RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SULT4A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000130540

Ensembl transcript IDs: ENST00000330884.9, ENST00000422525.1, ENST00000432404.5, ENST00000475131.1

Found 410 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAACTCTTCCCCGGCCCACGGGCAGGGCCTCAGCGTTGCAGCACTaGTCCACCAGCTGGTGGCAGTGCTCCGTCAGGGCTTCCAGCTGG +
Preference number: 1 (lower is better)
Translates to: PTLPRPTGRASALQH*STSWWQCSVRASSW
Trigger: CCAGCTGGAAGCCCTGACGGAGCACTGCCACCAGCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGCCCGTGGGCCGGGGAAGAGTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR CCA 90 bp CCAGGCAGACTTCCCTCAGCACATGCTCCGCGGGCTCCTCTGCATTaGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGT +
Preference number: 1 (lower is better)
Translates to: PGRLPSAHAPRAPLH*AFGAARWKSLAEGR
Trigger: ACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAGCATGTGCTGAGGGAAGTCTGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 90 bp AGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATaGGATGCCACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTAC +
Preference number: 1 (lower is better)
Translates to: SLPHRNTGKVLPSPP*DATCHLPGHASPHY
Trigger: GTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 90 bp ACTTCCCTCAGCACATGCTCCGCGGGCTCCTCTGCATTGGGCCTTTaGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGTCCATTCTG +
Preference number: 1 (lower is better)
Translates to: TSLSTCSAGSSALGL*SRPLEVSGRRTSIL
Trigger: CAGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAGCATGTGCTGAGGGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 90 bp CCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATaGCACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTACAAACA +
Preference number: 1 (lower is better)
Translates to: PSQKHRQGAAEPTMR*HVPPAWPRFSPLQT
Trigger: TGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 90 bp ATTTCACAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTaGCGAGCCCACCATGCGATGCCACGTGCCACCTGCCTGGCCACG +
Preference number: 1 (lower is better)
Translates to: ISQKAASLTETQARC*RAHHAMPRATCLAT
Trigger: CGTGGCCAGGCAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTGTGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 90 bp GAAATTTCACAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTaGTGCCGAGCCCACCATGCGATGCCACGTGCCACCTGCCTGGCC +
Preference number: 1 (lower is better)
Translates to: EISQKAASLTETQAR*CRAHHAMPRATCLA
Trigger: GGCCAGGCAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTGTGAAATTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 90 bp ATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTaGATGCAAATGCTCCTGACTGCATTAGACTCCCACCTGCCAGCC +
Preference number: 1 (lower is better)
Translates to: IPSATRSFGGRLSTH*MQMLLTALDSHLPA
Trigger: GGCTGGCAGGTGGGAGTCTAATGCAGTCAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 90 bp CAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGCCACCTaGCTGGCCACGCTTCTCCCCATTACAAACAAAAACACAAGCTTC +
Preference number: 1 (lower is better)
Translates to: QARCCRAHHAMPRAT*LATLLPITNKNTSF
Trigger: GAAGCTTGTGTTTTTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 90 bp TCCAGCTGGGCCTTGTCACAGGACACCCCCAGGAATCTGGCCAGCTaGTCCACCATCGTCACCAGGTCCCGATGCATGTCTTCATACTTG +
Preference number: 1 (lower is better)
Translates to: SSWALSQDTPRNLAS*STIVTRSRCMSSYL
Trigger: CAAGTATGAAGACATGCATCGGGACCTGGTGACGATGGTGGAGCAGCTGGCCAGATTCCTGGGGGTGTCCTGTGACAAGGCCCAGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR CCA 90 bp CATGGAGAGGCTGCACGTTCTAAAGGCGAGACAGCTGCTTTCGGTTaGGAATCATCACACTCCCTCCGCTCACGCCGCTCTTCCCTTCCC +
Preference number: 1 (lower is better)
Translates to: HGEAARSKGETAAFG*ESSHSLRSRRSSLP
Trigger: GGGAAGGGAAGAGCGGCGTGAGCGGAGGGAGTGTGATGATTCCCAACCGAAAGCAGCTGTCTCGCCTTTAGAACGTGCAGCCTCTCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 90 bp AGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTaGCACCTGCCTGGCCACGCTTCTCCCCATTACAAACAAAAACAC +
Preference number: 1 (lower is better)
Translates to: RNTGKVLPSPPCDAT*HLPGHASPHYKQKH
Trigger: GTGTTTTTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 90 bp CAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGCCACCTGCCTaGCCACGCTTCTCCCCATTACAAACAAAAACACAAGCTTCTCTC +
Preference number: 1 (lower is better)
Translates to: QGAAEPTMRCHVPPA*PRFSPLQTKTQASL
Trigger: GAGAGAAGCTTGTGTTTTTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 90 bp GGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTaGCAGAAGGACGTCCATTCTGAAGACCTAGTGAACAATTTCTGC +
Preference number: 1 (lower is better)
Translates to: GLLCIGPLEPPAGSL*QKDVHSEDLVNNFC
Trigger: GCAGAAATTGTTCACTAGGTCTTCAGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 90 bp AAGGCTGTGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTaGTGGCCGACTCTCCACCCACTGCATGCAAATGCTCCTGACTGC +
Preference number: 1 (lower is better)
Translates to: KAVEFSSNSERNSVL*WPTLHPLHANAPDC
Trigger: GCAGTCAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCACAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 90 bp GCTGTGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTaGCCGACTCTCCACCCACTGCATGCAAATGCTCCTGACTGCATT +
Preference number: 1 (lower is better)
Translates to: AVEFSSNSERNSVLW*PTLHPLHANAPDCI
Trigger: AATGCAGTCAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR TCA 90 bp ATACAGCACCAAGAACGGAGACCCCTTCCACAGCAGCGACCCTCCTaGCCACCACTTTGGGTGCTTTCCAGCCACATAAATGACAGACAA +
Preference number: 1 (lower is better)
Translates to: IQHQERRPLPQQRPS*PPLWVLSSHINDRQ
Trigger: TTGTCTGTCATTTATGTGGCTGGAAAGCACCCAAAGTGGTGGTCAGGAGGGTCGCTGCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR TCA 90 bp CGACTCTCCATCGCTTCAGCGAATGTGGGTGAGAAAATTAGGCAGTaGAGCAATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGG +
Preference number: 1 (lower is better)
Translates to: RLSIASANVGEKIRQ*SNKDLTFTPSDTRR
Trigger: CCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTATTGCTTCACTGCCTAATTTTCTCACCCACATTCGCTGAAGCGATGGAGAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 90 bp TGCATATATTACAGGCTTTATCCTTACGGTCCAGGCCATTGGAACTaGAATGTGGAGACTGTTTGTAATCAGACATGGAGAGGCTGCACG +
Preference number: 1 (lower is better)
Translates to: CIYYRLYPYGPGHWN*NVETVCNQTWRGCT
Trigger: CGTGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAAGGATAAAGCCTGTAATATATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 90 bp ATTACAGGCTTTATCCTTACGGTCCAGGCCATTGGAACTGCAATGTaGAGACTGTTTGTAATCAGACATGGAGAGGCTGCACGTTCTAAA +
Preference number: 1 (lower is better)
Translates to: ITGFILTVQAIGTAM*RLFVIRHGEAARSK
Trigger: TTTAGAACGTGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAAGGATAAAGCCTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR TCA 90 bp GCTGTTTCACACGCTGCTTCCAGAGTTTGTCCAGCAAGGAATAAATaGATGCATACAGGACTTTTGGCTAGTAGACTGTCTGGGTATTGT +
Preference number: 1 (lower is better)
Translates to: AVSHAASRVCPARNK*MHTGLLASRLSGYC
Trigger: ACAATACCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCATTCATTTATTCCTTGCTGGACAAACTCTGGAAGCAGCGTGTGAAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 90 bp CTCTGGCAGAAGGACGTCCATTCTGAAGACCTAGTGAACAATTTCTaGTCATTTCAGGAAGGTTCTGAAGAAGTGAACTCCGTCAGAATA +
Preference number: 1 (lower is better)
Translates to: LWQKDVHSEDLVNNF*SFQEGSEEVNSVRI
Trigger: TATTCTGACGGAGTTCACTTCTTCAGAACCTTCCTGAAATGAGCAGAAATTGTTCACTAGGTCTTCAGAATGGACGTCCTTCTGCCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 90 bp TCTAGTTGCATATATTACAGGCTTTATCCTTACGGTCCAGGCCATTaGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: SSCIYYRLYPYGPGH*NCNVETVCNQTWRG
Trigger: GCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAAGGATAAAGCCTGTAATATATGCAACTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR TCA 90 bp CTTCCTGGTTTAGGATTTGGAATCAAGACAATTTATGCTGTGACATaGATCAAATCTAAGCAATGCAGCTGGCTACTCGGCCCTGCATTC +
Preference number: 1 (lower is better)
Translates to: LPGLGFGIKTIYAVT*IKSKQCSWLLGPAF
Trigger: GAATGCAGGGCCGAGTAGCCAGCTGCATTGCTTAGATTTGATTCATGTCACAGCATAAATTGTCTTGATTCCAAATCCTAAACCAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422525.1
3UTR CCA 90 bp CCAGAGTTTGTCCAGCAAGGAATAAATGAATGCATACAGGACTTTTaGCTAGTAGACTGTCTGGGTATTGTGAGCATGCAGGTTGTTGTT +
Preference number: 1 (lower is better)
Translates to: PEFVQQGINECIQDF*LVDCLGIVSMQVVV
Trigger: AACAACAACCTGCATGCTCACAATACCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCATTCATTTATTCCTTGCTGGACAAACTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR TCA 90 bp CAGACCCAACTCATCCTCTGTTCTCACCACTATCTCAGAACCAAGTaGGAACAGAATGGCTGTGCCTTAGATAATAAAACTACAAAAATA +
Preference number: 1 (lower is better)
Translates to: QTQLILCSHHYLRTK*EQNGCALDNKTTKI
Trigger: TATTTTTGTAGTTTTATTATCTAAGGCACAGCCATTCTGTTCTCACTTGGTTCTGAGATAGTGGTGAGAACAGAGGATGAGTTGGGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp CCCCGGCCCACGGGCAGGGCCTCAGCGTTGCAGCACTGGTCCACCAGCTGGTGGTGCCTCGGTAGCTCATaGTCCGCAGAGAGCGGTGGA +
Preference number: 2 (lower is better)
Translates to: PRPTGRASALQHWSTSWWCLGSS*SAESGG
Trigger: TCCACCGCTCTCTGCGGACCATGAGCTACCGAGGCA...CCACCAGCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGCCCGTGGGCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR GCA 90 bp AGCACATGCTCCGCGGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAACCAGCTGGTGGCAGTaGTCCGTCAGGGCTTCCAGC +
Preference number: 2 (lower is better)
Translates to: STCSAGSSALGLWSRPLETSWWQ*SVRASS
Trigger: GCTGGAAGCCCTGACGGAGCACTGCCACCAGCTGGT...TTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAGCATGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR CAA 90 bp ACCAGGCAGACTTCCCTCAGCACATGCTCCGCGGGCTCCTCTGCATaGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACG +
Preference number: 2 (lower is better)
Translates to: TRQTSLSTCSAGSSA*GLWSRPLEVSGRRT
Trigger: CGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAGCATGTGCTGAGGGAAGTCTGCCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp GCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACTCCGCGGGCTCCTCTaGATTGGGCCTTTGGAGCCG +
Preference number: 2 (lower is better)
Translates to: APLHWAFGAARWKSLAEGLRGLL*IGPLEP
Trigger: CGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAG...TCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp CCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGTCACGGAGGGATGAGGTaGACAGACACGCAGGCGGCC +
Preference number: 2 (lower is better)
Translates to: PLHWAFGAARWKSLAEGRHGGMR*TDTQAA
Trigger: GGCCGCCTGCGTGTCTGTCCACCTCATCCCTCCGTG...ACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp GCACCAAGAACGGAGACCCCTTCCACAGCAGCGACCCTCCTGACCACCACTTTGCCATGCGATGCCACGTaGCACCTGCCTGGCCACGCT +
Preference number: 2 (lower is better)
Translates to: APRTETPSTAATLLTTTLPCDAT*HLPGHA
Trigger: AGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGG...CAAAGTGGTGGTCAGGAGGGTCGCTGCTGTGGAAGGGGTCTCCGTTCTTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CAA 90 bp GACTTCCCTCAGCACATGCTCCGCGGGCTCCTCTGCATTGGGCCTTaGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGTCCATTCT +
Preference number: 2 (lower is better)
Translates to: DFPQHMLRGLLCIGP*EPPAGSLWQKDVHS
Trigger: AGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAGCATGTGCTGAGGGAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp CCCCGGCCCACGGGCAGGGCCTCAGCGTTGCAGCACTGGTCCACCAGCTGGTGGACTGTCTGGGTATTGTaGGCATGCAGGTTGTTGTTT +
Preference number: 2 (lower is better)
Translates to: PRPTGRASALQHWSTSWWTVWVL*ACRLLF
Trigger: AAACAACAACCTGCATGCTCACAATACCCAGACAGT...CCACCAGCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGCCCGTGGGCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR TCA 90 bp CGGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAAGATACACGGAGGGATaGGGTGGACAGACACGCAGG +
Preference number: 2 (lower is better)
Translates to: RAPLHWAFGAARWKSLAERYTEG*GGQTRR
Trigger: CCTGCGTGTCTGTCCACCTCATCCCTCCGTGTATCT...TTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp GAAACAGGGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCGCAGGGCCTCAGCGTTaGAGCACTGGTCCACCAGCT +
Preference number: 2 (lower is better)
Translates to: ETGLHSQNGPPTAERLRCAGPQR*STGPPA
Trigger: AGCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGC...GCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCCCTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR CCA 90 bp GAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGTCCATTCTGAAGACCTAGTGCACGGAGGGATGAGGTaGACAGACACGCAGGCGGCC +
Preference number: 2 (lower is better)
Translates to: EPPAGSLWQKDVHSEDLVHGGMR*TDTQAA
Trigger: GGCCGCCTGCGTGTCTGTCCACCTCATCCCTCCGTG...CACTAGGTCTTCAGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp CAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATCACGGAGGGATGAGGTaGACAGACACGCAGGCGGCC +
Preference number: 2 (lower is better)
Translates to: QKAASLTETQARCCRAHHHGGMR*TDTQAA
Trigger: GGCCGCCTGCGTGTCTGTCCACCTCATCCCTCCGTG...ATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGATTTGGAGCCGCCCGCTaGAAGTCTCTGGCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: APLHWAFGAARWKSLAEGFGAAR*KSLAEG
Trigger: TCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAA...TCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp CCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGTTTTGGAGCCGCCCGCTaGAAGTCTCTGGCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: PLHWAFGAARWKSLAEGRFGAAR*KSLAEG
Trigger: TCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAA...ACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGTGAGATCTGCATTGGGCCTTTaGAGCCGCCCGCTGGAAGTC +
Preference number: 2 (lower is better)
Translates to: VGWLLAPDSPSLQRMWVRSALGL*SRPLEV
Trigger: GACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGA...TCTCACCCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCACAGAACTCTGCATTGGGCCTTTaGAGCCGCCCGCTGGAAGTC +
Preference number: 2 (lower is better)
Translates to: GYTRKMVLPRLSASGAQNSALGL*SRPLEV
Trigger: GACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGA...GTTCTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp CGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCACAGAACAAACTGAATCGGGCTCCTCTGCATTaGGCCTTTGGAGCCGCCCGC +
Preference number: 2 (lower is better)
Translates to: RKMVLPRLSASGAQNKLNRAPLH*AFGAAR
Trigger: GCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCG...ATTCAGTTTGTTCTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCACAGAACCGCAACTCGGTCCTTTaGTGGCCGACTCTCCACCCA +
Preference number: 2 (lower is better)
Translates to: GYTRKMVLPRLSASGAQNRNSVL*WPTLHP
Trigger: TGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCG...GTTCTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GAAACAGGGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCCGCAACTCGGTCCTTTaGTGGCCGACTCTCCACCCA +
Preference number: 2 (lower is better)
Translates to: ETGLHSQNGPPTAERLRCRNSVL*WPTLHP
Trigger: TGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCG...GCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCCCTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GAAACAGGGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCTCAGCGTTGCAGCACTaGTCCACCAGCTGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: ETGLHSQNGPPTAERLRCSALQH*STSWWQ
Trigger: CTGCCACCAGCTGGTGGACCAGTGCTGCAACGCTGA...GCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCCCTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR GCA 90 bp CAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATACTTCCCTCAGCACATaGTCCGCGGGCTCCTCTGCA +
Preference number: 2 (lower is better)
Translates to: QKAASLTETQARCCRAHHTSLST*SAGSSA
Trigger: TGCAGAGGAGCCCGCGGAGCATGTGCTGAGGGAAGT...ATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp CCACGGGGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGCAAATGCTCCTGACTaGATTAGACTCCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: PRGWLATGPRLSIASANVANAPD*IRLPPA
Trigger: GGCAGGTGGGAGTCTAATGCAGTCAGGAGCATTTGC...CACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACCCCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp CAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGAAACACAGGCAAGGTaGTGCCGAGCCCACCATGCG +
Preference number: 2 (lower is better)
Translates to: QKAASLTETQARCCRAHHETQAR*CRAHHA
Trigger: CGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTC...ATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp GCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGATGCTCCCAGAACTCCTaGACGTGCTCAAACCAGGAG +
Preference number: 2 (lower is better)
Translates to: APLHWAFGAARWKSLAEGCSQNS*TCSNQE
Trigger: CTCCTGGTTTGAGCACGTGCAGGAGTTCTGGGAGCA...TCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR CCA 90 bp AGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGCCACCTGTCTACCATTCGGGTGTaGCTCGCTCCTGATTCCCCT +
Preference number: 2 (lower is better)
Translates to: RNTGKVLPSPPCDATCHLSTIRV*LAPDSP
Trigger: AGGGGAATCAGGAGCGAGCCACACCCGAATGGTAGA...CAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGTGAGATTTGGAGCCGCCCGCTaGAAGTCTCTGGCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: VGWLLAPDSPSLQRMWVRFGAAR*KSLAEG
Trigger: TCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAA...TCTCACCCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp CAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGTCAGGGCTTCCAGCTaGGCCTTGTCACAGGACACC +
Preference number: 2 (lower is better)
Translates to: QKAASLTETQARCCRAHHVRASS*ALSQDT
Trigger: GGTGTCCTGTGACAAGGCCCAGCTGGAAGCCCTGAC...ATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR TCA 90 bp AGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGCCACCTGCATTCATGGAGACGGTaGAGATGTCCTTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: RNTGKVLPSPPCDATCHLHSWRR*RCPSTA
Trigger: GGCTGTGGAAGGACATCTTCACCGTCTCCATGAATG...CAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp AGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGCCACCTGCGCTGTTTCACACGCTaGTTCCAGAGTTTGTCCAGC +
Preference number: 2 (lower is better)
Translates to: RNTGKVLPSPPCDATCHLRCFTR*FQSLSS
Trigger: GCTGGACAAACTCTGGAAGCAGCGTGTGAAACAGCG...CAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp CCCACCATGCGATGCCACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTACAAGCAAATGCTCCTGACTaGATTAGACTCCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: PTMRCHVPPAWPRFSPLQANAPD*IRLPPA
Trigger: GGCAGGTGGGAGTCTAATGCAGTCAGGAGCATTTGC...TTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGTCCATTCTGAAGCCCGCTGGAAGTCTCTaGCAGAAGGACGTCCATTCT +
Preference number: 2 (lower is better)
Translates to: GLWSRPLEVSGRRTSILKPAGSL*QKDVHS
Trigger: AGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGG...CTTCAGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp ATGCTCCGCGGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCACTGTCTGGGTATTGTaGGCATGCAGGTTGTTGTTT +
Preference number: 2 (lower is better)
Translates to: MLRGLLCIGPLEPPAGSLTVWVL*ACRLLF
Trigger: AAACAACAACCTGCATGCTCACAATACCCAGACAGT...GAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp CCATGCGATGCCACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTACAAACAAGGTGTGGCTCGCTCCTaGTTCCCCTTGGAAATGAAC +
Preference number: 2 (lower is better)
Translates to: PCDATCHLPGHASPHYKQGVARS*FPLEMN
Trigger: GTTCATTTCCAAGGGGAATCAGGAGCGAGCCACACC...TTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp GAGGTGGACAGACACGCAGGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTGCGAGCCATATAGATaGCCTTGGAGTCTCCATTGT +
Preference number: 2 (lower is better)
Translates to: EVDRHAGGRANLIRVKQGCEPYR*PWSLHC
Trigger: ACAATGGAGACTCCAAGGTCATCTATATGGCTCGCA...GCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTGTCTGTCCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR GCA 90 bp GAGGTGGACAGACACGCAGGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCAGAATTCTTGAAAGGTaGCTCGGTAGCTCATGGTCC +
Preference number: 2 (lower is better)
Translates to: EVDRHAGGRANLIRVKQGRILER*LGSSWS
Trigger: GGACCATGAGCTACCGAGGCACCTTTCAAGAATTCT...GCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTGTCTGTCCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR GCA 90 bp GGCTGTGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTTCGAGTCCATGCGGTaGTCCCAGAACTCCTGCACG +
Preference number: 2 (lower is better)
Translates to: GCGIQLKFRAQLGPLVADFESMR*SQNSCT
Trigger: CGTGCAGGAGTTCTGGGAGCACCGCATGGACTCGAA...GTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR GCA 90 bp ATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCAACGCTGTTTCACACGCTaGTTCCAGAGTTTGTCCAGC +
Preference number: 2 (lower is better)
Translates to: IPSATRSFGGRLSTHCMQRCFTR*FQSLSS
Trigger: GCTGGACAAACTCTGGAAGCAGCGTGTGAAACAGCG...TTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp CCCACCATGCGATGCCACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTACAAATCAAATCTAAGCAATaGAGCTGGCTACTCGGCCCT +
Preference number: 2 (lower is better)
Translates to: PTMRCHVPPAWPRFSPLQIKSKQ*SWLLGP
Trigger: AGGGCCGAGTAGCCAGCTGCATTGCTTAGATTTGAT...TTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422525.1
3UTR-3UTR CCA 90 bp ATCATCACACTCCCTCCGCTCACGCCGCTCTTCCCTTCCCCCGCTGTTTCACACTACGGTCCAGGCCATTaGAACTGCAATGTGGAGACT +
Preference number: 2 (lower is better)
Translates to: IITLPPLTPLFPSPAVSHYGPGH*NCNVET
Trigger: AGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTA...GTGTGAAACAGCGGGGGAAGGGAAGAGCGGCGTGAGCGGAGGGAGTGTGATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GGCTGTGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTACCATTCGGGTGTaGCTCGCTCCTGATTCCCCT +
Preference number: 2 (lower is better)
Translates to: GCGIQLKFRAQLGPLVADSTIRV*LAPDSP
Trigger: AGGGGAATCAGGAGCGAGCCACACCCGAATGGTAGA...GTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp GAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACGGTGTGGCTCGCTCCTaGTTCCCCTTGGAAATGAAC +
Preference number: 2 (lower is better)
Translates to: EFSSNSERNSVLWWPTLHGVARS*FPLEMN
Trigger: GTTCATTTCCAAGGGGAATCAGGAGCGAGCCACACC...GTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp AAGAACGGAGACCCCTTCCACAGCAGCGACCCTCCTGACCACCACTTTGGGTGCTATCTCAGAACCAAGTaGGAACAGAATGGCTGTGCC +
Preference number: 2 (lower is better)
Translates to: KNGDPFHSSDPPDHHFGCYLRTK*EQNGCA
Trigger: GGCACAGCCATTCTGTTCTCACTTGGTTCTGAGATA...GCACCCAAAGTGGTGGTCAGGAGGGTCGCTGCTGTGGAAGGGGTCTCCGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp TCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCAGACACGCAGGCGGCCGTaGCAACCTGATCCGAGTGAA +
Preference number: 2 (lower is better)
Translates to: SLHPFQIQHQERRPLPQQTRRRP*QPDPSE
Trigger: TTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTGT...CTGCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp ACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTACAAACAAAAACACAAGCTTACACGCAGGCGGCCGTaGCAACCTGATCCGAGTGAA +
Preference number: 2 (lower is better)
Translates to: TCHLPGHASPHYKQKHKLTRRRP*QPDPSE
Trigger: TTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTGT...AAGCTTGTGTTTTTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGATGCATACAGGACTTTTaGCTAGTAGACTGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: APLHWAFGAARWKSLAEGCIQDF*LVDCLG
Trigger: ACCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCA...TCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp CAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGCCACCTTGCATACAGGACTTTTaGCTAGTAGACTGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: QKHRQGAAEPTMRCHVPPCIQDF*LVDCLG
Trigger: ACCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCA...AGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp TCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCAAATGCTCCTGACTGCACAGCTGCTTTCGGTTaGGAATCATCACACTCCCTC +
Preference number: 2 (lower is better)
Translates to: SVLWWPTLHPLHANAPDCTAAFG*ESSHSL
Trigger: GAGGGAGTGTGATGATTCCCAACCGAAAGCAGCTGT...GCAGTCAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp TGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCCCCGCTGGAAGTCTCTaGCAGAAGGACGTCCATTCT +
Preference number: 2 (lower is better)
Translates to: WNSAQIPSATRSFGGRLSPAGSL*QKDVHS
Trigger: AGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGG...GGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp GGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGACAATAATACGGGGTTaGAAAGGCAGACATTCTAGT +
Preference number: 2 (lower is better)
Translates to: GLLCIGPLEPPAGSLWQKTIIRG*KGRHSS
Trigger: ACTAGAATGTCTGCCTTTTCAACCCCGTATTATTGT...CTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp CAGGGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCACAGGCATGTCTTCATACTTaGGAAAAAGCACGTTCGAGT +
Preference number: 2 (lower is better)
Translates to: QGYTRKMVLPRLSASGAQACLHT*EKARSS
Trigger: ACTCGAACGTGCTTTTTCTCAAGTATGAAGACATGC...CTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR CCA 90 bp AAGAACGGAGACCCCTTCCACAGCAGCGACCCTCCTGACCACCACTTTGGGTGCTGCATACAGGACTTTTaGCTAGTAGACTGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: KNGDPFHSSDPPDHHFGCCIQDF*LVDCLG
Trigger: ACCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCA...GCACCCAAAGTGGTGGTCAGGAGGGTCGCTGCTGTGGAAGGGGTCTCCGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GCGGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAATTGGAACTGCAATGTaGAGACTGTTTGTAATCAGA +
Preference number: 2 (lower is better)
Translates to: AGSSALGLWSRPLEVSGRIGTAM*RLFVIR
Trigger: TCTGATTACAAACAGTCTCCACATTGCAGTTCCAAT...TCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp TCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCAACTCGGTCCTTTGGTaGCCGACTCTCCACCCACTG +
Preference number: 2 (lower is better)
Translates to: SLYTRFKYSTKNGDPFHSNSVLW*PTLHPL
Trigger: CAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTT...GCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp CACGGGGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGAACAAAGTAAGGCTGTaGAATTCAGCTCAAATTCCG +
Preference number: 2 (lower is better)
Translates to: HGVGWLLAPDSPSLQRMWNKVRL*NSAQIP
Trigger: CGGAATTTGAGCTGAATTCCACAGCCTTACTTTGTT...CCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACCCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp GGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAATGGTCATTTCAGGAAGGTTCTaGAGAAGTGAACTCCGTCAG +
Preference number: 2 (lower is better)
Translates to: GGRANLIRVKQGYTRKMVISGRF*RSELRQ
Trigger: CTGACGGAGTTCACTTCTTCAGAACCTTCCTGAAAT...GACCATTTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp GCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGAAATAAAAGTCAAACGTaGGGTCACACTTTCCCATCT +
Preference number: 2 (lower is better)
Translates to: APLHWAFGAARWKSLAEGNKSQT*GHTFPS
Trigger: AGATGGGAAAGTGTGACCTCACGTTTGACTTTTATT...TCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp GGCCGACTCTCCACCCACTGCATGCAAATGCTCCTGACTGCATTAGACTCCCACGTCACCAGGTCCCGATaGATGTCTTCATACTTGAGA +
Preference number: 2 (lower is better)
Translates to: GRLSTHCMQMLLTALDSHVTRSR*MSSYLR
Trigger: TCTCAAGTATGAAGACATGCATCGGGACCTGGTGAC...GTGGGAGTCTAATGCAGTCAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR CCA 90 bp CCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGAACAAAGTAAGGCTGTaGAATTCAGCTCAAATTCCG +
Preference number: 2 (lower is better)
Translates to: PSQKHRQGAAEPTMRCHVNKVRL*NSAQIP
Trigger: CGGAATTTGAGCTGAATTCCACAGCCTTACTTTGTT...CACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp ACCTGCCTGGCCACGCTTCTCCCCATTACAAACAAAAACACAAGCTTCTCTCTACACGTGCCACCTGCCTaGCCACGCTTCTCCCCATTA +
Preference number: 2 (lower is better)
Translates to: TCLATLLPITNKNTSFSLHVPPA*PRFSPL
Trigger: TAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTG...TAGAGAGAAGCTTGTGTTTTTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp ACCTGCCTGGCCACGCTTCTCCCCATTACAAACAAAAACACAAGCTTCTCTCTAAGATACACGGAGGGATaGGGTGGACAGACACGCAGG +
Preference number: 2 (lower is better)
Translates to: TCLATLLPITNKNTSFSLRYTEG*GGQTRR
Trigger: CCTGCGTGTCTGTCCACCTCATCCCTCCGTGTATCT...TAGAGAGAAGCTTGTGTTTTTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp GTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGTGAGAAATAAAAGTCAAACGTaGGGTCACACTTTCCCATCT +
Preference number: 2 (lower is better)
Translates to: VGWLLAPDSPSLQRMWVRNKSQT*GHTFPS
Trigger: AGATGGGAAAGTGTGACCTCACGTTTGACTTTTATT...TCTCACCCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp CCACGGGGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGCAAGGAATAAATGAATaGATACAGGACTTTTGGCTA +
Preference number: 2 (lower is better)
Translates to: PRGWLATGPRLSIASANVQGINE*IQDFWL
Trigger: TAGCCAAAAGTCCTGTATGCATTCATTTATTCCTTG...CACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACCCCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp TGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGTGAGAAAATTAACAGCTGCTTTCGGTTaGGAATCATCACACTCCCTC +
Preference number: 2 (lower is better)
Translates to: WLLAPDSPSLQRMWVRKLTAAFG*ESSHSL
Trigger: GAGGGAGTGTGATGATTCCCAACCGAAAGCAGCTGT...TAATTTTCTCACCCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp AGTGAAGCAATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGGGATGAGGAACTCGGTCCTTTGGTaGCCGACTCTCCACCCACTG +
Preference number: 2 (lower is better)
Translates to: SEAIKTSPLLPQIHGGMRNSVLW*PTLHPL
Trigger: CAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTT...CCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTATTGCTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp TCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCAGTCTAAGCAATGCAGCTaGCTACTCGGCCCTGCATTC +
Preference number: 2 (lower is better)
Translates to: SLHPFQIQHQERRPLPQQSKQCS*LLGPAF
Trigger: GAATGCAGGGCCGAGTAGCCAGCTGCATTGCTTAGA...CTGCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422525.1
3UTR-3UTR TCA 90 bp CGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCACAGAACAAACTGAATACTGTCTGGGTATTGTaGGCATGCAGGTTGTTGTTT +
Preference number: 2 (lower is better)
Translates to: RKMVLPRLSASGAQNKLNTVWVL*ACRLLF
Trigger: AAACAACAACCTGCATGCTCACAATACCCAGACAGT...ATTCAGTTTGTTCTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp AAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCACAATAATACGGGGTTaGAAAGGCAGACATTCTAGT +
Preference number: 2 (lower is better)
Translates to: KFRAQLGPLVADSPPTACTIIRG*KGRHSS
Trigger: ACTAGAATGTCTGCCTTTTCAACCCCGTATTATTGT...GCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp CCATGCGATGCCACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTACAAACAATTACTATTAAGCATCTaGTTGCCAGCATTAGTAGGC +
Preference number: 2 (lower is better)
Translates to: PCDATCHLPGHASPHYKQLLLSI*LPALVG
Trigger: GCCTACTAATGCTGGCAAGCAGATGCTTAATAGTAA...TTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp AGAGTTAACCCTGAGATCTTTCTACCATTCGGGTGTGGCTCGCTCCTGATTCCCTACGGTCCAGGCCATTaGAACTGCAATGTGGAGACT +
Preference number: 2 (lower is better)
Translates to: RVNPEIFLPFGCGSLLIPYGPGH*NCNVET
Trigger: AGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTA...GGGAATCAGGAGCGAGCCACACCCGAATGGTAGAAAGATCTCAGGGTTAACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GCTGGAAGTCTCTGGCAGAAGGACGTCCATTCTGAAGACCTAGTGAACAATTTCCCCGCTGGAAGTCTCTaGCAGAAGGACGTCCATTCT +
Preference number: 2 (lower is better)
Translates to: AGSLWQKDVHSEDLVNNFPAGSL*QKDVHS
Trigger: AGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGG...GAAATTGTTCACTAGGTCTTCAGAATGGACGTCCTTCTGCCAGAGACTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAATGGTCAACAAAGTAAGGCTGTaGAATTCAGCTCAAATTCCG +
Preference number: 2 (lower is better)
Translates to: GGRANLIRVKQGYTRKMVNKVRL*NSAQIP
Trigger: CGGAATTTGAGCTGAATTCCACAGCCTTACTTTGTT...GACCATTTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp AAATTTCACAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGTATCTCAGAACCAAGTaGGAACAGAATGGCTGTGCC +
Preference number: 2 (lower is better)
Translates to: KFHRKQPPSQKHRQGAAEYLRTK*EQNGCA
Trigger: GGCACAGCCATTCTGTTCTCACTTGGTTCTGAGATA...CTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTGTGAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp CAAAAACACAAGCTTCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGAGATACACGGAGGGATaGGGTGGACAGACACGCAGG +
Preference number: 2 (lower is better)
Translates to: QKHKLLSTPVSNTAPRTERYTEG*GGQTRR
Trigger: CCTGCGTGTCTGTCCACCTCATCCCTCCGTGTATCT...CTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGAAGCTTGTGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp ACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTACAAACAAAAACACAAGCTTCCAGGCCATTGGAACTaGAATGTGGAGACTGTTTGT +
Preference number: 2 (lower is better)
Translates to: TCHLPGHASPHYKQKHKLPGHWN*NVETVC
Trigger: ACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGG...AAGCTTGTGTTTTTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp CAAAAACACAAGCTTCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGGCACGTTCGAGTCCATaGGGTGCTCCCAGAACTCCT +
Preference number: 2 (lower is better)
Translates to: QKHKLLSTPVSNTAPRTEARSSP*GAPRTP
Trigger: AGGAGTTCTGGGAGCACCGCATGGACTCGAACGTGC...CTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGAAGCTTGTGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR CCA 90 bp TCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCAAATGCTCCTGACTGCATTGGAACTGCAATGTaGAGACTGTTTGTAATCAGA +
Preference number: 2 (lower is better)
Translates to: SVLWWPTLHPLHANAPDCIGTAM*RLFVIR
Trigger: TCTGATTACAAACAGTCTCCACATTGCAGTTCCAAT...GCAGTCAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp ATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGGGATGAGGTGGACAGACTACGGTCCAGGCCATTaGAACTGCAATGTGGAGACT +
Preference number: 2 (lower is better)
Translates to: IKTSPLLPQIHGGMRWTDYGPGH*NCNVET
Trigger: AGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTA...GTCTGTCCACCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp CAAAAACACAAGCTTCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGAACTCGGTCCTTTGGTaGCCGACTCTCCACCCACTG +
Preference number: 2 (lower is better)
Translates to: QKHKLLSTPVSNTAPRTENSVLW*PTLHPL
Trigger: CAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTT...CTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGAAGCTTGTGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GCTGTGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCAGCCCAACTCTTCCTaGTTTAGGATTTGGAATCAA +
Preference number: 2 (lower is better)
Translates to: AVEFSSNSERNSVLWWPTQPNSS*FRIWNQ
Trigger: TTGATTCCAAATCCTAAACCAGGAAGAGTTGGGCTG...AGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422525.1
3UTR-3UTR TCA 90 bp GCAATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGGGATGAGGTGGACATATCTCAGAACCAAGTaGGAACAGAATGGCTGTGCC +
Preference number: 2 (lower is better)
Translates to: AIKTSPLLPQIHGGMRWTYLRTK*EQNGCA
Trigger: GGCACAGCCATTCTGTTCTCACTTGGTTCTGAGATA...TGTCCACCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR TCA 90 bp CAAAAACACAAGCTTCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGTTCCAGCCACATAAATaGCAGACAACCCCGGTCCCC +
Preference number: 2 (lower is better)
Translates to: QKHKLLSTPVSNTAPRTEFQPHK*QTTPVP
Trigger: GGGGACCGGGGTTGTCTGTCATTTATGTGGCTGGAA...CTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGAAGCTTGTGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp AAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCCAAGGAATAAATGAATaGATACAGGACTTTTGGCTA +
Preference number: 2 (lower is better)
Translates to: KFRAQLGPLVADSPPTACQGINE*IQDFWL
Trigger: TAGCCAAAAGTCCTGTATGCATTCATTTATTCCTTG...GCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp GGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAATGGTCGGCAGACATTCTAGTTaGATATATTACAGGCTTTAT +
Preference number: 2 (lower is better)
Translates to: GGRANLIRVKQGYTRKMVGRHSS*IYYRLY
Trigger: ATAAAGCCTGTAATATATGCAACTAGAATGTCTGCC...GACCATTTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp TTTACTATTAAGCATCTGCTTGCCAGCATTAGTAGGCTATCACTTCAGGAAACATGGTCCACCAGCTGGTaGCAGTGCTCCGTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: FTIKHLLASISRLSLQETWSTSW*QCSVRA
Trigger: AGCCCTGACGGAGCACTGCCACCAGCTGGTGGACCA...TGTTTCCTGAAGTGATAGCCTACTAATGCTGGCAAGCAGATGCTTAATAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR TCA 90 bp TTCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGATTTCAGGAAGGTTCTaGAGAAGTGAACTCCGTCAG +
Preference number: 2 (lower is better)
Translates to: FSLHPFQIQHQERRPLPQISGRF*RSELRQ
Trigger: CTGACGGAGTTCACTTCTTCAGAACCTTCCTGAAAT...CTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACTCCTGGTTTAGGATTTaGAATCAAGACAATTTATGC +
Preference number: 2 (lower is better)
Translates to: EFSSNSERNSVLWWPTLHSWFRI*NQDNLC
Trigger: GCATAAATTGTCTTGATTCCAAATCCTAAACCAGGA...GTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422525.1
3UTR-3UTR TCA 90 bp TTTACTATTAAGCATCTGCTTGCCAGCATTAGTAGGCTATCACTTCAGGAAACACATTCATGGAGACGGTaGAGATGTCCTTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: FTIKHLLASISRLSLQETHSWRR*RCPSTA
Trigger: GGCTGTGGAAGGACATCTTCACCGTCTCCATGAATG...TGTTTCCTGAAGTGATAGCCTACTAATGCTGGCAAGCAGATGCTTAATAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CCA 90 bp GCAATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGGGATGAGGTGGACAATTGGAACTGCAATGTaGAGACTGTTTGTAATCAGA +
Preference number: 2 (lower is better)
Translates to: AIKTSPLLPQIHGGMRWTIGTAM*RLFVIR
Trigger: TCTGATTACAAACAGTCTCCACATTGCAGTTCCAAT...TGTCCACCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp GTCAAACTTCTCATTCATGGAGACGGTGAAGATGTCCTTCCACAGCCCAACTCTGGCAGACATTCTAGTTaGATATATTACAGGCTTTAT +
Preference number: 2 (lower is better)
Translates to: VKLLIHGDGEDVLPQPNSGRHSS*IYYRLY
Trigger: ATAAAGCCTGTAATATATGCAACTAGAATGTCTGCC...AGAGTTGGGCTGTGGAAGGACATCTTCACCGTCTCCATGAATGAGAAGTTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp ATGCATACAGGACTTTTGGCTAGTAGACTGTCTGGGTATTGTGAGCATGCAGGTCAAGGAATAAATGAATaGATACAGGACTTTTGGCTA +
Preference number: 2 (lower is better)
Translates to: MHTGLLASRLSGYCEHAGQGINE*IQDFWL
Trigger: TAGCCAAAAGTCCTGTATGCATTCATTTATTCCTTG...ACCTGCATGCTCACAATACCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR GCA 90 bp TTTACTATTAAGCATCTGCTTGCCAGCATTAGTAGGCTATCACTTCAGGAAACACTAGTGAACAATTTCTaGTCATTTCAGGAAGGTTCT +
Preference number: 2 (lower is better)
Translates to: FTIKHLLASISRLSLQETLVNNF*SFQEGS
Trigger: AGAACCTTCCTGAAATGAGCAGAAATTGTTCACTAG...TGTTTCCTGAAGTGATAGCCTACTAATGCTGGCAAGCAGATGCTTAATAGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 72 bp CCCCGGCCCACGGGCAGGGCCTCAGCGTTGCAGCACTaGTCCACCAGCTGGTGGCAGTGCTCCGTCAGGGCT +
Preference number: 3 (lower is better)
Translates to: PRPTGRASALQH*STSWWQCSVRA
Trigger: AGCCCTGACGGAGCACTGCCACCAGCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGCCCGTGGGCCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR CAA 90 bp CAGGGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCACAGGCGGGCTCCTCTGCATaGGGCCTTTGGAGCCGCCCG +
Preference number: 3 (lower is better)
Translates to: QGYTRKMVLPRLSASGAQAGSSA*GLWSRP
Trigger: CGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGC...CTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 72 bp AGCACATGCTCCGCGGGCTCCTCTGCATTGGGCCTTTaGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACG +
Preference number: 3 (lower is better)
Translates to: STCSAGSSALGL*SRPLEVSGRRT
Trigger: CGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAGCATGTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 72 bp CACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATaGGATGCCACGTGCCACCTGCCTGGCCACGCTTCT +
Preference number: 3 (lower is better)
Translates to: HRNTGKVLPSPP*DATCHLPGHAS
Trigger: AGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CAA 90 bp GGCTGTGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACGGCAGGGCCTCAGCGTaGCAGCACTGGTCCACCAGC +
Preference number: 3 (lower is better)
Translates to: GCGIQLKFRAQLGPLVADGRASA*QHWSTS
Trigger: GCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGCC...GTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR GCA 72 bp AAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTaGCGAGCCCACCATGCGATGCCACGTGCCACCTGC +
Preference number: 3 (lower is better)
Translates to: KAASLTETQARC*RAHHAMPRATC
Trigger: GCAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 72 bp CAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTaGTGCCGAGCCCACCATGCGATGCCACGTGCCACC +
Preference number: 3 (lower is better)
Translates to: QKAASLTETQAR*CRAHHAMPRAT
Trigger: GGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CAA 90 bp GCGATGCCACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTACAAACAAAAACGCGCAACTCGGTCCTTaGGTGGCCGACTCTCCACCC +
Preference number: 3 (lower is better)
Translates to: AMPRATCLATLLPITNKNAQLGP*VADSPP
Trigger: GGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGC...GTTTTTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CAA 90 bp TGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCGCGCAACTCGGTCCTTaGGTGGCCGACTCTCCACCC +
Preference number: 3 (lower is better)
Translates to: WNSAQIPSATRSFGGRLSAQLGP*VADSPP
Trigger: GGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGC...GGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR TCA 72 bp AGACCTCACCTTTACTCCCTCAGATACACGGAGGGATaGGGTGGACAGACACGCAGGCGGCCGTGCCAACCT +
Preference number: 3 (lower is better)
Translates to: RPHLYSLRYTEG*GGQTRRRPCQP
Trigger: AGGTTGGCACGGCCGCCTGCGTGTCTGTCCACCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 72 bp TGCTGCCGAGCCCACCATGCGATGCCACGTGCCACCTaGCTGGCCACGCTTCTCCCCATTACAAACAAAAAC +
Preference number: 3 (lower is better)
Translates to: CCRAHHAMPRAT*LATLLPITNKN
Trigger: GTTTTTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 72 bp GCTGCACGTTCTAAAGGCGAGACAGCTGCTTTCGGTTaGGAATCATCACACTCCCTCCGCTCACGCCGCTCT +
Preference number: 3 (lower is better)
Translates to: AARSKGETAAFG*ESSHSLRSRRS
Trigger: AGAGCGGCGTGAGCGGAGGGAGTGTGATGATTCCCAACCGAAAGCAGCTGTCTCGCCTTTAGAACGTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 72 bp GCCGAGCCCACCATGCGATGCCACGTGCCACCTGCCTaGCCACGCTTCTCCCCATTACAAACAAAAACACAA +
Preference number: 3 (lower is better)
Translates to: AEPTMRCHVPPA*PRFSPLQTKTQ
Trigger: TTGTGTTTTTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGGTGGGCTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 72 bp GCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTaGATGCAAATGCTCCTGACTGCATTAGACTCCCAC +
Preference number: 3 (lower is better)
Translates to: ATRSFGGRLSTH*MQMLLTALDSH
Trigger: GTGGGAGTCTAATGCAGTCAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 72 bp TGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTaGCAGAAGGACGTCCATTCTGAAGACCTAGTGAAC +
Preference number: 3 (lower is better)
Translates to: CIGPLEPPAGSL*QKDVHSEDLVN
Trigger: GTTCACTAGGTCTTCAGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CAA 90 bp GGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCACAGAACATGCATACAGGACTTTaGGCTAGTAGACTGTCTGGG +
Preference number: 3 (lower is better)
Translates to: GYTRKMVLPRLSASGAQNMHTGL*ASRLSG
Trigger: CCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCAT...GTTCTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CAA 90 bp GCACCAAGAACGGAGACCCCTTCCACAGCAGCGACCCTCCTGACCACCACTTTGATGCATACAGGACTTTaGGCTAGTAGACTGTCTGGG +
Preference number: 3 (lower is better)
Translates to: APRTETPSTAATLLTTTLMHTGL*ASRLSG
Trigger: CCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCAT...CAAAGTGGTGGTCAGGAGGGTCGCTGCTGTGGAAGGGGTCTCCGTTCTTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CAA 90 bp AGTGAAGCAATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGGGATGAGGGCGCAACTCGGTCCTTaGGTGGCCGACTCTCCACCC +
Preference number: 3 (lower is better)
Translates to: SEAIKTSPLLPQIHGGMRAQLGP*VADSPP
Trigger: GGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGC...CCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTATTGCTTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 72 bp TTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTaGCCGACTCTCCACCCACTGCATGCAAATGCTCCT +
Preference number: 3 (lower is better)
Translates to: FSSNSERNSVLW*PTLHPLHANAP
Trigger: AGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CAA 90 bp GGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAATGGTCATGCATACAGGACTTTaGGCTAGTAGACTGTCTGGG +
Preference number: 3 (lower is better)
Translates to: GGRANLIRVKQGYTRKMVMHTGL*ASRLSG
Trigger: CCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCAT...GACCATTTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CAA 90 bp CAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGCCACCTTGCATGTCTTCATACTaGAGAAAAAGCACGTTCGAG +
Preference number: 3 (lower is better)
Translates to: QKHRQGAAEPTMRCHVPPCMSSY*RKSTFE
Trigger: CTCGAACGTGCTTTTTCTCAAGTATGAAGACATGCA...AGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR TCA 72 bp CCATCGTCACCAGGTCCCGATGCATGTCTTCATACTTaGGAAAAAGCACGTTCGAGTCCATGCGGTGCTCCC +
Preference number: 3 (lower is better)
Translates to: PSSPGPDACLHT*EKARSSPCGAP
Trigger: GGGAGCACCGCATGGACTCGAACGTGCTTTTTCTCAAGTATGAAGACATGCATCGGGACCTGGTGACGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR CCA 72 bp GAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTaGTGGCCGACTCTCCACCCACTGCATGCAAATGCT +
Preference number: 3 (lower is better)
Translates to: EFSSNSERNSVL*WPTLHPLHANA
Trigger: AGCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CAA 90 bp AAATTTCACAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGGACAGCTGCTTTCGGTaGGGAATCATCACACTCCCT +
Preference number: 3 (lower is better)
Translates to: KFHRKQPPSQKHRQGAAEDSCFR*GIITLP
Trigger: AGGGAGTGTGATGATTCCCAACCGAAAGCAGCTGTC...CTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTGTGAAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CAA 90 bp TTCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGTTACGGTCCAGGCCATaGGAACTGCAATGTGGAGAC +
Preference number: 3 (lower is better)
Translates to: FSLHPFQIQHQERRPLPQLRSRP*ELQCGD
Trigger: GTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAA...CTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CAA 90 bp ATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGGGATGAGGTGGACAGACTTACGGTCCAGGCCATaGGAACTGCAATGTGGAGAC +
Preference number: 3 (lower is better)
Translates to: IKTSPLLPQIHGGMRWTDLRSRP*ELQCGD
Trigger: GTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAA...GTCTGTCCACCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 72 bp TCCGGCAGAATTCTTGAAAGGTGCCTCGGTAGCTCATaGTCCGCAGAGAGCGGTGGAACTGATAATAAGACA +
Preference number: 3 (lower is better)
Translates to: SGRILERCLGSS*SAESGGTDNKT
Trigger: TGTCTTATTATCAGTTCCACCGCTCTCTGCGGACCATGAGCTACCGAGGCACCTTTCAAGAATTCTGCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR-3UTR CAA 90 bp TGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAGAGGCTGCACGTTCGACAGCTGCTTTCGGTaGGGAATCATCACACTCCCT +
Preference number: 3 (lower is better)
Translates to: WNCNVETVCNQTWRGCTFDSCFR*GIITLP
Trigger: AGGGAGTGTGATGATTCCCAACCGAAAGCAGCTGTC...GAACGTGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 72 bp TTTATCCTTACGGTCCAGGCCATTGGAACTGCAATGTaGAGACTGTTTGTAATCAGACATGGAGAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: FILTVQAIGTAM*RLFVIRHGEAA
Trigger: TGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAAGGATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR GCA 72 bp TACAGGCTTTATCCTTACGGTCCAGGCCATTGGAACTaGAATGTGGAGACTGTTTGTAATCAGACATGGAGA +
Preference number: 3 (lower is better)
Translates to: YRLYPYGPGHWN*NVETVCNQTWR
Trigger: TCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAAGGATAAAGCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR-3UTR CAA 90 bp AGAAATTTACTATTAAGCATCTGCTTGCCAGCATTAGTAGGCTATCACTTCAGGTTACGGTCCAGGCCATaGGAACTGCAATGTGGAGAC +
Preference number: 3 (lower is better)
Translates to: RNLLLSICLPALVGYHFRLRSRP*ELQCGD
Trigger: GTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAA...CCTGAAGTGATAGCCTACTAATGCTGGCAAGCAGATGCTTAATAGTAAATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR TCA 72 bp CACGCTGCTTCCAGAGTTTGTCCAGCAAGGAATAAATaGATGCATACAGGACTTTTGGCTAGTAGACTGTCT +
Preference number: 3 (lower is better)
Translates to: HAASRVCPARNK*MHTGLLASRLS
Trigger: AGACAGTCTACTAGCCAAAAGTCCTGTATGCATTCATTTATTCCTTGCTGGACAAACTCTGGAAGCAGCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR TCA 72 bp CTGAGATCTTTCTACCATTCGGGTGTGGCTCGCTCCTaGTTCCCCTTGGAAATGAACTTTTATTTGGTTTAC +
Preference number: 3 (lower is better)
Translates to: LRSFYHSGVARS*FPLEMNFYLVY
Trigger: GTAAACCAAATAAAAGTTCATTTCCAAGGGGAATCAGGAGCGAGCCACACCCGAATGGTAGAAAGATCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 72 bp GTCCAGCAAGGAATAAATGAATGCATACAGGACTTTTaGCTAGTAGACTGTCTGGGTATTGTGAGCATGCAG +
Preference number: 3 (lower is better)
Translates to: VQQGINECIQDF*LVDCLGIVSMQ
Trigger: CTGCATGCTCACAATACCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCATTCATTTATTCCTTGCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CCA 72 bp ATATATTACAGGCTTTATCCTTACGGTCCAGGCCATTaGAACTGCAATGTGGAGACTGTTTGTAATCAGACA +
Preference number: 3 (lower is better)
Translates to: IYYRLYPYGPGH*NCNVETVCNQT
Trigger: TGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAAGGATAAAGCCTGTAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CAGCCCAACTCTTCCCCGGCCCACGGGCAGGGCCTCAGCGTTGCAGCACTGGTCCTCCGCGGGCTCCTCTaGATTGGGCCTTTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: QPNSSPAHGQGLSVAALVLRGLL*IGPLEP
Trigger: CGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAG...GACCAGTGCTGCAACGCTGAGGCCCTGCCCGTGGGCCGGGGAAGAGTTGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR CAA 72 bp CCAACTCTTCCCCGGCCCACGGGCAGGGCCTCAGCGTaGCAGCACTGGTCCACCAGCTGGTGGCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PTLPRPTGRASA*QHWSTSWWQCS
Trigger: GGAGCACTGCCACCAGCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGCCCGTGGGCCGGGGAAGAGTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432404.5
CDS-3UTR TCA 90 bp CACGGGGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGTGGTCCTCCCACGGCTaGGCGCCTCAGGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: HGVGWLLAPDSPSLQRMWWSSHG*APQVHR
Trigger: TCTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCA...CCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACCCCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGCGGGCTCCTCTGCATTaGGCCTTTGGAGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: PSQKHRQGAAEPTMRCHVRAPLH*AFGAAR
Trigger: GCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCG...CACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CAGCCCAACTCTTCCCCGGCCCACGGGCAGGGCCTCAGCGTTGCAGCACTGGTCAACTCGGTCCTTTGGTaGCCGACTCTCCACCCACTG +
Preference number: 4 (lower is better)
Translates to: QPNSSPAHGQGLSVAALVNSVLW*PTLHPL
Trigger: CAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTT...GACCAGTGCTGCAACGCTGAGGCCCTGCCCGTGGGCCGGGGAAGAGTTGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432404.5
3UTR CAA 72 bp CAGCACATGCTCCGCGGGCTCCTCTGCATTGGGCCTTaGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: QHMLRGLLCIGP*EPPAGSLWQKD
Trigger: GTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAGCATGTGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp GGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGCGGACTTGGGGTAGGTaGCGATCCACACGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GLLCIGPLEPPAGSLWQKRTWGR*RSTRRW
Trigger: CCAGCGACGTGTGGATCGTCACCTACCCCAAGTCCG...CTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp CACGGGGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGCGGACTTGGGGTAGGTaGCGATCCACACGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: HGVGWLLAPDSPSLQRMWRTWGR*RSTRRW
Trigger: CCAGCGACGTGTGGATCGTCACCTACCCCAAGTCCG...CCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACCCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp ATGCTCCGCGGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCACTTCCCTCAGCACATaGTCCGCGGGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: MLRGLLCIGPLEPPAGSLTSLST*SAGSSA
Trigger: TGCAGAGGAGCCCGCGGAGCATGTGCTGAGGGAAGT...GAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CAGGGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCACAGATGCCACGTGCCACCTaGCTGGCCACGCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QGYTRKMVLPRLSASGAQMPRAT*LATLLP
Trigger: GGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCAT...CTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CAGGGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCACAGCTGCCGAGCCCACCATaGGATGCCACGTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: QGYTRKMVLPRLSASGAQLPSPP*DATCHL
Trigger: CAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAG...CTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGTGAGCGATCCACACGTCGCTaGGCCGCACCGGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: GWLATGPRLSIASANVGERSTRR*AAPGSW
Trigger: CCAACTTCCCGGTGCGGCCCAGCGACGTGTGGATCG...CTCACCCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp ATCATCACACTCCCTCCGCTCACGCCGCTCTTCCCTTCCCCCGCTGTTTCACACGTCCAGGCCCGGCTGTaGGTACTCCAGGACCGGGAG +
Preference number: 4 (lower is better)
Translates to: IITLPPLTPLFPSPAVSHVQARL*VLQDRE
Trigger: CTCCCGGTCCTGGAGTACCCACAGCCGGGCCTGGAC...GTGTGAAACAGCGGGGGAAGGGAAGAGCGGCGTGAGCGGAGGGAGTGTGATGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330884.9
ENST00000422525.1
CDS-3UTR CCA 90 bp AGCACATGCTCCGCGGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAATGCCTCGGTAGCTCATaGTCCGCAGAGAGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: STCSAGSSALGLWSRPLECLGSS*SAESGG
Trigger: TCCACCGCTCTCTGCGGACCATGAGCTACCGAGGCA...TTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAGCATGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGCCACCTACCAGCTGGTGGCAGTaGTCCGTCAGGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QKHRQGAAEPTMRCHVPPTSWWQ*SVRASS
Trigger: GCTGGAAGCCCTGACGGAGCACTGCCACCAGCTGGT...AGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp ATCATCACACTCCCTCCGCTCACGCCGCTCTTCCCTTCCCCCGCTGTTTCACACCCATGCGATGCCACGTaGCACCTGCCTGGCCACGCT +
Preference number: 4 (lower is better)
Translates to: IITLPPLTPLFPSPAVSHPCDAT*HLPGHA
Trigger: AGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGG...GTGTGAAACAGCGGGGGAAGGGAAGAGCGGCGTGAGCGGAGGGAGTGTGATGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp ATGCTCCGCGGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCGGCAGCCGCACGCCATaGAACTCGAAGTACTTGCTC +
Preference number: 4 (lower is better)
Translates to: MLRGLLCIGPLEPPAGSLGSRTP*NSKYLL
Trigger: GAGCAAGTACTTCGAGTTCCATGGCGTGCGGCTGCC...GAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp TCACAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACGTCCAGGCCCGGCTGTaGGTACTCCAGGACCGGGAG +
Preference number: 4 (lower is better)
Translates to: SQKAASLTETQARCCRAHVQARL*VLQDRE
Trigger: CTCCCGGTCCTGGAGTACCCACAGCCGGGCCTGGAC...GTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330884.9
ENST00000422525.1
CDS-3UTR CCA 90 bp GAGGTGGACAGACACGCAGGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTCTGCATTGGGCCTTTaGAGCCGCCCGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: EVDRHAGGRANLIRVKQGSALGL*SRPLEV
Trigger: GACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGA...GCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTGTCTGTCCACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CCACGGGGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGCGCAACTCGGTCCTTTaGTGGCCGACTCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: PRGWLATGPRLSIASANVRNSVL*WPTLHP
Trigger: TGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCG...CACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACCCCGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CGGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAACGCAACTCGGTCCTTTaGTGGCCGACTCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: RAPLHWAFGAARWKSLAERNSVL*WPTLHP
Trigger: TGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCG...TTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp AAGAACGGAGACCCCTTCCACAGCAGCGACCCTCCTGACCACCACTTTGGGTGCGGGTTGGCTGGCTACTaGCCCCCGACTCTCCATCGC +
Preference number: 4 (lower is better)
Translates to: KNGDPFHSSDPPDHHFGCGLAGY*PPTLHR
Trigger: GCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACCC...GCACCCAAAGTGGTGGTCAGGAGGGTCGCTGCTGTGGAAGGGGTCTCCGTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp AAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCCTCCGCGGGCTCCTCTaGATTGGGCCTTTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: KFRAQLGPLVADSPPTACLRGLL*IGPLEP
Trigger: CGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAG...GCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAATGGTCCTCCGCGGGCTCCTCTaGATTGGGCCTTTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: GGRANLIRVKQGYTRKMVLRGLL*IGPLEP
Trigger: CGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAG...GACCATTTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGGCAGCCGCACGCCATaGAACTCGAAGTACTTGCTC +
Preference number: 4 (lower is better)
Translates to: GLLCIGPLEPPAGSLWQKGSRTP*NSKYLL
Trigger: GAGCAAGTACTTCGAGTTCCATGGCGTGCGGCTGCC...CTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CTCCGCTCACGCCGCTCTTCCCTTCCCCCGCTGTTTCACACGCTGCTTCCAGAGGGCAGCCGCACGCCATaGAACTCGAAGTACTTGCTC +
Preference number: 4 (lower is better)
Translates to: LRSRRSSLPPLFHTLLPEGSRTP*NSKYLL
Trigger: GAGCAAGTACTTCGAGTTCCATGGCGTGCGGCTGCC...CTCTGGAAGCAGCGTGTGAAACAGCGGGGGAAGGGAAGAGCGGCGTGAGCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CCCACCATGCGATGCCACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTACAAGCCGCACCGGGAAGTTaGCGATCTCCTCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: PTMRCHVPPAWPRFSPLQAAPGS*RSPPSS
Trigger: GGAAGATGGAGGAGATCGCCAACTTCCCGGTGCGGC...TTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGTGAGGTCAGGGCTTCCAGCTaGGCCTTGTCACAGGACACC +
Preference number: 4 (lower is better)
Translates to: GWLATGPRLSIASANVGEVRASS*ALSQDT
Trigger: GGTGTCCTGTGACAAGGCCCAGCTGGAAGCCCTGAC...CTCACCCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp AAGAACGGAGACCCCTTCCACAGCAGCGACCCTCCTGACCACCACTTTGGGTGCTGGTCCACCAGCTGGTaGCAGTGCTCCGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KNGDPFHSSDPPDHHFGCWSTSW*QCSVRA
Trigger: AGCCCTGACGGAGCACTGCCACCAGCTGGTGGACCA...GCACCCAAAGTGGTGGTCAGGAGGGTCGCTGCTGTGGAAGGGGTCTCCGTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GCACCAAGAACGGAGACCCCTTCCACAGCAGCGACCCTCCTGACCACCACTTTGTGGTCCACCAGCTGGTaGCAGTGCTCCGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: APRTETPSTAATLLTTTLWSTSW*QCSVRA
Trigger: AGCCCTGACGGAGCACTGCCACCAGCTGGTGGACCA...CAAAGTGGTGGTCAGGAGGGTCGCTGCTGTGGAAGGGGTCTCCGTTCTTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GAAACAGGGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCCACTGGTCCACCAGCTaGTGGCAGTGCTCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: ETGLHSQNGPPTAERLRCHWSTS*WQCSVR
Trigger: CCTGACGGAGCACTGCCACCAGCTGGTGGACCAGTG...GCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCCCTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CCCACCATGCGATGCCACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTACAATCAGCGTTGCAGCACTaGTCCACCAGCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PTMRCHVPPAWPRFSPLQSALQH*STSWWQ
Trigger: CTGCCACCAGCTGGTGGACCAGTGCTGCAACGCTGA...TTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGATCTGCATTGGGCCTTTaGAGCCGCCCGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: APLHWAFGAARWKSLAEGSALGL*SRPLEV
Trigger: GACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGA...TCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGTGAGTCTGCATTGGGCCTTTaGAGCCGCCCGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: GWLATGPRLSIASANVGESALGL*SRPLEV
Trigger: GACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGA...CTCACCCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GGCTGTGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACCGGGCTCCTCTGCATTaGGCCTTTGGAGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: GCGIQLKFRAQLGPLVADRAPLH*AFGAAR
Trigger: GCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCG...GTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp AGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCACGGAGGGATGAGGTaGACAGACACGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: SSNSERNSVLWWPTLHPLHGGMR*TDTQAA
Trigger: GGCCGCCTGCGTGTCTGTCCACCTCATCCCTCCGTG...CAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp CACGGGGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGTTCCAGCCACATAAATaGCAGACAACCCCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: HGVGWLLAPDSPSLQRMWFQPHK*QTTPVP
Trigger: GGGGACCGGGGTTGTCTGTCATTTATGTGGCTGGAA...CCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACCCCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGCCACCTGGAACTCGAAGTACTTaGTCTCGAACTCCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QKHRQGAAEPTMRCHVPPGTRST*SRTPPG
Trigger: CCCCGGGGGAGTTCGAGAGCAAGTACTTCGAGTTCC...AGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGAGGAATCTGGCCAGCTaGTCCACCATCGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PSQKHRQGAAEPTMRCHVRNLAS*STIVTR
Trigger: CCTGGTGACGATGGTGGAGCAGCTGGCCAGATTCCT...CACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp AGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGACCAGCTGGTGGCAGTaGTCCGTCAGGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSNSERNSVLWWPTLHPLTSWWQ*SVRASS
Trigger: GCTGGAAGCCCTGACGGAGCACTGCCACCAGCTGGT...CAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CACGCAGGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAACACGCAGGCGGCCGTaGCAACCTGATCCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: HAGGRANLIRVKQGYTRKTRRRP*QPDPSE
Trigger: TTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTGT...TTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGTCCATTCTGAAGTCAGCGTTGCAGCACTaGTCCACCAGCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GLWSRPLEVSGRRTSILKSALQH*STSWWQ
Trigger: CTGCCACCAGCTGGTGGACCAGTGCTGCAACGCTGA...CTTCAGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGTGAGACACGTGCCACCTGCCTaGCCACGCTTCTCCCCATTA +
Preference number: 4 (lower is better)
Translates to: VGWLLAPDSPSLQRMWVRHVPPA*PRFSPL
Trigger: TAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTG...TCTCACCCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp GGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGTGAGGGTGTGGCTCGCTCCTaGTTCCCCTTGGAAATGAAC +
Preference number: 4 (lower is better)
Translates to: GWLATGPRLSIASANVGEGVARS*FPLEMN
Trigger: GTTCATTTCCAAGGGGAATCAGGAGCGAGCCACACC...CTCACCCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GCACCAAGAACGGAGACCCCTTCCACAGCAGCGACCCTCCTGACCACCACTTTGGGAACTCGAAGTACTTaGTCTCGAACTCCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: APRTETPSTAATLLTTTLGTRST*SRTPPG
Trigger: CCCCGGGGGAGTTCGAGAGCAAGTACTTCGAGTTCC...CAAAGTGGTGGTCAGGAGGGTCGCTGCTGTGGAAGGGGTCTCCGTTCTTGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGTTCCAGGACCGGGAGCTaGTCGTCGATGTTCATCAAG +
Preference number: 4 (lower is better)
Translates to: PLHWAFGAARWKSLAEGRSRTGS*SSMFIK
Trigger: CTTGATGAACATCGACGAGCAGCTCCCGGTCCTGGA...ACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330884.9
ENST00000422525.1
CDS-3UTR GCA 90 bp ATCATCACACTCCCTCCGCTCACGCCGCTCTTCCCTTCCCCCGCTGTTTCACACTTCGAGTCCATGCGGTaGTCCCAGAACTCCTGCACG +
Preference number: 4 (lower is better)
Translates to: IITLPPLTPLFPSPAVSHFESMR*SQNSCT
Trigger: CGTGCAGGAGTTCTGGGAGCACCGCATGGACTCGAA...GTGTGAAACAGCGGGGGAAGGGAAGAGCGGCGTGAGCGGAGGGAGTGTGATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCACAGAACAAACTGAATCCATGCGATGCCACGTaGCACCTGCCTGGCCACGCT +
Preference number: 4 (lower is better)
Translates to: RKMVLPRLSASGAQNKLNPCDAT*HLPGHA
Trigger: AGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGG...ATTCAGTTTGTTCTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCAAATGCTCCTGACACAGGCAAGGTGCTaGCGAGCCCACCATGCGATG +
Preference number: 4 (lower is better)
Translates to: ATRSFGGRLSTHCMQMLLTQARC*RAHHAM
Trigger: CATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGT...CAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp ATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCAAACACAGGCAAGGTGCTaGCGAGCCCACCATGCGATG +
Preference number: 4 (lower is better)
Translates to: IPSATRSFGGRLSTHCMQTQARC*RAHHAM
Trigger: CATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGT...TTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAATGGTCACACAGGCAAGGTGCTaGCGAGCCCACCATGCGATG +
Preference number: 4 (lower is better)
Translates to: GGRANLIRVKQGYTRKMVTQARC*RAHHAM
Trigger: CATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGT...GACCATTTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCCGCACCGGGAAGTTaGCGATCTCCTCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: QKAASLTETQARCCRAHHAAPGS*RSPPSS
Trigger: GGAAGATGGAGGAGATCGCCAACTTCCCGGTGCGGC...ATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp TGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCCGATCCACACGTCGCTaGGCCGCACCGGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: WNSAQIPSATRSFGGRLSRSTRR*AAPGSW
Trigger: CCAACTTCCCGGTGCGGCCCAGCGACGTGTGGATCG...GGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGTCCCGCTGGAAGTCTCTaGCAGAAGGACGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: PLHWAFGAARWKSLAEGRPAGSL*QKDVHS
Trigger: AGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGG...ACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp AACCCTGAGATCTTTCTACCATTCGGGTGTGGCTCGCTCCTGATTCCCCTTGGACGGGCTCCTCTGCATTaGGCCTTTGGAGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: NPEIFLPFGCGSLLIPLGRAPLH*AFGAAR
Trigger: GCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCG...TCCAAGGGGAATCAGGAGCGAGCCACACCCGAATGGTAGAAAGATCTCAGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CACGCAGGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAAACTCGGTCCTTTGGTaGCCGACTCTCCACCCACTG +
Preference number: 4 (lower is better)
Translates to: HAGGRANLIRVKQGYTRKNSVLW*PTLHPL
Trigger: CAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTT...TTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GCGGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGAATTCTTGAAAGGTaGCTCGGTAGCTCATGGTCC +
Preference number: 4 (lower is better)
Translates to: AGSSALGLWSRPLEVSGRRILER*LGSSWS
Trigger: GGACCATGAGCTACCGAGGCACCTTTCAAGAATTCT...TCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp ATCATCACACTCCCTCCGCTCACGCCGCTCTTCCCTTCCCCCGCTGTTTCACACTGCTCCCAGAACTCCTaGACGTGCTCAAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: IITLPPLTPLFPSPAVSHCSQNS*TCSNQE
Trigger: CTCCTGGTTTGAGCACGTGCAGGAGTTCTGGGAGCA...GTGTGAAACAGCGGGGGAAGGGAAGAGCGGCGTGAGCGGAGGGAGTGTGATGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp AAACAGGGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCAGCACGTTCGAGTCCATaGGGTGCTCCCAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: KQGYTRKMVLPRLSASGAARSSP*GAPRTP
Trigger: AGGAGTTCTGGGAGCACCGCATGGACTCGAACGTGC...TGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCCCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GGCTGTGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACACACGCAGGCGGCCGTaGCAACCTGATCCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: GCGIQLKFRAQLGPLVADTRRRP*QPDPSE
Trigger: TTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTGT...GTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGACACCACCAGATCCTTaGGGTTGCGAGCCATATAGA +
Preference number: 4 (lower is better)
Translates to: GLLCIGPLEPPAGSLWQKTPPDP*GCEPYR
Trigger: TCTATATGGCTCGCAACCCCAAGGATCTGGTGGTGT...CTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GCGATGCCACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTACAAACAAAAACACACCCCCAGGAATCTaGCCAGCTGCTCCACCATCG +
Preference number: 4 (lower is better)
Translates to: AMPRATCLATLLPITNKNTPPGI*PAAPPS
Trigger: CGATGGTGGAGCAGCTGGCCAGATTCCTGGGGGTGT...GTTTTTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GGCCGACTCTCCACCCACTGCATGCAAATGCTCCTGACTGCATTAGACTCCCACACACCCCCAGGAATCTaGCCAGCTGCTCCACCATCG +
Preference number: 4 (lower is better)
Translates to: GRLSTHCMQMLLTALDSHTPPGI*PAAPPS
Trigger: CGATGGTGGAGCAGCTGGCCAGATTCCTGGGGGTGT...GTGGGAGTCTAATGCAGTCAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp AAGAACGGAGACCCCTTCCACAGCAGCGACCCTCCTGACCACCACTTTGGGTGCTCTACCATTCGGGTGTaGCTCGCTCCTGATTCCCCT +
Preference number: 4 (lower is better)
Translates to: KNGDPFHSSDPPDHHFGCSTIRV*LAPDSP
Trigger: AGGGGAATCAGGAGCGAGCCACACCCGAATGGTAGA...GCACCCAAAGTGGTGGTCAGGAGGGTCGCTGCTGTGGAAGGGGTCTCCGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GCACCAAGAACGGAGACCCCTTCCACAGCAGCGACCCTCCTGACCACCACTTTGCCCGCTGGAAGTCTCTaGCAGAAGGACGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: APRTETPSTAATLLTTTLPAGSL*QKDVHS
Trigger: AGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGG...CAAAGTGGTGGTCAGGAGGGTCGCTGCTGTGGAAGGGGTCTCCGTTCTTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GGCCGACTCTCCACCCACTGCATGCAAATGCTCCTGACTGCATTAGACTCCCACCACGTGCCACCTGCCTaGCCACGCTTCTCCCCATTA +
Preference number: 4 (lower is better)
Translates to: GRLSTHCMQMLLTALDSHHVPPA*PRFSPL
Trigger: TAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTG...GTGGGAGTCTAATGCAGTCAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp TTTCGGTTGGGAATCATCACACTCCCTCCGCTCACGCCGCTCTTCCCTTCCCCCCATTCATGGAGACGGTaGAGATGTCCTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: FRLGIITLPPLTPLFPSPHSWRR*RCPSTA
Trigger: GGCTGTGGAAGGACATCTTCACCGTCTCCATGAATG...GGGGGAAGGGAAGAGCGGCGTGAGCGGAGGGAGTGTGATGATTCCCAACCGAAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp CACGGGGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGTATCTCAGAACCAAGTaGGAACAGAATGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: HGVGWLLAPDSPSLQRMWYLRTK*EQNGCA
Trigger: GGCACAGCCATTCTGTTCTCACTTGGTTCTGAGATA...CCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACCCCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp ATGCTCCGCGGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCATTTCAGGAAGGTTCTaGAGAAGTGAACTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: MLRGLLCIGPLEPPAGSLISGRF*RSELRQ
Trigger: CTGACGGAGTTCACTTCTTCAGAACCTTCCTGAAAT...GAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGCGGAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GGCTGTGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACAGGAATCTGGCCAGCTaGTCCACCATCGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: GCGIQLKFRAQLGPLVADRNLAS*STIVTR
Trigger: CCTGGTGACGATGGTGGAGCAGCTGGCCAGATTCCT...GTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GGCCGACTCTCCACCCACTGCATGCAAATGCTCCTGACTGCATTAGACTCCCACAGGAATCTGGCCAGCTaGTCCACCATCGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: GRLSTHCMQMLLTALDSHRNLAS*STIVTR
Trigger: CCTGGTGACGATGGTGGAGCAGCTGGCCAGATTCCT...GTGGGAGTCTAATGCAGTCAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CAGAGAGCGGTGGAACTGATAATAAGACACCACCAGATCCTTGGGGTTGCGAGCGCAGGGCCTCAGCGTTaGAGCACTGGTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: QRAVELIIRHHQILGVASAGPQR*STGPPA
Trigger: AGCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGC...GCTCGCAACCCCAAGGATCTGGTGGTGTCTTATTATCAGTTCCACCGCTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432404.5
CDS-3UTR GCA 90 bp AAATTTCACAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGATGCCACGTGCCACCTaGCTGGCCACGCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: KFHRKQPPSQKHRQGAAEMPRAT*LATLLP
Trigger: GGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCAT...CTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTGTGAAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCAGGAGCCCACCATGCGATaGCACGTGCCACCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLHPFQIQHQERRPLPQQEPTMR*HVPPAW
Trigger: CCAGGCAGGTGGCACGTGGCATCGCATGGTGGGCTC...CTGCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp AAGAACGGAGACCCCTTCCACAGCAGCGACCCTCCTGACCACCACTTTGGGTGCCTGGCTACTCGGCCCTaGATTCTCACCAACTCAAGA +
Preference number: 4 (lower is better)
Translates to: KNGDPFHSSDPPDHHFGCLATRP*ILTNSR
Trigger: TCTTGAGTTGGTGAGAATGCAGGGCCGAGTAGCCAG...GCACCCAAAGTGGTGGTCAGGAGGGTCGCTGCTGTGGAAGGGGTCTCCGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422525.1
CDS-3UTR CCA 90 bp GCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGATTGGAGTCTCCATTGTaGAGGTCAGAGGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: APLHWAFGAARWKSLAEGLESPL*RSEGRK
Trigger: CTTTCTGCCCTCTGACCTCCACAATGGAGACTCCAA...TCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGCCACCTACACCACCAGATCCTTaGGGTTGCGAGCCATATAGA +
Preference number: 4 (lower is better)
Translates to: QKHRQGAAEPTMRCHVPPTPPDP*GCEPYR
Trigger: TCTATATGGCTCGCAACCCCAAGGATCTGGTGGTGT...AGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACGTCAGGGCTTCCAGCTaGGCCTTGTCACAGGACACC +
Preference number: 4 (lower is better)
Translates to: EFSSNSERNSVLWWPTLHVRASS*ALSQDT
Trigger: GGTGTCCTGTGACAAGGCCCAGCTGGAAGCCCTGAC...GTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp AGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGTCTACCATTCGGGTGTaGCTCGCTCCTGATTCCCCT +
Preference number: 4 (lower is better)
Translates to: SSNSERNSVLWWPTLHPLSTIRV*LAPDSP
Trigger: AGGGGAATCAGGAGCGAGCCACACCCGAATGGTAGA...CAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CAGCCCAACTCTTCCCCGGCCCACGGGCAGGGCCTCAGCGTTGCAGCACTGGTCAACAAAGTAAGGCTGTaGAATTCAGCTCAAATTCCG +
Preference number: 4 (lower is better)
Translates to: QPNSSPAHGQGLSVAALVNKVRL*NSAQIP
Trigger: CGGAATTTGAGCTGAATTCCACAGCCTTACTTTGTT...GACCAGTGCTGCAACGCTGAGGCCCTGCCCGTGGGCCGGGGAAGAGTTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432404.5
CDS-3UTR TCA 90 bp CCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGTGTGCACAGAACAAACTaGATGATAAAGACCCGGGGA +
Preference number: 4 (lower is better)
Translates to: PLHWAFGAARWKSLAEGRVHRTN*MIKTRG
Trigger: TCCCCGGGTCTTTATCATTCAGTTTGTTCTGTGCAC...ACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp AAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCGCAAATGCTCCTGACTaGATTAGACTCCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: KFRAQLGPLVADSPPTACANAPD*IRLPPA
Trigger: GGCAGGTGGGAGTCTAATGCAGTCAGGAGCATTTGC...GCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp TCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCCCTCCTGCAGCAAGCTaGTGCCGGACTTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SLYTRFKYSTKNGDPFHSPPAAS*CRTWGR
Trigger: CCTACCCCAAGTCCGGCACCAGCTTGCTGCAGGAGG...GCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330884.9
ENST00000422525.1
CDS-3UTR CCA 90 bp GAGAGGCTGCACGTTCTAAAGGCGAGACAGCTGCTTTCGGTTGGGAATCATCACTGCCTCGGTAGCTCATaGTCCGCAGAGAGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: ERLHVLKARQLLSVGNHHCLGSS*SAESGG
Trigger: TCCACCGCTCTCTGCGGACCATGAGCTACCGAGGCA...GTGATGATTCCCAACCGAAAGCAGCTGTCTCGCCTTTAGAACGTGCAGCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CCACGGGGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGTGCATACAGGACTTTTaGCTAGTAGACTGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PRGWLATGPRLSIASANVCIQDF*LVDCLG
Trigger: ACCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCA...CACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACCCCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GCAATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGGGATGAGGTGGACAGGGTTGGCTGGCTACTaGCCCCCGACTCTCCATCGC +
Preference number: 4 (lower is better)
Translates to: AIKTSPLLPQIHGGMRWTGLAGY*PPTLHR
Trigger: GCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACCC...TGTCCACCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp GGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGTCCATTCTGAAGGTGCACAGAACAAACTaGATGATAAAGACCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GLWSRPLEVSGRRTSILKVHRTN*MIKTRG
Trigger: TCCCCGGGTCTTTATCATTCAGTTTGTTCTGTGCAC...CTTCAGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp GTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGTGAGAGTGCACAGAACAAACTaGATGATAAAGACCCGGGGA +
Preference number: 4 (lower is better)
Translates to: VGWLLAPDSPSLQRMWVRVHRTN*MIKTRG
Trigger: TCCCCGGGTCTTTATCATTCAGTTTGTTCTGTGCAC...TCTCACCCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp TGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAGAGGCTGCACGTTCTGGTCCTCCCACGGCTaGGCGCCTCAGGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: WNCNVETVCNQTWRGCTFWSSHG*APQVHR
Trigger: TCTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCA...GAACGTGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CACGCAGGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAACCAGGCCATTGGAACTaGAATGTGGAGACTGTTTGT +
Preference number: 4 (lower is better)
Translates to: HAGGRANLIRVKQGYTRKPGHWN*NVETVC
Trigger: ACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGG...TTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCACTTCCCTCAGCACATaGTCCGCGGGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SLYTRFKYSTKNGDPFHSTSLST*SAGSSA
Trigger: TGCAGAGGAGCCCGCGGAGCATGTGCTGAGGGAAGT...GCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAGAGGCTGCACGTTCTCCATGCGATGCCACGTaGCACCTGCCTGGCCACGCT +
Preference number: 4 (lower is better)
Translates to: GTAMWRLFVIRHGEAARSPCDAT*HLPGHA
Trigger: AGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGG...AGAACGTGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GCTGGAAGTCTCTGGCAGAAGGACGTCCATTCTGAAGACCTAGTGAACAATTTCGAGCCCACCATGCGATaGCACGTGCCACCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AGSLWQKDVHSEDLVNNFEPTMR*HVPPAW
Trigger: CCAGGCAGGTGGCACGTGGCATCGCATGGTGGGCTC...GAAATTGTTCACTAGGTCTTCAGAATGGACGTCCTTCTGCCAGAGACTTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAGAGGCTGCACGTTCGAGCCCACCATGCGATaGCACGTGCCACCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: WNCNVETVCNQTWRGCTFEPTMR*HVPPAW
Trigger: CCAGGCAGGTGGCACGTGGCATCGCATGGTGGGCTC...GAACGTGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GTCAAACTTCTCATTCATGGAGACGGTGAAGATGTCCTTCCACAGCCCAACTCTCGATCCACACGTCGCTaGGCCGCACCGGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: VKLLIHGDGEDVLPQPNSRSTRR*AAPGSW
Trigger: CCAACTTCCCGGTGCGGCCCAGCGACGTGTGGATCG...AGAGTTGGGCTGTGGAAGGACATCTTCACCGTCTCCATGAATGAGAAGTTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GCAATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGGGATGAGGTGGACACACTGGTCCACCAGCTaGTGGCAGTGCTCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: AIKTSPLLPQIHGGMRWTHWSTS*WQCSVR
Trigger: CCTGACGGAGCACTGCCACCAGCTGGTGGACCAGTG...TGTCCACCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp ACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTACAAACAAAAACACAAGCTTTCAGCGTTGCAGCACTaGTCCACCAGCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TCHLPGHASPHYKQKHKLSALQH*STSWWQ
Trigger: CTGCCACCAGCTGGTGGACCAGTGCTGCAACGCTGA...AAGCTTGTGTTTTTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCAAATGCTCCTGTACGGTCCAGGCCATTaGAACTGCAATGTGGAGACT +
Preference number: 4 (lower is better)
Translates to: ATRSFGGRLSTHCMQMLLYGPGH*NCNVET
Trigger: AGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTA...CAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CAA 72 bp GGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTaGGTGGCCGACTCTCCACCCACTGCATGCAAATGC +
Preference number: 4 (lower is better)
Translates to: GIQLKFRAQLGP*VADSPPTACKC
Trigger: GCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp GAAACAGGGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCATTTCAGGAAGGTTCTaGAGAAGTGAACTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: ETGLHSQNGPPTAERLRCISGRF*RSELRQ
Trigger: CTGACGGAGTTCACTTCTTCAGAACCTTCCTGAAAT...GCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCCCTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCAGTTCGAGTCCATGCGGTaGTCCCAGAACTCCTGCACG +
Preference number: 4 (lower is better)
Translates to: SLHPFQIQHQERRPLPQQFESMR*SQNSCT
Trigger: CGTGCAGGAGTTCTGGGAGCACCGCATGGACTCGAA...CTGCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGTCACCAGGTCCCGATaGATGTCTTCATACTTGAGA +
Preference number: 4 (lower is better)
Translates to: QKAASLTETQARCCRAHHVTRSR*MSSYLR
Trigger: TCTCAAGTATGAAGACATGCATCGGGACCTGGTGAC...ATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CCATGCGATGCCACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTACAAACAAGTCACCAGGTCCCGATaGATGTCTTCATACTTGAGA +
Preference number: 4 (lower is better)
Translates to: PCDATCHLPGHASPHYKQVTRSR*MSSYLR
Trigger: TCTCAAGTATGAAGACATGCATCGGGACCTGGTGAC...TTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GCTGGAAGTCTCTGGCAGAAGGACGTCCATTCTGAAGACCTAGTGAACAATTTCACCAGCTGGTGGCAGTaGTCCGTCAGGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AGSLWQKDVHSEDLVNNFTSWWQ*SVRASS
Trigger: GCTGGAAGCCCTGACGGAGCACTGCCACCAGCTGGT...GAAATTGTTCACTAGGTCTTCAGAATGGACGTCCTTCTGCCAGAGACTTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TACGGTCCAGGCCATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGGCAGGGCCTCAGCGTTaGAGCACTGGTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: YGPGHWNCNVETVCNQTWAGPQR*STGPPA
Trigger: AGCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGC...CCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCCGCTGTTTCACACGCTaGTTCCAGAGTTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: WNSAQIPSATRSFGGRLSRCFTR*FQSLSS
Trigger: GCTGGACAAACTCTGGAAGCAGCGTGTGAAACAGCG...GGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TGCATACAGGACTTTTGGCTAGTAGACTGTCTGGGTATTGTGAGCATGCAGGTTCTGCCGAGCCCACCATaGGATGCCACGTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: CIQDFWLVDCLGIVSMQVLPSPP*DATCHL
Trigger: CAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAG...AACCTGCATGCTCACAATACCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAATGGTCCTACACCACCAGATCCTTaGGGTTGCGAGCCATATAGA +
Preference number: 4 (lower is better)
Translates to: RPCQPDPSETGLHSQNGPTPPDP*GCEPYR
Trigger: TCTATATGGCTCGCAACCCCAAGGATCTGGTGGTGT...AGGACCATTTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCAGCGACCCGCTGGAAGTCTCTaGCAGAAGGACGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: LHPFQIQHQERRPLPQQRPAGSL*QKDVHS
Trigger: AGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGG...TCGCTGCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp AGAGTTAACCCTGAGATCTTTCTACCATTCGGGTGTGGCTCGCTCCTGATTCCCTTTGGAGCCGCCCGCTaGAAGTCTCTGGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: RVNPEIFLPFGCGSLLIPFGAAR*KSLAEG
Trigger: TCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAA...GGGAATCAGGAGCGAGCCACACCCGAATGGTAGAAAGATCTCAGGGTTAACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCACAGAACAAACTGAATTCTAAGCAATGCAGCTaGCTACTCGGCCCTGCATTC +
Preference number: 4 (lower is better)
Translates to: RKMVLPRLSASGAQNKLNSKQCS*LLGPAF
Trigger: GAATGCAGGGCCGAGTAGCCAGCTGCATTGCTTAGA...ATTCAGTTTGTTCTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422525.1
CDS-3UTR TCA 90 bp CCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGTAATAAAAGTCAAACGTaGGGTCACACTTTCCCATCT +
Preference number: 4 (lower is better)
Translates to: PLHWAFGAARWKSLAEGRNKSQT*GHTFPS
Trigger: AGATGGGAAAGTGTGACCTCACGTTTGACTTTTATT...ACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp GCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCAAATGCTCCTGACTGTCTGGGTATTGTaGGCATGCAGGTTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: ATRSFGGRLSTHCMQMLLTVWVL*ACRLLF
Trigger: AAACAACAACCTGCATGCTCACAATACCCAGACAGT...CAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp TCACAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACATTTCAGGAAGGTTCTaGAGAAGTGAACTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: SQKAASLTETQARCCRAHISGRF*RSELRQ
Trigger: CTGACGGAGTTCACTTCTTCAGAACCTTCCTGAAAT...GTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGTGAGAAAATTACGCTGTTTCACACGCTaGTTCCAGAGTTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: WLLAPDSPSLQRMWVRKLRCFTR*FQSLSS
Trigger: GCTGGACAAACTCTGGAAGCAGCGTGTGAAACAGCG...TAATTTTCTCACCCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GAGAGGCTGCACGTTCTAAAGGCGAGACAGCTGCTTTCGGTTGGGAATCATCACGCAAATGCTCCTGACTaGATTAGACTCCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: ERLHVLKARQLLSVGNHHANAPD*IRLPPA
Trigger: GGCAGGTGGGAGTCTAATGCAGTCAGGAGCATTTGC...GTGATGATTCCCAACCGAAAGCAGCTGTCTCGCCTTTAGAACGTGCAGCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CAAAAACACAAGCTTCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGCTGCCGAGCCCACCATaGGATGCCACGTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: QKHKLLSTPVSNTAPRTELPSPP*DATCHL
Trigger: CAGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAG...CTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGAAGCTTGTGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp AGTGAAGCAATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGGGATGAGGGAAACACAGGCAAGGTaGTGCCGAGCCCACCATGCG +
Preference number: 4 (lower is better)
Translates to: SEAIKTSPLLPQIHGGMRETQAR*CRAHHA
Trigger: CGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTC...CCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTATTGCTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CCTTACGGTCCAGGCCATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACAGAAACACAGGCAAGGTaGTGCCGAGCCCACCATGCG +
Preference number: 4 (lower is better)
Translates to: PYGPGHWNCNVETVCNQTETQAR*CRAHHA
Trigger: CGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTC...TGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp AAGTCAAACTTCTCATTCATGGAGACGGTGAAGATGTCCTTCCACAGCCCAACTTGGTCCACCAGCTGGTaGCAGTGCTCCGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KSNFSFMETVKMSFHSPTWSTSW*QCSVRA
Trigger: AGCCCTGACGGAGCACTGCCACCAGCTGGTGGACCA...AGTTGGGCTGTGGAAGGACATCTTCACCGTCTCCATGAATGAGAAGTTTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp ATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCAATGCATACAGGACTTTTaGCTAGTAGACTGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: IPSATRSFGGRLSTHCMQCIQDF*LVDCLG
Trigger: ACCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCA...TTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCACAGAACAAACTGAATACAGCTGCTTTCGGTTaGGAATCATCACACTCCCTC +
Preference number: 4 (lower is better)
Translates to: RKMVLPRLSASGAQNKLNTAAFG*ESSHSL
Trigger: GAGGGAGTGTGATGATTCCCAACCGAAAGCAGCTGT...ATTCAGTTTGTTCTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp TCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCTCTACCATTCGGGTGTaGCTCGCTCCTGATTCCCCT +
Preference number: 4 (lower is better)
Translates to: SLYTRFKYSTKNGDPFHSSTIRV*LAPDSP
Trigger: AGGGGAATCAGGAGCGAGCCACACCCGAATGGTAGA...GCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CAGGCTTTATCCTTACGGTCCAGGCCATTGGAACTGCAATGTGGAGACTGTTTGAACTCGGTCCTTTGGTaGCCGACTCTCCACCCACTG +
Preference number: 4 (lower is better)
Translates to: QALSLRSRPLELQCGDCLNSVLW*PTLHPL
Trigger: CAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTT...CAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAAGGATAAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CAAAAACACAAGCTTCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGCACGGAGGGATGAGGTaGACAGACACGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: QKHKLLSTPVSNTAPRTEHGGMR*TDTQAA
Trigger: GGCCGCCTGCGTGTCTGTCCACCTCATCCCTCCGTG...CTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGAAGCTTGTGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CAAAAACACAAGCTTCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGGGGTTGGCTGGCTACTaGCCCCCGACTCTCCATCGC +
Preference number: 4 (lower is better)
Translates to: QKHKLLSTPVSNTAPRTEGLAGY*PPTLHR
Trigger: GCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACCC...CTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGAAGCTTGTGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
3UTR CAA 72 bp ACCATCGTCACCAGGTCCCGATGCATGTCTTCATACTaGAGAAAAAGCACGTTCGAGTCCATGCGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TIVTRSRCMSSY*RKSTFESMRCS
Trigger: GGAGCACCGCATGGACTCGAACGTGCTTTTTCTCAAGTATGAAGACATGCATCGGGACCTGGTGACGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432404.5
CDS-3UTR TCA 90 bp CAAAAACACAAGCTTCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGCGGACTTGGGGTAGGTaGCGATCCACACGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: QKHKLLSTPVSNTAPRTERTWGR*RSTRRW
Trigger: CCAGCGACGTGTGGATCGTCACCTACCCCAAGTCCG...CTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGAAGCTTGTGTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp CAAGCAAGCACAGAAGGATCATGTGTAGTGCTCAGTAACATCCATACAGTACTATGGTCCTCCCACGGCTaGGCGCCTCAGGTGCACAGA +
Preference number: 4 (lower is better)
Translates to: QASTEGSCVVLSNIHTVLWSSHG*APQVHR
Trigger: TCTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCA...TAGTACTGTATGGATGTTACTGAGCACTACACATGATCCTTCTGTGCTTGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CAAGTCAAACTTCTCATTCATGGAGACGGTGAAGATGTCCTTCCACAGCCCAACGCACGTTCGAGTCCATaGGGTGCTCCCAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: QVKLLIHGDGEDVLPQPNARSSP*GAPRTP
Trigger: AGGAGTTCTGGGAGCACCGCATGGACTCGAACGTGC...GTTGGGCTGTGGAAGGACATCTTCACCGTCTCCATGAATGAGAAGTTTGACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CAAAAACACAAGCTTCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGGCAGGGCCTCAGCGTTaGAGCACTGGTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: QKHKLLSTPVSNTAPRTEAGPQR*STGPPA
Trigger: AGCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGC...CTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGAAGCTTGTGTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp ATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAGAGGCTGCACGTACTTCCCTCAGCACATaGTCCGCGGGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: IGTAMWRLFVIRHGEAARTSLST*SAGSSA
Trigger: TGCAGAGGAGCCCGCGGAGCATGTGCTGAGGGAAGT...ACGTGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TGCATACAGGACTTTTGGCTAGTAGACTGTCTGGGTATTGTGAGCATGCAGGTTACACGCAGGCGGCCGTaGCAACCTGATCCGAGTGAA +
Preference number: 4 (lower is better)
Translates to: CIQDFWLVDCLGIVSMQVTRRRP*QPDPSE
Trigger: TTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTGT...AACCTGCATGCTCACAATACCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GTCCAGCAAGGAATAAATGAATGCATACAGGACTTTTGGCTAGTAGACTGTCTGATGCCACGTGCCACCTaGCTGGCCACGCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: VQQGINECIQDFWLVDCLMPRAT*LATLLP
Trigger: GGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCAT...CAGACAGTCTACTAGCCAAAAGTCCTGTATGCATTCATTTATTCCTTGCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CTTTTGGCTAGTAGACTGTCTGGGTATTGTGAGCATGCAGGTTGTTGTTTCTGTCCTCCTGCAGCAAGCTaGTGCCGGACTTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: LLASRLSGYCEHAGCCFCPPAAS*CRTWGR
Trigger: CCTACCCCAAGTCCGGCACCAGCTTGCTGCAGGAGG...ACAGAAACAACAACCTGCATGCTCACAATACCCAGACAGTCTACTAGCCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330884.9
ENST00000422525.1
CDS-3UTR CCA 90 bp AAGTCAAACTTCTCATTCATGGAGACGGTGAAGATGTCCTTCCACAGCCCAACTTGCCTCGGTAGCTCATaGTCCGCAGAGAGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: KSNFSFMETVKMSFHSPTCLGSS*SAESGG
Trigger: TCCACCGCTCTCTGCGGACCATGAGCTACCGAGGCA...AGTTGGGCTGTGGAAGGACATCTTCACCGTCTCCATGAATGAGAAGTTTGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp ATGCATACAGGACTTTTGGCTAGTAGACTGTCTGGGTATTGTGAGCATGCAGGTGTCAGGGCTTCCAGCTaGGCCTTGTCACAGGACACC +
Preference number: 4 (lower is better)
Translates to: MHTGLLASRLSGYCEHAGVRASS*ALSQDT
Trigger: GGTGTCCTGTGACAAGGCCCAGCTGGAAGCCCTGAC...ACCTGCATGCTCACAATACCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp GAGAGGCTGCACGTTCTAAAGGCGAGACAGCTGCTTTCGGTTGGGAATCATCACTGCGAGCCATATAGATaGCCTTGGAGTCTCCATTGT +
Preference number: 4 (lower is better)
Translates to: ERLHVLKARQLLSVGNHHCEPYR*PWSLHC
Trigger: ACAATGGAGACTCCAAGGTCATCTATATGGCTCGCA...GTGATGATTCCCAACCGAAAGCAGCTGTCTCGCCTTTAGAACGTGCAGCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp GCAATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGGGATGAGGTGGACACATTCATGGAGACGGTaGAGATGTCCTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: AIKTSPLLPQIHGGMRWTHSWRR*RCPSTA
Trigger: GGCTGTGGAAGGACATCTTCACCGTCTCCATGAATG...TGTCCACCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp GAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGTCCATTCTGAAGACCTAGTGAATAAAAGTCAAACGTaGGGTCACACTTTCCCATCT +
Preference number: 4 (lower is better)
Translates to: EPPAGSLWQKDVHSEDLVNKSQT*GHTFPS
Trigger: AGATGGGAAAGTGTGACCTCACGTTTGACTTTTATT...CACTAGGTCTTCAGAATGGACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp TGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAGAGGCTGCACGTTCGGTGTGGCTCGCTCCTaGTTCCCCTTGGAAATGAAC +
Preference number: 4 (lower is better)
Translates to: WNCNVETVCNQTWRGCTFGVARS*FPLEMN
Trigger: GTTCATTTCCAAGGGGAATCAGGAGCGAGCCACACC...GAACGTGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp CAAGTCAAACTTCTCATTCATGGAGACGGTGAAGATGTCCTTCCACAGCCCAACGGTGTGGCTCGCTCCTaGTTCCCCTTGGAAATGAAC +
Preference number: 4 (lower is better)
Translates to: QVKLLIHGDGEDVLPQPNGVARS*FPLEMN
Trigger: GTTCATTTCCAAGGGGAATCAGGAGCGAGCCACACC...GTTGGGCTGTGGAAGGACATCTTCACCGTCTCCATGAATGAGAAGTTTGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp AACCCTGAGATCTTTCTACCATTCGGGTGTGGCTCGCTCCTGATTCCCCTTGGATATCTCAGAACCAAGTaGGAACAGAATGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: NPEIFLPFGCGSLLIPLGYLRTK*EQNGCA
Trigger: GGCACAGCCATTCTGTTCTCACTTGGTTCTGAGATA...TCCAAGGGGAATCAGGAGCGAGCCACACCCGAATGGTAGAAAGATCTCAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp ATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAGAGGCTGCACGTAGATACACGGAGGGATaGGGTGGACAGACACGCAGG +
Preference number: 4 (lower is better)
Translates to: IGTAMWRLFVIRHGEAARRYTEG*GGQTRR
Trigger: CCTGCGTGTCTGTCCACCTCATCCCTCCGTGTATCT...ACGTGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp TCAAACTTCTCATTCATGGAGACGGTGAAGATGTCCTTCCACAGCCCAACTCTTAGATACACGGAGGGATaGGGTGGACAGACACGCAGG +
Preference number: 4 (lower is better)
Translates to: SNFSFMETVKMSFHSPTLRYTEG*GGQTRR
Trigger: CCTGCGTGTCTGTCCACCTCATCCCTCCGTGTATCT...AAGAGTTGGGCTGTGGAAGGACATCTTCACCGTCTCCATGAATGAGAAGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp ACGGTCCAGGCCATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGATTCCAGCCACATAAATaGCAGACAACCCCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: TVQAIGTAMWRLFVIRHGFQPHK*QTTPVP
Trigger: GGGGACCGGGGTTGTCTGTCATTTATGTGGCTGGAA...TCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp AGTGAAGCAATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGGGATGAGGTCCAGGACCGGGAGCTaGTCGTCGATGTTCATCAAG +
Preference number: 4 (lower is better)
Translates to: SEAIKTSPLLPQIHGGMRSRTGS*SSMFIK
Trigger: CTTGATGAACATCGACGAGCAGCTCCCGGTCCTGGA...CCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTATTGCTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330884.9
ENST00000422525.1
CDS-3UTR GCA 90 bp TACGGTCCAGGCCATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGTGCTCCCAGAACTCCTaGACGTGCTCAAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: YGPGHWNCNVETVCNQTWCSQNS*TCSNQE
Trigger: CTCCTGGTTTGAGCACGTGCAGGAGTTCTGGGAGCA...CCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TCAAACTTCTCATTCATGGAGACGGTGAAGATGTCCTTCCACAGCCCAACTCTTGCACGTTCGAGTCCATaGGGTGCTCCCAGAACTCCT +
Preference number: 4 (lower is better)
Translates to: SNFSFMETVKMSFHSPTLARSSP*GAPRTP
Trigger: AGGAGTTCTGGGAGCACCGCATGGACTCGAACGTGC...AAGAGTTGGGCTGTGGAAGGACATCTTCACCGTCTCCATGAATGAGAAGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCAGCGAGTCACCAGGTCCCGATaGATGTCTTCATACTTGAGA +
Preference number: 4 (lower is better)
Translates to: LHPFQIQHQERRPLPQQRVTRSR*MSSYLR
Trigger: TCTCAAGTATGAAGACATGCATCGGGACCTGGTGAC...TCGCTGCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGCCACCTCAAGGAATAAATGAATaGATACAGGACTTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: QKHRQGAAEPTMRCHVPPQGINE*IQDFWL
Trigger: TAGCCAAAAGTCCTGTATGCATTCATTTATTCCTTG...AGGTGGCACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GCAATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGGGATGAGGTGGACAGCAAATGCTCCTGACTaGATTAGACTCCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: AIKTSPLLPQIHGGMRWTANAPD*IRLPPA
Trigger: GGCAGGTGGGAGTCTAATGCAGTCAGGAGCATTTGC...TGTCCACCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCAAATGCTCCTGACTGCTTACTATTAAGCATCTaGTTGCCAGCATTAGTAGGC +
Preference number: 4 (lower is better)
Translates to: SVLWWPTLHPLHANAPDCLLLSI*LPALVG
Trigger: GCCTACTAATGCTGGCAAGCAGATGCTTAATAGTAA...GCAGTCAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp AGAGTTAACCCTGAGATCTTTCTACCATTCGGGTGTGGCTCGCTCCTGATTCCCTTGGAGTCTCCATTGTaGAGGTCAGAGGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RVNPEIFLPFGCGSLLIPLESPL*RSEGRK
Trigger: CTTTCTGCCCTCTGACCTCCACAATGGAGACTCCAA...GGGAATCAGGAGCGAGCCACACCCGAATGGTAGAAAGATCTCAGGGTTAACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CACGCAGGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAATTGGAACTGCAATGTaGAGACTGTTTGTAATCAGA +
Preference number: 4 (lower is better)
Translates to: HAGGRANLIRVKQGYTRKIGTAM*RLFVIR
Trigger: TCTGATTACAAACAGTCTCCACATTGCAGTTCCAAT...TTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp TCACAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACAACAAAGTAAGGCTGTaGAATTCAGCTCAAATTCCG +
Preference number: 4 (lower is better)
Translates to: SQKAASLTETQARCCRAHNKVRL*NSAQIP
Trigger: CGGAATTTGAGCTGAATTCCACAGCCTTACTTTGTT...GTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp TTTGTAATCAGACATGGAGAGGCTGCACGTTCTAAAGGCGAGACAGCTGCTTTCCATTCATGGAGACGGTaGAGATGTCCTTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: FVIRHGEAARSKGETAAFHSWRR*RCPSTA
Trigger: GGCTGTGGAAGGACATCTTCACCGTCTCCATGAATG...GAAAGCAGCTGTCTCGCCTTTAGAACGTGCAGCCTCTCCATGTCTGATTACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CAAAAACACAAGCTTCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGTTTGGAGCCGCCCGCTaGAAGTCTCTGGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: QKHKLLSTPVSNTAPRTEFGAAR*KSLAEG
Trigger: TCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAA...CTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGAAGCTTGTGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp GCAGACATTCTAGTTGCATATATTACAGGCTTTATCCTTACGGTCCAGGCCATTCACGTGCCACCTGCCTaGCCACGCTTCTCCCCATTA +
Preference number: 4 (lower is better)
Translates to: ADILVAYITGFILTVQAIHVPPA*PRFSPL
Trigger: TAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTG...AATGGCCTGGACCGTAAGGATAAAGCCTGTAATATATGCAACTAGAATGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CACGCAGGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAATCCTGGTTTAGGATTTaGAATCAAGACAATTTATGC +
Preference number: 4 (lower is better)
Translates to: HAGGRANLIRVKQGYTRKSWFRI*NQDNLC
Trigger: GCATAAATTGTCTTGATTCCAAATCCTAAACCAGGA...TTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422525.1
CDS-3UTR TCA 90 bp GAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACACAATAATACGGGGTTaGAAAGGCAGACATTCTAGT +
Preference number: 4 (lower is better)
Translates to: EFSSNSERNSVLWWPTLHTIIRG*KGRHSS
Trigger: ACTAGAATGTCTGCCTTTTCAACCCCGTATTATTGT...GTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CAAGCAAGCACAGAAGGATCATGTGTAGTGCTCAGTAACATCCATACAGTACTAGGAACTCGAAGTACTTaGTCTCGAACTCCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QASTEGSCVVLSNIHTVLGTRST*SRTPPG
Trigger: CCCCGGGGGAGTTCGAGAGCAAGTACTTCGAGTTCC...TAGTACTGTATGGATGTTACTGAGCACTACACATGATCCTTCTGTGCTTGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp AAGTCAAACTTCTCATTCATGGAGACGGTGAAGATGTCCTTCCACAGCCCAACTCGCTGTTTCACACGCTaGTTCCAGAGTTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KSNFSFMETVKMSFHSPTRCFTR*FQSLSS
Trigger: GCTGGACAAACTCTGGAAGCAGCGTGTGAAACAGCG...AGTTGGGCTGTGGAAGGACATCTTCACCGTCTCCATGAATGAGAAGTTTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp AAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCGGCAGACATTCTAGTTaGATATATTACAGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: KFRAQLGPLVADSPPTACGRHSS*IYYRLY
Trigger: ATAAAGCCTGTAATATATGCAACTAGAATGTCTGCC...GCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CCTTACGGTCCAGGCCATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATTGGAGTCTCCATTGTaGAGGTCAGAGGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PYGPGHWNCNVETVCNQTLESPL*RSEGRK
Trigger: CTTTCTGCCCTCTGACCTCCACAATGGAGACTCCAA...TGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp AGTGAAGCAATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGGGATGAGGTACGGTCCAGGCCATTaGAACTGCAATGTGGAGACT +
Preference number: 4 (lower is better)
Translates to: SEAIKTSPLLPQIHGGMRYGPGH*NCNVET
Trigger: AGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTA...CCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTATTGCTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp TACGGTCCAGGCCATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGTGCGAGCCATATAGATaGCCTTGGAGTCTCCATTGT +
Preference number: 4 (lower is better)
Translates to: YGPGHWNCNVETVCNQTWCEPYR*PWSLHC
Trigger: ACAATGGAGACTCCAAGGTCATCTATATGGCTCGCA...CCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp TCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCGCATGTCTTCATACTTaGGAAAAAGCACGTTCGAGT +
Preference number: 4 (lower is better)
Translates to: SLYTRFKYSTKNGDPFHSACLHT*EKARSS
Trigger: ACTCGAACGTGCTTTTTCTCAAGTATGAAGACATGC...GCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp TGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGTGAGAAAATTAAATAAAAGTCAAACGTaGGGTCACACTTTCCCATCT +
Preference number: 4 (lower is better)
Translates to: WLLAPDSPSLQRMWVRKLNKSQT*GHTFPS
Trigger: AGATGGGAAAGTGTGACCTCACGTTTGACTTTTATT...TAATTTTCTCACCCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp ATAAGACACCACCAGATCCTTGGGGTTGCGAGCCATATAGATGACCTTGGAGTCACTGTCTGGGTATTGTaGGCATGCAGGTTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: IRHHQILGVASHIDDLGVTVWVL*ACRLLF
Trigger: AAACAACAACCTGCATGCTCACAATACCCAGACAGT...GACTCCAAGGTCATCTATATGGCTCGCAACCCCAAGGATCTGGTGGTGTCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432404.5
CDS-3UTR TCA 90 bp ACCTGCCTGGCCACGCTTCTCCCCATTACAAACAAAAACACAAGCTTCTCTCTATATCTCAGAACCAAGTaGGAACAGAATGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: TCLATLLPITNKNTSFSLYLRTK*EQNGCA
Trigger: GGCACAGCCATTCTGTTCTCACTTGGTTCTGAGATA...TAGAGAGAAGCTTGTGTTTTTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp CAAGCAAGCACAGAAGGATCATGTGTAGTGCTCAGTAACATCCATACAGTACTATTCCAGCCACATAAATaGCAGACAACCCCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QASTEGSCVVLSNIHTVLFQPHK*QTTPVP
Trigger: GGGGACCGGGGTTGTCTGTCATTTATGTGGCTGGAA...TAGTACTGTATGGATGTTACTGAGCACTACACATGATCCTTCTGTGCTTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TTTGTAATCAGACATGGAGAGGCTGCACGTTCTAAAGGCGAGACAGCTGCTTTCAGAATTCTTGAAAGGTaGCTCGGTAGCTCATGGTCC +
Preference number: 4 (lower is better)
Translates to: FVIRHGEAARSKGETAAFRILER*LGSSWS
Trigger: GGACCATGAGCTACCGAGGCACCTTTCAAGAATTCT...GAAAGCAGCTGTCTCGCCTTTAGAACGTGCAGCCTCTCCATGTCTGATTACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GTCCAGCAAGGAATAAATGAATGCATACAGGACTTTTGGCTAGTAGACTGTCTGTGCTCCCAGAACTCCTaGACGTGCTCAAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: VQQGINECIQDFWLVDCLCSQNS*TCSNQE
Trigger: CTCCTGGTTTGAGCACGTGCAGGAGTTCTGGGAGCA...CAGACAGTCTACTAGCCAAAAGTCCTGTATGCATTCATTTATTCCTTGCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GCTGGAAGTCTCTGGCAGAAGGACGTCCATTCTGAAGACCTAGTGAACAATTTCCCAGGCCATTGGAACTaGAATGTGGAGACTGTTTGT +
Preference number: 4 (lower is better)
Translates to: AGSLWQKDVHSEDLVNNFPGHWN*NVETVC
Trigger: ACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGG...GAAATTGTTCACTAGGTCTTCAGAATGGACGTCCTTCTGCCAGAGACTTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp CCTTACGGTCCAGGCCATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACAACTGTCTGGGTATTGTaGGCATGCAGGTTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: PYGPGHWNCNVETVCNQTTVWVL*ACRLLF
Trigger: AAACAACAACCTGCATGCTCACAATACCCAGACAGT...TGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp TACGGGGTTGAAAAGGCAGACATTCTAGTTGCATATATTACAGGCTTTATCCTTAGATACACGGAGGGATaGGGTGGACAGACACGCAGG +
Preference number: 4 (lower is better)
Translates to: YGVEKADILVAYITGFILRYTEG*GGQTRR
Trigger: CCTGCGTGTCTGTCCACCTCATCCCTCCGTGTATCT...AAGGATAAAGCCTGTAATATATGCAACTAGAATGTCTGCCTTTTCAACCCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp AAGTCAAACTTCTCATTCATGGAGACGGTGAAGATGTCCTTCCACAGCCCAACTAGAATTCTTGAAAGGTaGCTCGGTAGCTCATGGTCC +
Preference number: 4 (lower is better)
Translates to: KSNFSFMETVKMSFHSPTRILER*LGSSWS
Trigger: GGACCATGAGCTACCGAGGCACCTTTCAAGAATTCT...AGTTGGGCTGTGGAAGGACATCTTCACCGTCTCCATGAATGAGAAGTTTGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TTTACTATTAAGCATCTGCTTGCCAGCATTAGTAGGCTATCACTTCAGGAAACATTCGAGTCCATGCGGTaGTCCCAGAACTCCTGCACG +
Preference number: 4 (lower is better)
Translates to: FTIKHLLASISRLSLQETFESMR*SQNSCT
Trigger: CGTGCAGGAGTTCTGGGAGCACCGCATGGACTCGAA...TGTTTCCTGAAGTGATAGCCTACTAATGCTGGCAAGCAGATGCTTAATAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCTTACTATTAAGCATCTaGTTGCCAGCATTAGTAGGC +
Preference number: 4 (lower is better)
Translates to: SLYTRFKYSTKNGDPFHSLLLSI*LPALVG
Trigger: GCCTACTAATGCTGGCAAGCAGATGCTTAATAGTAA...GCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp ATGCATACAGGACTTTTGGCTAGTAGACTGTCTGGGTATTGTGAGCATGCAGGTATCAAATCTAAGCAATaGAGCTGGCTACTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: MHTGLLASRLSGYCEHAGIKSKQ*SWLLGP
Trigger: AGGGCCGAGTAGCCAGCTGCATTGCTTAGATTTGAT...ACCTGCATGCTCACAATACCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422525.1
CDS-3UTR CCA 90 bp CAAAAACACAAGCTTCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACAGCTGCTTTCGGTTaGGAATCATCACACTCCCTC +
Preference number: 4 (lower is better)
Translates to: QKHKLLSTPVSNTAPRTETAAFG*ESSHSL
Trigger: GAGGGAGTGTGATGATTCCCAACCGAAAGCAGCTGT...CTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGAAGCTTGTGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp TTTACTATTAAGCATCTGCTTGCCAGCATTAGTAGGCTATCACTTCAGGAAACATTTGGAGCCGCCCGCTaGAAGTCTCTGGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: FTIKHLLASISRLSLQETFGAAR*KSLAEG
Trigger: TCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAA...TGTTTCCTGAAGTGATAGCCTACTAATGCTGGCAAGCAGATGCTTAATAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp TCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCAACAAAGTAAGGCTGTaGAATTCAGCTCAAATTCCG +
Preference number: 4 (lower is better)
Translates to: SLYTRFKYSTKNGDPFHSNKVRL*NSAQIP
Trigger: CGGAATTTGAGCTGAATTCCACAGCCTTACTTTGTT...GCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp TACGGTCCAGGCCATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGGCATGTCTTCATACTTaGGAAAAAGCACGTTCGAGT +
Preference number: 4 (lower is better)
Translates to: YGPGHWNCNVETVCNQTWACLHT*EKARSS
Trigger: ACTCGAACGTGCTTTTTCTCAAGTATGAAGACATGC...CCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp AGTGAAGCAATAAAGACCTCACCTTTACTCCCTCAGATACACGGAGGGATGAGGGCATGTCTTCATACTTaGGAAAAAGCACGTTCGAGT +
Preference number: 4 (lower is better)
Translates to: SEAIKTSPLLPQIHGGMRACLHT*EKARSS
Trigger: ACTCGAACGTGCTTTTTCTCAAGTATGAAGACATGC...CCTCATCCCTCCGTGTATCTGAGGGAGTAAAGGTGAGGTCTTTATTGCTTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGTGAGAAAATTACAAGGAATAAATGAATaGATACAGGACTTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: WLLAPDSPSLQRMWVRKLQGINE*IQDFWL
Trigger: TAGCCAAAAGTCCTGTATGCATTCATTTATTCCTTG...TAATTTTCTCACCCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CTTTTGGCTAGTAGACTGTCTGGGTATTGTGAGCATGCAGGTTGTTGTTTCTGTCCAGGCCATTGGAACTaGAATGTGGAGACTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LLASRLSGYCEHAGCCFCPGHWN*NVETVC
Trigger: ACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGG...ACAGAAACAACAACCTGCATGCTCACAATACCCAGACAGTCTACTAGCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp AGAGTTAACCCTGAGATCTTTCTACCATTCGGGTGTGGCTCGCTCCTGATTCCCATTGGAACTGCAATGTaGAGACTGTTTGTAATCAGA +
Preference number: 4 (lower is better)
Translates to: RVNPEIFLPFGCGSLLIPIGTAM*RLFVIR
Trigger: TCTGATTACAAACAGTCTCCACATTGCAGTTCCAAT...GGGAATCAGGAGCGAGCCACACCCGAATGGTAGAAAGATCTCAGGGTTAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp GGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAGAGGCTGCACGTTCTACAATAATACGGGGTTaGAAAGGCAGACATTCTAGT +
Preference number: 4 (lower is better)
Translates to: GTAMWRLFVIRHGEAARSTIIRG*KGRHSS
Trigger: ACTAGAATGTCTGCCTTTTCAACCCCGTATTATTGT...AGAACGTGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR TCA 90 bp ACGGTCCAGGCCATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAACAATAATACGGGGTTaGAAAGGCAGACATTCTAGT +
Preference number: 4 (lower is better)
Translates to: TVQAIGTAMWRLFVIRHGTIIRG*KGRHSS
Trigger: ACTAGAATGTCTGCCTTTTCAACCCCGTATTATTGT...TCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCAGGGCAGACATTCTAGTTaGATATATTACAGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: SLHPFQIQHQERRPLPQQGRHSS*IYYRLY
Trigger: ATAAAGCCTGTAATATATGCAACTAGAATGTCTGCC...CTGCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp TTCTCTCTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGATTGGAACTGCAATGTaGAGACTGTTTGTAATCAGA +
Preference number: 4 (lower is better)
Translates to: FSLHPFQIQHQERRPLPQIGTAM*RLFVIR
Trigger: TCTGATTACAAACAGTCTCCACATTGCAGTTCCAAT...CTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAGAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp CTTACGGTCCAGGCCATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATCAGCCCAACTCTTCCTaGTTTAGGATTTGGAATCAA +
Preference number: 4 (lower is better)
Translates to: LTVQAIGTAMWRLFVIRHQPNSS*FRIWNQ
Trigger: TTGATTCCAAATCCTAAACCAGGAAGAGTTGGGCTG...ATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422525.1
CDS-3UTR GCA 90 bp TGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAGAGGCTGCACGTTCCTAGTGAACAATTTCTaGTCATTTCAGGAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: WNCNVETVCNQTWRGCTFLVNNF*SFQEGS
Trigger: AGAACCTTCCTGAAATGAGCAGAAATTGTTCACTAG...GAACGTGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp GGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAGAGGCTGCACGTTCTCTAGTGAACAATTTCTaGTCATTTCAGGAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GTAMWRLFVIRHGEAARSLVNNF*SFQEGS
Trigger: AGAACCTTCCTGAAATGAGCAGAAATTGTTCACTAG...AGAACGTGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp AGAAATTTACTATTAAGCATCTGCTTGCCAGCATTAGTAGGCTATCACTTCAGGACAGCTGCTTTCGGTTaGGAATCATCACACTCCCTC +
Preference number: 4 (lower is better)
Translates to: RNLLLSICLPALVGYHFRTAAFG*ESSHSL
Trigger: GAGGGAGTGTGATGATTCCCAACCGAAAGCAGCTGT...CCTGAAGTGATAGCCTACTAATGCTGGCAAGCAGATGCTTAATAGTAAATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp TTTGTAATCAGACATGGAGAGGCTGCACGTTCTAAAGGCGAGACAGCTGCTTTCGGCAGACATTCTAGTTaGATATATTACAGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: FVIRHGEAARSKGETAAFGRHSS*IYYRLY
Trigger: ATAAAGCCTGTAATATATGCAACTAGAATGTCTGCC...GAAAGCAGCTGTCTCGCCTTTAGAACGTGCAGCCTCTCCATGTCTGATTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CCA 90 bp TACGGGGTTGAAAAGGCAGACATTCTAGTTGCATATATTACAGGCTTTATCCTTTGCATACAGGACTTTTaGCTAGTAGACTGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: YGVEKADILVAYITGFILCIQDF*LVDCLG
Trigger: ACCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCA...AAGGATAAAGCCTGTAATATATGCAACTAGAATGTCTGCCTTTTCAACCCCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp CAAGCAAGCACAGAAGGATCATGTGTAGTGCTCAGTAACATCCATACAGTACTACTAGTGAACAATTTCTaGTCATTTCAGGAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QASTEGSCVVLSNIHTVLLVNNF*SFQEGS
Trigger: AGAACCTTCCTGAAATGAGCAGAAATTGTTCACTAG...TAGTACTGTATGGATGTTACTGAGCACTACACATGATCCTTCTGTGCTTGCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR GCA 90 bp AGAAATTTACTATTAAGCATCTGCTTGCCAGCATTAGTAGGCTATCACTTCAGGTTACTATTAAGCATCTaGTTGCCAGCATTAGTAGGC +
Preference number: 4 (lower is better)
Translates to: RNLLLSICLPALVGYHFRLLLSI*LPALVG
Trigger: GCCTACTAATGCTGGCAAGCAGATGCTTAATAGTAA...CCTGAAGTGATAGCCTACTAATGCTGGCAAGCAGATGCTTAATAGTAAATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS CCA 90 bp GGGCACGTACCCCGGCCCACGGGCAGGGCCTCAGCGTTGCAGCACTaGTCCACCAGCTGGTGGCAGTGCTCCGTCAGGGCTTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GHVPRPTGRASALQH*STSWWQCSVRASSW
Trigger: CCAGCTGGAAGCCCTGACGGAGCACTGCCACCAGCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGCCCGTGGGCCGGGGTACGTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475131.1
CDS-3UTR CAA 90 bp CACGGGGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGGCAGGGCCTCAGCGTaGCAGCACTGGTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: HGVGWLLAPDSPSLQRMWGRASA*QHWSTS
Trigger: GCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGCC...CCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACCCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp GCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGAGCGGGCTCCTCTGCATaGGGCCTTTGGAGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: APLHWAFGAARWKSLAEGAGSSA*GLWSRP
Trigger: CGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGC...TCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS CCA 90 bp ATCTCCTCCATCTTCCCGCGGCAGAAGGGCGGCAGCCGCACGCCATaGAACTCGAAGTACTTGCTCTCGAACTCCCCCGGGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: ISSIFPRQKGGSRTP*NSKYLLSNSPGVLG
Trigger: CCCCAGCACCCCGGGGGAGTTCGAGAGCAAGTACTTCGAGTTCCATGGCGTGCGGCTGCCGCCCTTCTGCCGCGGGAAGATGGAGGAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp CACGGGGTTGGCTGGCTACTGGCCCCCGACTCTCCATCGCTTCAGCGAATGTGGGCTTCCAGCTGGGCCTaGTCACAGGACACCCCCAGG +
Preference number: 5 (lower is better)
Translates to: HGVGWLLAPDSPSLQRMWASSWA*SQDTPR
Trigger: CCTGGGGGTGTCCTGTGACAAGGCCCAGCTGGAAGC...CCACATTCGCTGAAGCGATGGAGAGTCGGGGGCCAGTAGCCAGCCAACCCCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp CCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCATGCGATGCCACGTGGGCAGGGCCTCAGCGTaGCAGCACTGGTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: PSQKHRQGAAEPTMRCHVGRASA*QHWSTS
Trigger: GCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGCC...CACGTGGCATCGCATGGTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp CACGCAGGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAGCGGGCTCCTCTGCATaGGGCCTTTGGAGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: HAGGRANLIRVKQGYTRKAGSSA*GLWSRP
Trigger: CGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGC...TTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp CTCCGCTCACGCCGCTCTTCCCTTCCCCCGCTGTTTCACACGCTGCTTCCAGAGCTCTGCATTGGGCCTTaGGAGCCGCCCGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: LRSRRSSLPPLFHTLLPELCIGP*EPPAGS
Trigger: ACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAG...CTCTGGAAGCAGCGTGTGAAACAGCGGGGGAAGGGAAGAGCGGCGTGAGCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp TTTCGGTTGGGAATCATCACACTCCCTCCGCTCACGCCGCTCTTCCCTTCCCCCGCTTCCAGCTGGGCCTaGTCACAGGACACCCCCAGG +
Preference number: 5 (lower is better)
Translates to: FRLGIITLPPLTPLFPSPASSWA*SQDTPR
Trigger: CCTGGGGGTGTCCTGTGACAAGGCCCAGCTGGAAGC...GGGGGAAGGGAAGAGCGGCGTGAGCGGAGGGAGTGTGATGATTCCCAACCGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS GCA 90 bp TTGATGATGTCCAGGCCCGGCTGTGGGTACTCCAGGACCGGGAGCTaGTCGTCGATGTTCATCAAGCCGATCTCATCGGGGTCAGCGCCC +
Preference number: 5 (lower is better)
Translates to: LMMSRPGCGYSRTGS*SSMFIKPISSGSAP
Trigger: GGGCGCTGACCCCGATGAGATCGGCTTGATGAACATCGACGAGCAGCTCCCGGTCCTGGAGTACCCACAGCCGGGCCTGGACATCATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330884.9
ENST00000422525.1
CDS CCA 90 bp GAGGCGGGGAGAGGTCAGTTCCTTGATGATGTCCAGGCCCGGCTGTaGGTACTCCAGGACCGGGAGCTGCTCGTCGATGTTCATCAAGCC +
Preference number: 5 (lower is better)
Translates to: EAGRGQFLDDVQARL*VLQDRELLVDVHQA
Trigger: GGCTTGATGAACATCGACGAGCAGCTCCCGGTCCTGGAGTACCCACAGCCGGGCCTGGACATCATCAAGGAACTGACCTCTCCCCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330884.9
ENST00000422525.1
CDS-3UTR CAA 90 bp ATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCAAGCTTCCAGCTGGGCCTaGTCACAGGACACCCCCAGG +
Preference number: 5 (lower is better)
Translates to: IPSATRSFGGRLSTHCMQASSWA*SQDTPR
Trigger: CCTGGGGGTGTCCTGTGACAAGGCCCAGCTGGAAGC...TTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp GCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCAAATGCTCCTGGCGCAACTCGGTCCTTaGGTGGCCGACTCTCCACCC +
Preference number: 5 (lower is better)
Translates to: ATRSFGGRLSTHCMQMLLAQLGP*VADSPP
Trigger: GGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGC...CAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp GGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAATGGTCGCGCAACTCGGTCCTTaGGTGGCCGACTCTCCACCC +
Preference number: 5 (lower is better)
Translates to: GGRANLIRVKQGYTRKMVAQLGP*VADSPP
Trigger: GGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGC...GACCATTTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp GCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCAAATGCTCCTGGGCCGCACCGGGAAGTaGGCGATCTCCTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: ATRSFGGRLSTHCMQMLLGRTGK*AISSIF
Trigger: GAAGATGGAGGAGATCGCCAACTTCCCGGTGCGGCC...CAGGAGCATTTGCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp GGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAATGGTCGGCCGCACCGGGAAGTaGGCGATCTCCTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: GGRANLIRVKQGYTRKMVGRTGK*AISSIF
Trigger: GAAGATGGAGGAGATCGCCAACTTCCCGGTGCGGCC...GACCATTTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp AAGAACGGAGACCCCTTCCACAGCAGCGACCCTCCTGACCACCACTTTGGGTGCGGAGAGGTCAGTTCCTaGATGATGTCCAGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: KNGDPFHSSDPPDHHFGCGEVSS*MMSRPG
Trigger: GCCGGGCCTGGACATCATCAAGGAACTGACCTCTCC...GCACCCAAAGTGGTGGTCAGGAGGGTCGCTGCTGTGGAAGGGGTCTCCGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330884.9
ENST00000422525.1
CDS-3UTR CAA 90 bp CGGGCTCCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAACCTCCGGCAGAATTCTaGAAAGGTGCCTCGGTAGCT +
Preference number: 5 (lower is better)
Translates to: RAPLHWAFGAARWKSLAEPPAEF*KGASVA
Trigger: AGCTACCGAGGCACCTTTCAAGAATTCTGCCGGAGG...TTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp TCACAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCTCTGCATTGGGCCTTaGGAGCCGCCCGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: SQKAASLTETQARCCRAHLCIGP*EPPAGS
Trigger: ACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAG...GTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp CTACACCCGTTTCAAATACAGCACCAAGAACGGAGACCCCTTCCACAGCAGCGAGCGGGCTCCTCTGCATaGGGCCTTTGGAGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: LHPFQIQHQERRPLPQQRAGSSA*GLWSRP
Trigger: CGGGCGGCTCCAAAGGCCCAATGCAGAGGAGCCCGC...TCGCTGCTGTGGAAGGGGTCTCCGTTCTTGGTGCTGTATTTGAAACGGGTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS TCA 90 bp TGGAGGCAATGCAAACACCAGCGGGCAGGGTACTCCGTCACTCCATaGGCACTGTGCCATCCATGGGCACCAGCTAACAGAGCACAGGCC +
Preference number: 5 (lower is better)
Translates to: WRQCKHQRAGYSVTP*ALCHPWAPANRAQA
Trigger: GGCCTGTGCTCTGTTAGCTGGTGCCCATGGATGGCACAGTGCTCATGGAGTGACGGAGTACCCTGCCCGCTGGTGTTTGCATTGCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475131.1
CDS-3UTR CAA 90 bp CCATGCGATGCCACGTGCCACCTGCCTGGCCACGCTTCTCCCCATTACAAACAAGGAGAGGTCAGTTCCTaGATGATGTCCAGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: PCDATCHLPGHASPHYKQGEVSS*MMSRPG
Trigger: GCCGGGCCTGGACATCATCAAGGAACTGACCTCTCC...TTGTTTGTAATGGGGAGAAGCGTGGCCAGGCAGGTGGCACGTGGCATCGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330884.9
ENST00000422525.1
CDS-3UTR CAA 90 bp CCTCTGCATTGGGCCTTTGGAGCCGCCCGCTGGAAGTCTCTGGCAGAAGGACGTCCTCCGGCAGAATTCTaGAAAGGTGCCTCGGTAGCT +
Preference number: 5 (lower is better)
Translates to: PLHWAFGAARWKSLAEGRPPAEF*KGASVA
Trigger: AGCTACCGAGGCACCTTTCAAGAATTCTGCCGGAGG...ACGTCCTTCTGCCAGAGACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp GAGGTGGACAGACACGCAGGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTTACGGTCCAGGCCATaGGAACTGCAATGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: EVDRHAGGRANLIRVKQGLRSRP*ELQCGD
Trigger: GTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAA...GCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCCTGCGTGTCTGTCCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp CAGGGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCACAGTTACGGTCCAGGCCATaGGAACTGCAATGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: QGYTRKMVLPRLSASGAQLRSRP*ELQCGD
Trigger: GTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAA...CTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp GCTGTGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCTGCATTGGGCCTTaGGAGCCGCCCGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: AVEFSSNSERNSVLWWPTLCIGP*EPPAGS
Trigger: ACTTCCAGCGGGCGGCTCCAAAGGCCCAATGCAGAG...AGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp GGCTGTGGAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTGGAACTCGAAGTACTaGCTCTCGAACTCCCCCGGG +
Preference number: 5 (lower is better)
Translates to: GCGIQLKFRAQLGPLVADWNSKY*LSNSPG
Trigger: CCCGGGGGAGTTCGAGAGCAAGTACTTCGAGTTCCA...GTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTCCACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp AAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACCCACTGCATGCACCTTGGAGTCTCCATaGTGGAGGTCAGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: KFRAQLGPLVADSPPTACTLESP*WRSEGR
Trigger: TCTGCCCTCTGACCTCCACAATGGAGACTCCAAGGT...GCATGCAGTGGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp TCACAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCCACCTCCTGACCACCACTTaGGGTGCTTTCCAGCCACAT +
Preference number: 5 (lower is better)
Translates to: SQKAASLTETQARCCRAHLLTTT*GAFQPH
Trigger: ATGTGGCTGGAAAGCACCCAAAGTGGTGGTCAGGAG...GTGGGCTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp CGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAATGGTCCTACCTTGGAGTCTCCATaGTGGAGGTCAGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: RPCQPDPSETGLHSQNGPTLESP*WRSEGR
Trigger: TCTGCCCTCTGACCTCCACAATGGAGACTCCAAGGT...AGGACCATTTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp TTTGTAATCAGACATGGAGAGGCTGCACGTTCTAAAGGCGAGACAGCTGCTTTCGGCAGGGCCTCAGCGTaGCAGCACTGGTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: FVIRHGEAARSKGETAAFGRASA*QHWSTS
Trigger: GCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGCC...GAAAGCAGCTGTCTCGCCTTTAGAACGTGCAGCCTCTCCATGTCTGATTACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp AAACAGGGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCAGACAGCTGCTTTCGGTaGGGAATCATCACACTCCCT +
Preference number: 5 (lower is better)
Translates to: KQGYTRKMVLPRLSASGADSCFR*GIITLP
Trigger: AGGGAGTGTGATGATTCCCAACCGAAAGCAGCTGTC...TGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCCCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp GGCGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAATGGTCTTACGGTCCAGGCCATaGGAACTGCAATGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: GGRANLIRVKQGYTRKMVLRSRP*ELQCGD
Trigger: GTCTCCACATTGCAGTTCCAATGGCCTGGACCGTAA...GACCATTTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp AAATTTCACAGAAAGCAGCCTCCCTCACAGAAACACAGGCAAGGTGCTGCCGAGCCTCCGGCAGAATTCTaGAAAGGTGCCTCGGTAGCT +
Preference number: 5 (lower is better)
Translates to: KFHRKQPPSQKHRQGAAEPPAEF*KGASVA
Trigger: AGCTACCGAGGCACCTTTCAAGAATTCTGCCGGAGG...CTCGGCAGCACCTTGCCTGTGTTTCTGTGAGGGAGGCTGCTTTCTGTGAAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp GGCTACACTCGCAAAATGGTCCTCCCACGGCTGAGCGCCTCAGGTGCACAGAACTGCATGTCTTCATACTaGAGAAAAAGCACGTTCGAG +
Preference number: 5 (lower is better)
Translates to: GYTRKMVLPRLSASGAQNCMSSY*RKSTFE
Trigger: CTCGAACGTGCTTTTTCTCAAGTATGAAGACATGCA...GTTCTGTGCACCTGAGGCGCTCAGCCGTGGGAGGACCATTTTGCGAGTGTAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp AAGAACGGAGACCCCTTCCACAGCAGCGACCCTCCTGACCACCACTTTGGGTGCTGCATGTCTTCATACTaGAGAAAAAGCACGTTCGAG +
Preference number: 5 (lower is better)
Translates to: KNGDPFHSSDPPDHHFGCCMSSY*RKSTFE
Trigger: CTCGAACGTGCTTTTTCTCAAGTATGAAGACATGCA...GCACCCAAAGTGGTGGTCAGGAGGGTCGCTGCTGTGGAAGGGGTCTCCGTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp CGGCCGTGCCAACCTGATCCGAGTGAAACAGGGCTACACTCGCAAAATGGTCCTATGCATACAGGACTTTaGGCTAGTAGACTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: RPCQPDPSETGLHSQNGPMHTGL*ASRLSG
Trigger: CCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCAT...AGGACCATTTTGCGAGTGTAGCCCTGTTTCACTCGGATCAGGTTGGCACGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp AGAGTTAACCCTGAGATCTTTCTACCATTCGGGTGTGGCTCGCTCCTGATTCCCCTCCTGACCACCACTTaGGGTGCTTTCCAGCCACAT +
Preference number: 5 (lower is better)
Translates to: RVNPEIFLPFGCGSLLIPLLTTT*GAFQPH
Trigger: ATGTGGCTGGAAAGCACCCAAAGTGGTGGTCAGGAG...GGGAATCAGGAGCGAGCCACACCCGAATGGTAGAAAGATCTCAGGGTTAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp GGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAGAGGCTGCACGTTCTTGGAACTCGAAGTACTaGCTCTCGAACTCCCCCGGG +
Preference number: 5 (lower is better)
Translates to: GTAMWRLFVIRHGEAARSWNSKY*LSNSPG
Trigger: CCCGGGGGAGTTCGAGAGCAAGTACTTCGAGTTCCA...AGAACGTGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp TACGGTCCAGGCCATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGTGGAACTCGAAGTACTaGCTCTCGAACTCCCCCGGG +
Preference number: 5 (lower is better)
Translates to: YGPGHWNCNVETVCNQTWWNSKY*LSNSPG
Trigger: CCCGGGGGAGTTCGAGAGCAAGTACTTCGAGTTCCA...CCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp GAATTCAGCTCAAATTCCGAGCGCAACTCGGTCCTTTGGTGGCCGACTCTCCACATGCATACAGGACTTTaGGCTAGTAGACTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: EFSSNSERNSVLWWPTLHMHTGL*ASRLSG
Trigger: CCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCAT...GTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGCTCGGAATTTGAGCTGAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp CAAGCAAGCACAGAAGGATCATGTGTAGTGCTCAGTAACATCCATACAGTACTAGCGCAACTCGGTCCTTaGGTGGCCGACTCTCCACCC +
Preference number: 5 (lower is better)
Translates to: QASTEGSCVVLSNIHTVLAQLGP*VADSPP
Trigger: GGGTGGAGAGTCGGCCACCAAAGGACCGAGTTGCGC...TAGTACTGTATGGATGTTACTGAGCACTACACATGATCCTTCTGTGCTTGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp TTTGTAATCAGACATGGAGAGGCTGCACGTTCTAAAGGCGAGACAGCTGCTTTCACCTTGGAGTCTCCATaGTGGAGGTCAGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: FVIRHGEAARSKGETAAFTLESP*WRSEGR
Trigger: TCTGCCCTCTGACCTCCACAATGGAGACTCCAAGGT...GAAAGCAGCTGTCTCGCCTTTAGAACGTGCAGCCTCTCCATGTCTGATTACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp GTCAAACTTCTCATTCATGGAGACGGTGAAGATGTCCTTCCACAGCCCAACTCTCTCCTGACCACCACTTaGGGTGCTTTCCAGCCACAT +
Preference number: 5 (lower is better)
Translates to: VKLLIHGDGEDVLPQPNSLLTTT*GAFQPH
Trigger: ATGTGGCTGGAAAGCACCCAAAGTGGTGGTCAGGAG...AGAGTTGGGCTGTGGAAGGACATCTTCACCGTCTCCATGAATGAGAAGTTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp ACGGTCCAGGCCATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAGACAGCTGCTTTCGGTaGGGAATCATCACACTCCCT +
Preference number: 5 (lower is better)
Translates to: TVQAIGTAMWRLFVIRHGDSCFR*GIITLP
Trigger: AGGGAGTGTGATGATTCCCAACCGAAAGCAGCTGTC...TCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAATGGCCTGGACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp ATTGGAACTGCAATGTGGAGACTGTTTGTAATCAGACATGGAGAGGCTGCACGTGACAGCTGCTTTCGGTaGGGAATCATCACACTCCCT +
Preference number: 5 (lower is better)
Translates to: IGTAMWRLFVIRHGEAARDSCFR*GIITLP
Trigger: AGGGAGTGTGATGATTCCCAACCGAAAGCAGCTGTC...ACGTGCAGCCTCTCCATGTCTGATTACAAACAGTCTCCACATTGCAGTTCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS-3UTR CAA 90 bp TTTACTATTAAGCATCTGCTTGCCAGCATTAGTAGGCTATCACTTCAGGAAACAATGCATACAGGACTTTaGGCTAGTAGACTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: FTIKHLLASISRLSLQETMHTGL*ASRLSG
Trigger: CCCAGACAGTCTACTAGCCAAAAGTCCTGTATGCAT...TGTTTCCTGAAGTGATAGCCTACTAATGCTGGCAAGCAGATGCTTAATAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS CCA 72 bp GCCCGGCCCACGGGCAGGGCCTCAGCGTTGCAGCACTaGTCCACCAGCTGGTGGCAGTGCTCCGTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: ARPTGRASALQH*STSWWQCSVRA
Trigger: AGCCCTGACGGAGCACTGCCACCAGCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGCCCGTGGGCCGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422525.1
CDS CAA 72 bp GGGCACGTACCCCGGCCCACGGGCAGGGCCTCAGCGTaGCAGCACTGGTCCACCAGCTGGTGGCAGTGCTCC +
Preference number: 6 (lower is better)
Translates to: GHVPRPTGRASA*QHWSTSWWQCS
Trigger: GGAGCACTGCCACCAGCTGGTGGACCAGTGCTGCAACGCTGAGGCCCTGCCCGTGGGCCGGGGTACGTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475131.1
CDS TCA 72 bp CCTCCTGCAGCAAGCTGGTGCCGGACTTGGGGTAGGTaGCGATCCACACGTCGCTGGGCCGCACCGGGAAGT +
Preference number: 6 (lower is better)
Translates to: PPAASWCRTWGR*RSTRRWAAPGS
Trigger: ACTTCCCGGTGCGGCCCAGCGACGTGTGGATCGTCACCTACCCCAAGTCCGGCACCAGCTTGCTGCAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330884.9
ENST00000422525.1
CDS TCA 72 bp GAGGCGGGGAGAGGTCAGTTCCGGACTTGGGGTAGGTaGCGATCCACACGTCGCTGGGCCGCACCGGGAAGT +
Preference number: 6 (lower is better)
Translates to: EAGRGQFRTWGR*RSTRRWAAPGS
Trigger: ACTTCCCGGTGCGGCCCAGCGACGTGTGGATCGTCACCTACCCCAAGTCCGGAACTGACCTCTCCCCGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432404.5
CDS CAA 72 bp GTGACGATCCACACGTCGCTGGGCCGCACCGGGAAGTaGGCGATCTCCTCCATCTTCCCGCGGCAGAAGGGC +
Preference number: 6 (lower is better)
Translates to: VTIHTSLGRTGK*AISSIFPRQKG
Trigger: GCCCTTCTGCCGCGGGAAGATGGAGGAGATCGCCAACTTCCCGGTGCGGCCCAGCGACGTGTGGATCGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS CCA 72 bp ATCTTCCCGCGGCAGAAGGGCGGCAGCCGCACGCCATaGAACTCGAAGTACTTGCTCTCGAACTCCCCCGGG +
Preference number: 6 (lower is better)
Translates to: IFPRQKGGSRTP*NSKYLLSNSPG
Trigger: CCCGGGGGAGTTCGAGAGCAAGTACTTCGAGTTCCATGGCGTGCGGCTGCCGCCCTTCTGCCGCGGGAAGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330884.9
ENST00000422525.1
ENST00000432404.5
CDS GCA 72 bp TCCAGGCCCGGCTGTGGGTACTCCAGGACCGGGAGCTaGTCGTCGATGTTCATCAAGCCGATCTCATCGGGG +
Preference number: 6 (lower is better)
Translates to: SRPGCGYSRTGS*SSMFIKPISSG
Trigger: CCCCGATGAGATCGGCTTGATGAACATCGACGAGCAGCTCCCGGTCCTGGAGTACCCACAGCCGGGCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330884.9
ENST00000422525.1
CDS CCA 72 bp AGAGGTCAGTTCCTTGATGATGTCCAGGCCCGGCTGTaGGTACTCCAGGACCGGGAGCTGCTCGTCGATGTT +
Preference number: 6 (lower is better)
Translates to: RGQFLDDVQARL*VLQDRELLVDV
Trigger: AACATCGACGAGCAGCTCCCGGTCCTGGAGTACCCACAGCCGGGCCTGGACATCATCAAGGAACTGACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330884.9
ENST00000422525.1
CDS TCA 72 bp TGCAAACACCAGCGGGCAGGGTACTCCGTCACTCCATaGGCACTGTGCCATCCATGGGCACCAGCTAACAGA +
Preference number: 6 (lower is better)
Translates to: CKHQRAGYSVTP*ALCHPWAPANR
Trigger: TCTGTTAGCTGGTGCCCATGGATGGCACAGTGCTCATGGAGTGACGGAGTACCCTGCCCGCTGGTGTTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475131.1
CDS GCA 72 bp CTTTTTCAAGTCAAAACACTGTTTGCTTGGAGGCAATaGAAACACCAGCGGGCAGGGTACTCCGTCACTCCA +
Preference number: 6 (lower is better)
Translates to: LFQVKTLFAWRQ*KHQRAGYSVTP
Trigger: TGGAGTGACGGAGTACCCTGCCCGCTGGTGTTTGCATTGCCTCCAAGCAAACAGTGTTTTGACTTGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475131.1