTCACAAAGGAGA +
Preference number: 3 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHLDSTC*LCSQRR
Trigger: TCTCCTTTGTGAGCAAAGCAAACAAGTACTGTCCAA...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTATGCAGTGAGTCGAAATaGCACCATTGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: HILTKYRARPSLYCTLNLCSESK*HHCTPA
Trigger: GGCTGGAGTGCAATGGTGCAATTTCGACTCACTGCA...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR TCA 72 bp GTATTGTACTCTGAACTTAATGCAAAGTCTCCTTGGTaGTTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGC +
Preference number: 3 (lower is better)
Translates to: VLYSELNAKSPW*FSQSPWIWVRG
Trigger: GCCTCTGACCCAAATCCACGGACTTTGCGAAAATCACCAAGGAGACTTTGCATTAAGTTCAGAGTACAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAACAAAAACCTTTTCTGTaGGGTCTAGTAGGTCTGGAC +
Preference number: 3 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKQKPFL*GLVGLD
Trigger: GTCCAGACCTACTAGACCCAACAGAAAAGGTTTTTG...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAATCTGTGAAGGGTGGCTaGGTTGTGGAAAACTATAAA +
Preference number: 3 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKSVKGG*VVENYK
Trigger: TTTATAGTTTTCCACAACCAAGCCACCCTTCACAGA...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATTGCACAAGGCTGTCCTaGGACAGTACTTGTTTGCTT +
Preference number: 3 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYCTRLS*DSTCLL
Trigger: AAGCAAACAAGTACTGTCCAAGGACAGCCTTGTGCA...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCATATTTCCCTCGTCTaGACCATCTGGTGCCTGTTA +
Preference number: 3 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYHISLV*TIWCLL
Trigger: TAACAGGCACCAGATGGTCAAGACGAGGGAAATATG...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR TCA 72 bp AAAGCCCTCCATGTGATTCTGATGCATAGTAGCCTATaGCATAATTCCAGACCAGGTGAATCTCAAGATACT +
Preference number: 3 (lower is better)
Translates to: KALHVILMHSSL*HNSRPGESQDT
Trigger: AGTATCTTGAGATTCACCTGGTCTGGAATTATGTCATAGGCTACTATGCATCAGAATCACATGGAGGGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR CCA 72 bp TGCATCAGAAAATCAAACTTCAGCAGTTTAACATGCTaGCATCCATCACCAAGGCATGAAGCAACACATTTG +
Preference number: 3 (lower is better)
Translates to: CIRKSNFSSLTC*HPSPRHEATHL
Trigger: CAAATGTGTTGCTTCATGCCTTGGTGATGGATGCCAGCATGTTAAACTGCTGAAGTTTGATTTTCTGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCCAAAAACCTTTTCTGTaGGGTCTAGTAGGTCTGGAC +
Preference number: 3 (lower is better)
Translates to: CITCLVIVKTTIGDSALVQKPFL*GLVGLD
Trigger: GTCCAGACCTACTAGACCCAACAGAAAAGGTTTTTG...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
3UTR-3UTR CAA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATAAAATGCAACCTTGTTaGGTGACGTCCAGTTCCTCT +
Preference number: 3 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYKMQPC*VTSSSS
Trigger: AGAGGAACTGGACGTCACCAAACAAGGTTGCATTTT...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCAAAATGCAACCTTGTTaGGTGACGTCCAGTTCCTCT +
Preference number: 3 (lower is better)
Translates to: CITCLVIVKTTIGDSALVKMQPC*VTSSSS
Trigger: AGAGGAACTGGACGTCACCAAACAAGGTTGCATTTT...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
3UTR-3UTR CAA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAGTCCTTGGACAGTACTaGTTTGCTTTGCTCACAAAG +
Preference number: 3 (lower is better)
Translates to: HILTKYRARPSLYCTLNLVLGQY*FALLTK
Trigger: CTTTGTGAGCAAAGCAAACAAGTACTGTCCAAGGAC...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAATGCACAAGGCTGTCCTaGGACAGTACTTGTTTGCTT +
Preference number: 3 (lower is better)
Translates to: ITALINVCPASTFYSILKCTRLS*DSTCLL
Trigger: AAGCAAACAAGTACTGTCCAAGGACAGCCTTGTGCA...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCTCTGTGAAGGGTGGCTaGGTTGTGGAAAACTATAAA +
Preference number: 3 (lower is better)
Translates to: CITCLVIVKTTIGDSALVSVKGG*VVENYK
Trigger: TTTATAGTTTTCCACAACCAAGCCACCCTTCACAGA...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
3UTR-3UTR CAA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCAGTACTTGTTTGCTTaGCTCACAAAGGAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYQYLFA*LTKEKR
Trigger: CCTTTTCTCCTTTGTGAGCAAAGCAAACAAGTACTG...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTACAGTACTTGTTTGCTTaGCTCACAAAGGAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: HILTKYRARPSLYCTLNLQYLFA*LTKEKR
Trigger: CCTTTTCTCCTTTGTGAGCAAAGCAAACAAGTACTG...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGGTTGAAAGGTGCATATaGCTATGTTTTAAAGGCTGC +
Preference number: 3 (lower is better)
Translates to: VLNVCWMNELNSHTATLWVERCI*LCFKGC
Trigger: GCAGCCTTTAAAACATAGCAATATGCACCTTTCAAC...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATAAGCTGTGCCTTATTTaGGTCTGCATTAAAGGAGTG +
Preference number: 3 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYKLCLI*VCIKGV
Trigger: CACTCCTTTAATGCAGACCAAAATAAGGCACAGCTT...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR CCA 72 bp CAAATGCAACAAATGAAATATGCACAAGGCTGTCCTTaGACAGTACTTGTTTGCTTTGCTCACAAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: QMQQMKYAQGCP*TVLVCFAHKGE
Trigger: TTCTCCTTTGTGAGCAAAGCAAACAAGTACTGTCCAAGGACAGCCTTGTGCATATTTCATTTGTTGCATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCAAAAACCTTTTCTGTaGGGTCTAGTAGGTCTGGAC +
Preference number: 3 (lower is better)
Translates to: INGCITCLVIVKTTIGDSQKPFL*GLVGLD
Trigger: GTCCAGACCTACTAGACCCAACAGAAAAGGTTTTTG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
3UTR-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATCTGTGAAGGGTGGCTaGGTTGTGGAAAACTATAAA +
Preference number: 3 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTSVKGG*VVENYK
Trigger: TTTATAGTTTTCCACAACCAAGCCACCCTTCACAGA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
3UTR-3UTR CAA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATGCATCATCTGGGGAATaGTTCAACTTACCTCTTATA +
Preference number: 3 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYASSGE*FNLPLI
Trigger: TATAAGAGGTAAGTTGAACAATTCCCCAGATGATGC...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR GCA 72 bp AGGCACATTTCATACATAACAGCCCTTATAAACGTTTaGCCTGCCTCCACATTTTACAGTATCTTAAAACAG +
Preference number: 3 (lower is better)
Translates to: RHISYITALINV*PASTFYSILKQ
Trigger: CTGTTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTCTGTGAAGGGTGGCTaGGTTGTGGAAAACTATAAA +
Preference number: 3 (lower is better)
Translates to: INGCITCLVIVKTTIGDSSVKGG*VVENYK
Trigger: TTTATAGTTTTCCACAACCAAGCCACCCTTCACAGA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
3UTR-3UTR CAA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCATGAAGCAACACATTaGCTAATGATTCCTAATCAC +
Preference number: 3 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYHEATH*LMIPNH
Trigger: GTGATTAGGAATCATTAGCAAATGTGTTGCTTCATG...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR-3UTR CAA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAAGCATCATCTGGGGAATaGTTCAACTTACCTCTTATA +
Preference number: 3 (lower is better)
Translates to: ITALINVCPASTFYSILKASSGE*FNLPLI
Trigger: TATAAGAGGTAAGTTGAACAATTCCCCAGATGATGC...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR GCA 72 bp ACTAAATTCCCATACGGCCACTTTATGGAAACTAACTaGCTAATCGCCACTTTCATTATAAACAAAGGAAAA +
Preference number: 3 (lower is better)
Translates to: TKFPYGHFMETN*LIATFIINKGK
Trigger: TTTTCCTTTGTTTATAATGAAAGTGGCGATTAGGCAGTTAGTTTCCATAAAGTGGCCGTATGGGAATTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCGGACCTCGAGAGGCCTaGGGCAAGGATCGCGTCAGA +
Preference number: 4 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIGPREA*GKDRVR
Trigger: TCTGACGCGATCCTTGCCTCAGGCCTCTCGAGGTCC...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCGGGGCTTCGGCTTGTTaGCTGAGGGTTGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIGASAC*LRVGAG
Trigger: CCCTGCACCAACCCTCAGCCAACAAGCCGAAGCCCC...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR TCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCGGACCTCGAGAGGCCTaGGGCAAGGATCGCGTCAGA +
Preference number: 4 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSGPREA*GKDRVR
Trigger: TCTGACGCGATCCTTGCCTCAGGCCTCTCGAGGTCC...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACCCAATCACAGGGTCCTaGGGTCGCCTGACGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHPITGS*GRLTFR
Trigger: CCTGAACGTCAGGCGACCTCAGGACCCTGTGATTGG...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACACGGAGCCCAAGGAATaGCCAAGTCCCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHTEPKE*PSPSRG
Trigger: ACCCCTGGAGGGACTTGGGCATTCCTTGGGCTCCGT...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTACGTCGCAGAGCGGGCTaGGCGGCTGTCTGGACCTCG +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLRRRAG*AAVWTS
Trigger: CGAGGTCCAGACAGCCGCCCAGCCCGCTCTGCGACG...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGGGTCCTGAGGTCGCCTaGCGTTCAGGGCAGCCGGAA +
Preference number: 4 (lower is better)
Translates to: VLNVCWMNELNSHTATLWGPEVA*RSGQPE
Trigger: TTCCGGCTGCCCTGAACGTCAGGCGACCTCAGGACC...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCGGGAAGCGTTCGCTCTaGGCCCCAAGCACTCCCATA +
Preference number: 4 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSGKRSL*APSTPI
Trigger: TATGGGAGTGCTTGGGGCTCAGAGCGAACGCTTCCC...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGCAGGGGAGGACCCCATaGGGCTGTCAGTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VLNVCWMNELNSHTATLWQGRTP*GCQWSG
Trigger: CCCACTCCACTGACAGCCTCATGGGGTCCTCCCCTG...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCTCTTGCAGCGCTGGTTaGAAACAGGGGAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSISCSAG*KQGRTP
Trigger: TGGGGTCCTCCCCTGTTTTCAACCAGCGCTGCAAGA...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCCACACTATTCACTGCTaGGTCGCAGAGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSHTIHC*VAERAG
Trigger: CCCAGCCCGCTCTGCGACGCAGCAGTGAATAGTGTG...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATGGCTGGGCGGCTGTCTaGACCTCGAGAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYGWAAV*TSRGLR
Trigger: CCTCAGGCCTCTCGAGGTCCAGACAGCCGCCCAGCC...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGGCTGGGCGGCTGTCTaGACCTCGAGAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVGWAAV*TSRGLR
Trigger: CCTCAGGCCTCTCGAGGTCCAGACAGCCGCCCAGCC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAGGTCCTGAGGTCGCCTaGCGTTCAGGGCAGCCGGAA +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLGPEVA*RSGQPE
Trigger: TTCCGGCTGCCCTGAACGTCAGGCGACCTCAGGACC...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCCACTCCCATAGGCAGTaGCTGGTCTCCAGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIHSHRQ*LVSRSK
Trigger: CTTGCTTCTGGAGACCAGTCACTGCCTATGGGAGTG...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCGAGTCATCAGGGCTCTaGGGAATCCCAGCTTCACTC +
Preference number: 4 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIESSGL*GIPASL
Trigger: GAGTGAAGCTGGGATTCCTCAGAGCCCTGATGACTC...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCCAGGGGAGGACCCCATaGGGCTGTCAGTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVQGRTP*GCQWSG
Trigger: CCCACTCCACTGACAGCCTCATGGGGTCCTCCCCTG...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCACCCTGGGGGTGGGCTaGGCAGTCTGTTTTAGAAAG +
Preference number: 4 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSITLGVG*AVCFRK
Trigger: CTTTCTAAAACAGACTGCTCAGCCCACCCCCAGGGT...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCCTCTCTGGGTCACTGTaGCGGATCTGGAATGGTGCA +
Preference number: 4 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSILSGSL*RIWNGA
Trigger: TGCACCATTCCAGATCCGGCACAGTGACCCAGAGAG...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGAGATCCTTGCCTGCTaGGTCGCAGAGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVEILAC*VAERAG
Trigger: CCCAGCCCGCTCTGCGACGCAGCAGGCAAGGATCTC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464789.2
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGGCTGGGCGGCTGTCTaGACCTCGAGAGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTGWAAV*TSRGLR
Trigger: CCTCAGGCCTCTCGAGGTCCAGACAGCCGCCCAGCC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCGTCGCAGAGCGGGCTaGGCGGCTGTCTGGACCTCG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSRRRAG*AAVWTS
Trigger: CGAGGTCCAGACAGCCGCCCAGCCCGCTCTGCGACG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAAGGGTTGGTGCAGGGGTaGGTCATGGACTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKGLVQG*VMDFHQ
Trigger: CTGGTGGAAGTCCATGACCCACCCCTGCACCAACCC...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CCA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAACAGTCAAAGCCCGCGTaGGCCAGGATTGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKQSKPA*ARIVAT
Trigger: AGTGGCCACAATCCTGGCCCACGCGGGCTTTGACTG...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGGTCCTGAGGTCGCCTaGCGTTCAGGGCAGCCGGAA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTGPEVA*RSGQPE
Trigger: TTCCGGCTGCCCTGAACGTCAGGCGACCTCAGGACC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS-3UTR TCA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTCGGCTTGTTGGCTaGGGGTTGGTGCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYLRLVG*GLVQGW
Trigger: CCACCCCTGCACCAACCCTCAGCCAACAAGCCGAAG...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR TCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACGAGACTACATGGCTCTaGGGGGATGTCCAGCATAGT +
Preference number: 4 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHETTWL*GDVQHS
Trigger: ACTATGCTGGACATCCCCTCAGAGCCATGTAGTCTC...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR TCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCACCATAGCTGCTATCTaGGTCATCAGGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSITIAAI*VIRALR
Trigger: CCTCAGAGCCCTGATGACTCAGATAGCAGCTATGGT...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACAGGGGAGGACCCCATaGGGCTGTCAGTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTQGRTP*GCQWSG
Trigger: CCCACTCCACTGACAGCCTCATGGGGTCCTCCCCTG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGCAGGATTGTGGCCACTaGCTGGTAGAGGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: VLNVCWMNELNSHTATLWQDCGH*LVEELP
Trigger: CGGCAGCTCCTCTACCAGGCAGTGGCCACAATCCTG...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGGGGCTTCGGCTTGTTaGCTGAGGGTTGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVGASAC*LRVGAG
Trigger: CCCTGCACCAACCCTCAGCCAACAAGCCGAAGCCCC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCCAGAAACCCTGGGGGTaGGCTGAGCAGTCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIQKPWG*AEQSVL
Trigger: TAAAACAGACTGCTCAGCCCACCCCCAGGGTTTCTG...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGGACCTCGAGAGGCCTaGGGCAAGGATCGCGTCAGA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTGPREA*GKDRVR
Trigger: TCTGACGCGATCCTTGCCTCAGGCCTCTCGAGGTCC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGGTCCTGAGGTCGCCTaGCGTTCAGGGCAGCCGGAA +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSGPEVA*RSGQPE
Trigger: TTCCGGCTGCCCTGAACGTCAGGCGACCTCAGGACC...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS-3UTR TCA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCCAATCACAGGGTCCTaGGGTCGCCTGACGTTCAGG +
Preference number: 4 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYPITGS*GRLTFR
Trigger: CCTGAACGTCAGGCGACCTCAGGACCCTGTGATTGG...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACTTCGGCTTGTTGGCTaGGGGTTGGTGCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTLRLVG*GLVQGW
Trigger: CCACCCCTGCACCAACCCTCAGCCAACAAGCCGAAG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAGGGAAGCGTTCGCTCTaGGCCCCAAGCACTCCCATA +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLGKRSL*APSTPI
Trigger: TATGGGAGTGCTTGGGGCTCAGAGCGAACGCTTCCC...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGGGAAGCGTTCGCTCTaGGCCCCAAGCACTCCCATA +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVGKRSL*APSTPI
Trigger: TATGGGAGTGCTTGGGGCTCAGAGCGAACGCTTCCC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCAGCTTCACTCATGCCTaGCATAGGCTCCTCGAAGAC +
Preference number: 4 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSSFTHA*HRLLED
Trigger: GTCTTCGAGGAGCCTATGTCAGGCATGAGTGAAGCT...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCAGGGGAGGACCCCATaGGGCTGTCAGTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSQGRTP*GCQWSG
Trigger: CCCACTCCACTGACAGCCTCATGGGGTCCTCCCCTG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGTCTTGCAGCGCTGGTTaGAAACAGGGGAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: VLNVCWMNELNSHTATLWSCSAG*KQGRTP
Trigger: TGGGGTCCTCCCCTGTTTTCAACCAGCGCTGCAAGA...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAAACCCTGGGGGTGGGCTaGGCAGTCTGTTTTAGAAAG +
Preference number: 4 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKTLGVG*AVCFRK
Trigger: CTTTCTAAAACAGACTGCTCAGCCCACCCCCAGGGT...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACGCAAAGTCTCCTTGGTaGTTTTCGCAAAGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHAKSPW*FSQSPW
Trigger: CCACGGACTTTGCGAAAATCACCAAGGAGACTTTGC...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCACGGAGCCCAAGGAATaGCCAAGTCCCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVTEPKE*PSPSRG
Trigger: ACCCCTGGAGGGACTTGGGCATTCCTTGGGCTCCGT...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS-3UTR GCA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAAAGCTGCCGACAGGAGTaGCAGCTGAGTTCAGTCACA +
Preference number: 4 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKSCRQE*QLSSVT
Trigger: TGTGACTGAACTCAGCTGGCACTCCTGTCGGCAGCT...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCAGGATTGTGGCCACTaGCTGGTAGAGGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYQDCGH*LVEELP
Trigger: CGGCAGCTCCTCTACCAGGCAGTGGCCACAATCCTG...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCCAGGATTGTGGCCACTaGCTGGTAGAGGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVQDCGH*LVEELP
Trigger: CGGCAGCTCCTCTACCAGGCAGTGGCCACAATCCTG...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCGGAGGGAGAGCACACTaGCAATACCCACTTCATGGA +
Preference number: 4 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSGGRAH*QYPLHG
Trigger: TCCATGAAGTGGGTATTGGCAGTGTGCTCTCCCTCC...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAATCCTTGATGCGGTGCTaGCAGAACTTCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKSLMRC*QNFWRE
Trigger: CTCCCTCCAGAAGTTCTGGCAGCACCGCATCAAGGA...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCGCAGTGAGTCGAAATTaGACCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIAVSRN*TIALQP
Trigger: AGGCTGGAGTGCAATGGTGCAATTTCGACTCACTGC...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGTGCAGGGGTGGGTCATaGACTTCCACCAGACGGAAC +
Preference number: 4 (lower is better)
Translates to: VLNVCWMNELNSHTATLWCRGGS*TSTRRN
Trigger: GTTCCGTCTGGTGGAAGTCCATGACCCACCCCTGCA...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGGGGCTTCGGCTTGTTaGCTGAGGGTTGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTGASAC*LRVGAG
Trigger: CCCTGCACCAACCCTCAGCCAACAAGCCGAAGCCCC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCAACCTCCAGGTTAGATaGGAAGCGTTCGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSNLQVR*EAFALS
Trigger: GCTCAGAGCGAACGCTTCCCATCTAACCTGGAGGTT...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCCTCTTCTTGCAGCGCTaGTTGAAAACAGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSLFLQR*LKTGED
Trigger: GTCCTCCCCTGTTTTCAACCAGCGCTGCAAGAAGAG...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGTAATCCCAGCACTTTaGGAGCCCGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVVIPAL*EPEAGR
Trigger: TCTGCCCGCCTCGGGCTCCCAAAGTGCTGGGATTAC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCCAGAAACCCTGGGGGTaGGCTGAGCAGTCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSQKPWG*AEQSVL
Trigger: TAAAACAGACTGCTCAGCCCACCCCCAGGGTTTCTG...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGGACCTCGAGAGGCCTaGGGCAAGGATCGCGTCAGA +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSGPREA*GKDRVR
Trigger: TCTGACGCGATCCTTGCCTCAGGCCTCTCGAGGTCC...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGGGGAGGTCTGGACCTaGACCGAGACAAGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTGEVWT*TETRRY
Trigger: GTACCTCCTTGTCTCGGTTCAGGTCCAGACCTCCCC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCTTCGGCTTGTTGGCTaGGGGTTGGTGCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSLRLVG*GLVQGW
Trigger: CCACCCCTGCACCAACCCTCAGCCAACAAGCCGAAG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGACAGGAGTGCCAGCTaGGTTCAGTCACAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVDRSAS*VQSQVP
Trigger: GGGAACCTGTGACTGAACTCAGCTGGCACTCCTGTC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGGGAAGCGTTCGCTCTaGGCCCCAAGCACTCCCATA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTGKRSL*APSTPI
Trigger: TATGGGAGTGCTTGGGGCTCAGAGCGAACGCTTCCC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCTCTTGCAGCGCTGGTTaGAAACAGGGGAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVSCSAG*KQGRTP
Trigger: TGGGGTCCTCCCCTGTTTTCAACCAGCGCTGCAAGA...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACACCTCTTATAACCTATaGACTCAGAAACCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHTSYNL*TQKPWG
Trigger: CCCCCAGGGTTTCTGAGTTCATAGGTTATAAGAGGT...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCCCCACGTGCACATACTaGCTAAATACAGAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSPTCTY*LNTELG
Trigger: GCCTAGCTCTGTATTTAGTCAGTATGTGCACGTGGG...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAACGGAGCCCAAGGAATaGCCAAGTCCCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTTEPKE*PSPSRG
Trigger: ACCCCTGGAGGGACTTGGGCATTCCTTGGGCTCCGT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCTTGGCTGAGGGTTGGTaGAGGGGTGGGTCATGGACT +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVLAEGW*RGGSWT
Trigger: AGTCCATGACCCACCCCTGCACCAACCCTCAGCCAA...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAAGGAGGGAGAGCACACTaGCAATACCCACTTCATGGA +
Preference number: 4 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKGGRAH*QYPLHG
Trigger: TCCATGAAGTGGGTATTGGCAGTGTGCTCTCCCTCC...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTACCTCGAAGACATCACTaGCCAGCACACCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLPRRHH*PAHHAQ
Trigger: CTGGGCATGGTGTGCTGGGCAGTGATGTCTTCGAGG...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCCCTCGAAGACATCACTaGCCAGCACACCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVPRRHH*PAHHAQ
Trigger: CTGGGCATGGTGTGCTGGGCAGTGATGTCTTCGAGG...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCAGTGGGAACCATAGCTaGTATCTGAGTCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSSGNHS*YLSHQG
Trigger: GCCCTGATGACTCAGATAGCAGCTATGGTTCCCACT...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGGGTTGGTGCAGGGGTaGGTCATGGACTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTGLVQG*VMDFHQ
Trigger: CTGGTGGAAGTCCATGACCCACCCCTGCACCAACCC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCTTGTTGGCTGAGGGTTaGTGCAGGGGTGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVLLAEG*CRGGSW
Trigger: CCATGACCCACCCCTGCACCAACCCTCAGCCAACAA...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACAGTCAAAGCCCGCGTaGGCCAGGATTGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTQSKPA*ARIVAT
Trigger: AGTGGCCACAATCCTGGCCCACGCGGGCTTTGACTG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCCAATCACAGGGTCCTaGGGTCGCCTGACGTTCAGG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSPITGS*GRLTFR
Trigger: CCTGAACGTCAGGCGACCTCAGGACCCTGTGATTGG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS-3UTR TCA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAAAACTGTGATAGTCCTTaGTGCGGTGCTGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKNCDSP*CGAART
Trigger: AGTTCTGGCAGCACCGCATCAAGGACTATCACAGTT...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCCACTCCCATAGGCAGTaGCTGGTCTCCAGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVHSHRQ*LVSRSK
Trigger: CTTGCTTCTGGAGACCAGTCACTGCCTATGGGAGTG...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGAGTCATCAGGGCTCTaGGGAATCCCAGCTTCACTC +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVESSGL*GIPASL
Trigger: GAGTGAAGCTGGGATTCCTCAGAGCCCTGATGACTC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATCTTGCAGCGCTGGTTaGAAACAGGGGAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTSCSAG*KQGRTP
Trigger: TGGGGTCCTCCCCTGTTTTCAACCAGCGCTGCAAGA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACACACACTATTCACTGCTaGGTCGCAGAGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTHTIHC*VAERAG
Trigger: CCCAGCCCGCTCTGCGACGCAGCAGTGAATAGTGTG...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCACACTATTCACTGCTaGGTCGCAGAGCGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSHTIHC*VAERAG
Trigger: CCCAGCCCGCTCTGCGACGCAGCAGTGAATAGTGTG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTACGGAGCCCAAGGAATaGCCAAGTCCCTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSTEPKE*PSPSRG
Trigger: ACCCCTGGAGGGACTTGGGCATTCCTTGGGCTCCGT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS-3UTR GCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAATTGGCTGAGGGTTGGTaGAGGGGTGGGTCATGGACT +
Preference number: 4 (lower is better)
Translates to: ITALINVCPASTFYSILKLAEGW*RGGSWT
Trigger: AGTCCATGACCCACCCCTGCACCAACCCTCAGCCAA...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATTGGCTGAGGGTTGGTaGAGGGGTGGGTCATGGACT +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTLAEGW*RGGSWT
Trigger: AGTCCATGACCCACCCCTGCACCAACCCTCAGCCAA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCCCGGATCTGGAATGGTaGATTGGGATTCTTACAATC +
Preference number: 4 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIPDLEW*IGILTI
Trigger: GATTGTAAGAATCCCAATGCACCATTCCAGATCCGG...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCAGCTGCCGACAGGAGTaGCAGCTGAGTTCAGTCACA +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVSCRQE*QLSSVT
Trigger: TGTGACTGAACTCAGCTGGCACTCCTGTCGGCAGCT...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCAGGATTGTGGCCACTaGCTGGTAGAGGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSQDCGH*LVEELP
Trigger: CGGCAGCTCCTCTACCAGGCAGTGGCCACAATCCTG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCGTGTGCTTAATGGACTaGTGTCCTCTGATGACCAAG +
Preference number: 4 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSVCLMD*CPLMTK
Trigger: CTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACTTCAGCAGTTTAACATaGTGGCATCCATCACCAAGG +
Preference number: 4 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHFSSLT*WHPSPR
Trigger: CCTTGGTGATGGATGCCAGCATGTTAAACTGCTGAA...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGGGTTGGTGCAGGGGTaGGTCATGGACTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSGLVQG*VMDFHQ
Trigger: CTGGTGGAAGTCCATGACCCACCCCTGCACCAACCC...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAATTGTTGGCTGAGGGTTaGTGCAGGGGTGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: ITALINVCPASTFYSILKLLAEG*CRGGSW
Trigger: CCATGACCCACCCCTGCACCAACCCTCAGCCAACAA...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATTGTTGGCTGAGGGTTaGTGCAGGGGTGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTLLAEG*CRGGSW
Trigger: CCATGACCCACCCCTGCACCAACCCTCAGCCAACAA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCAGTCAAAGCCCGCGTaGGCCAGGATTGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSQSKPA*ARIVAT
Trigger: AGTGGCCACAATCCTGGCCCACGCGGGCTTTGACTG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACCCAATACCCACTTCATaGAATACCTGCTCCATCACA +
Preference number: 4 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHPIPTS*NTCSIT
Trigger: TGTGATGGAGCAGGTATTCCATGAAGTGGGTATTGG...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTATGCTGCCAGAACTTCTaGAGGGAGAGCACACTGCCA +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLCCQNF*RESTLP
Trigger: TGGCAGTGTGCTCTCCCTCCAGAAGTTCTGGCAGCA...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCTGCTGCCAGAACTTCTaGAGGGAGAGCACACTGCCA +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVCCQNF*RESTLP
Trigger: TGGCAGTGTGCTCTCCCTCCAGAAGTTCTGGCAGCA...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACGCACAAGGCTGTCCTTaGACAGTACTTGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHAQGCP*TVLVCF
Trigger: AAAGCAAACAAGTACTGTCCAAGGACAGCCTTGTGC...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGTAATCCCAGCACTTTaGGAGCCCGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSVIPAL*EPEAGR
Trigger: TCTGCCCGCCTCGGGCTCCCAAAGTGCTGGGATTAC...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCTTTTCGCAAAGTCCGTaGATTTGGGTCAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSFSQSP*IWVRGT
Trigger: TGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAA...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGAGACTACATGGCTCTaGGGGGATGTCCAGCATAGT +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVETTWL*GDVQHS
Trigger: ACTATGCTGGACATCCCCTCAGAGCCATGTAGTCTC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACAGACAGGAGTGCCAGCTaGGTTCAGTCACAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTDRSAS*VQSQVP
Trigger: GGGAACCTGTGACTGAACTCAGCTGGCACTCCTGTC...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGACAGGAGTGCCAGCTaGGTTCAGTCACAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSDRSAS*VQSQVP
Trigger: GGGAACCTGTGACTGAACTCAGCTGGCACTCCTGTC...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGAGTCATCAGGGCTCTaGGGAATCCCAGCTTCACTC +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTESSGL*GIPASL
Trigger: GAGTGAAGCTGGGATTCCTCAGAGCCCTGATGACTC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTCTTGCAGCGCTGGTTaGAAACAGGGGAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSSCSAG*KQGRTP
Trigger: TGGGGTCCTCCCCTGTTTTCAACCAGCGCTGCAAGA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGTGCAACCTTGTTTGGTaGCGTCCAGTTCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VLNVCWMNELNSHTATLWCNLVW*RPVPLE
Trigger: TTCCAGAGGAACTGGACGTCACCAAACAAGGTTGCA...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGCCCACGTGCACATACTaGCTAAATACAGAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: VLNVCWMNELNSHTATLWPTCTY*LNTELG
Trigger: GCCTAGCTCTGTATTTAGTCAGTATGTGCACGTGGG...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACAACGCTCCAGGTCGTaGAGGAGCAACTTCACCATC +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTQRSRS*RSNFTI
Trigger: GATGGTGAAGTTGCTCCTTCACGACCTGGAGCGTTG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404798.6
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATACCACACTATTCACTaGTGCGTCGCAGAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTYHTIH*CVAERA
Trigger: AGCCCGCTCTGCGACGCAGCAGTGAATAGTGTGGTA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACTCTCTGGGTCACTGTaGCGGATCTGGAATGGTGCA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTLSGSL*RIWNGA
Trigger: TGCACCATTCCAGATCCGGCACAGTGACCCAGAGAG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAAGCTGCCGACAGGAGTaGCAGCTGAGTTCAGTCACA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTSCRQE*QLSSVT
Trigger: TGTGACTGAACTCAGCTGGCACTCCTGTCGGCAGCT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGGAGGGAGAGCACACTaGCAATACCCACTTCATGGA +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVGGRAH*QYPLHG
Trigger: TCCATGAAGTGGGTATTGGCAGTGTGCTCTCCCTCC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATCCTTGATGCGGTGCTaGCAGAACTTCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTSLMRC*QNFWRE
Trigger: CTCCCTCCAGAAGTTCTGGCAGCACCGCATCAAGGA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCCTCGAAGACATCACTaGCCAGCACACCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSPRRHH*PAHHAQ
Trigger: CTGGGCATGGTGTGCTGGGCAGTGATGTCTTCGAGG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCCAGACGGAACTCCCGTaGGAGCAAATCGAAGGAACT +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVQTELP*EQIEGT
Trigger: AGTTCCTTCGATTTGCTCCCACGGGAGTTCCGTCTG...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTGCAGGGGTGGGTCATaGACTTCCACCAGACGGAAC +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSCRGGS*TSTRRN
Trigger: GTTCCGTCTGGTGGAAGTCCATGACCCACCCCTGCA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAAATAAAAGTCACTCTCTaGGTCACTGTGCCGGATCTG +
Preference number: 4 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKIKVTL*VTVPDL
Trigger: CAGATCCGGCACAGTGACCCAGAGAGTGACTTTTAT...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATGCTGCCAGAACTTCTaGAGGGAGAGCACACTGCCA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTCCQNF*RESTLP
Trigger: TGGCAGTGTGCTCTCCCTCCAGAAGTTCTGGCAGCA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCCCCATAGGCAGTGACTaGTCTCCAGAAGCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVPIGSD*SPEARS
Trigger: TGACCTTGCTTCTGGAGACCAGTCACTGCCTATGGG...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAAACCTCCAGGTTAGATaGGAAGCGTTCGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLNLQVR*EAFALS
Trigger: GCTCAGAGCGAACGCTTCCCATCTAACCTGGAGGTT...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCCTCTTCTTGCAGCGCTaGTTGAAAACAGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVLFLQR*LKTGED
Trigger: GTCCTCCCCTGTTTTCAACCAGCGCTGCAAGAAGAG...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCTTGGGGACAGTGCTTTaGTCTGATTGCCATGCCAGC +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVLGTVL*SDCHAS
Trigger: GCTGGCATGGCAATCAGACCAAAGCACTGTCCCCAA...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
3UTR CAA 72 bp AAAGTCTCCTTGGTGATTTTCGCAAAGTCCGTGGATTaGGGTCAGAGGCACATTTCATACATAACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: KVSLVIFAKSVD*GQRHISYITAL
Trigger: AAGGGCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATCACCAAGGAGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGAATCGTATGGATGGTaGGACTACATGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVESYGW*DYMALR
Trigger: CCTCAGAGCCATGTAGTCTCACCATCCATACGATTC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCAACTGTGATAGTCCTTaGTGCGGTGCTGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVNCDSP*CGAART
Trigger: AGTTCTGGCAGCACCGCATCAAGGACTATCACAGTT...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCACTCCCATAGGCAGTaGCTGGTCTCCAGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSHSHRQ*LVSRSK
Trigger: CTTGCTTCTGGAGACCAGTCACTGCCTATGGGAGTG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAAGCTTCACTCATGCCTaGCATAGGCTCCTCGAAGAC +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTSFTHA*HRLLED
Trigger: GTCTTCGAGGAGCCTATGTCAGGCATGAGTGAAGCT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGAGTCATCAGGGCTCTaGGGAATCCCAGCTTCACTC +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSESSGL*GIPASL
Trigger: GAGTGAAGCTGGGATTCCTCAGAGCCCTGATGACTC...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAACCATAGCTGCTATCTaGGTCATCAGGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTTIAAI*VIRALR
Trigger: CCTCAGAGCCCTGATGACTCAGATAGCAGCTATGGT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTACCACACTATTCACTaGTGCGTCGCAGAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSYHTIH*CVAERA
Trigger: AGCCCGCTCTGCGACGCAGCAGTGAATAGTGTGGTA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCTCTCTGGGTCACTGTaGCGGATCTGGAATGGTGCA +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSLSGSL*RIWNGA
Trigger: TGCACCATTCCAGATCCGGCACAGTGACCCAGAGAG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTAGCTGCCGACAGGAGTaGCAGCTGAGTTCAGTCACA +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSSCRQE*QLSSVT
Trigger: TGTGACTGAACTCAGCTGGCACTCCTGTCGGCAGCT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCACTTCATGGAATACCTaGTCCATCACATCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSITSWNT*SITSGK
Trigger: TTTTCCTGATGTGATGGAGCAGGTATTCCATGAAGT...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATCCTTGATGCGGTGCTaGCAGAACTTCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTSLMRC*QNFWRE
Trigger: CTCCCTCCAGAAGTTCTGGCAGCACCGCATCAAGGA...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTCCTTGATGCGGTGCTaGCAGAACTTCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSSLMRC*QNFWRE
Trigger: CTCCCTCCAGAAGTTCTGGCAGCACCGCATCAAGGA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAAGTGGGAACCATAGCTaGTATCTGAGTCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLSGNHS*YLSHQG
Trigger: GCCCTGATGACTCAGATAGCAGCTATGGTTCCCACT...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCAGTGGGAACCATAGCTaGTATCTGAGTCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVSGNHS*YLSHQG
Trigger: GCCCTGATGACTCAGATAGCAGCTATGGTTCCCACT...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAGCAGTGAGTCGAAATTaGACCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLAVSRN*TIALQP
Trigger: AGGCTGGAGTGCAATGGTGCAATTTCGACTCACTGC...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACGAACTTCTGTTGGTCTaGCTTGATGATATTGGTATC +
Preference number: 4 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHELLLV*LDDIGI
Trigger: GATACCAATATCATCAAGCCAGACCAACAGAAGTTC...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACAGACGGAACTCCCGTaGGAGCAAATCGAAGGAACT +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTQTELP*EQIEGT
Trigger: AGTTCCTTCGATTTGCTCCCACGGGAGTTCCGTCTG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCTCACTGTGCCGGATCTaGAATGGTGCATTGGGATTC +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVSLCRI*NGALGF
Trigger: GAATCCCAATGCACCATTCCAGATCCGGCACAGTGA...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATGCTGCCAGAACTTCTaGAGGGAGAGCACACTGCCA +
Preference number: 4 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTCCQNF*RESTLP
Trigger: TGGCAGTGTGCTCTCCCTCCAGAAGTTCTGGCAGCA...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAACCCATAGGCAGTGACTaGTCTCCAGAAGCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ITALINVCPASTFYSILKPIGSD*SPEARS
Trigger: TGACCTTGCTTCTGGAGACCAGTCACTGCCTATGGG...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACCCATAGGCAGTGACTaGTCTCCAGAAGCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTPIGSD*SPEARS
Trigger: TGACCTTGCTTCTGGAGACCAGTCACTGCCTATGGG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAAACCTCCAGGTTAGATaGGAAGCGTTCGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTNLQVR*EAFALS
Trigger: GCTCAGAGCGAACGCTTCCCATCTAACCTGGAGGTT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAACTCTTCTTGCAGCGCTaGTTGAAAACAGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: ITALINVCPASTFYSILKLFLQR*LKTGED
Trigger: GTCCTCCCCTGTTTTCAACCAGCGCTGCAAGAAGAG...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAATTGGGGACAGTGCTTTaGTCTGATTGCCATGCCAGC +
Preference number: 4 (lower is better)
Translates to: ITALINVCPASTFYSILKLGTVL*SDCHAS
Trigger: GCTGGCATGGCAATCAGACCAAAGCACTGTCCCCAA...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAACAAAGTCCGTGGATTTaGGTCAGAGGCACATTTCAT +
Preference number: 4 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKQSPWI*VRGTFH
Trigger: ATGAAATGTGCCTCTGACCCAAATCCACGGACTTTG...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGAGACTACATGGCTCTaGGGGGATGTCCAGCATAGT +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSETTWL*GDVQHS
Trigger: ACTATGCTGGACATCCCCTCAGAGCCATGTAGTCTC...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAAGAATCGTATGGATGGTaGGACTACATGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: ITALINVCPASTFYSILKESYGW*DYMALR
Trigger: CCTCAGAGCCATGTAGTCTCACCATCCATACGATTC...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAAACTGTGATAGTCCTTaGTGCGGTGCTGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTNCDSP*CGAART
Trigger: AGTTCTGGCAGCACCGCATCAAGGACTATCACAGTT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACAAGCTTCACTCATGCCTaGCATAGGCTCCTCGAAGAC +
Preference number: 4 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTSFTHA*HRLLED
Trigger: GTCTTCGAGGAGCCTATGTCAGGCATGAGTGAAGCT...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTAGCTTCACTCATGCCTaGCATAGGCTCCTCGAAGAC +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSSFTHA*HRLLED
Trigger: GTCTTCGAGGAGCCTATGTCAGGCATGAGTGAAGCT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACAACCATAGCTGCTATCTaGGTCATCAGGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTTIAAI*VIRALR
Trigger: CCTCAGAGCCCTGATGACTCAGATAGCAGCTATGGT...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTACCATAGCTGCTATCTaGGTCATCAGGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSTIAAI*VIRALR
Trigger: CCTCAGAGCCCTGATGACTCAGATAGCAGCTATGGT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCATGTTGTTCAGGACATaGTGTAAAGTTGAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSMLFRT*CKVERC
Trigger: GCACCTTTCAACTTTACATCATGTCCTGAACAACAT...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAAATGCATAGTAGCCTATaGCATAATTCCAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKMHSSL*HNSRPG
Trigger: ACCTGGTCTGGAATTATGTCATAGGCTACTATGCAT...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAAGTGGGAACCATAGCTaGTATCTGAGTCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTSGNHS*YLSHQG
Trigger: GCCCTGATGACTCAGATAGCAGCTATGGTTCCCACT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACAGTACTTGTTTGCTTTaGTCACAAAGGAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHSTCLL*SQRRKG
Trigger: TCCTTTTCTCCTTTGTGAGCAAAGCAAACAAGTACT...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGTGTGCTTAATGGACTaGTGTCCTCTGATGACCAAG +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVVCLMD*CPLMTK
Trigger: CTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGGCCCTTATAAACGTTTaGCCTGCCTCCACATTTTAC +
Preference number: 4 (lower is better)
Translates to: VLNVCWMNELNSHTATLWALINV*PASTFY
Trigger: GTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGC...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCAGACGGAACTCCCGTaGGAGCAAATCGAAGGAACT +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSQTELP*EQIEGT
Trigger: AGTTCCTTCGATTTGCTCCCACGGGAGTTCCGTCTG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAGTGCCGGATCTGGAATaGTGCATTGGGATTCTTACA +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLVPDLE*CIGILT
Trigger: TGTAAGAATCCCAATGCACCATTCCAGATCCGGCAC...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGTGCCGGATCTGGAATaGTGCATTGGGATTCTTACA +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVVPDLE*CIGILT
Trigger: TGTAAGAATCCCAATGCACCATTCCAGATCCGGCAC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATCACTGTGCCGGATCTaGAATGGTGCATTGGGATTC +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTSLCRI*NGALGF
Trigger: GAATCCCAATGCACCATTCCAGATCCGGCACAGTGA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCCCATAGGCAGTGACTaGTCTCCAGAAGCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSPIGSD*SPEARS
Trigger: TGACCTTGCTTCTGGAGACCAGTCACTGCCTATGGG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTAACCTCCAGGTTAGATaGGAAGCGTTCGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSNLQVR*EAFALS
Trigger: GCTCAGAGCGAACGCTTCCCATCTAACCTGGAGGTT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCTCTTCTTGCAGCGCTaGTTGAAAACAGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSLFLQR*LKTGED
Trigger: GTCCTCCCCTGTTTTCAACCAGCGCTGCAAGAAGAG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCTTTATCTGTGAAGGGTaGCTTGGTTGTGGAAAACTA +
Preference number: 4 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSFICEG*LGCGKL
Trigger: TAGTTTTCCACAACCAAGCCACCCTTCACAGATAAA...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTTGGGGACAGTGCTTTaGTCTGATTGCCATGCCAGC +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSLGTVL*SDCHAS
Trigger: GCTGGCATGGCAATCAGACCAAAGCACTGTCCCCAA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATTTTTCGCAAAGTCCGTaGATTTGGGTCAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYFSQSP*IWVRGT
Trigger: TGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAA...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR CAA 72 bp GCAAATGCAACAAATGAAATATGCACAAGGCTGTCCTaGGACAGTACTTGTTTGCTTTGCTCACAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: ANATNEICTRLS*DSTCLLCSQRR
Trigger: TCTCCTTTGTGAGCAAAGCAAACAAGTACTGTCCAAGGACAGCCTTGTGCATATTTCATTTGTTGCATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGAATCGTATGGATGGTaGGACTACATGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSESYGW*DYMALR
Trigger: CCTCAGAGCCATGTAGTCTCACCATCCATACGATTC...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTAACTGTGATAGTCCTTaGTGCGGTGCTGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSNCDSP*CGAART
Trigger: AGTTCTGGCAGCACCGCATCAAGGACTATCACAGTT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAATGGCCTTCTCAGGATTaGCAATCCTTTCATATTCTT +
Preference number: 4 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKWPSQD*QSFHIL
Trigger: AAGAATATGAAAGGATTGTCAATCCTGAGAAGGCCA...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAAACCTCTTATAACCTATaGACTCAGAAACCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ITALINVCPASTFYSILKTSYNL*TQKPWG
Trigger: CCCCCAGGGTTTCTGAGTTCATAGGTTATAAGAGGT...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCAAAGTCTCCTTGGTaGTTTTCGCAAAGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSAKSPW*FSQSPW
Trigger: CCACGGACTTTGCGAAAATCACCAAGGAGACTTTGC...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTAGTGGGAACCATAGCTaGTATCTGAGTCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSSGNHS*YLSHQG
Trigger: GCCCTGATGACTCAGATAGCAGCTATGGTTCCCACT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGGTGCTTTGGTCTGATTaGCATGCCAGCATCATATTT +
Preference number: 4 (lower is better)
Translates to: VLNVCWMNELNSHTATLWVLWSD*HASIIF
Trigger: AAATATGATGCTGGCATGGCAATCAGACCAAAGCAC...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCAACAATTGGGGACAGTaGTTTGGTCTGATTGCCATG +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVNNWGQ*FGLIAM
Trigger: CATGGCAATCAGACCAAAGCACTGTCCCCAATTGTT...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGTGAGAGATTTCTGCTaGCTTCTAACTGGTATCCCT +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVVRDFC*LLTGIP
Trigger: AGGGATACCAGTTAGAAGGCAGCAGAAATCTCTCAC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGTGCCGGATCTGGAATaGTGCATTGGGATTCTTACA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTVPDLE*CIGILT
Trigger: TGTAAGAATCCCAATGCACCATTCCAGATCCGGCAC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTCACTGTGCCGGATCTaGAATGGTGCATTGGGATTC +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSSLCRI*NGALGF
Trigger: GAATCCCAATGCACCATTCCAGATCCGGCACAGTGA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAATAAAAGTCACTCTCTaGGTCACTGTGCCGGATCTG +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTIKVTL*VTVPDL
Trigger: CAGATCCGGCACAGTGACCCAGAGAGTGACTTTTAT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAGCACAAGGCTGTCCTTaGACAGTACTTGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLAQGCP*TVLVCF
Trigger: AAAGCAAACAAGTACTGTCCAAGGACAGCCTTGTGC...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATAGCAGTTTAACATGCTaGCATCCATCACCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYSSLTC*HPSPRH
Trigger: ATGCCTTGGTGATGGATGCCAGCATGTTAAACTGCT...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACTGCTGCCTTCTAACTaGTATCCCTTCCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTLLPSN*YPFLQS
Trigger: AGATTGGAGGAAGGGATACCAGTTAGAAGGCAGCAG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGGGTTCCCAATGACCTaGGCCAAAAATGAATCAAGT +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTGFPMT*AKNESS
Trigger: ACTTGATTCATTTTTGGCTCAGGTCATTGGGAACCC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATTCCATCACCAAGGCATaGAGCAACACATTTGCTAAT +
Preference number: 4 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYSITKA*SNTFAN
Trigger: ATTAGCAAATGTGTTGCTTCATGCCTTGGTGATGGA...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTATGTTTGCTGGATGAATaGACTAAATTCCCATACGGC +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLCLLDE*TKFPYG
Trigger: GCCGTATGGGAATTTAGTTCATTCATCCAGCAAACA...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAATATTTCCCTCGTCTTaGCCATCTGGTGCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTIFPSS*PSGACY
Trigger: ATAACAGGCACCAGATGGTCAAGACGAGGGAAATAT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATATGCATAGTAGCCTATaGCATAATTCCAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYMHSSL*HNSRPG
Trigger: ACCTGGTCTGGAATTATGTCATAGGCTACTATGCAT...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACCGGATCTGGAATGGTaGATTGGGATTCTTACAATC +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTPDLEW*IGILTI
Trigger: GATTGTAAGAATCCCAATGCACCATTCCAGATCCGG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGTGCTTTGGTCTGATTaGCATGCCAGCATCATATTT +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVVLWSD*HASIIF
Trigger: AAATATGATGCTGGCATGGCAATCAGACCAAAGCAC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAAACAATTGGGGACAGTaGTTTGGTCTGATTGCCATG +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTNNWGQ*FGLIAM
Trigger: CATGGCAATCAGACCAAAGCACTGTCCCCAATTGTT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAAAGAAGCAGCAAAGTGTaGTTAATGGACTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ITALINVCPASTFYSILKRSSKV*LMDCCP
Trigger: AGGACAGCAGTCCATTAAGCACACTTTGCTGCTTCT...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATTCAGCAGTTTAACATaGTGGCATCCATCACCAAGG +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTFSSLT*WHPSPR
Trigger: CCTTGGTGATGGATGCCAGCATGTTAAACTGCTGAA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAGTCTTGACCATCTGGTaGCTGTTATGCAGTTTAACA +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLVLTIW*LLCSLT
Trigger: TGTTAAACTGCATAACAGGCACCAGATGGTCAAGAC...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGTGAGAGATTTCTGCTaGCTTCTAACTGGTATCCCT +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTVRDFC*LLTGIP
Trigger: AGGGATACCAGTTAGAAGGCAGCAGAAATCTCTCAC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCTCCCCTTTCCCACTTTaGAGATTCATTGTCCATATG +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVSPFPL*RFIVHM
Trigger: CATATGGACAATGAATCTGCAAAGTGGGAAAGGGGA...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404798.6
CDS-3UTR CCA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAATCTGGAATGGTGCATTaGGATTCTTACAATCTAAAG +
Preference number: 4 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKSGMVH*DSYNLK
Trigger: CTTTAGATTGTAAGAATCCCAATGCACCATTCCAGA...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTATAAAAGTCACTCTCTaGGTCACTGTGCCGGATCTG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSIKVTL*VTVPDL
Trigger: CAGATCCGGCACAGTGACCCAGAGAGTGACTTTTAT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACCAATACCCACTTCATaGAATACCTGCTCCATCACA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTPIPTS*NTCSIT
Trigger: TGTGATGGAGCAGGTATTCCATGAAGTGGGTATTGG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCAGCTGTGCCTTATTTTaGTCTGCATTAAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVSCALF*SALKEW
Trigger: CCACTCCTTTAATGCAGACCAAAATAAGGCACAGCT...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAACTCGTCTTGACCATCTaGTGCCTGTTATGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: ITALINVCPASTFYSILKLVLTI*CLLCSL
Trigger: TAAACTGCATAACAGGCACCAGATGGTCAAGACGAG...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAACAAAGTCCGTGGATTTaGGTCAGAGGCACATTTCAT +
Preference number: 4 (lower is better)
Translates to: ITALINVCPASTFYSILKQSPWI*VRGTFH
Trigger: ATGAAATGTGCCTCTGACCCAAATCCACGGACTTTG...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCTGCTGCCTTCTAACTaGTATCCCTTCCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSLLPSN*YPFLQS
Trigger: AGATTGGAGGAAGGGATACCAGTTAGAAGGCAGCAG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCTGGCCTTCTCAGGATTaGCAATCCTTTCATATTCTT +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVWPSQD*QSFHIL
Trigger: AAGAATATGAAAGGATTGTCAATCCTGAGAAGGCCA...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAAGTAATGGGTTCCCAATaGCCTGAGCCAAAAATGAAT +
Preference number: 4 (lower is better)
Translates to: ITALINVCPASTFYSILKVMGSQ*PEPKMN
Trigger: ATTCATTTTTGGCTCAGGTCATTGGGAACCCATTAC...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATATGTTGTTCAGGACATaGTGTAAAGTTGAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYMLFRT*CKVERC
Trigger: GCACCTTTCAACTTTACATCATGTCCTGAACAACAT...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACAATATTTCCCTCGTCTTaGCCATCTGGTGCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTIFPSS*PSGACY
Trigger: ATAACAGGCACCAGATGGTCAAGACGAGGGAAATAT...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCCGGATCTGGAATGGTaGATTGGGATTCTTACAATC +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSPDLEW*IGILTI
Trigger: GATTGTAAGAATCCCAATGCACCATTCCAGATCCGG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACAAACAATTGGGGACAGTaGTTTGGTCTGATTGCCATG +
Preference number: 4 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTNNWGQ*FGLIAM
Trigger: CATGGCAATCAGACCAAAGCACTGTCCCCAATTGTT...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTAACAATTGGGGACAGTaGTTTGGTCTGATTGCCATG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSNNWGQ*FGLIAM
Trigger: CATGGCAATCAGACCAAAGCACTGTCCCCAATTGTT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACAAGAAGCAGCAAAGTGTaGTTAATGGACTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTRSSKV*LMDCCP
Trigger: AGGACAGCAGTCCATTAAGCACACTTTGCTGCTTCT...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGTCTTGACCATCTGGTaGCTGTTATGCAGTTTAACA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTVLTIW*LLCSLT
Trigger: TGTTAAACTGCATAACAGGCACCAGATGGTCAAGAC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAAACGTGAGAGATTTCTaGTGCCTTCTAACTGGTATC +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTNVRDF*CLLTGI
Trigger: GATACCAGTTAGAAGGCAGCAGAAATCTCTCACGTT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGAACTTCTGTTGGTCTaGCTTGATGATATTGGTATC +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVELLLV*LDDIGI
Trigger: GATACCAATATCATCAAGCCAGACCAACAGAAGTTC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCCAATACCCACTTCATaGAATACCTGCTCCATCACA +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSPIPTS*NTCSIT
Trigger: TGTGATGGAGCAGGTATTCCATGAAGTGGGTATTGG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTAGCAGTTTAACATGCTaGCATCCATCACCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSSSLTC*HPSPRH
Trigger: ATGCCTTGGTGATGGATGCCAGCATGTTAAACTGCT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAAAGCTGTGCCTTATTTTaGTCTGCATTAAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ITALINVCPASTFYSILKSCALF*SALKEW
Trigger: CCACTCCTTTAATGCAGACCAAAATAAGGCACAGCT...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCCTTAGTGGGAACCACTaGTCTCAAAATTTGAAGCTA +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVLSGNH*SQNLKL
Trigger: TAGCTTCAAATTTTGAGACCAGTGGTTCCCACTAAG...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACACTCGTCTTGACCATCTaGTGCCTGTTATGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTLVLTI*CLLCSL
Trigger: TAAACTGCATAACAGGCACCAGATGGTCAAGACGAG...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR CAA 72 bp GAGGCACATTTCATACATAACAGCCCTTATAAACGTTaGCCCTGCCTCCACATTTTACAGTATCTTAAAACA +
Preference number: 4 (lower is better)
Translates to: EAHFIHNSPYKR*PCLHILQYLKT
Trigger: TGTTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATGGCCTTCTCAGGATTaGCAATCCTTTCATATTCTT +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTWPSQD*QSFHIL
Trigger: AAGAATATGAAAGGATTGTCAATCCTGAGAAGGCCA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATATGGTGAAAGTATGTaGGTCCGAGCAGAAATAACA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTYGESM*VRAEIT
Trigger: TGTTATTTCTGCTCGGACTCACATACTTTCACCATA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTCCATCACCAAGGCATaGAGCAACACATTTGCTAAT +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSSITKA*SNTFAN
Trigger: ATTAGCAAATGTGTTGCTTCATGCCTTGGTGATGGA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR TCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACATGATAAGGTATCTTaGTACATCTGTGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTHDKVS*YICAGS
Trigger: TGATCCAGCACAGATGTATCAAGATACCTTATCATG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAGTTTTTCTCATATTATaGCCTTCTCATGTTAGCACC +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLVFLIL*PSHVST
Trigger: GGTGCTAACATGAGAAGGTCATAATATGAGAAAAAC...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404798.6
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAACTTCATGGAATACCTaGTCCATCACATCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTTSWNT*SITSGK
Trigger: TTTTCCTGATGTGATGGAGCAGGTATTCCATGAAGT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACAGTGCTTTGGTCTGATTaGCATGCCAGCATCATATTT +
Preference number: 4 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTVLWSD*HASIIF
Trigger: AAATATGATGCTGGCATGGCAATCAGACCAAAGCAC...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGTGCTTTGGTCTGATTaGCATGCCAGCATCATATTT +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSVLWSD*HASIIF
Trigger: AAATATGATGCTGGCATGGCAATCAGACCAAAGCAC...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTATTGAAAGGTGCATATTaGTATGTTTTAAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLLKGAY*YVLKAA
Trigger: GGCAGCCTTTAAAACATAGCAATATGCACCTTTCAA...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGTTTATGGAAACTAACTaGCTAATCGCCACTTTCATT +
Preference number: 4 (lower is better)
Translates to: VLNVCWMNELNSHTATLWFMETN*LIATFI
Trigger: AATGAAAGTGGCGATTAGGCAGTTAGTTTCCATAAA...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGTTTCAACTCACCTTTaGAGATTCATTGTCCATATG +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVVSTHL*RFIVHM
Trigger: CATATGGACAATGAATCTGCAAAGGTGAGTTGAAAC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGAACTTCTGTTGGTCTaGCTTGATGATATTGGTATC +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTELLLV*LDDIGI
Trigger: GATACCAATATCATCAAGCCAGACCAACAGAAGTTC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAATTTATCTGTGAAGGGTaGCTTGGTTGTGGAAAACTA +
Preference number: 4 (lower is better)
Translates to: ITALINVCPASTFYSILKFICEG*LGCGKL
Trigger: TAGTTTTCCACAACCAAGCCACCCTTCACAGATAAA...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTAGCTACAACAGCATCTaGAGCTCTAGTATCCCTATT +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSSYNSI*SSSIPI
Trigger: AATAGGGATACTAGAGCTCCAGATGCTGTTGTAGCT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTGGCCTTCTCAGGATTaGCAATCCTTTCATATTCTT +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSWPSQD*QSFHIL
Trigger: AAGAATATGAAAGGATTGTCAATCCTGAGAAGGCCA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR TCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCATGATAAGGTATCTTaGTACATCTGTGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSHDKVS*YICAGS
Trigger: TGATCCAGCACAGATGTATCAAGATACCTTATCATG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATCTCCCCAGTATCTTTaGAGATTCATTGTCCATATG +
Preference number: 4 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTSPQYL*RFIVHM
Trigger: CATATGGACAATGAATCTGCAAAGATACTGGGGAGA...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR GCA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACAACTTCATGGAATACCTaGTCCATCACATCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTTSWNT*SITSGK
Trigger: TTTTCCTGATGTGATGGAGCAGGTATTCCATGAAGT...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTACTTCATGGAATACCTaGTCCATCACATCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSTSWNT*SITSGK
Trigger: TTTTCCTGATGTGATGGAGCAGGTATTCCATGAAGT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTATTTATGGAAACTAACTaGCTAATCGCCACTTTCATT +
Preference number: 4 (lower is better)
Translates to: HILTKYRARPSLYCTLNLFMETN*LIATFI
Trigger: AATGAAAGTGGCGATTAGGCAGTTAGTTTCCATAAA...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTAATCCTCACATCATTTaGCTTCTCATATTTCCCTCG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSNPHII*LLIFPS
Trigger: CGAGGGAAATATGAGAAGGCAAATGATGTGAGGATT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATATAAACGTTTGCCCTaGCTCCACATTTTACAGTAT +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTYKRLP*LHILQY
Trigger: ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAATATAAACGTTTGCCCTaGCTCCACATTTTACAGTAT +
Preference number: 4 (lower is better)
Translates to: ITALINVCPASTFYSILKYKRLP*LHILQY
Trigger: ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATA...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCAAATGGCTTCCCATTaGCTATTGGAAAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSQMASH*LLEKVR
Trigger: TCTGACTTTTTCCAATAGGCAATGGGAAGCCATTTG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCATCTTGATACATCTGTaGTGGATCAATAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVILIHL*WINRRK
Trigger: TTTTCTCCTATTGATCCAGCACAGATGTATCAAGAT...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTAAGGTGTTCTCCCTTTaGAGATTCATTGTCCATATG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSKVFSL*RFIVHM
Trigger: CATATGGACAATGAATCTGCAAAGGGAGAACACCTT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405491.5
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATCTGGAATGGTGCATTaGGATTCTTACAATCTAAAG +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTSGMVH*DSYNLK
Trigger: CTTTAGATTGTAAGAATCCCAATGCACCATTCCAGA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCACAAAATTCACAATCTaGTTTCAACTCACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVTKFTI*FQLTFA
Trigger: TGCAAAGGTGAGTTGAAACCAGATTGTGAATTTTGT...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGTAACTGTTAGATGCTaGTTATTGTCATACTATGAC +
Preference number: 4 (lower is better)
Translates to: CITCLVIVKTTIGDSALVVTVRC*LLSYYD
Trigger: GTCATAGTATGACAATAACCAGCATCTAACAGTTAC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTAGTACTTGTTTGCTTTaGTCACAAAGGAGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSSTCLL*SQRRKG
Trigger: TCCTTTTCTCCTTTGTGAGCAAAGCAAACAAGTACT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTTGAAAGGTGCATATTaGTATGTTTTAAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSLKGAY*YVLKAA
Trigger: GGCAGCCTTTAAAACATAGCAATATGCACCTTTCAA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR GCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGTTTCAACTCACCTTTaGAGATTCATTGTCCATATG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSVSTHL*RFIVHM
Trigger: CATATGGACAATGAATCTGCAAAGGTGAGTTGAAAC...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR GCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAATCTTGATACATCTGTaGTGGATCAATAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTILIHL*WINRRK
Trigger: TTTTCTCCTATTGATCCAGCACAGATGTATCAAGAT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTCTGGAATGGTGCATTaGGATTCTTACAATCTAAAG +
Preference number: 4 (lower is better)
Translates to: INGCITCLVIVKTTIGDSSGMVH*DSYNLK
Trigger: CTTTAGATTGTAAGAATCCCAATGCACCATTCCAGA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAACAAAATTCACAATCTaGTTTCAACTCACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTTKFTI*FQLTFA
Trigger: TGCAAAGGTGAGTTGAAACCAGATTGTGAATTTTGT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CCA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGTAACTGTTAGATGCTaGTTATTGTCATACTATGAC +
Preference number: 4 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTVTVRC*LLSYYD
Trigger: GTCATAGTATGACAATAACCAGCATCTAACAGTTAC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
3UTR CAA 72 bp GTACTTTTGAATGCTTTATCTTCCTTACAGAATAACTaGTCTTCCTTATGCTTCAAGCTCCAAAAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: VLLNALSSLQNN*SSLCFKLQKGK
Trigger: CTTACCCTTTTGGAGCTTGAAGCATAAGGAAGACAAGTTATTCTGTAAGGAAGATAAAGCATTCAAAAGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
3UTR CAA 72 bp TGTTCTATACTTAGTGGGAACCACTGGTCTCAAAATTaGAAGCTATTCTTTAAGAGGAGAACATTCGCAAAA +
Preference number: 4 (lower is better)
Translates to: CSILSGNHWSQN*KLFFKRRTFAK
Trigger: TTTTGCGAATGTTCTCCTCTTAAAGAATAGCTTCAAATTTTGAGACCAGTGGTTCCCACTAAGTATAGAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS TCA 90 bp TTCCTCGGTCACGGTCCGCCGGCGCAGGCGCCAATCACAGGGTCCTaGGGTCGCCTGACGTTCAGGGCAGCCGGAAGACGGGGAGGTCTG +
Preference number: 5 (lower is better)
Translates to: FLGHGPPAQAPITGS*GRLTFRAAGRRGGL
Trigger: CAGACCTCCCCGTCTTCCGGCTGCCCTGAACGTCAGGCGACCTCAGGACCCTGTGATTGGCGCCTGCGCCGGCGGACCGTGACCGAGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS GCA 90 bp CCTTGCCCGAAAGGAGCACGAAGAACAGGCACGGAGCCCAAGGAATaGCCAAGTCCCTCCAGGGGTTTCCTCGGTCACGGTCCGCCGGCG +
Preference number: 5 (lower is better)
Translates to: PCPKGARRTGTEPKE*PSPSRGFLGHGPPA
Trigger: CGCCGGCGGACCGTGACCGAGGAAACCCCTGGAGGGACTTGGGCATTCCTTGGGCTCCGTGCCTGTTCTTCGTGCTCCTTTCGGGCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS CCA 90 bp CCACACTATTCACTGCTGCGTCGCAGAGCGGGCTGGGCGGCTGTCTaGACCTCGAGAGGCCTGAGGCAAGGATCGCGTCAGACCCCGAAA +
Preference number: 5 (lower is better)
Translates to: PHYSLLRRRAGWAAV*TSRGLRQGSRQTPK
Trigger: TTTCGGGGTCTGACGCGATCCTTGCCTCAGGCCTCTCGAGGTCCAGACAGCCGCCCAGCCCGCTCTGCGACGCAGCAGTGAATAGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS CCA 90 bp GACAAGGAGGTACCACACTATTCACTGCTGCGTCGCAGAGCGGGCTaGGCGGCTGTCTGGACCTCGAGAGGCCTGAGGCAAGGATCGCGT +
Preference number: 5 (lower is better)
Translates to: DKEVPHYSLLRRRAG*AAVWTSRGLRQGSR
Trigger: ACGCGATCCTTGCCTCAGGCCTCTCGAGGTCCAGACAGCCGCCCAGCCCGCTCTGCGACGCAGCAGTGAATAGTGTGGTACCTCCTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS GCA 90 bp CTCATTAGCACAGTCAAAGCCCGCGTGGGCCAGGATTGTGGCCACTaGCTGGTAGAGGAGCTGCCGACAGGAGTGCCAGCTGAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: LISTVKARVGQDCGH*LVEELPTGVPAEFS
Trigger: ACTGAACTCAGCTGGCACTCCTGTCGGCAGCTCCTCTACCAGGCAGTGGCCACAATCCTGGCCCACGCGGGCTTTGACTGTGCTAATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS TCA 90 bp TGTGGTGAAGCTTCAACCTCCAGGTTAGATGGGAAGCGTTCGCTCTaGGCCCCAAGCACTCCCATAGGCAGTGACTGGTCTCCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: CGEASTSRLDGKRSL*APSTPIGSDWSPEA
Trigger: TGCTTCTGGAGACCAGTCACTGCCTATGGGAGTGCTTGGGGCTCAGAGCGAACGCTTCCCATCTAACCTGGAGGTTGAAGCTTCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS GCA 90 bp TTCTGGAGGGAGAGCACACTGCCAATACCCACTTCATGGAATACCTaGTCCATCACATCAGGAAAAGGAGTCTGTCCCAGCCGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: FWRESTLPIPTSWNT*SITSGKGVCPSRAS
Trigger: GGAGGCCCGGCTGGGACAGACTCCTTTTCCTGATGTGATGGAGCAGGTATTCCATGAAGTGGGTATTGGCAGTGTGCTCTCCCTCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS TCA 90 bp TTTATCAAATGCCAGGCATTCTGTGTCGGTCAAAGACTGATAATGTaGGATCCTTGCCTGCTGCGTCGCAGAGCGGGCTGGGCGGCTGTC +
Preference number: 5 (lower is better)
Translates to: FIKCQAFCVGQRLIM*DPCLLRRRAGWAAV
Trigger: GACAGCCGCCCAGCCCGCTCTGCGACGCAGCAGGCAAGGATCTCACATTATCAGTCTTTGACCGACACAGAATGCCTGGCATTTGATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464789.2
CDS CCA 90 bp TGCCAGAACTTCTGGAGGGAGAGCACACTGCCAATACCCACTTCATaGAATACCTGCTCCATCACATCAGGAAAAGGAGTCTGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: CQNFWRESTLPIPTS*NTCSITSGKGVCPS
Trigger: GCTGGGACAGACTCCTTTTCCTGATGTGATGGAGCAGGTATTCCATGAAGTGGGTATTGGCAGTGTGCTCTCCCTCCAGAAGTTCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACTTCTTGCAGCGCTGGTaGAAAACAGGGGAGGACCCC +
Preference number: 5 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHFLQRW*KTGEDP
Trigger: GGGGTCCTCCCCTGTTTTCAACCAGCGCTGCAAGAA...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS TCA 90 bp TTTATCAAATGCCAGGCATTCTGTGTCGGTCAAAGACTGATAATGTaGGATCCTTGCCCGAAAGGAGCACGAAGAACAGGCACGGAGCCC +
Preference number: 5 (lower is better)
Translates to: FIKCQAFCVGQRLIM*DPCPKGARRTGTEP
Trigger: GGGCTCCGTGCCTGTTCTTCGTGCTCCTTTCGGGCAAGGATCTCACATTATCAGTCTTTGACCGACACAGAATGCCTGGCATTTGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS CCA 90 bp CCACCAGACGGAACTCCCGTGGGAGCAAATCGAAGGAACTTCTGTTaGTCTGGCTTGATGATATTGGTATCTCTCCCCAGTATCTTTGCA +
Preference number: 5 (lower is better)
Translates to: PPDGTPVGANRRNFC*SGLMILVSLPSIFA
Trigger: TGCAAAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCACGGGAGTTCCGTCTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS CCA 90 bp AAAAGTCACTCTCTGGGTCACTGTGCCGGATCTGGAATGGTGCATTaGGATTCTTACAATCTAAAGGCAGGAGGTCATCAGGGAGAGGAG +
Preference number: 5 (lower is better)
Translates to: KSHSLGHCAGSGMVH*DSYNLKAGGHQGEE
Trigger: CTCCTCTCCCTGATGACCTCCTGCCTTTAGATTGTAAGAATCCCAATGCACCATTCCAGATCCGGCACAGTGACCCAGAGAGTGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CCA 90 bp CCACCAGACGGAACTCCCGTGGGAGCAAATCGAAGGAACTTCTGTTaGTCTGGCTTGATGATATTGGTATCTCTCCCCAGTATCTCAACA +
Preference number: 5 (lower is better)
Translates to: PPDGTPVGANRRNFC*SGLMILVSLPSIST
Trigger: TGTTGAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCACGGGAGTTCCGTCTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGGGGGCTTCGGCTTGTaGGCTGAGGGTTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: CITCLVIVKTTIGDSALVGGFGL*AEGWCR
Trigger: CCTGCACCAACCCTCAGCCAACAAGCCGAAGCCCCC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCGCTGTGGCAATAAGGTaGCGAAGACGTCGGTTGTGC +
Preference number: 5 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIAVAIR*RRRRLC
Trigger: GCACAACCGACGTCTTCGCAACCTTATTGCCACAGC...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CAA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCCGCGTGGGCCAGGATaGTGGCCACTGCCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYPRGPG*WPLPGR
Trigger: TCTACCAGGCAGTGGCCACAATCCTGGCCCACGCGG...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCCCGCGTGGGCCAGGATaGTGGCCACTGCCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: CITCLVIVKTTIGDSALVPRGPG*WPLPGR
Trigger: TCTACCAGGCAGTGGCCACAATCCTGGCCCACGCGG...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGGGGGCTTCGGCTTGTaGGCTGAGGGTTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTGGFGL*AEGWCR
Trigger: CCTGCACCAACCCTCAGCCAACAAGCCGAAGCCCCC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAACCGCGTGGGCCAGGATaGTGGCCACTGCCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: ITALINVCPASTFYSILKPRGPG*WPLPGR
Trigger: TCTACCAGGCAGTGGCCACAATCCTGGCCCACGCGG...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACCGCGTGGGCCAGGATaGTGGCCACTGCCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTPRGPG*WPLPGR
Trigger: TCTACCAGGCAGTGGCCACAATCCTGGCCCACGCGG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACTGCAGTGAGTCGAAATaGCACCATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHCSESK*HHCTPA
Trigger: GGCTGGAGTGCAATGGTGCAATTTCGACTCACTGCA...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS CCA 90 bp AGACGGAACTCCCGTGGGAGCAAATCGAAGGAACTTCTGTTGGTCTaGCTTGATGATATTGGTATCTCTCCCCAGTATCTTTGCAGATTC +
Preference number: 5 (lower is better)
Translates to: RRNSRGSKSKELLLV*LDDIGISPQYLCRF
Trigger: GAATCTGCAAAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCACGGGAGTTCCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGGGGGCTTCGGCTTGTaGGCTGAGGGTTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: INGCITCLVIVKTTIGDSGGFGL*AEGWCR
Trigger: CCTGCACCAACCCTCAGCCAACAAGCCGAAGCCCCC...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCCTCACAGGTTCCTCCTaGATCTTCACAGGTTTAGCG +
Preference number: 5 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSILTGSS*IFTGLA
Trigger: CGCTAAACCTGTGAAGATCAAGGAGGAACCTGTGAG...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCGCAAAGTCCGTGGATTaGGGTCAGAGGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIAKSVD*GQRHIS
Trigger: TGAAATGTGCCTCTGACCCAAATCCACGGACTTTGC...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS CCA 90 bp AGACGGAACTCCCGTGGGAGCAAATCGAAGGAACTTCTGTTGGTCTaGCTTGATGATATTGGTATCTCTCCCCAGTATCTCAACATTTTG +
Preference number: 5 (lower is better)
Translates to: RRNSRGSKSKELLLV*LDDIGISPQYLNIL
Trigger: CAAAATGTTGAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCACGGGAGTTCCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCTTCCTCATCCTCTTCTaGCAGCGCTGGTTGAAAACA +
Preference number: 5 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIFLILF*QRWLKT
Trigger: TGTTTTCAACCAGCGCTGCAAGAAGAGGATGAGGAA...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCGCTGTGGCAATAAGGTaGCGAAGACGTCGGTTGTGC +
Preference number: 5 (lower is better)
Translates to: CITCLVIVKTTIGDSALVAVAIR*RRRRLC
Trigger: GCACAACCGACGTCTTCGCAACCTTATTGCCACAGC...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAACTCACAGGTTCCTCCTaGATCTTCACAGGTTTAGCG +
Preference number: 5 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKLTGSS*IFTGLA
Trigger: CGCTAAACCTGTGAAGATCAAGGAGGAACCTGTGAG...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCCATTTACCTCTGCACTaGAAGCCTGTGGTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSHLPLH*KPVVKL
Trigger: AAGCTTCACCACAGGCTTCAAGTGCAGAGGTAAATG...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATTCTTGCAGCGCTGGTaGAAAACAGGGGAGGACCCC +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTFLQRW*KTGEDP
Trigger: GGGGTCCTCCCCTGTTTTCAACCAGCGCTGCAAGAA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCCAAAAACCTTTTCTGTaGGGTCTAGTAGGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIQKPFL*GLVGLD
Trigger: GTCCAGACCTACTAGACCCAACAGAAAAGGTTTTTG...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACAAAATGCAACCTTGTTaGGTGACGTCCAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHKMQPC*VTSSSS
Trigger: AGAGGAACTGGACGTCACCAAACAAGGTTGCATTTT...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACGTCCTTGGACAGTACTaGTTTGCTTTGCTCACAAAG +
Preference number: 5 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHVLGQY*FALLTK
Trigger: CTTTGTGAGCAAAGCAAACAAGTACTGTCCAAGGAC...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGTGCAGTGAGTCGAAATaGCACCATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: VLNVCWMNELNSHTATLWCSESK*HHCTPA
Trigger: GGCTGGAGTGCAATGGTGCAATTTCGACTCACTGCA...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACCTCTCCCCAGTATCTTaGCAGATTCATTGTCCATAT +
Preference number: 5 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHLSPVS*QIHCPY
Trigger: ATATGGACAATGAATCTGCAAAGATACTGGGGAGAG...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CAA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCTCTGGCTTGATGATATaGGTATCTCTCCCCAGTATC +
Preference number: 5 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSSGLMI*VSLPSI
Trigger: GATACTGGGGAGAGATACCAATATCATCAAGCCAGA...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGCTGTGGCAATAAGGTaGCGAAGACGTCGGTTGTGC +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTAVAIR*RRRRLC
Trigger: GCACAACCGACGTCTTCGCAACCTTATTGCCACAGC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTTCTTGCAGCGCTGGTaGAAAACAGGGGAGGACCCC +
Preference number: 5 (lower is better)
Translates to: INGCITCLVIVKTTIGDSFLQRW*KTGEDP
Trigger: GGGGTCCTCCCCTGTTTTCAACCAGCGCTGCAAGAA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACCAGTACTTGTTTGCTTaGCTCACAAAGGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHQYLFA*LTKEKR
Trigger: CCTTTTCTCCTTTGTGAGCAAAGCAAACAAGTACTG...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACACCCCGAAAGCTGGTTaGTTGATTAGTGATCTAAGA +
Preference number: 5 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHTPKAG*LISDLR
Trigger: TCTTAGATCACTAATCAACAAACCAGCTTTCGGGGT...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404798.6
CDS-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTGTGGCAATAAGGTaGCGAAGACGTCGGTTGTGC +
Preference number: 5 (lower is better)
Translates to: INGCITCLVIVKTTIGDSAVAIR*RRRRLC
Trigger: GCACAACCGACGTCTTCGCAACCTTATTGCCACAGC...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCCTCACAGGTTCCTCCTaGATCTTCACAGGTTTAGCG +
Preference number: 5 (lower is better)
Translates to: CITCLVIVKTTIGDSALVLTGSS*IFTGLA
Trigger: CGCTAAACCTGTGAAGATCAAGGAGGAACCTGTGAG...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAAGTCCTTGGACAGTACTaGTTTGCTTTGCTCACAAAG +
Preference number: 5 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKVLGQY*FALLTK
Trigger: CTTTGTGAGCAAAGCAAACAAGTACTGTCCAAGGAC...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCGTTGAAAGGTGCATATaGCTATGTTTTAAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIVERCI*LCFKGC
Trigger: GCAGCCTTTAAAACATAGCAATATGCACCTTTCAAC...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp TCAGAGGCACATTTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACGCATCATCTGGGGAATaGTTCAACTTACCTCTTATA +
Preference number: 5 (lower is better)
Translates to: SEAHFIHNSPYKRLPCLHASSGE*FNLPLI
Trigger: TATAAGAGGTAAGTTGAACAATTCCCCAGATGATGC...GTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAAATGTGCCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCTTAGTGGTTCTCACATaGTGGACCAGGAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: CITCLVIVKTTIGDSALVLVVLT*WTRSIS
Trigger: GCTGATGCTCCTGGTCCACAATGTGAGAACCACTAA...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTATTAGTGGTTCTCACATaGTGGACCAGGAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: HILTKYRARPSLYCTLNLLVVLT*WTRSIS
Trigger: GCTGATGCTCCTGGTCCACAATGTGAGAACCACTAA...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS CCA 90 bp TCATACTATGACAATTCCTACTACACTGAACCACAGGGTAGAATTTaGGTCATTAGTGGACCAATAGCTACAACAGCATCTGGAGCTCTA +
Preference number: 5 (lower is better)
Translates to: SYYDNSYYTEPQGRI*VISGPIATTASGAL
Trigger: TAGAGCTCCAGATGCTGTTGTAGCTATTGGTCCACTAATGACCCAAATTCTACCCTGTGGTTCAGTGTAGTAGGAATTGTCATAGTATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp GTGTGCTTAATGGACTGCTGTCCTCTGATGACCAAGCAAATGCAACAAATGAAATTCTGTTGGTCTGGCTaGATGATATTGGTATCTCTC +
Preference number: 5 (lower is better)
Translates to: VCLMDCCPLMTKQMQQMKFCWSG*MILVSL
Trigger: GAGAGATACCAATATCATCAAGCCAGACCAACAGAA...TTTCATTTGTTGCATTTGCTTGGTCATCAGAGGACAGCAGTCCATTAAGCACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACTCACAGGTTCCTCCTaGATCTTCACAGGTTTAGCG +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTLTGSS*IFTGLA
Trigger: CGCTAAACCTGTGAAGATCAAGGAGGAACCTGTGAG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCCATTTACCTCTGCACTaGAAGCCTGTGGTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: CITCLVIVKTTIGDSALVHLPLH*KPVVKL
Trigger: AAGCTTCACCACAGGCTTCAAGTGCAGAGGTAAATG...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTATGCACAAGGCTGTCCTaGGACAGTACTTGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: HILTKYRARPSLYCTLNLCTRLS*DSTCLL
Trigger: AAGCAAACAAGTACTGTCCAAGGACAGCCTTGTGCA...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp GATTTTCGCAAAGTCCGTGGATTTGGGTCAGAGGCACATTTCATACATAACAGCGTTGAAAGGTGCATATaGCTATGTTTTAAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: DFRKVRGFGSEAHFIHNSVERCI*LCFKGC
Trigger: GCAGCCTTTAAAACATAGCAATATGCACCTTTCAAC...GCTGTTATGTATGAAATGTGCCTCTGACCCAAATCCACGGACTTTGCGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp TCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATTGTGGACCAGGAGCATCCATGAAGCAACACATTaGCTAATGATTCCTAATCAC +
Preference number: 5 (lower is better)
Translates to: SMSQYSNLVVLTLWTRSIHEATH*LMIPNH
Trigger: GTGATTAGGAATCATTAGCAAATGTGTTGCTTCATG...GATGCTCCTGGTCCACAATGTGAGAACCACTAAGTTGGAGTACTGACTCATAGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCTCACAGGTTCCTCCTaGATCTTCACAGGTTTAGCG +
Preference number: 5 (lower is better)
Translates to: INGCITCLVIVKTTIGDSLTGSS*IFTGLA
Trigger: CGCTAAACCTGTGAAGATCAAGGAGGAACCTGTGAG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACATTTACCTCTGCACTaGAAGCCTGTGGTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTHLPLH*KPVVKL
Trigger: AAGCTTCACCACAGGCTTCAAGTGCAGAGGTAAATG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAATTCCTCATCCTCTTCTaGCAGCGCTGGTTGAAAACA +
Preference number: 5 (lower is better)
Translates to: ITALINVCPASTFYSILKFLILF*QRWLKT
Trigger: TGTTTTCAACCAGCGCTGCAAGAAGAGGATGAGGAA...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATTCCTCATCCTCTTCTaGCAGCGCTGGTTGAAAACA +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTFLILF*QRWLKT
Trigger: TGTTTTCAACCAGCGCTGCAAGAAGAGGATGAGGAA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCAGCCCTTATAAACGTTaGCCCTGCCTCCACATTTTA +
Preference number: 5 (lower is better)
Translates to: CITCLVIVKTTIGDSALVSPYKR*PCLHIL
Trigger: TAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCT...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACAGCAAAGTCCGTGGATTaGGGTCAGAGGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTAKSVD*GQRHIS
Trigger: TGAAATGTGCCTCTGACCCAAATCCACGGACTTTGC...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCCCGAAAGCTGGTTTGTaGATTAGTGATCTAAGACCG +
Preference number: 5 (lower is better)
Translates to: CITCLVIVKTTIGDSALVPKAGL*ISDLRP
Trigger: CGGTCTTAGATCACTAATCAACAAACCAGCTTTCGG...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGTTCCCCTTTCCCACTTaGCAGATTCATTGTCCATAT +
Preference number: 5 (lower is better)
Translates to: VLNVCWMNELNSHTATLWFPFPT*QIHCPY
Trigger: ATATGGACAATGAATCTGCAAAGTGGGAAAGGGGAA...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404798.6
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATCTGGCTTGATGATATaGGTATCTCTCCCCAGTATC +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTSGLMI*VSLPSI
Trigger: GATACTGGGGAGAGATACCAATATCATCAAGCCAGA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATTCGAAGGAACTTCTGTaGGTCTGGCTTGATGATATT +
Preference number: 5 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYSKELL*VWLDDI
Trigger: AATATCATCAAGCCAGACCAACAGAAGTTCCTTCGA...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCATTTACCTCTGCACTaGAAGCCTGTGGTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: INGCITCLVIVKTTIGDSHLPLH*KPVVKL
Trigger: AAGCTTCACCACAGGCTTCAAGTGCAGAGGTAAATG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTTCCTCATCCTCTTCTaGCAGCGCTGGTTGAAAACA +
Preference number: 5 (lower is better)
Translates to: INGCITCLVIVKTTIGDSFLILF*QRWLKT
Trigger: TGTTTTCAACCAGCGCTGCAAGAAGAGGATGAGGAA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAAAAATGCAACCTTGTTaGGTGACGTCCAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTKMQPC*VTSSSS
Trigger: AGAGGAACTGGACGTCACCAAACAAGGTTGCATTTT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TTCATACATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATTTGGACAGTACTTGTTaGCTTTGCTCACAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: FIHNSPYKRLPCLHILQYLDSTC*LCSQRR
Trigger: TCTCCTTTGTGAGCAAAGCAAACAAGTACTGTCCAA...ATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTATGTATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp CACATACTGACTAAATACAGAGCTAGGCCCAGTTTGTATTGTACTCTGAACTTAAAGCTGTGCCTTATTTaGGTCTGCATTAAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: HILTKYRARPSLYCTLNLKLCLI*VCIKGV
Trigger: CACTCCTTTAATGCAGACCAAAATAAGGCACAGCTT...TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCTGTATTTAGTCAGTATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGGCATCATCTGGGGAATaGTTCAACTTACCTCTTATA +
Preference number: 5 (lower is better)
Translates to: VLNVCWMNELNSHTATLWASSGE*FNLPLI
Trigger: TATAAGAGGTAAGTTGAACAATTCCCCAGATGATGC...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAAGCCCTTATAAACGTTaGCCCTGCCTCCACATTTTA +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTSPYKR*PCLHIL
Trigger: TAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACACCGAAAGCTGGTTTGTaGATTAGTGATCTAAGACCG +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTPKAGL*ISDLRP
Trigger: CGGTCTTAGATCACTAATCAACAAACCAGCTTTCGG...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCACCCCGAAAGCTGGTTaGTTGATTAGTGATCTAAGA +
Preference number: 5 (lower is better)
Translates to: CITCLVIVKTTIGDSALVTPKAG*LISDLR
Trigger: TCTTAGATCACTAATCAACAAACCAGCTTTCGGGGT...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCTCAAATGGCTTCCCATaGCCTATTGGAAAAAGTCAG +
Preference number: 5 (lower is better)
Translates to: CITCLVIVKTTIGDSALVSNGFP*PIGKSQ
Trigger: CTGACTTTTTCCAATAGGCAATGGGAAGCCATTTGA...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp GTACTCAATGTTTGCTGGATGAATGAACTAAATTCCCATACGGCCACTTTATGGCACTTTGCAGATTCATaGTCCATATGTCTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: VLNVCWMNELNSHTATLWHFADS*SICLFK
Trigger: CTTGAAGAGACATATGGACAATGAATCTGCAAAGTG...CCATAAAGTGGCCGTATGGGAATTTAGTTCATTCATCCAGCAAACATTGAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404798.6
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATCGAAGGAACTTCTGTaGGTCTGGCTTGATGATATT +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTSKELL*VWLDDI
Trigger: AATATCATCAAGCCAGACCAACAGAAGTTCCTTCGA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACACAAAAACCTTTTCTGTaGGGTCTAGTAGGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTQKPFL*GLVGLD
Trigger: GTCCAGACCTACTAGACCCAACAGAAAAGGTTTTTG...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACAAAAATGCAACCTTGTTaGGTGACGTCCAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTKMQPC*VTSSSS
Trigger: AGAGGAACTGGACGTCACCAAACAAGGTTGCATTTT...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTAAAATGCAACCTTGTTaGGTGACGTCCAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: INGCITCLVIVKTTIGDSKMQPC*VTSSSS
Trigger: AGAGGAACTGGACGTCACCAAACAAGGTTGCATTTT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAACAGTACTTGTTTGCTTaGCTCACAAAGGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: ITALINVCPASTFYSILKQYLFA*LTKEKR
Trigger: CCTTTTCTCCTTTGTGAGCAAAGCAAACAAGTACTG...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACATTGGACAGTACTTGTTaGCTTTGCTCACAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTLDSTC*LCSQRR
Trigger: TCTCCTTTGTGAGCAAAGCAAACAAGTACTGTCCAA...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAAAGAGCTAGGCCCAGTTaGTATTGTACTCTGAACTTA +
Preference number: 5 (lower is better)
Translates to: ITALINVCPASTFYSILKRARPS*YCTLNL
Trigger: TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCT...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAAGAGCTAGGCCCAGTTaGTATTGTACTCTGAACTTA +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTRARPS*YCTLNL
Trigger: TAAGTTCAGAGTACAATACAAACTGGGCCTAGCTCT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACACCGAAAGCTGGTTTGTaGATTAGTGATCTAAGACCG +
Preference number: 5 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTPKAGL*ISDLRP
Trigger: CGGTCTTAGATCACTAATCAACAAACCAGCTTTCGG...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404798.6
CDS-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCCGAAAGCTGGTTTGTaGATTAGTGATCTAAGACCG +
Preference number: 5 (lower is better)
Translates to: INGCITCLVIVKTTIGDSPKAGL*ISDLRP
Trigger: CGGTCTTAGATCACTAATCAACAAACCAGCTTTCGG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAACCCCGAAAGCTGGTTaGTTGATTAGTGATCTAAGA +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTTPKAG*LISDLR
Trigger: TCTTAGATCACTAATCAACAAACCAGCTTTCGGGGT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCACCTTTGCAGATTCATaGTCCATATGTCTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: CITCLVIVKTTIGDSALVTFADS*SICLFK
Trigger: CTTGAAGAGACATATGGACAATGAATCTGCAAAGGT...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS CCA 90 bp TCTGGCTTGATGATATTGGTATCTCTCCCCAGTATCTCAACATTTTaGAATAAGAAGAGAAGAGGTCTCAGGATAAATGTAGACAATAAC +
Preference number: 5 (lower is better)
Translates to: SGLMILVSLPSISTF*NKKRRGLRINVDNN
Trigger: GTTATTGTCTACATTTATCCTGAGACCTCTTCTCTTCTTATTCCAAAATGTTGAGATACTGGGGAGAGATACCAATATCATCAAGCCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTCGAAGGAACTTCTGTaGGTCTGGCTTGATGATATT +
Preference number: 5 (lower is better)
Translates to: INGCITCLVIVKTTIGDSSKELL*VWLDDI
Trigger: AATATCATCAAGCCAGACCAACAGAAGTTCCTTCGA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp CTTTCAAAGAATTTTATCTCTATGAGTCAGTACTCCAACTTAGTGGTTCTCACATCTGTGAAGGGTGGCTaGGTTGTGGAAAACTATAAA +
Preference number: 5 (lower is better)
Translates to: LSKNFISMSQYSNLVVLTSVKGG*VVENYK
Trigger: TTTATAGTTTTCCACAACCAAGCCACCCTTCACAGA...TGTGAGAACCACTAAGTTGGAGTACTGACTCATAGAGATAAAATTCTTTGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp TGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTGCTTTGGTCCATGAAGCAACACATTaGCTAATGATTCCTAATCAC +
Preference number: 5 (lower is better)
Translates to: CITCLVIVKTTIGDSALVHEATH*LMIPNH
Trigger: GTGATTAGGAATCATTAGCAAATGTGTTGCTTCATG...GACCAAAGCACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337768.10
ENST00000404798.6
CDS-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTACCCCGAAAGCTGGTTaGTTGATTAGTGATCTAAGA +
Preference number: 5 (lower is better)
Translates to: INGCITCLVIVKTTIGDSTPKAG*LISDLR
Trigger: TCTTAGATCACTAATCAACAAACCAGCTTTCGGGGT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAACCTTTGCAGATTCATaGTCCATATGTCTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTTFADS*SICLFK
Trigger: CTTGAAGAGACATATGGACAATGAATCTGCAAAGGT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTTCAAATGGCTTCCCATaGCCTATTGGAAAAAGTCAG +
Preference number: 5 (lower is better)
Translates to: INGCITCLVIVKTTIGDSSNGFP*PIGKSQ
Trigger: CTGACTTTTTCCAATAGGCAATGGGAAGCCATTTGA...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTCCCTTTGCAGATTCATaGTCCATATGTCTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: INGCITCLVIVKTTIGDSPFADS*SICLFK
Trigger: CTTGAAGAGACATATGGACAATGAATCTGCAAAGGG...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405491.5
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAATCTTTGCAGATTCATaGTCCATATGTCTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTIFADS*SICLFK
Trigger: CTTGAAGAGACATATGGACAATGAATCTGCAAAGAT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CAA 90 bp ATAACAGCCCTTATAAACGTTTGCCCTGCCTCCACATTTTACAGTATCTTAAAAATCTGGAATGGTGCATaGGGATTCTTACAATCTAAA +
Preference number: 5 (lower is better)
Translates to: ITALINVCPASTFYSILKIWNGA*GFLQSK
Trigger: TTTAGATTGTAAGAATCCCAATGCACCATTCCAGAT...TTTTAAGATACTGTAAAATGTGGAGGCAGGGCAAACGTTTATAAGGGCTGTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAATCTGGAATGGTGCATaGGGATTCTTACAATCTAAA +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTIWNGA*GFLQSK
Trigger: TTTAGATTGTAAGAATCCCAATGCACCATTCCAGAT...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp AAATCCTCACATCTCTACAAGGTAGGTCAAAGTATGATTCTTCTCAGTTGTACAGTTAGATGCTGGTTATaGTCATACTATGACAATTCC +
Preference number: 5 (lower is better)
Translates to: KSSHLYKVGQSMILLSCTVRCWL*SYYDNS
Trigger: GGAATTGTCATAGTATGACAATAACCAGCATCTAAC...TGTACAACTGAGAAGAATCATACTTTGACCTACCTTGTAGAGATGTGAGGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS-3UTR CAA 90 bp ATAAATGGCTGTATAACATGTCTAGTCATAGTTAAGACAACAATTGGGGACAGTAAAGGTGTTCTCCCTTaGCAGATTCATTGTCCATAT +
Preference number: 5 (lower is better)
Translates to: INGCITCLVIVKTTIGDSKGVLP*QIHCPY
Trigger: ATATGGACAATGAATCTGCAAAGGGAGAACACCTTT...ACTGTCCCCAATTGTTGTCTTAACTATGACTAGACATGTTATACAGCCATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405491.5
CDS GCA 90 bp GGCTTACCATTCAACAAAATTCACAATCTGGTTTCAACTCACCTTTaGAGATTCATTGTCCATATGTCTCTTCAAGTTCAACAAACATTT +
Preference number: 5 (lower is better)
Translates to: GLPFNKIHNLVSTHL*RFIVHMSLQVQQTF
Trigger: AAATGTTTGTTGAACTTGAAGAGACATATGGACAATGAATCTGCAAAGGTGAGTTGAAACCAGATTGTGAATTTTGTTGAATGGTAAGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406540.5
ENST00000464789.2
CDS TCA 72 bp CACGGTCCGCCGGCGCAGGCGCCAATCACAGGGTCCTaGGGTCGCCTGACGTTCAGGGCAGCCGGAAGACGG +
Preference number: 6 (lower is better)
Translates to: HGPPAQAPITGS*GRLTFRAAGRR
Trigger: CCGTCTTCCGGCTGCCCTGAACGTCAGGCGACCTCAGGACCCTGTGATTGGCGCCTGCGCCGGCGGACCGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS TCA 72 bp CGGCGCAGGCGCCAATCACAGGGTCCTGAGGTCGCCTaGCGTTCAGGGCAGCCGGAAGACGGGGAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: RRRRQSQGPEVA*RSGQPEDGEVW
Trigger: CCAGACCTCCCCGTCTTCCGGCTGCCCTGAACGTCAGGCGACCTCAGGACCCTGTGATTGGCGCCTGCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS CCA 72 bp TCACTGCTGCGTCGCAGAGCGGGCTGGGCGGCTGTCTaGACCTCGAGAGGCCTGAGGCAAGGATCGCGTCAG +
Preference number: 6 (lower is better)
Translates to: SLLRRRAGWAAV*TSRGLRQGSRQ
Trigger: CTGACGCGATCCTTGCCTCAGGCCTCTCGAGGTCCAGACAGCCGCCCAGCCCGCTCTGCGACGCAGCAGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS CCA 72 bp GTACCACACTATTCACTGCTGCGTCGCAGAGCGGGCTaGGCGGCTGTCTGGACCTCGAGAGGCCTGAGGCAA +
Preference number: 6 (lower is better)
Translates to: VPHYSLLRRRAG*AAVWTSRGLRQ
Trigger: TTGCCTCAGGCCTCTCGAGGTCCAGACAGCCGCCCAGCCCGCTCTGCGACGCAGCAGTGAATAGTGTGGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS TCA 72 bp CGTTCAGGGCAGCCGGAAGACGGGGAGGTCTGGACCTaGACCGAGACAAGGAGGTACCACACTATTCACTGC +
Preference number: 6 (lower is better)
Translates to: RSGQPEDGEVWT*TETRRYHTIHC
Trigger: GCAGTGAATAGTGTGGTACCTCCTTGTCTCGGTTCAGGTCCAGACCTCCCCGTCTTCCGGCTGCCCTGAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS GCA 72 bp AAAGGAGCACGAAGAACAGGCACGGAGCCCAAGGAATaGCCAAGTCCCTCCAGGGGTTTCCTCGGTCACGGT +
Preference number: 6 (lower is better)
Translates to: KGARRTGTEPKE*PSPSRGFLGHG
Trigger: ACCGTGACCGAGGAAACCCCTGGAGGGACTTGGGCATTCCTTGGGCTCCGTGCCTGTTCTTCGTGCTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS CAA 90 bp ATGCCAGGCATTCTGTGTCGGTCAAAGACTGATAATGTGAGATCCTaGCCTGCTGCGTCGCAGAGCGGGCTGGGCGGCTGTCTGGACCTC +
Preference number: 6 (lower is better)
Translates to: MPGILCRSKTDNVRS*PAASQSGLGGCLDL
Trigger: GAGGTCCAGACAGCCGCCCAGCCCGCTCTGCGACGCAGCAGGCAAGGATCTCACATTATCAGTCTTTGACCGACACAGAATGCCTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464789.2
CDS TCA 72 bp GCTTCAACCTCCAGGTTAGATGGGAAGCGTTCGCTCTaGGCCCCAAGCACTCCCATAGGCAGTGACTGGTCT +
Preference number: 6 (lower is better)
Translates to: ASTSRLDGKRSL*APSTPIGSDWS
Trigger: AGACCAGTCACTGCCTATGGGAGTGCTTGGGGCTCAGAGCGAACGCTTCCCATCTAACCTGGAGGTTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS TCA 72 bp TCTCATGTTAGCACCACTTCGCAACGCTCCAGGTCGTaGAGGAGCAACTTCACCATCGCCGCCTACAGACGC +
Preference number: 6 (lower is better)
Translates to: SHVSTTSQRSRS*RSNFTIAAYRR
Trigger: GCGTCTGTAGGCGGCGATGGTGAAGTTGCTCCTTCACGACCTGGAGCGTTGCGAAGTGGTGCTAACATGAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404798.6
CDS TCA 72 bp TGCCAGGCATTCTGTGTCGGTCAAAGACTGATAATGTaGGATCCTTGCCTGCTGCGTCGCAGAGCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: CQAFCVGQRLIM*DPCLLRRRAGW
Trigger: CCAGCCCGCTCTGCGACGCAGCAGGCAAGGATCTCACATTATCAGTCTTTGACCGACACAGAATGCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464789.2
CDS CCA 72 bp GGGTGGGTCATGGACTTCCACCAGACGGAACTCCCGTaGGAGCAAATCGAAGGAACTTCTGTTGGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: GWVMDFHQTELP*EQIEGTSVGLA
Trigger: AGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCACGGGAGTTCCGTCTGGTGGAAGTCCATGACCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS TCA 72 bp ATCAGGGCTCTGAGGAATCCCAGCTTCACTCATGCCTaGCATAGGCTCCTCGAAGACATCACTGCCCAGCAC +
Preference number: 6 (lower is better)
Translates to: IRALRNPSFTHA*HRLLEDITAQH
Trigger: GTGCTGGGCAGTGATGTCTTCGAGGAGCCTATGTCAGGCATGAGTGAAGCTGGGATTCCTCAGAGCCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS TCA 72 bp GAGGCTGTCAGTGGAGTGGGAACCATAGCTGCTATCTaGGTCATCAGGGCTCTGAGGAATCCCAGCTTCACT +
Preference number: 6 (lower is better)
Translates to: EAVSGVGTIAAI*VIRALRNPSFT
Trigger: AGTGAAGCTGGGATTCCTCAGAGCCCTGATGACTCAGATAGCAGCTATGGTTCCCACTCCACTGACAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS GCA 72 bp TGCGGTGCTGCCAGAACTTCTGGAGGGAGAGCACACTaGCAATACCCACTTCATGGAATACCTGCTCCATCA +
Preference number: 6 (lower is better)
Translates to: CGAARTSGGRAH*QYPLHGIPAPS
Trigger: TGATGGAGCAGGTATTCCATGAAGTGGGTATTGGCAGTGTGCTCTCCCTCCAGAAGTTCTGGCAGCACCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CCA 72 bp CACAGGTTCCCCTTTCCCACGATAAAAGTCACTCTCTaGGTCACTGTGCCGGATCTGGAATGGTGCATTGGG +
Preference number: 6 (lower is better)
Translates to: HRFPFPTIKVTL*VTVPDLEWCIG
Trigger: CCCAATGCACCATTCCAGATCCGGCACAGTGACCCAGAGAGTGACTTTTATCGTGGGAAAGGGGAACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CAA 72 bp AGCCGGGCCTCCCGGTCCACAGCAAAACGCAGCAACTaGGTAAACTTAAGGCAATACTCATGTGCCACATCA +
Preference number: 6 (lower is better)
Translates to: SRASRSTAKRSN*VNLRQYSCATS
Trigger: TGATGTGGCACATGAGTATTGCCTTAAGTTTACCAAGTTGCTGCGTTTTGCTGTGGACCGGGAGGCCCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CAA 72 bp AGGCAAGGATCGCGTCAGACCCCGAAAGCTGGTTTGTaGATTAGTGATCTAAGACCGCCGGAAGCGCTTCTT +
Preference number: 6 (lower is better)
Translates to: RQGSRQTPKAGL*ISDLRPPEALL
Trigger: AAGAAGCGCTTCCGGCGGTCTTAGATCACTAATCAACAAACCAGCTTTCGGGGTCTGACGCGATCCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CAA 90 bp ATGCCAGGCATTCTGTGTCGGTCAAAGACTGATAATGTGAGATCCTaGCCCGAAAGGAGCACGAAGAACAGGCACGGAGCCCAAGGAATG +
Preference number: 6 (lower is better)
Translates to: MPGILCRSKTDNVRS*PERSTKNRHGAQGM
Trigger: CATTCCTTGGGCTCCGTGCCTGTTCTTCGTGCTCCTTTCGGGCAAGGATCTCACATTATCAGTCTTTGACCGACACAGAATGCCTGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS CAA 90 bp AGCTCCTCACTGACAGGAAAAGTGATGTCGCTCACAGGTTCCTCCTaGATCTTCACAGGTTTAGCGTCCTCTGTGGCCTTCTCAGGATTG +
Preference number: 6 (lower is better)
Translates to: SSSLTGKVMSLTGSS*IFTGLASSVAFSGL
Trigger: CAATCCTGAGAAGGCCACAGAGGACGCTAAACCTGTGAAGATCAAGGAGGAACCTGTGAGCGACATCACTTTTCCTGTCAGTGAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS TCA 72 bp TGCCAGGCATTCTGTGTCGGTCAAAGACTGATAATGTaGGATCCTTGCCCGAAAGGAGCACGAAGAACAGGC +
Preference number: 6 (lower is better)
Translates to: CQAFCVGQRLIM*DPCPKGARRTG
Trigger: GCCTGTTCTTCGTGCTCCTTTCGGGCAAGGATCTCACATTATCAGTCTTTGACCGACACAGAATGCCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS GCA 72 bp GAGAGCACACTGCCAATACCCACTTCATGGAATACCTaGTCCATCACATCAGGAAAAGGAGTCTGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: ESTLPIPTSWNT*SITSGKGVCPS
Trigger: GCTGGGACAGACTCCTTTTCCTGATGTGATGGAGCAGGTATTCCATGAAGTGGGTATTGGCAGTGTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CAA 72 bp ATTCTGTGTCGGTCAAAGACTGATAATGTGAGATCCTaGCCCGAAAGGAGCACGAAGAACAGGCACGGAGCC +
Preference number: 6 (lower is better)
Translates to: ILCRSKTDNVRS*PERSTKNRHGA
Trigger: GGCTCCGTGCCTGTTCTTCGTGCTCCTTTCGGGCAAGGATCTCACATTATCAGTCTTTGACCGACACAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
CDS CAA 72 bp CGGAACTCCCGTGGGAGCAAATCGAAGGAACTTCTGTaGGTCTGGCTTGATGATATTGGTATCTCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: RNSRGSKSKELL*VWLDDIGISPQ
Trigger: CTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCACGGGAGTTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CAA 72 bp CTGACAGGAAAAGTGATGTCGCTCACAGGTTCCTCCTaGATCTTCACAGGTTTAGCGTCCTCTGTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: LTGKVMSLTGSS*IFTGLASSVAF
Trigger: GAAGGCCACAGAGGACGCTAAACCTGTGAAGATCAAGGAGGAACCTGTGAGCGACATCACTTTTCCTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CAA 90 bp TCCACCAGACGGAACTCCCGTGGGAGCAAATCGAAGGAACTTCTGTaGGTCTGGCTTGATGATATTGGTATCTCTCCCCAGTATCTTTGC +
Preference number: 6 (lower is better)
Translates to: STRRNSRGSKSKELL*VWLDDIGISPQYLC
Trigger: GCAAAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCACGGGAGTTCCGTCTGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS CAA 90 bp TCCACCAGACGGAACTCCCGTGGGAGCAAATCGAAGGAACTTCTGTaGGTCTGGCTTGATGATATTGGTATCTCTCCCCAGTATCTCAAC +
Preference number: 6 (lower is better)
Translates to: STRRNSRGSKSKELL*VWLDDIGISPQYLN
Trigger: GTTGAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCACGGGAGTTCCGTCTGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CCA 72 bp GGAACTCCCGTGGGAGCAAATCGAAGGAACTTCTGTTaGTCTGGCTTGATGATATTGGTATCTCTCCCCAGT +
Preference number: 6 (lower is better)
Translates to: GTPVGANRRNFC*SGLMILVSLPS
Trigger: ACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCACGGGAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CCA 72 bp TCTCTGGGTCACTGTGCCGGATCTGGAATGGTGCATTaGGATTCTTACAATCTAAAGGCAGGAGGTCATCAG +
Preference number: 6 (lower is better)
Translates to: SLGHCAGSGMVH*DSYNLKAGGHQ
Trigger: CTGATGACCTCCTGCCTTTAGATTGTAAGAATCCCAATGCACCATTCCAGATCCGGCACAGTGACCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CCA 72 bp TTCTGGAGGGAGAGCACACTGCCAATACCCACTTCATaGAATACCTGCTCCATCACATCAGGAAAAGGAGTC +
Preference number: 6 (lower is better)
Translates to: FWRESTLPIPTS*NTCSITSGKGV
Trigger: GACTCCTTTTCCTGATGTGATGGAGCAGGTATTCCATGAAGTGGGTATTGGCAGTGTGCTCTCCCTCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337768.10
ENST00000404798.6
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CAA 72 bp CTCTCTGGGTCACTGTGCCGGATCTGGAATGGTGCATaGGGATTCTTACAATCTAAAGGCAGGAGGTCATCA +
Preference number: 6 (lower is better)
Translates to: LSGSLCRIWNGA*GFLQSKGRRSS
Trigger: TGATGACCTCCTGCCTTTAGATTGTAAGAATCCCAATGCACCATTCCAGATCCGGCACAGTGACCCAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337768.10
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CCA 72 bp TCCCGTGGGAGCAAATCGAAGGAACTTCTGTTGGTCTaGCTTGATGATATTGGTATCTCTCCCCAGTATCTC +
Preference number: 6 (lower is better)
Translates to: SRGSKSKELLLV*LDDIGISPQYL
Trigger: GAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCACGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CAA 90 bp GGAACTCCCGTGGGAGCAAATCGAAGGAACTTCTGTTGGTCTGGCTaGATGATATTGGTATCTCTCCCCAGTATCTTTGCAGATTCATTG +
Preference number: 6 (lower is better)
Translates to: GTPVGANRRNFCWSG*MILVSLPSIFADSL
Trigger: CAATGAATCTGCAAAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCACGGGAGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS CCA 72 bp TCCCGTGGGAGCAAATCGAAGGAACTTCTGTTGGTCTaGCTTGATGATATTGGTATCTCTCCCCAGTATCTT +
Preference number: 6 (lower is better)
Translates to: SRGSKSKELLLV*LDDIGISPQYL
Trigger: AAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCACGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS CAA 90 bp GGAACTCCCGTGGGAGCAAATCGAAGGAACTTCTGTTGGTCTGGCTaGATGATATTGGTATCTCTCCCCAGTATCTCAACATTTTGGAAT +
Preference number: 6 (lower is better)
Translates to: GTPVGANRRNFCWSG*MILVSLPSISTFWN
Trigger: ATTCCAAAATGTTGAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCACGGGAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CAA 72 bp GTGGGAGCAAATCGAAGGAACTTCTGTTGGTCTGGCTaGATGATATTGGTATCTCTCCCCAGTATCTTTGCA +
Preference number: 6 (lower is better)
Translates to: VGANRRNFCWSG*MILVSLPSIFA
Trigger: TGCAAAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS CAA 72 bp GTGGGAGCAAATCGAAGGAACTTCTGTTGGTCTGGCTaGATGATATTGGTATCTCTCCCCAGTATCTCAACA +
Preference number: 6 (lower is better)
Translates to: VGANRRNFCWSG*MILVSLPSIST
Trigger: TGTTGAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS TCA 72 bp CAGCATCCCGATAACCGTTTTGTTTTTCTCATATTATaGCCTTCTCATGTTAGCACCACTTCGCAACGCTCC +
Preference number: 6 (lower is better)
Translates to: QHPDNRFVFLIL*PSHVSTTSQRS
Trigger: GGAGCGTTGCGAAGTGGTGCTAACATGAGAAGGTCATAATATGAGAAAAACAAAACGGTTATCGGGATGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404798.6
CDS CAA 90 bp ACCTCTAAATATGTCCCCGTTCTGCACAGCATCCCGATAACCGTTTaGTTTTTCTCATATTATGACCTTCTCATGTTAGCACCACTTCGC +
Preference number: 6 (lower is better)
Translates to: TSKYVPVLHSIPITV*FFSYYDLLMLAPLR
Trigger: GCGAAGTGGTGCTAACATGAGAAGGTCATAATATGAGAAAAACAAAACGGTTATCGGGATGCTGTGCAGAACGGGGACATATTTAGAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404798.6
CDS CAA 90 bp GTGGGAGCAAATCGAAGGAACTTCTGTTGGTCTGGCTTGATGATATaGGTATCTCTCCCCAGTATCTCAACATTTTGGAATAAGAAGAGA +
Preference number: 6 (lower is better)
Translates to: VGANRRNFCWSGLMI*VSLPSISTFWNKKR
Trigger: TCTCTTCTTATTCCAAAATGTTGAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATTTGCTCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2
CDS CAA 72 bp AATCGAAGGAACTTCTGTTGGTCTGGCTTGATGATATaGGTATCTCTCCCCAGTATCTTTGCAGATTCATTG +
Preference number: 6 (lower is better)
Translates to: NRRNFCWSGLMI*VSLPSIFADSL
Trigger: CAATGAATCTGCAAAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337768.10
CDS CAA 72 bp TATGTCCCCGTTCTGCACAGCATCCCGATAACCGTTTaGTTTTTCTCATATTATGACCTTCTCATGTTAGCA +
Preference number: 6 (lower is better)
Translates to: YVPVLHSIPITV*FFSYYDLLMLA
Trigger: TGCTAACATGAGAAGGTCATAATATGAGAAAAACAAAACGGTTATCGGGATGCTGTGCAGAACGGGGACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404798.6
CDS CAA 72 bp AATCGAAGGAACTTCTGTTGGTCTGGCTTGATGATATaGGTATCTCTCCCCAGTATCTCAACATTTTGGAAT +
Preference number: 6 (lower is better)
Translates to: NRRNFCWSGLMI*VSLPSISTFWN
Trigger: ATTCCAAAATGTTGAGATACTGGGGAGAGATACCAATATCATCAAGCCAGACCAACAGAAGTTCCTTCGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405491.5
ENST00000406540.5
ENST00000464789.2