RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SUMF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000144455

Ensembl transcript IDs: ENST00000272902.10, ENST00000383843.9, ENST00000405420.2, ENST00000448413.5, ENST00000458465.6, ENST00000469888.1, ENST00000470751.5, ENST00000484993.1

Found 357 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCCAGCTGGGTAATTCCAGGAGTTACTCAAGAGCCACAACCCAGTaGGAGAGCACGTGCATCTCTTTGGCCAGGACACAGAGCAGGCAA +
Preference number: 1 (lower is better)
Translates to: FQLGNSRSYSRATTQ*ESTCISLARTQSRQ
Trigger: TTGCCTGCTCTGTGTCCTGGCCAAAGAGATGCACGTGCTCTCTCACTGGGTTGTGGCTCTTGAGTAACTCCTGGAATTACCCAGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR CCA 90 bp TGCACTGACCCAGGTCAGCAATTTGGTCTCACAAGGCGGTTCCTTTaGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTT +
Preference number: 1 (lower is better)
Translates to: CTDPGQQFGLTRRFL*PLGRYVTHLRVGIL
Trigger: AAGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTGCTGACCTGGGTCAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR TCA 90 bp CTTCCTGCTTTCCAGCTCCAGATTCCTTCAGGAAGAACTGAAGCCTaGGAGGCAGAGGACTCTGGAACGTCTGGAGGGCATTTAGTCGTT +
Preference number: 1 (lower is better)
Translates to: LPAFQLQIPSGRTEA*EAEDSGTSGGHLVV
Trigger: AACGACTAAATGCCCTCCAGACGTTCCAGAGTCCTCTGCCTCTCAGGCTTCAGTTCTTCCTGAAGGAATCTGGAGCTGGAAAGCAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR TCA 90 bp CCCACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTaGGAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTG +
Preference number: 1 (lower is better)
Translates to: PTSGWEFFAWDRSKF*EKPNVGQTRLLLGL
Trigger: CAGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR TCA 90 bp CAAATTGCTTCCTGCTTTCCAGCTCCAGATTCCTTCAGGAAGAACTaGAGCCTGAGAGGCAGAGGACTCTGGAACGTCTGGAGGGCATTT +
Preference number: 1 (lower is better)
Translates to: QIASCFPAPDSFRKN*SLRGRGLWNVWRAF
Trigger: AAATGCCCTCCAGACGTTCCAGAGTCCTCTGCCTCTCAGGCTTCAGTTCTTCCTGAAGGAATCTGGAGCTGGAAAGCAGGAAGCAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR TCA 90 bp AGCACAGTAGAGTCACCCCACAGACATTCCTATGTGTTCAACGGCTaGACTTCAGCATACCATCACCGGCCCCATGTGGGATTCATCATA +
Preference number: 1 (lower is better)
Translates to: STVESPHRHSYVFNG*TSAYHHRPHVGFII
Trigger: TATGATGAATCCCACATGGGGCCGGTGATGGTATGCTGAAGTTCAGCCGTTGAACACATAGGAATGTCTGTGGGGTGACTCTACTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272902.10
3UTR TCA 90 bp TCTTTGGCCAGGACACAGAGCAGGCAAGCTCTTTTGTGGTGGAGATaGTGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAATCTGGCC +
Preference number: 1 (lower is better)
Translates to: SLARTQSRQALLWWR*CSGHKFKASAENLA
Trigger: GGCCAGATTCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAGCTTGCCTGCTCTGTGTCCTGGCCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR GCA 90 bp TGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTTTaGATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGTAGGTCA +
Preference number: 1 (lower is better)
Translates to: WPLGRYVTHLRVGIL*MGSFKVLRKAQCRS
Trigger: TGACCTACATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR TCA 90 bp TCACATAATCACGAGGTAAAGTCTCACGATAGGCCGTCTTCAAGTTaGAGAGCAAGGAAGCCAGTGGTGGATCAGTCTGAGTCCCAAAAC +
Preference number: 1 (lower is better)
Translates to: SHNHEVKSHDRPSSS*RARKPVVDQSESQN
Trigger: GTTTTGGGACTCAGACTGATCCACCACTGGCTTCCTTGCTCTTCAACTTGAAGACGGCCTATCGTGAGACTTTACCTCGTGATTATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR TCA 90 bp GAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATCTaGAAGCCCTTGTTAAGTATCACAATCAGCACTGGGGCCTGTAGC +
Preference number: 1 (lower is better)
Translates to: EAAFLTLCYTLVSDI*KPLLSITISTGACS
Trigger: GCTACAGGCCCCAGTGCTGATTGTGATACTTAACAAGGGCTTTCAGATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR CCA 90 bp GGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGACACGACTGCTCCTTaGACTGGGGAAGACTTTCCT +
Preference number: 2 (lower is better)
Translates to: GLTRRFLWPLGRYVTHLRDTTAP*TGEDFP
Trigger: AGGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTC...CCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR CAA 90 bp GACCCAGGTCAGCAATTTGGTCTCACAAGGCGGTTCCTTTGGCCATaGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTTTGCATG +
Preference number: 2 (lower is better)
Translates to: DPGQQFGLTRRFLWP*GRYVTHLRVGILCM
Trigger: CATGCAAAGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTGCTGACCTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR CAA 90 bp CTGAGAGGCAGAGGACTCTGGAACGTCTGGAGGGCATTTAGTCGTTaGTCCCATAGTCTGCTGGCAGTTCTGTTTTCTTCTCAGGCACTT +
Preference number: 2 (lower is better)
Translates to: LRGRGLWNVWRAFSR*SHSLLAVLFSSQAL
Trigger: AAGTGCCTGAGAAGAAAACAGAACTGCCAGCAGACTATGGGACAAACGACTAAATGCCCTCCAGACGTTCCAGAGTCCTCTGCCTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR CCA 90 bp CACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCGACACGACTGCTCCTTaGACTGGGGAAGACTTTCCT +
Preference number: 2 (lower is better)
Translates to: HLRVGILCMGSFKVLRKADTTAP*TGEDFP
Trigger: AGGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTC...GGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR-3UTR TCA 90 bp TTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCGATCGTTCAAAGTTCTaGGAAAAGCCCAATGTAGGT +
Preference number: 2 (lower is better)
Translates to: FGLTRRFLWPLGRYVTHLDRSKF*EKPNVG
Trigger: ACCTACATTGGGCTTTTCTCAGAACTTTGAACGATC...GAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR-3UTR GCA 90 bp TTCCTATGTGTTCAACGGCTGAACTTCAGCATACCATCACCGGCCCCATGTGGGAGGGTGGGAATTCTTTaGATGGGATCGTTCAAAGTT +
Preference number: 2 (lower is better)
Translates to: FLCVQRLNFSIPSPAPCGRVGIL*MGSFKV
Trigger: AACTTTGAACGATCCCATGCAAAGAATTCCCACCCT...CCCACATGGGGCCGGTGATGGTATGCTGAAGTTCAGCCGTTGAACACATAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272902.10
3UTR-3UTR CCA 90 bp CAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGGACACGACTGCTCCTTaGACTGGGGAAGACTTTCCT +
Preference number: 2 (lower is better)
Translates to: QGGNSLHGIVQSSEKSPMDTTAP*TGEDFP
Trigger: AGGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTC...CATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR-3UTR CCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCGGACTCTGGAACGTCTaGAGGGCATTTAGTCGTTTG +
Preference number: 2 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSGLWNV*RAFSRL
Trigger: CAAACGACTAAATGCCCTCCAGACGTTCCAGAGTCC...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR TCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGATCCTTCAGGAAGAACTaGAGCCTGAGAGGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: LFCGGDDALDISSKHQQRSFRKN*SLRGRG
Trigger: TCCTCTGCCTCTCAGGCTTCAGTTCTTCCTGAAGGA...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR CCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAAGAGGCAGAGGACTCTaGAACGTCTGGAGGGCATTT +
Preference number: 2 (lower is better)
Translates to: LFCGGDDALDISSKHQQRRGRGL*NVWRAF
Trigger: AAATGCCCTCCAGACGTTCCAGAGTCCTCTGCCTCT...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR CCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCACTTTCCACTGTGAGTaGAGAACCAACTCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSTFHCE*RTNSSH
Trigger: GTGAGAGGAGTTGGTTCTCCACTCACAGTGGAAAGT...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR TCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGATTGAAGGCAGCCACTTaGTACTGGGGAGTTTGCAAG +
Preference number: 2 (lower is better)
Translates to: LFCGGDDALDISSKHQQRLKAAT*YWGVCK
Trigger: CTTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAA...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR GCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCAATTCCACAGCAAATTaGTTCCTGCTTTCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSNSTAN*FLLSSS
Trigger: GGAGCTGGAAAGCAGGAAGCAATTTGCTGTGGAATT...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR TCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTACTGGGGCCTGTAGCTaGAGGCAGAGTGGCCTTCAG +
Preference number: 2 (lower is better)
Translates to: ESLLLISPGNLYCISQGSTGACS*RQSGLQ
Trigger: CTGAAGGCCACTCTGCCTTCAGCTACAGGCCCCAGT...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR GCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAAAGAAGACTTTGCTGTaGACCCAAGGTCACAGAGCT +
Preference number: 2 (lower is better)
Translates to: LFCGGDDALDISSKHQQRKKTLL*TQGHRA
Trigger: AGCTCTGTGACCTTGGGTGCACAGCAAAGTCTTCTT...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR TCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAAGAAGGGTTGGATTTTaGAGGCAGCCACTTGATACT +
Preference number: 2 (lower is better)
Translates to: LFCGGDDALDISSKHQQRRRVGF*RQPLDT
Trigger: AGTATCAAGTGGCTGCCTTCAAAATCCAACCCTTCT...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR GCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCTTTTTCCAGTGGAAGTaGAAAATACTCCCATGTCAT +
Preference number: 2 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSFFQWK*KILPCH
Trigger: ATGACATGGGAGTATTTTGCACTTCCACTGGAAAAA...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR TCA 90 bp TTCCCTATATCTAGAATTAAACAGGTTTCCCCGTTTAGCGCACATTTCACGTTCTATGTGTTCAACGGCTaGACTTCAGCATACCATCAC +
Preference number: 2 (lower is better)
Translates to: FPISRIKQVSPFSAHFTFYVFNG*TSAYHH
Trigger: GTGATGGTATGCTGAAGTTCAGCCGTTGAACACATA...GAACGTGAAATGTGCGCTAAACGGGGAAACCTGTTTAATTCTAGATATAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272902.10
3UTR-3UTR GCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTGGGAGAAGAAGACTTTaGTGTGCACCCAAGGTCACA +
Preference number: 2 (lower is better)
Translates to: ESLLLISPGNLYCISQGSGRRRL*CAPKVT
Trigger: TGTGACCTTGGGTGCACAGCAAAGTCTTCTTCTCCC...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR TCA 72 bp CCCCTGTGGCAGAGCCTGCGTAGGACGCGGGCCTCCTaGAGCCTAGCTCAGGGTTCCCTCCACTCCCCTTCC +
Preference number: 3 (lower is better)
Translates to: PLWQSLRRTRAS*SLAQGSLHSPS
Trigger: GGAAGGGGAGTGGAGGGAACCCTGAGCTAGGCTTCAGGAGGCCCGCGTCCTACGCAGGCTCTGCCACAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR TCA 72 bp TGCTGTCCATCCCTTCATTTGATAGGGGAGGGCACTTaGGGCCCAGGAAGGTCAAGCGTCGGACCTGGGGTC +
Preference number: 3 (lower is better)
Translates to: CCPSLHLIGEGT*GPGRSSVGPGV
Trigger: GACCCCAGGTCCGACGCTTGACCTTCCTGGGCCTCAAGTGCCCTCCCCTATCAAATGAAGGGATGGACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272902.10
3UTR-3UTR CAA 90 bp GCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTAGACACGACTGCTCCTaGGACTGGGGAAGACTTTCC +
Preference number: 3 (lower is better)
Translates to: AVPLAIGQVCNPPQGGNSRHDCS*DWGRLS
Trigger: GGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCT...AGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR TCA 72 bp GAGTCACCCCACAGACATTCCTATGTGTTCAACGGCTaGACTTCAGCATACCATCACCGGCCCCATGTGGGA +
Preference number: 3 (lower is better)
Translates to: ESPHRHSYVFNG*TSAYHHRPHVG
Trigger: TCCCACATGGGGCCGGTGATGGTATGCTGAAGTTCAGCCGTTGAACACATAGGAATGTCTGTGGGGTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272902.10
3UTR TCA 72 bp TCCTGCTTTCCAGCTCCAGATTCCTTCAGGAAGAACTaGAGCCTGAGAGGCAGAGGACTCTGGAACGTCTGG +
Preference number: 3 (lower is better)
Translates to: SCFPAPDSFRKN*SLRGRGLWNVW
Trigger: CCAGACGTTCCAGAGTCCTCTGCCTCTCAGGCTTCAGTTCTTCCTGAAGGAATCTGGAGCTGGAAAGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR TCA 72 bp GGTAATTCCAGGAGTTACTCAAGAGCCACAACCCAGTaGGAGAGCACGTGCATCTCTTTGGCCAGGACACAG +
Preference number: 3 (lower is better)
Translates to: GNSRSYSRATTQ*ESTCISLARTQ
Trigger: CTGTGTCCTGGCCAAAGAGATGCACGTGCTCTCTCACTGGGTTGTGGCTCTTGAGTAACTCCTGGAATTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR CAA 90 bp AAAGATGCACCACACCATAAAGCACATGCACTGACCCAGGTCAGCAATTTGGTCCGGTTCCTTTGGCCATaGGGCAGGTATGTAACCCAC +
Preference number: 3 (lower is better)
Translates to: KDAPHHKAHALTQVSNLVRFLWP*GRYVTH
Trigger: GTGGGTTACATACCTGCCCAATGGCCAAAGGAACCG...GACCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTATGGTGTGGTGCATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR-3UTR CAA 90 bp AAAGATGCACCACACCATAAAGCACATGCACTGACCCAGGTCAGCAATTTGGTCCACAAGGCGGTTCCTTaGGCCATTGGGCAGGTATGT +
Preference number: 3 (lower is better)
Translates to: KDAPHHKAHALTQVSNLVHKAVP*AIGQVC
Trigger: ACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTG...GACCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTATGGTGTGGTGCATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR-3UTR CAA 90 bp GGAAGAGAAGGGTTGGATTTTGAAGGCAGCCACTTGATACTGGGGAGTTTGCAAGGGGAGAAGAAGACTTaGCTGTGCACCCAAGGTCAC +
Preference number: 3 (lower is better)
Translates to: GREGLDFEGSHLILGSLQGEKKT*LCTQGH
Trigger: GTGACCTTGGGTGCACAGCAAAGTCTTCTTCTCCCC...TTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAAAATCCAACCCTTCTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR TCA 72 bp CACGAGGTAAAGTCTCACGATAGGCCGTCTTCAAGTTaGAGAGCAAGGAAGCCAGTGGTGGATCAGTCTGAG +
Preference number: 3 (lower is better)
Translates to: HEVKSHDRPSSS*RARKPVVDQSE
Trigger: CTCAGACTGATCCACCACTGGCTTCCTTGCTCTTCAACTTGAAGACGGCCTATCGTGAGACTTTACCTCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR GCA 72 bp TTAGAACTGGTGAGTTGGAGAGACACCCAGAGGTCATaGTGTCCATCCCTTCATTTGATAGGGGAGGGCACT +
Preference number: 3 (lower is better)
Translates to: LELVSWRDTQRS*CPSLHLIGEGT
Trigger: AGTGCCCTCCCCTATCAAATGAAGGGATGGACAGCATGACCTCTGGGTGTCTCTCCAACTCACCAGTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272902.10
3UTR CCA 72 bp GCTCTGGACATAAGTTCAAAGCATCAGCAGAGAATCTaGCCTGAGTCCACTATGAATCCACCCTGGGGAACC +
Preference number: 3 (lower is better)
Translates to: ALDISSKHQQRI*PESTMNPPWGT
Trigger: GGTTCCCCAGGGTGGATTCATAGTGGACTCAGGCCAGATTCTCTGCTGATGCTTTGAACTTATGTCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR CAA 90 bp CAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGAGACACGACTGCTCCTaGGACTGGGGAAGACTTTCC +
Preference number: 3 (lower is better)
Translates to: QGGNSLHGIVQSSEKSPMRHDCS*DWGRLS
Trigger: GGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCT...CATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR-3UTR CAA 90 bp CAATTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCAGGGTGGGAATTCTTaGCATGGGATCGTTCAAAGT +
Preference number: 3 (lower is better)
Translates to: QFGLTRRFLWPLGRYVTHQGGNS*HGIVQS
Trigger: ACTTTGAACGATCCCATGCAAAGAATTCCCACCCTG...GTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR-3UTR CAA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCCTGGGAAGAGAAGGGTaGGATTTTGAAGGCAGCCAC +
Preference number: 3 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSLGREG*DFEGSH
Trigger: GTGGCTGCCTTCAAAATCCAACCCTTCTCTTCCCAG...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR TCA 72 bp TCTCCAAAGATGCACCACACCATAAAGCACATGCACTaGCCCAGGTCAGCAATTTGGTCTCACAAGGCGGTT +
Preference number: 3 (lower is better)
Translates to: SPKMHHTIKHMH*PRSAIWSHKAV
Trigger: AACCGCCTTGTGAGACCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTATGGTGTGGTGCATCTTTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR TCA 72 bp TGGGAAGAGAAGGGTTGGATTTTGAAGGCAGCCACTTaGTACTGGGGAGTTTGCAAGTTGAGCCTTCCTGAG +
Preference number: 3 (lower is better)
Translates to: WEEKGWILKAAT*YWGVCKLSLPE
Trigger: CTCAGGAAGGCTCAACTTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAAAATCCAACCCTTCTCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR TCA 72 bp GGACATAAGTTCAAAGCATCAGCAGAGAATCTGGCCTaGGTCCACTATGAATCCACCCTGGGGAACCTTCAG +
Preference number: 3 (lower is better)
Translates to: GHKFKASAENLA*VHYESTLGNLQ
Trigger: CTGAAGGTTCCCCAGGGTGGATTCATAGTGGACTCAGGCCAGATTCTCTGCTGATGCTTTGAACTTATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR TCA 72 bp GGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTaGGAAAAGCCCAATGTAGGTCAGACACGACTGCTC +
Preference number: 3 (lower is better)
Translates to: GWEFFAWDRSKF*EKPNVGQTRLL
Trigger: GAGCAGTCGTGTCTGACCTACATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
3UTR TCA 72 bp CAAAGCATCAGCAGAGAATCTGGCCTGAGTCCACTATaGATCCACCCTGGGGAACCTTCAGATAAATCGCTT +
Preference number: 3 (lower is better)
Translates to: QSISRESGLSPL*IHPGEPSDKSL
Trigger: AAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTCATAGTGGACTCAGGCCAGATTCTCTGCTGATGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR CAA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCGTCACAGAGCTGAATTaGAAACCAAGTCTGTCTCTC +
Preference number: 3 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSVTELN*KPSLSL
Trigger: GAGAGACAGACTTGGTTTCAAATTCAGCTCTGTGAC...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR GCA 72 bp ACGTCTGGAGGGCATTTAGTCGTTTGTCCCATAGTCTaGTGGCAGTTCTGTTTTCTTCTCAGGCACTTCAAA +
Preference number: 3 (lower is better)
Translates to: TSGGHLVVCPIV*WQFCFLLRHFK
Trigger: TTTGAAGTGCCTGAGAAGAAAACAGAACTGCCAGCAGACTATGGGACAAACGACTAAATGCCCTCCAGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR-3UTR CAA 90 bp GATTTCCTTGGAAAAACAAAGTGCAGTACGAATATAAAGGAGTCACCACACCCCTTTAGAACTGGTGAGTaGGAGAGACACCCAGAGGTC +
Preference number: 3 (lower is better)
Translates to: DFLGKTKCSTNIKESPHPFRTGE*ERHPEV
Trigger: GACCTCTGGGTGTCTCTCCAACTCACCAGTTCTAAA...GGGGTGTGGTGACTCCTTTATATTCGTACTGCACTTTGTTTTTCCAAGGAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272902.10
3UTR-3UTR CAA 90 bp CCTGAATATAGCTCATTCAAGGTCCTCGTTCCTTTTTCCCTATATCTAGAATTAAGACACGACTGCTCCTaGGACTGGGGAAGACTTTCC +
Preference number: 3 (lower is better)
Translates to: PEYSSFKVLVPFSLYLELRHDCS*DWGRLS
Trigger: GGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCT...TAATTCTAGATATAGGGAAAAAGGAACGAGGACCTTGAATGAGCTATATTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272902.10
3UTR-3UTR CAA 90 bp TTCCCTATATCTAGAATTAAACAGGTTTCCCCGTTTAGCGCACATTTCACGTTCCAGGGTGGGAATTCTTaGCATGGGATCGTTCAAAGT +
Preference number: 3 (lower is better)
Translates to: FPISRIKQVSPFSAHFTFQGGNS*HGIVQS
Trigger: ACTTTGAACGATCCCATGCAAAGAATTCCCACCCTG...GAACGTGAAATGTGCGCTAAACGGGGAAACCTGTTTAATTCTAGATATAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CCA 90 bp GCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTGCTGCCGAACTGCCATaGGCGCCAGGCCGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AVPLAIGQVCNPPQGGNSAAELP*APGRWG
Trigger: GCCCCAGCGGCCTGGCGCCCATGGCAGTTCGGCAGC...AGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp GTATCACAATCAGCACTGGGGCCTGTAGCTGAAGGCAGAGTGGCCTTCAGGGACGGCCTCCTGGCTCCCTaGCGCTCCACACAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: VSQSALGPVAEGRVAFRDGLLAP*RSTQQR
Trigger: TCGCTGCTGTGTGGAGCGGCAGGGAGCCAGGAGGCC...GTCCCTGAAGGCCACTCTGCCTTCAGCTACAGGCCCCAGTGCTGATTGTGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp CGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTTCCGGTCCCGGCCTCCTaGCTCCCTGCCGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: RFLWPLGRYVTHLRVGILPVPAS*LPAAPH
Trigger: GTGTGGAGCGGCAGGGAGCCAGGAGGCCGGGACCGG...AAGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp GGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGCCCACTCAGCTTCCGTaGGCAGCCGCTTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GLTRRFLWPLGRYVTHLRPTQLP*AAASLP
Trigger: GGGCAGGGAAGCGGCTGCCCACGGAAGCTGAGTGGG...CCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR GCA 90 bp TTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCGAGCGGCTGCCGAACTaGCATGGGCGCCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: FGLTRRFLWPLGRYVTHLERLPN*HGRQAA
Trigger: AGCGGCCTGGCGCCCATGGCAGTTCGGCAGCCGCTC...GAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp GTATCACAATCAGCACTGGGGCCTGTAGCTGAAGGCAGAGTGGCCTTCAGGGACGTATCGGTGAGCGGCTaGCGAACTGCCATGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VSQSALGPVAEGRVAFRDVSVSG*RTAMGA
Trigger: GGCGCCCATGGCAGTTCGGCAGCCGCTCACCGATAC...GTCCCTGAAGGCCACTCTGCCTTCAGCTACAGGCCCCAGTGCTGATTGTGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GCAATTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCGGTCCCGGCCTCCTaGCTCCCTGCCGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: AIWSHKAVPLAIGQVCNPPVPAS*LPAAPH
Trigger: GTGTGGAGCGGCAGGGAGCCAGGAGGCCGGGACCGG...TGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp AGCGCACATTTCACGTTCGCTGAAGGCTTTGGGGAGAGGGGGAAACAGAGCTTAGGCCTCCTGGCTCCCTaGCGCTCCACACAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SAHFTFAEGFGERGKQSLGLLAP*RSTQQR
Trigger: TCGCTGCTGTGTGGAGCGGCAGGGAGCCAGGAGGCC...TAAGCTCTGTTTCCCCCTCTCCCCAAAGCCTTCAGCGAACGTGAAATGTGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR TCA 90 bp TTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCTCCCGCGAGTATCGGTaGGCGGCTGCCGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: FGLTRRFLWPLGRYVTHLSREYR*AAAELP
Trigger: TGGCAGTTCGGCAGCCGCTCACCGATACTCGCGGGA...GAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp CAATTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACGGCCTCCTGGCTCCCTaGCGCTCCACACAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: QFGLTRRFLWPLGRYVTHGLLAP*RSTQQR
Trigger: TCGCTGCTGTGTGGAGCGGCAGGGAGCCAGGAGGCC...GTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp GTGATGATCTCCAAAGATGCACCACACCATAAAGCACATGCACTGACCCAGGTCGAGCGGCTGCCGAACTaGCATGGGCGCCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: VMISKDAPHHKAHALTQVERLPN*HGRQAA
Trigger: AGCGGCCTGGCGCCCATGGCAGTTCGGCAGCCGCTC...GACCTGGGTCAGTGCATGTGCTTTATGGTGTGGTGCATCTTTGGAGATCATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp GCACATGCACTGACCCAGGTCAGCAATTTGGTCTCACAAGGCGGTTCCTTTGGCGGGCAGGCGGTCGGCTaGACAGCGGAATCCCAGATT +
Preference number: 4 (lower is better)
Translates to: AHALTQVSNLVSQGGSFGGQAVG*TAESQI
Trigger: AATCTGGGATTCCGCTGTGCAGCCGACCGCCTGCCC...GCCAAAGGAACCGCCTTGTGAGACCAAATTGCTGACCTGGGTCAGTGCATGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp CATAAAGCACATGCACTGACCCAGGTCAGCAATTTGGTCTCACAAGGCGGTTCCCCCTGTGGCAGAGCCTaGGTAGGACGCGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HKAHALTQVSNLVSQGGSPCGRA*VGRGPP
Trigger: AGGAGGCCCGCGTCCTACGCAGGCTCTGCCACAGGG...GGAACCGCCTTGTGAGACCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp GAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTGGGGAAGACTTTCCCCTGTGGCAGAGCCTaGGTAGGACGCGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: EKPNVGQTRLLLGLGKTFPCGRA*VGRGPP
Trigger: AGGAGGCCCGCGTCCTACGCAGGCTCTGCCACAGGG...GAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp AAAGATGCACCACACCATAAAGCACATGCACTGACCCAGGTCAGCAATTTGGTCCCGGTCCCGGCCTCCTaGCTCCCTGCCGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: KDAPHHKAHALTQVSNLVPVPAS*LPAAPH
Trigger: GTGTGGAGCGGCAGGGAGCCAGGAGGCCGGGACCGG...GACCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTATGGTGTGGTGCATCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp CATAAAGCACATGCACTGACCCAGGTCAGCAATTTGGTCTCACAAGGCGGTTCCAGGACGCGGGCCTCCTaGAGCCTAGCTCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: HKAHALTQVSNLVSQGGSRTRAS*SLAQGS
Trigger: GGAACCCTGAGCTAGGCTTCAGGAGGCCCGCGTCCT...GGAACCGCCTTGTGAGACCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp AAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATATAGGGGAGGGCACTTaGGGCCCAGGAAGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: KAVPLAIGQVCNPPQGGNIGEGT*GPGRSS
Trigger: GCTTGACCTTCCTGGGCCTCAAGTGCCCTCCCCTAT...ATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR TCA 90 bp GCACATGCACTGACCCAGGTCAGCAATTTGGTCTCACAAGGCGGTTCCTTTGGCATAGGGGAGGGCACTTaGGGCCCAGGAAGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: AHALTQVSNLVSQGGSFGIGEGT*GPGRSS
Trigger: GCTTGACCTTCCTGGGCCTCAAGTGCCCTCCCCTAT...GCCAAAGGAACCGCCTTGTGAGACCAAATTGCTGACCTGGGTCAGTGCATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR GCA 90 bp CCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAGAGCGGCTGCCGAACTaGCATGGGCGCCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PQGGNSLHGIVQSSEKSPERLPN*HGRQAA
Trigger: AGCGGCCTGGCGCCCATGGCAGTTCGGCAGCCGCTC...TGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp AAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATGGGACCATCTTTGAGTaGGCGAGTTGCCGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: KAVPLAIGQVCNPPQGGNGTIFE*ASCRSP
Trigger: CGGAGAGCGGCAACTCGCGCACTCAAAGATGGTCCC...ATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp GTATCACAATCAGCACTGGGGCCTGTAGCTGAAGGCAGAGTGGCCTTCAGGGACGCACGTGCATCTCTTTaGCCAGGACACAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VSQSALGPVAEGRVAFRDARASL*PGHRAG
Trigger: GCCTGCTCTGTGTCCTGGCCAAAGAGATGCACGTGC...GTCCCTGAAGGCCACTCTGCCTTCAGCTACAGGCCCCAGTGCTGATTGTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR CAA 72 bp ATGCTGTCCATCCCTTCATTTGATAGGGGAGGGCACTaGAGGCCCAGGAAGGTCAAGCGTCGGACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: MLSIPSFDRGGH*RPRKVKRRTWG
Trigger: ACCCCAGGTCCGACGCTTGACCTTCCTGGGCCTCAAGTGCCCTCCCCTATCAAATGAAGGGATGGACAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp GCAATTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCAGGGCAGGCGGTCGGCTaGACAGCGGAATCCCAGATT +
Preference number: 4 (lower is better)
Translates to: AIWSHKAVPLAIGQVCNPGQAVG*TAESQI
Trigger: AATCTGGGATTCCGCTGTGCAGCCGACCGCCTGCCC...TGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGACCGGTCCCGGCCTCCTaGCTCCCTGCCGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: LFCGGDDALDISSKHQQRPVPAS*LPAAPH
Trigger: GTGTGGAGCGGCAGGGAGCCAGGAGGCCGGGACCGG...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GTATCACAATCAGCACTGGGGCCTGTAGCTGAAGGCAGAGTGGCCTTCAGGGACGGACACATGGAGAACTaGATGATCCGGCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: VSQSALGPVAEGRVAFRDGHMEN*MIRPVQ
Trigger: CTGCACAGGCCGGATCATCCAGTTCTCCATGTGTCC...GTCCCTGAAGGCCACTCTGCCTTCAGCTACAGGCCCCAGTGCTGATTGTGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp CCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCACCCACTCAGCTTCCGTaGGCAGCCGCTTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PQGGNSLHGIVQSSEKSPPTQLP*AAASLP
Trigger: GGGCAGGGAAGCGGCTGCCCACGGAAGCTGAGTGGG...TGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR CCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCCCCACTCAGCTTCCGTaGGCAGCCGCTTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSPTQLP*AAASLP
Trigger: GGGCAGGGAAGCGGCTGCCCACGGAAGCTGAGTGGG...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GTATCACAATCAGCACTGGGGCCTGTAGCTGAAGGCAGAGTGGCCTTCAGGGACCCACACAGTGGAGTCTaGGTCCATCTTGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: VSQSALGPVAEGRVAFRDPHSGV*VHLASW
Trigger: CCATGAGGCAAGATGGACCCAGACTCCACTGTGTGG...GTCCCTGAAGGCCACTCTGCCTTCAGCTACAGGCCCCAGTGCTGATTGTGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp CACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCAGGACGCGGGCCTCCTaGAGCCTAGCTCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: HLRVGILCMGSFKVLRKARTRAS*SLAQGS
Trigger: GGAACCCTGAGCTAGGCTTCAGGAGGCCCGCGTCCT...GGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp GTATCACAATCAGCACTGGGGCCTGTAGCTGAAGGCAGAGTGGCCTTCAGGGACTCCTTCAGGAAGAACTaGAGCCTGAGAGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VSQSALGPVAEGRVAFRDSFRKN*SLRGRG
Trigger: TCCTCTGCCTCTCAGGCTTCAGTTCTTCCTGAAGGA...GTCCCTGAAGGCCACTCTGCCTTCAGCTACAGGCCCCAGTGCTGATTGTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp CAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGGGCCTCCTGGCTCCCTaGCGCTCCACACAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: QGGNSLHGIVQSSEKSPMGLLAP*RSTQQR
Trigger: TCGCTGCTGTGTGGAGCGGCAGGGAGCCAGGAGGCC...CATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp AAAGATGCACCACACCATAAAGCACATGCACTGACCCAGGTCAGCAATTTGGTCGTATCGGTGAGCGGCTaGCGAACTGCCATGGGCGCC +
Preference number: 4 (lower is better)
Translates to: KDAPHHKAHALTQVSNLVVSVSG*RTAMGA
Trigger: GGCGCCCATGGCAGTTCGGCAGCCGCTCACCGATAC...GACCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTATGGTGTGGTGCATCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp AAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATCATCCTCACCAGTGTTaGTCACCGGAAACTCGCCCT +
Preference number: 4 (lower is better)
Translates to: KAVPLAIGQVCNPPQGGNHPHQC*SPETRP
Trigger: AGGGCGAGTTTCCGGTGACCAACACTGGTGAGGATG...ATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR TCA 90 bp AACCCACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAATCCCGCGAGTATCGGTaGGCGGCTGCCGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: NPPQGGNSLHGIVQSSEKSREYR*AAAELP
Trigger: TGGCAGTTCGGCAGCCGCTCACCGATACTCGCGGGA...TTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCGGTCTCCTGACCTTGTaGTCTGCCCGCCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSGLLTL*SARLCL
Trigger: GAGGCAGAGGCGGGCAGATCACAAGGTCAGGAGACC...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp GTATGTAACCCACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGTATCGGTGAGCGGCTaGCGAACTGCCATGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VCNPPQGGNSLHGIVQSSVSVSG*RTAMGA
Trigger: GGCGCCCATGGCAGTTCGGCAGCCGCTCACCGATAC...AGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTGGGTTACATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp CACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCTTTGAGTGCGCGAGTTaGCGCTCTCCGGGTACGGGG +
Preference number: 4 (lower is better)
Translates to: HLRVGILCMGSFKVLRKAFECAS*RSPGTG
Trigger: CCCCGTACCCGGAGAGCGGCAACTCGCGCACTCAAA...GGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp GTATCACAATCAGCACTGGGGCCTGTAGCTGAAGGCAGAGTGGCCTTCAGGGACAACTCTCCTCGCAGGTaGTTCCCCATCCTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: VSQSALGPVAEGRVAFRDNSPRR*FPILLY
Trigger: ATAAAGCAGGATGGGGAAGCACCTGCGAGGAGAGTT...GTCCCTGAAGGCCACTCTGCCTTCAGCTACAGGCCCCAGTGCTGATTGTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp TTAGCGCACATTTCACGTTCGCTGAAGGCTTTGGGGAGAGGGGGAAACAGAGCTCTATCAGGTGTGTTCTaGCTCCGAGCAGCACAGCGA +
Preference number: 4 (lower is better)
Translates to: LAHISRSLKALGRGGNRALSGVF*LRAAQR
Trigger: TCGCTGTGCTGCTCGGAGCCAGAACACACCTGATAG...AGCTCTGTTTCCCCCTCTCCCCAAAGCCTTCAGCGAACGTGAAATGTGCGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CCA 90 bp GGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGGGGAAGACTTTCCTTaGTTGTCAGTCCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: GLTRRFLWPLGRYVTHLRGEDFP*LSVHSG
Trigger: CCCACTATGGACTGACAACCAAGGAAAGTCTTCCCC...CCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp AGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGTTCCCGCGAGTATCGGTaGGCGGCTGCCGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: RVGILCMGSFKVLRKAQCSREYR*AAAELP
Trigger: TGGCAGTTCGGCAGCCGCTCACCGATACTCGCGGGA...ACATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp AAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATAACAGTCCACCAGTCTaGAGTCCATTCCCATGCGTT +
Preference number: 4 (lower is better)
Translates to: KAVPLAIGQVCNPPQGGNNSPPV*SPFPCV
Trigger: AACGCATGGGAATGGACTTCAGACTGGTGGACTGTT...ATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp CAATTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACACATTTCACGTTCGCTaGAGGCTTTGGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: QFGLTRRFLWPLGRYVTHTFHVR*RLWGEG
Trigger: CCCCTCTCCCCAAAGCCTTCAGCGAACGTGAAATGT...GTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp ATACGTTTATTCAACACAGTGCATGATTCAAAGCATCGGATATTCCACAGCCAACAGGCCGCTGGGGCGTaGCGCAGCCGCAAGAACCCG +
Preference number: 4 (lower is better)
Translates to: IRLFNTVHDSKHRIFHSQQAAGA*RSRKNP
Trigger: CGGGTTCTTGCGGCTGCGGCACGCCCCAGCGGCCTG...TTGGCTGTGGAATATCCGATGCTTTGAATCATGCACTGTGTTGAATAAACGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp CAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGTTTGAGTGCGCGAGTTaGCGCTCTCCGGGTACGGGG +
Preference number: 4 (lower is better)
Translates to: QGGNSLHGIVQSSEKSPMFECAS*RSPGTG
Trigger: CCCCGTACCCGGAGAGCGGCAACTCGCGCACTCAAA...CATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp TTCAAAGTTCTGAGAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTTTTGAGTGCGCGAGTTaGCGCTCTCCGGGTACGGGG +
Preference number: 4 (lower is better)
Translates to: FKVLRKAQCRSDTTAPWTFECAS*RSPGTG
Trigger: CCCCGTACCCGGAGAGCGGCAACTCGCGCACTCAAA...AGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTCTCAGAACTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp AAAGATGCACCACACCATAAAGCACATGCACTGACCCAGGTCAGCAATTTGGTCGGGACCATCTTTGAGTaGGCGAGTTGCCGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: KDAPHHKAHALTQVSNLVGTIFE*ASCRSP
Trigger: CGGAGAGCGGCAACTCGCGCACTCAAAGATGGTCCC...GACCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTATGGTGTGGTGCATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp GTATGTAACCCACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGGGCAGCCGCTTCCCTaGCCAAGTGCAGTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: VCNPPQGGNSLHGIVQSSGQPLP*PSAVGN
Trigger: GTTGCCTACTGCACTTGGGCAGGGAAGCGGCTGCCC...AGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTGGGTTACATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR GCA 90 bp GTATGTAACCCACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGGGCAGGCGGTCGGCTaGACAGCGGAATCCCAGATT +
Preference number: 4 (lower is better)
Translates to: VCNPPQGGNSLHGIVQSSGQAVG*TAESQI
Trigger: AATCTGGGATTCCGCTGTGCAGCCGACCGCCTGCCC...AGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTGGGTTACATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp GAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTGGGGAAGACTTTCGGACACATGGAGAACTaGATGATCCGGCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: EKPNVGQTRLLLGLGKTFGHMEN*MIRPVQ
Trigger: CTGCACAGGCCGGATCATCCAGTTCTCCATGTGTCC...GAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR CCA 90 bp CATAAAGCACATGCACTGACCCAGGTCAGCAATTTGGTCTCACAAGGCGGTTCCCTATCAGGTGTGTTCTaGCTCCGAGCAGCACAGCGA +
Preference number: 4 (lower is better)
Translates to: HKAHALTQVSNLVSQGGSLSGVF*LRAAQR
Trigger: TCGCTGTGCTGCTCGGAGCCAGAACACACCTGATAG...GGAACCGCCTTGTGAGACCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp GCACATGCACTGACCCAGGTCAGCAATTTGGTCTCACAAGGCGGTTCCTTTGGCGGGGAAGACTTTCCTTaGTTGTCAGTCCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: AHALTQVSNLVSQGGSFGGEDFP*LSVHSG
Trigger: CCCACTATGGACTGACAACCAAGGAAAGTCTTCCCC...GCCAAAGGAACCGCCTTGTGAGACCAAATTGCTGACCTGGGTCAGTGCATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp AAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATGGGGAAGACTTTCCTTaGTTGTCAGTCCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: KAVPLAIGQVCNPPQGGNGEDFP*LSVHSG
Trigger: CCCACTATGGACTGACAACCAAGGAAAGTCTTCCCC...ATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp CGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTTGACACGACTGCTCCTTaGACTGGGGAAGACTTTCCT +
Preference number: 4 (lower is better)
Translates to: RFLWPLGRYVTHLRVGILDTTAP*TGEDFP
Trigger: AGGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTC...AAGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp TTAGCGCACATTTCACGTTCGCTGAAGGCTTTGGGGAGAGGGGGAAACAGAGCTCCCAGGTCAGCAATTTaGTCTCACAAGGCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: LAHISRSLKALGRGGNRAPRSAI*SHKAVP
Trigger: AGGAACCGCCTTGTGAGACCAAATTGCTGACCTGGG...AGCTCTGTTTCCCCCTCTCCCCAAAGCCTTCAGCGAACGTGAAATGTGCGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR TCA 90 bp GCACATGCACTGACCCAGGTCAGCAATTTGGTCTCACAAGGCGGTTCCTTTGGCCCATCCTGCTTTATCTaGGGATCATCTGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: AHALTQVSNLVSQGGSFGPSCFI*GSSVPI
Trigger: AATGGGCACAGATGATCCTCAGATAAAGCAGGATGG...GCCAAAGGAACCGCCTTGTGAGACCAAATTGCTGACCTGGGTCAGTGCATGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp TTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCACATGGAGAACTGGATaGTCCGGCCTGTGCAGAATA +
Preference number: 4 (lower is better)
Translates to: FGLTRRFLWPLGRYVTHLTWRTG*SGLCRI
Trigger: TATTCTGCACAGGCCGGATCATCCAGTTCTCCATGT...GAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR GCA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATGAGCGGCTGCCGAACTaGCATGGGCGCCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHERLPN*HGRQAA
Trigger: AGCGGCCTGGCGCCCATGGCAGTTCGGCAGCCGCTC...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGATTTGAGTGCGCGAGTTaGCGCTCTCCGGGTACGGGG +
Preference number: 4 (lower is better)
Translates to: LFCGGDDALDISSKHQQRFECAS*RSPGTG
Trigger: CCCCGTACCCGGAGAGCGGCAACTCGCGCACTCAAA...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp AGCGCACATTTCACGTTCGCTGAAGGCTTTGGGGAGAGGGGGAAACAGAGCTTAGGGAAAAGTCTATTATaGAGGCCTCCTCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: SAHFTFAEGFGERGKQSLGKSLL*RPPRQL
Trigger: CAGCTGTCGAGGAGGCCTGCATAATAGACTTTTCCC...TAAGCTCTGTTTCCCCCTCTCCCCAAAGCCTTCAGCGAACGTGAAATGTGCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp AGCGCACATTTCACGTTCGCTGAAGGCTTTGGGGAGAGGGGGAAACAGAGCTTATGGGCTGCAGTTTGTTaGCCCAGGGGAAAAGTCTAT +
Preference number: 4 (lower is better)
Translates to: SAHFTFAEGFGERGKQSLWAAVC*PRGKVY
Trigger: ATAGACTTTTCCCCTGGGGCAACAAACTGCAGCCCA...TAAGCTCTGTTTCCCCCTCTCCCCAAAGCCTTCAGCGAACGTGAAATGTGCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp GAAGTCACAATAGAATCTGATACCCTTTTTAGAACTGGTGAGTTGGAGAGACACCCCTGTGGCAGAGCCTaGGTAGGACGCGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: EVTIESDTLFRTGELERHPCGRA*VGRGPP
Trigger: AGGAGGCCCGCGTCCTACGCAGGCTCTGCCACAGGG...GTGTCTCTCCAACTCACCAGTTCTAAAAAGGGTATCAGATTCTATTGTGACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCCGTGCTGAGCCACCGTaGCCAGCCTTGTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSRAEPP*PALSTF
Trigger: AAAGGTAGACAAGGCTGGGCACGGTGGCTCAGCACG...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp GGAAGAGAAGGGTTGGATTTTGAAGGCAGCCACTTGATACTGGGGAGTTTGCAATTGCCCAGGCTGGAGTaGAGTGGTGCAGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: GREGLDFEGSHLILGSLQLPRLE*SGAAHY
Trigger: GTAGTGAGCTGCACCACTGCACTCCAGCCTGGGCAA...TTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAAAATCCAACCCTTCTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GCAATTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCAATACTCCAGCAGGGATaGGGACCATCTTTGAGTGCG +
Preference number: 4 (lower is better)
Translates to: AIWSHKAVPLAIGQVCNPILQQG*GPSLSA
Trigger: CGCACTCAAAGATGGTCCCCATCCCTGCTGGAGTAT...TGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp GCAATTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCAGACACGACTGCTCCTTaGACTGGGGAAGACTTTCCT +
Preference number: 4 (lower is better)
Translates to: AIWSHKAVPLAIGQVCNPDTTAP*TGEDFP
Trigger: AGGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTC...TGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp GCAATTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCCAGGTCAGCAATTTaGTCTCACAAGGCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: AIWSHKAVPLAIGQVCNPPRSAI*SHKAVP
Trigger: AGGAACCGCCTTGTGAGACCAAATTGCTGACCTGGG...TGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp CAATTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACACATGGAGAACTGGATaGTCCGGCCTGTGCAGAATA +
Preference number: 4 (lower is better)
Translates to: QFGLTRRFLWPLGRYVTHTWRTG*SGLCRI
Trigger: TATTCTGCACAGGCCGGATCATCCAGTTCTCCATGT...GTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR TCA 90 bp TTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCATAAAGCACATGCACTaGCCCAGGTCAGCAATTTGG +
Preference number: 4 (lower is better)
Translates to: FGLTRRFLWPLGRYVTHLIKHMH*PRSAIW
Trigger: CCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTAT...GAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAACTGGGGCCTGTAGCTaGAGGCAGAGTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LFCGGDDALDISSKHQQRTGACS*RQSGLQ
Trigger: CTGAAGGCCACTCTGCCTTCAGCTACAGGCCCCAGT...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCGGGGAGTTTGCAAGTTaGGCCTTCCTGAGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSGEFAS*AFLSPS
Trigger: GGAAGGACTCAGGAAGGCTCAACTTGCAAACTCCCC...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp GGAAGAGAAGGGTTGGATTTTGAAGGCAGCCACTTGATACTGGGGAGTTTGCAAAGAGCCACAACCCAGTaGGAGAGCACGTGCATCTCT +
Preference number: 4 (lower is better)
Translates to: GREGLDFEGSHLILGSLQRATTQ*ESTCIS
Trigger: AGAGATGCACGTGCTCTCTCACTGGGTTGTGGCTCT...TTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAAAATCCAACCCTTCTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAATGGTCTCGGTCTCCTaGCCTTGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LFCGGDDALDISSKHQQRMVSVS*PCDLPA
Trigger: GGCGGGCAGATCACAAGGTCAGGAGACCGAGACCAT...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp GCAATTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCAGGGAAAAGTCTATTATaGAGGCCTCCTCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: AIWSHKAVPLAIGQVCNPGKSLL*RPPRQL
Trigger: CAGCTGTCGAGGAGGCCTGCATAATAGACTTTTCCC...TGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR CCA 90 bp TTCAAAGTTCTGAGAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTAGAGTCAGGCCCTTCTaGGTGTCTCCAGTTAGCGCC +
Preference number: 4 (lower is better)
Translates to: FKVLRKAQCRSDTTAPWTRVRPF*VSPVSA
Trigger: GGCGCTAACTGGAGACACCCAGAAGGGCCTGACTCT...AGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTCTCAGAACTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR CCA 90 bp GCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTAGAAGGGGGACCTTTTaGGTTAAGCGTTTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: AVPLAIGQVCNPPQGGNSRRGTF*VKRFFN
Trigger: GTTGAAGAAACGCTTAACCCAAAAGGTCCCCCTTCT...AGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCCAGGCTGGAGTGCAGTaGTGCAGCTCACTACAAGCT +
Preference number: 4 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSQAGVQ*CSSLQA
Trigger: AGCTTGTAGTGAGCTGCACCACTGCACTCCAGCCTG...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp TTCCTTGGAAAAACAAAGTGCAGTACGAATATAAAGGAGTCACCACACCCCTCTGATGGGGACCATCTTTaGGTGCGCGAGTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: FLGKTKCSTNIKESPHPSDGDHL*VRELPL
Trigger: GAGCGGCAACTCGCGCACTCAAAGATGGTCCCCATC...AGAGGGGTGTGGTGACTCCTTTATATTCGTACTGCACTTTGTTTTTCCAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR TCA 90 bp GAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTGGGGAAGACTTTCCCATCCTGCTTTATCTaGGGATCATCTGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: EKPNVGQTRLLLGLGKTFPSCFI*GSSVPI
Trigger: AATGGGCACAGATGATCCTCAGATAAAGCAGGATGG...GAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAGGCCTGAGTCCACTATaGATCCACCCTGGGGAACCT +
Preference number: 4 (lower is better)
Translates to: LFCGGDDALDISSKHQQRGLSPL*IHPGEP
Trigger: AGGTTCCCCAGGGTGGATTCATAGTGGACTCAGGCC...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp AAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATAGGGTGGGAATTCTTTaGATGGGATCGTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: KAVPLAIGQVCNPPQGGNRVGIL*MGSFKV
Trigger: AACTTTGAACGATCCCATGCAAAGAATTCCCACCCT...ATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp CAATTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACAACAGAGCTTATGACTaGCCCTCTGAACCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: QFGLTRRFLWPLGRYVTHNRAYD*PSEPKA
Trigger: TGCCTTTGGTTCAGAGGGGCAGTCATAAGCTCTGTT...GTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp TTCAAAGTTCTGAGAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTCCACCAGGGAGCAGCTaGAACCTCTGTCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: FKVLRKAQCRSDTTAPWTPPGSS*NLCQIA
Trigger: GGCTATTTGACAGAGGTTGCAGCTGCTCCCTGGTGG...AGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTCTCAGAACTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383843.9
CDS-3UTR GCA 90 bp GGAAGAGAAGGGTTGGATTTTGAAGGCAGCCACTTGATACTGGGGAGTTTGCAAAGAAGGCCTTCCACCTaGTGGCTGTGTGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GREGLDFEGSHLILGSLQRRPST*WLCVFS
Trigger: TGAGAAGACACACAGCCAGCAGGTGGAAGGCCTTCT...TTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAAAATCCAACCCTTCTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCATACTCCAGCAGGGATaGGGACCATCTTTGAGTGCG +
Preference number: 4 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSILQQG*GPSLSA
Trigger: CGCACTCAAAGATGGTCCCCATCCCTGCTGGAGTAT...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAAGAGTCAGGCCCTTCTaGGTGTCTCCAGTTAGCGCC +
Preference number: 4 (lower is better)
Translates to: LFCGGDDALDISSKHQQRRVRPF*VSPVSA
Trigger: GGCGCTAACTGGAGACACCCAGAAGGGCCTGACTCT...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp CACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCATAATGCTGGCCTTTaGGCTGCAGTTTGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: HLRVGILCMGSFKVLRKAHNAGL*AAVCCP
Trigger: GGGGCAACAAACTGCAGCCCAAAGGCCAGCATTATG...GGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR CCA 90 bp TTCAAAGTTCTGAGAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTCTATCAGGTGTGTTCTaGCTCCGAGCAGCACAGCGA +
Preference number: 4 (lower is better)
Translates to: FKVLRKAQCRSDTTAPWTLSGVF*LRAAQR
Trigger: TCGCTGTGCTGCTCGGAGCCAGAACACACCTGATAG...AGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTCTCAGAACTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp CCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAGACACGACTGCTCCTTaGACTGGGGAAGACTTTCCT +
Preference number: 4 (lower is better)
Translates to: PQGGNSLHGIVQSSEKSPDTTAP*TGEDFP
Trigger: AGGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTC...TGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCAGAGGCAGAGGACTCTaGAACGTCTGGAGGGCATTT +
Preference number: 4 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSRGRGL*NVWRAF
Trigger: AAATGCCCTCCAGACGTTCCAGAGTCCTCTGCCTCT...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
3UTR CAA 72 bp GGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTTaGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GQVCNPPQGGNS*HGIVQSSEKSP
Trigger: TGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTGGGTTACATACCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp GGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGTGTCAAATAGCCAGTTaGGTTCACAAACTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: GLTRRFLWPLGRYVTHLRCQIAS*VHKLLK
Trigger: TTTGAGAAGTTTGTGAACTCAACTGGCTATTTGACA...CCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp GTATCACAATCAGCACTGGGGCCTGTAGCTGAAGGCAGAGTGGCCTTCAGGGACTGTCAAATAGCCAGTTaGGTTCACAAACTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: VSQSALGPVAEGRVAFRDCQIAS*VHKLLK
Trigger: TTTGAGAAGTTTGTGAACTCAACTGGCTATTTGACA...GTCCCTGAAGGCCACTCTGCCTTCAGCTACAGGCCCCAGTGCTGATTGTGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp AAAGATGCACCACACCATAAAGCACATGCACTGACCCAGGTCAGCAATTTGGTCAACAGTCCACCAGTCTaGAGTCCATTCCCATGCGTT +
Preference number: 4 (lower is better)
Translates to: KDAPHHKAHALTQVSNLVNSPPV*SPFPCV
Trigger: AACGCATGGGAATGGACTTCAGACTGGTGGACTGTT...GACCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTATGGTGTGGTGCATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCAACAGTCCACCAGTCTaGAGTCCATTCCCATGCGTT +
Preference number: 4 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSNSPPV*SPFPCV
Trigger: AACGCATGGGAATGGACTTCAGACTGGTGGACTGTT...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp AGCTCATTCAAGGTCCTCGTTCCTTTTTCCCTATATCTAGAATTAAACAGGTTTAGGACGCGGGCCTCCTaGAGCCTAGCTCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SSFKVLVPFSLYLELNRFRTRAS*SLAQGS
Trigger: GGAACCCTGAGCTAGGCTTCAGGAGGCCCGCGTCCT...AAACCTGTTTAATTCTAGATATAGGGAAAAAGGAACGAGGACCTTGAATGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR TCA 90 bp GCAATTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCATATGTGTTCAACGGCTaGACTTCAGCATACCATCAC +
Preference number: 4 (lower is better)
Translates to: AIWSHKAVPLAIGQVCNPYVFNG*TSAYHH
Trigger: GTGATGGTATGCTGAAGTTCAGCCGTTGAACACATA...TGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR TCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCTTGAAGGCAGCCACTTaGTACTGGGGAGTTTGCAAG +
Preference number: 4 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSLKAAT*YWGVCK
Trigger: CTTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAA...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp GTCACCCCACAGACATTCCTATGTGTTCAACGGCTGAACTTCAGCATACCATCAAACTCTCCTCGCAGGTaGTTCCCCATCCTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: VTPQTFLCVQRLNFSIPSNSPRR*FPILLY
Trigger: ATAAAGCAGGATGGGGAAGCACCTGCGAGGAGAGTT...TGATGGTATGCTGAAGTTCAGCCGTTGAACACATAGGAATGTCTGTGGGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp CGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTTCTTGCTCACTCAACATaGCTTCAAAGACAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: RFLWPLGRYVTHLRVGILLAHST*LQRQRS
Trigger: ACTCCTTTGTCTTTGAAGGCATGTTGAGTGAGCAAG...AAGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp CACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCCACCAGGGAGCAGCTaGAACTGCCTGTTGAATATT +
Preference number: 4 (lower is better)
Translates to: HLRVGILCMGSFKVLRKAPPGSS*NCLLNI
Trigger: AATATTCAACAGGCAGTTGCAGCTGCTCCCTGGTGG...GGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCCCACCAGGGAGCAGCTaGAACTGCCTGTTGAATATT +
Preference number: 4 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSPPGSS*NCLLNI
Trigger: AATATTCAACAGGCAGTTGCAGCTGCTCCCTGGTGG...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp GGAAGAGAAGGGTTGGATTTTGAAGGCAGCCACTTGATACTGGGGAGTTTGCAAGGGAAAAGTCTATTATaGAGGCCTCCTCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: GREGLDFEGSHLILGSLQGKSLL*RPPRQL
Trigger: CAGCTGTCGAGGAGGCCTGCATAATAGACTTTTCCC...TTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAAAATCCAACCCTTCTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp GGAAGAGAAGGGTTGGATTTTGAAGGCAGCCACTTGATACTGGGGAGTTTGCAATGGGCTGCAGTTTGTTaGCCCAGGGGAAAAGTCTAT +
Preference number: 4 (lower is better)
Translates to: GREGLDFEGSHLILGSLQWAAVC*PRGKVY
Trigger: ATAGACTTTTCCCCTGGGGCAACAAACTGCAGCCCA...TTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAAAATCCAACCCTTCTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCGGGAGAAGAAGACTTTaGTGTGCACCCAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSGRRRL*CAPKVT
Trigger: TGTGACCTTGGGTGCACAGCAAAGTCTTCTTCTCCC...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAGCTGGAGTGCAGTGGTaGAGCTCACTACAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LFCGGDDALDISSKHQQRAGVQW*SSLQAP
Trigger: TGGAGCTTGTAGTGAGCTGCACCACTGCACTCCAGC...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GTATGTAACCCACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTATACTCCAGCAGGGATaGGGACCATCTTTGAGTGCG +
Preference number: 4 (lower is better)
Translates to: VCNPPQGGNSLHGIVQSSILQQG*GPSLSA
Trigger: CGCACTCAAAGATGGTCCCCATCCCTGCTGGAGTAT...AGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTGGGTTACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp AGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGTCATCCTCACCAGTGTTaGTCACCGGAAACTCGCCCT +
Preference number: 4 (lower is better)
Translates to: RVGILCMGSFKVLRKAQCHPHQC*SPETRP
Trigger: AGGGCGAGTTTCCGGTGACCAACACTGGTGAGGATG...ACATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR CCA 90 bp GAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTGGGGAAGACTTTCATAAGCCATAACCATTaGGAGGGAAGGCATCAACAG +
Preference number: 4 (lower is better)
Translates to: EKPNVGQTRLLLGLGKTFISHNH*EGRHQQ
Trigger: CTGTTGATGCCTTCCCTCCCAATGGTTATGGCTTAT...GAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR CCA 90 bp GAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTGGGGAAGACTTTCAGAAGGGGGACCTTTTaGGTTAAGCGTTTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: EKPNVGQTRLLLGLGKTFRRGTF*VKRFFN
Trigger: GTTGAAGAAACGCTTAACCCAAAAGGTCCCCCTTCT...GAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAGGTCAGTCCACACAGTaGAGTCTGGGTCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: LFCGGDDALDISSKHQQRGQSTQ*SLGPSC
Trigger: GCAAGATGGACCCAGACTCCACTGTGTGGACTGACC...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GTATCACAATCAGCACTGGGGCCTGTAGCTGAAGGCAGAGTGGCCTTCAGGGACAATAGAAATTCCAGCTaGGTAATTCCAGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: VSQSALGPVAEGRVAFRDNRNSS*VIPGVT
Trigger: AGTAACTCCTGGAATTACCCAGCTGGAATTTCTATT...GTCCCTGAAGGCCACTCTGCCTTCAGCTACAGGCCCCAGTGCTGATTGTGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GCAATTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCAATAAGCCATAACCATTaGGAGGGAAGGCATCAACCT +
Preference number: 4 (lower is better)
Translates to: AIWSHKAVPLAIGQVCNPISHNH*EGRHQP
Trigger: AGGTTGATGCCTTCCCTCCCAATGGTTATGGCTTAT...TGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458465.6
3UTR CAA 72 bp AGAGGACTCTGGAACGTCTGGAGGGCATTTAGTCGTTaGTCCCATAGTCTGCTGGCAGTTCTGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RGLWNVWRAFSR*SHSLLAVLFSS
Trigger: AGAAGAAAACAGAACTGCCAGCAGACTATGGGACAAACGACTAAATGCCCTCCAGACGTTCCAGAGTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTTCCCGCGAGTATCGGTaGGCGGCTGCCGAACTGCCA +
Preference number: 4 (lower is better)
Translates to: ESLLLISPGNLYCISQGSSREYR*AAAELP
Trigger: TGGCAGTTCGGCAGCCGCTCACCGATACTCGCGGGA...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp GGAAGAGAAGGGTTGGATTTTGAAGGCAGCCACTTGATACTGGGGAGTTTGCAAGCTGCAACTGCCTGTTaGATATTGGTCTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: GREGLDFEGSHLILGSLQAATAC*ILVFTC
Trigger: GCAAGTGAAGACCAATATTCAACAGGCAGTTGCAGC...TTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAAAATCCAACCCTTCTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp CAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGAACAGTCCACCAGTCTaGAGTCCATTCCCATGCGTT +
Preference number: 4 (lower is better)
Translates to: QGGNSLHGIVQSSEKSPMNSPPV*SPFPCV
Trigger: AACGCATGGGAATGGACTTCAGACTGGTGGACTGTT...CATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp AAAGATGCACCACACCATAAAGCACATGCACTGACCCAGGTCAGCAATTTGGTCATAAAGCACATGCACTaGCCCAGGTCAGCAATTTGG +
Preference number: 4 (lower is better)
Translates to: KDAPHHKAHALTQVSNLVIKHMH*PRSAIW
Trigger: CCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTAT...GACCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTATGGTGTGGTGCATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp GTATGTAACCCACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTAACTCTCCTCGCAGGTaGTTCCCCATCCTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: VCNPPQGGNSLHGIVQSSNSPRR*FPILLY
Trigger: ATAAAGCAGGATGGGGAAGCACCTGCGAGGAGAGTT...AGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTGGGTTACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp AGCTCATTCAAGGTCCTCGTTCCTTTTTCCCTATATCTAGAATTAAACAGGTTTGGGCAGCCGCTTCCCTaGCCAAGTGCAGTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: SSFKVLVPFSLYLELNRFGQPLP*PSAVGN
Trigger: GTTGCCTACTGCACTTGGGCAGGGAAGCGGCTGCCC...AAACCTGTTTAATTCTAGATATAGGGAAAAAGGAACGAGGACCTTGAATGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp TTCAAAGTTCTGAGAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTTGGGCTGCAGTTTGTTaGCCCAGGGGAAAAGTCTAT +
Preference number: 4 (lower is better)
Translates to: FKVLRKAQCRSDTTAPWTWAAVC*PRGKVY
Trigger: ATAGACTTTTCCCCTGGGGCAACAAACTGCAGCCCA...AGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTCTCAGAACTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR GCA 90 bp TTCAAAGTTCTGAGAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTGACACCCAGAGGTCATaGTGTCCATCCCTTCATTTG +
Preference number: 4 (lower is better)
Translates to: FKVLRKAQCRSDTTAPWTDTQRS*CPSLHL
Trigger: CAAATGAAGGGATGGACAGCATGACCTCTGGGTGTC...AGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTCTCAGAACTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCCAGCAAATTGCTTCCTaGTTTCCAGCTCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSQQIAS*FPAPDS
Trigger: GGAATCTGGAGCTGGAAAGCAGGAAGCAATTTGCTG...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTGGGGAAGACTTTCCTGCCTGTTGAATATTaGTCTTCACTTGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: EKPNVGQTRLLLGLGKTFLPVEY*SSLAHS
Trigger: TGAGTGAGCAAGTGAAGACCAATATTCAACAGGCAG...GAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CCA 90 bp GAAGTCACAATAGAATCTGATACCCTTTTTAGAACTGGTGAGTTGGAGAGACACAGAGTCAGGCCCTTCTaGGTGTCTCCAGTTAGCGCC +
Preference number: 4 (lower is better)
Translates to: EVTIESDTLFRTGELERHRVRPF*VSPVSA
Trigger: GGCGCTAACTGGAGACACCCAGAAGGGCCTGACTCT...GTGTCTCTCCAACTCACCAGTTCTAAAAAGGGTATCAGATTCTATTGTGACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CCA 90 bp GATTTCCTTGGAAAAACAAAGTGCAGTACGAATATAAAGGAGTCACCACACCCCGGACACATGGAGAACTaGATGATCCGGCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: DFLGKTKCSTNIKESPHPGHMEN*MIRPVQ
Trigger: CTGCACAGGCCGGATCATCCAGTTCTCCATGTGTCC...GGGGTGTGGTGACTCCTTTATATTCGTACTGCACTTTGTTTTTCCAAGGAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CCA 90 bp AGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGTCATAATGCTGGCCTTTaGGCTGCAGTTTGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: RVGILCMGSFKVLRKAQCHNAGL*AAVCCP
Trigger: GGGGCAACAAACTGCAGCCCAAAGGCCAGCATTATG...ACATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR TCA 90 bp AGCGCACATTTCACGTTCGCTGAAGGCTTTGGGGAGAGGGGGAAACAGAGCTTACAAATTCAGTATTACTaGCTTCATAGGCATCCATGT +
Preference number: 4 (lower is better)
Translates to: SAHFTFAEGFGERGKQSLQIQYY*LHRHPC
Trigger: ACATGGATGCCTATGAAGTCAGTAATACTGAATTTG...TAAGCTCTGTTTCCCCCTCTCCCCAAAGCCTTCAGCGAACGTGAAATGTGCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR TCA 90 bp GGAAGAGAAGGGTTGGATTTTGAAGGCAGCCACTTGATACTGGGGAGTTTGCAAAGAAGGGTTGGATTTTaGAGGCAGCCACTTGATACT +
Preference number: 4 (lower is better)
Translates to: GREGLDFEGSHLILGSLQRRVGF*RQPLDT
Trigger: AGTATCAAGTGGCTGCCTTCAAAATCCAACCCTTCT...TTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAAAATCCAACCCTTCTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp AGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGTAACTCTCCTCGCAGGTaGTTCCCCATCCTGCTTTAT +
Preference number: 4 (lower is better)
Translates to: RVGILCMGSFKVLRKAQCNSPRR*FPILLY
Trigger: ATAAAGCAGGATGGGGAAGCACCTGCGAGGAGAGTT...ACATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTGGGCAGCCGCTTCCCTaGCCAAGTGCAGTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: ESLLLISPGNLYCISQGSGQPLP*PSAVGN
Trigger: GTTGCCTACTGCACTTGGGCAGGGAAGCGGCTGCCC...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATCCTGACCTTGTGATCTaGCCGCCTCTGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHPDLVI*PPLPPK
Trigger: TTTGGGAGGCAGAGGCGGGCAGATCACAAGGTCAGG...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GGAAGAGAAGGGTTGGATTTTGAAGGCAGCCACTTGATACTGGGGAGTTTGCAAAGAAGGGGGACCTTTTaGGTTAAGCGTTTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: GREGLDFEGSHLILGSLQRRGTF*VKRFFN
Trigger: GTTGAAGAAACGCTTAACCCAAAAGGTCCCCCTTCT...TTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAAAATCCAACCCTTCTCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp CCTTGGAAAAACAAAGTGCAGTACGAATATAAAGGAGTCACCACACCCCTCTTCCCATCCTGCTTTATCTaGGGATCATCTGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: PWKNKVQYEYKGVTTPLFPSCFI*GSSVPI
Trigger: AATGGGCACAGATGATCCTCAGATAAAGCAGGATGG...GAAGAGGGGTGTGGTGACTCCTTTATATTCGTACTGCACTTTGTTTTTCCAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR TCA 90 bp GAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTGGGGAAGACTTTCCAAATTCAGTATTACTaGCTTCATAGGCATCCATGT +
Preference number: 4 (lower is better)
Translates to: EKPNVGQTRLLLGLGKTFQIQYY*LHRHPC
Trigger: ACATGGATGCCTATGAAGTCAGTAATACTGAATTTG...GAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp AGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGTGCTGCAACTGCCTGTTaGATATTGGTCTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: RVGILCMGSFKVLRKAQCAATAC*ILVFTC
Trigger: GCAAGTGAAGACCAATATTCAACAGGCAGTTGCAGC...ACATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR TCA 90 bp AGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGTATAAAGCACATGCACTaGCCCAGGTCAGCAATTTGG +
Preference number: 4 (lower is better)
Translates to: RVGILCMGSFKVLRKAQCIKHMH*PRSAIW
Trigger: CCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTAT...ACATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATGGAAGAACTGAAGCCTaGGAGGCAGAGGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHGRTEA*EAEDSG
Trigger: TCCAGAGTCCTCTGCCTCTCAGGCTTCAGTTCTTCC...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTGGGACCATCTTTGAGTaGGCGAGTTGCCGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: ESLLLISPGNLYCISQGSGTIFE*ASCRSP
Trigger: CGGAGAGCGGCAACTCGCGCACTCAAAGATGGTCCC...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp CACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCAGGGTGGGAATTCTTTaGATGGGATCGTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: HLRVGILCMGSFKVLRKARVGIL*MGSFKV
Trigger: AACTTTGAACGATCCCATGCAAAGAATTCCCACCCT...GGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp TTCCTATGTGTTCAACGGCTGAACTTCAGCATACCATCACCGGCCCCATGTGGGCTTGGAAAAACAAAGTaGAGTACGAATATAAAGGAG +
Preference number: 4 (lower is better)
Translates to: FLCVQRLNFSIPSPAPCGLGKTK*STNIKE
Trigger: CTCCTTTATATTCGTACTGCACTTTGTTTTTCCAAG...CCCACATGGGGCCGGTGATGGTATGCTGAAGTTCAGCCGTTGAACACATAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp GAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTGGGGAAGACTTTCGTTTATTCAACACAGTaGATGATTCAAAGCATCGGA +
Preference number: 4 (lower is better)
Translates to: EKPNVGQTRLLLGLGKTFVYSTQ*MIQSIG
Trigger: TCCGATGCTTTGAATCATGCACTGTGTTGAATAAAC...GAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCGTTTGTCCCATAGTCTaGTGGCAGTTCTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSVCPIV*WQFCFL
Trigger: AAGAAAACAGAACTGCCAGCAGACTATGGGACAAAC...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp GGAAGAGAAGGGTTGGATTTTGAAGGCAGCCACTTGATACTGGGGAGTTTGCAAGATATAGGCAGCAGGTaGAGATATGAAATTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GREGLDFEGSHLILGSLQDIGSR*RYEICG
Trigger: ACCACAAATTTCATATCTTCACCTGCTGCCTATATC...TTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAAAATCCAACCCTTCTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCTCTCAACATCTCAGATaGCACATCTTGAAAATAGGG +
Preference number: 4 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSSQHLR*HILKIG
Trigger: CCCTATTTTCAAGATGTGGCATCTGAGATGTTGAGA...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAAATTCCACAGCAAATTaGTTCCTGCTTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LFCGGDDALDISSKHQQRNSTAN*FLLSSS
Trigger: GGAGCTGGAAAGCAGGAAGCAATTTGCTGTGGAATT...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAATAAGCCATAACCATTaGGAGGGAAGGCATCAACAG +
Preference number: 4 (lower is better)
Translates to: LFCGGDDALDISSKHQQRISHNH*EGRHQQ
Trigger: CTGTTGATGCCTTCCCTCCCAATGGTTATGGCTTAT...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATAGGCCTTCCACCTGCTaGCTGTGTGTCTTCTCAACA +
Preference number: 4 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHRPSTC*LCVFST
Trigger: TGTTGAGAAGACACACAGCCAGCAGGTGGAAGGCCT...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATACAGGAGGATCCTTCTaGGAGGTCAGTCCACACAGT +
Preference number: 4 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHTGGSF*EVSPHS
Trigger: ACTGTGTGGACTGACCTCCCAGAAGGATCCTCCTGT...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGATGTCCCATAGTCTGCTaGCAGTTCTGTTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LFCGGDDALDISSKHQQRCPIVC*QFCFLL
Trigger: GAGAAGAAAACAGAACTGCCAGCAGACTATGGGACA...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATACATGGAGAACTGGATaGTCCGGCCTGTGCAGAATA +
Preference number: 4 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHTWRTG*SGLCRI
Trigger: TATTCTGCACAGGCCGGATCATCCAGTTCTCCATGT...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp AGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGTGATCGTTCAAAGTTCTaGGAAAAGCCCAATGTAGGT +
Preference number: 4 (lower is better)
Translates to: RVGILCMGSFKVLRKAQCDRSKF*EKPNVG
Trigger: ACCTACATTGGGCTTTTCTCAGAACTTTGAACGATC...ACATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR GCA 90 bp AACCCACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAATATTGGTCTTCACTTaGTCACTCAACATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: NPPQGGNSLHGIVQSSEKILVFT*SLNMPS
Trigger: TGAAGGCATGTTGAGTGAGCAAGTGAAGACCAATAT...TTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR GCA 90 bp GGAAGAGAAGGGTTGGATTTTGAAGGCAGCCACTTGATACTGGGGAGTTTGCAATTTTTCCAGTGGAAGTaGAAAATACTCCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: GREGLDFEGSHLILGSLQFFQWK*KILPCH
Trigger: ATGACATGGGAGTATTTTGCACTTCCACTGGAAAAA...TTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAAAATCCAACCCTTCTCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp CCTGAATATAGCTCATTCAAGGTCCTCGTTCCTTTTTCCCTATATCTAGAATTAATACTCCAGCAGGGATaGGGACCATCTTTGAGTGCG +
Preference number: 4 (lower is better)
Translates to: PEYSSFKVLVPFSLYLELILQQG*GPSLSA
Trigger: CGCACTCAAAGATGGTCCCCATCCCTGCTGGAGTAT...TAATTCTAGATATAGGGAAAAAGGAACGAGGACCTTGAATGAGCTATATTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTCATCCTCACCAGTGTTaGTCACCGGAAACTCGCCCT +
Preference number: 4 (lower is better)
Translates to: ESLLLISPGNLYCISQGSHPHQC*SPETRP
Trigger: AGGGCGAGTTTCCGGTGACCAACACTGGTGAGGATG...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATCCATCCTGCTTTATCTaGGGATCATCTGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHPSCFI*GSSVPI
Trigger: AATGGGCACAGATGATCCTCAGATAAAGCAGGATGG...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp CAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGTGTCAAATAGCCAGTTaGGTTCACAAACTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: QGGNSLHGIVQSSEKSPMCQIAS*VHKLLK
Trigger: TTTGAGAAGTTTGTGAACTCAACTGGCTATTTGACA...CATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp TTCAAAGTTCTGAGAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTTGTCAAATAGCCAGTTaGGTTCACAAACTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: FKVLRKAQCRSDTTAPWTCQIAS*VHKLLK
Trigger: TTTGAGAAGTTTGTGAACTCAACTGGCTATTTGACA...AGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTCTCAGAACTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp GGAAACAGAGCTTATGACTGCCCCTCTGAACCAAAGGCACTTAATGTTAAAAGAGATCGTTCAAAGTTCTaGGAAAAGCCCAATGTAGGT +
Preference number: 4 (lower is better)
Translates to: GNRAYDCPSEPKALNVKRDRSKF*EKPNVG
Trigger: ACCTACATTGGGCTTTTCTCAGAACTTTGAACGATC...TCTTTTAACATTAAGTGCCTTTGGTTCAGAGGGGCAGTCATAAGCTCTGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR TCA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATCAAGTTGAGCCTTCCTaGGTCCTTCCCATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHQVEPS*VLPILS
Trigger: TGAAAGAATGGGAAGGACTCAGGAAGGCTCAACTTG...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTGCAGAGAATCTGGCCTaGGTCCACTATGAATCCACC +
Preference number: 4 (lower is better)
Translates to: ESLLLISPGNLYCISQGSAENLA*VHYEST
Trigger: GGTGGATTCATAGTGGACTCAGGCCAGATTCTCTGC...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAATATTGGTCTTCACTTaGTCACTCAACATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LFCGGDDALDISSKHQQRILVFT*SLNMPS
Trigger: TGAAGGCATGTTGAGTGAGCAAGTGAAGACCAATAT...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATAAGAAGACTTTGCTGTaGACCCAAGGTCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHKKTLL*TQGHRA
Trigger: AGCTCTGTGACCTTGGGTGCACAGCAAAGTCTTCTT...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTCATAATGCTGGCCTTTaGGCTGCAGTTTGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: ESLLLISPGNLYCISQGSHNAGL*AAVCCP
Trigger: GGGGCAACAAACTGCAGCCCAAAGGCCAGCATTATG...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GAAGTCACAATAGAATCTGATACCCTTTTTAGAACTGGTGAGTTGGAGAGACACATAAGCCATAACCATTaGGAGGGAAGGCATCAACAG +
Preference number: 4 (lower is better)
Translates to: EVTIESDTLFRTGELERHISHNH*EGRHQQ
Trigger: CTGTTGATGCCTTCCCTCCCAATGGTTATGGCTTAT...GTGTCTCTCCAACTCACCAGTTCTAAAAAGGGTATCAGATTCTATTGTGACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR TCA 90 bp AGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGTCAAATTCAGTATTACTaGCTTCATAGGCATCCATGT +
Preference number: 4 (lower is better)
Translates to: RVGILCMGSFKVLRKAQCQIQYY*LHRHPC
Trigger: ACATGGATGCCTATGAAGTCAGTAATACTGAATTTG...ACATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR TCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGACAAATTCAGTATTACTaGCTTCATAGGCATCCATGT +
Preference number: 4 (lower is better)
Translates to: LFCGGDDALDISSKHQQRQIQYY*LHRHPC
Trigger: ACATGGATGCCTATGAAGTCAGTAATACTGAATTTG...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAATAGTTAATAACCAGTaGGAAAATGGCCCATTGCTT +
Preference number: 4 (lower is better)
Translates to: LFCGGDDALDISSKHQQRIVNNQ*ENGPLL
Trigger: AAGCAATGGGCCATTTTCTCACTGGTTATTAACTAT...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATCAGCAGGTGAAGATATaGAATTTGTGGTCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHQQVKI*NLWSKG
Trigger: TCCTTTGGACCACAAATTTCATATCTTCACCTGCTG...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR GCA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATCTTGCTCACTCAACATaGCTTCAAAGACAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHLAHST*LQRQRS
Trigger: ACTCCTTTGTCTTTGAAGGCATGTTGAGTGAGCAAG...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp CCTGAATATAGCTCATTCAAGGTCCTCGTTCCTTTTTCCCTATATCTAGAATTAAGAAGGGGGACCTTTTaGGTTAAGCGTTTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: PEYSSFKVLVPFSLYLELRRGTF*VKRFFN
Trigger: GTTGAAGAAACGCTTAACCCAAAAGGTCCCCCTTCT...TAATTCTAGATATAGGGAAAAAGGAACGAGGACCTTGAATGAGCTATATTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTGTCCATCTTGCCTCATaGAGTAGCTACAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: ESLLLISPGNLYCISQGSVHLAS*SSYRQC
Trigger: ACATTGCCTGTAGCTACTCCATGAGGCAAGATGGAC...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTACTTTCCACTGTGAGTaGAGAACCAACTCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: ESLLLISPGNLYCISQGSTFHCE*RTNSSH
Trigger: GTGAGAGGAGTTGGTTCTCCACTCACAGTGGAAAGT...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATCTTGTTTCAGACATCTaGAAGCCCTTGTTAAGTATC +
Preference number: 4 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHLVSDI*KPLLSI
Trigger: GATACTTAACAAGGGCTTTCAGATGTCTGAAACAAG...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTCTTTTGTGGTGGAGATaGTGCTCTGGACATAAGTTC +
Preference number: 4 (lower is better)
Translates to: ESLLLISPGNLYCISQGSLLWWR*CSGHKF
Trigger: GAACTTATGTCCAGAGCATCATCTCCACCACAAAAG...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTCATCAGCAGAGAATCTaGCCTGAGTCCACTATGAAT +
Preference number: 4 (lower is better)
Translates to: ESLLLISPGNLYCISQGSHQQRI*PESTMN
Trigger: ATTCATAGTGGACTCAGGCCAGATTCTCTGCTGATG...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTAATACATACTGGAAATaGGCTGGGAAGAGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: ESLLLISPGNLYCISQGSNTYWK*AGKRRV
Trigger: AACCCTTCTCTTCCCAGCTCATTTCCAGTATGTATT...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR TCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTTTCCATCTTTTAGCATaGTATAGGCAGCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ESLLLISPGNLYCISQGSFHLLA*YRQQVK
Trigger: CTTCACCTGCTGCCTATATCATGCTAAAAGATGGAA...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CCA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTCTGCCTGTTGAATATTaGTCTTCACTTGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: ESLLLISPGNLYCISQGSLPVEY*SSLAHS
Trigger: TGAGTGAGCAAGTGAAGACCAATATTCAACAGGCAG...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS GCA 90 bp GGTGAGCGGCTGCCGAACTGCCATGGGCGCCAGGCCGCTGGGGCGTaGCGCAGCCGCAAGAACCCGCAAGGGACCCCGCGCCCGCACCGG +
Preference number: 5 (lower is better)
Translates to: GERLPNCHGRQAAGA*RSRKNPQGTPRPHR
Trigger: CCGGTGCGGGCGCGGGGTCCCTTGCGGGTTCTTGCGGCTGCGGCACGCCCCAGCGGCCTGGCGCCCATGGCAGTTCGGCAGCCGCTCACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
ENST00000458465.6
CDS GCA 90 bp TACGGGGCCCGGAGCGTTAGCCTCCCGCGAGTATCGGTGAGCGGCTaGCGAACTGCCATGGGCGCCAGGCCGCTGGGGCGTGCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: YGARSVSLPRVSVSG*RTAMGARPLGRAAA
Trigger: GGCTGCGGCACGCCCCAGCGGCCTGGCGCCCATGGCAGTTCGGCAGCCGCTCACCGATACTCGCGGGAGGCTAACGCTCCGGGCCCCGTA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
ENST00000458465.6
CDS TCA 90 bp TCTCCGGGTACGGGGCCCGGAGCGTTAGCCTCCCGCGAGTATCGGTaGGCGGCTGCCGAACTGCCATGGGCGCCAGGCCGCTGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: SPGTGPGALASREYR*AAAELPWAPGRWGV
Trigger: CACGCCCCAGCGGCCTGGCGCCCATGGCAGTTCGGCAGCCGCTCACCGATACTCGCGGGAGGCTAACGCTCCGGGCCCCGTACCCGGAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
ENST00000458465.6
CDS CCA 90 bp CAAGAACCCGCAAGGGACCCCGCGCCCGCACCGGTCCCGGCCTCCTaGCTCCCTGCCGCTCCACACAGCAGCGAGAGCAGCAGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: QEPARDPAPAPVPAS*LPAAPHSSESSSSK
Trigger: CTTGCTGCTGCTGCTCTCGCTGCTGTGTGGAGCGGCAGGGAGCCAGGAGGCCGGGACCGGTGCGGGCGCGGGGTCCCTTGCGGGTTCTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
ENST00000458465.6
CDS GCA 90 bp GGCTTAGTTTCTTTATCTGTGTCGCCGCCTAGTCTCCGGTCTTGGTaGTCTCCCGGGGGTGCCCCAAGGAGCCAGTGCGCGCTGCGGGCT +
Preference number: 5 (lower is better)
Translates to: GLVSLSVSPPSLRSW*SPGGAPRSQCALRA
Trigger: AGCCCGCAGCGCGCACTGGCTCCTTGGGGCACCCCCGGGAGAGCACCAAGACCGGAGACTAGGCGGCGACACAGATAAAGAAACTAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469888.1
CDS CCA 90 bp TATTATGCAGGCCTCCTCGACAGCTGTATTCCCACTCAGCTTCCGTaGGCAGCCGCTTCCCTGCCCAAGTGCAGTAGGCAACCGCATCAT +
Preference number: 5 (lower is better)
Translates to: YYAGLLDSCIPTQLP*AAASLPKCSRQPHH
Trigger: ATGATGCGGTTGCCTACTGCACTTGGGCAGGGAAGCGGCTGCCCACGGAAGCTGAGTGGGAATACAGCTGTCGAGGAGGCCTGCATAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
CDS CCA 90 bp TGTAGGTCAGACACGACTGCTCCTTGGACTGGGGAAGACTTTCCTTaGTTGTCAGTCCATAGTGGGCAGGCGGTCGGCTGCACAGCGGAA +
Preference number: 5 (lower is better)
Translates to: CRSDTTAPWTGEDFP*LSVHSGQAVGCTAE
Trigger: TTCCGCTGTGCAGCCGACCGCCTGCCCACTATGGACTGACAACCAAGGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCTGACCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp GCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTGATAGGGGAGGGCACTaGAGGCCCAGGAAGGTCAAG +
Preference number: 5 (lower is better)
Translates to: AVPLAIGQVCNPPQGGNSDRGGH*RPRKVK
Trigger: CTTGACCTTCCTGGGCCTCAAGTGCCCTCCCCTATC...AGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS CCA 90 bp CATCCTCACCAGTGTTGGTCACCGGAAACTCGCCCTGCCAAATGTTaGCATAATGCTGGCCTTTGGGCTGCAGTTTGTTGCCCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: HPHQCWSPETRPAKC*HNAGLWAAVCCPRG
Trigger: TCCCCTGGGGCAACAAACTGCAGCCCAAAGGCCAGCATTATGCCAACATTTGGCAGGGCGAGTTTCCGGTGACCAACACTGGTGAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
CDS-3UTR CAA 90 bp AACCCACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAGCGGGCGCAGCCATGTaGTCCCGCGGGCCATGTGAC +
Preference number: 5 (lower is better)
Translates to: NPPQGGNSLHGIVQSSEKAGAAM*SRGPCD
Trigger: GTCACATGGCCCGCGGGACAACATGGCTGCGCCCGC...TTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000458465.6
CDS-3UTR CAA 90 bp CGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTTGATAGGGGAGGGCACTaGAGGCCCAGGAAGGTCAAG +
Preference number: 5 (lower is better)
Translates to: RFLWPLGRYVTHLRVGILDRGGH*RPRKVK
Trigger: CTTGACCTTCCTGGGCCTCAAGTGCCCTCCCCTATC...AAGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS CCA 90 bp AGGCATCAACAGGCGCAGTTCCTTGGAAGCCATCCTCACCAGTGTTaGTCACCGGAAACTCGCCCTGCCAAATGTTGGCATAATGCTGGC +
Preference number: 5 (lower is better)
Translates to: RHQQAQFLGSHPHQC*SPETRPAKCWHNAG
Trigger: GCCAGCATTATGCCAACATTTGGCAGGGCGAGTTTCCGGTGACCAACACTGGTGAGGATGGCTTCCAAGGAACTGCGCCTGTTGATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
CDS CCA 90 bp GGGACAGGAGGATCCTTCTGGGAGGTCAGTCCACACAGTGGAGTCTaGGTCCATCTTGCCTCATGGAGTAGCTACAGGCAATGTTGGTGT +
Preference number: 5 (lower is better)
Translates to: GTGGSFWEVSPHSGV*VHLASWSSYRQCWC
Trigger: ACACCAACATTGCCTGTAGCTACTCCATGAGGCAAGATGGACCCAGACTCCACTGTGTGGACTGACCTCCCAGAAGGATCCTCCTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp GAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTGGGGAAGACTTTCGGATGGGGACCATCTTaGAGTGCGCGAGTTGCCGCT +
Preference number: 5 (lower is better)
Translates to: EKPNVGQTRLLLGLGKTFGWGPS*SARVAA
Trigger: AGCGGCAACTCGCGCACTCAAAGATGGTCCCCATCC...GAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp GCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTACCCAGGTCAGCAATTaGGTCTCACAAGGCGGTTCC +
Preference number: 5 (lower is better)
Translates to: AVPLAIGQVCNPPQGGNSTQVSN*VSQGGS
Trigger: GGAACCGCCTTGTGAGACCAAATTGCTGACCTGGGT...AGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp GTATCACAATCAGCACTGGGGCCTGTAGCTGAAGGCAGAGTGGCCTTCAGGGACCTGGGAAGAGAAGGGTaGGATTTTGAAGGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: VSQSALGPVAEGRVAFRDLGREG*DFEGSH
Trigger: GTGGCTGCCTTCAAAATCCAACCCTTCTCTTCCCAG...GTCCCTGAAGGCCACTCTGCCTTCAGCTACAGGCCCCAGTGCTGATTGTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS GCA 90 bp GAAGACTTTCCTTGGTTGTCAGTCCATAGTGGGCAGGCGGTCGGCTaGACAGCGGAATCCCAGATTCGAAGCAGAGCTATCAGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: EDFPWLSVHSGQAVG*TAESQIRSRAIRCV
Trigger: AACACACCTGATAGCTCTGCTTCGAATCTGGGATTCCGCTGTGCAGCCGACCGCCTGCCCACTATGGACTGACAACCAAGGAAAGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000458465.6
CDS-3UTR CAA 90 bp TTTGGTCTCACAAGGCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGACACGACTGCTCCTaGGACTGGGGAAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: FGLTRRFLWPLGRYVTHLRHDCS*DWGRLS
Trigger: GGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCT...GAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTGAGACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS GCA 90 bp GACTCTGGAACGTCTGGAGGGCATTTAGTCGTTTGTCCCATAGTCTaGTGGCAGTTCTGTTTTCTTCTCAGGCACTCAGCCCGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: DSGTSGGHLVVCPIV*WQFCFLLRHSAREP
Trigger: AGGCTCACGGGCTGAGTGCCTGAGAAGAAAACAGAACTGCCAGCAGACTATGGGACAAACGACTAAATGCCCTCCAGACGTTCCAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS GCA 90 bp CTGTCTGGGAGGCTGCGTGGCTTCAGAGAGCACGCTCTTAGCCCCTaGACGACACAAAGGGTTTCTACATTACTACAACCAGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: LSGRLRGFREHALSP*TTQRVSTLLQPEEM
Trigger: CATTTCCTCTGGTTGTAGTAATGTAGAAACCCTTTGTGTCGTGCAGGGGCTAAGAGCGTGCTCTCTGAAGCCACGCAGCCTCCCAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS-3UTR CAA 90 bp GAAGTCACAATAGAATCTGATACCCTTTTTAGAACTGGTGAGTTGGAGAGACACGCGGGCGCAGCCATGTaGTCCCGCGGGCCATGTGAC +
Preference number: 5 (lower is better)
Translates to: EVTIESDTLFRTGELERHAGAAM*SRGPCD
Trigger: GTCACATGGCCCGCGGGACAACATGGCTGCGCCCGC...GTGTCTCTCCAACTCACCAGTTCTAAAAAGGGTATCAGATTCTATTGTGACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CAA 90 bp CATAAAGCACATGCACTGACCCAGGTCAGCAATTTGGTCTCACAAGGCGGTTCCAACAGGCGCAGTTCCTaGGAAGCCATCCTCACCAGT +
Preference number: 5 (lower is better)
Translates to: HKAHALTQVSNLVSQGGSNRRSS*EAILTS
Trigger: ACTGGTGAGGATGGCTTCCAAGGAACTGCGCCTGTT...GGAACCGCCTTGTGAGACCAAATTGCTGACCTGGGTCAGTGCATGTGCTTTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR CAA 90 bp GAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTGGGGAAGACTTTCACCCAGGTCAGCAATTaGGTCTCACAAGGCGGTTCC +
Preference number: 5 (lower is better)
Translates to: EKPNVGQTRLLLGLGKTFTQVSN*VSQGGS
Trigger: GGAACCGCCTTGTGAGACCAAATTGCTGACCTGGGT...GAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp CAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGCCATCCTCACCAGTGTaGGTCACCGGAAACTCGCCC +
Preference number: 5 (lower is better)
Translates to: QGGNSLHGIVQSSEKSPMPSSPV*VTGNSP
Trigger: GGGCGAGTTTCCGGTGACCAACACTGGTGAGGATGG...CATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR CAA 90 bp CGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTTGAAGACTTTCCTTGGTaGTCAGTCCATAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: RFLWPLGRYVTHLRVGILEDFPW*SVHSGQ
Trigger: CTGCCCACTATGGACTGACAACCAAGGAAAGTCTTC...AAGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp GCGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTCAGGGTGGGAATTCTTaGCATGGGATCGTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: AVPLAIGQVCNPPQGGNSQGGNS*HGIVQS
Trigger: ACTTTGAACGATCCCATGCAAAGAATTCCCACCCTG...AGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp CACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCGTTCGCTGAAGGCTTaGGGGAGAGGGGGAAACAGA +
Preference number: 5 (lower is better)
Translates to: HLRVGILCMGSFKVLRKARSLKA*GRGGNR
Trigger: TCTGTTTCCCCCTCTCCCCAAAGCCTTCAGCGAACG...GGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CAA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCAGCACGTGCATCTCTTaGGCCAGGACACAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSSTCIS*ARTQSR
Trigger: CCTGCTCTGTGTCCTGGCCAAAGAGATGCACGTGCT...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp GTATCACAATCAGCACTGGGGCCTGTAGCTGAAGGCAGAGTGGCCTTCAGGGACAATATTGGTCTTCACTaGCTCACTCAACATGCCTTC +
Preference number: 5 (lower is better)
Translates to: VSQSALGPVAEGRVAFRDNIGLH*LTQHAF
Trigger: GAAGGCATGTTGAGTGAGCAAGTGAAGACCAATATT...GTCCCTGAAGGCCACTCTGCCTTCAGCTACAGGCCCCAGTGCTGATTGTGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp AGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGTCCATCCTCACCAGTGTaGGTCACCGGAAACTCGCCC +
Preference number: 5 (lower is better)
Translates to: RVGILCMGSFKVLRKAQCPSSPV*VTGNSP
Trigger: GGGCGAGTTTCCGGTGACCAACACTGGTGAGGATGG...ACATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272902.10
ENST00000383843.9
CDS-3UTR CAA 90 bp CCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCACACAAGGCGGTTCCTTaGGCCATTGGGCAGGTATGT +
Preference number: 5 (lower is better)
Translates to: PQGGNSLHGIVQSSEKSPHKAVP*AIGQVC
Trigger: ACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTG...TGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS TCA 90 bp TCAATAGTAACTCTCCTCGCAGGTGCTTCCCCATCCTGCTTTATCTaGGGATCATCTGTGCCCATTGTAAATACTCCAGCAGGGATGGGG +
Preference number: 5 (lower is better)
Translates to: SIVTLLAGASPSCFI*GSSVPIVNTPAGMG
Trigger: CCCCATCCCTGCTGGAGTATTTACAATGGGCACAGATGATCCTCAGATAAAGCAGGATGGGGAAGCACCTGCGAGGAGAGTTACTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
ENST00000458465.6
CDS CCA 90 bp AAAGTTCTGAGAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTaGACTGGGGAAGACTTTCCTTGGTTGTCAGTCCATAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: KVLRKAQCRSDTTAP*TGEDFPWLSVHSGQ
Trigger: CTGCCCACTATGGACTGACAACCAAGGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTCTCAGAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp TTCCTTGGAAAAACAAAGTGCAGTACGAATATAAAGGAGTCACCACACCCCTCTGGATGGGGACCATCTTaGAGTGCGCGAGTTGCCGCT +
Preference number: 5 (lower is better)
Translates to: FLGKTKCSTNIKESPHPSGWGPS*SARVAA
Trigger: AGCGGCAACTCGCGCACTCAAAGATGGTCCCCATCC...AGAGGGGTGTGGTGACTCCTTTATATTCGTACTGCACTTTGTTTTTCCAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CAA 90 bp TTCAAAGTTCTGAGAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTAGACACGACTGCTCCTaGGACTGGGGAAGACTTTCC +
Preference number: 5 (lower is better)
Translates to: FKVLRKAQCRSDTTAPWTRHDCS*DWGRLS
Trigger: GGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCT...AGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTCTCAGAACTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp TTCAAAGTTCTGAGAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTGGACTCGGTTCCTTTGGCCATaGGGCAGGTATGTAACCCAC +
Preference number: 5 (lower is better)
Translates to: FKVLRKAQCRSDTTAPWTRFLWP*GRYVTH
Trigger: GTGGGTTACATACCTGCCCAATGGCCAAAGGAACCG...AGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTCTCAGAACTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp AACCCACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAACCCAGGTCAGCAATTaGGTCTCACAAGGCGGTTCC +
Preference number: 5 (lower is better)
Translates to: NPPQGGNSLHGIVQSSEKTQVSN*VSQGGS
Trigger: GGAACCGCCTTGTGAGACCAAATTGCTGACCTGGGT...TTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp GTATCACAATCAGCACTGGGGCCTGTAGCTGAAGGCAGAGTGGCCTTCAGGGACCTCAGATGCCACATCTaGAAAATAGGGATCATAGTA +
Preference number: 5 (lower is better)
Translates to: VSQSALGPVAEGRVAFRDLRCHI*KIGIIV
Trigger: TACTATGATCCCTATTTTCAAGATGTGGCATCTGAG...GTCCCTGAAGGCCACTCTGCCTTCAGCTACAGGCCCCAGTGCTGATTGTGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCCCACCGTGCCCAGCCTaGTCTACCTTTAATGGCAAA +
Preference number: 5 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSPPCPA*STFNGK
Trigger: TTTGCCATTAAAGGTAGACAAGGCTGGGCACGGTGG...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp TTCCTATGTGTTCAACGGCTGAACTTCAGCATACCATCACCGGCCCCATGTGGGAATATTGGTCTTCACTaGCTCACTCAACATGCCTTC +
Preference number: 5 (lower is better)
Translates to: FLCVQRLNFSIPSPAPCGNIGLH*LTQHAF
Trigger: GAAGGCATGTTGAGTGAGCAAGTGAAGACCAATATT...CCCACATGGGGCCGGTGATGGTATGCTGAAGTTCAGCCGTTGAACACATAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CAA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAAACAGGCGCAGTTCCTaGGAAGCCATCCTCACCAGT +
Preference number: 5 (lower is better)
Translates to: LFCGGDDALDISSKHQQRNRRSS*EAILTS
Trigger: ACTGGTGAGGATGGCTTCCAAGGAACTGCGCCTGTT...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp CCTTGGAAAAACAAAGTGCAGTACGAATATAAAGGAGTCACCACACCCCTCTTCCACAAGGCGGTTCCTTaGGCCATTGGGCAGGTATGT +
Preference number: 5 (lower is better)
Translates to: PWKNKVQYEYKGVTTPLFHKAVP*AIGQVC
Trigger: ACATACCTGCCCAATGGCCAAAGGAACCGCCTTGTG...GAAGAGGGGTGTGGTGACTCCTTTATATTCGTACTGCACTTTGTTTTTCCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS TCA 90 bp AAGGATAATCACGAGGTAAAGTCTCACGATAGGCCGTCTTCAAGTTaGAGAGCAAGGAAGCCAGTGGTGGATCAGTCTGAGTCCCAAAAC +
Preference number: 5 (lower is better)
Translates to: KDNHEVKSHDRPSSS*RARKPVVDQSESQN
Trigger: GTTTTGGGACTCAGACTGATCCACCACTGGCTTCCTTGCTCTTCAACTTGAAGACGGCCTATCGTGAGACTTTACCTCGTGATTATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS TCA 90 bp AAGCAAGCTAAGACCTTCCCTCACATGGCGGCAGGAGAGAGAGTATaGGGATTGAAGCGGGAAGAGCCCCTTATAAAATCATCAGATCTA +
Preference number: 5 (lower is better)
Translates to: KQAKTFPHMAAGERV*GLKREEPLIKSSDL
Trigger: TAGATCTGATGATTTTATAAGGGGCTCTTCCCGCTTCAATCCTCATACTCTCTCTCCTGCCGCCATGTGAGGGAAGGTCTTAGCTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS-3UTR CAA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATGGATGGGGACCATCTTaGAGTGCGCGAGTTGCCGCT +
Preference number: 5 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHGWGPS*SARVAA
Trigger: AGCGGCAACTCGCGCACTCAAAGATGGTCCCCATCC...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp TTAGCGCACATTTCACGTTCGCTGAAGGCTTTGGGGAGAGGGGGAAACAGAGCTCTGTCAAATAGCCAGTaGAGTTCACAAACTTCTCAA +
Preference number: 5 (lower is better)
Translates to: LAHISRSLKALGRGGNRALSNSQ*SSQTSQ
Trigger: TTGAGAAGTTTGTGAACTCAACTGGCTATTTGACAG...AGCTCTGTTTCCCCCTCTCCCCAAAGCCTTCAGCGAACGTGAAATGTGCGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CAA 90 bp CGGTTCCTTTGGCCATTGGGCAGGTATGTAACCCACCTCAGGGTGGGAATTCTTCTGTCAAATAGCCAGTaGAGTTCACAAACTTCTCAA +
Preference number: 5 (lower is better)
Translates to: RFLWPLGRYVTHLRVGILLSNSQ*SSQTSQ
Trigger: TTGAGAAGTTTGTGAACTCAACTGGCTATTTGACAG...AAGAATTCCCACCCTGAGGTGGGTTACATACCTGCCCAATGGCCAAAGGAACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp GGAAACAGAGCTTATGACTGCCCCTCTGAACCAAAGGCACTTAATGTTAAAAGAAACAGGCGCAGTTCCTaGGAAGCCATCCTCACCAGT +
Preference number: 5 (lower is better)
Translates to: GNRAYDCPSEPKALNVKRNRRSS*EAILTS
Trigger: ACTGGTGAGGATGGCTTCCAAGGAACTGCGCCTGTT...TCTTTTAACATTAAGTGCCTTTGGTTCAGAGGGGCAGTCATAAGCTCTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CAA 90 bp GTATGTAACCCACCTCAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAAGACTTTCCTTGGTaGTCAGTCCATAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: VCNPPQGGNSLHGIVQSSEDFPW*SVHSGQ
Trigger: CTGCCCACTATGGACTGACAACCAAGGAAAGTCTTC...AGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTGAGGTGGGTTACATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAGAGTCTGGGTCCATCTaGCCTCATGGAGTAGCTACA +
Preference number: 5 (lower is better)
Translates to: LFCGGDDALDISSKHQQRESGSI*PHGVAT
Trigger: TGTAGCTACTCCATGAGGCAAGATGGACCCAGACTC...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGATGGGGAGTTTGCAAGTaGAGCCTTCCTGAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: LFCGGDDALDISSKHQQRWGVCK*SLPESF
Trigger: GAAGGACTCAGGAAGGCTCAACTTGCAAACTCCCCA...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS GCA 90 bp ATAGGCATCCATGTAAAAGGCATCAATAGTAACTCTCCTCGCAGGTaGTTCCCCATCCTGCTTTATCTGAGGATCATCTGTGCCCATTGT +
Preference number: 5 (lower is better)
Translates to: IGIHVKGINSNSPRR*FPILLYLRIICAHC
Trigger: ACAATGGGCACAGATGATCCTCAGATAAAGCAGGATGGGGAAGCACCTGCGAGGAGAGTTACTATTGATGCCTTTTACATGGATGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
ENST00000458465.6
CDS GCA 90 bp CTGCAACTGCCTGTTGAATATTGGTCTTCACTTGCTCACTCAACATaGCTTCAAAGACAAAGGAGTCGCCAAACTTCTCAGCCTCTGTCA +
Preference number: 5 (lower is better)
Translates to: LQLPVEYWSSLAHST*LQRQRSRQTSQPLS
Trigger: TGACAGAGGCTGAGAAGTTTGGCGACTCCTTTGTCTTTGAAGGCATGTTGAGTGAGCAAGTGAAGACCAATATTCAACAGGCAGTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000405420.2
ENST00000448413.5
CDS CCA 90 bp GTATTGAGCAGCATGGTTCTAGAGATGAGAAGGCCTTCCACCTGCTaGCTGTGTGTCTTCTCAACATCTCAGATGCCACATCTTGAAAAT +
Preference number: 5 (lower is better)
Translates to: VLSSMVLEMRRPSTC*LCVFSTSQMPHLEN
Trigger: ATTTTCAAGATGTGGCATCTGAGATGTTGAGAAGACACACAGCCAGCAGGTGGAAGGCCTTCTCATCTCTAGAACCATGCTGCTCAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp GTCACCCCACAGACATTCCTATGTGTTCAACGGCTGAACTTCAGCATACCATCAAGCTGCAACTGCCTGTaGAATATTGGTCTTCACTTG +
Preference number: 5 (lower is better)
Translates to: VTPQTFLCVQRLNFSIPSSCNCL*NIGLHL
Trigger: CAAGTGAAGACCAATATTCAACAGGCAGTTGCAGCT...TGATGGTATGCTGAAGTTCAGCCGTTGAACACATAGGAATGTCTGTGGGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CAA 90 bp AGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGTGAAGACTTTCCTTGGTaGTCAGTCCATAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: RVGILCMGSFKVLRKAQCEDFPW*SVHSGQ
Trigger: CTGCCCACTATGGACTGACAACCAAGGAAAGTCTTC...ACATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp CAGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGCAGGGTGGGAATTCTTaGCATGGGATCGTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: QGGNSLHGIVQSSEKSPMQGGNS*HGIVQS
Trigger: ACTTTGAACGATCCCATGCAAAGAATTCCCACCCTG...CATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp AGGGTGGGAATTCTTTGCATGGGATCGTTCAAAGTTCTGAGAAAAGCCCAATGTTTTAGAACTGGTGAGTaGGAGAGACACCCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: RVGILCMGSFKVLRKAQCFRTGE*ERHPEV
Trigger: GACCTCTGGGTGTCTCTCCAACTCACCAGTTCTAAA...ACATTGGGCTTTTCTCAGAACTTTGAACGATCCCATGCAAAGAATTCCCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272902.10
CDS-3UTR CAA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAGCTGATGCCTACGTATaGAGCAGCATGGTTCTAGAG +
Preference number: 5 (lower is better)
Translates to: LFCGGDDALDISSKHQQRADAYV*SSMVLE
Trigger: CTCTAGAACCATGCTGCTCAATACGTAGGCATCAGC...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp CTCTTTTGTGGTGGAGATGATGCTCTGGACATAAGTTCAAAGCATCAGCAGAGAAGGGCATTTAGTCGTTaGTCCCATAGTCTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LFCGGDDALDISSKHQQRRAFSR*SHSLLA
Trigger: TGCCAGCAGACTATGGGACAAACGACTAAATGCCCT...TCTCTGCTGATGCTTTGAACTTATGTCCAGAGCATCATCTCCACCACAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS GCA 90 bp TTTCCGTACTTCCACCAGAGCCCAACTTCTATCAGACAAACTCCATaGTATCTGCATGCTAACTCCATGGATAATCTGCATGAAAAGGGG +
Preference number: 5 (lower is better)
Translates to: FPYFHQSPTSIRQTP*YLHANSMDNLHEKG
Trigger: CCCCTTTTCATGCAGATTATCCATGGAGTTAGCATGCAGATAGCATGGAGTTTGTCTGATAGAAGTTGGGCTCTGGTGGAAGTACGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484993.1
CDS-3UTR CAA 90 bp GTGATGATCTCCAAAGATGCACCACACCATAAAGCACATGCACTGACCCAGGTCCTGTCAAATAGCCAGTaGAGTTCACAAACTTCTCAA +
Preference number: 5 (lower is better)
Translates to: VMISKDAPHHKAHALTQVLSNSQ*SSQTSQ
Trigger: TTGAGAAGTTTGTGAACTCAACTGGCTATTTGACAG...GACCTGGGTCAGTGCATGTGCTTTATGGTGTGGTGCATCTTTGGAGATCATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS-3UTR CAA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTCCATCCTCACCAGTGTaGGTCACCGGAAACTCGCCC +
Preference number: 5 (lower is better)
Translates to: ESLLLISPGNLYCISQGSPSSPV*VTGNSP
Trigger: GGGCGAGTTTCCGGTGACCAACACTGGTGAGGATGG...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATGGGGAGAAGAAGACTTaGCTGTGCACCCAAGGTCAC +
Preference number: 5 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHGEKKT*LCTQGH
Trigger: GTGACCTTGGGTGCACAGCAAAGTCTTCTTCTCCCC...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS TCA 90 bp TATAAAATCATCAGATCTAGCGAGAACTCACTCACTACCACGAGATaGGAACAGCGTGTAGGAAACTGCCCCCATAATCCAATCACTTCC +
Preference number: 5 (lower is better)
Translates to: YKIIRSSENSLTTTR*EQRVGNCPHNPITS
Trigger: GGAAGTGATTGGATTATGGGGGCAGTTTCCTACACGCTGTTCTCATCTCGTGGTAGTGAGTGAGTTCTCGCTAGATCTGATGATTTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS-3UTR CAA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCCAGGCAATGTTGGTGTaGAGGCAATCTATTTTTCTT +
Preference number: 5 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSQAMLV*RQSIFL
Trigger: AAGAAAAATAGATTGCCTCAACACCAACATTGCCTG...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCATGGGTGTCACTCATTaGTCTTTATCTGTCTGTTAC +
Preference number: 5 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSMGVTH*SLSVCY
Trigger: GTAACAGACAGATAAAGACAAATGAGTGACACCCAT...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS CCA 90 bp AGCAAAAGTCCTAGGATAGTTTTCTCTTTGGGTGGGTACTTTGGATaGGAAAGGAATTTCATCTCACGGGACAGAGGAGCATTTGCAAAA +
Preference number: 5 (lower is better)
Translates to: SKSPRIVFSLGGYFG*ERNFISRDRGAFAK
Trigger: TTTTGCAAATGCTCCTCTGTCCCGTGAGATGAAATTCCTTTCCCATCCAAAGTACCCACCCAAAGAGAAAACTATCCTAGGACTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS-3UTR CAA 90 bp GAATCCACCCTGGGGAACCTTCAGATAAATCGCTTTAGTCACTCTCAAGTCAGCCTTTATGCTATACTCTaGTTTCAGACATCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: ESTLGNLQINRFSHSQVSLYAIL*FQTSES
Trigger: GCTTTCAGATGTCTGAAACAAGAGTATAGCATAAAG...GCTGACTTGAGAGTGACTAAAGCGATTTATCTGAAGGTTCCCCAGGGTGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS TCA 90 bp AAACCTAATAGAGACTCCCTAAGAAACCTGCATTCTATCTTTCCCTaGCCATTCAATTTCCGTACTTCCACCAGAGCCCAACTTCTATCA +
Preference number: 5 (lower is better)
Translates to: KPNRDSLRNLHSIFP*PFNFRTSTRAQLLS
Trigger: TGATAGAAGTTGGGCTCTGGTGGAAGTACGGAAATTGAATGGTCAGGGAAAGATAGAATGCAGGTTTCTTAGGGAGTCTCTATTAGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484993.1
CDS-3UTR CAA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATGGCCCATTGCTTATCTaGTTAATGAGGCTAGTCCAC +
Preference number: 5 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHGPLLI*LMRLVH
Trigger: GTGGACTAGCCTCATTAACAAGATAAGCAATGGGCC...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp TGTCTCTCCAGAAGCCGCATTCTTAACTTTATGCTATACTCTTGTTTCAGACATAGCTGCAACTGCCTGTaGAATATTGGTCTTCACTTG +
Preference number: 5 (lower is better)
Translates to: CLSRSRILNFMLYSCFRHSCNCL*NIGLHL
Trigger: CAAGTGAAGACCAATATTCAACAGGCAGTTGCAGCT...ATGTCTGAAACAAGAGTATAGCATAAAGTTAAGAATGCGGCTTCTGGAGAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTGGGATCATAGTACTCTaGGGACCTATGGCACATGTA +
Preference number: 5 (lower is better)
Translates to: ESLLLISPGNLYCISQGSGIIVL*GPMAHV
Trigger: TACATGTGCCATAGGTCCCAAGAGTACTATGATCCC...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTTTTGAAGGCAGCCACTaGATACTGGGGAGTTTGCAA +
Preference number: 5 (lower is better)
Translates to: ESLLLISPGNLYCISQGSFEGSH*ILGSLQ
Trigger: TTGCAAACTCCCCAGTATCAAGTGGCTGCCTTCAAA...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS-3UTR CAA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTGTCACAGAGCTGAATTaGAAACCAAGTCTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: ESLLLISPGNLYCISQGSVTELN*KPSLSL
Trigger: GAGAGACAGACTTGGTTTCAAATTCAGCTCTGTGAC...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS CCA 90 bp TTGGTTTATATCATGTTAATCTCTTTTGATAAATTCAGACCAGTCTaGATCCAAATAATACAGAACATGTCCAGAGTGTCCCTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: LVYIMLISFDKFRPV*IQIIQNMSRVSLGF
Trigger: AAACCCCAGGGACACTCTGGACATGTTCTGTATTATTTGGATCCAGACTGGTCTGAATTTATCAAAAGAGATTAACATGATATAAACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS-3UTR CAA 90 bp GAGTCATTATTATTAATAAGTCCAGGCAATCTCTACTGTATTAGTCAGGGTTCTCTGTCAAATAGCCAGTaGAGTTCACAAACTTCTCAA +
Preference number: 5 (lower is better)
Translates to: ESLLLISPGNLYCISQGSLSNSQ*SSQTSQ
Trigger: TTGAGAAGTTTGTGAACTCAACTGGCTATTTGACAG...AGAACCCTGACTAATACAGTAGAGATTGCCTGGACTTATTAATAATAATGACTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS GCA 72 bp CTGCCGAACTGCCATGGGCGCCAGGCCGCTGGGGCGTaGCGCAGCCGCAAGAACCCGCAAGGGACCCCGCGC +
Preference number: 6 (lower is better)
Translates to: LPNCHGRQAAGA*RSRKNPQGTPR
Trigger: GCGCGGGGTCCCTTGCGGGTTCTTGCGGCTGCGGCACGCCCCAGCGGCCTGGCGCCCATGGCAGTTCGGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
ENST00000458465.6
CDS TCA 72 bp ACGGGGCCCGGAGCGTTAGCCTCCCGCGAGTATCGGTaGGCGGCTGCCGAACTGCCATGGGCGCCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: TGPGALASREYR*AAAELPWAPGR
Trigger: GCGGCCTGGCGCCCATGGCAGTTCGGCAGCCGCTCACCGATACTCGCGGGAGGCTAACGCTCCGGGCCCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
ENST00000458465.6
CDS GCA 72 bp CGGAGCGTTAGCCTCCCGCGAGTATCGGTGAGCGGCTaGCGAACTGCCATGGGCGCCAGGCCGCTGGGGCGT +
Preference number: 6 (lower is better)
Translates to: RSVSLPRVSVSG*RTAMGARPLGR
Trigger: ACGCCCCAGCGGCCTGGCGCCCATGGCAGTTCGGCAGCCGCTCACCGATACTCGCGGGAGGCTAACGCTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
ENST00000458465.6
CDS GCA 72 bp CCAGCAGGGATGGGGACCATCTTTGAGTGCGCGAGTTaGCGCTCTCCGGGTACGGGGCCCGGAGCGTTAGCC +
Preference number: 6 (lower is better)
Translates to: PAGMGTIFECAS*RSPGTGPGALA
Trigger: GGCTAACGCTCCGGGCCCCGTACCCGGAGAGCGGCAACTCGCGCACTCAAAGATGGTCCCCATCCCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
ENST00000458465.6
CDS CCA 72 bp GGCCTCCTCGACAGCTGTATTCCCACTCAGCTTCCGTaGGCAGCCGCTTCCCTGCCCAAGTGCAGTAGGCAA +
Preference number: 6 (lower is better)
Translates to: GLLDSCIPTQLP*AAASLPKCSRQ
Trigger: TTGCCTACTGCACTTGGGCAGGGAAGCGGCTGCCCACGGAAGCTGAGTGGGAATACAGCTGTCGAGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
CDS CCA 72 bp GTTTCTTTATCTGTGTCGCCGCCTAGTCTCCGGTCTTaGTGCTCTCCCGGGGGTGCCCCAAGGAGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: VSLSVSPPSLRS*CSPGGAPRSQC
Trigger: GCACTGGCTCCTTGGGGCACCCCCGGGAGAGCACCAAGACCGGAGACTAGGCGGCGACACAGATAAAGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469888.1
CDS CAA 72 bp GCCTTGAGCCCAGAAGGAGTGGCAGCCTCAGGACGTTaGCCAGGTGGCCTGGAATGTGAGGGAAGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: ALSPEGVAASGR*PGGLECEGSLS
Trigger: GCTGAGGCTTCCCTCACATTCCAGGCCACCTGGCAAACGTCCTGAGGCTGCCACTCCTTCTGGGCTCAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS CCA 72 bp GACACGACTGCTCCTTGGACTGGGGAAGACTTTCCTTaGTTGTCAGTCCATAGTGGGCAGGCGGTCGGCTGC +
Preference number: 6 (lower is better)
Translates to: DTTAPWTGEDFP*LSVHSGQAVGC
Trigger: GCAGCCGACCGCCTGCCCACTATGGACTGACAACCAAGGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS CAA 90 bp AGGTCAGACACGACTGCTCCTTGGACTGGGGAAGACTTTCCTTGGTaGTCAGTCCATAGTGGGCAGGCGGTCGGCTGCACAGCGGAATCC +
Preference number: 6 (lower is better)
Translates to: RSDTTAPWTGEDFPW*SVHSGQAVGCTAES
Trigger: GGATTCCGCTGTGCAGCCGACCGCCTGCCCACTATGGACTGACAACCAAGGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS GCA 72 bp CCTTGGTTGTCAGTCCATAGTGGGCAGGCGGTCGGCTaGACAGCGGAATCCCAGATTCGAAGCAGAGCTATC +
Preference number: 6 (lower is better)
Translates to: PWLSVHSGQAVG*TAESQIRSRAI
Trigger: GATAGCTCTGCTTCGAATCTGGGATTCCGCTGTGCAGCCGACCGCCTGCCCACTATGGACTGACAACCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000458465.6
CDS CAA 72 bp ACGACTGCTCCTTGGACTGGGGAAGACTTTCCTTGGTaGTCAGTCCATAGTGGGCAGGCGGTCGGCTGCACA +
Preference number: 6 (lower is better)
Translates to: TTAPWTGEDFPW*SVHSGQAVGCT
Trigger: TGTGCAGCCGACCGCCTGCCCACTATGGACTGACAACCAAGGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS CCA 72 bp CAGGCGCAGTTCCTTGGAAGCCATCCTCACCAGTGTTaGTCACCGGAAACTCGCCCTGCCAAATGTTGGCAT +
Preference number: 6 (lower is better)
Translates to: QAQFLGSHPHQC*SPETRPAKCWH
Trigger: ATGCCAACATTTGGCAGGGCGAGTTTCCGGTGACCAACACTGGTGAGGATGGCTTCCAAGGAACTGCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
CDS CAA 72 bp ACAGGCGCAGTTCCTTGGAAGCCATCCTCACCAGTGTaGGTCACCGGAAACTCGCCCTGCCAAATGTTGGCA +
Preference number: 6 (lower is better)
Translates to: TGAVPWKPSSPV*VTGNSPCQMLA
Trigger: TGCCAACATTTGGCAGGGCGAGTTTCCGGTGACCAACACTGGTGAGGATGGCTTCCAAGGAACTGCGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
CDS CCA 72 bp GGATCCTTCTGGGAGGTCAGTCCACACAGTGGAGTCTaGGTCCATCTTGCCTCATGGAGTAGCTACAGGCAA +
Preference number: 6 (lower is better)
Translates to: GSFWEVSPHSGV*VHLASWSSYRQ
Trigger: TTGCCTGTAGCTACTCCATGAGGCAAGATGGACCCAGACTCCACTGTGTGGACTGACCTCCCAGAAGGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS CAA 72 bp ACCATTGGGAGGGAAGGCATCAACAGGCGCAGTTCCTaGGAAGCCATCCTCACCAGTGTTGGTCACCGGAAA +
Preference number: 6 (lower is better)
Translates to: TIGREGINRRSS*EAILTSVGHRK
Trigger: TTTCCGGTGACCAACACTGGTGAGGATGGCTTCCAAGGAACTGCGCCTGTTGATGCCTTCCCTCCCAATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
CDS CCA 72 bp CAGTGTTGGTCACCGGAAACTCGCCCTGCCAAATGTTaGCATAATGCTGGCCTTTGGGCTGCAGTTTGTTGC +
Preference number: 6 (lower is better)
Translates to: QCWSPETRPAKC*HNAGLWAAVCC
Trigger: GCAACAAACTGCAGCCCAAAGGCCAGCATTATGCCAACATTTGGCAGGGCGAGTTTCCGGTGACCAACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
CDS CAA 72 bp GGGAGGTCAGTCCACACAGTGGAGTCTGGGTCCATCTaGCCTCATGGAGTAGCTACAGGCAATGTTGGTGTT +
Preference number: 6 (lower is better)
Translates to: GRSVHTVESGSI*PHGVATGNVGV
Trigger: AACACCAACATTGCCTGTAGCTACTCCATGAGGCAAGATGGACCCAGACTCCACTGTGTGGACTGACCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS CAA 90 bp GATCCTTCTGGGAGGTCAGTCCACACAGTGGAGTCTGGGTCCATCTaGCCTCATGGAGTAGCTACAGGCAATGTTGGTGTTGAGGCAATC +
Preference number: 6 (lower is better)
Translates to: DPSGRSVHTVESGSI*PHGVATGNVGVEAI
Trigger: GATTGCCTCAACACCAACATTGCCTGTAGCTACTCCATGAGGCAAGATGGACCCAGACTCCACTGTGTGGACTGACCTCCCAGAAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS GCA 72 bp TGTTGGCATAATGCTGGCCTTTGGGCTGCAGTTTGTTaGCCCAGGGGAAAAGTCTATTATGCAGGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: CWHNAGLWAAVC*PRGKVYYAGLL
Trigger: GAGGAGGCCTGCATAATAGACTTTTCCCCTGGGGCAACAAACTGCAGCCCAAAGGCCAGCATTATGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
CDS GCA 72 bp AGGCTGCGTGGCTTCAGAGAGCACGCTCTTAGCCCCTaGACGACACAAAGGGTTTCTACATTACTACAACCA +
Preference number: 6 (lower is better)
Translates to: RLRGFREHALSP*TTQRVSTLLQP
Trigger: TGGTTGTAGTAATGTAGAAACCCTTTGTGTCGTGCAGGGGCTAAGAGCGTGCTCTCTGAAGCCACGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS CCA 72 bp GTAGGCAACCGCATCATTCCAGGACACATGGAGAACTaGATGATCCGGCCTGTGCAGAATAGTAGAGTCAGG +
Preference number: 6 (lower is better)
Translates to: VGNRIIPGHMEN*MIRPVQNSRVR
Trigger: CCTGACTCTACTATTCTGCACAGGCCGGATCATCCAGTTCTCCATGTGTCCTGGAATGATGCGGTTGCCTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
CDS CAA 90 bp CTGAGAGGCAGAGGACTCTGGAACGTCTGGAGGGCATTTAGTCGTTaGTCCCATAGTCTGCTGGCAGTTCTGTTTTCTTCTCAGGCACTC +
Preference number: 6 (lower is better)
Translates to: LRGRGLWNVWRAFSR*SHSLLAVLFSSQAL
Trigger: GAGTGCCTGAGAAGAAAACAGAACTGCCAGCAGACTATGGGACAAACGACTAAATGCCCTCCAGACGTTCCAGAGTCCTCTGCCTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS CAA 90 bp CTGAGAGGCAGAGGACTCTGGAACGTCTGGAGGGCATTTAGTCGTTaGTCCCATAGTCTGCTGGCAGTTCTGTTTTCTTCTCAGGCACTA +
Preference number: 6 (lower is better)
Translates to: LRGRGLWNVWRAFSR*SHSLLAVLFSSQAL
Trigger: TAGTGCCTGAGAAGAAAACAGAACTGCCAGCAGACTATGGGACAAACGACTAAATGCCCTCCAGACGTTCCAGAGTCCTCTGCCTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469888.1
CDS GCA 72 bp ACGTCTGGAGGGCATTTAGTCGTTTGTCCCATAGTCTaGTGGCAGTTCTGTTTTCTTCTCAGGCACTCAGCC +
Preference number: 6 (lower is better)
Translates to: TSGGHLVVCPIV*WQFCFLLRHSA
Trigger: GGCTGAGTGCCTGAGAAGAAAACAGAACTGCCAGCAGACTATGGGACAAACGACTAAATGCCCTCCAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS GCA 72 bp AGTGTCCCTGGGGTTTTCTTTCACCTCTTCCAGTTCTaGCATCAGGTGCTCAGATCGCCGTTTGCTTGGTTT +
Preference number: 6 (lower is better)
Translates to: SVPGVFFHLFQF*HQVLRSPFAWF
Trigger: AAACCAAGCAAACGGCGATCTGAGCACCTGATGGCAGAACTGGAAGAGGTGAAAGAAAACCCCAGGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS CCA 72 bp TCTGGAGGGCATTTAGTCGTTTGTCCCATAGTCTGCTaGCAGTTCTGTTTTCTTCTCAGGCACTCAGCCCGT +
Preference number: 6 (lower is better)
Translates to: SGGHLVVCPIVC*QFCFLLRHSAR
Trigger: ACGGGCTGAGTGCCTGAGAAGAAAACAGAACTGCCAGCAGACTATGGGACAAACGACTAAATGCCCTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS TCA 72 bp ACTCTCCTCGCAGGTGCTTCCCCATCCTGCTTTATCTaGGGATCATCTGTGCCCATTGTAAATACTCCAGCA +
Preference number: 6 (lower is better)
Translates to: TLLAGASPSCFI*GSSVPIVNTPA
Trigger: TGCTGGAGTATTTACAATGGGCACAGATGATCCTCAGATAAAGCAGGATGGGGAAGCACCTGCGAGGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
ENST00000458465.6
CDS TCA 72 bp AAGACCTTCCCTCACATGGCGGCAGGAGAGAGAGTATaGGGATTGAAGCGGGAAGAGCCCCTTATAAAATCA +
Preference number: 6 (lower is better)
Translates to: KTFPHMAAGERV*GLKREEPLIKS
Trigger: TGATTTTATAAGGGGCTCTTCCCGCTTCAATCCTCATACTCTCTCTCCTGCCGCCATGTGAGGGAAGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS CCA 72 bp ATGCGTTCCCCACTATGTTGTATAAGCCATAACCATTaGGAGGGAAGGCATCAACAGGCGCAGTTCCTTGGA +
Preference number: 6 (lower is better)
Translates to: MRSPLCCISHNH*EGRHQQAQFLG
Trigger: TCCAAGGAACTGCGCCTGTTGATGCCTTCCCTCCCAATGGTTATGGCTTATACAACATAGTGGGGAACGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
CDS CCA 72 bp AGAAAAGCCCAATGTAGGTCAGACACGACTGCTCCTTaGACTGGGGAAGACTTTCCTTGGTTGTCAGTCCAT +
Preference number: 6 (lower is better)
Translates to: RKAQCRSDTTAP*TGEDFPWLSVH
Trigger: ATGGACTGACAACCAAGGAAAGTCTTCCCCAGTCCAAGGAGCAGTCGTGTCTGACCTACATTGGGCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000458465.6
CDS CCA 72 bp AGCATGGTTCTAGAGATGAGAAGGCCTTCCACCTGCTaGCTGTGTGTCTTCTCAACATCTCAGATGCCACAT +
Preference number: 6 (lower is better)
Translates to: SMVLEMRRPSTC*LCVFSTSQMPH
Trigger: ATGTGGCATCTGAGATGTTGAGAAGACACACAGCCAGCAGGTGGAAGGCCTTCTCATCTCTAGAACCATGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS CAA 90 bp CCACCAGGGAGCAGCTGCAACTGCCTGTTGAATATTGGTCTTCACTaGCTCACTCAACATGCCTTCAAAGACAAAGGAGTCGCCAAACTT +
Preference number: 6 (lower is better)
Translates to: PPGSSCNCLLNIGLH*LTQHAFKDKGVAKL
Trigger: AAGTTTGGCGACTCCTTTGTCTTTGAAGGCATGTTGAGTGAGCAAGTGAAGACCAATATTCAACAGGCAGTTGCAGCTGCTCCCTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000405420.2
ENST00000448413.5
CDS TCA 72 bp ATCAGATCTAGCGAGAACTCACTCACTACCACGAGATaGGAACAGCGTGTAGGAAACTGCCCCCATAATCCA +
Preference number: 6 (lower is better)
Translates to: IRSSENSLTTTR*EQRVGNCPHNP
Trigger: TGGATTATGGGGGCAGTTTCCTACACGCTGTTCTCATCTCGTGGTAGTGAGTGAGTTCTCGCTAGATCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS CAA 90 bp CCACCTGCTGGCTGTGTGTCTTCTCAACATCTCAGATGCCACATCTaGAAAATAGGGATCATAGTACTCTTGGGACCTATGGCACATGTA +
Preference number: 6 (lower is better)
Translates to: PPAGCVSSQHLRCHI*KIGIIVLLGPMAHV
Trigger: TACATGTGCCATAGGTCCCAAGAGTACTATGATCCCTATTTTCAAGATGTGGCATCTGAGATGTTGAGAAGACACACAGCCAGCAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS GCA 72 bp ACGTCTGGAGGGCATTTAGTCGTTTGTCCCATAGTCTaGTGGCAGTTCTGTTTTCTTCTCAGGCACTATTAC +
Preference number: 6 (lower is better)
Translates to: TSGGHLVVCPIV*WQFCFLLRHYY
Trigger: GTAATAGTGCCTGAGAAGAAAACAGAACTGCCAGCAGACTATGGGACAAACGACTAAATGCCCTCCAGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469888.1
CDS CCA 72 bp ATGCGTTCCCCACTATGTTGTATAAGCCATAACCATTaGGAGGGAAGGCATCAACCTCTGTCAAATAGCCAG +
Preference number: 6 (lower is better)
Translates to: MRSPLCCISHNH*EGRHQPLSNSQ
Trigger: CTGGCTATTTGACAGAGGTTGATGCCTTCCCTCCCAATGGTTATGGCTTATACAACATAGTGGGGAACGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458465.6
CDS CCA 72 bp CCTAGGATAGTTTTCTCTTTGGGTGGGTACTTTGGATaGGAAAGGAATTTCATCTCACGGGACAGAGGAGCA +
Preference number: 6 (lower is better)
Translates to: PRIVFSLGGYFG*ERNFISRDRGA
Trigger: TGCTCCTCTGTCCCGTGAGATGAAATTCCTTTCCCATCCAAAGTACCCACCCAAAGAGAAAACTATCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS TCA 72 bp CGTTTCTTCAACAGAATGATGAACAGTCCACCAGTCTaGAGTCCATTCCCATGCGTTCCCCACTATGTTGTA +
Preference number: 6 (lower is better)
Translates to: RFFNRMMNSPPV*SPFPCVPHYVV
Trigger: TACAACATAGTGGGGAACGCATGGGAATGGACTTCAGACTGGTGGACTGTTCATCATTCTGTTGAAGAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272902.10
ENST00000383843.9
ENST00000405420.2
ENST00000448413.5
ENST00000458465.6
CDS TCA 72 bp AGAGACTCCCTAAGAAACCTGCATTCTATCTTTCCCTaGCCATTCAATTTCCGTACTTCCACCAGAGCCCAA +
Preference number: 6 (lower is better)
Translates to: RDSLRNLHSIFP*PFNFRTSTRAQ
Trigger: TTGGGCTCTGGTGGAAGTACGGAAATTGAATGGTCAGGGAAAGATAGAATGCAGGTTTCTTAGGGAGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484993.1
CDS CAA 72 bp AGCAGCTGCAACTGCCTGTTGAATATTGGTCTTCACTaGCTCACTCAACATGCCTTCAAAGACAAAGGAGTC +
Preference number: 6 (lower is better)
Translates to: SSCNCLLNIGLH*LTQHAFKDKGV
Trigger: GACTCCTTTGTCTTTGAAGGCATGTTGAGTGAGCAAGTGAAGACCAATATTCAACAGGCAGTTGCAGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272902.10
ENST00000405420.2
ENST00000448413.5
CDS TCA 72 bp TCTCAGGCACTATTACATGGTATAGGCCCTAGTCTATaGGCTGGTCACATCATCCCTCTCCAAAGAGTATAT +
Preference number: 6 (lower is better)
Translates to: SQALLHGIGPSL*AGHIIPLQRVY
Trigger: ATATACTCTTTGGAGAGGGATGATGTGACCAGCTCATAGACTAGGGCCTATACCATGTAATAGTGCCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469888.1
CDS CAA 72 bp GGCTGTGTGTCTTCTCAACATCTCAGATGCCACATCTaGAAAATAGGGATCATAGTACTCTTGGGACCTATG +
Preference number: 6 (lower is better)
Translates to: GCVSSQHLRCHI*KIGIIVLLGPM
Trigger: CATAGGTCCCAAGAGTACTATGATCCCTATTTTCAAGATGTGGCATCTGAGATGTTGAGAAGACACACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448413.5
CDS GCA 72 bp AGAGCCCAACTTCTATCAGACAAACTCCATGCTATCTaGATGCTAACTCCATGGATAATCTGCATGAAAAGG +
Preference number: 6 (lower is better)
Translates to: RAQLLSDKLHAI*MLTPWIICMKR
Trigger: CCTTTTCATGCAGATTATCCATGGAGTTAGCATGCAGATAGCATGGAGTTTGTCTGATAGAAGTTGGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484993.1
CDS TCA 72 bp TTTGAGTACCTATTACATGGTATAGGCCCTAGTCTATaGGCTGGTCACATCATCCCTCTCCAAAGAGTATAT +
Preference number: 6 (lower is better)
Translates to: FEYLLHGIGPSL*AGHIIPLQRVY
Trigger: ATATACTCTTTGGAGAGGGATGATGTGACCAGCTCATAGACTAGGGCCTATACCATGTAATAGGTACTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484993.1
CDS GCA 72 bp TTTACTTATTTAAGAGCAATTCCATTCCACCCACTTTaGCTATTAGCATATCAGAGGTTCACACGCACACTA +
Preference number: 6 (lower is better)
Translates to: FTYLRAIPFHPL*LLAYQRFTRTL
Trigger: TAGTGTGCGTGTGAACCTCTGATATGCTAATAGGCAAAGTGGGTGGAATGGAATTGCTCTTAAATAAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470751.5
CDS CAA 72 bp TTTTACTTATTTAAGAGCAATTCCATTCCACCCACTTaGCCTATTAGCATATCAGAGGTTCACACGCACACT +
Preference number: 6 (lower is better)
Translates to: FYLFKSNSIPPT*PISISEVHTHT
Trigger: AGTGTGCGTGTGAACCTCTGATATGCTAATAGGCAAAGTGGGTGGAATGGAATTGCTCTTAAATAAGTAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470751.5