RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SUOX (Homo sapiens)

Ensembl gene IDs: ENSG00000139531

Ensembl transcript IDs: ENST00000266971.8, ENST00000356124.8, ENST00000394109.7, ENST00000394115.6, ENST00000546712.1, ENST00000546833.5, ENST00000547586.5, ENST00000548274.5, ENST00000550065.1, ENST00000550121.5, ENST00000550340.5, ENST00000550478.5, ENST00000551698.5, ENST00000551841.6, ENST00000552258.5, ENST00000552813.5

Found 407 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TGGCGGGCACCCACCACTCCAGGAACCACCACACGCACAGGGAAGCCGTGGTCAAGCCAGAGGGATGGATaGTCCATAGGCAGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: WRAPTTPGTTTRTGKPWSSQRDG*SIGSPS
Trigger: ACTGGGACTGCCTATGGAGCATCCATCCCTCTGGCT...TGACCACGGCTTCCCTGTGCGTGTGGTGGTTCCTGGAGTGGTGGGTGCCCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
3UTR-3UTR TCA 90 bp CATCTCATATGCCAGCAGGACCTCAGCTTCAGGGTCCATGGCCCGAGCCAGAGGCCCAGCGTGCAGTGCTaGTGGCTCCTGTTCTCCACT +
Preference number: 2 (lower is better)
Translates to: HLICQQDLSFRVHGPSQRPSVQC*WLLFST
Trigger: AGTGGAGAACAGGAGCCATCAGCACTGCACGCTGGG...CCTCTGGCTCGGGCCATGGACCCTGAAGCTGAGGTCCTGCTGGCATATGAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
3UTR-3UTR GCA 90 bp CACCCACCACTCCAGGAACCACCACACGCACAGGGAAGCCGTGGTCACGTGGCACCCATTCATCTCATATaGCAGCAGGACCTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: HPPLQEPPHAQGSRGHVAPIHLI*QQDLSF
Trigger: GAAGCTGAGGTCCTGCTGGCATATGAGATGAATGGG...TGCCACGTGACCACGGCTTCCCTGTGCGTGTGGTGGTTCCTGGAGTGGTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
3UTR-3UTR CCA 90 bp TCTCATATGCCAGCAGGACCTCAGCTTCAGGGTCCATGGCCCGAGCCAGAGGGAAGTTGGTGGCCAGCCTaGGCTAACACATCACAGAGC +
Preference number: 2 (lower is better)
Translates to: SHMPAGPQLQGPWPEPEGSWWPA*ANTSQS
Trigger: GCTCTGTGATGTGTTAGCCCAGGCTGGCCACCAACT...TCCCTCTGGCTCGGGCCATGGACCCTGAAGCTGAGGTCCTGCTGGCATATGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
3UTR-3UTR GCA 90 bp ACTGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGATGCATCCTTCCTCCTaGAATAGGCTCACTCCCCAG +
Preference number: 2 (lower is better)
Translates to: TVLSRKPYFLTYKPTSSLMHPSS*NRLTPQ
Trigger: CTGGGGAGTGAGCCTATTGCAGGAGGAAGGATGCAT...CAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
3UTR-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGACAGCTCACACTTCCTaGCACAGGTTCAAAGGCCAA +
Preference number: 2 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLTAHTS*HRFKGQ
Trigger: TTGGCCTTTGAACCTGTGCCAGGAAGTGTGAGCTGT...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
3UTR-3UTR TCA 90 bp TGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGTCGGGAAGGTCCTTGGGTaGAATGTGCTATATGTGTAC +
Preference number: 2 (lower is better)
Translates to: CAQPEALLLNLQAYFLSVGKVLG*NVLYVY
Trigger: GTACACATATAGCACATTTCACCCAAGGACCTTCCC...GACAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
3UTR-3UTR GCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGTCACTTCTAGCCCCTTaGTGTAACAGCTCACACTTC +
Preference number: 2 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLSLLAP*CNSSHF
Trigger: GAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGA...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
3UTR-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGATGTGTACTTGGGTATaGCTTAGGAAGGCCAGAGTT +
Preference number: 2 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLMCTWV*LRKARV
Trigger: AACTCTGGCCTTCCTAAGCCATACCCAAGTACACAT...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
3UTR-3UTR CCA 90 bp ACTGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGATGTGTACTTGGGTATaGCTTAGGAAGGCCAGAGTT +
Preference number: 2 (lower is better)
Translates to: TVLSRKPYFLTYKPTSSLMCTWV*LRKARV
Trigger: AACTCTGGCCTTCCTAAGCCATACCCAAGTACACAT...CAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
3UTR-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATGGGAAAGATTTTTCTaGAGCAGTGAGGCTAATGGG +
Preference number: 2 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGWERFF*SSEANG
Trigger: CCCATTAGCCTCACTGCTTCAGAAAAATCTTTCCCA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
3UTR-3UTR TCA 90 bp CCTCCTGCAATAGGCTCACTCCCCAGGCCCAAGAGTTATGATCTTAAACAGACTTGGGAAAGATTTTTCTaGAGCAGTGAGGCTAATGGG +
Preference number: 2 (lower is better)
Translates to: PPAIGSLPRPKSYDLKQTWERFF*SSEANG
Trigger: CCCATTAGCCTCACTGCTTCAGAAAAATCTTTCCCA...AGTCTGTTTAAGATCATAACTCTTGGGCCTGGGGAGTGAGCCTATTGCAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550065.1
3UTR-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAGGGAAGGTCCTTGGGTaGAATGTGCTATATGTGTAC +
Preference number: 2 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQGKVLG*NVLYVY
Trigger: GTACACATATAGCACATTTCACCCAAGGACCTTCCC...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
3UTR-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAATGTGTACTTGGGTATaGCTTAGGAAGGCCAGAGTT +
Preference number: 2 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGMCTWV*LRKARV
Trigger: AACTCTGGCCTTCCTAAGCCATACCCAAGTACACAT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
3UTR-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTGGGAAAGATTTTTCTaGAGCAGTGAGGCTAATGGG +
Preference number: 2 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCWERFF*SSEANG
Trigger: CCCATTAGCCTCACTGCTTCAGAAAAATCTTTCCCA...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
3UTR-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAATGGGAAAGATTTTTCTaGAGCAGTGAGGCTAATGGG +
Preference number: 2 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQWERFF*SSEANG
Trigger: CCCATTAGCCTCACTGCTTCAGAAAAATCTTTCCCA...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
3UTR-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAATGTGTACTTGGGTATaGCTTAGGAAGGCCAGAGTT +
Preference number: 2 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQMCTWV*LRKARV
Trigger: AACTCTGGCCTTCCTAAGCCATACCCAAGTACACAT...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
3UTR-3UTR CCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCATGTGTACTTGGGTATaGCTTAGGAAGGCCAGAGTT +
Preference number: 2 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCMCTWV*LRKARV
Trigger: AACTCTGGCCTTCCTAAGCCATACCCAAGTACACAT...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
3UTR-3UTR GCA 90 bp TTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCAAAAAGGGAGACGGTTGTaGCCCTTGCTCTCAGCTCAC +
Preference number: 2 (lower is better)
Translates to: FWSNLIIHPSTNASFLLQKGRRL*PLLSAH
Trigger: GTGAGCTGAGAGCAAGGGGCACAACCGTCTCCCTTT...TTGCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550065.1
3UTR-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTGTGATCCAAGAAGTTaGAAGGTGGGAAAGATTTTT +
Preference number: 2 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCCDPRS*KVGKIF
Trigger: AAAAATCTTTCCCACCTTTCAACTTCTTGGATCACA...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
3UTR CCA 72 bp TCTCATATGCCAGCAGGACCTCAGCTTCAGGGTCCATaGCCCGAGCCAGAGGGATGGATGCTCCATAGGCAG +
Preference number: 3 (lower is better)
Translates to: SHMPAGPQLQGP*PEPEGWMLHRQ
Trigger: CTGCCTATGGAGCATCCATCCCTCTGGCTCGGGCCATGGACCCTGAAGCTGAGGTCCTGCTGGCATATGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
3UTR CCA 72 bp AGACGGTTGTGCCCCTTGCTCTCAGCTCACACTTCCTaGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACA +
Preference number: 3 (lower is better)
Translates to: RRLCPLLSAHTS*HRFKGQEGYVT
Trigger: TGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAGGAAGTGTGAGCTGAGAGCAAGGGGCACAACCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550065.1
3UTR-3UTR CAA 90 bp ACTGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGTATAAAGGGAGACGGTaGTGCCCCTTGCTCTCAGCT +
Preference number: 3 (lower is better)
Translates to: TVLSRKPYFLTYKPTSSLYKGRR*CPLLSA
Trigger: AGCTGAGAGCAAGGGGCACAACCGTCTCCCTTTATA...CAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
3UTR-3UTR CAA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGAAAGAGGGAAGGTCCTaGGGTGAAATGTGCTATATG +
Preference number: 3 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLKEGRS*GEMCYM
Trigger: CATATAGCACATTTCACCCAAGGACCTTCCCTCTTT...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
3UTR-3UTR CAA 90 bp TGTTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCAGACGGTTGTGCCCCTaGCTCTCAGCTCACACTTCC +
Preference number: 3 (lower is better)
Translates to: CFGLISLYIPVQMHPSSCRRLCP*LSAHTS
Trigger: GGAAGTGTGAGCTGAGAGCAAGGGGCACAACCGTCT...GCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550065.1
3UTR-3UTR CAA 90 bp TGTTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCAAAGAGGGAAGGTCCTaGGGTGAAATGTGCTATATG +
Preference number: 3 (lower is better)
Translates to: CFGLISLYIPVQMHPSSCKEGRS*GEMCYM
Trigger: CATATAGCACATTTCACCCAAGGACCTTCCCTCTTT...GCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp GGCCAGCCTGGGCTAACACATCACAGAGCCGTGCCCCAGCCCAGCGTGCAGTGCCGCACAGGGAAGCCGTaGTCACGTGGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GQPGLTHHRAVPQPSVQCRTGKP*SRGRGC
Trigger: GCAGCCTCTGCCACGTGACCACGGCTTCCCTGTGCG...GCACTGCACGCTGGGCTGGGGCACGGCTCTGTGATGTGTTAGCCCAGGCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR TCA 90 bp GGCGGGCACCCACCACTCCAGGAACCACCACACGCACAGGGAAGCCGTGGTCACTATCACCAGAGAAGGTaGGGCTGGGGCGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GGHPPLQEPPHAQGSRGHYHQRR*GWGAGA
Trigger: AGCCCCAGCGCCCCAGCCTCACCTTCTCTGGTGATA...GTGACCACGGCTTCCCTGTGCGTGTGGTGGTTCCTGGAGTGGTGGGTGCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR GCA 90 bp GGCGGGCACCCACCACTCCAGGAACCACCACACGCACAGGGAAGCCGTGGTCACTGCCCCAGCCCAGCGTaGAGTGCTGATGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GGHPPLQEPPHAQGSRGHCPSPA*SADGSC
Trigger: ACAGGAGCCATCAGCACTGCACGCTGGGCTGGGGCA...GTGACCACGGCTTCCCTGTGCGTGTGGTGGTTCCTGGAGTGGTGGGTGCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR GCA 90 bp GGCGGGCACCCACCACTCCAGGAACCACCACACGCACAGGGAAGCCGTGGTCACCACATCACAGAGCCGTaGCCCAGCCCAGCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GGHPPLQEPPHAQGSRGHHITEP*PSPACS
Trigger: ACTGCACGCTGGGCTGGGGCACGGCTCTGTGATGTG...GTGACCACGGCTTCCCTGTGCGTGTGGTGGTTCCTGGAGTGGTGGGTGCCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR CCA 90 bp GGCGGGCACCCACCACTCCAGGAACCACCACACGCACAGGGAAGCCGTGGTCACCAGCTTCAGGGTCCATaGCCCGAGCCAGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: GGHPPLQEPPHAQGSRGHQLQGP*PEPEGW
Trigger: CCATCCCTCTGGCTCGGGCCATGGACCCTGAAGCTG...GTGACCACGGCTTCCCTGTGCGTGTGGTGGTTCCTGGAGTGGTGGGTGCCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR TCA 90 bp AGCTTCAGGGTCCATGGCCCGAGCCAGAGGGATGGATGCTCCATAGGCAGTCCCAGGCCTGTTGGAGCCTaGGGACCACAGCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: SFRVHGPSQRDGCSIGSPRPVGA*GPQLCA
Trigger: TGCACAGAGCTGTGGTCCTCAGGCTCCAACAGGCCT...GGGACTGCCTATGGAGCATCCATCCCTCTGGCTCGGGCCATGGACCCTGAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR TCA 90 bp TGGCGGGCACCCACCACTCCAGGAACCACCACACGCACAGGGAAGCCGTGGTCACTGGGGCGCTGGGGCTaGAATGAATCATTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: WRAPTTPGTTTRTGKPWSLGRWG*NESFVE
Trigger: CTCCACAAATGATTCATTTCAGCCCCAGCGCCCCAG...TGACCACGGCTTCCCTGTGCGTGTGGTGGTTCCTGGAGTGGTGGGTGCCCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR TCA 90 bp CACCCACCACTCCAGGAACCACCACACGCACAGGGAAGCCGTGGTCACGTGGCAATGTGTGTTGACTCCTaGGCAGCCCTACACCGATGG +
Preference number: 4 (lower is better)
Translates to: HPPLQEPPHAQGSRGHVAMCVDS*AALHRW
Trigger: CCATCGGTGTAGGGCTGCTCAGGAGTCAACACACAT...TGCCACGTGACCACGGCTTCCCTGTGCGTGTGGTGGTTCCTGGAGTGGTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR TCA 90 bp TCATCTCATATGCCAGCAGGACCTCAGCTTCAGGGTCCATGGCCCGAGCCAGAGCTCTGCCCAGCCATTTaGCATGGCGGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: SSHMPAGPQLQGPWPEPELCPAI*HGGHPP
Trigger: TGGTGGGTGCCCGCCATGTCAAATGGCTGGGCAGAG...CTCTGGCTCGGGCCATGGACCCTGAAGCTGAGGTCCTGCTGGCATATGAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR CCA 90 bp GCCCCAGCCCAGCGTGCAGTGCTGATGGCTCCTGTTCTCCACTCCAGACCTTTTCCCGAGCCAGAGGGATaGATGCTCCATAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: APAQRAVLMAPVLHSRPFPEPEG*MLHRQS
Trigger: GGACTGCCTATGGAGCATCCATCCCTCTGGCTCGGG...AAAAGGTCTGGAGTGGAGAACAGGAGCCATCAGCACTGCACGCTGGGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR CCA 90 bp GGCACCCACCACTCCAGGAACCACCACACGCACAGGGAAGCCGTGGTCACGTGGGCTGTAACTTTCCTCTaGCTGCACACTCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: GTHHSRNHHTHREAVVTWAVTFL*LHTHSA
Trigger: GGCAGAGTGAGTGTGCAGCCAGAGGAAAGTTACAGC...CCACGTGACCACGGCTTCCCTGTGCGTGTGGTGGTTCCTGGAGTGGTGGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR TCA 90 bp TCATCTCATATGCCAGCAGGACCTCAGCTTCAGGGTCCATGGCCCGAGCCAGAGCCCAGCGTGCAGTGCTaGTGGCTCCTGTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: SSHMPAGPQLQGPWPEPEPSVQC*WLLFST
Trigger: AGTGGAGAACAGGAGCCATCAGCACTGCACGCTGGG...CTCTGGCTCGGGCCATGGACCCTGAAGCTGAGGTCCTGCTGGCATATGAGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR GCA 90 bp TTGACATGGCGGGCACCCACCACTCCAGGAACCACCACACGCACAGGGAAGCCGTGGAGCAGGCCTGAATaGAGATCCTTGAGGGGATTG +
Preference number: 4 (lower is better)
Translates to: LTWRAPTTPGTTTRTGKPWSRPE*RSLRGL
Trigger: CAATCCCCTCAAGGATCTGCATTCAGGCCTGCTCCA...CGGCTTCCCTGTGCGTGTGGTGGTTCCTGGAGTGGTGGGTGCCCGCCATGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR GCA 90 bp CATCTCATATGCCAGCAGGACCTCAGCTTCAGGGTCCATGGCCCGAGCCAGAGGCGGTTGCCGGCACACTaGAGAGTGACTGTGATCTCG +
Preference number: 4 (lower is better)
Translates to: HLICQQDLSFRVHGPSQRRLPAH*RVTVIS
Trigger: CGAGATCACAGTCACTCTGCAGTGTGCCGGCAACCG...CCTCTGGCTCGGGCCATGGACCCTGAAGCTGAGGTCCTGCTGGCATATGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR CCA 90 bp GGCACCCACCACTCCAGGAACCACCACACGCACAGGGAAGCCGTGGTCACGTGGATGACTCTCCATCCCTaGGTGCTGGAGTTATCACCA +
Preference number: 4 (lower is better)
Translates to: GTHHSRNHHTHREAVVTWMTLHP*VLELSP
Trigger: TGGTGATAACTCCAGCACCCAGGGATGGAGAGTCAT...CCACGTGACCACGGCTTCCCTGTGCGTGTGGTGGTTCCTGGAGTGGTGGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR CCA 90 bp AGCTTCAGGGTCCATGGCCCGAGCCAGAGGGATGGATGCTCCATAGGCAGTCCCAGTTGGTGGCCAGCCTaGGCTAACACATCACAGAGC +
Preference number: 4 (lower is better)
Translates to: SFRVHGPSQRDGCSIGSPSWWPA*ANTSQS
Trigger: GCTCTGTGATGTGTTAGCCCAGGCTGGCCACCAACT...GGGACTGCCTATGGAGCATCCATCCCTCTGGCTCGGGCCATGGACCCTGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR TCA 90 bp GGCACCCACCACTCCAGGAACCACCACACGCACAGGGAAGCCGTGGTCACGTGGTTTACTTCTTTGACCTaGGTCATCTCAGAGCGTCGG +
Preference number: 4 (lower is better)
Translates to: GTHHSRNHHTHREAVVTWFTSLT*VISERR
Trigger: CCGACGCTCTGAGATGACTCAGGTCAAAGAAGTAAA...CCACGTGACCACGGCTTCCCTGTGCGTGTGGTGGTTCCTGGAGTGGTGGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGAGGGCCGCTGGCTGTTaGCCTTCAGGGCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLRAAGC*PSGLGD
Trigger: GTCACCCAGCCCTGAAGGTCAACAGCCAGCGGCCCT...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR TCA 90 bp TGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGTCAGGGCCGCTGGCTGTTaGCCTTCAGGGCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: CAQPEALLLNLQAYFLSVRAAGC*PSGLGD
Trigger: GTCACCCAGCCCTGAAGGTCAACAGCCAGCGGCCCT...GACAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR GCA 90 bp GCCCCAGCCCAGCGTGCAGTGCTGATGGCTCCTGTTCTCCACTCCAGACCTTTTCTCTCCATCCCTGGGTaGTGGAGTTATCACCAGAGA +
Preference number: 4 (lower is better)
Translates to: APAQRAVLMAPVLHSRPFLSIPG*WSYHQR
Trigger: TCTCTGGTGATAACTCCAGCACCCAGGGATGGAGAG...AAAAGGTCTGGAGTGGAGAACAGGAGCCATCAGCACTGCACGCTGGGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR GCA 90 bp TCTCATATGCCAGCAGGACCTCAGCTTCAGGGTCCATGGCCCGAGCCAGAGGGATCACGTGGCAGAGGCTaGCCATTCATCTCATATGCC +
Preference number: 4 (lower is better)
Translates to: SHMPAGPQLQGPWPEPEGSRGRG*PFISYA
Trigger: GGCATATGAGATGAATGGGCAGCCTCTGCCACGTGA...TCCCTCTGGCTCGGGCCATGGACCCTGAAGCTGAGGTCCTGCTGGCATATGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACTGCCACAGACGCCATaGCCAGGCCTTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGLPQTP*PGLPGA
Trigger: CGCCCCAGGAAGGCCTGGGCATGGCGTCTGTGGCAG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGCGCACAGGGAAGCCGTaGTCACGTGGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLRTGKP*SRGRGC
Trigger: GCAGCCTCTGCCACGTGACCACGGCTTCCCTGTGCG...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CCA 90 bp ACTGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGCGCACAGGGAAGCCGTaGTCACGTGGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TVLSRKPYFLTYKPTSSLRTGKP*SRGRGC
Trigger: GCAGCCTCTGCCACGTGACCACGGCTTCCCTGTGCG...CAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp TGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGTCTATCACCAGAGAAGGTaGGGCTGGGGCGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: CAQPEALLLNLQAYFLSVYHQRR*GWGAGA
Trigger: AGCCCCAGCGCCCCAGCCTCACCTTCTCTGGTGATA...GACAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp TCTCATATGCCAGCAGGACCTCAGCTTCAGGGTCCATGGCCCGAGCCAGAGGGATGGACAGGAAGTTCCTaGATGGATGGAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: SHMPAGPQLQGPWPEPEGWTGSS*MDGAES
Trigger: TGACTCTGCTCCATCCATTCAGGAACTTCCTGTCCA...TCCCTCTGGCTCGGGCCATGGACCCTGAAGCTGAGGTCCTGCTGGCATATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR GCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGCACATCACAGAGCCGTaGCCCAGCCCAGCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLHITEP*PSPACS
Trigger: ACTGCACGCTGGGCTGGGGCACGGCTCTGTGATGTG...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR GCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCCTGCCACAGACGCCATaGCCAGGCCTTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCLPQTP*PGLPGA
Trigger: CGCCCCAGGAAGGCCTGGGCATGGCGTCTGTGGCAG...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACTGCCACAGACGCCATaGCCAGGCCTTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQLPQTP*PGLPGA
Trigger: CGCCCCAGGAAGGCCTGGGCATGGCGTCTGTGGCAG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGCAGCTTCAGGGTCCATaGCCCGAGCCAGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLQLQGP*PEPEGW
Trigger: CCATCCCTCTGGCTCGGGCCATGGACCCTGAAGCTG...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACGCACAGGGAAGCCGTaGTCACGTGGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGRTGKP*SRGRGC
Trigger: GCAGCCTCTGCCACGTGACCACGGCTTCCCTGTGCG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGAGGCCTGTTGGAGCCTaGGGACCACAGCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLRPVGA*GPQLCA
Trigger: TGCACAGAGCTGTGGTCCTCAGGCTCCAACAGGCCT...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATATCACCAGAGAAGGTaGGGCTGGGGCGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGYHQRR*GWGAGA
Trigger: AGCCCCAGCGCCCCAGCCTCACCTTCTCTGGTGATA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAAGGGCCGCTGGCTGTTaGCCTTCAGGGCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQRAAGC*PSGLGD
Trigger: GTCACCCAGCCCTGAAGGTCAACAGCCAGCGGCCCT...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACTCTGCCCAGCCATTTaGCATGGCGGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGLCPAI*HGGHPP
Trigger: TGGTGGGTGCCCGCCATGTCAAATGGCTGGGCAGAG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACATCCCGGGGCTCTGTaGTGGCCGACTGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGHPGAL*WPTGQE
Trigger: TTCCTGTCCAGTCGGCCATCACAGAGCCCCGGGATG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp CCTCCTGCAATAGGCTCACTCCCCAGGCCCAAGAGTTATGATCTTAAACAGACTCATCCCGGGGCTCTGTaGTGGCCGACTGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: PPAIGSLPRPKSYDLKQTHPGAL*WPTGQE
Trigger: TTCCTGTCCAGTCGGCCATCACAGAGCCCCGGGATG...AGTCTGTTTAAGATCATAACTCTTGGGCCTGGGGAGTGAGCCTATTGCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR GCA 90 bp TCTCATATGCCAGCAGGACCTCAGCTTCAGGGTCCATGGCCCGAGCCAGAGGGATGTAGCAGACCTCAATaGCAGCAGCCTGTTTGTACT +
Preference number: 4 (lower is better)
Translates to: SHMPAGPQLQGPWPEPEGCSRPQ*QQPVCT
Trigger: AGTACAAACAGGCTGCTGGCATTGAGGTCTGCTACA...TCCCTCTGGCTCGGGCCATGGACCCTGAAGCTGAGGTCCTGCTGGCATATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR GCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGCTCAGGGGGAGGCTCTaGATTAAAGGGCCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLLRGRL*IKGPLA
Trigger: AGCCAGCGGCCCTTTAATGCAGAGCCTCCCCCTGAG...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR GCA 90 bp TGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGTCCTCAGGGGGAGGCTCTaGATTAAAGGGCCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: CAQPEALLLNLQAYFLSVLRGRL*IKGPLA
Trigger: AGCCAGCGGCCCTTTAATGCAGAGCCTCCCCCTGAG...GACAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATGCCCCAGCCCAGCGTaGAGTGCTGATGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGCPSPA*SADGSC
Trigger: ACAGGAGCCATCAGCACTGCACGCTGGGCTGGGGCA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACACATCACAGAGCCGTaGCCCAGCCCAGCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGHITEP*PSPACS
Trigger: ACTGCACGCTGGGCTGGGGCACGGCTCTGTGATGTG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CCTCCTGCAATAGGCTCACTCCCCAGGCCCAAGAGTTATGATCTTAAACAGACTCACATCACAGAGCCGTaGCCCAGCCCAGCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PPAIGSLPRPKSYDLKQTHITEP*PSPACS
Trigger: ACTGCACGCTGGGCTGGGGCACGGCTCTGTGATGTG...AGTCTGTTTAAGATCATAACTCTTGGGCCTGGGGAGTGAGCCTATTGCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR GCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGTCCAGCTTAGCCACCTaGCAGGTTAGGCCCCCATCC +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLSSLAT*QVRPPS
Trigger: GGATGGGGGCCTAACCTGGCAGGTGGCTAAGCTGGA...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGCCCGAGCCAGAGGGATaGATGCTCCATAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLPEPEG*MLHRQS
Trigger: GGACTGCCTATGGAGCATCCATCCCTCTGGCTCGGG...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACAGCTTCAGGGTCCATaGCCCGAGCCAGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGQLQGP*PEPEGW
Trigger: CCATCCCTCTGGCTCGGGCCATGGACCCTGAAGCTG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp CCTCCTGCAATAGGCTCACTCCCCAGGCCCAAGAGTTATGATCTTAAACAGACTCAGCTTCAGGGTCCATaGCCCGAGCCAGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: PPAIGSLPRPKSYDLKQTQLQGP*PEPEGW
Trigger: CCATCCCTCTGGCTCGGGCCATGGACCCTGAAGCTG...AGTCTGTTTAAGATCATAACTCTTGGGCCTGGGGAGTGAGCCTATTGCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACGCACAGGGAAGCCGTaGTCACGTGGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQRTGKP*SRGRGC
Trigger: GCAGCCTCTGCCACGTGACCACGGCTTCCCTGTGCG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCCGCACAGGGAAGCCGTaGTCACGTGGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCRTGKP*SRGRGC
Trigger: GCAGCCTCTGCCACGTGACCACGGCTTCCCTGTGCG...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGCCCTCAGCCATTGGCTaGAAGCGGGTGGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLPSAIG*KRVAQP
Trigger: TGGTTGAGCCACCCGCTTCCAGCCAATGGCTGAGGG...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356124.8
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGCCTGTTGGAGCCTaGGGACCACAGCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGRPVGA*GPQLCA
Trigger: TGCACAGAGCTGTGGTCCTCAGGCTCCAACAGGCCT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATCACCAGAGAAGGTaGGGCTGGGGCGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCYHQRR*GWGAGA
Trigger: AGCCCCAGCGCCCCAGCCTCACCTTCTCTGGTGATA...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp CATCTCATATGCCAGCAGGACCTCAGCTTCAGGGTCCATGGCCCGAGCCAGAGGGACCTTTTACTTCTTTaGCCTGAGTCATCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: HLICQQDLSFRVHGPSQRDLLLL*PESSQS
Trigger: GCTCTGAGATGACTCAGGTCAAAGAAGTAAAAGGTC...CCTCTGGCTCGGGCCATGGACCCTGAAGCTGAGGTCCTGCTGGCATATGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACCCAGCGTGCAGTGCTaGTGGCTCCTGTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGPSVQC*WLLFST
Trigger: AGTGGAGAACAGGAGCCATCAGCACTGCACGCTGGG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACTCTGCCCAGCCATTTaGCATGGCGGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQLCPAI*HGGHPP
Trigger: TGGTGGGTGCCCGCCATGTCAAATGGCTGGGCAGAG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCCTCTGCCCAGCCATTTaGCATGGCGGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCLCPAI*HGGHPP
Trigger: TGGTGGGTGCCCGCCATGTCAAATGGCTGGGCAGAG...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACATCCCGGGGCTCTGTaGTGGCCGACTGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQHPGAL*WPTGQE
Trigger: TTCCTGTCCAGTCGGCCATCACAGAGCCCCGGGATG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCCATCCCGGGGCTCTGTaGTGGCCGACTGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCHPGAL*WPTGQE
Trigger: TTCCTGTCCAGTCGGCCATCACAGAGCCCCGGGATG...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGGATGCCAGGCATTGCTaGGAACACCTCGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLDARHC*EHLAGS
Trigger: GGAACCTGCGAGGTGTTCTCAGCAATGCCTGGCATC...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR GCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGGGAGGGACAGCCTTTTaGGGGTCCAGTGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLGGTAF*GSSVFS
Trigger: GCTGAAGACACTGGACCCGCAAAAGGCTGTCCCTCC...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266971.8
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACTCAGGGGGAGGCTCTaGATTAAAGGGCCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGLRGRL*IKGPLA
Trigger: AGCCAGCGGCCCTTTAATGCAGAGCCTCCCCCTGAG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGTCCGGTTGCCGGCACACTaGAGAGTGACTGTGATCTCG +
Preference number: 4 (lower is better)
Translates to: CAQPEALLLNLQAYFLSVRLPAH*RVTVIS
Trigger: CGAGATCACAGTCACTCTGCAGTGTGCCGGCAACCG...GACAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR GCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTGCCCCAGCCCAGCGTaGAGTGCTGATGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCCPSPA*SADGSC
Trigger: ACAGGAGCCATCAGCACTGCACGCTGGGCTGGGGCA...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATCCAGCTTAGCCACCTaGCAGGTTAGGCCCCCATCC +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGSSLAT*QVRPPS
Trigger: GGATGGGGGCCTAACCTGGCAGGTGGCTAAGCTGGA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGCAGAGGTCTCCACGGTaGGGGCTACCTTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLQRSPR*GLPCLQ
Trigger: CTGAAGACAAGGTAGCCCCCACCGTGGAGACCTCTG...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACCCGAGCCAGAGGGATaGATGCTCCATAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGPEPEG*MLHRQS
Trigger: GGACTGCCTATGGAGCATCCATCCCTCTGGCTCGGG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACAGCTTCAGGGTCCATaGCCCGAGCCAGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQQLQGP*PEPEGW
Trigger: CCATCCCTCTGGCTCGGGCCATGGACCCTGAAGCTG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGGAAGCCGTGGTCACGTaGCAGAGGCTGCCCATTCAT +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLEAVVT*QRLPIH
Trigger: ATGAATGGGCAGCCTCTGCCACGTGACCACGGCTTC...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CCA 90 bp CCAGCGTGCAGTGCTGATGGCTCCTGTTCTCCACTCCAGACCTTTTACTTCTTTGAAGCCGTGGTCACGTaGCAGAGGCTGCCCATTCAT +
Preference number: 4 (lower is better)
Translates to: PACSADGSCSPLQTFYFFEAVVT*QRLPIH
Trigger: ATGAATGGGCAGCCTCTGCCACGTGACCACGGCTTC...AAAGAAGTAAAAGGTCTGGAGTGGAGAACAGGAGCCATCAGCACTGCACGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGTTTGTGGAGCAGGCCTaGATGCAGATCCTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLFVEQA*MQILEG
Trigger: CCCCTCAAGGATCTGCATTCAGGCCTGCTCCACAAA...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR TCA 90 bp CCAGCGTGCAGTGCTGATGGCTCCTGTTCTCCACTCCAGACCTTTTACTTCTTTGCGCTGGGGCTGAAATaGATCATTTGTGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PACSADGSCSPLQTFYFFALGLK*IICGAG
Trigger: GCCTGCTCCACAAATGATTCATTTCAGCCCCAGCGC...AAAGAAGTAAAAGGTCTGGAGTGGAGAACAGGAGCCATCAGCACTGCACGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGCTGGGGCGCTGGGGCTaGAATGAATCATTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLLGRWG*NESFVE
Trigger: CTCCACAAATGATTCATTTCAGCCCCAGCGCCCCAG...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR TCA 90 bp TGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGTCCTGGGGCGCTGGGGCTaGAATGAATCATTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: CAQPEALLLNLQAYFLSVLGRWG*NESFVE
Trigger: CTCCACAAATGATTCATTTCAGCCCCAGCGCCCCAG...GACAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGATGTGTGTTGACTCCTaGGCAGCCCTACACCGATGG +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLMCVDS*AALHRW
Trigger: CCATCGGTGTAGGGCTGCTCAGGAGTCAACACACAT...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGACCTTCAGGGCTGGGTaGCGTACAGGATCATCAGCA +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLTFRAG*RTGSSA
Trigger: TGCTGATGATCCTGTACGTCACCCAGCCCTGAAGGT...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGGAAAGAGACAGTGACTaGCCCCCAGGTGCTCCTACT +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLERDSD*PPGAPT
Trigger: AGTAGGAGCACCTGGGGGTCAGTCACTGTCTCTTTC...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACCCAGCGTGCAGTGCTaGTGGCTCCTGTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQPSVQC*WLLFST
Trigger: AGTGGAGAACAGGAGCCATCAGCACTGCACGCTGGG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAGATGCCAGGCATTGCTaGGAACACCTCGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGDARHC*EHLAGS
Trigger: GGAACCTGCGAGGTGTTCTCAGCAATGCCTGGCATC...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATTACCAGCCCAGCTCTaGGAGTTCTCGAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGLPAQL*EFSRRG
Trigger: GCCCCTTCTCGAGAACTCGCAGAGCTGGGCTGGTAA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266971.8
ENST00000356124.8
CDS-3UTR GCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACTCAGGGGGAGGCTCTaGATTAAAGGGCCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQLRGRL*IKGPLA
Trigger: AGCCAGCGGCCCTTTAATGCAGAGCCTCCCCCTGAG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCCTCAGGGGGAGGCTCTaGATTAAAGGGCCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCLRGRL*IKGPLA
Trigger: AGCCAGCGGCCCTTTAATGCAGAGCCTCCCCCTGAG...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGTCAGCCAGAGGGATGGATaGTCCATAGGCAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: CAQPEALLLNLQAYFLSVSQRDG*SIGSPS
Trigger: ACTGGGACTGCCTATGGAGCATCCATCCCTCTGGCT...GACAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR GCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAATCCAGCTTAGCCACCTaGCAGGTTAGGCCCCCATCC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQSSLAT*QVRPPS
Trigger: GGATGGGGGCCTAACCTGGCAGGTGGCTAAGCTGGA...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCTGCCACAGACGCCATaGCCAGGCCTTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCLPQTP*PGLPGA
Trigger: CGCCCCAGGAAGGCCTGGGCATGGCGTCTGTGGCAG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAACAGGGGCTTTCAACTaGCACAGACGCCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGTGAFN*HRRHAQ
Trigger: CTGGGCATGGCGTCTGTGGCAGTTGAAAGCCCCTGT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CCTCCTGCAATAGGCTCACTCCCCAGGCCCAAGAGTTATGATCTTAAACAGACTACAGGGGCTTTCAACTaGCACAGACGCCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: PPAIGSLPRPKSYDLKQTTGAFN*HRRHAQ
Trigger: CTGGGCATGGCGTCTGTGGCAGTTGAAAGCCCCTGT...AGTCTGTTTAAGATCATAACTCTTGGGCCTGGGGAGTGAGCCTATTGCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAGACGGTTGTGCCCCTTaGTCTCCTCGCAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGDGCAP*SPRNSL
Trigger: CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTC...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACAGAGGTCTCCACGGTaGGGGCTACCTTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGQRSPR*GLPCLQ
Trigger: CTGAAGACAAGGTAGCCCCCACCGTGGAGACCTCTG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGGCATTAAAGGGCCGCTaGCTGTTGACCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLALKGR*LLTFRA
Trigger: AGCCCTGAAGGTCAACAGCCAGCGGCCCTTTAATGC...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGAGTTGGTGGCCAGCCTaGGCTAACACATCACAGAGC +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLSWWPA*ANTSQS
Trigger: GCTCTGTGATGTGTTAGCCCAGGCTGGCCACCAACT...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACCCGAGCCAGAGGGATaGATGCTCCATAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQPEPEG*MLHRQS
Trigger: GGACTGCCTATGGAGCATCCATCCCTCTGGCTCGGG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCCCCGAGCCAGAGGGATaGATGCTCCATAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCPEPEG*MLHRQS
Trigger: GGACTGCCTATGGAGCATCCATCCCTCTGGCTCGGG...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAGAAGCCGTGGTCACGTaGCAGAGGCTGCCCATTCAT +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGEAVVT*QRLPIH
Trigger: ATGAATGGGCAGCCTCTGCCACGTGACCACGGCTTC...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACTGGGGCGCTGGGGCTaGAATGAATCATTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGLGRWG*NESFVE
Trigger: CTCCACAAATGATTCATTTCAGCCCCAGCGCCCCAG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAATGTGTGTTGACTCCTaGGCAGCCCTACACCGATGG +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGMCVDS*AALHRW
Trigger: CCATCGGTGTAGGGCTGCTCAGGAGTCAACACACAT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAACCTTCAGGGCTGGGTaGCGTACAGGATCATCAGCA +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGTFRAG*RTGSSA
Trigger: TGCTGATGATCCTGTACGTCACCCAGCCCTGAAGGT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAGAAAGAGACAGTGACTaGCCCCCAGGTGCTCCTACT +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGERDSD*PPGAPT
Trigger: AGTAGGAGCACCTGGGGGTCAGTCACTGTCTCTTTC...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAGATGCCAGGCATTGCTaGGAACACCTCGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQDARHC*EHLAGS
Trigger: GGAACCTGCGAGGTGTTCTCAGCAATGCCTGGCATC...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGGACAGCCTAAATGGGTaGAGAAGCCCAGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLDSLNG*RSPDSG
Trigger: CCCAGAATCTGGGCTTCTTCACCCATTTAGGCTGTC...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCGGCGGGCAAATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCGGQIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATTTGCCCGCC...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548274.5
CDS-3UTR GCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGTGGAGCAGGCCTGAATaGAGATCCTTGAGGGGATTG +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLWSRPE*RSLRGL
Trigger: CAATCCCCTCAAGGATCTGCATTCAGGCCTGCTCCA...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR GCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACGGTTGCCGGCACACTaGAGAGTGACTGTGATCTCG +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQRLPAH*RVTVIS
Trigger: CGAGATCACAGTCACTCTGCAGTGTGCCGGCAACCG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCCGGTTGCCGGCACACTaGAGAGTGACTGTGATCTCG +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCRLPAH*RVTVIS
Trigger: CGAGATCACAGTCACTCTGCAGTGTGCCGGCAACCG...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGCCAGAGGGATGGATaGTCCATAGGCAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGSQRDG*SIGSPS
Trigger: ACTGGGACTGCCTATGGAGCATCCATCCCTCTGGCT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAACAGGGGCTTTCAACTaGCACAGACGCCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQTGAFN*HRRHAQ
Trigger: CTGGGCATGGCGTCTGTGGCAGTTGAAAGCCCCTGT...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCACAGGGGCTTTCAACTaGCACAGACGCCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCTGAFN*HRRHAQ
Trigger: CTGGGCATGGCGTCTGTGGCAGTTGAAAGCCCCTGT...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGGGTGGCTCCTTTCCATaGTCATGGGGAGACATAGAC +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLGGSFP*SWGDID
Trigger: GTCTATGTCTCCCCATGAGCATGGAAAGGAGCCACC...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR GCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCGACGGTTGTGCCCCTTaGTCTCCTCGCAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCDGCAP*SPRNSL
Trigger: CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTC...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAAAGGGAGACGGTTGTaGCCCTTGCTCTCCTCGCAA +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGKGRRL*PLLSSQ
Trigger: TTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGTCCATCCCTGGGTGCTaGAGTTATCACCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLSIPGC*SYHQRR
Trigger: CCTTCTCTGGTGATAACTCCAGCACCCAGGGATGGA...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCCAGAGGTCTCCACGGTaGGGGCTACCTTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCQRSPR*GLPCLQ
Trigger: CTGAAGACAAGGTAGCCCCCACCGTGGAGACCTCTG...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACAGAGGTCTCCACGGTaGGGGCTACCTTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQQRSPR*GLPCLQ
Trigger: CTGAAGACAAGGTAGCCCCCACCGTGGAGACCTCTG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAGCATTAAAGGGCCGCTaGCTGTTGACCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGALKGR*LLTFRA
Trigger: AGCCCTGAAGGTCAACAGCCAGCGGCCCTTTAATGC...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGTTGGTGGCCAGCCTaGGCTAACACATCACAGAGC +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGSWWPA*ANTSQS
Trigger: GCTCTGTGATGTGTTAGCCCAGGCTGGCCACCAACT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAGAAGCCGTGGTCACGTaGCAGAGGCTGCCCATTCAT +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQEAVVT*QRLPIH
Trigger: ATGAATGGGCAGCCTCTGCCACGTGACCACGGCTTC...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGGCTGTAACTTTCCTCTaGCTGCACACTCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLAVTFL*LHTHSA
Trigger: GGCAGAGTGAGTGTGCAGCCAGAGGAAAGTTACAGC...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATGGGGCCACGGTGTCTaGCTGCACATTGTAACCATC +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGWGHGV*LHIVTI
Trigger: GATGGTTACAATGTGCAGCCAGACACCGTGGCCCCA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGCTCCTCGCAACTCTCTaGCAACCTGGAGAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLLLATL*QPGEVV
Trigger: TACTACCTCTCCAGGTTGCCAGAGAGTTGCGAGGAG...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCACTGTGCTGACAGGATaGCAGGTAATGCGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCTVLTG*QVMRVG
Trigger: CCCCACCCGCATTACCTGCCATCCTGTCAGCACAGT...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAGCGCTGGGGCTGAAATaGATCATTTGTGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQALGLK*IICGAG
Trigger: GCCTGCTCCACAAATGATTCATTTCAGCCCCAGCGC...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCGCGCTGGGGCTGAAATaGATCATTTGTGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCALGLK*IICGAG
Trigger: GCCTGCTCCACAAATGATTCATTTCAGCCCCAGCGC...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACTGGGGCGCTGGGGCTaGAATGAATCATTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQLGRWG*NESFVE
Trigger: CTCCACAAATGATTCATTTCAGCCCCAGCGCCCCAG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAATGTGTGTTGACTCCTaGGCAGCCCTACACCGATGG +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQMCVDS*AALHRW
Trigger: CCATCGGTGTAGGGCTGCTCAGGAGTCAACACACAT...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCATGTGTGTTGACTCCTaGGCAGCCCTACACCGATGG +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCMCVDS*AALHRW
Trigger: CCATCGGTGTAGGGCTGCTCAGGAGTCAACACACAT...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGTCCCCAATCTTGTACTaGGCCAGTAACTCACGCACA +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLSPILY*ASNSRT
Trigger: TGTGCGTGAGTTACTGGCTCAGTACAAGATTGGGGA...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAACCTTCAGGGCTGGGTaGCGTACAGGATCATCAGCA +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQTFRAG*RTGSSA
Trigger: TGCTGATGATCCTGTACGTCACCCAGCCCTGAAGGT...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAGAAAGAGACAGTGACTaGCCCCCAGGTGCTCCTACT +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQERDSD*PPGAPT
Trigger: AGTAGGAGCACCTGGGGGTCAGTCACTGTCTCTTTC...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCTCTGCCCAGCCATTTaGCATGGCGGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCLCPAI*HGGHPP
Trigger: TGGTGGGTGCCCGCCATGTCAAATGGCTGGGCAGAG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGTGGACAGGAAGTTCCTaGATGGATGGAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLWTGSS*MDGAES
Trigger: TGACTCTGCTCCATCCATTCAGGAACTTCCTGTCCA...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR TCA 90 bp TGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGTCTGGACAGGAAGTTCCTaGATGGATGGAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: CAQPEALLLNLQAYFLSVWTGSS*MDGAES
Trigger: TGACTCTGCTCCATCCATTCAGGAACTTCCTGTCCA...GACAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAGATGGTCACCTCCCCTaGTTCTACAGTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGDGHLP*FYSLSI
Trigger: GATGGAGAGACTGTAGAATCAGGGGAGGTGACCATC...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATGGAGCAGGCCTGAATaGAGATCCTTGAGGGGATTG +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGWSRPE*RSLRGL
Trigger: CAATCCCCTCAAGGATCTGCATTCAGGCCTGCTCCA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACTCTCCATCCCTGGGTaGTGGAGTTATCACCAGAGA +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGLSIPG*WSYHQR
Trigger: TCTCTGGTGATAACTCCAGCACCCAGGGATGGAGAG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CCTCCTGCAATAGGCTCACTCCCCAGGCCCAAGAGTTATGATCTTAAACAGACTCTCTCCATCCCTGGGTaGTGGAGTTATCACCAGAGA +
Preference number: 4 (lower is better)
Translates to: PPAIGSLPRPKSYDLKQTLSIPG*WSYHQR
Trigger: TCTCTGGTGATAACTCCAGCACCCAGGGATGGAGAG...AGTCTGTTTAAGATCATAACTCTTGGGCCTGGGGAGTGAGCCTATTGCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTTGCCCCAGCCCAGCGTaGAGTGCTGATGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCCPSPA*SADGSC
Trigger: ACAGGAGCCATCAGCACTGCACGCTGGGCTGGGGCA...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCACATCACAGAGCCGTaGCCCAGCCCAGCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCHITEP*PSPACS
Trigger: ACTGCACGCTGGGCTGGGGCACGGCTCTGTGATGTG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCAGCCAGAGGGATGGATaGTCCATAGGCAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCSQRDG*SIGSPS
Trigger: ACTGGGACTGCCTATGGAGCATCCATCCCTCTGGCT...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAGGTGGCTCCTTTCCATaGTCATGGGGAGACATAGAC +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGGGSFP*SWGDID
Trigger: GTCTATGTCTCCCCATGAGCATGGAAAGGAGCCACC...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CCTCCTGCAATAGGCTCACTCCCCAGGCCCAAGAGTTATGATCTTAAACAGACTGGTGGCTCCTTTCCATaGTCATGGGGAGACATAGAC +
Preference number: 4 (lower is better)
Translates to: PPAIGSLPRPKSYDLKQTGGSFP*SWGDID
Trigger: GTCTATGTCTCCCCATGAGCATGGAAAGGAGCCACC...AGTCTGTTTAAGATCATAACTCTTGGGCCTGGGGAGTGAGCCTATTGCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR GCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCAAAGGGAGACGGTTGTaGCCCTTGCTCTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCKGRRL*PLLSAH
Trigger: GTGAGCTGAGAGCAAGGGGCACAACCGTCTCCCTTT...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACCAGAATCCCAGGTTTaGGAGGGACAGCCTTTTGCG +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQPESQV*EGQPFA
Trigger: CGCAAAAGGCTGTCCCTCCCAAACCTGGGATTCTGG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266971.8
ENST00000394115.6
CDS-3UTR CCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCCCAGAATCCCAGGTTTaGGAGGGACAGCCTTTTGCG +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCPESQV*EGQPFA
Trigger: CGCAAAAGGCTGTCCCTCCCAAACCTGGGATTCTGG...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266971.8
ENST00000394115.6
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAGCATTAAAGGGCCGCTaGCTGTTGACCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQALKGR*LLTFRA
Trigger: AGCCCTGAAGGTCAACAGCCAGCGGCCCTTTAATGC...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAAGTTGGTGGCCAGCCTaGGCTAACACATCACAGAGC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQSWWPA*ANTSQS
Trigger: GCTCTGTGATGTGTTAGCCCAGGCTGGCCACCAACT...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGTTCCTTTTGTCCAGCTaGCACAGGGGCTTTCAACTG +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLFLLSS*HRGFQL
Trigger: CAGTTGAAAGCCCCTGTGCCAGCTGGACAAAAGGAA...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAATGGGGCCACGGTGTCTaGCTGCACATTGTAACCATC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQWGHGV*LHIVTI
Trigger: GATGGTTACAATGTGCAGCCAGACACCGTGGCCCCA...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTGGGGCCACGGTGTCTaGCTGCACATTGTAACCATC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCWGHGV*LHIVTI
Trigger: GATGGTTACAATGTGCAGCCAGACACCGTGGCCCCA...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACTCCTCGCAACTCTCTaGCAACCTGGAGAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGLLATL*QPGEVV
Trigger: TACTACCTCTCCAGGTTGCCAGAGAGTTGCGAGGAG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAATAGAGAACGATGCCTaGGGCGAAGGGCCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGIENDA*GEGPKG
Trigger: TCCTTTAGGCCCTTCGCCCCAGGCATCGTTCTCTAT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR CCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTGAAATTAGCCGGGCGTaGCGGTGTGCGCCTGTCGTC +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCEISRA*RCAPVV
Trigger: GACGACAGGCGCACACCGCCACGCCCGGCTAATTTC...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTAGGCCTGTTGGAGCCTaGGGACCACAGCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCRPVGA*GPQLCA
Trigger: TGCACAGAGCTGTGGTCCTCAGGCTCCAACAGGCCT...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGGGTCCACAAATTCTGTaGCATCAAAGACCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLGPQIL*HQRPQS
Trigger: GCTCTGAGGTCTTTGATGTCACAGAATTTGTGGACC...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR TCA 90 bp CCTCCTGCAATAGGCTCACTCCCCAGGCCCAAGAGTTATGATCTTAAACAGACTTCCCCAATCTTGTACTaGGCCAGTAACTCACGCACA +
Preference number: 4 (lower is better)
Translates to: PPAIGSLPRPKSYDLKQTSPILY*ASNSRT
Trigger: TGTGCGTGAGTTACTGGCTCAGTACAAGATTGGGGA...AGTCTGTTTAAGATCATAACTCTTGGGCCTGGGGAGTGAGCCTATTGCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGTTTACTTCTTTGACCTaGGTCATCTCAGAGCGTCGG +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLFTSLT*VISERR
Trigger: CCGACGCTCTGAGATGACTCAGGTCAAAGAAGTAAA...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCCCAGCGTGCAGTGCTaGTGGCTCCTGTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCPSVQC*WLLFST
Trigger: AGTGGAGAACAGGAGCCATCAGCACTGCACGCTGGG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATGGACAGGAAGTTCCTaGATGGATGGAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGWTGSS*MDGAES
Trigger: TGACTCTGCTCCATCCATTCAGGAACTTCCTGTCCA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCGATGGTCACCTCCCCTaGTTCTACAGTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCDGHLP*FYSLSI
Trigger: GATGGAGAGACTGTAGAATCAGGGGAGGTGACCATC...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGGGGAAGGTCCTTGGGTaGAATGTGCTATATGTGTAC +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLGKVLG*NVLYVY
Trigger: GTACACATATAGCACATTTCACCCAAGGACCTTCCC...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR TCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGTCCTCATCTCTGAAATaGCATCTGCCTAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLSSSLK*HLPSRA
Trigger: AGCTCTGCTAGGCAGATGTCATTTCAGAGATGAGGA...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCACCAGCCCGATTTCCTaGGCAAGATTCCAAGCCGTT +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCTSPIS*ARFQAV
Trigger: AACGGCTTGGAATCTTGCTCAGGAAATCGGGCTGGT...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCGCAAGTGAGGAGTCTTaGGAGTGGGAGTCCAAATGG +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCASEES*EWESKW
Trigger: CCATTTGGACTCCCACTCTCAAGACTCCTCACTTGC...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCAGCTTTCTGGGCAAGTaGGGAGTCTTGAGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCSFLGK*GVLRVG
Trigger: TCCCACTCTCAAGACTCCTCACTTGCCCAGAAAGCT...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR GCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGCAGTGTCTTCAGCACTaGAATTTTACCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLQCLQH*NFTSPA
Trigger: AGCTGGGCTGGTAAAATTGCAGTGCTGAAGACACTG...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000548274.5
CDS-3UTR GCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCCTCTCCATCCCTGGGTaGTGGAGTTATCACCAGAGA +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCLSIPG*WSYHQR
Trigger: TCTCTGGTGATAACTCCAGCACCCAGGGATGGAGAG...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACTCTCCATCCCTGGGTaGTGGAGTTATCACCAGAGA +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQLSIPG*WSYHQR
Trigger: TCTCTGGTGATAACTCCAGCACCCAGGGATGGAGAG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCTCAGGGGGAGGCTCTaGATTAAAGGGCCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCLRGRL*IKGPLA
Trigger: AGCCAGCGGCCCTTTAATGCAGAGCCTCCCCCTGAG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACCCATTCATCTCATATaGCAGCAGGACCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGPIHLI*QQDLSF
Trigger: GAAGCTGAGGTCCTGCTGGCATATGAGATGAATGGG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAATCACGTGGCAGAGGCTaGCCATTCATCTCATATGCC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQSRGRG*PFISYA
Trigger: GGCATATGAGATGAATGGGCAGCCTCTGCCACGTGA...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTCACGTGGCAGAGGCTaGCCATTCATCTCATATGCC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCSRGRG*PFISYA
Trigger: GGCATATGAGATGAATGGGCAGCCTCTGCCACGTGA...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAGGTGGCTCCTTTCCATaGTCATGGGGAGACATAGAC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQGGSFP*SWGDID
Trigger: GTCTATGTCTCCCCATGAGCATGGAAAGGAGCCACC...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAGACTCCGTCCCTCAATaGCAGCAGCCTGTTTGTACT +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQDSVPQ*QQPVCT
Trigger: AGTACAAACAGGCTGCTGGCATTGAGGGACGGAGTC...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394115.6
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAATCCATCCCTGGGTGCTaGAGTTATCACCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQSIPGC*SYHQRR
Trigger: CCTTCTCTGGTGATAACTCCAGCACCCAGGGATGGA...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAATGACTCTCCATCCCTaGGTGCTGGAGTTATCACCA +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGMTLHP*VLELSP
Trigger: TGGTGATAACTCCAGCACCCAGGGATGGAGAGTCAT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCGTTGACCTTCAGGGCTaGGTGACGTACAGGATCATC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCVDLQG*VTYRII
Trigger: GATGATCCTGTACGTCACCCAGCCCTGAAGGTCAAC...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAGCTGTAACTTTCCTCTaGCTGCACACTCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQAVTFL*LHTHSA
Trigger: GGCAGAGTGAGTGTGCAGCCAGAGGAAAGTTACAGC...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCGCTGTAACTTTCCTCTaGCTGCACACTCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCAVTFL*LHTHSA
Trigger: GGCAGAGTGAGTGTGCAGCCAGAGGAAAGTTACAGC...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp CCTCCTGCAATAGGCTCACTCCCCAGGCCCAAGAGTTATGATCTTAAACAGACTTTCCTTTTGTCCAGCTaGCACAGGGGCTTTCAACTG +
Preference number: 4 (lower is better)
Translates to: PPAIGSLPRPKSYDLKQTFLLSS*HRGFQL
Trigger: CAGTTGAAAGCCCCTGTGCCAGCTGGACAAAAGGAA...AGTCTGTTTAAGATCATAACTCTTGGGCCTGGGGAGTGAGCCTATTGCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGTCCTTTCCATGCTCATaGGGAGACATAGACATGGAC +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLSFPCS*GDIDMD
Trigger: GTCCATGTCTATGTCTCCCCATGAGCATGGAAAGGA...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAACAGCTCACACTTCCTaGCACAGGTTCAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGTAHTS*HRFKGQ
Trigger: TTGGCCTTTGAACCTGTGCCAGGAAGTGTGAGCTGT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACTCCTCGCAACTCTCTaGCAACCTGGAGAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQLLATL*QPGEVV
Trigger: TACTACCTCTCCAGGTTGCCAGAGAGTTGCGAGGAG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATACCCCCTTATCCACTaGGGATATGTTCTACGACCC +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGYPLIH*GYVLRP
Trigger: GGGTCGTAGAACATATCCCCAGTGGATAAGGGGGTA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATCAGCTCACACTTCCTaGCACAGGTTCAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGSAHTS*HRFKGQ
Trigger: TTGGCCTTTGAACCTGTGCCAGGAAGTGTGAGCTGA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAGGTCCACAAATTCTGTaGCATCAAAGACCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGGPQIL*HQRPQS
Trigger: GCTCTGAGGTCTTTGATGTCACAGAATTTGTGGACC...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAATCCCCAATCTTGTACTaGGCCAGTAACTCACGCACA +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQSPILY*ASNSRT
Trigger: TGTGCGTGAGTTACTGGCTCAGTACAAGATTGGGGA...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR TCA 90 bp TGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGTCGACCTTTTACTTCTTTaGCCTGAGTCATCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: CAQPEALLLNLQAYFLSVDLLLL*PESSQS
Trigger: GCTCTGAGATGACTCAGGTCAAAGAAGTAAAAGGTC...GACAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTGGACAGGAAGTTCCTaGATGGATGGAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCWTGSS*MDGAES
Trigger: TGACTCTGCTCCATCCATTCAGGAACTTCCTGTCCA...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAATGGACAGGAAGTTCCTaGATGGATGGAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQWTGSS*MDGAES
Trigger: TGACTCTGCTCCATCCATTCAGGAACTTCCTGTCCA...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTGATGCCAGGCATTGCTaGGAACACCTCGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCDARHC*EHLAGS
Trigger: GGAACCTGCGAGGTGTTCTCAGCAATGCCTGGCATC...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp ACTGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGTGGGAAAGATTTTTCTaGAGCAGTGAGGCTAATGGG +
Preference number: 4 (lower is better)
Translates to: TVLSRKPYFLTYKPTSSLWERFF*SSEANG
Trigger: CCCATTAGCCTCACTGCTTCAGAAAAATCTTTCCCA...CAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAGGGAAGGTCCTTGGGTaGAATGTGCTATATGTGTAC +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGGKVLG*NVLYVY
Trigger: GTACACATATAGCACATTTCACCCAAGGACCTTCCC...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACAGTGTCTTCAGCACTaGAATTTTACCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGQCLQH*NFTSPA
Trigger: AGCTGGGCTGGTAAAATTGCAGTGCTGAAGACACTG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTGGAGGGACAGCCTTTTaGGGGTCCAGTGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCGGTAF*GSSVFS
Trigger: GCTGAAGACACTGGACCCGCAAAAGGCTGTCCCTCC...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266971.8
ENST00000394115.6
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATGTAGCAGACCTCAATaGCAGCAGCCTGTTTGTACT +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGCSRPQ*QQPVCT
Trigger: AGTACAAACAGGCTGCTGGCATTGAGGTCTGCTACA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266971.8
CDS-3UTR GCA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGTACCTGGGAAAGTTGTaGAAGTCATCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLYLGKL*KSSRER
Trigger: TCTTTCCCTGGATGACTTGCACAACTTTCCCAGGTA...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCGGTTGCCGGCACACTaGAGAGTGACTGTGATCTCG +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCRLPAH*RVTVIS
Trigger: CGAGATCACAGTCACTCTGCAGTGTGCCGGCAACCG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACCCATTCATCTCATATaGCAGCAGGACCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQPIHLI*QQDLSF
Trigger: GAAGCTGAGGTCCTGCTGGCATATGAGATGAATGGG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCCCCATTCATCTCATATaGCAGCAGGACCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCPIHLI*QQDLSF
Trigger: GAAGCTGAGGTCCTGCTGGCATATGAGATGAATGGG...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATCACTTCTAGCCCCTTaGTGTAACAGCTCACACTTC +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGSLLAP*CNSSHF
Trigger: GAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTGACGGTTGTGCCCCTTaGTCTCCTCGCAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCDGCAP*SPRNSL
Trigger: CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTC...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAATGACTCTCCATCCCTaGGTGCTGGAGTTATCACCA +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQMTLHP*VLELSP
Trigger: TGGTGATAACTCCAGCACCCAGGGATGGAGAGTCAT...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCAGAGGTCTCCACGGTaGGGGCTACCTTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCQRSPR*GLPCLQ
Trigger: CTGAAGACAAGGTAGCCCCCACCGTGGAGACCTCTG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTGAAGCCGTGGTCACGTaGCAGAGGCTGCCCATTCAT +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCEAVVT*QRLPIH
Trigger: ATGAATGGGCAGCCTCTGCCACGTGACCACGGCTTC...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTTCCTTTTGTCCAGCTaGCACAGGGGCTTTCAACTG +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCFLLSS*HRGFQL
Trigger: CAGTTGAAAGCCCCTGTGCCAGCTGGACAAAAGGAA...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAATTCCTTTTGTCCAGCTaGCACAGGGGCTTTCAACTG +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQFLLSS*HRGFQL
Trigger: CAGTTGAAAGCCCCTGTGCCAGCTGGACAAAAGGAA...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp TGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGTCATGTGTACTTGGGTATaGCTTAGGAAGGCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: CAQPEALLLNLQAYFLSVMCTWV*LRKARV
Trigger: AACTCTGGCCTTCCTAAGCCATACCCAAGTACACAT...GACAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCACAGCTCACACTTCCTaGCACAGGTTCAAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCTAHTS*HRFKGQ
Trigger: TTGGCCTTTGAACCTGTGCCAGGAAGTGTGAGCTGT...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCGACACACTAGCACTTTaGGAGACCTACACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCDTLAL*ETYTGG
Trigger: TCCTCCTGTGTAGGTCTCCCAAAGTGCTAGTGTGTC...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394115.6
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAAAGAAGCCCAGATTCTaGGGGCAAAATGCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQKKPRF*GQNALG
Trigger: ACCCAAGGCATTTTGCCCCCAGAATCTGGGCTTCTT...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCTGGGGCGCTGGGGCTaGAATGAATCATTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCLGRWG*NESFVE
Trigger: CTCCACAAATGATTCATTTCAGCCCCAGCGCCCCAG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTATGTGTGTTGACTCCTaGGCAGCCCTACACCGATGG +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCMCVDS*AALHRW
Trigger: CCATCGGTGTAGGGCTGCTCAGGAGTCAACACACAT...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCGGTCCACAAATTCTGTaGCATCAAAGACCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCGPQIL*HQRPQS
Trigger: GCTCTGAGGTCTTTGATGTCACAGAATTTGTGGACC...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTACCTTCAGGGCTGGGTaGCGTACAGGATCATCAGCA +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCTFRAG*RTGSSA
Trigger: TGCTGATGATCCTGTACGTCACCCAGCCCTGAAGGT...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTGAAAGAGACAGTGACTaGCCCCCAGGTGCTCCTACT +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCERDSD*PPGAPT
Trigger: AGTAGGAGCACCTGGGGGTCAGTCACTGTCTCTTTC...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTTTACTTCTTTGACCTaGGTCATCTCAGAGCGTCGG +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCFTSLT*VISERR
Trigger: CCGACGCTCTGAGATGACTCAGGTCAAAGAAGTAAA...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCAACCCAGCGTGCAGTGCTaGTGGCTCCTGTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: FWSNLIIHPSTNASFLLQPSVQC*WLLFST
Trigger: AGTGGAGAACAGGAGCCATCAGCACTGCACGCTGGG...TTGCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCGGGAAGGTCCTTGGGTaGAATGTGCTATATGTGTAC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCGKVLG*NVLYVY
Trigger: GTACACATATAGCACATTTCACCCAAGGACCTTCCC...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATTGCTTCCTCATCTCTaGAATGACATCTGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGLLPHL*NDICLA
Trigger: TGCTAGGCAGATGTCATTTCAGAGATGAGGAAGCAA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR GCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACAGTGTCTTCAGCACTaGAATTTTACCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQQCLQH*NFTSPA
Trigger: AGCTGGGCTGGTAAAATTGCAGTGCTGAAGACACTG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATACCTGGGAAAGTTGTaGAAGTCATCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGYLGKL*KSSRER
Trigger: TCTTTCCCTGGATGACTTGCACAACTTTCCCAGGTA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTAGCCAGAGGGATGGATaGTCCATAGGCAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCSQRDG*SIGSPS
Trigger: ACTGGGACTGCCTATGGAGCATCCATCCCTCTGGCT...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAATCACTTCTAGCCCCTTaGTGTAACAGCTCACACTTC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQSLLAP*CNSSHF
Trigger: GAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGA...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTCACTTCTAGCCCCTTaGTGTAACAGCTCACACTTC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCSLLAP*CNSSHF
Trigger: GAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGA...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTAAAGGGAGACGGTTGTaGCCCTTGCTCTCCTCGCAA +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCKGRRL*PLLSSQ
Trigger: TTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTT...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp TGTTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCCAGAGGTCTCCACGGTaGGGGCTACCTTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: CFGLISLYIPVQMHPSSCQRSPR*GLPCLQ
Trigger: CTGAAGACAAGGTAGCCCCCACCGTGGAGACCTCTG...GCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp TGTTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCGAAGCCGTGGTCACGTaGCAGAGGCTGCCCATTCAT +
Preference number: 4 (lower is better)
Translates to: CFGLISLYIPVQMHPSSCEAVVT*QRLPIH
Trigger: ATGAATGGGCAGCCTCTGCCACGTGACCACGGCTTC...GCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTCCTTTCCATGCTCATaGGGAGACATAGACATGGAC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCSFPCS*GDIDMD
Trigger: GTCCATGTCTATGTCTCCCCATGAGCATGGAAAGGA...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAATCCTTTCCATGCTCATaGGGAGACATAGACATGGAC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQSFPCS*GDIDMD
Trigger: GTCCATGTCTATGTCTCCCCATGAGCATGGAAAGGA...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp TGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGTCAAGAGGGAAGGTCCTTaGGTGAAATGTGCTATATGT +
Preference number: 4 (lower is better)
Translates to: CAQPEALLLNLQAYFLSVKREGP*VKCAIC
Trigger: ACATATAGCACATTTCACCCAAGGACCTTCCCTCTT...GACAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTTTATCCCTCAGCCATTaGCTGGAAGCGGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCLSLSH*LEAGGS
Trigger: TGAGCCACCCGCTTCCAGCCAATGGCTGAGGGATAA...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356124.8
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAGGGGGCAAAATGCCTTaGGTTTGTGAAACTGGATCT +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQGGKMP*VCETGS
Trigger: AGATCCAGTTTCACAAACCCAAGGCATTTTGCCCCC...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAGAGTGGGAGTCCAAATaGGCCCTTAGAGAAAACTTG +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQEWESK*ALRENL
Trigger: CAAGTTTTCTCTAAGGGCCCATTTGGACTCCCACTC...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR TCA 90 bp TGTTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCACCTTCAGGGCTGGGTaGCGTACAGGATCATCAGCA +
Preference number: 4 (lower is better)
Translates to: CFGLISLYIPVQMHPSSCTFRAG*RTGSSA
Trigger: TGCTGATGATCCTGTACGTCACCCAGCCCTGAAGGT...GCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCGACCTTTTACTTCTTTaGCCTGAGTCATCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCDLLLL*PESSQS
Trigger: GCTCTGAGATGACTCAGGTCAAAGAAGTAAAAGGTC...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAGACCTTTTACTTCTTTaGCCTGAGTCATCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQDLLLL*PESSQS
Trigger: GCTCTGAGATGACTCAGGTCAAAGAAGTAAAAGGTC...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR TCA 90 bp TTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCAAGATGCCAGGCATTGCTaGGAACACCTCGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: FWSNLIIHPSTNASFLLQDARHC*EHLAGS
Trigger: GGAACCTGCGAGGTGTTCTCAGCAATGCCTGGCATC...TTGCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAATCCCATCTTCCATTCTaGACTTTGTCCACCATAGAG +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQSHLPF*TLSTIE
Trigger: CTCTATGGTGGACAAAGTTCAGAATGGAAGATGGGA...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTTGGAGCAGGCCTGAATaGAGATCCTTGAGGGGATTG +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCWSRPE*RSLRGL
Trigger: CAATCCCCTCAAGGATCTGCATTCAGGCCTGCTCCA...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCTCTCCATCCCTGGGTaGTGGAGTTATCACCAGAGA +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCLSIPG*WSYHQR
Trigger: TCTCTGGTGATAACTCCAGCACCCAGGGATGGAGAG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAATACCTGGGAAAGTTGTaGAAGTCATCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQYLGKL*KSSRER
Trigger: TCTTTCCCTGGATGACTTGCACAACTTTCCCAGGTA...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR GCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTACCTGGGAAAGTTGTaGAAGTCATCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCYLGKL*KSSRER
Trigger: TCTTTCCCTGGATGACTTGCACAACTTTCCCAGGTA...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTTCACGTGGCAGAGGCTaGCCATTCATCTCATATGCC +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCSRGRG*PFISYA
Trigger: GGCATATGAGATGAATGGGCAGCCTCTGCCACGTGA...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTGGTGGCTCCTTTCCATaGTCATGGGGAGACATAGAC +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCGGSFP*SWGDID
Trigger: GTCTATGTCTCCCCATGAGCATGGAAAGGAGCCACC...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCGAATTGCTTGAACTCTaGCTCCTTGGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCELLEL*LLGSSD
Trigger: ATCGCTTGAACCAAGGAGGCAGAGTTCAAGCAATTC...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTGTTGACCTTCAGGGCTaGGTGACGTACAGGATCATC +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCVDLQG*VTYRII
Trigger: GATGATCCTGTACGTCACCCAGCCCTGAAGGTCAAC...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTGCTGTAACTTTCCTCTaGCTGCACACTCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCAVTFL*LHTHSA
Trigger: GGCAGAGTGAGTGTGCAGCCAGAGGAAAGTTACAGC...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAAGAGGGAAGGTCCTTaGGTGAAATGTGCTATATGT +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGKREGP*VKCAIC
Trigger: ACATATAGCACATTTCACCCAAGGACCTTCCCTCTT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCTCCTCGCAACTCTCTaGCAACCTGGAGAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCLLATL*QPGEVV
Trigger: TACTACCTCTCCAGGTTGCCAGAGAGTTGCGAGGAG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTAAGATAGGGAGACCCTaGGAGGGGATATTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCKIGRP*EGILGR
Trigger: CCTCCCTAATATCCCCTCCCAGGGTCTCCCTATCTT...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTTCCCCAATCTTGTACTaGGCCAGTAACTCACGCACA +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCSPILY*ASNSRT
Trigger: TGTGCGTGAGTTACTGGCTCAGTACAAGATTGGGGA...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCAAGAAAGAGACAGTGACTaGCCCCCAGGTGCTCCTACT +
Preference number: 4 (lower is better)
Translates to: FWSNLIIHPSTNASFLLQERDSD*PPGAPT
Trigger: AGTAGGAGCACCTGGGGGTCAGTCACTGTCTCTTTC...TTGCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp TGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGTCTGTGATCCAAGAAGTTaGAAGGTGGGAAAGATTTTT +
Preference number: 4 (lower is better)
Translates to: CAQPEALLLNLQAYFLSVCDPRS*KVGKIF
Trigger: AAAAATCTTTCCCACCTTTCAACTTCTTGGATCACA...GACAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR GCA 90 bp TGTTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCTGGAGCAGGCCTGAATaGAGATCCTTGAGGGGATTG +
Preference number: 4 (lower is better)
Translates to: CFGLISLYIPVQMHPSSCWSRPE*RSLRGL
Trigger: CAATCCCCTCAAGGATCTGCATTCAGGCCTGCTCCA...GCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR GCA 90 bp TGTTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCTCACGTGGCAGAGGCTaGCCATTCATCTCATATGCC +
Preference number: 4 (lower is better)
Translates to: CFGLISLYIPVQMHPSSCSRGRG*PFISYA
Trigger: GGCATATGAGATGAATGGGCAGCCTCTGCCACGTGA...GCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR GCA 90 bp TGTTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCATGCATCCTTCCTCCTaGAATAGGCTCACTCCCCAG +
Preference number: 4 (lower is better)
Translates to: CFGLISLYIPVQMHPSSCMHPSS*NRLTPQ
Trigger: CTGGGGAGTGAGCCTATTGCAGGAGGAAGGATGCAT...GCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp TGTTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCTCCATCCCTGGGTGCTaGAGTTATCACCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: CFGLISLYIPVQMHPSSCSIPGC*SYHQRR
Trigger: CCTTCTCTGGTGATAACTCCAGCACCCAGGGATGGA...GCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTATGACTCTCCATCCCTaGGTGCTGGAGTTATCACCA +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCMTLHP*VLELSP
Trigger: TGGTGATAACTCCAGCACCCAGGGATGGAGAGTCAT...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp TTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCAAAGTTGGTGGCCAGCCTaGGCTAACACATCACAGAGC +
Preference number: 4 (lower is better)
Translates to: FWSNLIIHPSTNASFLLQSWWPA*ANTSQS
Trigger: GCTCTGTGATGTGTTAGCCCAGGCTGGCCACCAACT...TTGCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTTTCCTTTTGTCCAGCTaGCACAGGGGCTTTCAACTG +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCFLLSS*HRGFQL
Trigger: CAGTTGAAAGCCCCTGTGCCAGCTGGACAAAAGGAA...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCAAGAGGGAAGGTCCTTaGGTGAAATGTGCTATATGT +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCKREGP*VKCAIC
Trigger: ACATATAGCACATTTCACCCAAGGACCTTCCCTCTT...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAAAGAGGGAAGGTCCTTaGGTGAAATGTGCTATATGT +
Preference number: 4 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQKREGP*VKCAIC
Trigger: ACATATAGCACATTTCACCCAAGGACCTTCCCTCTT...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTTTTACTTCTTTGACCTaGGTCATCTCAGAGCGTCGG +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCFTSLT*VISERR
Trigger: CCGACGCTCTGAGATGACTCAGGTCAAAGAAGTAAA...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATGTGATCCAAGAAGTTaGAAGGTGGGAAAGATTTTT +
Preference number: 4 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGCDPRS*KVGKIF
Trigger: AAAAATCTTTCCCACCTTTCAACTTCTTGGATCACA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTGGGAAGGTCCTTGGGTaGAATGTGCTATATGTGTAC +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCGKVLG*NVLYVY
Trigger: GTACACATATAGCACATTTCACCCAAGGACCTTCCC...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCCCAGATTATTATTTCTaGAGTCAGCAGAGGACAACT +
Preference number: 4 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCPDYYF*SQQRTT
Trigger: AGTTGTCCTCTGCTGACTTCAGAAATAATAATCTGG...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCAGTGTCTTCAGCACTaGAATTTTACCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCQCLQH*NFTSPA
Trigger: AGCTGGGCTGGTAAAATTGCAGTGCTGAAGACACTG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTTCCTTTCCATGCTCATaGGGAGACATAGACATGGAC +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCSFPCS*GDIDMD
Trigger: GTCCATGTCTATGTCTCCCCATGAGCATGGAAAGGA...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTGACCTTTTACTTCTTTaGCCTGAGTCATCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCDLLLL*PESSQS
Trigger: GCTCTGAGATGACTCAGGTCAAAGAAGTAAAAGGTC...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTTGGGAAAGATTTTTCTaGAGCAGTGAGGCTAATGGG +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCWERFF*SSEANG
Trigger: CCCATTAGCCTCACTGCTTCAGAAAAATCTTTCCCA...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR TCA 90 bp TGTTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCGGGAAGGTCCTTGGGTaGAATGTGCTATATGTGTAC +
Preference number: 4 (lower is better)
Translates to: CFGLISLYIPVQMHPSSCGKVLG*NVLYVY
Trigger: GTACACATATAGCACATTTCACCCAAGGACCTTCCC...GCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCTAGCAGAGCTAACATaGAGAGCCAACAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCLAELT*RANKYS
Trigger: ACTGTACTTGTTGGCTCTTCATGTTAGCTCTGCTAG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR GCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTTACCTGGGAAAGTTGTaGAAGTCATCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCYLGKL*KSSRER
Trigger: TCTTTCCCTGGATGACTTGCACAACTTTCCCAGGTA...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR GCA 90 bp TTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCAACCCATTCATCTCATATaGCAGCAGGACCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FWSNLIIHPSTNASFLLQPIHLI*QQDLSF
Trigger: GAAGCTGAGGTCCTGCTGGCATATGAGATGAATGGG...TTGCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp TTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCAAATGACTCTCCATCCCTaGGTGCTGGAGTTATCACCA +
Preference number: 4 (lower is better)
Translates to: FWSNLIIHPSTNASFLLQMTLHP*VLELSP
Trigger: TGGTGATAACTCCAGCACCCAGGGATGGAGAGTCAT...TTGCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp TGTTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCTCCTTTCCATGCTCATaGGGAGACATAGACATGGAC +
Preference number: 4 (lower is better)
Translates to: CFGLISLYIPVQMHPSSCSFPCS*GDIDMD
Trigger: GTCCATGTCTATGTCTCCCCATGAGCATGGAAAGGA...GCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTATGTGTACTTGGGTATaGCTTAGGAAGGCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCMCTWV*LRKARV
Trigger: AACTCTGGCCTTCCTAAGCCATACCCAAGTACACAT...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCCCTTAGAGAAAACTTaGAGCACTTCAGAGACAGAC +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCPLEKT*STSETD
Trigger: GTCTGTCTCTGAAGTGCTCCAAGTTTTCTCTAAGGG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR TCA 90 bp TTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCAAGGTCCACAAATTCTGTaGCATCAAAGACCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FWSNLIIHPSTNASFLLQGPQIL*HQRPQS
Trigger: GCTCTGAGGTCTTTGATGTCACAGAATTTGTGGACC...TTGCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR GCA 90 bp TGTTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCACATCCCAGTACAAATaGATCCTTCCTCCTGCAATA +
Preference number: 4 (lower is better)
Translates to: CFGLISLYIPVQMHPSSCTSQYK*ILPPAI
Trigger: TATTGCAGGAGGAAGGATGCATTTGTACTGGGATGT...GCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR TCA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTTGTGATCCAAGAAGTTaGAAGGTGGGAAAGATTTTT +
Preference number: 4 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCCDPRS*KVGKIF
Trigger: AAAAATCTTTCCCACCTTTCAACTTCTTGGATCACA...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CAA 90 bp GGCGGGCACCCACCACTCCAGGAACCACCACACGCACAGGGAAGCCGTGGTCACATCTCAGAGCGTCGGTaGCCGGCACACTGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: GGHPPLQEPPHAQGSRGHISERR*PAHCRV
Trigger: CACTCTGCAGTGTGCCGGCAACCGACGCTCTGAGAT...GTGACCACGGCTTCCCTGTGCGTGTGGTGGTTCCTGGAGTGGTGGGTGCCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551841.6
CDS CCA 90 bp AACACTGCACCGAGACCTAATAGGGTCCCCATGACTCTCCATCCCTaGGTGCTGGAGTTATCACCAGAGAAGGTGAGGCTGGGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: NTAPRPNRVPMTLHP*VLELSPEKVRLGRW
Trigger: CCAGCGCCCCAGCCTCACCTTCTCTGGTGATAACTCCAGCACCCAGGGATGGAGAGTCATGGGGACCCTATTAGGTCTCGGTGCAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000546712.1
ENST00000546833.5
ENST00000548274.5
ENST00000550065.1
ENST00000550478.5
ENST00000551841.6
ENST00000552258.5
ENST00000552813.5
CDS TCA 90 bp CCTGAGGACCACAGCTCTGTGCAGCAGCAGCATTGTAGCAGACTGTaGAGGTCTGCAGCTTCACTCCTGAGCCAGCAAGAGCACGAACCC +
Preference number: 5 (lower is better)
Translates to: PEDHSSVQQQHCSRL*RSAASLLSQQEHEP
Trigger: GGGTTCGTGCTCTTGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACAGTCTGCTACAATGCTGCTGCTGCACAGAGCTGTGGTCCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547586.5
CDS GCA 90 bp GTTGGGTGTGATGTAGTTTTCTGTCAGCAGCTCAGGGGGAGGCTCTaGATTAAAGGGCCGCTGGCTGTTGACCTTCAGGGCTGGGTGACG +
Preference number: 5 (lower is better)
Translates to: VGCDVVFCQQLRGRL*IKGPLAVDLQGWVT
Trigger: CGTCACCCAGCCCTGAAGGTCAACAGCCAGCGGCCCTTTAATGCAGAGCCTCCCCCTGAGCTGCTGACAGAAAACTACATCACACCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
ENST00000550340.5
CDS CCA 90 bp GACACGATGCCAGGCATTGCTGAGAACACCTCGCAGGTTCCAGATTaGGGCCACGGTGTCTGGCTGCACATTGTAACCATCATCCACAGC +
Preference number: 5 (lower is better)
Translates to: DTMPGIAENTSQVPD*GHGVWLHIVTIIHS
Trigger: GCTGTGGATGATGGTTACAATGTGCAGCCAGACACCGTGGCCCCAATCTGGAACCTGCGAGGTGTTCTCAGCAATGCCTGGCATCGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CAA 90 bp ACTGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGCTCGCAGGTTCCAGATaGGGGCCACGGTGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: TVLSRKPYFLTYKPTSSLLAGSR*GPRCLA
Trigger: AGCCAGACACCGTGGCCCCAATCTGGAACCTGCGAG...CAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CAA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGATCTCAGAGCGTCGGTaGCCGGCACACTGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLISERR*PAHCRV
Trigger: CACTCTGCAGTGTGCCGGCAACCGACGCTCTGAGAT...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CAA 90 bp ACTGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGATCTCAGAGCGTCGGTaGCCGGCACACTGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: TVLSRKPYFLTYKPTSSLISERR*PAHCRV
Trigger: CACTCTGCAGTGTGCCGGCAACCGACGCTCTGAGAT...CAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CAA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGCTTATCCCTCAGCCATaGGCTGGAAGCGGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLLIPQP*AGSGWL
Trigger: GAGCCACCCGCTTCCAGCCAATGGCTGAGGGATAAG...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356124.8
CDS GCA 90 bp GAACTCAGTGAGCCCAGAATCCCAGGTTTGGGAGGGACAGCCTTTTaGTGTAATACAGAAATGCCACCCGTTGGTGCAGGTGATGACCCC +
Preference number: 5 (lower is better)
Translates to: ELSEPRIPGLGGTAF*CNTEMPPVGAGDDP
Trigger: GGGGTCATCACCTGCACCAACGGGTGGCATTTCTGTATTACAGCAAAAGGCTGTCCCTCCCAAACCTGGGATTCTGGGCTCACTGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546833.5
CDS CCA 90 bp AGGGCTGACTCGCAGGTGAACTCAGTGAGCCCAGAATCCCAGGTTTaGGAGGGACAGCCTTTTGCTGTAATACAGAAATGCCACCCGTTG +
Preference number: 5 (lower is better)
Translates to: RADSQVNSVSPESQV*EGQPFAVIQKCHPL
Trigger: CAACGGGTGGCATTTCTGTATTACAGCAAAAGGCTGTCCCTCCCAAACCTGGGATTCTGGGCTCACTGAGTTCACCTGCGAGTCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546833.5
CDS-3UTR CAA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGACGGTGGGGGCTACCTaGTCTTCAGGATTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLTVGAT*SSGFSS
Trigger: GGAGCTGAATCCTGAAGACAAGGTAGCCCCCACCGT...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CAA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAATCTCAGAGCGTCGGTaGCCGGCACACTGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGISERR*PAHCRV
Trigger: CACTCTGCAGTGTGCCGGCAACCGACGCTCTGAGAT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CAA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACTCGCAGGTTCCAGATaGGGGCCACGGTGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQLAGSR*GPRCLA
Trigger: AGCCAGACACCGTGGCCCCAATCTGGAACCTGCGAG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CAA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCCTCGCAGGTTCCAGATaGGGGCCACGGTGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCLAGSR*GPRCLA
Trigger: AGCCAGACACCGTGGCCCCAATCTGGAACCTGCGAG...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CAA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGACACGATGCCAGGCATaGCTGAGAACACCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLTRCQA*LRTPRR
Trigger: CCTGCGAGGTGTTCTCAGCAATGCCTGGCATCGTGT...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CAA 90 bp ACTGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGACACGATGCCAGGCATaGCTGAGAACACCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: TVLSRKPYFLTYKPTSSLTRCQA*LRTPRR
Trigger: CCTGCGAGGTGTTCTCAGCAATGCCTGGCATCGTGT...CAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS CCA 90 bp GGTGACGTACAGGATCATCAGCATAAGGGTCAGAGGTCTCCACGGTaGGGGCTACCTTGTCTTCAGGATTCAGCTCCCCAATCTTGTACT +
Preference number: 5 (lower is better)
Translates to: GDVQDHQHKGQRSPR*GLPCLQDSAPQSCT
Trigger: AGTACAAGATTGGGGAGCTGAATCCTGAAGACAAGGTAGCCCCCACCGTGGAGACCTCTGACCCTTATGCTGATGATCCTGTACGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
ENST00000550340.5
ENST00000551698.5
CDS-3UTR CAA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGCTTGAGGGGATTGACTaGAGTCTGCAGGCCTGTTGG +
Preference number: 5 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLLEGID*SLQACW
Trigger: CCAACAGGCCTGCAGACTCAAGTCAATCCCCTCAAG...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CAA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAACGGTGGGGGCTACCTaGTCTTCAGGATTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGTVGAT*SSGFSS
Trigger: GGAGCTGAATCCTGAAGACAAGGTAGCCCCCACCGT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CAA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAATCTCAGAGCGTCGGTaGCCGGCACACTGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQISERR*PAHCRV
Trigger: CACTCTGCAGTGTGCCGGCAACCGACGCTCTGAGAT...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CAA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCATCTCAGAGCGTCGGTaGCCGGCACACTGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCISERR*PAHCRV
Trigger: CACTCTGCAGTGTGCCGGCAACCGACGCTCTGAGAT...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CAA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAACACGATGCCAGGCATaGCTGAGAACACCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGTRCQA*LRTPRR
Trigger: CCTGCGAGGTGTTCTCAGCAATGCCTGGCATCGTGT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CAA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGACGGTTGTGCCCCTaGCTCTCCTCGCAACTCTCT +
Preference number: 5 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGRRLCP*LSSQLS
Trigger: AGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CAA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGTATAAAGGGAGACGGTaGTGCCCCTTGCTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLYKGRR*CPLLSS
Trigger: CGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATA...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CAA 90 bp CCTCCTGCAATAGGCTCACTCCCCAGGCCCAAGAGTTATGATCTTAAACAGACTAGACGGTTGTGCCCCTaGCTCTCAGCTCACACTTCC +
Preference number: 5 (lower is better)
Translates to: PPAIGSLPRPKSYDLKQTRRLCP*LSAHTS
Trigger: GGAAGTGTGAGCTGAGAGCAAGGGGCACAACCGTCT...AGTCTGTTTAAGATCATAACTCTTGGGCCTGGGGAGTGAGCCTATTGCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS TCA 90 bp AGCAGCAGCATTGTAGCAGACTGTGAAGGTCTGCAGCTTCACTCCTaGGCCAGCAAGAGCACGAACCCACCAGAAGGAAGAAACTCCAAA +
Preference number: 5 (lower is better)
Translates to: SSSIVADCEGLQLHS*ASKSTNPPEGRNSK
Trigger: TTTGGAGTTTCTTCCTTCTGGTGGGTTCGTGCTCTTGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACAGTCTGCTACAATGCTGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547586.5
CDS-3UTR CAA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCCCCAGAATCCCAGGTTaGGGAGGGACAGCCTTTTGC +
Preference number: 5 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCPRIPG*GGTAFC
Trigger: GCAAAAGGCTGTCCCTCCCAAACCTGGGATTCTGGG...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266971.8
ENST00000394115.6
CDS-3UTR CAA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCACGGTGGGGGCTACCTaGTCTTCAGGATTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCTVGAT*SSGFSS
Trigger: GGAGCTGAATCCTGAAGACAAGGTAGCCCCCACCGT...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CAA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAACACGATGCCAGGCATaGCTGAGAACACCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQTRCQA*LRTPRR
Trigger: CCTGCGAGGTGTTCTCAGCAATGCCTGGCATCGTGT...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CAA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAAGACGGTTGTGCCCCTaGCTCTCCTCGCAACTCTCT +
Preference number: 5 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQRRLCP*LSSQLS
Trigger: AGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCT...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CAA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCAGACGGTTGTGCCCCTaGCTCTCCTCGCAACTCTCT +
Preference number: 5 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCRRLCP*LSSQLS
Trigger: AGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCT...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CAA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATATAAAGGGAGACGGTaGTGCCCCTTGCTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGYKGRR*CPLLSS
Trigger: CGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS TCA 90 bp ATTATTTCTGAAGTCAGCAGAGGACAACTGTGGGTCAGACTGATGTaGAGGTCTGCAGCTTCACTCCTGAGCCAGCAAGAGCACGAACCC +
Preference number: 5 (lower is better)
Translates to: IISEVSRGQLWVRLM*RSAASLLSQQEHEP
Trigger: GGGTTCGTGCTCTTGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACATCAGTCTGACCCACAGTTGTCCTCTGCTGACTTCAGAAATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550121.5
CDS-3UTR CAA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAACTTGAGGGGATTGACTaGAGTCTGCAGGCCTGTTGG +
Preference number: 5 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQLEGID*SLQACW
Trigger: CCAACAGGCCTGCAGACTCAAGTCAATCCCCTCAAG...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CAA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCTCGCAGGTTCCAGATaGGGGCCACGGTGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCLAGSR*GPRCLA
Trigger: AGCCAGACACCGTGGCCCCAATCTGGAACCTGCGAG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CAA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAATATAAAGGGAGACGGTaGTGCCCCTTGCTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQYKGRR*CPLLSS
Trigger: CGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATA...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CAA 90 bp ACTGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGGAGGCTGAGACAGAATaGCTTGAACTCTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: TVLSRKPYFLTYKPTSSLEAETE*LELCLL
Trigger: AAGGAGGCAGAGTTCAAGCAATTCTGTCTCAGCCTC...CAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS CCA 90 bp AGGAGTCTTGAGAGTGGGAGTCCAAATGGGCCCTTAGAGAAAACTTaGAGCACTTCAGAGACAGACTGTGCTGACAGGATGGCAGGTAAT +
Preference number: 5 (lower is better)
Translates to: RSLESGSPNGPLEKT*STSETDCADRMAGN
Trigger: ATTACCTGCCATCCTGTCAGCACAGTCTGTCTCTGAAGTGCTCCAAGTTTTCTCTAAGGGCCCATTTGGACTCCCACTCTCAAGACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR CAA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTGGGAGGGACAGCCTTTaGCGGGTCCAGTGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCGRDSL*RVQCLQ
Trigger: CTGAAGACACTGGACCCGCAAAAGGCTGTCCCTCCC...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266971.8
ENST00000394115.6
CDS-3UTR CAA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGATCGTACCTGGGAAAGTaGTGCAAGTCATCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGSYLGK*CKSSRE
Trigger: TTCCCTGGATGACTTGCACAACTTTCCCAGGTACGA...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS CCA 90 bp TGGGGTCTACTTCTTTCTCCCTGGTTGGCCATTGGTTCCTTAAGTTaGAACTTAGTTTCTCCAGGGATAGGTGGGAAAAGTGGGATCTGG +
Preference number: 5 (lower is better)
Translates to: WGLLLSPWLAIGSLS*NLVSPGIGGKSGIW
Trigger: CCAGATCCCACTTTTCCCACCTATCCCTGGAGAAACTAAGTTCCAACTTAAGGAACCAATGGCCAACCAGGGAGAAAGAAGTAGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546712.1
CDS CCA 90 bp GCTAGTGAAGGCTTGGGGTCTACTTCTTTCTCCCTGGTTGGCCATTaGTTCCTTAAGTTGGAACTTAGTTTCTCCAGGGATAGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: ASEGLGSTSFSLVGH*FLKLELSFSRDRWE
Trigger: TTCCCACCTATCCCTGGAGAAACTAAGTTCCAACTTAAGGAACCAATGGCCAACCAGGGAGAAAGAAGTAGACCCCAAGCCTTCACTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546712.1
CDS CCA 90 bp CATGTGAAAGGGCTAGTGAAGGCTTGGGGTCTACTTCTTTCTCCCTaGTTGGCCATTGGTTCCTTAAGTTGGAACTTAGTTTCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: HVKGLVKAWGLLLSP*LAIGSLSWNLVSPG
Trigger: CCCTGGAGAAACTAAGTTCCAACTTAAGGAACCAATGGCCAACCAGGGAGAAAGAAGTAGACCCCAAGCCTTCACTAGCCCTTTCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546712.1
CDS CCA 90 bp GGTCTTAGTAGCACGTATGGTCATGTGAAAGGGCTAGTGAAGGCTTaGGGTCTACTTCTTTCTCCCTGGTTGGCCATTGGTTCCTTAAGT +
Preference number: 5 (lower is better)
Translates to: GLSSTYGHVKGLVKA*GLLLSPWLAIGSLS
Trigger: ACTTAAGGAACCAATGGCCAACCAGGGAGAAAGAAGTAGACCCCAAGCCTTCACTAGCCCTTTCACATGACCATACGTGCTACTAAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546712.1
CDS-3UTR CAA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTCCCAGAATCCCAGGTTaGGGAGGGACAGCCTTTTGC +
Preference number: 5 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCPRIPG*GGTAFC
Trigger: GCAAAAGGCTGTCCCTCCCAAACCTGGGATTCTGGG...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266971.8
ENST00000394115.6
CDS-3UTR CAA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTACGGTGGGGGCTACCTaGTCTTCAGGATTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCTVGAT*SSGFSS
Trigger: GGAGCTGAATCCTGAAGACAAGGTAGCCCCCACCGT...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CAA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAATCGTACCTGGGAAAGTaGTGCAAGTCATCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQSYLGK*CKSSRE
Trigger: TTCCCTGGATGACTTGCACAACTTTCCCAGGTACGA...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CAA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTCGTACCTGGGAAAGTaGTGCAAGTCATCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCSYLGK*CKSSRE
Trigger: TTCCCTGGATGACTTGCACAACTTTCCCAGGTACGA...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CAA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTACACGATGCCAGGCATaGCTGAGAACACCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCTRCQA*LRTPRR
Trigger: CCTGCGAGGTGTTCTCAGCAATGCCTGGCATCGTGT...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CAA 90 bp ACTGTGCTCAGCCGGAAGCCCTACTTCTTAACCTACAAGCCTACTTCCTCTCTGAAAGAGGGAAGGTCCTaGGGTGAAATGTGCTATATG +
Preference number: 5 (lower is better)
Translates to: TVLSRKPYFLTYKPTSSLKEGRS*GEMCYM
Trigger: CATATAGCACATTTCACCCAAGGACCTTCCCTCTTT...CAGAGAGGAAGTAGGCTTGTAGGTTAAGAAGTAGGGCTTCCGGCTGAGCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CAA 90 bp AGTAGAACTATAAAGGGAGACGGTTGTGCCCCTTGCTCTCCTCGCAACTCTCTGAAGCAAAACAAGGCCTaGATGGCAGTAGGCATTAGA +
Preference number: 5 (lower is better)
Translates to: SRTIKGDGCAPCSPRNSLKQNKA*MAVGIR
Trigger: TCTAATGCCTACTGCCATCAAGGCCTTGTTTTGCTT...CAGAGAGTTGCGAGGAGAGCAAGGGGCACAACCGTCTCCCTTTATAGTTCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000548274.5
CDS-3UTR CAA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGACTGAGACAGAATTGCTaGAACTCTGCCTCCTTGGTT +
Preference number: 5 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGLRQNC*NSASLV
Trigger: AACCAAGGAGGCAGAGTTCAAGCAATTCTGTCTCAG...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CAA 90 bp CTGGCACAGGTTCAAAGGCCAAGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAAGCAAAACAAGGCCTaGATGGCAGTAGGCATTAGA +
Preference number: 5 (lower is better)
Translates to: LAQVQRPRGVCNIVSKEGKQNKA*MAVGIR
Trigger: TCTAATGCCTACTGCCATCAAGGCCTTGTTTTGCTT...TCCCTCTTTGGACACTATGTTACATACCCCTCTTGGCCTTTGAACCTGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CAA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTGGACACACTAGCACTTaGGGAGACCTACACAGGAGG +
Preference number: 5 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCGHTST*GDLHRR
Trigger: CCTCCTGTGTAGGTCTCCCAAAGTGCTAGTGTGTCC...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394115.6
CDS-3UTR CAA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCGCCCTTAGAGAAAACTaGGAGCACTTCAGAGACAGA +
Preference number: 5 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCALREN*EHFRDR
Trigger: TCTGTCTCTGAAGTGCTCCAAGTTTTCTCTAAGGGC...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS-3UTR CAA 90 bp TTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCAAACGGTGGGGGCTACCTaGTCTTCAGGATTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FWSNLIIHPSTNASFLLQTVGAT*SSGFSS
Trigger: GGAGCTGAATCCTGAAGACAAGGTAGCCCCCACCGT...TTGCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS-3UTR CAA 90 bp AGAGGGGTATGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCAAAGAGGGAAGGTCCTaGGGTGAAATGTGCTATATG +
Preference number: 5 (lower is better)
Translates to: RGVCNIVSKEGRSLGEMCKEGRS*GEMCYM
Trigger: CATATAGCACATTTCACCCAAGGACCTTCCCTCTTT...GCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACATACCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CAA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAAAAGAGGGAAGGTCCTaGGGTGAAATGTGCTATATG +
Preference number: 5 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQKEGRS*GEMCYM
Trigger: CATATAGCACATTTCACCCAAGGACCTTCCCTCTTT...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CAA 90 bp TTTTCACTTCTAGCCCCTTGCTGTAACAGCTCACACTTCCTGGCACAGGTTCAAAAGCAAAACAAGGCCTaGATGGCAGTAGGCATTAGA +
Preference number: 5 (lower is better)
Translates to: FSLLAPCCNSSHFLAQVQKQNKA*MAVGIR
Trigger: TCTAATGCCTACTGCCATCAAGGCCTTGTTTTGCTT...TTGAACCTGTGCCAGGAAGTGTGAGCTGTTACAGCAAGGGGCTAGAAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS TCA 90 bp AGCAAGATTCCAAGCCGTTCTGAACTTGCTTCCTCATCTCTGAAATaGCATCTGCCTAGCAGAGCTAACATGAAGAGCCAACAAGTACAG +
Preference number: 5 (lower is better)
Translates to: SKIPSRSELASSSLK*HLPSRANMKSQQVQ
Trigger: CTGTACTTGTTGGCTCTTCATGTTAGCTCTGCTAGGCAGATGTCATTTCAGAGATGAGGAAGCAAGTTCAGAACGGCTTGGAATCTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS TCA 90 bp CCTAAAGGACCGAAACCAAATGTCTACTGGCCAGATTATTATTTCTaGAGTCAGCAGAGGACAACTGTGGGTCAGACTGATGTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: PKGPKPNVYWPDYYF*SQQRTTVGQTDVKV
Trigger: GACCTTCACATCAGTCTGACCCACAGTTGTCCTCTGCTGACTTCAGAAATAATAATCTGGCCAGTAGACATTTGGTTTCGGTCCTTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550121.5
CDS-3UTR CAA 90 bp TGTTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCTATAAAGGGAGACGGTaGTGCCCCTTGCTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: CFGLISLYIPVQMHPSSCYKGRR*CPLLSA
Trigger: AGCTGAGAGCAAGGGGCACAACCGTCTCCCTTTATA...GCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS TCA 90 bp CCTAAAGGACCGAAACCAAATGTCTACTGGCCAGATTATTATTTCTaGAGTCAGCAGAGGACAACTGTGGGTCAGACTGACTTAAACAGG +
Preference number: 5 (lower is better)
Translates to: PKGPKPNVYWPDYYF*SQQRTTVGQTDLNR
Trigger: CCTGTTTAAGTCAGTCTGACCCACAGTTGTCCTCTGCTGACTTCAGAAATAATAATCTGGCCAGTAGACATTTGGTTTCGGTCCTTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394109.7
ENST00000546712.1
CDS-3UTR CAA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTAAAGAGGGAAGGTCCTaGGGTGAAATGTGCTATATG +
Preference number: 5 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCKEGRS*GEMCYM
Trigger: CATATAGCACATTTCACCCAAGGACCTTCCCTCTTT...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS-3UTR CAA 90 bp TGTAACATAGTGTCCAAAGAGGGAAGGTCCTTGGGTGAAATGTGCTATATGTGTAAGCAAAACAAGGCCTaGATGGCAGTAGGCATTAGA +
Preference number: 5 (lower is better)
Translates to: CNIVSKEGRSLGEMCYMCKQNKA*MAVGIR
Trigger: TCTAATGCCTACTGCCATCAAGGCCTTGTTTTGCTT...ACACATATAGCACATTTCACCCAAGGACCTTCCCTCTTTGGACACTATGTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
CDS-3UTR CAA 90 bp TTTTGGTCTAATCTCATTATACATCCCAGTACAAATGCATCCTTCCTCCTGCAATTGAACTCTGCCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 5 (lower is better)
Translates to: FWSNLIIHPSTNASFLLQLNSAS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCAAGGAGGCAGAGTTCAA...TTGCAGGAGGAAGGATGCATTTGTACTGGGATGTATAATGAGATTAGACCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550065.1
CDS CAA 90 bp CCCAGACAGAAGGAGTGGAGGCAGGTACTGATAGTTTTGTTGCCCTaGAGGTTCGGAGCACAGCTGGACACCAAGGCCCCCTCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: PRQKEWRQVLIVLLP*RFGAQLDTKAPSAA
Trigger: GGCAGCGGAGGGGGCCTTGGTGTCCAGCTGTGCTCCGAACCTCAAGGGCAACAAAACTATCAGTACCTGCCTCCACTCCTTCTGTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546833.5
CDS GCA 72 bp GGAACATACGTCCGGCATCCAGGCACAAAAGGGTCTTaGGGCAACACCCCGCGATCTCAAGAGCACCCAGAC +
Preference number: 6 (lower is better)
Translates to: GTYVRHPGTKGS*GNTPRSQEHPD
Trigger: GTCTGGGTGCTCTTGAGATCGCGGGGTGTTGCCGCAAGACCCTTTTGTGCCTGGATGCCGGACGTATGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546833.5
CDS CAA 72 bp GGAGACCTACACAGGAGGACTGCTAGAGGCCAGGAGTaGGAGACTCCGTCCCTCAATGCCAGCAGCCTGTTT +
Preference number: 6 (lower is better)
Translates to: GDLHRRTARGQE*ETPSLNASSLF
Trigger: AAACAGGCTGCTGGCATTGAGGGACGGAGTCTCCAACTCCTGGCCTCTAGCAGTCCTCCTGTGTAGGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394115.6
ENST00000547586.5
ENST00000550121.5
CDS CAA 72 bp AGGAACATACGTCCGGCATCCAGGCACAAAAGGGTCTaGCGGCAACACCCCGCGATCTCAAGAGCACCCAGA +
Preference number: 6 (lower is better)
Translates to: RNIRPASRHKRV*RQHPAISRAPR
Trigger: TCTGGGTGCTCTTGAGATCGCGGGGTGTTGCCGCAAGACCCTTTTGTGCCTGGATGCCGGACGTATGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546833.5
CDS CAA 90 bp TCAAGAGCACCCAGACAGAAGGAGTGGAGGCAGGTACTGATAGTTTaGTTGCCCTTGAGGTTCGGAGCACAGCTGGACACCAAGGCCCCC +
Preference number: 6 (lower is better)
Translates to: SRAPRQKEWRQVLIV*LPLRFGAQLDTKAP
Trigger: GGGGGCCTTGGTGTCCAGCTGTGCTCCGAACCTCAAGGGCAACAAAACTATCAGTACCTGCCTCCACTCCTTCTGTCTGGGTGCTCTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546833.5
CDS CAA 90 bp ACGTTAGGTAGGAACATACGTCCGGCATCCAGGCACAAAAGGGTCTaGCGGCAACACCCCGCGATCTCAAGAGCACCCAGACAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: TLGRNIRPASRHKRV*RQHPAISRAPRQKE
Trigger: CTCCTTCTGTCTGGGTGCTCTTGAGATCGCGGGGTGTTGCCGCAAGACCCTTTTGTGCCTGGATGCCGGACGTATGTTCCTACCTAACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546833.5
CDS TCA 72 bp CCCCTGATTCTACAGTCTCTCCATCCCGGGGCTCTGTaGTGGCCGACTGGACAGGAAGTTCCTGAATGGATG +
Preference number: 6 (lower is better)
Translates to: PLILQSLHPGAL*WPTGQEVPEWM
Trigger: CATCCATTCAGGAACTTCCTGTCCAGTCGGCCATCACAGAGCCCCGGGATGGAGAGACTGTAGAATCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS GCA 72 bp GATGTAGTTTTCTGTCAGCAGCTCAGGGGGAGGCTCTaGATTAAAGGGCCGCTGGCTGTTGACCTTCAGGGC +
Preference number: 6 (lower is better)
Translates to: DVVFCQQLRGRL*IKGPLAVDLQG
Trigger: GCCCTGAAGGTCAACAGCCAGCGGCCCTTTAATGCAGAGCCTCCCCCTGAGCTGCTGACAGAAAACTACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
ENST00000550340.5
CDS CCA 72 bp TCGCAGGTGAACTCAGTGAGCCCAGAATCCCAGGTTTaGGAGGGACAGCCTTTTGCGGGTCCAGTGTCTTCA +
Preference number: 6 (lower is better)
Translates to: SQVNSVSPESQV*EGQPFAGPVSS
Trigger: TGAAGACACTGGACCCGCAAAAGGCTGTCCCTCCCAAACCTGGGATTCTGGGCTCACTGAGTTCACCTGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266971.8
ENST00000394115.6
ENST00000547586.5
ENST00000550121.5
ENST00000550478.5
ENST00000551698.5
ENST00000552813.5
CDS CCA 72 bp CCGAGACCTAATAGGGTCCCCATGACTCTCCATCCCTaGGTGCTGGAGTTATCACCAGAGAAGGTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: PRPNRVPMTLHP*VLELSPEKVRL
Trigger: CAGCCTCACCTTCTCTGGTGATAACTCCAGCACCCAGGGATGGAGAGTCATGGGGACCCTATTAGGTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000546712.1
ENST00000546833.5
ENST00000548274.5
ENST00000550065.1
ENST00000550478.5
ENST00000551841.6
ENST00000552258.5
ENST00000552813.5
CDS CCA 72 bp CCAGGCATTGCTGAGAACACCTCGCAGGTTCCAGATTaGGGCCACGGTGTCTGGCTGCACATTGTAACCATC +
Preference number: 6 (lower is better)
Translates to: PGIAENTSQVPD*GHGVWLHIVTI
Trigger: GATGGTTACAATGTGCAGCCAGACACCGTGGCCCCAATCTGGAACCTGCGAGGTGTTCTCAGCAATGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS CAA 72 bp AAGGAGTGGAGGCAGGTACTGATAGTTTTGTTGCCCTaGAGGTTCGGAGCACAGCTGGACACCAAGGCCCCC +
Preference number: 6 (lower is better)
Translates to: KEWRQVLIVLLP*RFGAQLDTKAP
Trigger: GGGGGCCTTGGTGTCCAGCTGTGCTCCGAACCTCAAGGGCAACAAAACTATCAGTACCTGCCTCCACTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546833.5
CDS GCA 72 bp CAGAGGACAACTGTGGGTCAGACTGATGTGAAGGTCTaGAGCTTCACTCCTGAGCCAGCAAGAGCACGAACC +
Preference number: 6 (lower is better)
Translates to: QRTTVGQTDVKV*SFTPEPARART
Trigger: GGTTCGTGCTCTTGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACATCAGTCTGACCCACAGTTGTCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550121.5
CDS CCA 72 bp ACCAAGAACCCACCAATTCCGGACACACTAGCACTTTaGGAGACCTACACAGGAGGACTGCTAGAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: TKNPPIPDTLAL*ETYTGGLLEAR
Trigger: CCTGGCCTCTAGCAGTCCTCCTGTGTAGGTCTCCCAAAGTGCTAGTGTGTCCGGAATTGGTGGGTTCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394115.6
ENST00000547586.5
ENST00000550121.5
ENST00000552258.5
CDS CAA 72 bp GACCAAGAACCCACCAATTCCGGACACACTAGCACTTaGGGAGACCTACACAGGAGGACTGCTAGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: DQEPTNSGHTST*GDLHRRTARGQ
Trigger: CTGGCCTCTAGCAGTCCTCCTGTGTAGGTCTCCCAAAGTGCTAGTGTGTCCGGAATTGGTGGGTTCTTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394115.6
ENST00000547586.5
ENST00000550121.5
ENST00000552258.5
CDS CAA 72 bp CCCAGACAGAAGGAGTGGAGGCAGGTACTGATAGTTTaGTTGCCCTTGAGGTTCGGAGCACAGCTGGACACC +
Preference number: 6 (lower is better)
Translates to: PRQKEWRQVLIV*LPLRFGAQLDT
Trigger: GGTGTCCAGCTGTGCTCCGAACCTCAAGGGCAACAAAACTATCAGTACCTGCCTCCACTCCTTCTGTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546833.5
CDS TCA 72 bp TGGCTCCTGTTCTCCACTCCAGACCTTTTACTTCTTTaGCCTGAGTCATCTCAGAGCGTCGGTTGCCGGCAC +
Preference number: 6 (lower is better)
Translates to: WLLFSTPDLLLL*PESSQSVGCRH
Trigger: GTGCCGGCAACCGACGCTCTGAGATGACTCAGGTCAAAGAAGTAAAAGGTCTGGAGTGGAGAACAGGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
ENST00000551841.6
CDS TCA 72 bp CGGGGCTCTGTGATGGCCGACTGGACAGGAAGTTCCTaGATGGATGGAGCAGAGTCAAAATCTACAGTCTCC +
Preference number: 6 (lower is better)
Translates to: RGSVMADWTGSS*MDGAESKSTVS
Trigger: GGAGACTGTAGATTTTGACTCTGCTCCATCCATTCAGGAACTTCCTGTCCAGTCGGCCATCACAGAGCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266971.8
ENST00000356124.8
ENST00000394109.7
ENST00000394115.6
ENST00000548274.5
ENST00000550065.1
CDS TCA 72 bp GAAGTCAGCAGAGGACAACTGTGGGTCAGACTGATGTaGAGGTCTGCAGCTTCACTCCTGAGCCAGCAAGAG +
Preference number: 6 (lower is better)
Translates to: EVSRGQLWVRLM*RSAASLLSQQE
Trigger: CTCTTGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACATCAGTCTGACCCACAGTTGTCCTCTGCTGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550121.5
CDS GCA 72 bp AGCATTGTAGCAGACCGGGTCCAGTGTCTTCAGCACTaGAATTTTACCAGCCCAGCTCTGCGAGTTCTCGAG +
Preference number: 6 (lower is better)
Translates to: SIVADRVQCLQH*NFTSPALRVLE
Trigger: CTCGAGAACTCGCAGAGCTGGGCTGGTAAAATTGCAGTGCTGAAGACACTGGACCCGGTCTGCTACAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356124.8
CDS GCA 72 bp GTTTGGGAGGGACAGCCTTTTGCTGTAATACAGAAATaGCACCCGTTGGTGCAGGTGATGACCCCTCACTCC +
Preference number: 6 (lower is better)
Translates to: VWEGQPFAVIQK*HPLVQVMTPHS
Trigger: GGAGTGAGGGGTCATCACCTGCACCAACGGGTGGCATTTCTGTATTACAGCAAAAGGCTGTCCCTCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546833.5
CDS GCA 72 bp GAGCCCAGAATCCCAGGTTTGGGAGGGACAGCCTTTTaGTGTAATACAGAAATGCCACCCGTTGGTGCAGGT +
Preference number: 6 (lower is better)
Translates to: EPRIPGLGGTAF*CNTEMPPVGAG
Trigger: ACCTGCACCAACGGGTGGCATTTCTGTATTACAGCAAAAGGCTGTCCCTCCCAAACCTGGGATTCTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546833.5
CDS TCA 72 bp ATTGTAGCAGACTGTGAAGGTCTGCAGCTTCACTCCTaGGCCAGCAAGAGCACGAACCCACCAGAAGGAAGA +
Preference number: 6 (lower is better)
Translates to: IVADCEGLQLHS*ASKSTNPPEGR
Trigger: TCTTCCTTCTGGTGGGTTCGTGCTCTTGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACAGTCTGCTACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547586.5
CDS CAA 72 bp AGACAGAAGGAGTGGAGGCAGGTACTGATAGTTTTGTaGCCCTTGAGGTTCGGAGCACAGCTGGACACCAAG +
Preference number: 6 (lower is better)
Translates to: RQKEWRQVLIVL*PLRFGAQLDTK
Trigger: CTTGGTGTCCAGCTGTGCTCCGAACCTCAAGGGCAACAAAACTATCAGTACCTGCCTCCACTCCTTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546833.5
CDS CCA 72 bp AGCACGTATGGTCATGTGAAAGGGCTAGTGAAGGCTTaGGGTCTACTTCTTTCTCCCTGGTTGGCCATTGGT +
Preference number: 6 (lower is better)
Translates to: STYGHVKGLVKA*GLLLSPWLAIG
Trigger: ACCAATGGCCAACCAGGGAGAAAGAAGTAGACCCCAAGCCTTCACTAGCCCTTTCACATGACCATACGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546712.1
CDS TCA 72 bp CCAGCCCGATTTCCTGAGCAAGATTCCAAGCCGTTCTaGACTTGCTTCCTCATCTCTGAAATGACATCTGCC +
Preference number: 6 (lower is better)
Translates to: PARFPEQDSKPF*TCFLISEMTSA
Trigger: GGCAGATGTCATTTCAGAGATGAGGAAGCAAGTTCAGAACGGCTTGGAATCTTGCTCAGGAAATCGGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS CCA 72 bp GGCTTGGGGTCTACTTCTTTCTCCCTGGTTGGCCATTaGTTCCTTAAGTTGGAACTTAGTTTCTCCAGGGAT +
Preference number: 6 (lower is better)
Translates to: GLGSTSFSLVGH*FLKLELSFSRD
Trigger: ATCCCTGGAGAAACTAAGTTCCAACTTAAGGAACCAATGGCCAACCAGGGAGAAAGAAGTAGACCCCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546712.1
CDS CCA 72 bp GGGCTAGTGAAGGCTTGGGGTCTACTTCTTTCTCCCTaGTTGGCCATTGGTTCCTTAAGTTGGAACTTAGTT +
Preference number: 6 (lower is better)
Translates to: GLVKAWGLLLSP*LAIGSLSWNLV
Trigger: AACTAAGTTCCAACTTAAGGAACCAATGGCCAACCAGGGAGAAAGAAGTAGACCCCAAGCCTTCACTAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546712.1
CDS CAA 90 bp TTGGGGTCTACTTCTTTCTCCCTGGTTGGCCATTGGTTCCTTAAGTaGGAACTTAGTTTCTCCAGGGATAGGTGGGAAAAGTGGGATCTG +
Preference number: 6 (lower is better)
Translates to: LGSTSFSLVGHWFLK*ELSFSRDRWEKWDL
Trigger: CAGATCCCACTTTTCCCACCTATCCCTGGAGAAACTAAGTTCCAACTTAAGGAACCAATGGCCAACCAGGGAGAAAGAAGTAGACCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546712.1
CDS TCA 72 bp AAGCCCAGATTCTGGGGGCAAAATGCCTTGGGTTTGTaGAACTGGATCTCTTGTTATTCATTAACCAGCCCG +
Preference number: 6 (lower is better)
Translates to: KPRFWGQNALGL*NWISCYSLTSP
Trigger: CGGGCTGGTTAATGAATAACAAGAGATCCAGTTTCACAAACCCAAGGCATTTTGCCCCCAGAATCTGGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS CAA 90 bp CAGATTCTGGGGGCAAAATGCCTTGGGTTTGTGAAACTGGATCTCTaGTTATTCATTAACCAGCCCGATTTCCTGAGCAAGATTCCAAGC +
Preference number: 6 (lower is better)
Translates to: QILGAKCLGFVKLDL*LFINQPDFLSKIPS
Trigger: GCTTGGAATCTTGCTCAGGAAATCGGGCTGGTTAATGAATAACAAGAGATCCAGTTTCACAAACCCAAGGCATTTTGCCCCCAGAATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394109.7
CDS CCA 72 bp CTTCTTTCTCCCTGGTTGGCCATTGGTTCCTTAAGTTaGAACTTAGTTTCTCCAGGGATAGGTGGGAAAAGT +
Preference number: 6 (lower is better)
Translates to: LLSPWLAIGSLS*NLVSPGIGGKS
Trigger: ACTTTTCCCACCTATCCCTGGAGAAACTAAGTTCCAACTTAAGGAACCAATGGCCAACCAGGGAGAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546712.1
CDS CAA 72 bp ACTTCTTTCTCCCTGGTTGGCCATTGGTTCCTTAAGTaGGAACTTAGTTTCTCCAGGGATAGGTGGGAAAAG +
Preference number: 6 (lower is better)
Translates to: TSFSLVGHWFLK*ELSFSRDRWEK
Trigger: CTTTTCCCACCTATCCCTGGAGAAACTAAGTTCCAACTTAAGGAACCAATGGCCAACCAGGGAGAAAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546712.1
CDS CAA 72 bp CTAGTGAAGGCTTGGGGTCTACTTCTTTCTCCCTGGTaGGCCATTGGTTCCTTAAGTTGGAACTTAGTTTCT +
Preference number: 6 (lower is better)
Translates to: LVKAWGLLLSPW*AIGSLSWNLVS
Trigger: AGAAACTAAGTTCCAACTTAAGGAACCAATGGCCAACCAGGGAGAAAGAAGTAGACCCCAAGCCTTCACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546712.1
CDS TCA 72 bp TGGATCTCTTGTTATTCATTAACCAGCCCGATTTCCTaGGCAAGATTCCAAGCCGTTCTGAACTTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: WISCYSLTSPIS*ARFQAVLNLLP
Trigger: AGGAAGCAAGTTCAGAACGGCTTGGAATCTTGCTCAGGAAATCGGGCTGGTTAATGAATAACAAGAGATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394109.7