RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SUN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000100242

Ensembl transcript IDs: ENST00000405018.5, ENST00000405510.5, ENST00000406622.5, ENST00000417332.5, ENST00000420859.5, ENST00000430185.5, ENST00000433561.5, ENST00000438058.5, ENST00000439339.1, ENST00000452294.5, ENST00000455125.1, ENST00000456894.5, ENST00000464202.1, ENST00000469086.5, ENST00000470642.1, ENST00000477262.5, ENST00000480307.1, ENST00000494273.1

Found 645 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCACTGCCTGAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGCCCTaGCATGTGCTGGCGGCGGCTCCTCGAACGCCTCTCCCGGCCTTC +
Preference number: 1 (lower is better)
Translates to: ALPEAPAGHGRMPAP*HVLAAAPRTPLPAF
Trigger: GAAGGCCGGGAGAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAGGCAGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
3UTR GCA 90 bp CTGAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTaGTGGCGGCGGCTCCTCGAACGCCTCTCCCGGCCTTCCTTTCCT +
Preference number: 1 (lower is better)
Translates to: LRLQLAMVECPRPGM*WRRLLERLSRPSFP
Trigger: AGGAAAGGAAGGCCGGGAGAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
3UTR GCA 90 bp TTAAGCCGCATGCACTGCCTGAGGCTCCAGCTGGCCATGGTAGAATaGCCGCGCCCTGGCATGTGCTGGCGGCGGCTCCTCGAACGCCTC +
Preference number: 1 (lower is better)
Translates to: LSRMHCLRLQLAMVE*PRPGMCWRRLLERL
Trigger: GAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAGGCAGTGCATGCGGCTTAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
3UTR CCA 90 bp GGAAGCAGACGCCACGGGCACAGAGGGAAGGAAGAAGGGAGCTGCTaGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCC +
Preference number: 1 (lower is better)
Translates to: GSRRHGHRGKEEGSC*SLLTASSHLLLRRP
Trigger: GGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR CCA 90 bp GTGCTGGCGGCGGCTCCTCGAACGCCTCTCCCGGCCTTCCTTTCCTaGCCACCCAACCCCTCTTGTGTAAAGCCCACCTCCTGGTGTCCT +
Preference number: 1 (lower is better)
Translates to: VLAAAPRTPLPAFLS*PPNPSCVKPTSWCP
Trigger: AGGACACCAGGAGGTGGGCTTTACACAAGAGGGGTTGGGTGGCCAGGAAAGGAAGGCCGGGAGAGGCGTTCGAGGAGCCGCCGCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
3UTR GCA 90 bp CTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTaGTGTTCACCCACTCCCAGATGGCTGGCAGCAGGCACCAGTAAG +
Preference number: 1 (lower is better)
Translates to: LEVRAPSKRVGEAAG*CSPTPRWLAAGTSK
Trigger: CTTACTGGTGCCTGCTGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR GCA 90 bp GCGGATTTGAGGCTCAGTGCTGCAGTGAAGGCCTGCCCGCCTTCTTaGCCCTTCCCCGCAGCCAGACCACCAGACACAGCCGGAACCAGT +
Preference number: 1 (lower is better)
Translates to: ADLRLSAAVKACPPS*PFPAARPPDTAGTS
Trigger: ACTGGTTCCGGCTGTGTCTGGTGGTCTGGCTGCGGGGAAGGGGCAAGAAGGCGGGCAGGCCTTCACTGCAGCACTGAGCCTCAAATCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR GCA 90 bp ACCACTGCATCCAGCCTCATGCTCCAGAGCGGATTTGAGGCTCAGTaGTGCAGTGAAGGCCTGCCCGCCTTCTTGCCCCTTCCCCGCAGC +
Preference number: 1 (lower is better)
Translates to: TTASSLMLQSGFEAQ*CSEGLPAFLPLPRS
Trigger: GCTGCGGGGAAGGGGCAAGAAGGCGGGCAGGCCTTCACTGCAGCACTGAGCCTCAAATCCGCTCTGGAGCATGAGGCTGGATGCAGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR GCA 90 bp TGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTaGCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGT +
Preference number: 1 (lower is better)
Translates to: WSLLTASSHLLLRRP*PSFSSAWGHRLLSC
Trigger: ACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR GCA 90 bp GGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCCCATCCTaGTCTGGAGCTAAGCACCCTCCTCCCAGAGGGCCTCGCTTCCTT +
Preference number: 1 (lower is better)
Translates to: GQLSIKCFLPGEVPS*SGAKHPPPRGPRFL
Trigger: AAGGAAGCGAGGCCCTCTGGGAGGAGGGTGCTTAGCTCCAGAGCAGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR CCA 90 bp AGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATaGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCC +
Preference number: 1 (lower is better)
Translates to: SHLLLRRPCPSFSSA*GHRLLSCAPRSQSA
Trigger: GGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR GCA 90 bp ACTAACCTTGTAGGAGAGCTGGGCAGCTCTCCATCAAGTGCTTCCTaGCTGGGGAAGTCCCATCCTGCTCTGGAGCTAAGCACCCTCCTC +
Preference number: 1 (lower is better)
Translates to: TNLVGELGSSPSSAS*LGKSHPALELSTLL
Trigger: GAGGAGGGTGCTTAGCTCCAGAGCAGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCTCTCCTACAAGGTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR CCA 90 bp AATGGCCCCAAAGACAGGTCTAGGTCTCCATACCCTGGGAGAATGTaGAAAGCAAGCTCAGGGGCACTGGCAGGCCCTAGCAGGAACAGG +
Preference number: 1 (lower is better)
Translates to: NGPKDRSRSPYPGRM*KASSGALAGPSRNR
Trigger: CCTGTTCCTGCTAGGGCCTGCCAGTGCCCCTGAGCTTGCTTTCCACATTCTCCCAGGGTATGGAGACCTAGACCTGTCTTTGGGGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR TCA 90 bp CCAAGACCAGTCAGGTCCTACCTCTCCCAACTTCCCAGTCCCCCATaGTATGCTACATATATACACACTCCCAGGATGGGAAGCAGACGC +
Preference number: 1 (lower is better)
Translates to: PRPVRSYLSQLPSPP*YATYIHTPRMGSRR
Trigger: GCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGAGGTAGGACCTGACTGGTCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR-3UTR GCA 90 bp GGGAAGGAAGAAGGGAGCTGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGGGGGAAGCGGCGGGGTaGTGTTCACCCACTCCCAGA +
Preference number: 2 (lower is better)
Translates to: GKEEGSCWSLLTASSHLLGEAAG*CSPTPR
Trigger: TCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCC...CAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCCTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR-3UTR GCA 90 bp CAGACCTCGCACCCCGATACCCTGAACGTCCCCACAAGAGCCCAGGAGTTCCATGCCCAGGCCGTAGCTTaGCCCTCCCACAGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: QTSHPDTLNVPTRAQEFHAQAVA*PSHSPG
Trigger: GCCAGGGCTGTGGGAGGGGCAAGCTACGGCCTGGGC...ATGGAACTCCTGGGCTCTTGTGGGGACGTTCAGGGTATCGGGGTGCGAGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR CCA 90 bp CTGCCTCGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTTCACCCACTCCCAGATaGCTGGCAGCAGGCACCAGT +
Preference number: 2 (lower is better)
Translates to: LPRDGAGRPHHHCIQPHASPTPR*LAAGTS
Trigger: ACTGGTGCCTGCTGCCAGCCATCTGGGAGTGGGTGA...AGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR CCA 90 bp GCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGGCTCCTCGACTCATGCTGCCCTTCTaGAAGGTGCCTTCCCCTGTG +
Preference number: 2 (lower is better)
Translates to: AGHGRMPAPWHVLAAAPRLMLPF*KVPSPV
Trigger: CACAGGGGAAGGCACCTTCCAGAAGGGCAGCATGAG...TCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
3UTR-3UTR GCA 90 bp AGCTGCAAGAGCCCAAGGGGGCAGCCTGAGCGGACGACCCCTACATCAGGGCCTCACAGCCCTGGCACCTaGTTCATCAGCTCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: SCKSPRGQPERTTPTSGPHSPGT*FISSQA
Trigger: TGCCTGGGAGCTGATGAAGCAGGTGCCAGGGCTGTG...AGGCCCTGATGTAGGGGTCGTCCGCTCAGGCTGCCCCCTTGGGCTCTTGCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR GCA 90 bp CGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTCCAGAGGGACCCTGTGGTTCATaGTTCCCTAGGTGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: RDGAGRPHHHCIQPHAPEGPCGS*FPRWRA
Trigger: TGCCCTCCACCTAGGGAAGCATGAACCACAGGGTCC...CTCTGGAGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR GCA 90 bp CGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTCCAGAGATCCAGGGTAACTTCTaGCAGCCTCTTCCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: RDGAGRPHHHCIQPHAPEIQGNF*QPLPPA
Trigger: GGCTGGGGGAAGAGGCTGGCAGAAGTTACCCTGGAT...CTCTGGAGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR GCA 90 bp GCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGGCTCCTCGAAGGAAGCTTCCCTCATaGTGCCCTTCTGGAAGGTGC +
Preference number: 2 (lower is better)
Translates to: AGHGRMPAPWHVLAAAPRRKLPS*CPSGRC
Trigger: GCACCTTCCAGAAGGGCAGCATGAGGGAAGCTTCCT...TCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
3UTR-3UTR GCA 90 bp CAGACCTCGCACCCCGATACCCTGAACGTCCCCACAAGAGCCCAGGAGTTCCATCCTCGAGCCACCTGCTaGTCAGGAGACCCTGCCCGT +
Preference number: 2 (lower is better)
Translates to: QTSHPDTLNVPTRAQEFHPRATC*SGDPAR
Trigger: ACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGG...ATGGAACTCCTGGGCTCTTGTGGGGACGTTCAGGGTATCGGGGTGCGAGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR GCA 90 bp AGGCCCCTCTCCACGGCCAGGAACAAGAAACTGAGTATCACCCAGTGCCCCACACCGCCTCGAGCCACCTaGTGCTCAGGAGACCCTGCC +
Preference number: 2 (lower is better)
Translates to: RPLSTARNKKLSITQCPTPPRAT*CSGDPA
Trigger: GGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGG...TGTGGGGCACTGGGTGATACTCAGTTTCTTGTTCCTGGCCGTGGAGAGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR GCA 90 bp AGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTCACCACGGATTTGAGGCTCAGTaGTGCAGTGAAGGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: RAQNKPWLPRDGAGRPHHGFEAQ*CSEGLP
Trigger: GGGCAGGCCTTCACTGCAGCACTGAGCCTCAAATCC...GTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR CCA 90 bp GGGAAGGAAGAAGGGAGCTGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGTCACCCACTCCCAGATaGCTGGCAGCAGGCACCAGT +
Preference number: 2 (lower is better)
Translates to: GKEEGSCWSLLTASSHLLSPTPR*LAAGTS
Trigger: ACTGGTGCCTGCTGCCAGCCATCTGGGAGTGGGTGA...CAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR-3UTR GCA 90 bp CCTTGTAGGAGAGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCGGGGAAGCGGCGGGGTaGTGTTCACCCACTCCCAGA +
Preference number: 2 (lower is better)
Translates to: PCRRAGQLSIKCFLPGEVGEAAG*CSPTPR
Trigger: TCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCC...GACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCTCTCCTACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR GCA 90 bp GGAAGAAGGGAGCTGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGCCCGTCCTTTTCATCTaGATGGGGCCACAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: GRRELLEPANRLEPPAAQPVLFI*MGPQAP
Trigger: AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGG...CTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR-3UTR GCA 90 bp GGGAGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCCTCGAGCCACCTGCTaGTCAGGAGACCCTGCCCGT +
Preference number: 2 (lower is better)
Translates to: GSRVGPNLASGERKATTVPRATC*SGDPAR
Trigger: ACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGG...GACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR GCA 90 bp AGCTGCAAGAGCCCAAGGGGGCAGCCTGAGCGGACGACCCCTACATCAGGGCCTCAGCTCTCCATCAAGTaGTTCCTGCCTGGGGAAGTC +
Preference number: 2 (lower is better)
Translates to: SCKSPRGQPERTTPTSGPQLSIK*FLPGEV
Trigger: GACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTG...AGGCCCTGATGTAGGGGTCGTCCGCTCAGGCTGCCCCCTTGGGCTCTTGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR CCA 90 bp TCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGTCACCCACTCCCAGATaGCTGGCAGCAGGCACCAGT +
Preference number: 2 (lower is better)
Translates to: SLVLLEVRAPSKRVGEAASPTPR*LAAGTS
Trigger: ACTGGTGCCTGCTGCCAGCCATCTGGGAGTGGGTGA...CGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR-3UTR CCA 90 bp TCACAGCAGCCAGTCCCCTTTAGGGCACAAGAAGCCCCATGGCCCACTGCTACCTACACACTCCCAGGATaGGAAGCAGACGCCACGGGC +
Preference number: 2 (lower is better)
Translates to: SQQPVPFRAQEAPWPTATYTLPG*EADATG
Trigger: GCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTA...GGTAGCAGTGGGCCATGGGGCTTCTTGTGCCCTAAAGGGGACTGGCTGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR CCA 90 bp TGCCTGAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGGTAAAGCCCACCTCCTaGTGTCCTTTTCCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: CLRLQLAMVECPRPGMCWVKPTS*CPFPGS
Trigger: GCTTCCTGGAAAAGGACACCAGGAGGTGGGCTTTAC...CCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
3UTR-3UTR GCA 90 bp AGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCCCATCCTGCTCCTGCTCAGGAGACCCTaGCCGTCCTTTTCATCTGCA +
Preference number: 2 (lower is better)
Translates to: SWAALHQVLPAWGSPILLLLRRP*PSFSSA
Trigger: TGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAG...GAGCAGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR GCA 90 bp ATGGCCCACTGCTACCCTCCCCGGGACAAATACACACTTTTGTCGAAGGCCCTCCACAGCCCTGGCACCTaGTTCATCAGCTCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: MAHCYPPRDKYTLLSKALHSPGT*FISSQA
Trigger: TGCCTGGGAGCTGATGAAGCAGGTGCCAGGGCTGTG...GAGGGCCTTCGACAAAAGTGTGTATTTGTCCCGGGGAGGGTAGCAGTGGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR GCA 90 bp CCCGGCCTTCCTTTCCTGGCCACCCAACCCCTCTTGTGTAAAGCCCACCTCCTGCTGACGTCTGCAGGATaGGTGTTACACCCCATTTGG +
Preference number: 2 (lower is better)
Translates to: PGLPFLATQPLLCKAHLLLTSAG*VLHPIW
Trigger: CCAAATGGGGTGTAACACGCATCCTGCAGACGTCAG...CAGGAGGTGGGCTTTACACAAGAGGGGTTGGGTGGCCAGGAAAGGAAGGCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455125.1
3UTR-3UTR CCA 90 bp CCTGACCCCAGCCAAGACCAGTCAGGTCCTACCTCTCCCAACTTCCCAGTCCCCTCCTTTTCATCTGCATaGGGCCACAGGCTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: PDPSQDQSGPTSPNFPVPSFSSA*GHRLLS
Trigger: AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGA...GGGGACTGGGAAGTTGGGAGAGGTAGGACCTGACTGGTCTTGGCTGGGGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR-3UTR TCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGGGCTCAGTGCTGCAGTaGAGGCCTGCCCGCCTTCTT +
Preference number: 2 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGGSVLQ*RPARLL
Trigger: AAGAAGGCGGGCAGGCCTTCACTGCAGCACTGAGCC...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR GCA 90 bp GGGAGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCCATCAAGTGCTTCCTaGCTGGGGAAGTCCCATCCT +
Preference number: 2 (lower is better)
Translates to: GSRVGPNLASGERKATTVPSSAS*LGKSHP
Trigger: AGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGG...GACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR GCA 90 bp CTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATCCGCCTCGAGCCACCTaGTGCTCAGGAGACCCTGCC +
Preference number: 2 (lower is better)
Translates to: LPTSQSPMICYIYTHSQDPPRAT*CSGDPA
Trigger: GGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGG...ATCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR-3UTR CCA 90 bp TACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGAAGAAGGGAGCTGCTaGAGCCTGCTAACCGCCTCG +
Preference number: 2 (lower is better)
Translates to: YIYTHSQDGKQTPRAQREEEGSC*SLLTAS
Trigger: CGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTC...TTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR-3UTR GCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAACTGCTCAGGAGACCCTaGCCGTCCTTTTCATCTGCA +
Preference number: 2 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKELLRRP*PSFSSA
Trigger: TGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAG...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR-3UTR GCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGACCTCGAGCCACCTGCTaGTCAGGAGACCCTGCCCGT +
Preference number: 2 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGPRATC*SGDPAR
Trigger: ACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGG...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR-3UTR GCA 90 bp ATAACCCCAGATGCTAATGGCCCCAAAGACAGGTCTAGGTCTCCATACCCTGGGGGGGAAGTCCCATCCTaGTCTGGAGCTAAGCACCCT +
Preference number: 2 (lower is better)
Translates to: ITPDANGPKDRSRSPYPGGEVPS*SGAKHP
Trigger: AGGGTGCTTAGCTCCAGAGCAGGATGGGACTTCCCC...CCCAGGGTATGGAGACCTAGACCTGTCTTTGGGGCCATTAGCATCTGGGGTTAT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR GCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGTACCTGAACAAGAGCTaGAAGAGCCCAAGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGYLNKS*KSPRGQ
Trigger: CTGCCCCCTTGGGCTCTTGCAGCTCTTGTTCAGGTA...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR GCA 72 bp CAGCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTaGTGGCGGCGGCTCCTCGAACGCCTCTCCCGGCCT +
Preference number: 3 (lower is better)
Translates to: QLAMVECPRPGM*WRRLLERLSRP
Trigger: AGGCCGGGAGAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
3UTR CCA 72 bp CTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTaGCGGCGGCTCCTCGAACGCCTCTCCCGGCCTTCC +
Preference number: 3 (lower is better)
Translates to: LAMVECPRPGMC*RRLLERLSRPS
Trigger: GGAAGGCCGGGAGAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
3UTR GCA 72 bp AGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTaGTGTTCACCCACTCCCAGATGGCTGGCAGCAGGC +
Preference number: 3 (lower is better)
Translates to: RAPSKRVGEAAG*CSPTPRWLAAG
Trigger: GCCTGCTGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR CCA 72 bp GAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGCCCTaGCATGTGCTGGCGGCGGCTCCTCGAACGCCTCTC +
Preference number: 3 (lower is better)
Translates to: EAPAGHGRMPAP*HVLAAAPRTPL
Trigger: GAGAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGCTGGAGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
3UTR CCA 72 bp CAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATaGAGCGGGGCGGCCTCACCACCACTGCATCCAGCC +
Preference number: 3 (lower is better)
Translates to: QESAKQTLAASG*SGAASPPLHPA
Trigger: GGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR CAA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTGGGAAGCCTACAGGGTaGGCCCTGGGCCCCTTAGAA +
Preference number: 3 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPGKPTG*ALGPLE
Trigger: TTCTAAGGGGCCCAGGGCCAACCCTGTAGGCTTCCC...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR CAA 90 bp CCTGGCATGTGCTGGCGGCGGCTCCTCGAACGCCTCTCCCGGCCTTCCTTTCCTGCCACCCAACCCCTCTaGTGTAAAGCCCACCTCCTG +
Preference number: 3 (lower is better)
Translates to: PGMCWRRLLERLSRPSFPATQPL*CKAHLL
Trigger: CAGGAGGTGGGCTTTACACAAGAGGGGTTGGGTGGC...AGGAAAGGAAGGCCGGGAGAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
3UTR CCA 72 bp GCGGCTCCTCGAACGCCTCTCCCGGCCTTCCTTTCCTaGCCACCCAACCCCTCTTGTGTAAAGCCCACCTCC +
Preference number: 3 (lower is better)
Translates to: AAPRTPLPAFLS*PPNPSCVKPTS
Trigger: GGAGGTGGGCTTTACACAAGAGGGGTTGGGTGGCCAGGAAAGGAAGGCCGGGAGAGGCGTTCGAGGAGCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
3UTR GCA 72 bp CTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTaGCCGTCCTTTTCATCTGCATGGGGCCACAGGCTC +
Preference number: 3 (lower is better)
Translates to: LTASSHLLLRRP*PSFSSAWGHRL
Trigger: GAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
3UTR GCA 72 bp AGCCTCATGCTCCAGAGCGGATTTGAGGCTCAGTGCTaGAGTGAAGGCCTGCCCGCCTTCTTGCCCCTTCCC +
Preference number: 3 (lower is better)
Translates to: SLMLQSGFEAQC*SEGLPAFLPLP
Trigger: GGGAAGGGGCAAGAAGGCGGGCAGGCCTTCACTGCAGCACTGAGCCTCAAATCCGCTCTGGAGCATGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR TCA 72 bp CCTGAACAAGAGCTGCAAGAGCCCAAGGGGGCAGCCTaGGCGGACGACCCCTACATCAGGGCCTGGTTAGAT +
Preference number: 3 (lower is better)
Translates to: PEQELQEPKGAA*ADDPYIRAWLD
Trigger: ATCTAACCAGGCCCTGATGTAGGGGTCGTCCGCTCAGGCTGCCCCCTTGGGCTCTTGCAGCTCTTGTTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR GCA 72 bp TCCATCAAGTGCTTCCTGCCTGGGGAAGTCCCATCCTaGTCTGGAGCTAAGCACCCTCCTCCCAGAGGGCCT +
Preference number: 3 (lower is better)
Translates to: SIKCFLPGEVPS*SGAKHPPPRGP
Trigger: AGGCCCTCTGGGAGGAGGGTGCTTAGCTCCAGAGCAGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR-3UTR CAA 90 bp AGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTCACCACGACAAATACACACTTTaGTCGAAGGCCCTCAGGGAC +
Preference number: 3 (lower is better)
Translates to: RAQNKPWLPRDGAGRPHHDKYTL*SKALRD
Trigger: GTCCCTGAGGGCCTTCGACAAAAGTGTGTATTTGTC...GTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR TCA 72 bp CTGCCCCACAGAGAACAAACCAGAAGGGCGACTACCTaGACAAGAGCTGCAAGAGCCCAAGGGGGCAGCCTG +
Preference number: 3 (lower is better)
Translates to: LPHREQTRRATT*TRAARAQGGSL
Trigger: CAGGCTGCCCCCTTGGGCTCTTGCAGCTCTTGTTCAGGTAGTCGCCCTTCTGGTTTGTTCTCTGTGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR GCA 72 bp GTAGGAGAGCTGGGCAGCTCTCCATCAAGTGCTTCCTaGCTGGGGAAGTCCCATCCTGCTCTGGAGCTAAGC +
Preference number: 3 (lower is better)
Translates to: VGELGSSPSSAS*LGKSHPALELS
Trigger: GCTTAGCTCCAGAGCAGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCTCTCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
3UTR GCA 72 bp AGAACAAACCAGAAGGGCGACTACCTGAACAAGAGCTaGAAGAGCCCAAGGGGGCAGCCTGAGCGGACGACC +
Preference number: 3 (lower is better)
Translates to: RTNQKGDYLNKS*KSPRGQPERTT
Trigger: GGTCGTCCGCTCAGGCTGCCCCCTTGGGCTCTTGCAGCTCTTGTTCAGGTAGTCGCCCTTCTGGTTTGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCGCCGCCAGCTCCTGCTaGAGGCCGGCCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QACGGSGGVLFTHSQMAGAASSC*RPASWS
Trigger: GGACCAGCTGGCCGGCCTGCAGCAGGAGCTGGCGGC...GCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTGCCTCGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTAGAGCCGCCAGCTCCTaGTGCAGGCCGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPRDGAGRPHHHCIQPHARAASS*CRPASW
Trigger: CCAGCTGGCCGGCCTGCAGCAGGAGCTGGCGGCTCT...AGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGCCCGGGGCCGGGTTaGGGCAGTCGGCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGCPGPG*GSRPLP
Trigger: GGGCAAAGGCCGACTGCCCCAACCCGGCCCCGGGCA...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS-3UTR CCA 90 bp CAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCGGACGGGCCCAGCTGTaGCGCTGGGGACAGGCGCTT +
Preference number: 4 (lower is better)
Translates to: QACGGSGGVLFTHSQMAGGRAQL*RWGQAL
Trigger: AAGCGCCTGTCCCCAGCGCCACAGCTGGGCCCGTCC...GCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTCCAGAGCCCAAGGGGGCAGCCTaGGCGGACGACCCCTACATC +
Preference number: 4 (lower is better)
Translates to: RDGAGRPHHHCIQPHAPEPKGAA*ADDPYI
Trigger: GATGTAGGGGTCGTCCGCTCAGGCTGCCCCCTTGGG...CTCTGGAGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTGGGGCAGTCGGCCTTTaGCCTCCTCCTCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPGAVGL*PPPPGR
Trigger: CCTCCCGGGAGGAGGAGGGCAAAGGCCGACTGCCCC...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS-3UTR GCA 90 bp AAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCAGCCCGCTGGCCCTGCTaGTCTCTGAGCCACCCGTGC +
Preference number: 4 (lower is better)
Translates to: KRVGEAAGCCSPTPRWLAARWPC*SLSHPC
Trigger: GCACGGGTGGCTCAGAGAGCAGCAGGGCCAGCGGGC...TGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCGCCGCCAGCTCCTGCTaGAGGCCGGCCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PANRLEPPAAQETLPVLFAASSC*RPASWS
Trigger: GGACCAGCTGGCCGGCCTGCAGCAGGAGCTGGCGGC...GAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGGCTCCTCGACTCCAGGGCGTAGTCTaGCAGCCCGATGCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: AGHGRMPAPWHVLAAAPRLQGVV*QPDAVL
Trigger: GAGGACCGCATCGGGCTGGCAGACTACGCCCTGGAG...TCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR GCA 90 bp CTGCCTCGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTCCGCCTCGAGCCACCTaGTGCTCAGGAGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: LPRDGAGRPHHHCIQPHAPPRAT*CSGDPA
Trigger: GGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGG...AGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCGCCTCGAGCCACCTaGTGCTCAGGAGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: SERRASVWGKRRGAVHPLPPRAT*CSGDPA
Trigger: GGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGG...GAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGCCAGGGAGCACCTGCTaGCTGGATGGGGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: EAPAGHGRMPAPWHVLAAPGSTC*LDGESA
Trigger: CGCAGACTCCCCATCCAGGCAGCAGGTGCTCCCTGG...CGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGCTGGAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CCA 90 bp GCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGGCTCCTCGACGGGGTGACTGGGAGTaGTACCACAGGGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: AGHGRMPAPWHVLAAAPRRGDWE*YHRGMP
Trigger: CGGCATCCCCCTGTGGTACCACTCCCAGTCACCCCG...TCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CCA 90 bp CGCCCTGGCATGTGCTGGCGGCGGCTCCTCGAACGCCTCTCCCGGCCTTCCTTTGGAGCACCTGCTGCCTaGATGGGGAGTCTGCGCCAC +
Preference number: 4 (lower is better)
Translates to: RPGMCWRRLLERLSRPSFGAPAA*MGSLRH
Trigger: GTGGCGCAGACTCCCCATCCAGGCAGCAGGTGCTCC...AAAGGAAGGCCGGGAGAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR TCA 90 bp CAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCTGCATCTCCTCTCTCTaGAGGAGCCCCACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: QACGGSGGVLFTHSQMAGCISSL*RSPTRP
Trigger: GGGCCGCGTGGGGCTCCTTCAGAGAGAGGAGATGCA...GCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp TGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCCGCACCCCGATACCCTaGACGTCCCCACAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: WSLLTASSHLLLRRPCPSRTPIP*TSPQEP
Trigger: GGGCTCTTGTGGGGACGTTCAGGGTATCGGGGTGCG...GGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CTGCCTCGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTCTCCGCTGCTGCTGCTaGCGTCATCGTCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPRDGAGRPHHHCIQPHALRCCC*RHRHPG
Trigger: CCCAGGGTGACGATGACGGCAGCAGCAGCAGCGGAG...AGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCTCTGAGCCACCCGTaGCTCTCCTCCTCCGCACCC +
Preference number: 4 (lower is better)
Translates to: CWSLLTASSHLLLRRPCPSLSHP*LSSSAP
Trigger: GGGTGCGGAGGAGGAGAGGCACGGGTGGCTCAGAGA...CGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCACAAGCCCGCTGGCCCTaGTGCTCTCTGAGCCACCCG +
Preference number: 4 (lower is better)
Translates to: KRVGEAAGCCSPTPRWLAQARWP*CSLSHP
Trigger: CGGGTGGCTCAGAGAGCAGCAGGGCCAGCGGGCTTG...TGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCCCTCATCCGGCCTCCTaGTGTCCTTCGCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: QACGGSGGVLFTHSQMAGPHPAS*CPSLPT
Trigger: GGTGGGCAGCGAAGGACAGCAGGAGGCCGGATGAGG...GCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCTCCGCCACCGAGCTCTaGTTCAGTGCCAGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: SERRASVWGKRRGAVHPLSATEL*FSARAA
Trigger: GGCGGCTCTGGCACTGAAGCAGAGCTCGGTGGCGGA...GAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTGCCTCGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTGGGGAAGCGGCGGGGTaGTGTTCACCCACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LPRDGAGRPHHHCIQPHAGEAAG*CSPTPR
Trigger: TCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCC...AGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCCCTCGAGCCACCTGCTaGTCAGGAGACCCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: QACGGSGGVLFTHSQMAGPRATC*SGDPAR
Trigger: ACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGG...GCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCGCCCAGGCCGTAGCTTaGCCCTCCCACAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PANRLEPPAAQETLPVLFAQAVA*PSHSPG
Trigger: GCCAGGGCTGTGGGAGGGGCAAGCTACGGCCTGGGC...GAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTCACAGCCGGAACCAGTaGCCCAGGCCCCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPHSRNQ*PRPLST
Trigger: CGTGGAGAGGGGCCTGGGGCACTGGTTCCGGCTGTG...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp AAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCAGCCTGCCCGCCTTCTTaGCCCTTCCCCGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: KRVGEAAGCCSPTPRWLAACPPS*PFPAAR
Trigger: TCTGGCTGCGGGGAAGGGGCAAGAAGGCGGGCAGGC...TGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCGGACGGGCCCAGCTGTaGCGCTGGGGACAGGCGCTT +
Preference number: 4 (lower is better)
Translates to: PANRLEPPAAQETLPVLFGRAQL*RWGQAL
Trigger: AAGCGCCTGTCCCCAGCGCCACAGCTGGGCCCGTCC...GAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp AAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCAGCCCCACAAGCCCGCTaGCCCTGCTGCTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: KRVGEAAGCCSPTPRWLAAPQAR*PCCSLS
Trigger: GCTCAGAGAGCAGCAGGGCCAGCGGGCTTGTGGGGC...TGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTTCGTCCCGCACGGCCTaGATCTGCTGGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPSSRTA*ICWGSR
Trigger: CCTGCTGCCCCAGCAGATCCAGGCCGTGCGGGACGA...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp GGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGGCTCCTCGAACGCCTCTCGCCTGGGTGCACATCTaGCTGGAGGATGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: GRMPAPWHVLAAAPRTPLAWVHI*LEDDSG
Trigger: CCCCGAGTCATCCTCCAGCCAGATGTGCACCCAGGC...GAGAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR TCA 90 bp GGGAAGGAAGAAGGGAGCTGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCCTGGGAGTAGCGCGTaGGGCGCTGGCTTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: GKEEGSCWSLLTASSHLLPGSSA*GAGFFG
Trigger: CCCGAAGAAGCCAGCGCCTCACGCGCTACTCCCAGG...CAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCCTTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCGACGCTGGCCCCTCCTaGCTCCAGGGCGTAGTCTGC +
Preference number: 4 (lower is better)
Translates to: PANRLEPPAAQETLPVLFDAGPS*LQGVVC
Trigger: GCAGACTACGCCCTGGAGTCAGGAGGGGCCAGCGTC...GAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCGGCTCAGTGCTGCAGTaGAGGCCTGCCCGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QACGGSGGVLFTHSQMAGGSVLQ*RPARLL
Trigger: AAGAAGGCGGGCAGGCCTTCACTGCAGCACTGAGCC...GCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTTCTCTGAGCCACCCGTaGCTCTCCTCCTCCGCACCC +
Preference number: 4 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPSLSHP*LSSSAP
Trigger: GGGTGCGGAGGAGGAGAGGCACGGGTGGCTCAGAGA...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp GCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTGCCCGCTGGCCCTGCTaGTCTCTGAGCCACCCGTGC +
Preference number: 4 (lower is better)
Translates to: AAQETLPVLFICMGPQAPARWPC*SLSHPC
Trigger: GCACGGGTGGCTCAGAGAGCAGCAGGGCCAGCGGGC...AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCAGAGCCGCCAGCTCCTaGTGCAGGCCGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLRRPCPSFSSAWGHRLLRAASS*CRPASW
Trigger: CCAGCTGGCCGGCCTGCAGCAGGAGCTGGCGGCTCT...GAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTCCTCGAGCCACCTGCTaGTCAGGAGACCCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPPRATC*SGDPAR
Trigger: ACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGG...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGCCTCGAGCCACCTGCTaGTCAGGAGACCCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGPRATC*SGDPAR
Trigger: ACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGG...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTAGGGCCTCGCTTCCTTaGCCAGGGGCAGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPRASLP*PGAEAA
Trigger: AGCTGCCTCTGCCCCTGGGCAAGGAAGCGAGGCCCT...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp AAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCACCAGGAAGTCCTCGGTaGCCTTGCGCCCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: KRVGEAAGCCSPTPRWLAPGSPR*PCAPQA
Trigger: GGCTTGTGGGGCGCAAGGCCACCGAGGACTTCCTGG...TGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp AGCTGCAAGAGCCCAAGGGGGCAGCCTGAGCGGACGACCCCTACATCAGGGCCTCGAGCCTCGGACTCCTaGGAGGCCCGGACGATCTTC +
Preference number: 4 (lower is better)
Translates to: SCKSPRGQPERTTPTSGPRASDS*EARTIF
Trigger: GAAGATCGTCCGGGCCTCCCAGGAGTCCGAGGCTCG...AGGCCCTGATGTAGGGGTCGTCCGCTCAGGCTGCCCCCTTGGGCTCTTGCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp TGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGCGAGCCTCGGACTCCTaGGAGGCCCGGACGATCTTC +
Preference number: 4 (lower is better)
Translates to: CAPRSQSAEQACGGSGGVRASDS*EARTIF
Trigger: GAAGATCGTCCGGGCCTCCCAGGAGTCCGAGGCTCG...CACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGACGGCCTGGATCTGCTaGGGCAGCAGGCCCACTTCT +
Preference number: 4 (lower is better)
Translates to: CWSLLTASSHLLLRRPCPTAWIC*GSRPTS
Trigger: AGAAGTGGGCCTGCTGCCCCAGCAGATCCAGGCCGT...CGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCGGCCCAGCAGTTGCCTaGGTGCACATCTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SERRASVWGKRRGAVHPLGPAVA*VHIWLE
Trigger: CTCCAGCCAGATGTGCACCCAGGCAACTGCTGGGCC...GAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp GGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGGCTCCTCGAACGCCTCTCAAGCCTTGTGGCCCCTaGAAGGCCCAGCAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: GRMPAPWHVLAAAPRTPLKPCGP*KAQQLP
Trigger: AGGCAACTGCTGGGCCTTCCAGGGGCCACAAGGCTT...GAGAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CCA 90 bp AAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCACACGGCGAAGCCTTGTaGCCCCTGGAAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KRVGEAAGCCSPTPRWLAHGEAL*PLEGPA
Trigger: TGCTGGGCCTTCCAGGGGCCACAAGGCTTCGCCGTG...TGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CTGCCTCGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTCGCAGCTCCACCACCTaGTACGTGGCCATCGTAGGG +
Preference number: 4 (lower is better)
Translates to: LPRDGAGRPHHHCIQPHARSSTT*YVAIVG
Trigger: CCCTACGATGGCCACGTACCAGGTGGTGGAGCTGCG...AGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp TGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCCGCAGCTCCACCACCTaGTACGTGGCCATCGTAGGG +
Preference number: 4 (lower is better)
Translates to: WSLLTASSHLLLRRPCPSRSSTT*YVAIVG
Trigger: CCCTACGATGGCCACGTACCAGGTGGTGGAGCTGCG...GGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGCCTCGGGCAAGGAACTaGCTGATCCAGGCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGPRARN*LIQAGN
Trigger: GTTCCCGGCCTGGATCAGTCAGTTCCTTGCCCGAGG...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp TGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGGAGGATGACTCGGGGTaGCTGGGAGTGGTACCACAG +
Preference number: 4 (lower is better)
Translates to: CWSLLTASSHLLLRRPCPEDDSG*LGVVPQ
Trigger: CTGTGGTACCACTCCCAGTCACCCCGAGTCATCCTC...CGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCCATCTGGCTGGAGGATaGCTCGGGGTGACTGGGAGT +
Preference number: 4 (lower is better)
Translates to: QACGGSGGVLFTHSQMAGHLAGG*LGVTGS
Trigger: ACTCCCAGTCACCCCGAGTCATCCTCCAGCCAGATG...GCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp GGAAGAAGGGAGCTGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGCGCACCCCGATACCCTaGACGTCCCCACAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: GRRELLEPANRLEPPAAQRTPIP*TSPQEP
Trigger: GGGCTCTTGTGGGGACGTTCAGGGTATCGGGGTGCG...CTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp CGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGCCCAAGGGGGCAGCCTaGGCGGACGACCCCTACATC +
Preference number: 4 (lower is better)
Translates to: RLEPPAAQETLPVLFICMPKGAA*ADDPYI
Trigger: GATGTAGGGGTCGTCCGCTCAGGCTGCCCCCTTGGG...CATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGGGCTCAGTGCTGCAGTaGAGGCCTGCCCGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGGSVLQ*RPARLL
Trigger: AAGAAGGCGGGCAGGCCTTCACTGCAGCACTGAGCC...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGTCCCTCCGCTGCTGCTaGTGCCGTCATCGTCACCCT +
Preference number: 4 (lower is better)
Translates to: CAPRSQSAEQACGGSGGVSLRCC*CRHRHP
Trigger: AGGGTGACGATGACGGCAGCAGCAGCAGCGGAGGGA...CACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGCAAGCCCGCTGGCCCTaGTGCTCTCTGAGCCACCCG +
Preference number: 4 (lower is better)
Translates to: RLEPPAAQETLPVLFICMQARWP*CSLSHP
Trigger: CGGGTGGCTCAGAGAGCAGCAGGGCCAGCGGGCTTG...CATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCCTCCAGGGCGTAGTCTaGCAGCCCGATGCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PANRLEPPAAQETLPVLFLQGVV*QPDAVL
Trigger: GAGGACCGCATCGGGCTGGCAGACTACGCCCTGGAG...GAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTGAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGGGAAGGCCCAGCAGTTaGCTGGGTGCACATCTGGCT +
Preference number: 4 (lower is better)
Translates to: LRLQLAMVECPRPGMCWRGRPSS*LGAHLA
Trigger: AGCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCC...CCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR GCA 90 bp AAGCCGCATGCACTGCCTGAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGCCCCTGGCCATGGTAGAATaGCCGCGCCCTGGCATGTGC +
Preference number: 4 (lower is better)
Translates to: KPHALPEAPAGHGRMPAPLAMVE*PRPGMC
Trigger: GCACATGCCAGGGCGCGGGCATTCTACCATGGCCAG...GGGCGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAGGCAGTGCATGCGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CCA 90 bp CCTGACCCCAGCCAAGACCAGTCAGGTCCTACCTCTCCCAACTTCCCAGTCCCCGCCCCACAAGCCCGCTaGCCCTGCTGCTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PDPSQDQSGPTSPNFPVPAPQAR*PCCSLS
Trigger: GCTCAGAGAGCAGCAGGGCCAGCGGGCTTGTGGGGC...GGGGACTGGGAAGTTGGGAGAGGTAGGACCTGACTGGTCTTGGCTGGGGTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTGCCGGCCTGGCGAAGTaGCCACCATCCAGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPAGLAK*PPSRVR
Trigger: CCTTACTCTGGATGGTGGCCACTTCGCCAGGCCGGC...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTCCAGAGGACGTTCCAGCCGCATaGCCTCCTTCTGCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RDGAGRPHHHCIQPHAPEDVPAA*PPSASW
Trigger: CCAACTGGCAGAAGGAGGCCATGCGGCTGGAACGTC...CTCTGGAGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTACGGCCTGGATCTGCTaGGGCAGCAGGCCCACTTCT +
Preference number: 4 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPTAWIC*GSRPTS
Trigger: AGAAGTGGGCCTGCTGCCCCAGCAGATCCAGGCCGT...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CCTGACCCCAGCCAAGACCAGTCAGGTCCTACCTCTCCCAACTTCCCAGTCCCCTCGTCCCGCACGGCCTaGATCTGCTGGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PDPSQDQSGPTSPNFPVPSSRTA*ICWGSR
Trigger: CCTGCTGCCCCAGCAGATCCAGGCCGTGCGGGACGA...GGGGACTGGGAAGTTGGGAGAGGTAGGACCTGACTGGTCTTGGCTGGGGTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCATGACTCGGGGTGACTaGGAGTGGTACCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: QACGGSGGVLFTHSQMAGMTRGD*EWYHRG
Trigger: CCCCCTGTGGTACCACTCCCAGTCACCCCGAGTCAT...GCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp AAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCAGCCTGGGTGCACATCTaGCTGGAGGATGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: KRVGEAAGCCSPTPRWLAAWVHI*LEDDSG
Trigger: CCCCGAGTCATCCTCCAGCCAGATGTGCACCCAGGC...TGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTCCAGAGTCACCCACTCCCAGATaGCTGGCAGCAGGCACCAGT +
Preference number: 4 (lower is better)
Translates to: RDGAGRPHHHCIQPHAPESPTPR*LAAGTS
Trigger: ACTGGTGCCTGCTGCCAGCCATCTGGGAGTGGGTGA...CTCTGGAGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCTCACCCACTCCCAGATaGCTGGCAGCAGGCACCAGT +
Preference number: 4 (lower is better)
Translates to: QACGGSGGVLFTHSQMAGSPTPR*LAAGTS
Trigger: ACTGGTGCCTGCTGCCAGCCATCTGGGAGTGGGTGA...GCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTACACACTCCCAGGATaGGAAGCAGACGCCACGGGC +
Preference number: 4 (lower is better)
Translates to: WSLLTASSHLLLRRPCPSYTLPG*EADATG
Trigger: GCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTA...GGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGCCCTACATCAGGGCCTaGTTAGATGTGGGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: CWSLLTASSHLLLRRPCPPYIRA*LDVGAG
Trigger: ACCGGCCCCCACATCTAACCAGGCCCTGATGTAGGG...CGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp GGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGGCTCCTCGAACGCCTCTCCTCATGCTGCCCTTCTaGAAGGTGCCTTCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: GRMPAPWHVLAAAPRTPLLMLPF*KVPSPV
Trigger: CACAGGGGAAGGCACCTTCCAGAAGGGCAGCATGAG...GAGAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR TCA 90 bp CAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCTTAAACAGGGTGCTCTaGCTCCCAGCCACCGAGCTC +
Preference number: 4 (lower is better)
Translates to: QACGGSGGVLFTHSQMAGLNRVL*LPATEL
Trigger: GAGCTCGGTGGCTGGGAGTCAGAGCACCCTGTTTAA...GCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCCCTCGGGCAAGGAACTaGCTGATCCAGGCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: PANRLEPPAAQETLPVLFPRARN*LIQAGN
Trigger: GTTCCCGGCCTGGATCAGTCAGTTCCTTGCCCGAGG...GAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp TCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGTGCATCTCCTCTCTCTaGAGGAGCCCCACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SLVLLEVRAPSKRVGEAACISSL*RSPTRP
Trigger: GGGCCGCGTGGGGCTCCTTCAGAGAGAGGAGATGCA...CGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp AGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCCCATCCTGCTCGACGCTGGCCCCTCCTaGCTCCAGGGCGTAGTCTGC +
Preference number: 4 (lower is better)
Translates to: SWAALHQVLPAWGSPILLDAGPS*LQGVVC
Trigger: GCAGACTACGCCCTGGAGTCAGGAGGGGCCAGCGTC...GAGCAGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTGACGCTGGCCCCTCCTaGCTCCAGGGCGTAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSDAGPS*LQGVVC
Trigger: GCAGACTACGCCCTGGAGTCAGGAGGGGCCAGCGTC...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGGAGGATGACTCGGGGTaGCTGGGAGTGGTACCACAG +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGEDDSG*LGVVPQ
Trigger: CTGTGGTACCACTCCCAGTCACCCCGAGTCATCCTC...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp TGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGGAGGATGACTCGGGGTaGCTGGGAGTGGTACCACAG +
Preference number: 4 (lower is better)
Translates to: CAPRSQSAEQACGGSGGVEDDSG*LGVVPQ
Trigger: CTGTGGTACCACTCCCAGTCACCCCGAGTCATCCTC...CACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CTCATGCTGCCCTTCTGGAAGGTGCCTTCCCCTGTGCTGACGTCTGCAGGATGCGCCGCATGCACTGCCTaGGGCTCCAGCTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LMLPFWKVPSPVLTSAGCAACTA*GSSWPW
Trigger: CCATGGCCAGCTGGAGCCTCAGGCAGTGCATGCGGC...GCATCCTGCAGACGTCAGCACAGGGGAAGGCACCTTCCAGAAGGGCAGCATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR GCA 90 bp CCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCGCAGAGGCTGGGAACTaGCTGTCCCTGGAAACGGCC +
Preference number: 4 (lower is better)
Translates to: PANRLEPPAAQETLPVLFAEAGN*LSLETA
Trigger: GGCCGTTTCCAGGGACAGGCAGTTCCCAGCCTCTGC...GAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS-3UTR GCA 90 bp CAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCGTAGTAGGAGGTGTGTaGATCAGAGGACGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QACGGSGGVLFTHSQMAGVVGGV*IRGRAQ
Trigger: CTGGGCCCGTCCTCTGATGCACACACCTCCTACTAC...GCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCCCTGCTGTCCTTCGCTaGCCACCAGGAAACCAAAGC +
Preference number: 4 (lower is better)
Translates to: WSLLTASSHLLLRRPCPSPAVLR*PPGNQS
Trigger: GCTTTGGTTTCCTGGTGGGCAGCGAAGGACAGCAGG...GGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGCCTCATCCGGCCTCCTaGTGTCCTTCGCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: RLEPPAAQETLPVLFICMPHPAS*CPSLPT
Trigger: GGTGGGCAGCGAAGGACAGCAGGAGGCCGGATGAGG...CATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTCACCACACTTCAGCTGCTGGATaGGAGCCTCGGACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RAQNKPWLPRDGAGRPHHTSAAG*EPRTPG
Trigger: CCCAGGAGTCCGAGGCTCGCATCCAGCAGCTGAAGT...GTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTCCAGAGCACTCTGACTTCAGCTaGTGGATGCGAGCCTCGGAC +
Preference number: 4 (lower is better)
Translates to: RDGAGRPHHHCIQPHAPEHSDFS*WMRASD
Trigger: GTCCGAGGCTCGCATCCAGCAGCTGAAGTCAGAGTG...CTCTGGAGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp GCTACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGGCCGCCAGCTCCTGCTaGAGGCCGGCCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ATYIHTPRMGSRRHGHRGAASSC*RPASWS
Trigger: GGACCAGCTGGCCGGCCTGCAGCAGGAGCTGGCGGC...CCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCCTCCAGGGCGTAGTCTaGCAGCCCGATGCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LLRRPCPSFSSAWGHRLLLQGVV*QPDAVL
Trigger: GAGGACCGCATCGGGCTGGCAGACTACGCCCTGGAG...GAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGGGAAGGCCCAGCAGTTaGCTGGGTGCACATCTGGCT +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGGRPSS*LGAHLA
Trigger: AGCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCC...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CAGCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGGCTCCTCAGTGTCCCCTCCTGCTaGAGGTCTTCGTCAAACCCA +
Preference number: 4 (lower is better)
Translates to: QLAMVECPRPGMCWRRLLSVPSC*RSSSNP
Trigger: TGGGTTTGACGAAGACCTGCAGCAGGAGGGGACACT...GAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR GCA 90 bp CGCCCTGGCATGTGCTGGCGGCGGCTCCTCGAACGCCTCTCCCGGCCTTCCTTTAGGAGTGTCCCCTCCTaGTGCAGGTCTTCGTCAAAC +
Preference number: 4 (lower is better)
Translates to: RPGMCWRRLLERLSRPSFRSVPS*CRSSSN
Trigger: GTTTGACGAAGACCTGCAGCAGGAGGGGACACTCCT...AAAGGAAGGCCGGGAGAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR GCA 90 bp TGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGGGGGAAGTCCCATCCTaGTCTGGAGCTAAGCACCCT +
Preference number: 4 (lower is better)
Translates to: CWSLLTASSHLLLRRPCPGEVPS*SGAKHP
Trigger: AGGGTGCTTAGCTCCAGAGCAGGATGGGACTTCCCC...CGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCACAGCCGGAACCAGTaGCCCAGGCCCCTCTCCACG +
Preference number: 4 (lower is better)
Translates to: HGATGSSLVLLEVRAPSKHSRNQ*PRPLST
Trigger: CGTGGAGAGGGGCCTGGGGCACTGGTTCCGGCTGTG...CTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp AAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCAAAAACAAACCCTGGCTaGCTCGGGATGGAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: KRVGEAAGCCSPTPRWLAKTNPG*LGMERG
Trigger: GCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTT...TGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp GGGAGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCGGACGGGCCCAGCTGTaGCGCTGGGGACAGGCGCTT +
Preference number: 4 (lower is better)
Translates to: GSRVGPNLASGERKATTVGRAQL*RWGQAL
Trigger: AAGCGCCTGTCCCCAGCGCCACAGCTGGGCCCGTCC...GACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTCAGGCGGTACCAGGTaGTGCCAGCCCACCAGTAGA +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGSGGTR*CQPTSR
Trigger: TCTACTGGTGGGCTGGCACCACCTGGTACCGCCTGA...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTCCAGAGTCTGACTTCAGCTGCTaGATGCGAGCCTCGGACTCC +
Preference number: 4 (lower is better)
Translates to: RDGAGRPHHHCIQPHAPESDFSC*MRASDS
Trigger: GGAGTCCGAGGCTCGCATCCAGCAGCTGAAGTCAGA...CTCTGGAGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CCTGACCCCAGCCAAGACCAGTCAGGTCCTACCTCTCCCAACTTCCCAGTCCCCCGGGGTGACTGGGAGTaGTACCACAGGGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: PDPSQDQSGPTSPNFPVPRGDWE*YHRGMP
Trigger: CGGCATCCCCCTGTGGTACCACTCCCAGTCACCCCG...GGGGACTGGGAAGTTGGGAGAGGTAGGACCTGACTGGTCTTGGCTGGGGTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCCGGGGTGACTGGGAGTaGTACCACAGGGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: LLRRPCPSFSSAWGHRLLRGDWE*YHRGMP
Trigger: CGGCATCCCCCTGTGGTACCACTCCCAGTCACCCCG...GAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp AAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCAGGGTGCACATCTGGCTaGAGGATGACTCGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: KRVGEAAGCCSPTPRWLAGCTSG*RMTRGD
Trigger: GTCACCCCGAGTCATCCTCCAGCCAGATGTGCACCC...TGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGCACGGCGAAGCCTTGTaGCCCCTGGAAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLVLLEVRAPSKRVGEAAHGEAL*PLEGPA
Trigger: TGCTGGGCCTTCCAGGGGCCACAAGGCTTCGCCGTG...CGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp GCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCACGGCGAAGCCTTGTaGCCCCTGGAAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AAQETLPVLFICMGPQAPHGEAL*PLEGPA
Trigger: TGCTGGGCCTTCCAGGGGCCACAAGGCTTCGCCGTG...AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGGAAGAAGGGAGCTGCTaGAGCCTGCTAACCGCCTCG +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGEEGSC*SLLTAS
Trigger: CGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTC...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp AGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCCCCTGGCTGCCTCGGGATaGAGCGGGGCGGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: SRVGPNLASGERKATTVPLAASG*SGAASP
Trigger: TGGTGAGGCCGCCCCGCTCCATCCCGAGGCAGCCAG...GGGGACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp AAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCACCCCTGAAGAGAATCTaGAGGCTCCAGCTGCCCACA +
Preference number: 4 (lower is better)
Translates to: KRVGEAAGCCSPTPRWLAPLKRI*RLQLPT
Trigger: TGTGGGCAGCTGGAGCCTTCAGATTCTCTTCAGGGG...TGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS-3UTR TCA 90 bp AGGCCCCTCTCCACGGCCAGGAACAAGAAACTGAGTATCACCCAGTGCCCCACACCTGGGAGTAGCGCGTaGGGCGCTGGCTTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: RPLSTARNKKLSITQCPTPGSSA*GAGFFG
Trigger: CCCGAAGAAGCCAGCGCCTCACGCGCTACTCCCAGG...TGTGGGGCACTGGGTGATACTCAGTTTCTTGTTCCTGGCCGTGGAGAGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTTAAACAGGGTGCTCTaGCTCCCAGCCACCGAGCTC +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGLNRVL*LPATEL
Trigger: GAGCTCGGTGGCTGGGAGTCAGAGCACCCTGTTTAA...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTTTAAACAGGGTGCTCTaGCTCCCAGCCACCGAGCTC +
Preference number: 4 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPLNRVL*LPATEL
Trigger: GAGCTCGGTGGCTGGGAGTCAGAGCACCCTGTTTAA...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp TGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGACCAGTAGAGAAGTCTaGAGAGCCGGCCTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: CAPRSQSAEQACGGSGGVTSREV*RAGLAK
Trigger: CTTCGCCAGGCCGGCTCTTCAGACTTCTCTACTGGT...CACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGATCCAGGCCGGGAACTaGGATTCCACGTCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: RLEPPAAQETLPVLFICMIQAGN*DSTSSR
Trigger: GCGGGACGACGTGGAATCTCAGTTCCCGGCCTGGAT...CATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp TCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGATCCAGGCCGGGAACTaGGATTCCACGTCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: SLVLLEVRAPSKRVGEAAIQAGN*DSTSSR
Trigger: GCGGGACGACGTGGAATCTCAGTTCCCGGCCTGGAT...CGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCGGGCAAGGAACTGACTaGTCCAGGCCGGGAACTGAG +
Preference number: 4 (lower is better)
Translates to: PANRLEPPAAQETLPVLFGQGTD*SRPGTE
Trigger: CTCAGTTCCCGGCCTGGATCAGTCAGTTCCTTGCCC...GAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp GCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCCTCGGGCAAGGAACTaGCTGATCCAGGCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: AAQETLPVLFICMGPQAPPRARN*LIQAGN
Trigger: GTTCCCGGCCTGGATCAGTCAGTTCCTTGCCCGAGG...AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGATGCCGAAGAGGCTaGGGAGGGCCGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RLEPPAAQETLPVLFICMGCRRG*GGPSWS
Trigger: AGACCAAGACGGCCCTCCTCAGCCTCTTCGGCATCC...CATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp TGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCGATAGTGCTGTTGGGTaGCAAGGCCTTGGGCACATG +
Preference number: 4 (lower is better)
Translates to: WSLLTASSHLLLRRPCPSDSAVG*QGLGHM
Trigger: CATGTGCCCAAGGCCTTGTCACCCAACAGCACTATC...GGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp TGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGGCTCCCCATGCACTCTaGAGCGGTAGATGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: CAPRSQSAEQACGGSGGVAPHAL*SGRCRC
Trigger: ACACCTGCATCTACCGCTTCAGAGTGCATGGGGAGC...CACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCTGTGGACTCTTCCCCTaGAGAGAATCCTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: QACGGSGGVLFTHSQMAGCGLFP*RESWLG
Trigger: GCCAAGCCAGGATTCTCTTCAGGGGAAGAGTCCACA...GCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406622.5
CDS-3UTR GCA 90 bp TGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGCCTGCTGTCCTTCGCTaGCCACCAGGAAACCAAAGC +
Preference number: 4 (lower is better)
Translates to: CAPRSQSAEQACGGSGGVPAVLR*PPGNQS
Trigger: GCTTTGGTTTCCTGGTGGGCAGCGAAGGACAGCAGG...CACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGCCTCATCCGGCCTCCTaGTGTCCTTCGCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGPHPAS*CPSLPT
Trigger: GGTGGGCAGCGAAGGACAGCAGGAGGCCGGATGAGG...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CCTGACCCCAGCCAAGACCAGTCAGGTCCTACCTCTCCCAACTTCCCAGTCCCCCGAGCTCTGCTTCAGTaGCAGAGCCGCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PDPSQDQSGPTSPNFPVPRALLQ*QSRQLL
Trigger: CAGGAGCTGGCGGCTCTGGCACTGAAGCAGAGCTCG...GGGGACTGGGAAGTTGGGAGAGGTAGGACCTGACTGGTCTTGGCTGGGGTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCCCCGCACGGCCTGGATCTaGTGGGGCAGCAGGCCCACT +
Preference number: 4 (lower is better)
Translates to: SRVGPNLASGERKATTVPRTAWI*WGSRPT
Trigger: AGTGGGCCTGCTGCCCCAGCAGATCCAGGCCGTGCG...GGGGACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp GGAAGAAGGGAGCTGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGCTGGCCGACTTGCCCTaGATCTCTGCCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: GRRELLEPANRLEPPAAQLADLP*ISATWV
Trigger: CACCCATGTGGCAGAGATGCAGGGCAAGTCGGCCAG...CTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGCTTCCCTGGCCGACTTaGCCTGCATCTCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: CAPRSQSAEQACGGSGGVLPWPT*PASLPH
Trigger: ATGTGGCAGAGATGCAGGGCAAGTCGGCCAGGGAAG...CACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTCTCCAGGGCGTAGTCTaGCAGCCCGATGCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSLQGVV*QPDAVL
Trigger: GAGGACCGCATCGGGCTGGCAGACTACGCCCTGGAG...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGGCTCCTCGAACGCAAGGCCTTGGGCACATaGTCTAAGGTAACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AMVECPRPGMCWRRLLERKALGT*SKVTAV
Trigger: CACAGCCGTTACCTTAGAGCATGTGCCCAAGGCCTT...GCGTTCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR GCA 90 bp AGCTGCAAGAGCCCAAGGGGGCAGCCTGAGCGGACGACCCCTACATCAGGGCCTCCAGCCCCCACCAACTaGCCCACAGAGAACAAACCA +
Preference number: 4 (lower is better)
Translates to: SCKSPRGQPERTTPTSGPPAPTN*PTENKP
Trigger: TGGTTTGTTCTCTGTGGGGCAGTTGGTGGGGGCTGG...AGGCCCTGATGTAGGGGTCGTCCGCTCAGGCTGCCCCCTTGGGCTCTTGCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp AGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCCTGCCCGCCTTCTTaGCCCTTCCCCGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RRPCPSFSSAWGHRLLSCACPPS*PFPAAR
Trigger: TCTGGCTGCGGGGAAGGGGCAAGAAGGCGGGCAGGC...ACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp GGGAAGGAAGAAGGGAGCTGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGTTTGAGGCTCAGTGCTaGAGTGAAGGCCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GKEEGSCWSLLTASSHLLFEAQC*SEGLPA
Trigger: GGCGGGCAGGCCTTCACTGCAGCACTGAGCCTCAAA...CAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TGCCTGAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCCTGGATGGGGAGTCTaGGCCACTTCTGCTAGCACA +
Preference number: 4 (lower is better)
Translates to: CLRLQLAMVECPRPGMCWPGWGV*ATSAST
Trigger: TGTGCTAGCAGAAGTGGCGCAGACTCCCCATCCAGG...CCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR GCA 90 bp GGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGGCTCCTCGAACGCCTCTCCTGACGTCTGCAGGATaGGTGTTACACCCCATTTGG +
Preference number: 4 (lower is better)
Translates to: GRMPAPWHVLAAAPRTPLLTSAG*VLHPIW
Trigger: CCAAATGGGGTGTAACACGCATCCTGCAGACGTCAG...GAGAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR GCA 90 bp AAGCCGCATGCACTGCCTGAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGCCCCCCTGTGCTGACGTCTaGAGGATGCGTGTTACACCC +
Preference number: 4 (lower is better)
Translates to: KPHALPEAPAGHGRMPAPPCADV*RMRVTP
Trigger: GGGTGTAACACGCATCCTGCAGACGTCAGCACAGGG...GGGCGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAGGCAGTGCATGCGGCTT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR GCA 90 bp CAGCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGGCTCCTCAAGCTTCCCTCATGCTaGCCTTCTGGAAGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: QLAMVECPRPGMCWRRLLKLPSC*PSGRCL
Trigger: AAGGCACCTTCCAGAAGGGCAGCATGAGGGAAGCTT...GAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR GCA 90 bp CTGAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGAGGAAGCTTCCCTCATaGTGCCCTTCTGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: LRLQLAMVECPRPGMCWRRKLPS*CPSGRC
Trigger: GCACCTTCCAGAAGGGCAGCATGAGGGAAGCTTCCT...CCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CCA 90 bp AAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCAGGTCCTCACCCCAGTTaGCGTCACCATGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: KRVGEAAGCCSPTPRWLAGPHPS*RHHAVP
Trigger: AGGAACTGCATGGTGACGCCAACTGGGGTGAGGACC...TGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTGGTCCTCACCCCAGTTaGCGTCACCATGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPGPHPS*RHHAVP
Trigger: AGGAACTGCATGGTGACGCCAACTGGGGTGAGGACC...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCTCTGAAGAGCCGGCCTaGCGAAGTGGCCACCATCCA +
Preference number: 4 (lower is better)
Translates to: PANRLEPPAAQETLPVLFSEEPA*RSGHHP
Trigger: TGGATGGTGGCCACTTCGCCAGGCCGGCTCTTCAGA...GAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp GGGAAGGAAGAAGGGAGCTGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGGACGTTCCAGCCGCATaGCCTCCTTCTGCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: GKEEGSCWSLLTASSHLLDVPAA*PPSASW
Trigger: CCAACTGGCAGAAGGAGGCCATGCGGCTGGAACGTC...CAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCCTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp AGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCCCATCCTGCTCGCCAGGGTGTCCTCGTaGCTCAGGCCACCACCACCT +
Preference number: 4 (lower is better)
Translates to: SWAALHQVLPAWGSPILLARVSS*LRPPPP
Trigger: AGGTGGTGGTGGCCTGAGCCACGAGGACACCCTGGC...GAGCAGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGCCAGGGTGTCCTCGTaGCTCAGGCCACCACCACCT +
Preference number: 4 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGARVSS*LRPPPP
Trigger: AGGTGGTGGTGGCCTGAGCCACGAGGACACCCTGGC...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTGCCAGGGTGTCCTCGTaGCTCAGGCCACCACCACCT +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSARVSS*LRPPPP
Trigger: AGGTGGTGGTGGCCTGAGCCACGAGGACACCCTGGC...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CCTTGTAGGAGAGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCTCGTCCCGCACGGCCTaGATCTGCTGGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PCRRAGQLSIKCFLPGEVSSRTA*ICWGSR
Trigger: CCTGCTGCCCCAGCAGATCCAGGCCGTGCGGGACGA...GACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCTCTCCTACAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CAGACCTCGCACCCCGATACCCTGAACGTCCCCACAAGAGCCCAGGAGTTCCATAGGCCGCGGCTTCCCTaGCCGACTTGCCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: QTSHPDTLNVPTRAQEFHRPRLP*PTCPAS
Trigger: AGATGCAGGGCAAGTCGGCCAGGGAAGCCGCGGCCT...ATGGAACTCCTGGGCTCTTGTGGGGACGTTCAGGGTATCGGGGTGCGAGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp AGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTCACCACGCCTGCTTCACGATGTaGTGCACCTGCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RAQNKPWLPRDGAGRPHHACFTM*CTCSSV
Trigger: GACAGAGGAGCAGGTGCACCACATCGTGAAGCAGGC...GTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGCAGGTGTACTCGGGGTaGCCCCAGTTAGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGQVYSG*PQLVRI
Trigger: GATCCTGACTAACTGGGGCCACCCCGAGTACACCTG...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGCACAAGAAGCCCCATaGCCCACTGCTACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RLEPPAAQETLPVLFICMAQEAP*PTATLP
Trigger: GGGGAGGGTAGCAGTGGGCCATGGGGCTTCTTGTGC...CATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGCACAAGAAGCCCCATaGCCCACTGCTACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LSCAPRSQSAEQACGGSGAQEAP*PTATLP
Trigger: GGGGAGGGTAGCAGTGGGCCATGGGGCTTCTTGTGC...GCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp GCTACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGCCTGGGAGTAGCGCGTaGGGCGCTGGCTTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: ATYIHTPRMGSRRHGHRGPGSSA*GAGFFG
Trigger: CCCGAAGAAGCCAGCGCCTCACGCGCTACTCCCAGG...CCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp TGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCTTCTGAGTCTTGCTaGTGCTCTGCTCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CWSLLTASSHLLLRRPCPSSESC*CSALRA
Trigger: TGCCCTGAGAGCAGAGCATCAGCAAGACTCAGAAGA...CGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp AGCTGCAAGAGCCCAAGGGGGCAGCCTGAGCGGACGACCCCTACATCAGGGCCTTCTCTGCCACATGGGTaGGGATCTTGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SCKSPRGQPERTTPTSGPSLPHG*GSCSPA
Trigger: AGCTGGAGAGCAAGATCCTCACCCATGTGGCAGAGA...AGGCCCTGATGTAGGGGTCGTCCGCTCAGGCTGCCCCCTTGGGCTCTTGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTTCTCTGCCACATGGGTaGGGATCTTGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPSLPHG*GSCSPA
Trigger: AGCTGGAGAGCAAGATCCTCACCCATGTGGCAGAGA...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp GAAGGTGCCTTCCCCTGTGCTGACGTCTGCAGGATGCGTGTTACACCCCATTTGGACGCTGGCCCCTCCTaGCTCCAGGGCGTAGTCTGC +
Preference number: 4 (lower is better)
Translates to: EGAFPCADVCRMRVTPHLDAGPS*LQGVVC
Trigger: GCAGACTACGCCCTGGAGTCAGGAGGGGCCAGCGTC...CAAATGGGGTGTAACACGCATCCTGCAGACGTCAGCACAGGGGAAGGCACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR TCA 90 bp CTCCCGGCCTTCCTTTCCTGGCCACCCAACCCCTCTTGTGTAAAGCCCACCTCCGAGGATGACTCGGGGTaGCTGGGAGTGGTACCACAG +
Preference number: 4 (lower is better)
Translates to: LPAFLSWPPNPSCVKPTSEDDSG*LGVVPQ
Trigger: CTGTGGTACCACTCCCAGTCACCCCGAGTCATCCTC...GGAGGTGGGCTTTACACAAGAGGGGTTGGGTGGCCAGGAAAGGAAGGCCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR TCA 90 bp CGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGCATCTGGCTGGAGGATaGCTCGGGGTGACTGGGAGT +
Preference number: 4 (lower is better)
Translates to: RLEPPAAQETLPVLFICMHLAGG*LGVTGS
Trigger: ACTCCCAGTCACCCCGAGTCATCCTCCAGCCAGATG...CATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp ACGCCTCTCCCGGCCTTCCTTTCCTGGCCACCCAACCCCTCTTGTGTAAAGCCCCATCTGGCTGGAGGATaGCTCGGGGTGACTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TPLPAFLSWPPNPSCVKPHLAGG*LGVTGS
Trigger: ACTCCCAGTCACCCCGAGTCATCCTCCAGCCAGATG...GGGCTTTACACAAGAGGGGTTGGGTGGCCAGGAAAGGAAGGCCGGGAGAGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR TCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGGATAGTGCTGTTGGGTaGCAAGGCCTTGGGCACATG +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGDSAVG*QGLGHM
Trigger: CATGTGCCCAAGGCCTTGTCACCCAACAGCACTATC...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTCTCCGCTGCTGCTGCTaGCGTCATCGTCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: RRPCPSFSSAWGHRLLSCLRCCC*RHRHPG
Trigger: CCCAGGGTGACGATGACGGCAGCAGCAGCAGCGGAG...ACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGTCCCTCCGCTGCTGCTaGTGCCGTCATCGTCACCCT +
Preference number: 4 (lower is better)
Translates to: HGATGSSLVLLEVRAPSKSLRCC*CRHRHP
Trigger: AGGGTGACGATGACGGCAGCAGCAGCAGCGGAGGGA...CTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTCCGAGCTCCCTCCGCTaGTGCTGCTGCCGTCATCGT +
Preference number: 4 (lower is better)
Translates to: RRPCPSFSSAWGHRLLSCPSSLR*CCCRHR
Trigger: ACGATGACGGCAGCAGCAGCAGCGGAGGGAGCTCGG...ACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCGTAGTAGGAGGTGTGTaGATCAGAGGACGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PANRLEPPAAQETLPVLFVVGGV*IRGRAQ
Trigger: CTGGGCCCGTCCTCTGATGCACACACCTCCTACTAC...GAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTCGGGACATAACACGCTaGTCAGCCTGGAAATGTGGC +
Preference number: 4 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPRDITR*SAWKCG
Trigger: GCCACATTTCCAGGCTGAGCAGCGTGTTATGTCCCG...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTCGAGCTCTGCTTCAGTaGCAGAGCCGCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSRALLQ*QSRQLL
Trigger: CAGGAGCTGGCGGCTCTGGCACTGAAGCAGAGCTCG...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp ATGGCCCACTGCTACCCTCCCCGGGACAAATACACACTTTTGTCGAAGGCCCTCCGCACGGCCTGGATCTaGTGGGGCAGCAGGCCCACT +
Preference number: 4 (lower is better)
Translates to: MAHCYPPRDKYTLLSKALRTAWI*WGSRPT
Trigger: AGTGGGCCTGCTGCCCCAGCAGATCCAGGCCGTGCG...GAGGGCCTTCGACAAAAGTGTGTATTTGTCCCGGGGAGGGTAGCAGTGGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp GCTACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGCGCACGGCCTGGATCTaGTGGGGCAGCAGGCCCACT +
Preference number: 4 (lower is better)
Translates to: ATYIHTPRMGSRRHGHRGRTAWI*WGSRPT
Trigger: AGTGGGCCTGCTGCCCCAGCAGATCCAGGCCGTGCG...CCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGATCACACCTTCTTTCTaGAGCGTCAGGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: CWSLLTASSHLLLRRPCPITPSF*SVRLRE
Trigger: CTCCCTGAGCCTGACGCTGCAGAAAGAAGGTGTGAT...CGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp ACGCCTCTCCCGGCCTTCCTTTCCTGGCCACCCAACCCCTCTTGTGTAAAGCCCAGTCTGCCAGCCCGATaGGGTCCTCACTGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: TPLPAFLSWPPNPSCVKPSLPAR*GPHCSA
Trigger: AGCGCTACAGTGAGGACCGCATCGGGCTGGCAGACT...GGGCTTTACACAAGAGGGGTTGGGTGGCCAGGAAAGGAAGGCCGGGAGAGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR GCA 90 bp AGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTCACCACAGTGTCCCCTCCTGCTaGAGGTCTTCGTCAAACCCA +
Preference number: 4 (lower is better)
Translates to: RAQNKPWLPRDGAGRPHHSVPSC*RSSSNP
Trigger: TGGGTTTGACGAAGACCTGCAGCAGGAGGGGACACT...GTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGAGTGTCCCCTCCTGCTaGAGGTCTTCGTCAAACCCA +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGSVPSC*RSSSNP
Trigger: TGGGTTTGACGAAGACCTGCAGCAGGAGGGGACACT...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp ATGGCCCACTGCTACCCTCCCCGGGACAAATACACACTTTTGTCGAAGGCCCTCCCGCCTCGAGCCACCTaGTGCTCAGGAGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: MAHCYPPRDKYTLLSKALPPRAT*CSGDPA
Trigger: GGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGG...GAGGGCCTTCGACAAAAGTGTGTATTTGTCCCGGGGAGGGTAGCAGTGGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGGCCCAGGCCGTAGCTTaGCCCTCCCACAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: FHLHGATGSSLVLLEVRAAQAVA*PSHSPG
Trigger: GCCAGGGCTGTGGGAGGGGCAAGCTACGGCCTGGGC...CGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TCACAGCAGCCAGTCCCCTTTAGGGCACAAGAAGCCCCATGGCCCACTGCTACCAGCCCCATGGCCCACTaGTACCCTCCCCGGGACAAA +
Preference number: 4 (lower is better)
Translates to: SQQPVPFRAQEAPWPTATSPMAH*YPPRDK
Trigger: TTTGTCCCGGGGAGGGTAGCAGTGGGCCATGGGGCT...GGTAGCAGTGGGCCATGGGGCTTCTTGTGCCCTAAAGGGGACTGGCTGCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CCTGACCCCAGCCAAGACCAGTCAGGTCCTACCTCTCCCAACTTCCCAGTCCCCCACATCCGAGTAGCCTaGGGGGAACGAGGACACTGG +
Preference number: 4 (lower is better)
Translates to: PDPSQDQSGPTSPNFPVPHIRVA*GERGHW
Trigger: CCAGTGTCCTCGTTCCCCGCAGGCTACTCGGATGTG...GGGGACTGGGAAGTTGGGAGAGGTAGGACCTGACTGGTCTTGGCTGGGGTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000405018.5
CDS-3UTR GCA 90 bp TTAAGCCGCATGCACTGCCTGAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGCTTAAGCCGCATGCACTaGCTGAGGCTCCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LSRMHCLRLQLAMVECPRLSRMH*LRLQLA
Trigger: GGCCAGCTGGAGCCTCAGGCAGTGCATGCGGCTTAA...GCGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAGGCAGTGCATGCGGCTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CCA 90 bp CCTGACCCCAGCCAAGACCAGTCAGGTCCTACCTCTCCCAACTTCCCAGTCCCCGACGTTCCAGCCGCATaGCCTCCTTCTGCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: PDPSQDQSGPTSPNFPVPDVPAA*PPSASW
Trigger: CCAACTGGCAGAAGGAGGCCATGCGGCTGGAACGTC...GGGGACTGGGAAGTTGGGAGAGGTAGGACCTGACTGGTCTTGGCTGGGGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCTCCTGGAAGGACTCCTaGGTCATGCTTTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: QACGGSGGVLFTHSQMAGSWKDS*VMLCHS
Trigger: AGAGTGGCAAAGCATGACCCAGGAGTCCTTCCAGGA...GCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAATGCAGGCCGGCCAGCTaGTCCTCCAGCCGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKECRPAS*SSSRLS
Trigger: GCTGAGGCGGCTGGAGGACCAGCTGGCCGGCCTGCA...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTTGCAGGCCGGCCAGCTaGTCCTCCAGCCGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PSFSSAWGHRLLSCAPRSCRPAS*SSSRLS
Trigger: GCTGAGGCGGCTGGAGGACCAGCTGGCCGGCCTGCA...ACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGTGCACATCTGGCTaGAGGATGACTCGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LSCAPRSQSAEQACGGSGGCTSG*RMTRGD
Trigger: GTCACCCCGAGTCATCCTCCAGCCAGATGTGCACCC...GCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TCACAGCAGCCAGTCCCCTTTAGGGCACAAGAAGCCCCATGGCCCACTGCTACCGCCTGGGTGCACATCTaGCTGGAGGATGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: SQQPVPFRAQEAPWPTATAWVHI*LEDDSG
Trigger: CCCCGAGTCATCCTCCAGCCAGATGTGCACCCAGGC...GGTAGCAGTGGGCCATGGGGCTTCTTGTGCCCTAAAGGGGACTGGCTGCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCAAGCCTTGTGGCCCCTaGAAGGCCCAGCAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: LSCAPRSQSAEQACGGSGKPCGP*KAQQLP
Trigger: AGGCAACTGCTGGGCCTTCCAGGGGCCACAAGGCTT...GCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp AGCTGCAAGAGCCCAAGGGGGCAGCCTGAGCGGACGACCCCTACATCAGGGCCTCGTCAAACCCAAAGATaGCGAAGTCCTTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SCKSPRGQPERTTPTSGPRQTQR*RSPWGH
Trigger: GTGCCCCCAAGGACTTCGCCATCTTTGGGTTTGACG...AGGCCCTGATGTAGGGGTCGTCCGCTCAGGCTGCCCCCTTGGGCTCTTGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp GCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTTACACACTCCCAGGATaGGAAGCAGACGCCACGGGC +
Preference number: 4 (lower is better)
Translates to: AAQETLPVLFICMGPQAPYTLPG*EADATG
Trigger: GCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTA...AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CCTGACCCCAGCCAAGACCAGTCAGGTCCTACCTCTCCCAACTTCCCAGTCCCCTACACACTCCCAGGATaGGAAGCAGACGCCACGGGC +
Preference number: 4 (lower is better)
Translates to: PDPSQDQSGPTSPNFPVPYTLPG*EADATG
Trigger: GCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTA...GGGGACTGGGAAGTTGGGAGAGGTAGGACCTGACTGGTCTTGGCTGGGGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CCTGACCCCAGCCAAGACCAGTCAGGTCCTACCTCTCCCAACTTCCCAGTCCCCCAAGCTCAGGGGCACTaGCAGGCCCTAGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: PDPSQDQSGPTSPNFPVPQAQGH*QALAGT
Trigger: TGTTCCTGCTAGGGCCTGCCAGTGCCCCTGAGCTTG...GGGGACTGGGAAGTTGGGAGAGGTAGGACCTGACTGGTCTTGGCTGGGGTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGCGCAAAACAAACCCTaGCTGCCTCGGGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: RLEPPAAQETLPVLFICMAQNKP*LPRDGA
Trigger: CGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGC...CATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CCTGGCATGTGCTGGCGGCGGCTCCTCGAACGCCTCTCCCGGCCTTCCTTTCCTGTAAAGCCCACCTCCTaGTGTCCTTTTCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGMCWRRLLERLSRPSFPVKPTS*CPFPGS
Trigger: GCTTCCTGGAAAAGGACACCAGGAGGTGGGCTTTAC...AGGAAAGGAAGGCCGGGAGAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR TCA 90 bp AGCTGCAAGAGCCCAAGGGGGCAGCCTGAGCGGACGACCCCTACATCAGGGCCTTGTGGACTCTTCCCCTaGAGAGAATCTGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SCKSPRGQPERTTPTSGPCGLFP*RESEGS
Trigger: GGAGCCTTCAGATTCTCTTCAGGGGAAGAGTCCACA...AGGCCCTGATGTAGGGGTCGTCCGCTCAGGCTGCCCCCTTGGGCTCTTGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS-3UTR TCA 90 bp GCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTGGAAATGTGGCGATaGGTCTCTGGCTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AAQETLPVLFICMGPQAPLEMWR*VSGFPA
Trigger: GGCTGGGAAGCCAGAGACTCATCGCCACATTTCCAG...AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp AGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCCCATCCAGGCCGGGAACTaGGATTCCACGTCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: SRVGPNLASGERKATTVPIQAGN*DSTSSR
Trigger: GCGGGACGACGTGGAATCTCAGTTCCCGGCCTGGAT...GGGGACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp AGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCCCATCCTGCTCGGGCAAGGAACTGACTaGTCCAGGCCGGGAACTGAG +
Preference number: 4 (lower is better)
Translates to: SWAALHQVLPAWGSPILLGQGTD*SRPGTE
Trigger: CTCAGTTCCCGGCCTGGATCAGTCAGTTCCTTGCCC...GAGCAGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp GCCCTTCTGGAAGGTGCCTTCCCCTGTGCTGACGTCTGCAGGATGCGTGTTACAGGATGCCGAAGAGGCTaGGGAGGGCCGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: ALLEGAFPCADVCRMRVTGCRRG*GGPSWS
Trigger: AGACCAAGACGGCCCTCCTCAGCCTCTTCGGCATCC...TGTAACACGCATCCTGCAGACGTCAGCACAGGGGAAGGCACCTTCCAGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR TCA 90 bp TGCCTGAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGTCCTGATCGTAAGTaGACTTGCCAAGGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: CLRLQLAMVECPRPGMCWRPDRK*TCQGVS
Trigger: GGACACTCCTTGGCAAGTTCACTTACGATCAGGACG...CCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR TCA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTCCAGGAACAAGAAACTaGGTATCACCCAGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPPGTRN*VSPSAP
Trigger: TGGGGCACTGGGTGATACTCAGTTTCTTGTTCCTGG...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp GCTCCAGCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGGCTTTGGATATCACATCTTaGGCTGTGGGAAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: APAGHGRMPAPWHVLAAALDITS*AVGKES
Trigger: GCTCTCCTTTCCCACAGCTCAAGATGTGATATCCAA...AGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGCTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR GCA 90 bp CCTTGTAGGAGAGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCTCCCTCCGCTGCTGCTaGTGCCGTCATCGTCACCCT +
Preference number: 4 (lower is better)
Translates to: PCRRAGQLSIKCFLPGEVSLRCC*CRHRHP
Trigger: AGGGTGACGATGACGGCAGCAGCAGCAGCGGAGGGA...GACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCTCTCCTACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp AGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCCCAGCTCCCTCCGCTGCTaGTGCTGCCGTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: SRVGPNLASGERKATTVPSSLRC*CCRHRH
Trigger: GTGACGATGACGGCAGCAGCAGCAGCGGAGGGAGCT...GGGGACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp GCTACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGCCGAGCTCCCTCCGCTaGTGCTGCTGCCGTCATCGT +
Preference number: 4 (lower is better)
Translates to: ATYIHTPRMGSRRHGHRGPSSLR*CCCRHR
Trigger: ACGATGACGGCAGCAGCAGCAGCGGAGGGAGCTCGG...CCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGGCCCGCTGGCCCTGCTaGTCTCTGAGCCACCCGTGC +
Preference number: 4 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGARWPC*SLSHPC
Trigger: GCACGGGTGGCTCAGAGAGCAGCAGGGCCAGCGGGC...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAACAAGCCCGCTGGCCCTaGTGCTCTCTGAGCCACCCG +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKEQARWP*CSLSHP
Trigger: CGGGTGGCTCAGAGAGCAGCAGGGCCAGCGGGCTTG...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTCCTGGGTCATGCTTTaGCACTCTGACTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGSWVML*HSDFSC
Trigger: GCAGCTGAAGTCAGAGTGGCAAAGCATGACCCAGGA...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGAGAGCCGCCAGCTCCTaGTGCAGGCCGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGRAASS*CRPASW
Trigger: CCAGCTGGCCGGCCTGCAGCAGGAGCTGGCGGCTCT...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCTGGCCGACTTGCCCTaGATCTCTGCCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: HGATGSSLVLLEVRAPSKLADLP*ISATWV
Trigger: CACCCATGTGGCAGAGATGCAGGGCAAGTCGGCCAG...CTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGCTTCCCTGGCCGACTTaGCCTGCATCTCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: RLEPPAAQETLPVLFICMLPWPT*PASLPH
Trigger: ATGTGGCAGAGATGCAGGGCAAGTCGGCCAGGGAAG...CATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTATCACACCTTCTTTCTaGAGCGTCAGGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: DRRAQNKPWLPRDGAGRPITPSF*SVRLRE
Trigger: CTCCCTGAGCCTGACGCTGCAGAAAGAAGGTGTGAT...AGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp AAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCATGCTTCACGATGTGGTaGACCTGCTCCTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: KRVGEAAGCCSPTPRWLACFTMW*TCSSVT
Trigger: AGTGACAGAGGAGCAGGTGCACCACATCGTGAAGCA...TGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AGCTGCAAGAGCCCAAGGGGGCAGCCTGAGCGGACGACCCCTACATCAGGGCCTAAGGCCTTGGGCACATaGTCTAAGGTAACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SCKSPRGQPERTTPTSGPKALGT*SKVTAV
Trigger: CACAGCCGTTACCTTAGAGCATGTGCCCAAGGCCTT...AGGCCCTGATGTAGGGGTCGTCCGCTCAGGCTGCCCCCTTGGGCTCTTGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp ATGGCCCACTGCTACCCTCCCCGGGACAAATACACACTTTTGTCGAAGGCCCTCGGGGAAGCGGCGGGGTaGTGTTCACCCACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: MAHCYPPRDKYTLLSKALGEAAG*CSPTPR
Trigger: TCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCC...GAGGGCCTTCGACAAAAGTGTGTATTTGTCCCGGGGAGGGTAGCAGTGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGCCCGTCCTTTTCATCTaGATGGGGCCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RLEPPAAQETLPVLFICMPVLFI*MGPQAP
Trigger: AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGG...CATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTAAGGAAGAAGGGAGCTaGTGGAGCCTGCTAACCGCC +
Preference number: 4 (lower is better)
Translates to: AAQETLPVLFICMGPQAPKEEGS*WSLLTA
Trigger: GGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCCTT...AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGAAGTCCCATCCTaGTCTGGAGCTAAGCACCCT +
Preference number: 4 (lower is better)
Translates to: LSCAPRSQSAEQACGGSGGEVPS*SGAKHP
Trigger: AGGGTGCTTAGCTCCAGAGCAGGATGGGACTTCCCC...GCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp GGAAGAAGGGAGCTGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGCCATCAAGTGCTTCCTaGCTGGGGAAGTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: GRRELLEPANRLEPPAAQPSSAS*LGKSHP
Trigger: AGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGG...CTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp GCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTGGACCCTGTGGTTCATaGTTCCCTAGGTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: AAQETLPVLFICMGPQAPGPCGS*FPRWRA
Trigger: TGCCCTCCACCTAGGGAAGCATGAACCACAGGGTCC...AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGAGCCCAGGAGTTCCATaGTCCCCACTCTTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGSPGVP*SPLFLL
Trigger: TAGCAAGAAGAGTGGGGAGCATGGAACTCCTGGGCT...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp GGGAAGGAAGAAGGGAGCTGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGTACCTGAACAAGAGCTaGAAGAGCCCAAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GKEEGSCWSLLTASSHLLYLNKS*KSPRGQ
Trigger: CTGCCCCCTTGGGCTCTTGCAGCTCTTGTTCAGGTA...CAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp GCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTATCCAGGGTAACTTCTaGCAGCCTCTTCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AAQETLPVLFICMGPQAPIQGNF*QPLPPA
Trigger: GGCTGGGGGAAGAGGCTGGCAGAAGTTACCCTGGAT...AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTTTGAGGCTCAGTGCTaGAGTGAAGGCCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSFEAQC*SEGLPA
Trigger: GGCGGGCAGGCCTTCACTGCAGCACTGAGCCTCAAA...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGGGAACTGCCTGTCCCTaGAAACGGCCTGTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: HGATGSSLVLLEVRAPSKGTACP*KRPVWH
Trigger: GTGCCAGACAGGCCGTTTCCAGGGACAGGCAGTTCC...CTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS-3UTR CCA 90 bp TGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCGGCGCTTCATGTTGCTaGATTTCCTCTTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: WSLLTASSHLLLRRPCPSGASCC*ISSSRS
Trigger: GGACCTTGAAGAGGAAATCCAGCAACATGAAGCGCC...GGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp AGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTCCTCCAGGGAGCTCCTaGGTGGGAACCAGGACTCGT +
Preference number: 4 (lower is better)
Translates to: RRPCPSFSSAWGHRLLSCPPGSS*VGTRTR
Trigger: ACGAGTCCTGGTTCCCACCCAGGAGCTCCCTGGAGG...ACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGTCCTCACCCCAGTTaGCGTCACCATGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RLEPPAAQETLPVLFICMGPHPS*RHHAVP
Trigger: AGGAACTGCATGGTGACGCCAACTGGGGTGAGGACC...CATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAAGCCCCACAAGCCCGCTaGCCCTGCTGCTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKEAPQAR*PCCSLS
Trigger: GCTCAGAGAGCAGCAGGGCCAGCGGGCTTGTGGGGC...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp ATGGCCCACTGCTACCCTCCCCGGGACAAATACACACTTTTGTCGAAGGCCCTCCCAGGAAGTCCTCGGTaGCCTTGCGCCCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: MAHCYPPRDKYTLLSKALPGSPR*PCAPQA
Trigger: GGCTTGTGGGGCGCAAGGCCACCGAGGACTTCCTGG...GAGGGCCTTCGACAAAAGTGTGTATTTGTCCCGGGGAGGGTAGCAGTGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp GCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTTTCGGAGCCGCGAGCTaGAACTCTGCTGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: AAQETLPVLFICMGPQAPFGAAS*NSAGPH
Trigger: ATGTGGACCAGCAGAGTTCCAGCTCGCGGCTCCGAA...AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CCTTGTAGGAGAGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCGCCGGCCTGGCGAAGTaGCCACCATCCAGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: PCRRAGQLSIKCFLPGEVAGLAK*PPSRVR
Trigger: CCTTACTCTGGATGGTGGCCACTTCGCCAGGCCGGC...GACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCTCTCCTACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTCTGAAGAGCCGGCCTaGCGAAGTGGCCACCATCCA +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSSEEPA*RSGHHP
Trigger: TGGATGGTGGCCACTTCGCCAGGCCGGCTCTTCAGA...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TCACAGCAGCCAGTCCCCTTTAGGGCACAAGAAGCCCCATGGCCCACTGCTACCTCAGGCGGTACCAGGTaGTGCCAGCCCACCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SQQPVPFRAQEAPWPTATSGGTR*CQPTSR
Trigger: TCTACTGGTGGGCTGGCACCACCTGGTACCGCCTGA...GGTAGCAGTGGGCCATGGGGCTTCTTGTGCCCTAAAGGGGACTGGCTGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTGTGGCGATGAGTCTCTaGCTTCCCAGCCCTCATCCG +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSVAMSL*LPSPHP
Trigger: CGGATGAGGGCTGGGAAGCCAGAGACTCATCGCCAC...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGGGGTGCACATCTGGCTaGAGGATGACTCGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: HGATGSSLVLLEVRAPSKGCTSG*RMTRGD
Trigger: GTCACCCCGAGTCATCCTCCAGCCAGATGTGCACCC...CTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TTTAAGCCGCATGCACTGCCTGAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGGGGTGCACATCTGGCTaGAGGATGACTCGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: FKPHALPEAPAGHGRMPAGCTSG*RMTRGD
Trigger: GTCACCCCGAGTCATCCTCCAGCCAGATGTGCACCC...CGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAGGCAGTGCATGCGGCTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CCA 90 bp TTCCTTTCCTGGCCACCCAACCCCTCTTGTGTAAAGCCCACCTCCTGGTGTCCTCACGGCGAAGCCTTGTaGCCCCTGGAAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FLSWPPNPSCVKPTSWCPHGEAL*PLEGPA
Trigger: TGCTGGGCCTTCCAGGGGCCACAAGGCTTCGCCGTG...AGGACACCAGGAGGTGGGCTTTACACAAGAGGGGTTGGGTGGCCAGGAAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CCA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGTCACCCACTCCCAGATaGCTGGCAGCAGGCACCAGT +
Preference number: 4 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGSPTPR*LAAGTS
Trigger: ACTGGTGCCTGCTGCCAGCCATCTGGGAGTGGGTGA...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTGAAGAAGGGAGCTGCTaGAGCCTGCTAACCGCCTCG +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSEEGSC*SLLTAS
Trigger: CGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTC...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CTCATGCTGCCCTTCTGGAAGGTGCCTTCCCCTGTGCTGACGTCTGCAGGATGCCACCTGCTGCCTGGATaGGGAGTCTGCGCCACTTCT +
Preference number: 4 (lower is better)
Translates to: LMLPFWKVPSPVLTSAGCHLLPG*GVCATS
Trigger: AGAAGTGGCGCAGACTCCCCATCCAGGCAGCAGGTG...GCATCCTGCAGACGTCAGCACAGGGGAAGGCACCTTCCAGAAGGGCAGCATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR TCA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGCTGGAAATGTGGCGATaGGTCTCTGGCTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGLEMWR*VSGFPA
Trigger: GGCTGGGAAGCCAGAGACTCATCGCCACATTTCCAG...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTCTGGAAATGTGGCGATaGGTCTCTGGCTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSLEMWR*VSGFPA
Trigger: GGCTGGGAAGCCAGAGACTCATCGCCACATTTCCAG...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGCCCGGACGATCTTCTTaGAGAGGTCTTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGPGRSS*RGLLSL
Trigger: AAGACTCAGAAGACCTCTTCAAGAAGATCGTCCGGG...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp TTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGTGCATCTCCTCTCTCTaGAGGAGCCCCACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: FHLHGATGSSLVLLEVRACISSL*RSPTRP
Trigger: GGGCCGCGTGGGGCTCCTTCAGAGAGAGGAGATGCA...CGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp ATGGCCCACTGCTACCCTCCCCGGGACAAATACACACTTTTGTCGAAGGCCCTCGGATGCCGAAGAGGCTaGGGAGGGCCGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: MAHCYPPRDKYTLLSKALGCRRG*GGPSWS
Trigger: AGACCAAGACGGCCCTCCTCAGCCTCTTCGGCATCC...GAGGGCCTTCGACAAAAGTGTGTATTTGTCCCGGGGAGGGTAGCAGTGGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTGCTCCCCATGCACTCTaGAGCGGTAGATGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSAPHAL*SGRCRC
Trigger: ACACCTGCATCTACCGCTTCAGAGTGCATGGGGAGC...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CCTGACCCCAGCCAAGACCAGTCAGGTCCTACCTCTCCCAACTTCCCAGTCCCCAGAAGGGCGACTACCTaGACAAGAGCTGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: PDPSQDQSGPTSPNFPVPRRATT*TRAARA
Trigger: GGCTCTTGCAGCTCTTGTTCAGGTAGTCGCCCTTCT...GGGGACTGGGAAGTTGGGAGAGGTAGGACCTGACTGGTCTTGGCTGGGGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp CTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCAGAAGGGCGACTACCTaGACAAGAGCTGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LLRRPCPSFSSAWGHRLLRRATT*TRAARA
Trigger: GGCTCTTGCAGCTCTTGTTCAGGTAGTCGCCCTTCT...GAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp AGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCCCATCCTGCTCTGTGGACTCTTCCCCTaGAGAGAATCTGCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: SWAALHQVLPAWGSPILLCGLFP*RESAAA
Trigger: CGCGGCAGCAGATTCTCTTCAGGGGAAGAGTCCACA...GAGCAGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405018.5
CDS-3UTR GCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAACCGAGCTCCCTCCGCTaGTGCTGCTGCCGTCATCGT +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKEPSSLR*CCCRHR
Trigger: ACGATGACGGCAGCAGCAGCAGCGGAGGGAGCTCGG...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGTAGTAGGAGGTGTGTaGATCAGAGGACGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGVVGGV*IRGRAQ
Trigger: CTGGGCCCGTCCTCTGATGCACACACCTCCTACTAC...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGAGTCCTCGGTGGCCTTaGGCCCCACAAGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGSPRWP*APQARW
Trigger: CCAGCGGGCTTGTGGGGCGCAAGGCCACCGAGGACT...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAAGTCCTCGGTGGCCTTaGGCCCCACAAGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: YIYTHSQDGKQTPRAQRESPRWP*APQARW
Trigger: CCAGCGGGCTTGTGGGGCGCAAGGCCACCGAGGACT...TTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCGGGACATAACACGCTaGTCAGCCTGGAAATGTGGC +
Preference number: 4 (lower is better)
Translates to: AAQETLPVLFICMGPQAPRDITR*SAWKCG
Trigger: GCCACATTTCCAGGCTGAGCAGCGTGTTATGTCCCG...AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGAGCAGCAGTTTCCCTaGGGAAATCCTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSCAPRSQSAEQACGGSGEQQFP*GNPPSG
Trigger: CCCTGAAGGAGGATTTCCGCAGGGAAACTGCTGCTC...GCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCGTCTTGCTGATGCTCTaGTCTCAGGGCAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: PANRLEPPAAQETLPVLFVLLML*SQGRQF
Trigger: GAACTGTCTGCCCTGAGAGCAGAGCATCAGCAAGAC...GAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGCACTCTGACTTCAGCTaGTGGATGCGAGCCTCGGAC +
Preference number: 4 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGHSDFS*WMRASD
Trigger: GTCCGAGGCTCGCATCCAGCAGCTGAAGTCAGAGTG...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGAGGACTCCTGGGTCATaGTTTGCCACTCTGACTTCA +
Preference number: 4 (lower is better)
Translates to: CAPRSQSAEQACGGSGGVRTPGS*FATLTS
Trigger: TGAAGTCAGAGTGGCAAAGCATGACCCAGGAGTCCT...CACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAATCCGCCACCGAGCTCTaGTTCAGTGCCAGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKESATEL*FSARAA
Trigger: GGCGGCTCTGGCACTGAAGCAGAGCTCGGTGGCGGA...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GGGAGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCTGGCCGACTTGCCCTaGATCTCTGCCACATGGGTG +
Preference number: 4 (lower is better)
Translates to: GSRVGPNLASGERKATTVLADLP*ISATWV
Trigger: CACCCATGTGGCAGAGATGCAGGGCAAGTCGGCCAG...GACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp AGGCCCCTCTCCACGGCCAGGAACAAGAAACTGAGTATCACCCAGTGCCCCACAGGAAGGCCCAGCAGTTaGCTGGGTGCACATCTGGCT +
Preference number: 4 (lower is better)
Translates to: RPLSTARNKKLSITQCPTGRPSS*LGAHLA
Trigger: AGCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCC...TGTGGGGCACTGGGTGATACTCAGTTTCTTGTTCCTGGCCGTGGAGAGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAAGGGGAAGCGGCGGGGTaGTGTTCACCCACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKEGEAAG*CSPTPR
Trigger: TCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCC...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGCTGCTCAGGAGACCCTaGCCGTCCTTTTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: SLVLLEVRAPSKRVGEAALLRRP*PSFSSA
Trigger: TGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAG...CGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCCATCAAGTGCTTCCTaGCTGGGGAAGTCCCATCCT +
Preference number: 4 (lower is better)
Translates to: AAQETLPVLFICMGPQAPPSSAS*LGKSHP
Trigger: AGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGG...AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTCCAGCCCCCACCAACTaGCCCACAGAGAACAAACCA +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSPAPTN*PTENKP
Trigger: TGGTTTGTTCTCTGTGGGGCAGTTGGTGGGGGCTGG...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTATCCAGGGTAACTTCTaGCAGCCTCTTCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSIQGNF*QPLPPA
Trigger: GGCTGGGGGAAGAGGCTGGCAGAAGTTACCCTGGAT...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp TGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGGGCGCTTCATGTTGCTaGATTTCCTCTTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: CAPRSQSAEQACGGSGGVGASCC*ISSSRS
Trigger: GGACCTTGAAGAGGAAATCCAGCAACATGAAGCGCC...CACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGTTCGGAGCCGCGAGCTaGAACTCTGCTGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: HGATGSSLVLLEVRAPSKFGAAS*NSAGPH
Trigger: ATGTGGACCAGCAGAGTTCCAGCTCGCGGCTCCGAA...CTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp AGCTGCAAGAGCCCAAGGGGGCAGCCTGAGCGGACGACCCCTACATCAGGGCCTGGGACGAGAAGCGCCTaGTTAAAACGAAGACGTCAA +
Preference number: 4 (lower is better)
Translates to: SCKSPRGQPERTTPTSGPGTRSA*LKRRRQ
Trigger: TTGACGTCTTCGTTTTAACCAGGCGCTTCTCGTCCC...AGGCCCTGATGTAGGGGTCGTCCGCTCAGGCTGCCCCCTTGGGCTCTTGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp AGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCCCGTGGCGATGAGTCTCTaGCTTCCCAGCCCTCATCCG +
Preference number: 4 (lower is better)
Translates to: SRVGPNLASGERKATTVPVAMSL*LPSPHP
Trigger: CGGATGAGGGCTGGGAAGCCAGAGACTCATCGCCAC...GGGGACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp ATGGCCCACTGCTACCCTCCCCGGGACAAATACACACTTTTGTCGAAGGCCCTCACGGCCTGGATCTGCTaGGGCAGCAGGCCCACTTCT +
Preference number: 4 (lower is better)
Translates to: MAHCYPPRDKYTLLSKALTAWIC*GSRPTS
Trigger: AGAAGTGGGCCTGCTGCCCCAGCAGATCCAGGCCGT...GAGGGCCTTCGACAAAAGTGTGTATTTGTCCCGGGGAGGGTAGCAGTGGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTAGGCCGCGGCTTCCCTaGCCGACTTGCCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: PSFSSAWGHRLLSCAPRSRPRLP*PTCPAS
Trigger: AGATGCAGGGCAAGTCGGCCAGGGAAGCCGCGGCCT...ACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TTCCTTTCCTGGCCACCCAACCCCTCTTGTGTAAAGCCCACCTCCTGGTGTCCTGGCCCAGCAGTTGCCTaGGTGCACATCTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FLSWPPNPSCVKPTSWCPGPAVA*VHIWLE
Trigger: CTCCAGCCAGATGTGCACCCAGGCAACTGCTGGGCC...AGGACACCAGGAGGTGGGCTTTACACAAGAGGGGTTGGGTGGCCAGGAAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CCA 90 bp AGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTAAGCCTTGTGGCCCCTaGAAGGCCCAGCAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: RRPCPSFSSAWGHRLLSCKPCGP*KAQQLP
Trigger: AGGCAACTGCTGGGCCTTCCAGGGGCCACAAGGCTT...ACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CAGACCTCGCACCCCGATACCCTGAACGTCCCCACAAGAGCCCAGGAGTTCCATCAGGTGTACTCGGGGTaGCCCCAGTTAGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: QTSHPDTLNVPTRAQEFHQVYSG*PQLVRI
Trigger: GATCCTGACTAACTGGGGCCACCCCGAGTACACCTG...ATGGAACTCCTGGGCTCTTGTGGGGACGTTCAGGGTATCGGGGTGCGAGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCTCCTTTTCATCTGCATaGGGCCACAGGCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PANRLEPPAAQETLPVLFSFSSA*GHRLLS
Trigger: AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGA...GAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp AGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTACCAGTAGAGAAGTCTaGAGAGCCGGCCTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RRPCPSFSSAWGHRLLSCTSREV*RAGLAK
Trigger: CTTCGCCAGGCCGGCTCTTCAGACTTCTCTACTGGT...ACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp TTTAAGCCGCATGCACTGCCTGAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGGATAGTGCTGTTGGGTaGCAAGGCCTTGGGCACATG +
Preference number: 4 (lower is better)
Translates to: FKPHALPEAPAGHGRMPADSAVG*QGLGHM
Trigger: CATGTGCCCAAGGCCTTGTCACCCAACAGCACTATC...CGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAGGCAGTGCATGCGGCTTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR TCA 90 bp TCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGCGTCCTGATCGTAAGTaGACTTGCCAAGGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: SLVLLEVRAPSKRVGEAARPDRK*TCQGVS
Trigger: GGACACTCCTTGGCAAGTTCACTTACGATCAGGACG...CGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp GCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCGTCCTGATCGTAAGTaGACTTGCCAAGGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: AAQETLPVLFICMGPQAPRPDRK*TCQGVS
Trigger: GGACACTCCTTGGCAAGTTCACTTACGATCAGGACG...AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTCCAGAGATAGTGCAGCATTTGTaGCAGGAGAGCGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: RDGAGRPHHHCIQPHAPEIVQHL*QESAKQ
Trigger: TTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTAT...CTCTGGAGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTAGCTCCCTCCGCTGCTaGTGCTGCCGTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: PSFSSAWGHRLLSCAPRSSSLRC*CCRHRH
Trigger: GTGACGATGACGGCAGCAGCAGCAGCGGAGGGAGCT...ACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCAACAGGCGCTTCATGTTaGTGGATTTCCTCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: KRVGEAAGCCSPTPRWLATGASC*WISSSR
Trigger: CCTTGAAGAGGAAATCCAGCAACATGAAGCGCCTGT...TGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GGGAGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCAGTTGGCGTCACCATaGAGTTCCTCCAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GSRVGPNLASGERKATTVQLASP*SSSREL
Trigger: GAGCTCCCTGGAGGAACTGCATGGTGACGCCAACTG...GACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp GGGAAGGAAGAAGGGAGCTGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCGCATGGCCTCCTTCTaGCAGTTGGAGGAAAATTCA +
Preference number: 4 (lower is better)
Translates to: GKEEGSCWSLLTASSHLLRMASF*QLEENS
Trigger: TGAATTTTCCTCCAACTGGCAGAAGGAGGCCATGCG...CAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAGCAGCAGTTTCCCTaGGGAAATCCTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGEQQFP*GNPPSG
Trigger: CCCTGAAGGAGGATTTCCGCAGGGAAACTGCTGCTC...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGTCTTGCTGATGCTCTaGTCTCAGGGCAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: SLVLLEVRAPSKRVGEAAVLLML*SQGRQF
Trigger: GAACTGTCTGCCCTGAGAGCAGAGCATCAGCAAGAC...CGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GGGAGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCACTCTGACTTCAGCTaGTGGATGCGAGCCTCGGAC +
Preference number: 4 (lower is better)
Translates to: GSRVGPNLASGERKATTVHSDFS*WMRASD
Trigger: GTCCGAGGCTCGCATCCAGCAGCTGAAGTCAGAGTG...GACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGTCCGCCACCGAGCTCTaGTTCAGTGCCAGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGSATEL*FSARAA
Trigger: GGCGGCTCTGGCACTGAAGCAGAGCTCGGTGGCGGA...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGCTTGCCCTGCATCTCTaGCACATGGGTGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: RLEPPAAQETLPVLFICMLALHL*HMGEDL
Trigger: AAGATCCTCACCCATGTGGCAGAGATGCAGGGCAAG...CATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCTGCTTCACGATGTGGTaGACCTGCTCCTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: LSCAPRSQSAEQACGGSGCFTMW*TCSSVT
Trigger: AGTGACAGAGGAGCAGGTGCACCACATCGTGAAGCA...GCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGAGGAGTGTCCCCTCCTaGTGCAGGTCTTCGTCAAAC +
Preference number: 4 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGRSVPS*CRSSSN
Trigger: GTTTGACGAAGACCTGCAGCAGGAGGGGACACTCCT...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GCTACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGCACAGCCCTGGCACCTaGTTCATCAGCTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ATYIHTPRMGSRRHGHRGHSPGT*FISSQA
Trigger: TGCCTGGGAGCTGATGAAGCAGGTGCCAGGGCTGTG...CCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTCAGCTCTCCATCAAGTaGTTCCTGCCTGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSQLSIK*FLPGEV
Trigger: GACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTG...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp AGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCCCTGGAAACGGCCTGTCTaGCACAAAACCCGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: SRVGPNLASGERKATTVPWKRPV*HKTRRR
Trigger: GCGCCTACGGGTTTTGTGCCAGACAGGCCGTTTCCA...GGGGACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS-3UTR CCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAACCTCCAGGGAGCTCCTaGGTGGGAACCAGGACTCGT +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKEPPGSS*VGTRTR
Trigger: ACGAGTCCTGGTTCCCACCCAGGAGCTCCCTGGAGG...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp GGGAGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCTTCGGAGCCGCGAGCTaGAACTCTGCTGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: GSRVGPNLASGERKATTVFGAAS*NSAGPH
Trigger: ATGTGGACCAGCAGAGTTCCAGCTCGCGGCTCCGAA...GACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp TCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGACACGCTGCTCAGCCTaGAAATGTGGCGATGAGTCT +
Preference number: 4 (lower is better)
Translates to: SLVLLEVRAPSKRVGEAATRCSA*KCGDES
Trigger: AGACTCATCGCCACATTTCCAGGCTGAGCAGCGTGT...CGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGCCTCCTTCTGCCAGTTaGAGGAAAATTCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LVLLEVRAPSKRVGEAAGPPSAS*RKIQQQ
Trigger: TTGCTGCTGAATTTTCCTCCAACTGGCAGAAGGAGG...CCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp GCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTGCAGACAGTTCTTCCTaGATGCGAGCAGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: AAQETLPVLFICMGPQAPADSSS*MRAAVS
Trigger: GGAAACTGCTGCTCGCATCCAGGAAGAACTGTCTGC...AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGTTCACAGAGCTCTCCTaGAAGGACTCCTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: SLVLLEVRAPSKRVGEAAFTELS*KDSWVM
Trigger: CATGACCCAGGAGTCCTTCCAGGAGAGCTCTGTGAA...CGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAAGGCCGCGGCTTCCCTaGCCGACTTGCCCTGCATCT +
Preference number: 4 (lower is better)
Translates to: YIYTHSQDGKQTPRAQRERPRLP*PTCPAS
Trigger: AGATGCAGGGCAAGTCGGCCAGGGAAGCCGCGGCCT...TTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp AGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCCTGCTTCACGATGTaGTGCACCTGCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RRPCPSFSSAWGHRLLSCACFTM*CTCSSV
Trigger: GACAGAGGAGCAGGTGCACCACATCGTGAAGCAGGC...ACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp ATGGCCCACTGCTACCCTCCCCGGGACAAATACACACTTTTGTCGAAGGCCCTCATGACTCGGGGTGACTaGGAGTGGTACCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: MAHCYPPRDKYTLLSKALMTRGD*EWYHRG
Trigger: CCCCCTGTGGTACCACTCCCAGTCACCCCGAGTCAT...GAGGGCCTTCGACAAAAGTGTGTATTTGTCCCGGGGAGGGTAGCAGTGGGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp GAAGGTGCCTTCCCCTGTGCTGACGTCTGCAGGATGCGTGTTACACCCCATTTGATGACTCGGGGTGACTaGGAGTGGTACCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: EGAFPCADVCRMRVTPHLMTRGD*EWYHRG
Trigger: CCCCCTGTGGTACCACTCCCAGTCACCCCGAGTCAT...CAAATGGGGTGTAACACGCATCCTGCAGACGTCAGCACAGGGGAAGGCACCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CCA 90 bp CCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTGCCTGGGTGCACATCTaGCTGGAGGATGACTCGGGG +
Preference number: 4 (lower is better)
Translates to: PSFSSAWGHRLLSCAPRSAWVHI*LEDDSG
Trigger: CCCCGAGTCATCCTCCAGCCAGATGTGCACCCAGGC...ACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGGGCCCAGCAGTTGCCTaGGTGCACATCTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FHLHGATGSSLVLLEVRAGPAVA*VHIWLE
Trigger: CTCCAGCCAGATGTGCACCCAGGCAACTGCTGGGCC...CGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTCAAACCCAAAGATaGCGAAGTCCTTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: HGATGSSLVLLEVRAPSKRQTQR*RSPWGH
Trigger: GTGCCCCCAAGGACTTCGCCATCTTTGGGTTTGACG...CTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp GCTTCCCTCATGCTGCCCTTCTGGAAGGTGCCTTCCCCTGTGCTGACGTCTGCACGTCAAACCCAAAGATaGCGAAGTCCTTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: ASLMLPFWKVPSPVLTSARQTQR*RSPWGH
Trigger: GTGCCCCCAAGGACTTCGCCATCTTTGGGTTTGACG...TGCAGACGTCAGCACAGGGGAAGGCACCTTCCAGAAGGGCAGCATGAGGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CCA 90 bp ATGGCCCACTGCTACCCTCCCCGGGACAAATACACACTTTTGTCGAAGGCCCTCCCCTACATCAGGGCCTaGTTAGATGTGGGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: MAHCYPPRDKYTLLSKALPYIRA*LDVGAG
Trigger: ACCGGCCCCCACATCTAACCAGGCCCTGATGTAGGG...GAGGGCCTTCGACAAAAGTGTGTATTTGTCCCGGGGAGGGTAGCAGTGGGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAACATCTGGCTGGAGGATaGCTCGGGGTGACTGGGAGT +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKEHLAGG*LGVTGS
Trigger: ACTCCCAGTCACCCCGAGTCATCCTCCAGCCAGATG...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGCCAGGAACAAGAAACTaGGTATCACCCAGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGPGTRN*VSPSAP
Trigger: TGGGGCACTGGGTGATACTCAGTTTCTTGTTCCTGG...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp TTTAAGCCGCATGCACTGCCTGAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGAGATCGGATGCCCACTaGAGTTTAAGCCGCATGCAC +
Preference number: 4 (lower is better)
Translates to: FKPHALPEAPAGHGRMPARSDAH*SLSRMH
Trigger: GTGCATGCGGCTTAAACTTCAGTGGGCATCCGATCT...CGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAGGCAGTGCATGCGGCTTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR GCA 90 bp TACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAAGCTCCCTCCGCTGCTaGTGCTGCCGTCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: YIYTHSQDGKQTPRAQRESSLRC*CCRHRH
Trigger: GTGACGATGACGGCAGCAGCAGCAGCGGAGGGAGCT...TTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGCGCATGGCCTCCTTCTaGCAGTTGGAGGAAAATTCA +
Preference number: 4 (lower is better)
Translates to: SLVLLEVRAPSKRVGEAARMASF*QLEENS
Trigger: TGAATTTTCCTCCAACTGGCAGAAGGAGGCCATGCG...CGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGAGCAGCAGTTTCCCTaGGGAAATCCTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: RRPCPSFSSAWGHRLLSCEQQFP*GNPPSG
Trigger: CCCTGAAGGAGGATTTCCGCAGGGAAACTGCTGCTC...ACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAAACTTCAGCTGCTGGATaGGAGCCTCGGACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKETSAAG*EPRTPG
Trigger: CCCAGGAGTCCGAGGCTCGCATCCAGCAGCTGAAGT...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGCGAGCTCTGCTTCAGTaGCAGAGCCGCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGRALLQ*QSRQLL
Trigger: CAGGAGCTGGCGGCTCTGGCACTGAAGCAGAGCTCG...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGATCACACCTTCTTTCTaGAGCGTCAGGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HGATGSSLVLLEVRAPSKITPSF*SVRLRE
Trigger: CTCCCTGAGCCTGACGCTGCAGAAAGAAGGTGTGAT...CTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAAAGTCTGCCAGCCCGATaGGGTCCTCACTGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKESLPAR*GPHCSA
Trigger: AGCGCTACAGTGAGGACCGCATCGGGCTGGCAGACT...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGGGAAGGCCCAGCAGTTaGCTGGGTGCACATCTGGCT +
Preference number: 4 (lower is better)
Translates to: FHLHGATGSSLVLLEVRAGRPSS*LGAHLA
Trigger: AGCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCC...CGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TCACAGCAGCCAGTCCCCTTTAGGGCACAAGAAGCCCCATGGCCCACTGCTACCAAGGCCTTGGGCACATaGTCTAAGGTAACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SQQPVPFRAQEAPWPTATKALGT*SKVTAV
Trigger: CACAGCCGTTACCTTAGAGCATGTGCCCAAGGCCTT...GGTAGCAGTGGGCCATGGGGCTTCTTGTGCCCTAAAGGGGACTGGCTGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAACACAGCCCTGGCACCTaGTTCATCAGCTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKEHSPGT*FISSQA
Trigger: TGCCTGGGAGCTGATGAAGCAGGTGCCAGGGCTGTG...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAAGCCCCATGGCCCACTaGTACCCTCCCCGGGACAAA +
Preference number: 4 (lower is better)
Translates to: YIYTHSQDGKQTPRAQRESPMAH*YPPRDK
Trigger: TTTGTCCCGGGGAGGGTAGCAGTGGGCCATGGGGCT...TTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGAGCCCAGGAGTTCCATaGTCCCCACTCTTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: HGATGSSLVLLEVRAPSKSPGVP*SPLFLL
Trigger: TAGCAAGAAGAGTGGGGAGCATGGAACTCCTGGGCT...CTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp AGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTTACCTGAACAAGAGCTaGAAGAGCCCAAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RRPCPSFSSAWGHRLLSCYLNKS*KSPRGQ
Trigger: CTGCCCCCTTGGGCTCTTGCAGCTCTTGTTCAGGTA...ACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CCTTGTAGGAGAGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCCTGCATCCAGCCTCATaGTCCAGAGCGGATTTGAGG +
Preference number: 4 (lower is better)
Translates to: PCRRAGQLSIKCFLPGEVLHPAS*SRADLR
Trigger: CCTCAAATCCGCTCTGGAGCATGAGGCTGGATGCAG...GACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCTCTCCTACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp GGGAGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCGGGACATGATGAGGTaGGATGTGGACTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GSRVGPNLASGERKATTVRDMMR*DVDSSP
Trigger: AGGGGAAGAGTCCACATCCCACCTCATCATGTCCCG...GACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp GCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTGGCGCTTCATGTTGCTaGATTTCCTCTTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: AAQETLPVLFICMGPQAPGASCC*ISSSRS
Trigger: GGACCTTGAAGAGGAAATCCAGCAACATGAAGCGCC...AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTTCTGAAGAGCCGGCCTaGCGAAGTGGCCACCATCCA +
Preference number: 4 (lower is better)
Translates to: PSFSSAWGHRLLSCAPRSSEEPA*RSGHHP
Trigger: TGGATGGTGGCCACTTCGCCAGGCCGGCTCTTCAGA...ACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CCTGACCCCAGCCAAGACCAGTCAGGTCCTACCTCTCCCAACTTCCCAGTCCCCGGGACGAGAAGCGCCTaGTTAAAACGAAGACGTCAA +
Preference number: 4 (lower is better)
Translates to: PDPSQDQSGPTSPNFPVPGTRSA*LKRRRQ
Trigger: TTGACGTCTTCGTTTTAACCAGGCGCTTCTCGTCCC...GGGGACTGGGAAGTTGGGAGAGGTAGGACCTGACTGGTCTTGGCTGGGGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGACACGCTGCTCAGCCTaGAAATGTGGCGATGAGTCT +
Preference number: 4 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGTRCSA*KCGDES
Trigger: AGACTCATCGCCACATTTCCAGGCTGAGCAGCGTGT...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TCACAGCAGCCAGTCCCCTTTAGGGCACAAGAAGCCCCATGGCCCACTGCTACCTTCACAGAGCTCTCCTaGAAGGACTCCTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: SQQPVPFRAQEAPWPTATFTELS*KDSWVM
Trigger: CATGACCCAGGAGTCCTTCCAGGAGAGCTCTGTGAA...GGTAGCAGTGGGCCATGGGGCTTCTTGTGCCCTAAAGGGGACTGGCTGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATGCAGGCCGGCCAGCTaGTCCTCCAGCCGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGCRPAS*SSSRLS
Trigger: GCTGAGGCGGCTGGAGGACCAGCTGGCCGGCCTGCA...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGCATCTCTGCCACATaGGTGAGGATCTTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSCISAT*VRILLS
Trigger: GGAGAGCAAGATCCTCACCCATGTGGCAGAGATGCA...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGATGACTCGGGGTGACTaGGAGTGGTACCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: FHLHGATGSSLVLLEVRAMTRGD*EWYHRG
Trigger: CCCCCTGTGGTACCACTCCCAGTCACCCCGAGTCAT...CGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGCGCAGCTCCACCACCTaGTACGTGGCCATCGTAGGG +
Preference number: 4 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGRSSTT*YVAIVG
Trigger: CCCTACGATGGCCACGTACCAGGTGGTGGAGCTGCG...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGTACCCTGGGAGAATGTaGAAAGCAAGCTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGYPGRM*KASSGA
Trigger: TGCCCCTGAGCTTGCTTTCCACATTCTCCCAGGGTA...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATCTGGCTGCCTCGGGATaGAGCGGGGCGGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: LPTSQSPMICYIYTHSQDLAASG*SGAASP
Trigger: TGGTGAGGCCGCCCCGCTCCATCCCGAGGCAGCCAG...ATCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp TTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGGCGCAAAACAAACCCTaGCTGCCTCGGGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: FHLHGATGSSLVLLEVRAAQNKP*LPRDGA
Trigger: CGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGC...CGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CTTTCCTGGCCACCCAACCCCTCTTGTGTAAAGCCCACCTCCTGGTGTCCTTTTTCTGAACCCCATGCCTaGCAGGGTAAGTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSWPPNPSCVKPTSWCPFSEPHA*QGKCPG
Trigger: CCCTGGGCACTTACCCTGCCAGGCATGGGGTTCAGA...AAAAGGACACCAGGAGGTGGGCTTTACACAAGAGGGGTTGGGTGGCCAGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455125.1
3UTR CAA 72 bp GCCCACTGCTACCCTCCCCGGGACAAATACACACTTTaGTCGAAGGCCCTCAGGGACCCTGTGGTTCATGCT +
Preference number: 4 (lower is better)
Translates to: AHCYPPRDKYTL*SKALRDPVVHA
Trigger: AGCATGAACCACAGGGTCCCTGAGGGCCTTCGACAAAAGTGTGTATTTGTCCCGGGGAGGGTAGCAGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp CAGACCTCGCACCCCGATACCCTGAACGTCCCCACAAGAGCCCAGGAGTTCCATCCCGGACGATCTTCTTaGAGAGGTCTTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: QTSHPDTLNVPTRAQEFHPGRSS*RGLLSL
Trigger: AAGACTCAGAAGACCTCTTCAAGAAGATCGTCCGGG...ATGGAACTCCTGGGCTCTTGTGGGGACGTTCAGGGTATCGGGGTGCGAGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp GGAGAGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCCCATCCTCCCGGACGATCTTCTTaGAGAGGTCTTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GELGSSPSSASCLGKSHPPGRSS*RGLLSL
Trigger: AAGACTCAGAAGACCTCTTCAAGAAGATCGTCCGGG...AGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGGGGCAAGGAACTGACTaGTCCAGGCCGGGAACTGAG +
Preference number: 4 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGGQGTD*SRPGTE
Trigger: CTCAGTTCCCGGCCTGGATCAGTCAGTTCCTTGCCC...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp AGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCCCCGTCCTGATCGTAAGTaGACTTGCCAAGGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: SRVGPNLASGERKATTVPRPDRK*TCQGVS
Trigger: GGACACTCCTTGGCAAGTTCACTTACGATCAGGACG...GGGGACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGACAGGCGCTTCATGTTaGTGGATTTCCTCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SLVLLEVRAPSKRVGEAATGASC*WISSSR
Trigger: CCTTGAAGAGGAAATCCAGCAACATGAAGCGCCTGT...CGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGAAGTCCTCGGTGGCCTTaGGCCCCACAAGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGSPRWP*APQARW
Trigger: CCAGCGGGCTTGTGGGGCGCAAGGCCACCGAGGACT...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCTGCTGTCCTTCGCTaGCCACCAGGAAACCAAAGC +
Preference number: 4 (lower is better)
Translates to: FHLHGATGSSLVLLEVRAPAVLR*PPGNQS
Trigger: GCTTTGGTTTCCTGGTGGGCAGCGAAGGACAGCAGG...CGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp ATAACCCCAGATGCTAATGGCCCCAAAGACAGGTCTAGGTCTCCATACCCTGGGACTTCAGCTGCTGGATaGGAGCCTCGGACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ITPDANGPKDRSRSPYPGTSAAG*EPRTPG
Trigger: CCCAGGAGTCCGAGGCTCGCATCCAGCAGCTGAAGT...CCCAGGGTATGGAGACCTAGACCTGTCTTTGGGGCCATTAGCATCTGGGGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGAGGACTCCTGGGTCATaGTTTGCCACTCTGACTTCA +
Preference number: 4 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGRTPGS*FATLTS
Trigger: TGAAGTCAGAGTGGCAAAGCATGACCCAGGAGTCCT...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTTGCTTCACGATGTGGTaGACCTGCTCCTCTGTCACT +
Preference number: 4 (lower is better)
Translates to: RRPCPSFSSAWGHRLLSCCFTMW*TCSSVT
Trigger: AGTGACAGAGGAGCAGGTGCACCACATCGTGAAGCA...ACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp ATAACCCCAGATGCTAATGGCCCCAAAGACAGGTCTAGGTCTCCATACCCTGGGAGTCTGCCAGCCCGATaGGGTCCTCACTGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: ITPDANGPKDRSRSPYPGSLPAR*GPHCSA
Trigger: AGCGCTACAGTGAGGACCGCATCGGGCTGGCAGACT...CCCAGGGTATGGAGACCTAGACCTGTCTTTGGGGCCATTAGCATCTGGGGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCCCGTCCTTTTCATCTaGATGGGGCCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSFSSAWGHRLLSCAPRSPVLFI*MGPQAP
Trigger: AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGG...ACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GCTACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGCTGCTCAGGAGACCCTaGCCGTCCTTTTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: ATYIHTPRMGSRRHGHRGLLRRP*PSFSSA
Trigger: TGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAG...CCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGAAGGAAGAAGGGAGCTaGTGGAGCCTGCTAACCGCC +
Preference number: 4 (lower is better)
Translates to: FHLHGATGSSLVLLEVRAKEEGS*WSLLTA
Trigger: GGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCCTT...CGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTGGACCCTGTGGTTCATaGTTCCCTAGGTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSFSSAWGHRLLSCAPRSGPCGS*FPRWRA
Trigger: TGCCCTCCACCTAGGGAAGCATGAACCACAGGGTCC...ACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp ATGGCCCACTGCTACCCTCCCCGGGACAAATACACACTTTTGTCGAAGGCCCTCCTGCATCCAGCCTCATaGTCCAGAGCGGATTTGAGG +
Preference number: 4 (lower is better)
Translates to: MAHCYPPRDKYTLLSKALLHPAS*SRADLR
Trigger: CCTCAAATCCGCTCTGGAGCATGAGGCTGGATGCAG...GAGGGCCTTCGACAAAAGTGTGTATTTGTCCCGGGGAGGGTAGCAGTGGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAAAAACAAACCCTGGCTaGCTCGGGATGGAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: YIYTHSQDGKQTPRAQREKTNPG*LGMERG
Trigger: GCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTT...TTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGTCAGGCGGTACCAGGTaGTGCCAGCCCACCAGTAGA +
Preference number: 4 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGSGGTR*CQPTSR
Trigger: TCTACTGGTGGGCTGGCACCACCTGGTACCGCCTGA...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGCCTCCTTCTGCCAGTTaGAGGAAAATTCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RLEPPAAQETLPVLFICMPPSAS*RKIQQQ
Trigger: TTGCTGCTGAATTTTCCTCCAACTGGCAGAAGGAGG...CATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CCTTGTAGGAGAGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCGCAGACAGTTCTTCCTaGATGCGAGCAGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: PCRRAGQLSIKCFLPGEVADSSS*MRAAVS
Trigger: GGAAACTGCTGCTCGCATCCAGGAAGAACTGTCTGC...GACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCTCTCCTACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp GGGAGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCTCCTGGAAGGACTCCTaGGTCATGCTTTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: GSRVGPNLASGERKATTVSWKDS*VMLCHS
Trigger: AGAGTGGCAAAGCATGACCCAGGAGTCCTTCCAGGA...GACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp GGGAGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCTGCATCTCTGCCACATaGGTGAGGATCTTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GSRVGPNLASGERKATTVCISAT*VRILLS
Trigger: GGAGAGCAAGATCCTCACCCATGTGGCAGAGATGCA...GACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp TTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGGCCTGCTTCACGATGTaGTGCACCTGCTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: FHLHGATGSSLVLLEVRAACFTM*CTCSSV
Trigger: GACAGAGGAGCAGGTGCACCACATCGTGAAGCAGGC...CGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGAAGCCTTGTGGCCCCTaGAAGGCCCAGCAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGKPCGP*KAQQLP
Trigger: AGGCAACTGCTGGGCCTTCCAGGGGCCACAAGGCTT...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp TTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCAGGTGTACTCGGGGTaGCCCCAGTTAGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: FHLHGATGSSLVLLEVRAQVYSG*PQLVRI
Trigger: GATCCTGACTAACTGGGGCCACCCCGAGTACACCTG...CGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CTGCCTCGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTATATACATAATACAGTaGGGCCTGCTGGCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: LPRDGAGRPHHHCIQPHAIYIIQ*GLLALK
Trigger: TTTTAGAGCCAGCAGGCCCCACTGTATTATGTATAT...AGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp GCTACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGAGAATCCTGGCTTaGCGCCTGCCACCTGTATCC +
Preference number: 4 (lower is better)
Translates to: ATYIHTPRMGSRRHGHRGKRILA*RLPPVS
Trigger: GGATACAGGTGGCAGGCGCCAAGCCAGGATTCTCTT...CCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406622.5
CDS-3UTR TCA 90 bp CCTTGTAGGAGAGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCCTTGAAGAGGTCTTCTaGGTCTTGCTGATGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PCRRAGQLSIKCFLPGEVLEEVF*VLLMLC
Trigger: GCAGAGCATCAGCAAGACTCAGAAGACCTCTTCAAG...GACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCTCTCCTACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAAGATAGTGCTGTTGGGTaGCAAGGCCTTGGGCACATG +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKEDSAVG*QGLGHM
Trigger: CATGTGCCCAAGGCCTTGTCACCCAACAGCACTATC...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCCCATCCTGCTCACAGGCGCTTCATGTTaGTGGATTTCCTCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SWAALHQVLPAWGSPILLTGASC*WISSSR
Trigger: CCTTGAAGAGGAAATCCAGCAACATGAAGCGCCTGT...GAGCAGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAACAGTTGGCGTCACCATaGAGTTCCTCCAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: YIYTHSQDGKQTPRAQREQLASP*SSSREL
Trigger: GAGCTCCCTGGAGGAACTGCATGGTGACGCCAACTG...TTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATTCTCTGAGCCACCCGTaGCTCTCCTCCTCCGCACCC +
Preference number: 4 (lower is better)
Translates to: LPTSQSPMICYIYTHSQDSLSHP*LSSSAP
Trigger: GGGTGCGGAGGAGGAGAGGCACGGGTGGCTCAGAGA...ATCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp GCTACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGCTTGCCCTGCATCTCTaGCACATGGGTGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: ATYIHTPRMGSRRHGHRGLALHL*HMGEDL
Trigger: AAGATCCTCACCCATGTGGCAGAGATGCAGGGCAAG...CCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAACTTCCCTGGCCGACTTaGCCTGCATCTCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: YIYTHSQDGKQTPRAQRELPWPT*PASLPH
Trigger: ATGTGGCAGAGATGCAGGGCAAGTCGGCCAGGGAAG...TTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTAGTGTCCCCTCCTGCTaGAGGTCTTCGTCAAACCCA +
Preference number: 4 (lower is better)
Translates to: PSFSSAWGHRLLSCAPRSSVPSC*RSSSNP
Trigger: TGGGTTTGACGAAGACCTGCAGCAGGAGGGGACACT...ACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAACCCGTCCTTTTCATCTaGATGGGGCCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: YIYTHSQDGKQTPRAQREPVLFI*MGPQAP
Trigger: AGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGG...TTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGAAGGAAGAAGGGAGCTaGTGGAGCCTGCTAACCGCC +
Preference number: 4 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGKEEGS*WSLLTA
Trigger: GGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCCTT...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGAAGGGCCTCGCTTCCTTaGCCAGGGGCAGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGRASLP*PGAEAA
Trigger: AGCTGCCTCTGCCCCTGGGCAAGGAAGCGAGGCCCT...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGGGATTTGAGGCTCAGTaGTGCAGTGAAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGGFEAQ*CSEGLP
Trigger: GGGCAGGCCTTCACTGCAGCACTGAGCCTCAAATCC...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp ATAACCCCAGATGCTAATGGCCCCAAAGACAGGTCTAGGTCTCCATACCCTGGGGGATTTGAGGCTCAGTaGTGCAGTGAAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ITPDANGPKDRSRSPYPGGFEAQ*CSEGLP
Trigger: GGGCAGGCCTTCACTGCAGCACTGAGCCTCAAATCC...CCCAGGGTATGGAGACCTAGACCTGTCTTTGGGGCCATTAGCATCTGGGGTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CTACCTCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCCAGGAAGTCCTCGGTaGCCTTGCGCCCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: LPLPTSQSPMICYIYTHSPGSPR*PCAPQA
Trigger: GGCTTGTGGGGCGCAAGGCCACCGAGGACTTCCTGG...GGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGAGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATCGAGCCTCGGACTCCTaGGAGGCCCGGACGATCTTC +
Preference number: 4 (lower is better)
Translates to: LPTSQSPMICYIYTHSQDRASDS*EARTIF
Trigger: GAAGATCGTCCGGGCCTCCCAGGAGTCCGAGGCTCG...ATCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAATCTGACTTCAGCTGCTaGATGCGAGCCTCGGACTCC +
Preference number: 4 (lower is better)
Translates to: YIYTHSQDGKQTPRAQRESDFSC*MRASDS
Trigger: GGAGTCCGAGGCTCGCATCCAGCAGCTGAAGTCAGA...TTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATCGGGGTGACTGGGAGTaGTACCACAGGGGGATGCCG +
Preference number: 4 (lower is better)
Translates to: LPTSQSPMICYIYTHSQDRGDWE*YHRGMP
Trigger: CGGCATCCCCCTGTGGTACCACTCCCAGTCACCCCG...ATCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAATCTTCTGAGTCTTGCTaGTGCTCTGCTCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKESSESC*CSALRA
Trigger: TGCCCTGAGAGCAGAGCATCAGCAAGACTCAGAAGA...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp TACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAATCTCTGCCACATGGGTaGGGATCTTGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: YIYTHSQDGKQTPRAQRESLPHG*GSCSPA
Trigger: AGCTGGAGAGCAAGATCCTCACCCATGTGGCAGAGA...TTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATGGATGCCGAAGAGGCTaGGGAGGGCCGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LPTSQSPMICYIYTHSQDGCRRG*GGPSWS
Trigger: AGACCAAGACGGCCCTCCTCAGCCTCTTCGGCATCC...ATCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTATAGTGCAGCATTTGTaGCAGGAGAGCGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSIVQHL*QESAKQ
Trigger: TTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTAT...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CCTTGTAGGAGAGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCGAAGGAGGTGACACCTaGAGAAATTGTCACCAAAGG +
Preference number: 4 (lower is better)
Translates to: PCRRAGQLSIKCFLPGEVEGGDT*RNCHQR
Trigger: CCTTTGGTGACAATTTCTGCAGGTGTCACCTCCTTC...GACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCTCTCCTACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS-3UTR GCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAACTTGCCCTGCATCTCTaGCACATGGGTGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKELALHL*HMGEDL
Trigger: AAGATCCTCACCCATGTGGCAGAGATGCAGGGCAAG...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp ATAACCCCAGATGCTAATGGCCCCAAAGACAGGTCTAGGTCTCCATACCCTGGGAGGAGTGTCCCCTCCTaGTGCAGGTCTTCGTCAAAC +
Preference number: 4 (lower is better)
Translates to: ITPDANGPKDRSRSPYPGRSVPS*CRSSSN
Trigger: GTTTGACGAAGACCTGCAGCAGGAGGGGACACTCCT...CCCAGGGTATGGAGACCTAGACCTGTCTTTGGGGCCATTAGCATCTGGGGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGACCTCCAGGGAGCTCCTaGGTGGGAACCAGGACTCGT +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGPPGSS*VGTRTR
Trigger: ACGAGTCCTGGTTCCCACCCAGGAGCTCCCTGGAGG...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGAGCCGGCCTGGCGAAGTaGCCACCATCCAGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGAGLAK*PPSRVR
Trigger: CCTTACTCTGGATGGTGGCCACTTCGCCAGGCCGGC...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp GGGAGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCCTCCTTCTGCCAGTTaGAGGAAAATTCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: GSRVGPNLASGERKATTVPPSAS*RKIQQQ
Trigger: TTGCTGCTGAATTTTCCTCCAACTGGCAGAAGGAGG...GACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTGCAGACAGTTCTTCCTaGATGCGAGCAGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: PSFSSAWGHRLLSCAPRSADSSS*MRAAVS
Trigger: GGAAACTGCTGCTCGCATCCAGGAAGAACTGTCTGC...ACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAATTCACAGAGCTCTCCTaGAAGGACTCCTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKEFTELS*KDSWVM
Trigger: CATGACCCAGGAGTCCTTCCAGGAGAGCTCTGTGAA...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAACGTCAAACCCAAAGATaGCGAAGTCCTTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: YIYTHSQDGKQTPRAQRERQTQR*RSPWGH
Trigger: GTGCCCCCAAGGACTTCGCCATCTTTGGGTTTGACG...TTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGTCCTTTTCATCTGCATaGGGCCACAGGCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: FHLHGATGSSLVLLEVRASFSSA*GHRLLS
Trigger: AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGA...CGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp TTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCTTGAAGAGGTCTTCTaGGTCTTGCTGATGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FHLHGATGSSLVLLEVRALEEVF*VLLMLC
Trigger: GCAGAGCATCAGCAAGACTCAGAAGACCTCTTCAAG...CGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp AGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTCTTCCCAGTCCCCCATaGTATGCTACATATATACAC +
Preference number: 4 (lower is better)
Translates to: RRPCPSFSSAWGHRLLSCLPSPP*YATYIH
Trigger: GTGTATATATGTAGCATATCATGGGGGACTGGGAAG...ACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGAACGCATGGCCTCCTTCTaGCAGTTGGAGGAAAATTCA +
Preference number: 4 (lower is better)
Translates to: YIHTPRMGSRRHGHRGKERMASF*QLEENS
Trigger: TGAATTTTCCTCCAACTGGCAGAAGGAGGCCATGCG...TTCCTTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGTCCTGGGTCATGCTTTaGCACTCTGACTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGSWVML*HSDFSC
Trigger: GCAGCTGAAGTCAGAGTGGCAAAGCATGACCCAGGA...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp CCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTAGGACTCCTGGGTCATaGTTTGCCACTCTGACTTCA +
Preference number: 4 (lower is better)
Translates to: PSFSSAWGHRLLSCAPRSRTPGS*FATLTS
Trigger: TGAAGTCAGAGTGGCAAAGCATGACCCAGGAGTCCT...ACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTACCTCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCAGTCTGCCAGCCCGATaGGGTCCTCACTGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: LPLPTSQSPMICYIYTHSSLPAR*GPHCSA
Trigger: AGCGCTACAGTGAGGACCGCATCGGGCTGGCAGACT...GGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGAGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATCGGCCTCACCACCACTaGATCCAGCCTCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPTSQSPMICYIYTHSQDRPHHH*IQPHAP
Trigger: TGGAGCATGAGGCTGGATGCAGTGGTGGTGAGGCCG...ATCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR GCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGACGGCCTCACCACCACTaGATCCAGCCTCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGRPHHH*IQPHAP
Trigger: TGGAGCATGAGGCTGGATGCAGTGGTGGTGAGGCCG...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGACAAAGGCGCGCCTCCTaGCTCTCTAAGTCACACCGC +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGQRRAS*LSKSHR
Trigger: GCGGTGTGACTTAGAGAGCCAGGAGGCGCGCCTTTG...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS-3UTR CCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGAGTGGCGATGAGTCTCTaGCTTCCCAGCCCTCATCCG +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGVAMSL*LPSPHP
Trigger: CGGATGAGGGCTGGGAAGCCAGAGACTCATCGCCAC...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGACACGCTGCTCAGCCTaGAAATGTGGCGATGAGTCT +
Preference number: 4 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGTRCSA*KCGDES
Trigger: AGACTCATCGCCACATTTCCAGGCTGAGCAGCGTGT...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp ATAACCCCAGATGCTAATGGCCCCAAAGACAGGTCTAGGTCTCCATACCCTGGGTCCTGGAAGGACTCCTaGGTCATGCTTTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: ITPDANGPKDRSRSPYPGSWKDS*VMLCHS
Trigger: AGAGTGGCAAAGCATGACCCAGGAGTCCTTCCAGGA...CCCAGGGTATGGAGACCTAGACCTGTCTTTGGGGCCATTAGCATCTGGGGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGACAAGCTCAGGGGCACTaGCAGGCCCTAGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGQAQGH*QALAGT
Trigger: TGTTCCTGCTAGGGCCTGCCAGTGCCCCTGAGCTTG...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp CTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCATATACATAATACAGTaGGGCCTGCTGGCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: LSCAPRSQSAEQACGGSGIYIIQ*GLLALK
Trigger: TTTTAGAGCCAGCAGGCCCCACTGTATTATGTATAT...GCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp GCTTCCCTCATGCTGCCCTTCTGGAAGGTGCCTTCCCCTGTGCTGACGTCTGCAGTGTTACACCCCATTTaGATATCACATCTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ASLMLPFWKVPSPVLTSAVLHPI*ISHLEL
Trigger: CAGCTCAAGATGTGATATCCAAATGGGGTGTAACAC...TGCAGACGTCAGCACAGGGGAAGGCACCTTCCAGAAGGGCAGCATGAGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR TCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGAACCAGTAGAGAAGTCTaGAGAGCCGGCCTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGTSREV*RAGLAK
Trigger: CTTCGCCAGGCCGGCTCTTCAGACTTCTCTACTGGT...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp GCTACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGCTTCCCAGTCCCCCATaGTATGCTACATATATACAC +
Preference number: 4 (lower is better)
Translates to: ATYIHTPRMGSRRHGHRGLPSPP*YATYIH
Trigger: GTGTATATATGTAGCATATCATGGGGGACTGGGAAG...CCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATCAGTTGGCGTCACCATaGAGTTCCTCCAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LPTSQSPMICYIYTHSQDQLASP*SSSREL
Trigger: GAGCTCCCTGGAGGAACTGCATGGTGACGCCAACTG...ATCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGGGACGAGAAGCGCCTaGTTAAAACGAAGACGTCAA +
Preference number: 4 (lower is better)
Translates to: YIYTHSQDGKQTPRAQREGTRSA*LKRRRQ
Trigger: TTGACGTCTTCGTTTTAACCAGGCGCTTCTCGTCCC...TTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATCTGACTTCAGCTGCTaGATGCGAGCCTCGGACTCC +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGSDFSC*MRASDS
Trigger: GGAGTCCGAGGCTCGCATCCAGCAGCTGAAGTCAGA...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGACGGGACATAACACGCTaGTCAGCCTGGAAATGTGGC +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGRDITR*SAWKCG
Trigger: GCCACATTTCCAGGCTGAGCAGCGTGTTATGTCCCG...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTACCTCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCAGGAGTGTCCCCTCCTaGTGCAGGTCTTCGTCAAAC +
Preference number: 4 (lower is better)
Translates to: LPLPTSQSPMICYIYTHSRSVPS*CRSSSN
Trigger: GTTTGACGAAGACCTGCAGCAGGAGGGGACACTCCT...GGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGAGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGACAGCTCTCCATCAAGTaGTTCCTGCCTGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGQLSIK*FLPGEV
Trigger: GACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTG...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR TCA 90 bp CTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATTCTTCTGAGTCTTGCTaGTGCTCTGCTCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPTSQSPMICYIYTHSQDSSESC*CSALRA
Trigger: TGCCCTGAGAGCAGAGCATCAGCAAGACTCAGAAGA...ATCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGAGTCTTGCTGATGCTCTaGTCTCAGGGCAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGVLLML*SQGRQF
Trigger: GAACTGTCTGCCCTGAGAGCAGAGCATCAGCAAGAC...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTACCTCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCTCCTGGGTCATGCTTTaGCACTCTGACTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLPTSQSPMICYIYTHSSWVML*HSDFSC
Trigger: GCAGCTGAAGTCAGAGTGGCAAAGCATGACCCAGGA...GGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGAGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR GCA 90 bp CTACCTCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCAAGGCCTTGGGCACATaGTCTAAGGTAACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LPLPTSQSPMICYIYTHSKALGT*SKVTAV
Trigger: CACAGCCGTTACCTTAGAGCATGTGCCCAAGGCCTT...GGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGAGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATGCATCTCTGCCACATaGGTGAGGATCTTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGCISAT*VRILLS
Trigger: GGAGAGCAAGATCCTCACCCATGTGGCAGAGATGCA...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CTACCTCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCTCCTTTTCATCTGCATaGGGCCACAGGCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LPLPTSQSPMICYIYTHSSFSSA*GHRLLS
Trigger: AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGA...GGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGAGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CCA 90 bp CTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATTACCCTGGGAGAATGTaGAAAGCAAGCTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LPTSQSPMICYIYTHSQDYPGRM*KASSGA
Trigger: TGCCCCTGAGCTTGCTTTCCACATTCTCCCAGGGTA...ATCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CCA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGAGGGGAACGAGGACACTaGCTCAGTCTCTGTCACTTT +
Preference number: 4 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGGERGH*LSLCHF
Trigger: AAAGTGACAGAGACTGAGCCAGTGTCCTCGTTCCCC...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405018.5
CDS-3UTR TCA 90 bp CTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATCTTGAAGAGGTCTTCTaGGTCTTGCTGATGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LPTSQSPMICYIYTHSQDLEEVF*VLLMLC
Trigger: GCAGAGCATCAGCAAGACTCAGAAGACCTCTTCAAG...ATCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR TCA 90 bp CTACCTCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCTTCCCAGTCCCCCATaGTATGCTACATATATACAC +
Preference number: 4 (lower is better)
Translates to: LPLPTSQSPMICYIYTHSLPSPP*YATYIH
Trigger: GTGTATATATGTAGCATATCATGGGGGACTGGGAAG...GGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGAGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS CCA 90 bp CGGCCTGTCTGGCACAAAACCCGTAGGCGCTGCCCGGGGCCGGGTTaGGGCAGTCGGCCTTTGCCCTCCTCCTCCCGGGAGGCTGCCCGG +
Preference number: 5 (lower is better)
Translates to: RPVWHKTRRRCPGPG*GSRPLPSSSREAAR
Trigger: CCGGGCAGCCTCCCGGGAGGAGGAGGGCAAAGGCCGACTGCCCCAACCCGGCCCCGGGCAGCGCCTACGGGTTTTGTGCCAGACAGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS TCA 90 bp CTCGGTGGCCTTGCGCCCCACAAGCCCGCTGGCCCTGCTGCTCTCTaGGCCACCCGTGCCTCTCCTCCTCCGCACCCGCAGGTCCTCACC +
Preference number: 5 (lower is better)
Translates to: LGGLAPHKPAGPAAL*ATRASPPPHPQVLT
Trigger: GGTGAGGACCTGCGGGTGCGGAGGAGGAGAGGCACGGGTGGCTCAGAGAGCAGCAGGGCCAGCGGGCTTGTGGGGCGCAAGGCCACCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000452294.5
ENST00000456894.5
ENST00000480307.1
ENST00000494273.1
CDS GCA 90 bp GGAAGTCCTCGGTGGCCTTGCGCCCCACAAGCCCGCTGGCCCTGCTaGTCTCTGAGCCACCCGTGCCTCTCCTCCTCCGCACCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: GSPRWPCAPQARWPC*SLSHPCLSSSAPAG
Trigger: ACCTGCGGGTGCGGAGGAGGAGAGGCACGGGTGGCTCAGAGAGCAGCAGGGCCAGCGGGCTTGTGGGGCGCAAGGCCACCGAGGACTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000452294.5
ENST00000456894.5
ENST00000480307.1
ENST00000494273.1
CDS GCA 90 bp CCAGGAAGTCCTCGGTGGCCTTGCGCCCCACAAGCCCGCTGGCCCTaGTGCTCTCTGAGCCACCCGTGCCTCTCCTCCTCCGCACCCGCA +
Preference number: 5 (lower is better)
Translates to: PGSPRWPCAPQARWP*CSLSHPCLSSSAPA
Trigger: TGCGGGTGCGGAGGAGGAGAGGCACGGGTGGCTCAGAGAGCAGCAGGGCCAGCGGGCTTGTGGGGCGCAAGGCCACCGAGGACTTCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000452294.5
ENST00000456894.5
ENST00000480307.1
ENST00000494273.1
CDS GCA 90 bp CTGGGGCAGCAGGCCCACTTCTTCCGCCACCGAGCTCTGCTTCAGTaGCAGAGCCGCCAGCTCCTGCTGCAGGCCGGCCAGCTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: LGQQAHFFRHRALLQ*QSRQLLLQAGQLVL
Trigger: GAGGACCAGCTGGCCGGCCTGCAGCAGGAGCTGGCGGCTCTGGCACTGAAGCAGAGCTCGGTGGCGGAAGAAGTGGGCCTGCTGCCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000469086.5
ENST00000477262.5
CDS CCA 90 bp TGTGGGGCGGATGCGGGCAGAGAGGCGGACCACGGCGAAGCCTTGTaGCCCCTGGAAGGCCCAGCAGTTGCCTGGGTGCACATCTGGCTG +
Preference number: 5 (lower is better)
Translates to: CGADAGREADHGEAL*PLEGPAVAWVHIWL
Trigger: CAGCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCAGGGGCCACAAGGCTTCGCCGTGGTCCGCCTCTCTGCCCGCATCCGCCCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000455125.1
ENST00000470642.1
CDS-3UTR CAA 90 bp CTGCCTCGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTAAGTCCTCGGTGGCCTaGCGCCCCACAAGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LPRDGAGRPHHHCIQPHAKSSVA*RPTSPL
Trigger: CAGCGGGCTTGTGGGGCGCAAGGCCACCGAGGACTT...AGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CAA 90 bp CCTGGCATGTGCTGGCGGCGGCTCCTCGAACGCCTCTCCCGGCCTTCCTTTCCTGACCACGGCGAAGCCTaGTGGCCCCTGGAAGGCCCA +
Preference number: 5 (lower is better)
Translates to: PGMCWRRLLERLSRPSFPDHGEA*WPLEGP
Trigger: TGGGCCTTCCAGGGGCCACAAGGCTTCGCCGTGGTC...AGGAAAGGAAGGCCGGGAGAGGCGTTCGAGGAGCCGCCGCCAGCACATGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS TCA 90 bp GAAGGAGCCCCACGCGGCCCCCTCCACCTCGGGCAAGGAACTGACTaGTCCAGGCCGGGAACTGAGATTCCACGTCGTCCCGCACGGCCT +
Preference number: 5 (lower is better)
Translates to: EGAPRGPLHLGQGTD*SRPGTEIPRRPARP
Trigger: AGGCCGTGCGGGACGACGTGGAATCTCAGTTCCCGGCCTGGATCAGTCAGTTCCTTGCCCGAGGTGGAGGGGGCCGCGTGGGGCTCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000469086.5
ENST00000477262.5
CDS TCA 90 bp GAGCAGGCCGAGGCCAGCTGGTGGCGCCCAGTACCTTTGCCACTCTaGCTTCAGCTGCTGGATGCGAGCCTCGGACTCCTGGGAGGCCCG +
Preference number: 5 (lower is better)
Translates to: EQAEASWWRPVPLPL*LQLLDASLGLLGGP
Trigger: CGGGCCTCCCAGGAGTCCGAGGCTCGCATCCAGCAGCTGAAGTCAGAGTGGCAAAGGTACTGGGCGCCACCAGCTGGCCTCGGCCTGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469086.5
ENST00000477262.5
CDS CCA 90 bp CGTCCTCAGAGGAGTAGCCCGAGGAAGAGCCCAGGAAGTCCTCGGTaGCCTTGCGCCCCACAAGCCCGCTGGCCCTGCTGCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: RPQRSSPRKSPGSPR*PCAPQARWPCCSLS
Trigger: GCTCAGAGAGCAGCAGGGCCAGCGGGCTTGTGGGGCGCAAGGCCACCGAGGACTTCCTGGGCTCTTCCTCGGGCTACTCCTCTGAGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000452294.5
ENST00000456894.5
ENST00000480307.1
ENST00000494273.1
CDS CCA 90 bp CGGATGCGGGCAGAGAGGCGGACCACGGCGAAGCCTTGTGGCCCCTaGAAGGCCCAGCAGTTGCCTGGGTGCACATCTGGCTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: RMRAERRTTAKPCGP*KAQQLPGCTSGWRM
Trigger: CATCCTCCAGCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCAGGGGCCACAAGGCTTCGCCGTGGTCCGCCTCTCTGCCCGCATCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000455125.1
ENST00000470642.1
CDS-3UTR CAA 90 bp GGGAAGGAAGAAGGGAGCTGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGTGGGGCAGTCGGCCTTaGCCCTCCTCCTCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: GKEEGSCWSLLTASSHLLWGSRP*PSSSRE
Trigger: CTCCCGGGAGGAGGAGGGCAAAGGCCGACTGCCCCA...CAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS-3UTR CAA 90 bp GCTGGCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGGCTCCTCGATGGAAGGCCCAGCAGTaGCCTGGGTGCACATCTGGC +
Preference number: 5 (lower is better)
Translates to: AGHGRMPAPWHVLAAAPRWKAQQ*PGCTSG
Trigger: GCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCA...TCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CAA 90 bp AGAGCGCAAAACAAACCCTGGCTGCCTCGGGATGGAGCGGGGCGGCCTCACCACGACCACGGCGAAGCCTaGTGGCCCCTGGAAGGCCCA +
Preference number: 5 (lower is better)
Translates to: RAQNKPWLPRDGAGRPHHDHGEA*WPLEGP
Trigger: TGGGCCTTCCAGGGGCCACAAGGCTTCGCCGTGGTC...GTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS CCA 90 bp AGAGTAAGGAGCCCGCCCGTGAGACGGCGCTTCGGAGCCGCGAGCTaGAACTCTGCTGGTCCACATCCGAGTAGCCTGCGGGGAACGAGG +
Preference number: 5 (lower is better)
Translates to: RVRSPPVRRRFGAAS*NSAGPHPSSLRGTR
Trigger: CCTCGTTCCCCGCAGGCTACTCGGATGTGGACCAGCAGAGTTCCAGCTCGCGGCTCCGAAGCGCCGTCTCACGGGCGGGCTCCTTACTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405018.5
CDS-3UTR CAA 90 bp AGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTCTGCCCGGGGCCGGGTaGGGGCAGTCGGCCTTTGCC +
Preference number: 5 (lower is better)
Translates to: RRPCPSFSSAWGHRLLSCLPGAG*GQSAFA
Trigger: GGCAAAGGCCGACTGCCCCAACCCGGCCCCGGGCAG...ACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS-3UTR CAA 90 bp TCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCTGGAAGGCCCAGCAGTaGCCTGGGTGCACATCTGGC +
Preference number: 5 (lower is better)
Translates to: SERRASVWGKRRGAVHPLWKAQQ*PGCTSG
Trigger: GCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCA...GAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp CCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGTCCTTTTCGACCACGGCGAAGCCTaGTGGCCCCTGGAAGGCCCA +
Preference number: 5 (lower is better)
Translates to: PANRLEPPAAQETLPVLFDHGEA*WPLEGP
Trigger: TGGGCCTTCCAGGGGCCACAAGGCTTCGCCGTGGTC...GAAAAGGACGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS GCA 90 bp GCTCAGGGAGGCCGCGGCTTCCCTGGCCGACTTGCCCTGCATCTCTaGCACATGGGTGAGGATCTTGCTCTCCAGCTCTCGCAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: AQGGRGFPGRLALHL*HMGEDLALQLSQLS
Trigger: GCTCAGCTGCGAGAGCTGGAGAGCAAGATCCTCACCCATGTGGCAGAGATGCAGGGCAAGTCGGCCAGGGAAGCCGCGGCCTCCCTGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000469086.5
ENST00000477262.5
CDS CCA 90 bp AGAGTAAGGAGCCCGCCCGTGAGACGGCGCTTCGGAGCCGCGAGCTaGAACTCTGCTGGTCCACATCCGAGTAGCCCCAGTTGGCGTCAC +
Preference number: 5 (lower is better)
Translates to: RVRSPPVRRRFGAAS*NSAGPHPSSPSWRH
Trigger: GTGACGCCAACTGGGGCTACTCGGATGTGGACCAGCAGAGTTCCAGCTCGCGGCTCCGAAGCGCCGTCTCACGGGCGGGCTCCTTACTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420859.5
ENST00000438058.5
CDS-3UTR CAA 90 bp GCCATGGTAGAATGCCCGCGCCCTGGCATGTGCTGGCGGCGGCTCCTCGAACGCCTGGAGATAGTGCTGTaGGGTGACAAGGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: AMVECPRPGMCWRRLLERLEIVL*GDKALG
Trigger: GCCCAAGGCCTTGTCACCCAACAGCACTATCTCCAG...GCGTTCGAGGAGCCGCCGCCAGCACATGCCAGGGCGCGGGCATTCTACCATGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CAA 90 bp AGCTGCAAGAGCCCAAGGGGGCAGCCTGAGCGGACGACCCCTACATCAGGGCCTGGGAAGCCTACAGGGTaGGCCCTGGGCCCCTTAGAA +
Preference number: 5 (lower is better)
Translates to: SCKSPRGQPERTTPTSGPGKPTG*ALGPLE
Trigger: TTCTAAGGGGCCCAGGGCCAACCCTGTAGGCTTCCC...AGGCCCTGATGTAGGGGTCGTCCGCTCAGGCTGCCCCCTTGGGCTCTTGCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS CCA 90 bp AGAGTAAGGAGCCCGCCCGTGAGACGGCGCTTCGGAGCCGCGAGCTaGAACTCTGCTGGTCCACATCCGAGTAGCCCACGTAGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: RVRSPPVRRRFGAAS*NSAGPHPSSPRSRP
Trigger: AGGACGACTACGTGGGCTACTCGGATGTGGACCAGCAGAGTTCCAGCTCGCGGCTCCGAAGCGCCGTCTCACGGGCGGGCTCCTTACTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405510.5
ENST00000406622.5
ENST00000456894.5
ENST00000480307.1
CDS CCA 90 bp GCTGTGGGAAAGGAGAGCAGGGCTTCCCTCTCTGAACCCCATGCCTaGCAGGGTAAGTGCCCAGGGAGCACCTGCTGCCTGGATGGGGAG +
Preference number: 5 (lower is better)
Translates to: AVGKESRASLSEPHA*QGKCPGSTCCLDGE
Trigger: CTCCCCATCCAGGCAGCAGGTGCTCCCTGGGCACTTACCCTGCCAGGCATGGGGTTCAGAGAGGGAAGCCCTGCTCTCCTTTCCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CAA 90 bp CTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTAAGTCCTCGGTGGCCTaGCGCCCCACAAGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LRRPCPSFSSAWGHRLLSKSSVA*RPTSPL
Trigger: CAGCGGGCTTGTGGGGCGCAAGGCCACCGAGGACTT...AGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp GGGAAGGAAGAAGGGAGCTGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGTGGAAGGCCCAGCAGTaGCCTGGGTGCACATCTGGC +
Preference number: 5 (lower is better)
Translates to: GKEEGSCWSLLTASSHLLWKAQQ*PGCTSG
Trigger: GCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCA...CAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS TCA 90 bp CTCGGGGTGACTGGGAGTGGTACCACAGGGGGATGCCGAAGAGGCTaGGGAGGGCCGTCTTGGTCTCGTAGGTCTCAGAACATCGGGTGC +
Preference number: 5 (lower is better)
Translates to: LGVTGSGTTGGCRRG*GGPSWSRRSQNIGC
Trigger: GCACCCGATGTTCTGAGACCTACGAGACCAAGACGGCCCTCCTCAGCCTCTTCGGCATCCCCCTGTGGTACCACTCCCAGTCACCCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000455125.1
ENST00000470642.1
CDS GCA 90 bp GGGGCACTGGAGATAGTGCTGTTGGGTGACAAGGCCTTGGGCACATaGTCTAAGGTAACGGCTGTGGGGCGGATGCGGGCAGAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: GALEIVLLGDKALGT*SKVTAVGRMRAERR
Trigger: CCGCCTCTCTGCCCGCATCCGCCCCACAGCCGTTACCTTAGAGCATGTGCCCAAGGCCTTGTCACCCAACAGCACTATCTCCAGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000455125.1
ENST00000470642.1
CDS-3UTR CAA 90 bp TGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGCTGGAGATAGTGCTGTaGGGTGACAAGGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: CAPRSQSAEQACGGSGGVLEIVL*GDKALG
Trigger: GCCCAAGGCCTTGTCACCCAACAGCACTATCTCCAG...CACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp CTGCCTCGGGATGGAGCGGGGCGGCCTCACCACCACTGCATCCAGCCTCATGCTAAGATGGCGAAGTCCTaGGGGGCACTGGAGATAGTG +
Preference number: 5 (lower is better)
Translates to: LPRDGAGRPHHHCIQPHAKMAKS*GALEIV
Trigger: CACTATCTCCAGTGCCCCCAAGGACTTCGCCATCTT...AGCATGAGGCTGGATGCAGTGGTGGTGAGGCCGCCCCGCTCCATCCCGAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CAA 90 bp TGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGGAGACCCTGCCCGAAGATGGCGAAGTCCTaGGGGGCACTGGAGATAGTG +
Preference number: 5 (lower is better)
Translates to: CWSLLTASSHLLLRRPCPKMAKS*GALEIV
Trigger: CACTATCTCCAGTGCCCCCAAGGACTTCGCCATCTT...CGGGCAGGGTCTCCTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp CTGCTCAGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCGGGAAGCCTACAGGGTaGGCCCTGGGCCCCTTAGAA +
Preference number: 5 (lower is better)
Translates to: LLRRPCPSFSSAWGHRLLGKPTG*ALGPLE
Trigger: TTCTAAGGGGCCCAGGGCCAACCCTGTAGGCTTCCC...GAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCTGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CAA 90 bp TGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGGAACCCCCGCCAGGGTaGTCAAGGAGCGAAACAAGA +
Preference number: 5 (lower is better)
Translates to: CAPRSQSAEQACGGSGGVEPPPG*SRSETR
Trigger: TCTTGTTTCGCTCCTTGACAACCCTGGCGGGGGTTC...CACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406622.5
CDS GCA 90 bp GCCCCTTGCCGCAGCTCCAGACGTTCCAGCCGCATGGCCTCCTTCTaGCAGTTGGAGGAAAATTCAGCAGCAAGAGCTTCCAGACGCCGC +
Preference number: 5 (lower is better)
Translates to: APCRSSRRSSRMASF*QLEENSAARASRRR
Trigger: GCGGCGTCTGGAAGCTCTTGCTGCTGAATTTTCCTCCAACTGGCAGAAGGAGGCCATGCGGCTGGAACGTCTGGAGCTGCGGCAAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000464202.1
CDS GCA 90 bp TCGGAGCCGCGAGCTGGAACTCTGCTGGTCCACATCCGAGTAGCCTaGGGGGAACGAGGACACTGGCTCAGTCTCTGTCACTTTCGAGCC +
Preference number: 5 (lower is better)
Translates to: SEPRAGTLLVHIRVA*GERGHWLSLCHFRA
Trigger: GGCTCGAAAGTGACAGAGACTGAGCCAGTGTCCTCGTTCCCCGCAGGCTACTCGGATGTGGACCAGCAGAGTTCCAGCTCGCGGCTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405018.5
CDS GCA 90 bp TCTGAACCCCATGCCTGGCAGGGTAAGTGCCCAGGGAGCACCTGCTaGCTGGATGGGGAGTCTGCGCCACTTCTGCTAGCACAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: SEPHAWQGKCPGSTC*LDGESAPLLLAQQH
Trigger: ATGCTGCTGTGCTAGCAGAAGTGGCGCAGACTCCCCATCCAGGCAGCAGGTGCTCCCTGGGCACTTACCCTGCCAGGCATGGGGTTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS CCA 90 bp CCTCACCCCAGTTGGCGTCACCATGCAGTTCCTCCAGGGAGCTCCTaGGTGGGAACCAGGACTCGTGGACCAGCGACTCACTGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: PHPSWRHHAVPPGSS*VGTRTRGPATHCSR
Trigger: CCTACTACAGTGAGTCGCTGGTCCACGAGTCCTGGTTCCCACCCAGGAGCTCCCTGGAGGAACTGCATGGTGACGCCAACTGGGGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000433561.5
ENST00000439339.1
ENST00000452294.5
ENST00000456894.5
ENST00000480307.1
CDS CCA 90 bp GCCCCAGTTGGCGTCACCATGCAGTTCCTCCAGGGAGCTCCTGGGTaGGAACCAGGACTCGTGGACCAGCGACTCACTGTAGTAGGAGGT +
Preference number: 5 (lower is better)
Translates to: APVGVTMQFLQGAPG*EPGLVDQRLTVVGG
Trigger: ACCTCCTACTACAGTGAGTCGCTGGTCCACGAGTCCTGGTTCCCACCCAGGAGCTCCCTGGAGGAACTGCATGGTGACGCCAACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420859.5
ENST00000438058.5
CDS CCA 90 bp TGGGGTCCCAGTTGGCGTCACCATGCAGTTCCTCCAGGGAGCTCCTaGGTGGGAACCAGGACTCGTGGACCAGCGACTCACTGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: WGPSWRHHAVPPGSS*VGTRTRGPATHCSR
Trigger: CCTACTACAGTGAGTCGCTGGTCCACGAGTCCTGGTTCCCACCCAGGAGCTCCCTGGAGGAACTGCATGGTGACGCCAACTGGGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417332.5
CDS-3UTR CAA 90 bp GGAAGAAGGGAGCTGCTGGAGCCTGCTAACCGCCTCGAGCCACCTGCTGCTCAGCTGGAGATAGTGCTGTaGGGTGACAAGGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GRRELLEPANRLEPPAAQLEIVL*GDKALG
Trigger: GCCCAAGGCCTTGTCACCCAACAGCACTATCTCCAG...CTGAGCAGCAGGTGGCTCGAGGCGGTTAGCAGGCTCCAGCAGCTCCCTTCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS GCA 90 bp CTGGGTCATGCATCTGCTTGGCAAGATGATCAGAACTCTCTGCTCTaGGGCTCTGCTCCCCAGTCCTGCCTGGAGAGTGGGTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LGHASAWQDDQNSLL*GSAPQSCLESGWGW
Trigger: CCAGCCCCACCCACTCTCCAGGCAGGACTGGGGAGCAGAGCCGCAGAGCAGAGAGTTCTGATCATCTTGCCAAGCAGATGCATGACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477262.5
CDS CCA 90 bp ACCCCAGTTGGCGTCACCATGCAGTTCCTCCAGGGAGCTCCTGGGTaGGAACCAGGACTCGTGGACCAGCGACTCACTGTAGTAGGAGGT +
Preference number: 5 (lower is better)
Translates to: TPVGVTMQFLQGAPG*EPGLVDQRLTVVGG
Trigger: ACCTCCTACTACAGTGAGTCGCTGGTCCACGAGTCCTGGTTCCCACCCAGGAGCTCCCTGGAGGAACTGCATGGTGACGCCAACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000433561.5
ENST00000439339.1
ENST00000452294.5
ENST00000456894.5
ENST00000480307.1
ENST00000494273.1
CDS CCA 90 bp CCTGGCCAGGAGCCCCTTGCCGCAGCTCCAGACGTTCCAGCCGCATaGCCTCCTTCTGCCAGTTGGAGGAAAATTCAGCAGCAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: PGQEPLAAAPDVPAA*PPSASWRKIQQQEL
Trigger: AAGCTCTTGCTGCTGAATTTTCCTCCAACTGGCAGAAGGAGGCCATGCGGCTGGAACGTCTGGAGCTGCGGCAAGGGGCTCCTGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000464202.1
CDS CCA 90 bp GCCAGCTGGTCCTCCAGCCGCCTCAGCTCCTTCACAGAGCTCTCCTaGAAGGACTCCTGGGTCATGCTTTGCCACTCTGACTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ASWSSSRLSSFTELS*KDSWVMLCHSDFSC
Trigger: GCAGCTGAAGTCAGAGTGGCAAAGCATGACCCAGGAGTCCTTCCAGGAGAGCTCTGTGAAGGAGCTGAGGCGGCTGGAGGACCAGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000464202.1
CDS CCA 90 bp AGTAGCCCCAGTTGGCGTCACCATGCAGTTCCTCCAGGGAGCTCCTaGGTGGGAACCAGGACTCGTGGACCAGCGACTCACTGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: SSPSWRHHAVPPGSS*VGTRTRGPATHCSR
Trigger: CCTACTACAGTGAGTCGCTGGTCCACGAGTCCTGGTTCCCACCCAGGAGCTCCCTGGAGGAACTGCATGGTGACGCCAACTGGGGCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420859.5
ENST00000438058.5
CDS CCA 90 bp GTCCCAGTTGGCGTCACCATGCAGTTCCTCCAGGGAGCTCCTGGGTaGGAACCAGGACTCGTGGACCAGCGACTCACTGTAGTAGGAGGT +
Preference number: 5 (lower is better)
Translates to: VPVGVTMQFLQGAPG*EPGLVDQRLTVVGG
Trigger: ACCTCCTACTACAGTGAGTCGCTGGTCCACGAGTCCTGGTTCCCACCCAGGAGCTCCCTGGAGGAACTGCATGGTGACGCCAACTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417332.5
CDS CCA 90 bp ACTCACCCCAGTTGGCGTCACCATGCAGTTCCTCCAGGGAGCTCCTaGGTGGGAACCAGGACTCGTGGACCAGCGACTCACTGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: THPSWRHHAVPPGSS*VGTRTRGPATHCSR
Trigger: CCTACTACAGTGAGTCGCTGGTCCACGAGTCCTGGTTCCCACCCAGGAGCTCCCTGGAGGAACTGCATGGTGACGCCAACTGGGGTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494273.1
CDS-3UTR CAA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGAGGTCCTCACCCCAGTaGGCGTCACCATGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGRSSPQ*ASPCSS
Trigger: GGAACTGCATGGTGACGCCAACTGGGGTGAGGACCT...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp AGCTGCAAGAGCCCAAGGGGGCAGCCTGAGCGGACGACCCCTACATCAGGGCCTGCCCGGACGATCTTCTaGAAGAGGTCTTCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: SCKSPRGQPERTTPTSGPARTIF*KRSSES
Trigger: AGACTCAGAAGACCTCTTCAAGAAGATCGTCCGGGC...AGGCCCTGATGTAGGGGTCGTCCGCTCAGGCTGCCCCCTTGGGCTCTTGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CAA 90 bp AAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCCCAGATGGCTGGCATTGGGTGACAAGGCCTaGGGCACATGCTCTAAGGTA +
Preference number: 5 (lower is better)
Translates to: KRVGEAAGCCSPTPRWLALGDKA*GTCSKV
Trigger: TACCTTAGAGCATGTGCCCAAGGCCTTGTCACCCAA...TGCCAGCCATCTGGGAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp TCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGGGGTGCTGTTCACCCACTCGACAAATACACACTTTaGTCGAAGGCCCTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SERRASVWGKRRGAVHPLDKYTL*SKALRD
Trigger: GTCCCTGAGGGCCTTCGACAAAAGTGTGTATTTGTC...GAGTGGGTGAACAGCACCCCGCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CAA 90 bp CCTGACCCCAGCCAAGACCAGTCAGGTCCTACCTCTCCCAACTTCCCAGTCCCCGAAGAGAATCCTGGCTaGGCGCCTGCCACCTGTATC +
Preference number: 5 (lower is better)
Translates to: PDPSQDQSGPTSPNFPVPEENPG*APATCI
Trigger: GATACAGGTGGCAGGCGCCAAGCCAGGATTCTCTTC...GGGGACTGGGAAGTTGGGAGAGGTAGGACCTGACTGGTCTTGGCTGGGGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406622.5
CDS GCA 90 bp AAGATGAAAGAGGACCCCCTAGTGGGCTCCCGTCAGGAGAGCGGGTaGCCAGCACTCATTGTGAACCTGAGAAGGGGCAAGGCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: KMKEDPLVGSRQESG*PALIVNLRRGKASP
Trigger: AGGAGAGGCCTTGCCCCTTCTCAGGTTCACAATGAGTGCTGGGCACCCGCTCTCCTGACGGGAGCCCACTAGGGGGTCCTCTTTCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469086.5
CDS GCA 90 bp GACTCCTGGGTCATGCATCTGCTTGGCAAGATGATCAGAACTCTCTaGTCTGCGGCTCTGCTCCCCAGTCCTGCCTGGAGAGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: DSWVMHLLGKMIRTL*SAALLPSPAWRVGG
Trigger: CCCACCCACTCTCCAGGCAGGACTGGGGAGCAGAGCCGCAGAGCAGAGAGTTCTGATCATCTTGCCAAGCAGATGCATGACCCAGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477262.5
CDS-3UTR CAA 90 bp GGAGAGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCCCATCCTCTGGAGATAGTGCTGTaGGGTGACAAGGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GELGSSPSSASCLGKSHPLEIVL*GDKALG
Trigger: GCCCAAGGCCTTGTCACCCAACAGCACTATCTCCAG...AGGATGGGACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS CCA 90 bp AGAAGCGCCTGGTTAAAACGAAGACGTCAAGGAGGGAGGCAGCTGTaGTCAGGCGGTACCAGGTGGTGCCAGCCCACCAGTAGAGAAGTC +
Preference number: 5 (lower is better)
Translates to: RSAWLKRRRQGGRQL*SGGTRWCQPTSREV
Trigger: GACTTCTCTACTGGTGGGCTGGCACCACCTGGTACCGCCTGACCACAGCTGCCTCCCTCCTTGACGTCTTCGTTTTAACCAGGCGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000430185.5
ENST00000438058.5
ENST00000456894.5
CDS CCA 90 bp GCCAGCTGGTCCTCCAGCCGCCTCAGCTCCTTCACAGAGCTCTCCTaGAAGGACTCCTGGGTCATGCATCTGCTTGGCAAGATGATCAGA +
Preference number: 5 (lower is better)
Translates to: ASWSSSRLSSFTELS*KDSWVMHLLGKMIR
Trigger: TCTGATCATCTTGCCAAGCAGATGCATGACCCAGGAGTCCTTCCAGGAGAGCTCTGTGAAGGAGCTGAGGCGGCTGGAGGACCAGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477262.5
CDS-3UTR CAA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGCTCTCGCAGCTGAGCTaGCATCTCCTCTCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGLSQLS*HLLSLK
Trigger: CTTCAGAGAGAGGAGATGCAAGCTCAGCTGCGAGAG...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp TTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGTGGAAGGCCCAGCAGTaGCCTGGGTGCACATCTGGC +
Preference number: 5 (lower is better)
Translates to: FHLHGATGSSLVLLEVRAWKAQQ*PGCTSG
Trigger: GCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCA...CGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGAAGATGGCGAAGTCCTaGGGGGCACTGGAGATAGTG +
Preference number: 5 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGKMAKS*GALEIV
Trigger: CACTATCTCCAGTGCCCCCAAGGACTTCGCCATCTT...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp TTTAAGCCGCATGCACTGCCTGAGGCTCCAGCTGGCCATGGTAGAATGCCCGCGAAGATGGCGAAGTCCTaGGGGGCACTGGAGATAGTG +
Preference number: 5 (lower is better)
Translates to: FKPHALPEAPAGHGRMPAKMAKS*GALEIV
Trigger: CACTATCTCCAGTGCCCCCAAGGACTTCGCCATCTT...CGCGGGCATTCTACCATGGCCAGCTGGAGCCTCAGGCAGTGCATGCGGCTTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS-3UTR CAA 90 bp GCCACCCAACCCCTCTTGTGTAAAGCCCACCTCCTGGTGTCCTTTTCCAGGAAGGCCACCCAACCCCTCTaGTGTAAAGCCCACCTCCTG +
Preference number: 5 (lower is better)
Translates to: ATQPLLCKAHLLVSFSRKATQPL*CKAHLL
Trigger: CAGGAGGTGGGCTTTACACAAGAGGGGTTGGGTGGC...CTTCCTGGAAAAGGACACCAGGAGGTGGGCTTTACACAAGAGGGGTTGGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS TCA 90 bp GGTTGCCTTGGTTCTCTCTTGAAACCCTGCCTGGAAATGTGGCGATaGGTCTCTGGCTTCCCAGCCCTCATCCGGCCTCCTGCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: GCLGSLLKPCLEMWR*VSGFPALIRPPAVL
Trigger: AAGGACAGCAGGAGGCCGGATGAGGGCTGGGAAGCCAGAGACTCATCGCCACATTTCCAGGCAGGGTTTCAAGAGAGAACCAAGGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430185.5
CDS CCA 90 bp CTCACTGTAGTAGGAGGTGTGTGCATCAGAGGACGGGCCCAGCTGTaGCGCTGGGGACAGGCGCTTCATGTTGCTGGATTTCCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: LTVVGGVCIRGRAQL*RWGQALHVAGFPLQ
Trigger: TTGAAGAGGAAATCCAGCAACATGAAGCGCCTGTCCCCAGCGCCACAGCTGGGCCCGTCCTCTGATGCACACACCTCCTACTACAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000417332.5
ENST00000420859.5
ENST00000433561.5
ENST00000438058.5
ENST00000439339.1
ENST00000452294.5
ENST00000456894.5
ENST00000480307.1
ENST00000494273.1
CDS-3UTR CAA 90 bp CTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGGAAGCGGCGACAGGCGCTTCATGTaGCTGGATTTCCTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: LSCAPRSQSAEQACGGSGDRRFM*LDFLFK
Trigger: CTTGAAGAGGAAATCCAGCAACATGAAGCGCCTGTC...GCCGCTTCCCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp AGGAGACCCTGCCCGTCCTTTTCATCTGCATGGGGCCACAGGCTCCTCTCTTGTCTCTCGCAGCTGAGCTaGCATCTCCTCTCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: RRPCPSFSSAWGHRLLSCLSQLS*HLLSLK
Trigger: CTTCAGAGAGAGGAGATGCAAGCTCAGCTGCGAGAG...ACAAGAGAGGAGCCTGTGGCCCCATGCAGATGAAAAGGACGGGCAGGGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp GGGAGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCCTCTCGCAGCTGAGCTaGCATCTCCTCTCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: GSRVGPNLASGERKATTVLSQLS*HLLSLK
Trigger: CTTCAGAGAGAGGAGATGCAAGCTCAGCTGCGAGAG...GACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CAA 90 bp ACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGCGTGTGGGGTTGGGTGACAAGGCCTaGGGCACATGCTCTAAGGTA +
Preference number: 5 (lower is better)
Translates to: TGSSLVLLEVRAPSKRVGLGDKA*GTCSKV
Trigger: TACCTTAGAGCATGTGCCCAAGGCCTTGTCACCCAA...CCCCACACGCTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS TCA 90 bp CTCGGACTCCTGGGAGGCCCGGACGATCTTCTTGAAGAGGTCTTCTaGGTCTTGCTGATGCTCTGCTCTCAGGGCAGACAGTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: LGLLGGPDDLLEEVF*VLLMLCSQGRQFFL
Trigger: CAGGAAGAACTGTCTGCCCTGAGAGCAGAGCATCAGCAAGACTCAGAAGACCTCTTCAAGAAGATCGTCCGGGCCTCCCAGGAGTCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000464202.1
ENST00000469086.5
ENST00000477262.5
CDS TCA 90 bp ATACCCAAGCTGCCGCTGGGAAGAACTAAATATTCTGATGGAGGTTaGGCGGGGAGTGCTGAAAACTGTCAGCACCCGCCTCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: IPKLPLGRTKYSDGG*AGSAENCQHPPPPS
Trigger: GGAGGGCGGAGGCGGGTGCTGACAGTTTTCAGCACTCCCCGCTCAACCTCCATCAGAATATTTAGTTCTTCCCAGCGGCAGCTTGGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456894.5
CDS GCA 90 bp GAAAACTGTCAGCACCCGCCTCCGCCCTCCCAGAACTCCCAGAGATaGCTCTCAGTCTTTCCTGCGGCATCCTGGCATCACAAAACAGTT +
Preference number: 5 (lower is better)
Translates to: ENCQHPPPPSQNSQR*LSVFPAASWHHKTV
Trigger: AACTGTTTTGTGATGCCAGGATGCCGCAGGAAAGACTGAGAGGCATCTCTGGGAGTTCTGGGAGGGCGGAGGCGGGTGCTGACAGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456894.5
CDS CCA 90 bp ACTCTGCTGGTCCACATCCGAGTAGCCTGCGGGGAACGAGGACACTaGCTCAGTCTCTGTCACTTTCGAGCCTCTTCCTTCACTGTCTTC +
Preference number: 5 (lower is better)
Translates to: TLLVHIRVACGERGH*LSLCHFRASSFTVF
Trigger: GAAGACAGTGAAGGAAGAGGCTCGAAAGTGACAGAGACTGAGCCAGTGTCCTCGTTCCCCGCAGGCTACTCGGATGTGGACCAGCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405018.5
CDS-3UTR CAA 90 bp CATGGGGCCACAGGCTCCTCTCTTGTGCTCCTAGAAGTCAGAGCGCCGAGCAAGGACAGGCGCTTCATGTaGCTGGATTTCCTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: HGATGSSLVLLEVRAPSKDRRFM*LDFLFK
Trigger: CTTGAAGAGGAAATCCAGCAACATGAAGCGCCTGTC...CTTGCTCGGCGCTCTGACTTCTAGGAGCACAAGAGAGGAGCCTGTGGCCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGAGGTCCTCACCCCAGTaGGCGTCACCATGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGRSSPQ*ASPCSS
Trigger: GGAACTGCATGGTGACGCCAACTGGGGTGAGGACCT...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CAA 90 bp CTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGATAAGTCCTCGGTGGCCTaGCGCCCCACAAGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LPTSQSPMICYIYTHSQDKSSVA*RPTSPL
Trigger: CAGCGGGCTTGTGGGGCGCAAGGCCACCGAGGACTT...ATCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp CTACCTCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCGACCACGGCGAAGCCTaGTGGCCCCTGGAAGGCCCA +
Preference number: 5 (lower is better)
Translates to: LPLPTSQSPMICYIYTHSDHGEA*WPLEGP
Trigger: TGGGCCTTCCAGGGGCCACAAGGCTTCGCCGTGGTC...GGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGAGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp CCTTGTAGGAGAGCTGGGCAGCTCTCCATCAAGTGCTTCCTGCCTGGGGAAGTCTTGGGTGACAAGGCCTaGGGCACATGCTCTAAGGTA +
Preference number: 5 (lower is better)
Translates to: PCRRAGQLSIKCFLPGEVLGDKA*GTCSKV
Trigger: TACCTTAGAGCATGTGCCCAAGGCCTTGTCACCCAA...GACTTCCCCAGGCAGGAAGCACTTGATGGAGAGCTGCCCAGCTCTCCTACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CAA 90 bp GGATGCCCACTGAAGTTTAAGCCGCATGCACTGCCTGAGGCTCCAGCTGGCCATTTGGGTGACAAGGCCTaGGGCACATGCTCTAAGGTA +
Preference number: 5 (lower is better)
Translates to: GCPLKFKPHALPEAPAGHLGDKA*GTCSKV
Trigger: TACCTTAGAGCATGTGCCCAAGGCCTTGTCACCCAA...ATGGCCAGCTGGAGCCTCAGGCAGTGCATGCGGCTTAAACTTCAGTGGGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS TCA 90 bp TGGGAGGCCCGGACGATCTTCTTGAAGAGGTCTTCTGAGTCTTGCTaGTGCTCTGCTCTCAGGGCAGACAGTTCTTCCTGGATGCGAGCA +
Preference number: 5 (lower is better)
Translates to: WEARTIFLKRSSESC*CSALRADSSSWMRA
Trigger: TGCTCGCATCCAGGAAGAACTGTCTGCCCTGAGAGCAGAGCATCAGCAAGACTCAGAAGACCTCTTCAAGAAGATCGTCCGGGCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000464202.1
ENST00000469086.5
ENST00000477262.5
CDS-3UTR CAA 90 bp GGGAGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCGACAGGCGCTTCATGTaGCTGGATTTCCTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: GSRVGPNLASGERKATTVDRRFM*LDFLFK
Trigger: CTTGAAGAGGAAATCCAGCAACATGAAGCGCCTGTC...GACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CAA 90 bp GGGAGCAGGGTGGGCCCCAACCTAGCATCAGGAGAGAGAAAAGCAACTACCGTCGACAAATACACACTTTaGTCGAAGGCCCTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: GSRVGPNLASGERKATTVDKYTL*SKALRD
Trigger: GTCCCTGAGGGCCTTCGACAAAAGTGTGTATTTGTC...GACGGTAGTTGCTTTTCTCTCTCCTGATGCTAGGTTGGGGCCCACCCTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS TCA 90 bp AAGCTTCCCTCATGCTGCCCTTCTGGAAGGTGCCTTCCCCTGTGCTaGCGTCTGCAGGATGCGTGTTACACCCCATTTGGATATCACATC +
Preference number: 5 (lower is better)
Translates to: KLPSCCPSGRCLPLC*RLQDACYTPFGYHI
Trigger: GATGTGATATCCAAATGGGGTGTAACACGCATCCTGCAGACGTCAGCACAGGGGAAGGCACCTTCCAGAAGGGCAGCATGAGGGAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS CCA 90 bp GATGCTCAGAGCAGCTTTAAAGGTCAGCCTCTCCCTGGCCCAGGATaGTACTCGGTACGTCCTGACTTCCCTGAATTGCCACTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: DAQSSFKGQPLPGPG*YSVRPDFPELPLAF
Trigger: AAAGGCAAGTGGCAATTCAGGGAAGTCAGGACGTACCGAGTACCATCCTGGGCCAGGGAGAGGCTGACCTTTAAAGCTGCTCTGAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470642.1
CDS TCA 90 bp GACGTCTGCAGGATGCGTGTTACACCCCATTTGGATATCACATCTTaGGCTGTGGGAAAGGAGAGCAGGGCTTCCCTCTCTGAACCCCAT +
Preference number: 5 (lower is better)
Translates to: DVCRMRVTPHLDITS*AVGKESRASLSEPH
Trigger: ATGGGGTTCAGAGAGGGAAGCCCTGCTCTCCTTTCCCACAGCTCAAGATGTGATATCCAAATGGGGTGTAACACGCATCCTGCAGACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS GCA 90 bp TCCCTGGCCCAGGATGGTACTCGGTACGTCCTGACTTCCCTGAATTaGCACTTGCCTTTGTCATGGGTACTAGGTTGGGTGATTTCTGCT +
Preference number: 5 (lower is better)
Translates to: SLAQDGTRYVLTSLN*HLPLSWVLGWVISA
Trigger: AGCAGAAATCACCCAACCTAGTACCCATGACAAAGGCAAGTGGCAATTCAGGGAAGTCAGGACGTACCGAGTACCATCCTGGGCCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470642.1
CDS CCA 90 bp ACGGTGTGCTGGTTCTGGATCAAGGCCTCAAAGGTCTGGTTGCCTTaGTTCTCTCTTGAAACCCTGCCTGGAAATGTGGCGATGAGTCTC +
Preference number: 5 (lower is better)
Translates to: TVCWFWIKASKVWLP*FSLETLPGNVAMSL
Trigger: GAGACTCATCGCCACATTTCCAGGCAGGGTTTCAAGAGAGAACCAAGGCAACCAGACCTTTGAGGCCTTGATCCAGAACCAGCACACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430185.5
CDS-3UTR CAA 90 bp TCTCCCAACTTCCCAGTCCCCCATGATATGCTACATATATACACACTCCCAGGAAGGTCCTCACCCCAGTaGGCGTCACCATGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: SPNFPVPHDMLHIYTLPGRSSPQ*ASPCSS
Trigger: GGAACTGCATGGTGACGCCAACTGGGGTGAGGACCT...TCCTGGGAGTGTGTATATATGTAGCATATCATGGGGGACTGGGAAGTTGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS-3UTR CAA 90 bp AATAGTGCAGCATTTGTGACAGGAGAGCGCAAAACAAACCCTGGCTGCCTCGGGGCCCGGACGATCTTCTaGAAGAGGTCTTCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: NSAAFVTGERKTNPGCLGARTIF*KRSSES
Trigger: AGACTCAGAAGACCTCTTCAAGAAGATCGTCCGGGC...CCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATGCTGCACTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405018.5
ENST00000405510.5
CDS-3UTR CAA 90 bp TACATATATACACACTCCCAGGATGGGAAGCAGACGCCACGGGCACAGAGGGAAGCCCGGACGATCTTCTaGAAGAGGTCTTCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: YIYTHSQDGKQTPRAQREARTIF*KRSSES
Trigger: AGACTCAGAAGACCTCTTCAAGAAGATCGTCCGGGC...TTCCCTCTGTGCCCGTGGCGTCTGCTTCCCATCCTGGGAGTGTGTATATATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS GCA 72 bp GGCGCTGCCCGGGGCCGGGTTGGGGCAGTCGGCCTTTaGCCTCCTCCTCCCGGGAGGCTGCCCGGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: GAARGRVGAVGL*PPPPGRLPGKS
Trigger: GGACTTCCCGGGCAGCCTCCCGGGAGGAGGAGGGCAAAGGCCGACTGCCCCAACCCGGCCCCGGGCAGCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS GCA 72 bp CGGTGGCCTTGCGCCCCACAAGCCCGCTGGCCCTGCTaGTCTCTGAGCCACCCGTGCCTCTCCTCCTCCGCA +
Preference number: 6 (lower is better)
Translates to: RWPCAPQARWPC*SLSHPCLSSSA
Trigger: TGCGGAGGAGGAGAGGCACGGGTGGCTCAGAGAGCAGCAGGGCCAGCGGGCTTGTGGGGCGCAAGGCCACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000452294.5
ENST00000456894.5
ENST00000480307.1
ENST00000494273.1
CDS CCA 72 bp TGGCACAAAACCCGTAGGCGCTGCCCGGGGCCGGGTTaGGGCAGTCGGCCTTTGCCCTCCTCCTCCCGGGAG +
Preference number: 6 (lower is better)
Translates to: WHKTRRRCPGPG*GSRPLPSSSRE
Trigger: CTCCCGGGAGGAGGAGGGCAAAGGCCGACTGCCCCAACCCGGCCCCGGGCAGCGCCTACGGGTTTTGTGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS CAA 90 bp AGGCAGGGTGGGCTCCCGCACGGGAGGAGGGCCCCGCTCAGGCCATaGGCTGTCTCCTCGCTGAAGGTGGACGGCAGATGCCCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: RQGGLPHGRRAPLRP*AVSSLKVDGRCPRP
Trigger: AGGCCTGGGGCATCTGCCGTCCACCTTCAGCGAGGAGACAGCCAATGGCCTGAGCGGGGCCCTCCTCCCGTGCGGGAGCCCACCCTGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470642.1
CDS GCA 72 bp ACCGAGCTCTGCTTCAGTGCCAGAGCCGCCAGCTCCTaGTGCAGGCCGGCCAGCTGGTCCTCCAGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: TELCFSARAASS*CRPASWSSSRL
Trigger: GAGGCGGCTGGAGGACCAGCTGGCCGGCCTGCAGCAGGAGCTGGCGGCTCTGGCACTGAAGCAGAGCTCGGT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000464202.1
ENST00000469086.5
ENST00000477262.5
CDS CAA 72 bp GCGGATGCGGGCAGAGAGGCGGACCACGGCGAAGCCTaGTGGCCCCTGGAAGGCCCAGCAGTTGCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: ADAGREADHGEA*WPLEGPAVAWV
Trigger: CACCCAGGCAACTGCTGGGCCTTCCAGGGGCCACAAGGCTTCGCCGTGGTCCGCCTCTCTGCCCGCATCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000455125.1
ENST00000470642.1
CDS CAA 72 bp GGGCTCCCGCACGGGAGGAGGGCCCCGCTCAGGCCATaGGCTGTCTCCTCGCTGAAGGTGGACGGCAGATGC +
Preference number: 6 (lower is better)
Translates to: GLPHGRRAPLRP*AVSSLKVDGRC
Trigger: GCATCTGCCGTCCACCTTCAGCGAGGAGACAGCCAATGGCCTGAGCGGGGCCCTCCTCCCGTGCGGGAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470642.1
CDS CAA 90 bp GGCTGTGGGGCGGATGCGGGCAGAGAGGCGGACCACGGCGAAGCCTaGTGGCCCCTGGAAGGCCCAGCAGTTGCCTGGGTGCACATCTGG +
Preference number: 6 (lower is better)
Translates to: GCGADAGREADHGEA*WPLEGPAVAWVHIW
Trigger: CCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCAGGGGCCACAAGGCTTCGCCGTGGTCCGCCTCTCTGCCCGCATCCGCCCCACAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000455125.1
ENST00000470642.1
CDS GCA 72 bp CAGGCCCACTTCTTCCGCCACCGAGCTCTGCTTCAGTaGCAGAGCCGCCAGCTCCTGCTGCAGGCCGGCCAG +
Preference number: 6 (lower is better)
Translates to: QAHFFRHRALLQ*QSRQLLLQAGQ
Trigger: CTGGCCGGCCTGCAGCAGGAGCTGGCGGCTCTGGCACTGAAGCAGAGCTCGGTGGCGGAAGAAGTGGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000464202.1
ENST00000469086.5
ENST00000477262.5
CDS CCA 72 bp GATGCGGGCAGAGAGGCGGACCACGGCGAAGCCTTGTaGCCCCTGGAAGGCCCAGCAGTTGCCTGGGTGCAC +
Preference number: 6 (lower is better)
Translates to: DAGREADHGEAL*PLEGPAVAWVH
Trigger: GTGCACCCAGGCAACTGCTGGGCCTTCCAGGGGCCACAAGGCTTCGCCGTGGTCCGCCTCTCTGCCCGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000455125.1
ENST00000470642.1
CDS CCA 72 bp AGCCCGCCCGTGAGACGGCGCTTCGGAGCCGCGAGCTaGAACTCTGCTGGTCCACATCCGAGTAGCCTGCGG +
Preference number: 6 (lower is better)
Translates to: SPPVRRRFGAAS*NSAGPHPSSLR
Trigger: CCGCAGGCTACTCGGATGTGGACCAGCAGAGTTCCAGCTCGCGGCTCCGAAGCGCCGTCTCACGGGCGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405018.5
CDS GCA 72 bp GGGTGCTCTGACTCCCAGCCACCGAGCTCCCTCCGCTaGTGCTGCTGCCGTCATCGTCACCCTGGGAGTAGC +
Preference number: 6 (lower is better)
Translates to: GCSDSQPPSSLR*CCCRHRHPGSS
Trigger: GCTACTCCCAGGGTGACGATGACGGCAGCAGCAGCAGCGGAGGGAGCTCGGTGGCTGGGAGTCAGAGCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000417332.5
ENST00000420859.5
ENST00000433561.5
ENST00000438058.5
ENST00000439339.1
ENST00000452294.5
ENST00000456894.5
ENST00000494273.1
CDS CCA 72 bp AGGCTGGGAACTGCCTGTCCCTGGAAACGGCCTGTCTaGCACAAAACCCGTAGGCGCTGCCCGGGGCCGGGT +
Preference number: 6 (lower is better)
Translates to: RLGTACPWKRPV*HKTRRRCPGPG
Trigger: ACCCGGCCCCGGGCAGCGCCTACGGGTTTTGTGCCAGACAGGCCGTTTCCAGGGACAGGCAGTTCCCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405510.5
CDS CCA 72 bp AGCCCGCCCGTGAGACGGCGCTTCGGAGCCGCGAGCTaGAACTCTGCTGGTCCACATCCGAGTAGCCCACGT +
Preference number: 6 (lower is better)
Translates to: SPPVRRRFGAAS*NSAGPHPSSPR
Trigger: ACGTGGGCTACTCGGATGTGGACCAGCAGAGTTCCAGCTCGCGGCTCCGAAGCGCCGTCTCACGGGCGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405510.5
ENST00000406622.5
ENST00000456894.5
ENST00000480307.1
CDS CCA 72 bp GCAGAGAGGCGGACCACGGCGAAGCCTTGTGGCCCCTaGAAGGCCCAGCAGTTGCCTGGGTGCACATCTGGC +
Preference number: 6 (lower is better)
Translates to: AERRTTAKPCGP*KAQQLPGCTSG
Trigger: GCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCAGGGGCCACAAGGCTTCGCCGTGGTCCGCCTCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000455125.1
ENST00000470642.1
CDS CCA 72 bp AGCCCGCCCGTGAGACGGCGCTTCGGAGCCGCGAGCTaGAACTCTGCTGGTCCACATCCGAGTAGCCCCAGT +
Preference number: 6 (lower is better)
Translates to: SPPVRRRFGAAS*NSAGPHPSSPS
Trigger: ACTGGGGCTACTCGGATGTGGACCAGCAGAGTTCCAGCTCGCGGCTCCGAAGCGCCGTCTCACGGGCGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420859.5
ENST00000438058.5
CDS TCA 72 bp CCACGCGGCCCCCTCCACCTCGGGCAAGGAACTGACTaGTCCAGGCCGGGAACTGAGATTCCACGTCGTCCC +
Preference number: 6 (lower is better)
Translates to: PRGPLHLGQGTD*SRPGTEIPRRP
Trigger: GGGACGACGTGGAATCTCAGTTCCCGGCCTGGATCAGTCAGTTCCTTGCCCGAGGTGGAGGGGGCCGCGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000469086.5
ENST00000477262.5
CDS GCA 72 bp CGCACCCGCAGGTCCTCACCCCAGTTGGCGTCACCATaGAGTTCCTCCAGGGAGCTCCTGGGTGGGAACCAG +
Preference number: 6 (lower is better)
Translates to: RTRRSSPQLASP*SSSRELLGGNQ
Trigger: CTGGTTCCCACCCAGGAGCTCCCTGGAGGAACTGCATGGTGACGCCAACTGGGGTGAGGACCTGCGGGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000433561.5
ENST00000452294.5
ENST00000456894.5
ENST00000480307.1
CDS GCA 72 bp CCCCTCCTGACTCCAGGGCGTAGTCTGCCAGCCCGATaGGGTCCTCACTGTAGCGCTGCAGGGCCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: PLLTPGRSLPAR*GPHCSAAGPAS
Trigger: TGAAGCAGGCCCTGCAGCGCTACAGTGAGGACCGCATCGGGCTGGCAGACTACGCCCTGGAGTCAGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000455125.1
ENST00000477262.5
CDS CCA 72 bp GGCGCCCAGTACCTTTGCCACTCTGACTTCAGCTGCTaGATGCGAGCCTCGGACTCCTGGGAGGCCCGGACG +
Preference number: 6 (lower is better)
Translates to: GAQYLCHSDFSC*MRASDSWEART
Trigger: CGTCCGGGCCTCCCAGGAGTCCGAGGCTCGCATCCAGCAGCTGAAGTCAGAGTGGCAAAGGTACTGGGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469086.5
ENST00000477262.5
CDS CCA 72 bp AAGCCCCGGGACGGAGGGCTCCACACTCACCCCAGTTaGCGTCACCATGCAGTTCCTCCAGGGAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: KPRDGGLHTHPS*RHHAVPPGSSW
Trigger: CCAGGAGCTCCCTGGAGGAACTGCATGGTGACGCCAACTGGGGTGAGTGTGGAGCCCTCCGTCCCGGGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494273.1
CDS TCA 72 bp GTAAGCAGGGCTAGTGGGCGGGCTCCCCATGCACTCTaGAGCGGTAGATGCAGGTGTACTCGGGGTGGCCCC +
Preference number: 6 (lower is better)
Translates to: VSRASGRAPHAL*SGRCRCTRGGP
Trigger: GGGGCCACCCCGAGTACACCTGCATCTACCGCTTCAGAGTGCATGGGGAGCCCGCCCACTAGCCCTGCTTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
CDS GCA 72 bp GGCCGCGGCTTCCCTGGCCGACTTGCCCTGCATCTCTaGCACATGGGTGAGGATCTTGCTCTCCAGCTCTCG +
Preference number: 6 (lower is better)
Translates to: GRGFPGRLALHL*HMGEDLALQLS
Trigger: CGAGAGCTGGAGAGCAAGATCCTCACCCATGTGGCAGAGATGCAGGGCAAGTCGGCCAGGGAAGCCGCGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000469086.5
ENST00000477262.5
CDS GCA 72 bp CTCAGGGAGGCCGCGGCTTCCCTGGCCGACTTGCCCTaGATCTCTGCCACATGGGTGAGGATCTTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: LREAAASLADLP*ISATWVRILLS
Trigger: GGAGAGCAAGATCCTCACCCATGTGGCAGAGATGCAGGGCAAGTCGGCCAGGGAAGCCGCGGCCTCCCTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000469086.5
ENST00000477262.5
CDS GCA 72 bp AGCAGGCCGAGGCCAGCTGGTGGCGCCCAGTACCTTTaGCACTCTGACTTCAGCTGCTGGATGCGAGCCTCG +
Preference number: 6 (lower is better)
Translates to: SRPRPAGGAQYL*HSDFSCWMRAS
Trigger: CGAGGCTCGCATCCAGCAGCTGAAGTCAGAGTGGCAAAGGTACTGGGCGCCACCAGCTGGCCTCGGCCTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469086.5
ENST00000477262.5
CDS GCA 72 bp CGGAGGGCTCCACACTCACCCCAGTTGGCGTCACCATaGAGTTCCTCCAGGGAGCTCCTGGGTGGGAACCAG +
Preference number: 6 (lower is better)
Translates to: RRAPHSPQLASP*SSSRELLGGNQ
Trigger: CTGGTTCCCACCCAGGAGCTCCCTGGAGGAACTGCATGGTGACGCCAACTGGGGTGAGTGTGGAGCCCTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494273.1
CDS CAA 72 bp AAAGCCCCGGGACGGAGGGCTCCACACTCACCCCAGTaGGCGTCACCATGCAGTTCCTCCAGGGAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: KAPGRRAPHSPQ*ASPCSSSRELL
Trigger: CAGGAGCTCCCTGGAGGAACTGCATGGTGACGCCAACTGGGGTGAGTGTGGAGCCCTCCGTCCCGGGGCTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494273.1
CDS TCA 72 bp CTGAGGAGGGAATCCCGGGGACTGCAGGGGACACTGTaGGGAGTATCTCGCGGGAGGCCGAGGAAGCAAAGC +
Preference number: 6 (lower is better)
Translates to: LRRESRGLQGTL*GVSRGRPRKQS
Trigger: GCTTTGCTTCCTCGGCCTCCCGCGAGATACTCCTCACAGTGTCCCCTGCAGTCCCCGGGATTCCCTCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494273.1
CDS GCA 72 bp CTCGTGGACCAGCGACTCACTGTAGTAGGAGGTGTGTaGATCAGAGGACGGGCCCAGCTGTGGCGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: LVDQRLTVVGGV*IRGRAQLWRWG
Trigger: TCCCCAGCGCCACAGCTGGGCCCGTCCTCTGATGCACACACCTCCTACTACAGTGAGTCGCTGGTCCACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000417332.5
ENST00000420859.5
ENST00000433561.5
ENST00000438058.5
ENST00000439339.1
ENST00000452294.5
ENST00000456894.5
ENST00000480307.1
ENST00000494273.1
CDS CCA 72 bp TCCTGGGTCATGCTTTGCCACTCTGACTTCAGCTGCTaGATGCGAGCCTCGGACTCCTGGGAGGCCCGGACG +
Preference number: 6 (lower is better)
Translates to: SWVMLCHSDFSC*MRASDSWEART
Trigger: CGTCCGGGCCTCCCAGGAGTCCGAGGCTCGCATCCAGCAGCTGAAGTCAGAGTGGCAAAGCATGACCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000464202.1
CDS GCA 72 bp CAAGGCCTCTCCTGGGGGTTCTGGCTGCAGAACCCCTaGCTGTCCCAAGGAGCTAATTCTGAGCCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: QGLSWGFWLQNP*LSQGANSEPAP
Trigger: GGGAGCAGGCTCAGAATTAGCTCCTTGGGACAGGCAGGGGTTCTGCAGCCAGAACCCCCAGGAGAGGCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469086.5
CDS CCA 72 bp AGTTGGCGTCACCATGCAGTTCCTCCAGGGAGCTCCTaGGTGGGAACCAGGACTCGTGGACCAGCGACTCAC +
Preference number: 6 (lower is better)
Translates to: SWRHHAVPPGSS*VGTRTRGPATH
Trigger: GTGAGTCGCTGGTCCACGAGTCCTGGTTCCCACCCAGGAGCTCCCTGGAGGAACTGCATGGTGACGCCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000417332.5
ENST00000420859.5
ENST00000433561.5
ENST00000438058.5
ENST00000439339.1
ENST00000452294.5
ENST00000456894.5
ENST00000480307.1
ENST00000494273.1
CDS GCA 72 bp CGAGCTGGAACTCTGCTGGTCCACATCCGAGTAGCCTaGGGGGAACGAGGACACTGGCTCAGTCTCTGTCAC +
Preference number: 6 (lower is better)
Translates to: RAGTLLVHIRVA*GERGHWLSLCH
Trigger: GTGACAGAGACTGAGCCAGTGTCCTCGTTCCCCGCAGGCTACTCGGATGTGGACCAGCAGAGTTCCAGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405018.5
CDS CCA 72 bp GTAGGAGGTGTGTGCATCAGAGGACGGGCCCAGCTGTaGCGCTGGGGACAGGCGCTTCATGTTGCTGGATTT +
Preference number: 6 (lower is better)
Translates to: VGGVCIRGRAQL*RWGQALHVAGF
Trigger: AAATCCAGCAACATGAAGCGCCTGTCCCCAGCGCCACAGCTGGGCCCGTCCTCTGATGCACACACCTCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000417332.5
ENST00000420859.5
ENST00000433561.5
ENST00000438058.5
ENST00000439339.1
ENST00000452294.5
ENST00000456894.5
ENST00000480307.1
ENST00000494273.1
CDS CCA 72 bp TCCTCCAGCCGCCTCAGCTCCTTCACAGAGCTCTCCTaGAAGGACTCCTGGGTCATGCTGGTCCCAGAGAGA +
Preference number: 6 (lower is better)
Translates to: SSSRLSSFTELS*KDSWVMLVPER
Trigger: TCTCTCTGGGACCAGCATGACCCAGGAGTCCTTCCAGGAGAGCTCTGTGAAGGAGCTGAGGCGGCTGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469086.5
CDS CAA 72 bp GGGGCACTGGAGATAGTGCTGTTGGGTGACAAGGCCTaGGGCACATGCTCTAAGGTAACGGCTGTGGGGCGG +
Preference number: 6 (lower is better)
Translates to: GALEIVLLGDKA*GTCSKVTAVGR
Trigger: CCGCCCCACAGCCGTTACCTTAGAGCATGTGCCCAAGGCCTTGTCACCCAACAGCACTATCTCCAGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000455125.1
ENST00000470642.1
CDS CAA 90 bp AAGTCCTTGGGGGCACTGGAGATAGTGCTGTTGGGTGACAAGGCCTaGGGCACATGCTCTAAGGTAACGGCTGTGGGGCGGATGCGGGCA +
Preference number: 6 (lower is better)
Translates to: KSLGALEIVLLGDKA*GTCSKVTAVGRMRA
Trigger: TGCCCGCATCCGCCCCACAGCCGTTACCTTAGAGCATGTGCCCAAGGCCTTGTCACCCAACAGCACTATCTCCAGTGCCCCCAAGGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000455125.1
ENST00000470642.1
CDS GCA 72 bp CAGACAGTTCTTCCTGGATGCGAGCAGCAGTTTCCCTaGGGAAATCCTCCTTCAGGGCAGCTTCACGGCGGC +
Preference number: 6 (lower is better)
Translates to: QTVLPGCEQQFP*GNPPSGQLHGG
Trigger: GCCGCCGTGAAGCTGCCCTGAAGGAGGATTTCCGCAGGGAAACTGCTGCTCGCATCCAGGAAGAACTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000464202.1
ENST00000469086.5
ENST00000477262.5
CDS GCA 72 bp GAGATAGTGCTGTTGGGTGACAAGGCCTTGGGCACATaGTCTAAGGTAACGGCTGTGGGGCGGATGCGGGCA +
Preference number: 6 (lower is better)
Translates to: EIVLLGDKALGT*SKVTAVGRMRA
Trigger: TGCCCGCATCCGCCCCACAGCCGTTACCTTAGAGCATGTGCCCAAGGCCTTGTCACCCAACAGCACTATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000455125.1
ENST00000470642.1
CDS CCA 72 bp TGGTTAAAACGAAGACGTCAAGGAGGGAGGCAGCTGTaGTCAGGCGGTACCAGGTGGTGCCAGCCCACCAGT +
Preference number: 6 (lower is better)
Translates to: WLKRRRQGGRQL*SGGTRWCQPTS
Trigger: ACTGGTGGGCTGGCACCACCTGGTACCGCCTGACCACAGCTGCCTCCCTCCTTGACGTCTTCGTTTTAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000430185.5
ENST00000438058.5
ENST00000456894.5
ENST00000480307.1
CDS CCA 72 bp TCCTCCAGCCGCCTCAGCTCCTTCACAGAGCTCTCCTaGAAGGACTCCTGGGTCATGCTTTGCCACTCTGAC +
Preference number: 6 (lower is better)
Translates to: SSSRLSSFTELS*KDSWVMLCHSD
Trigger: GTCAGAGTGGCAAAGCATGACCCAGGAGTCCTTCCAGGAGAGCTCTGTGAAGGAGCTGAGGCGGCTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000464202.1
CDS CCA 72 bp TCCTCCAGCCGCCTCAGCTCCTTCACAGAGCTCTCCTaGAAGGACTCCTGGGTCATGCATCTGCTTGGCAAG +
Preference number: 6 (lower is better)
Translates to: SSSRLSSFTELS*KDSWVMHLLGK
Trigger: CTTGCCAAGCAGATGCATGACCCAGGAGTCCTTCCAGGAGAGCTCTGTGAAGGAGCTGAGGCGGCTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477262.5
CDS TCA 72 bp GAGCCTCGGACTCCTGGGAGGCCCGGACGATCTTCTTaGAGAGGTCTTCTGAGTCTTGCTGATGCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: EPRTPGRPGRSS*RGLLSLADALL
Trigger: GAGCAGAGCATCAGCAAGACTCAGAAGACCTCTTCAAGAAGATCGTCCGGGCCTCCCAGGAGTCCGAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000464202.1
ENST00000469086.5
ENST00000477262.5
CDS CCA 72 bp CGCGTGAGGCGCTGGCTTCTTCGGGACATGATGAGGTaGGATGTGGACTCTTCCCCTGAAGAGAATCTGCTG +
Preference number: 6 (lower is better)
Translates to: RVRRWLLRDMMR*DVDSSPEENLL
Trigger: CAGCAGATTCTCTTCAGGGGAAGAGTCCACATCCCACCTCATCATGTCCCGAAGAAGCCAGCGCCTCACGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405018.5
CDS CCA 72 bp GTCCACATCCGAGTAGCCTGCGGGGAACGAGGACACTaGCTCAGTCTCTGTCACTTTCGAGCCTCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: VHIRVACGERGH*LSLCHFRASSF
Trigger: GAAGGAAGAGGCTCGAAAGTGACAGAGACTGAGCCAGTGTCCTCGTTCCCCGCAGGCTACTCGGATGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405018.5
CDS CCA 72 bp CGCGTGAGGCGCTGGCTTCTTCGGGACATGATGAGGTaGGATGTGGACTCTTCCCCTGAAGAGAATCAGTGG +
Preference number: 6 (lower is better)
Translates to: RVRRWLLRDMMR*DVDSSPEENQW
Trigger: CCACTGATTCTCTTCAGGGGAAGAGTCCACATCCCACCTCATCATGTCCCGAAGAAGCCAGCGCCTCACGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433561.5
CDS CCA 72 bp CGCGTGAGGCGCTGGCTTCTTCGGGACATGATGAGGTaGGATGTGGACTCTTCCCCTGAAGAGAATCTGAAG +
Preference number: 6 (lower is better)
Translates to: RVRRWLLRDMMR*DVDSSPEENLK
Trigger: CTTCAGATTCTCTTCAGGGGAAGAGTCCACATCCCACCTCATCATGTCCCGAAGAAGCCAGCGCCTCACGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000405510.5
ENST00000417332.5
ENST00000420859.5
ENST00000438058.5
ENST00000439339.1
ENST00000452294.5
ENST00000456894.5
ENST00000494273.1
CDS GCA 72 bp GCCCTTCTGGAAGGTGCCTTCCCCTGTGCTGACGTCTaGAGGATGCGTGTTACACCCCATTTGGATATCACA +
Preference number: 6 (lower is better)
Translates to: ALLEGAFPCADV*RMRVTPHLDIT
Trigger: TGTGATATCCAAATGGGGTGTAACACGCATCCTGCAGACGTCAGCACAGGGGAAGGCACCTTCCAGAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS CCA 72 bp CGCTTCATGTTGCTGGATTTCCTCTTCAAGGTCCTGTaGGACAACCATGAGGGCAGAGGTAGGGAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: RFMLLDFLFKVL*DNHEGRGREQG
Trigger: TCCCTGCTCCCTACCTCTGCCCTCATGGTTGTCCCACAGGACCTTGAAGAGGAAATCCAGCAACATGAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480307.1
CDS CAA 90 bp CTCCCTGGCCCAGGATGGTACTCGGTACGTCCTGACTTCCCTGAATaGCCACTTGCCTTTGTCATGGGTACTAGGTTGGGTGATTTCTGC +
Preference number: 6 (lower is better)
Translates to: LPGPGWYSVRPDFPE*PLAFVMGTRLGDFC
Trigger: GCAGAAATCACCCAACCTAGTACCCATGACAAAGGCAAGTGGCAATTCAGGGAAGTCAGGACGTACCGAGTACCATCCTGGGCCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470642.1
CDS CAA 90 bp GGGTCATGCTGGTCCCAGAGAGAGAAGAGTAAGCCTCGGATCTCTTaGGTGGGAGGTAAGGCCACACCAAAGATGAAAGAGGACCCCCTA +
Preference number: 6 (lower is better)
Translates to: GSCWSQREKSKPRIS*VGGKATPKMKEDPL
Trigger: TAGGGGGTCCTCTTTCATCTTTGGTGTGGCCTTACCTCCCACCAAAGAGATCCGAGGCTTACTCTTCTCTCTCTGGGACCAGCATGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469086.5
CDS TCA 72 bp CTGCCGCTGGGAAGAACTAAATATTCTGATGGAGGTTaGGCGGGGAGTGCTGAAAACTGTCAGCACCCGCCT +
Preference number: 6 (lower is better)
Translates to: LPLGRTKYSDGG*AGSAENCQHPP
Trigger: AGGCGGGTGCTGACAGTTTTCAGCACTCCCCGCTCAACCTCCATCAGAATATTTAGTTCTTCCCAGCGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456894.5
CDS CCA 72 bp ACGGTGTGCTGGTTCTGGATCAAGGCCTCAAAGGTCTaGTTGCCTTGGTTCTCTCTTGAAACCCTGCCTGGA +
Preference number: 6 (lower is better)
Translates to: TVCWFWIKASKV*LPWFSLETLPG
Trigger: TCCAGGCAGGGTTTCAAGAGAGAACCAAGGCAACCAGACCTTTGAGGCCTTGATCCAGAACCAGCACACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430185.5
CDS TCA 72 bp CGGACGATCTTCTTGAAGAGGTCTTCTGAGTCTTGCTaGTGCTCTGCTCTCAGGGCAGACAGTTCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: RTIFLKRSSESC*CSALRADSSSW
Trigger: CCAGGAAGAACTGTCTGCCCTGAGAGCAGAGCATCAGCAAGACTCAGAAGACCTCTTCAAGAAGATCGTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000405018.5
ENST00000405510.5
ENST00000406622.5
ENST00000464202.1
ENST00000469086.5
ENST00000477262.5
CDS GCA 72 bp TGGAAGGTGCCTTCCCCTGTGCTGACGTCTGCAGGATaGGTGTTACACCCCATTTGGATATCACATCTTGAG +
Preference number: 6 (lower is better)
Translates to: WKVPSPVLTSAG*VLHPIWISHLE
Trigger: CTCAAGATGTGATATCCAAATGGGGTGTAACACGCATCCTGCAGACGTCAGCACAGGGGAAGGCACCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS GCA 72 bp CAGGATGGTACTCGGTACGTCCTGACTTCCCTGAATTaGCACTTGCCTTTGTCATGGGTACTAGGTTGGGTG +
Preference number: 6 (lower is better)
Translates to: QDGTRYVLTSLN*HLPLSWVLGWV
Trigger: CACCCAACCTAGTACCCATGACAAAGGCAAGTGGCAATTCAGGGAAGTCAGGACGTACCGAGTACCATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470642.1
CDS CCA 72 bp TGGTTCTGGATCAAGGCCTCAAAGGTCTGGTTGCCTTaGTTCTCTCTTGAAACCCTGCCTGGAAATGTGGCG +
Preference number: 6 (lower is better)
Translates to: WFWIKASKVWLP*FSLETLPGNVA
Trigger: CGCCACATTTCCAGGCAGGGTTTCAAGAGAGAACCAAGGCAACCAGACCTTTGAGGCCTTGATCCAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430185.5
CDS CAA 72 bp CCAGGATGGTACTCGGTACGTCCTGACTTCCCTGAATaGCCACTTGCCTTTGTCATGGGTACTAGGTTGGGT +
Preference number: 6 (lower is better)
Translates to: PGWYSVRPDFPE*PLAFVMGTRLG
Trigger: ACCCAACCTAGTACCCATGACAAAGGCAAGTGGCAATTCAGGGAAGTCAGGACGTACCGAGTACCATCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470642.1
CDS CAA 90 bp GCCCAGGATGGTACTCGGTACGTCCTGACTTCCCTGAATTGCCACTaGCCTTTGTCATGGGTACTAGGTTGGGTGATTTCTGCTGATCCT +
Preference number: 6 (lower is better)
Translates to: AQDGTRYVLTSLNCH*PLSWVLGWVISADP
Trigger: AGGATCAGCAGAAATCACCCAACCTAGTACCCATGACAAAGGCAAGTGGCAATTCAGGGAAGTCAGGACGTACCGAGTACCATCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470642.1
CDS TCA 72 bp AGGATGCGTGTTACACCCCATTTGGATATCACATCTTaGGCTGTGGGAAAGGAGAGCAGGGCTTCCCTCTCT +
Preference number: 6 (lower is better)
Translates to: RMRVTPHLDITS*AVGKESRASLS
Trigger: AGAGAGGGAAGCCCTGCTCTCCTTTCCCACAGCTCAAGATGTGATATCCAAATGGGGTGTAACACGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS CCA 72 bp GTGCTGACGTCTGCAGGATGCGTGTTACACCCCATTTaGATATCACATCTTGAGCTGTGGGAAAGGAGAGCA +
Preference number: 6 (lower is better)
Translates to: VLTSAGCVLHPI*ISHLELWERRA
Trigger: TGCTCTCCTTTCCCACAGCTCAAGATGTGATATCCAAATGGGGTGTAACACGCATCCTGCAGACGTCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455125.1
CDS CAA 72 bp GTGTGCTGGTTCTGGATCAAGGCCTCAAAGGTCTGGTaGCCTTGGTTCTCTCTTGAAACCCTGCCTGGAAAT +
Preference number: 6 (lower is better)
Translates to: VCWFWIKASKVW*PWFSLETLPGN
Trigger: ATTTCCAGGCAGGGTTTCAAGAGAGAACCAAGGCAACCAGACCTTTGAGGCCTTGATCCAGAACCAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430185.5
CDS CAA 72 bp TGGTCCCAGAGAGAGAAGAGTAAGCCTCGGATCTCTTaGGTGGGAGGTAAGGCCACACCAAAGATGAAAGAG +
Preference number: 6 (lower is better)
Translates to: WSQREKSKPRIS*VGGKATPKMKE
Trigger: CTCTTTCATCTTTGGTGTGGCCTTACCTCCCACCAAAGAGATCCGAGGCTTACTCTTCTCTCTCTGGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469086.5
CDS CAA 90 bp GATGGTACTCGGTACGTCCTGACTTCCCTGAATTGCCACTTGCCTTaGTCATGGGTACTAGGTTGGGTGATTTCTGCTGATCCTGAGCTT +
Preference number: 6 (lower is better)
Translates to: DGTRYVLTSLNCHLP*SWVLGWVISADPEL
Trigger: AAGCTCAGGATCAGCAGAAATCACCCAACCTAGTACCCATGACAAAGGCAAGTGGCAATTCAGGGAAGTCAGGACGTACCGAGTACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470642.1
CDS CCA 72 bp GTCCTGACTTCCCTGAATTGCCACTTGCCTTTGTCATaGGTACTAGGTTGGGTGATTTCTGCTGATCCTGAG +
Preference number: 6 (lower is better)
Translates to: VLTSLNCHLPLS*VLGWVISADPE
Trigger: CTCAGGATCAGCAGAAATCACCCAACCTAGTACCCATGACAAAGGCAAGTGGCAATTCAGGGAAGTCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470642.1
CDS CAA 72 bp CGGTACGTCCTGACTTCCCTGAATTGCCACTTGCCTTaGTCATGGGTACTAGGTTGGGTGATTTCTGCTGAT +
Preference number: 6 (lower is better)
Translates to: RYVLTSLNCHLP*SWVLGWVISAD
Trigger: ATCAGCAGAAATCACCCAACCTAGTACCCATGACAAAGGCAAGTGGCAATTCAGGGAAGTCAGGACGTACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470642.1
CDS CAA 72 bp GGTACTCGGTACGTCCTGACTTCCCTGAATTGCCACTaGCCTTTGTCATGGGTACTAGGTTGGGTGATTTCT +
Preference number: 6 (lower is better)
Translates to: GTRYVLTSLNCH*PLSWVLGWVIS
Trigger: AGAAATCACCCAACCTAGTACCCATGACAAAGGCAAGTGGCAATTCAGGGAAGTCAGGACGTACCGAGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470642.1
CDS TCA 72 bp CCTGCGGCATCCTGGCATCACAAAACAGTTTACCATTaGGTCTGGGTTTCACAAGATGAAAAAGGTCGAGGC +
Preference number: 6 (lower is better)
Translates to: PAASWHHKTVYH*VWVSQDEKGRG
Trigger: GCCTCGACCTTTTTCATCTTGTGAAACCCAGACTCAATGGTAAACTGTTTTGTGATGCCAGGATGCCGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456894.5
CDS CCA 72 bp CAAGGCAACATGTTTATACCATACCCAAGCTGCCGCTaGGAAGAACTAAATATTCTGATGGAGGTTGAGCGG +
Preference number: 6 (lower is better)
Translates to: QGNMFIPYPSCR*EELNILMEVER
Trigger: CCGCTCAACCTCCATCAGAATATTTAGTTCTTCCCAGCGGCAGCTTGGGTATGGTATAAACATGTTGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456894.5
CDS GCA 72 bp CAGAAACAAGGCAACATGTTTATACCATACCCAAGCTaGCGCTGGGAAGAACTAAATATTCTGATGGAGGTT +
Preference number: 6 (lower is better)
Translates to: QKQGNMFIPYPS*RWEELNILMEV
Trigger: AACCTCCATCAGAATATTTAGTTCTTCCCAGCGGCAGCTTGGGTATGGTATAAACATGTTGCCTTGTTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456894.5