RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SULF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000196562

Ensembl transcript IDs: ENST00000359930.8, ENST00000433632.1, ENST00000437955.1, ENST00000463221.2, ENST00000465769.1, ENST00000467815.5, ENST00000474450.5, ENST00000478766.1, ENST00000479970.1, ENST00000484875.5, ENST00000495544.5

Found 809 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTaGTTGCTTTCTCAGGCCTCCTGGCCAATACCACAGGTCTGCTGG +
Preference number: 1 (lower is better)
Translates to: PAGYPPESVMLTESA*LLSQASWPIPQVCW
Trigger: CCAGCAGACCTGTGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR TCA 90 bp TATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTaGGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCACA +
Preference number: 1 (lower is better)
Translates to: YLCSCWLSSRICHVD*ECVLAFSGLLANTT
Trigger: TGTGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR TCA 90 bp AAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTaGCTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATAC +
Preference number: 1 (lower is better)
Translates to: KLSLLLLVILQNLSC*LRVRACFLRPPGQY
Trigger: GTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR TCA 90 bp CGTCATCTGTTAAATGAGAAATGGGTTGGACTGGTGATTGATAGTTaGAATCTGTCAACTACTTGTATCAGGTTAGACTACCTGATACAC +
Preference number: 1 (lower is better)
Translates to: RHLLNEKWVGLVIDS*NLSTTCIRLDYLIH
Trigger: GTGTATCAGGTAGTCTAACCTGATACAAGTAGTTGACAGATTTCAACTATCAATCACCAGTCCAACCCATTTCTCATTTAACAGATGACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359930.8
3UTR-3UTR GCA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTCTGAGAGTGCGTGCTTaGTTTCTCAGGCCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVLRVRA*FLRPPG
Trigger: GCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAG...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGCTTTCTCAGGCCTCCTaGCCAATACCACAGGTCTGC +
Preference number: 2 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRLSQAS*PIPQVC
Trigger: GCAGACCTGTGGTATTGGCCAGGAGGCCTGAGAAAG...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTCTTTCTCAGGCCTCCTaGCCAATACCACAGGTCTGC +
Preference number: 2 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVLSQAS*PIPQVC
Trigger: GCAGACCTGTGGTATTGGCCAGGAGGCCTGAGAAAG...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR TCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGCCTGTGCAGTCAGGTaGTGCCTCTATGTTTTTGGA +
Preference number: 2 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRACAVR*CLYVFG
Trigger: TCCAAAAACATAGAGGCATCACCTGACTGCACAGGC...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR TCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGCAGAATCTGTCATGTTaGCTGAGAGTGCGTGCTTGC +
Preference number: 2 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRQNLSC*LRVRAC
Trigger: GCAAGCACGCACTCTCAGTCAACATGACAGATTCTG...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTCCAATACCACAGGTCTaGTGGAAATCACCCACATGG +
Preference number: 2 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSPIPQV*WKSPTW
Trigger: CCATGTGGGTGATTTCCAGCAGACCTGTGGTATTGG...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR CAA 90 bp GCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTaGCTTTCTCAGGCCTCCTGGCCAATACCACAGGTCTGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: AGYPPESVMLTESAC*LSQASWPIPQVCWK
Trigger: TTTCCAGCAGACCTGTGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp GCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCTTGACTGAGAGTGCGTaGTTGCTTTCTCAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: ATDSLSNVSALFSASPRCLTESA*LLSQAS
Trigger: GGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAA...GCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGATACCACAGGTCTGCTaGAAATCACCCACATGGTTT +
Preference number: 2 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRIPQVC*KSPTWF
Trigger: AAACCATGTGGGTGATTTCCAGCAGACCTGTGGTAT...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR CAA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTaGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATA +
Preference number: 2 (lower is better)
Translates to: EVISAPAGYPPESVM*TESACLLSQASWPI
Trigger: TATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR CAA 90 bp AACGCCACTAGGGAGTTGCTAGGGAGCCTTGGCCTGTTTGGGGCATaGAAACAAATGTGGGTGCTTTTAGGGATTATCTCCGTCATCTGT +
Preference number: 2 (lower is better)
Translates to: NATRELLGSLGLFGA*KQMWVLLGIISVIC
Trigger: ACAGATGACGGAGATAATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTCCCTAGCAACTCCCTAGTGGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
3UTR-3UTR TCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTCTCCGTTTTCCTTTGTaGGCTTCTGGGGGAGGGTTA +
Preference number: 2 (lower is better)
Translates to: CATDSLSNVSALFSASPRLRFPL*ASGGGL
Trigger: TAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAG...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACTGAGAGTGCGTGCTTaGTTTCTCAGGCCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: FCATDSLSNVSALFSASPLRVRA*FLRPPG
Trigger: GCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAG...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCCTGAGAGTGCGTGCTTaGTTTCTCAGGCCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLLRVRA*FLRPPG
Trigger: GCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAG...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTTGGAAATCACCCACATaGTTTTTCATTGCCTGTGCA +
Preference number: 2 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSWKSPT*FFIACA
Trigger: TGCACAGGCAATGAAAAACCATGTGGGTGATTTCCA...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGTCCTTTGTGAGCTTCTaGGGGAGGGTTAGTGGTGAC +
Preference number: 2 (lower is better)
Translates to: EGFSFTLATERLLTPPLLSFVSF*GRVSGD
Trigger: GTCACCACTAACCCTCCCCCAGAAGCTCACAAAGGA...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR TCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTGCCTGTGCAGTCAGGTaGTGCCTCTATGTTTTTGGA +
Preference number: 2 (lower is better)
Translates to: CATDSLSNVSALFSASPRACAVR*CLYVFG
Trigger: TCCAAAAACATAGAGGCATCACCTGACTGCACAGGC...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR TCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTATTTTGTGCAGCTGGTaGGGTATAATCCAAAGCAAA +
Preference number: 2 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSILCSW*GIIQSK
Trigger: TTTGCTTTGGATTATACCTCACCAGCTGCACAAAAT...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR TCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTATCTGTCATGTTGACTaGGAGTGCGTGCTTGCTTTC +
Preference number: 2 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLICHVD*ECVLAF
Trigger: GAAAGCAAGCACGCACTCTCAGTCAACATGACAGAT...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR TCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACTCCGTTTTCCTTTGTaGGCTTCTGGGGGAGGGTTA +
Preference number: 2 (lower is better)
Translates to: FCATDSLSNVSALFSASPLRFPL*ASGGGL
Trigger: TAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAG...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCGTTTTTCATTGCCTGTaGAGTCAGGTGATGCCTCTA +
Preference number: 2 (lower is better)
Translates to: YPPESVMLTESACLLSQAVFHCL*SQVMPL
Trigger: TAGAGGCATCACCTGACTGCACAGGCAATGAAAAAC...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp GAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTTGACTGAGAGTGCGTaGTTGCTTTCTCAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: EMSTTARDFLLHWPQSVYLTESA*LLSQAS
Trigger: GGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAA...ATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp ATGTCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTTTGACTGAGAGTGCGTaGTTGCTTTCTCAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: MSKVLHTNCWSLAGVLNTLTESA*LLSQAS
Trigger: GGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAA...AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
3UTR-3UTR TCA 90 bp AATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGCAGAATCTGTCATGTTaGCTGAGAGTGCGTGCTTGC +
Preference number: 2 (lower is better)
Translates to: NVHNCEGFSFTLATERLLQNLSC*LRVRAC
Trigger: GCAAGCACGCACTCTCAGTCAACATGACAGATTCTG...CAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTGTTTTTCATTGCCTGTaGAGTCAGGTGATGCCTCTA +
Preference number: 2 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLVFHCL*SQVMPL
Trigger: TAGAGGCATCACCTGACTGCACAGGCAATGAAAAAC...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGCACATGGTTTTTCATTaGCTGTGCAGTCAGGTGATG +
Preference number: 2 (lower is better)
Translates to: EGFSFTLATERLLTPPLLHMVFH*LCSQVM
Trigger: CATCACCTGACTGCACAGGCAATGAAAAACCATGTG...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTCTGAGAGTGCGTGCTTaGTTTCTCAGGCCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTLRVRA*FLRPPG
Trigger: GCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAG...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTTTGACTGAGAGTGCGTaGTTGCTTTCTCAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPLTESA*LLSQAS
Trigger: GGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAA...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGATTGTCAAACGTCTCTaGACTGTTTTCAGCCTCTCC +
Preference number: 2 (lower is better)
Translates to: EGFSFTLATERLLTPPLLIVKRL*TVFSLS
Trigger: GGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAAT...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCATGCCTCTATGTTTTTaGAGGTCCACCTCTGTTGTT +
Preference number: 2 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAMPLCF*RSTSVV
Trigger: AACAACAGAGGTGGACCTCCAAAAACATAGAGGCAT...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGATACCACAGGTCTGCTaGAAATCACCCACATGGTTT +
Preference number: 2 (lower is better)
Translates to: EGFSFTLATERLLTPPLLIPQVC*KSPTWF
Trigger: AAACCATGTGGGTGATTTCCAGCAGACCTGTGGTAT...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTATCTCTGCTCCTGCTaGTTATCCTCCAGAATCTGT +
Preference number: 2 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLYLCSC*LSSRIC
Trigger: ACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATA...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp AGGGAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATTACACAAAGAAGGGTTaGCCAAGGCGAATTTCTTTG +
Preference number: 2 (lower is better)
Translates to: REPWPVWGIETNVGAFRDYTKKG*PRRISL
Trigger: CAAAGAAATTCGCCTTGGCCAACCCTTCTTTGTGTA...ATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
3UTR-3UTR TCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCGCCTGTGCAGTCAGGTaGTGCCTCTATGTTTTTGGA +
Preference number: 2 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRACAVR*CLYVFG
Trigger: TCCAAAAACATAGAGGCATCACCTGACTGCACAGGC...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR TCA 90 bp AGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGGCCTGTGCAGTCAGGTaGTGCCTCTATGTTTTTGGA +
Preference number: 2 (lower is better)
Translates to: RNTRRNGIWTGTEMSTTAACAVR*CLYVFG
Trigger: TCCAAAAACATAGAGGCATCACCTGACTGCACAGGC...CGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp AGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGCCAATACCACAGGTCTaGTGGAAATCACCCACATGG +
Preference number: 2 (lower is better)
Translates to: RNTRRNGIWTGTEMSTTAPIPQV*WKSPTW
Trigger: CCATGTGGGTGATTTCCAGCAGACCTGTGGTATTGG...CGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTCCAATACCACAGGTCTaGTGGAAATCACCCACATGG +
Preference number: 2 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFPIPQV*WKSPTW
Trigger: CCATGTGGGTGATTTCCAGCAGACCTGTGGTATTGG...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTCTTTCTCAGGCCTCCTaGCCAATACCACAGGTCTGC +
Preference number: 2 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTLSQAS*PIPQVC
Trigger: GCAGACCTGTGGTATTGGCCAGGAGGCCTGAGAAAG...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR TCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTCAGAATCTGTCATGTTaGCTGAGAGTGCGTGCTTGC +
Preference number: 2 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCQNLSC*LRVRAC
Trigger: GCAAGCACGCACTCTCAGTCAACATGACAGATTCTG...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR TCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGATTTTGTGCAGCTGGTaGGGTATAATCCAAAGCAAA +
Preference number: 2 (lower is better)
Translates to: EGFSFTLATERLLTPPLLILCSW*GIIQSK
Trigger: TTTGCTTTGGATTATACCTCACCAGCTGCACAAAAT...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR TCA 90 bp AGGGAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATCTGGTGATTGATAGTTaGAATCTGTCAACTACTTGT +
Preference number: 2 (lower is better)
Translates to: REPWPVWGIETNVGAFRDLVIDS*NLSTTC
Trigger: ACAAGTAGTTGACAGATTTCAACTATCAATCACCAG...ATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
3UTR-3UTR GCA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACGTTTTTCATTGCCTGTaGAGTCAGGTGATGCCTCTA +
Preference number: 2 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHVFHCL*SQVMPL
Trigger: TAGAGGCATCACCTGACTGCACAGGCAATGAAAAAC...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp GAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTATCTCTGCTCCTGCTaGTTATCCTCCAGAATCTGT +
Preference number: 2 (lower is better)
Translates to: EMSTTARDFLLHWPQSVYYLCSC*LSSRIC
Trigger: ACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATA...ATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCTATCTCTGCTCCTGCTaGTTATCCTCCAGAATCTGT +
Preference number: 2 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLYLCSC*LSSRIC
Trigger: ACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATA...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR CAA 90 bp TTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATaGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCTC +
Preference number: 2 (lower is better)
Translates to: FIVLGKCHLFCATDS*SNVSALFSASPRCL
Trigger: GAGGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR TCA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTCTCTTTTGTGCTACTaGCTCATTGTCAAACGTCTC +
Preference number: 2 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHSLLCY*LIVKRL
Trigger: GAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGA...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGGTTTTTCATTGCCTGTaGAGTCAGGTGATGCCTCTA +
Preference number: 2 (lower is better)
Translates to: GKCHLFCATDSLSNVSALVFHCL*SQVMPL
Trigger: TAGAGGCATCACCTGACTGCACAGGCAATGAAAAAC...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCAGTTATCTCTGCTCCTaGTGGTTATCCTCCAGAATC +
Preference number: 2 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRSYLCS*WLSSRI
Trigger: GATTCTGGAGGATAACCAGCAGGAGCAGAGATAACT...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCATGCCTCTATGTTTTTaGAGGTCCACCTCTGTTGTT +
Preference number: 2 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLMPLCF*RSTSVV
Trigger: AACAACAGAGGTGGACCTCCAAAAACATAGAGGCAT...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTATACCACAGGTCTGCTaGAAATCACCCACATGGTTT +
Preference number: 2 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFIPQVC*KSPTWF
Trigger: AAACCATGTGGGTGATTTCCAGCAGACCTGTGGTAT...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp AGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTTTTAGTCAATCTACAACCGTTCTTCATACCAACTaGTGGTCATTGGCTGGGGTT +
Preference number: 2 (lower is better)
Translates to: RLTCSPLKYGRLFSQSTTVLHTN*WSLAGV
Trigger: AACCCCAGCCAATGACCAGCAGTTGGTATGAAGAAC...GGTTGTAGATTGACTAAAAAGTCTACCATACTTCAAGGGACTACAGGTAAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359930.8
3UTR-3UTR CCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGATGCCTCTATGTTTTTaGAGGTCCACCTCTGTTGTT +
Preference number: 2 (lower is better)
Translates to: GKCHLFCATDSLSNVSALMPLCF*RSTSVV
Trigger: AACAACAGAGGTGGACCTCCAAAAACATAGAGGCAT...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR GCA 90 bp TCAGTTCTGGGACATAACAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAAAGTTATCTCTGCTCCTaGTGGTTATCCTCCAGAATC +
Preference number: 2 (lower is better)
Translates to: SVLGHNKEILGEMVSGQESYLCS*WLSSRI
Trigger: GATTCTGGAGGATAACCAGCAGGAGCAGAGATAACT...TTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTGTTATGTCCCAGAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAATATCTCTGCTCCTGCTaGTTATCCTCCAGAATCTGT +
Preference number: 2 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKYLCSC*LSSRIC
Trigger: ACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATA...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTAATGACTTTCGCCCTTaGGAGAAATTTCCAAGGAAA +
Preference number: 2 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCNDFRP*EKFPRK
Trigger: TTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATT...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR CAA 90 bp ATGAAGTACCAAAGCTGGTATACTATGAGACTTACCTGTAGTCCCTaGAAGTATGGTAGACTTTTTAGTCAATCTACAACCATCTACTCC +
Preference number: 2 (lower is better)
Translates to: MKYQSWYTMRLTCSP*KYGRLFSQSTTIYS
Trigger: GGAGTAGATGGTTGTAGATTGACTAAAAAGTCTACCATACTTCAAGGGACTACAGGTAAGTCTCATAGTATACCAGCTTTGGTACTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359930.8
3UTR-3UTR TCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAATTTTGTGCAGCTGGTaGGGTATAATCCAAAGCAAA +
Preference number: 2 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSILCSW*GIIQSK
Trigger: TTTGCTTTGGATTATACCTCACCAGCTGCACAAAAT...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAAATGCCTCTATGTTTTTaGAGGTCCACCTCTGTTGTT +
Preference number: 2 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKMPLCF*RSTSVV
Trigger: AACAACAGAGGTGGACCTCCAAAAACATAGAGGCAT...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CCA 90 bp ACAAATGTGGGTGCTTTTAGGGATTATCTCCGTCATCTGTTAAATGAGAAATGGATGAAGTACCAAAGCTaGTATACTATGAGACTTACC +
Preference number: 2 (lower is better)
Translates to: TNVGAFRDYLRHLLNEKWMKYQS*YTMRLT
Trigger: GGTAAGTCTCATAGTATACCAGCTTTGGTACTTCAT...CCATTTCTCATTTAACAGATGACGGAGATAATCCCTAAAAGCACCCACATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359930.8
3UTR-3UTR CAA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTACTGAGAGTGCGTGCTaGCTTTCTCAGGCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVTESAC*LSQASW
Trigger: CCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGT...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR TCA 72 bp TCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTaGGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCC +
Preference number: 3 (lower is better)
Translates to: SCWLSSRICHVD*ECVLAFSGLLA
Trigger: GGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR TCA 72 bp CTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTaGCTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: LLLLVILQNLSC*LRVRACFLRPP
Trigger: AGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR GCA 72 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTaGTTGCTTTCTCAGGCCTCCTGGCCAATACCACAG +
Preference number: 3 (lower is better)
Translates to: YPPESVMLTESA*LLSQASWPIPQ
Trigger: CTGTGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR CCA 72 bp CTTTCTCAGGCCTCCTGGCCAATACCACAGGTCTGCTaGAAATCACCCACATGGTTTTTCATTGCCTGTGCA +
Preference number: 3 (lower is better)
Translates to: LSQASWPIPQVC*KSPTWFFIACA
Trigger: TGCACAGGCAATGAAAAACCATGTGGGTGATTTCCAGCAGACCTGTGGTATTGGCCAGGAGGCCTGAGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CAA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCCCAGAATCTGTCATGTaGACTGAGAGTGCGTGCTTG +
Preference number: 3 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAPESVM*TESACL
Trigger: CAAGCACGCACTCTCAGTCAACATGACAGATTCTGG...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CAA 90 bp GCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCCAGAATCTGTCATGTaGACTGAGAGTGCGTGCTTG +
Preference number: 3 (lower is better)
Translates to: ATDSLSNVSALFSASPRCPESVM*TESACL
Trigger: CAAGCACGCACTCTCAGTCAACATGACAGATTCTGG...GCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CAA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGCCAGAATCTGTCATGTaGACTGAGAGTGCGTGCTTG +
Preference number: 3 (lower is better)
Translates to: EGFSFTLATERLLTPPLLPESVM*TESACL
Trigger: CAAGCACGCACTCTCAGTCAACATGACAGATTCTGG...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR TCA 72 bp TCACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTaGTGCCTCTATGTTTTTGGAGGTCCACCTCTGTTG +
Preference number: 3 (lower is better)
Translates to: SPTWFFIACAVR*CLYVFGGPPLL
Trigger: CAACAGAGGTGGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR GCA 72 bp CTGCTGGAAATCACCCACATGGTTTTTCATTGCCTGTaGAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCC +
Preference number: 3 (lower is better)
Translates to: LLEITHMVFHCL*SQVMPLCFWRS
Trigger: GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTGATTTCCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CAA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTGATGCCTCTATGTTTTaGGAGGTCCACCTCTGTTGT +
Preference number: 3 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLDASMF*EVHLCC
Trigger: ACAACAGAGGTGGACCTCCAAAAACATAGAGGCATC...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CAA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGGATGCCTCTATGTTTTaGGAGGTCCACCTCTGTTGT +
Preference number: 3 (lower is better)
Translates to: EGFSFTLATERLLTPPLLDASMF*EVHLCC
Trigger: ACAACAGAGGTGGACCTCCAAAAACATAGAGGCATC...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CAA 90 bp GAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATTATGCCACAGAGCGTTTATaGACACCACCACTCCTGAAA +
Preference number: 3 (lower is better)
Translates to: EPWPVWGIETNVGAFRDYATERL*TPPLLK
Trigger: TTTCAGGAGTGGTGGTGTCAATAAACGCTCTGTGGC...ATAATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
3UTR-3UTR CAA 90 bp TCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTGTACCAGAATCTGTCATGTaGACTGAGAGTGCGTGCTTG +
Preference number: 3 (lower is better)
Translates to: SKVLHTNCWSLAGVLNTVPESVM*TESACL
Trigger: CAAGCACGCACTCTCAGTCAACATGACAGATTCTGG...TACAGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
3UTR GCA 72 bp ACAGGTCTGCTGGAAATCACCCACATGGTTTTTCATTaGCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGG +
Preference number: 3 (lower is better)
Translates to: TGLLEITHMVFH*LCSQVMPLCFW
Trigger: CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTGATTTCCAGCAGACCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR GCA 72 bp AAATGGTATCTGGACAGGAACAGAAATGTCCACAACTaGGAGGGATTTTCTTTTACACTGGCCACAGAGCGT +
Preference number: 3 (lower is better)
Translates to: KWYLDRNRNVHN*EGFSFTLATER
Trigger: ACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CAA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTGATGCCTCTATGTTTTaGGAGGTCCACCTCTGTTGT +
Preference number: 3 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPDASMF*EVHLCC
Trigger: ACAACAGAGGTGGACCTCCAAAAACATAGAGGCATC...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR-3UTR CAA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGATGCCTCTATGTTTTaGGAGGTCCACCTCTGTTGT +
Preference number: 3 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTDASMF*EVHLCC
Trigger: ACAACAGAGGTGGACCTCCAAAAACATAGAGGCATC...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
3UTR TCA 72 bp TTAAATGAGAAATGGGTTGGACTGGTGATTGATAGTTaGAATCTGTCAACTACTTGTATCAGGTTAGACTAC +
Preference number: 3 (lower is better)
Translates to: LNEKWVGLVIDS*NLSTTCIRLDY
Trigger: GTAGTCTAACCTGATACAAGTAGTTGACAGATTTCAACTATCAATCACCAGTCCAACCCATTTCTCATTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGATGTTCCGCGGGGAGTaGGACAGCCCCGGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRMFRGE*DSPGRA
Trigger: CGCCCGGCCGGGGCTGTCGCACTCCCCGCGGAACAT...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTTGGAGAGGGCTCTGCTaGCGCCCAGCCGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSWRGLC*RPAAWG
Trigger: GCCCCATGCGGCTGGGCGGCAGCAGAGCCCTCTCCA...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGCTCTCGACCTCCCGATaGCTCCGGACTCGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRLSTSR*LRTRLA
Trigger: GGCCAGCCGAGTCCGGAGGCATCGGGAGGTCGAGAG...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTAAGTGCGCCCCGCCCTaGTCCATGATGCGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSKCAPP*SMMRRV
Trigger: GACCCGGCGCATCATGGAGCAGGGCGGGGCGCACTT...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCAAAGTGCGCCCCGCCCTaGTCCATGATGCGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPKCAPP*SMMRRV
Trigger: GACCCGGCGCATCATGGAGCAGGGCGGGGCGCACTT...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCCTCCGGACGGGGCAGTaGACGCAGAGCTGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQALRTGQ*TQSWGP
Trigger: GGGACCCCAGCTCTGCGTTCACTGCCCCGTCCGGAG...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCCCCCGCTGTCACAGGTaGAGGCCTCGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQAPRCHR*RPRCPA
Trigger: GGCAGGGCAGCGAGGCCTGCACCTGTGACAGCGGGG...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGACACACATTTGCCATTaGAGAGGCCGGCGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRTHICH*RGRRRP
Trigger: CGGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGT...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGAATCCTCAGGGCCGTaGGGGGCTGCATGGCTGATG +
Preference number: 4 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRESSGP*GAAWLM
Trigger: CATCAGCCATGCAGCCCCCCACGGCCCTGAGGATTC...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGTGCCGTCCACCTCGATaGCCACTGAGCGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRCRPPR*PLSGWS
Trigger: GCTCCATCCGCTCAGTGGCCATCGAGGTGGACGGCA...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTTTCCTGCGGTCCCTCTaGAACCTGCCTTTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSFLRSL*NLPFRR
Trigger: CCGCCTGAAAGGCAGGTTTCAGAGGGACCGCAGGAA...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGCCGTCAGCACCAGGATaGTGTTGGGGCGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRPSAPG*CWGGCS
Trigger: GGAACATCCGCCCCAACATCATCCTGGTGCTGACGG...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCGGCGTCCGGCCAGGCTaGGCTTGTAGTCCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAGVRPG*ACSPRC
Trigger: ACAGCGGGGACTACAAGCTCAGCCTGGCCGGACGCC...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCGGCGTCCGGCCAGGCTaGGCTTGTAGTCCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQAGVRPG*ACSPRC
Trigger: ACAGCGGGGACTACAAGCTCAGCCTGGCCGGACGCC...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGGCCAGTGCCGCTTGGTaGGGTTTCGGGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: EGFSFTLATERLLTPPLLASAAW*GFGAGR
Trigger: CCGCCCAGCCCCGAAACCTCACCAAGCGGCACTGGC...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCAAACCGAGCTGCCTGTaGGCGCCCGAGAACTCCCCG +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACKPSCL*APENSP
Trigger: CGGGGAGTTCTCGGGCGCGCACAGGCAGCTCGGTTT...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCATGTTCCGCGGGGAGTaGGACAGCCCCGGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSMFRGE*DSPGRA
Trigger: CGCCCGGCCGGGGCTGTCGCACTCCCCGCGGAACAT...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCGGGGCCCCTGGCCAGTaGCGCTTGGTGAGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAGAPGQ*RLVRFR
Trigger: CCGAAACCTCACCAAGCGGCACTGGCCAGGGGCCCC...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCAGGCGCCGTCTGCCAGTaGTGGTTGTCGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPGAVCQ*WLSWVK
Trigger: CTTCACCCACGACAACCAGCACTGGCAGACGGCGCC...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCACTGCCTTTCAGGCGGTaGTGCGACAGGAAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPLPFRR*CDRKAE
Trigger: CTCGGCCTTCCTGTCGCACCACCGCCTGAAAGGCAG...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCACCCAGCTCCACATCCTaGTCGTCCGTCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPPSSTS*SSVSTR
Trigger: CCTGGTGCTGACGGACGACCAGGATGTGGAGCTGGG...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGCCGGCTTCCACGTTaGGGCCCCTCACGTAGAACG +
Preference number: 4 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVSRLPR*GPSRRT
Trigger: CGTTCTACGTGAGGGGCCCCAACGTGGAAGCCGGCT...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCAACTTGGGCACGAGGTTaGAGAGGGCTCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPTWARG*RGLCCR
Trigger: GCGGCAGCAGAGCCCTCTCCAACCTCGTGCCCAAGT...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGTGGCCACTGAGCGGATaGAGCGACTGCGGACATAGC +
Preference number: 4 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRWPLSG*SDCGHS
Trigger: GCTATGTCCGCAGTCGCTCCATCCGCTCAGTGGCCA...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCGTCCTCAGGGGCCCCTaGCCAGTGCCGCTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAVLRGP*PVPLGE
Trigger: CTCACCAAGCGGCACTGGCCAGGGGCCCCTGAGGAC...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTGGACGTACTTGCCAGTaGGGATGGAGGAGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVGRTCQ*GWRSVR
Trigger: CCTCACGCTCCTCCATCCTCACTGGCAAGTACGTCC...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCATGTTCCGCGGGGAGTaGGACAGCCCCGGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLMFRGE*DSPGRA
Trigger: CGCCCGGCCGGGGCTGTCGCACTCCCCGCGGAACAT...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCATGGGGCGGATGTTCCTaGGGTCCCTCTGAAACCTGC +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPWGGCS*GPSETC
Trigger: GCAGGTTTCAGAGGGACCGCAGGAACATCCGCCCCA...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATTATCCCCGCTGTCACAGGTaGAGGCCTCGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: EPWPVWGIETNVGAFRDYPRCHR*RPRCPA
Trigger: GGCAGGGCAGCGAGGCCTGCACCTGTGACAGCGGGG...ATAATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGCTGAGAGTGCGTGCTTaGTTTCTCAGGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRLRVRA*FLRPPG
Trigger: GCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAG...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTCTGAGAGTGCGTGCTTaGTTTCTCAGGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSLRVRA*FLRPPG
Trigger: GCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAG...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCAGATTCGCCCAGGAGCTaGAAACGAGGGAGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPDSPRS*KRGREA
Trigger: CGCTTCCCTCCCTCGTTTCCAGCTCCTGGGCGAATC...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCACTTGGGCACGAGGTTaGAGAGGGCTCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACTWARG*RGLCCR
Trigger: GCGGCAGCAGAGCCCTCTCCAACCTCGTGCCCAAGT...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTTGGCCACTGAGCGGATaGAGCGACTGCGGACATAGC +
Preference number: 4 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVWPLSG*SDCGHS
Trigger: GCTATGTCCGCAGTCGCTCCATCCGCTCAGTGGCCA...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGGGCCAGGTCAATGTTaGGGACGATGTGGGGATTCA +
Preference number: 4 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRGPGQC*GRCGDS
Trigger: TGAATCCCCACATCGTCCTCAACATTGACCTGGCCC...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGCAGGGCAAACCGAGCTaGCTGTGCGCGCCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: EGFSFTLATERLLTPPLLQGKPS*LCAPEN
Trigger: GTTCTCGGGCGCGCACAGGCAGCTCGGTTTGCCCTG...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTCTGCAAACACTCGACTaGCTTTGCCGAAAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSLQTLD*LCRKPR
Trigger: GCGAGGCTTTCGGCAAAGGCAGTCGAGTGTTTGCAG...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCACACACTCTCGCTCCTaGTCGCCCTCGGCGGAGAGT +
Preference number: 4 (lower is better)
Translates to: ATDSLSNVSALFSASPRCTHSRS*SPSAES
Trigger: ACTCTCCGCCGAGGGCGAGCAGGAGCGAGAGTGTGT...GCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGCGGCTCTCGTGCTGTaGCTGCCAGGAGGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLAALVL*LPGGRG
Trigger: TCCTCGCCCTCCTGGCAGGCACAGCACGAGAGCCGC...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGGCGGCTCTCGTGCTGTaGCTGCCAGGAGGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWAALVL*LPGGRG
Trigger: TCCTCGCCCTCCTGGCAGGCACAGCACGAGAGCCGC...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCACCGACATGAGGGTCTaGAAGCGCTTCCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACTDMRV*KRFRWS
Trigger: GCTCCAGCGGAAGCGCTTGCAGACCCTCATGTCGGT...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCGGTTGGAGAGGGCTCTaGTGCCGCCCAGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSGWRGL*CRPAAW
Trigger: CCATGCGGCTGGGCGGCAGCAGAGCCCTCTCCAACC...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCCTACGTGGTACACCCTaGCGTCCACCTCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACLRGTP*RPPRWP
Trigger: TGGCCATCGAGGTGGACGGCAGGGTGTACCACGTAG...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGCACGTGTCGTTGTTCTaGAGGCGCTTGAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRHVSLF*RRLSSL
Trigger: CAAGCTGCTCAAGCGCCTGCAGAACAACGACACGTG...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCGGCGCCGTCTGCCAGTaGTGGTTGTCGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAGAVCQ*WLSWVK
Trigger: CTTCACCCACGACAACCAGCACTGGCAGACGGCGCC...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCGAATCCTCAGGGCCGTaGGGGGCTGCATGGCTGATG +
Preference number: 4 (lower is better)
Translates to: ATDSLSNVSALFSASPRCESSGP*GAAWLM
Trigger: CATCAGCCATGCAGCCCCCCACGGCCCTGAGGATTC...GCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTCTGCAATGTCCAGGATaGTGGGGGCCAGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSLQCPG*WGPGQC
Trigger: ACATTGACCTGGCCCCCACCATCCTGGACATTGCAG...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTGAAGCACGTGAGGCCTaGCATGCTGCACGTGTCGTT +
Preference number: 4 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVEAREA*HAARVV
Trigger: AACGACACGTGCAGCATGCCAGGCCTCACGTGCTTC...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCACAGTGCTGGTTGTCGTaGGTGAAGCACGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPQCWLS*VKHVRP
Trigger: AGGCCTCACGTGCTTCACCCACGACAACCAGCACTG...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp GCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCGCCCCGTGTAGCGCATaGTCCAGTGTTTGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: ATDSLSNVSALFSASPRCAPCSA*SSVCPG
Trigger: ACCCGGACAAACACTGGATCATGCGCTACACGGGGC...GCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGGCGTCCGGCCAGGCTaGGCTTGTAGTCCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLGVRPG*ACSPRC
Trigger: ACAGCGGGGACTACAAGCTCAGCCTGGCCGGACGCC...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGCACCTCGATGGCCACTaGGCGGATGGAGCGACTGCG +
Preference number: 4 (lower is better)
Translates to: EVISAPAGYPPESVMLTEHLDGH*ADGATA
Trigger: CGCAGTCGCTCCATCCGCTCAGTGGCCATCGAGGTG...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTGCCAGTGCCGCTTGGTaGGGTTTCGGGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPASAAW*GFGAGR
Trigger: CCGCCCAGCCCCGAAACCTCACCAAGCGGCACTGGC...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTGGCCACTTTCGACGCTaGAACTGCCTGTATTGCTCA +
Preference number: 4 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSGHFRR*NCLYCS
Trigger: TGAGCAATACAGGCAGTTTCAGCGTCGAAAGTGGCC...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCACACTCGACTGCCTTTaGCGAAAGCCTCGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVATLDCL*RKPRAR
Trigger: GCGAGCGCGAGGCTTTCGGCAAAGGCAGTCGAGTGT...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCGGACTCGCCCCGGTCTaGAAACACTCGACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACGLAPV*KHSTAF
Trigger: AAAGGCAGTCGAGTGTTTGCAGACCGGGGCGAGTCC...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCAAGTGCGCCCCGCCCTaGTCCATGATGCGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLKCAPP*SMMRRV
Trigger: GACCCGGCGCATCATGGAGCAGGGCGGGGCGCACTT...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGCTCTCGTGCTGTGCCTaGCAGGAGGGCGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLLSCCA*QEGEEQ
Trigger: CTGCTCCTCGCCCTCCTGGCAGGCACAGCACGAGAG...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp ATGTCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTGCGGCTCTCGTGCTGTaGCTGCCAGGAGGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: MSKVLHTNCWSLAGVLNTAALVL*LPGGRG
Trigger: TCCTCGCCCTCCTGGCAGGCACAGCACGAGAGCCGC...AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp GAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATTATAAGGTGCGGCTCTCGTaGTGTGCCTGCCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: EPWPVWGIETNVGAFRDYKVRLS*CACQEG
Trigger: GCCCTCCTGGCAGGCACAGCACGAGAGCCGCACCTT...ATAATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGAAGGTGCGGCTCTCGTaGTGTGCCTGCCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLKVRLS*CACQEG
Trigger: GCCCTCCTGGCAGGCACAGCACGAGAGCCGCACCTT...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCGCGTCCTCCACACACTaGCACTTCTGTCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAASSTH*HFCPSC
Trigger: GCAGCTGGGACAGAAGTGGCAGTGTGTGGAGGACGC...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCAGGTTGGAGAGGGCTCTaGTGCCGCCCAGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPGWRGL*CRPAAW
Trigger: CCATGCGGCTGGGCGGCAGCAGAGCCCTCTCCAACC...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGAGGTGCAGGCCTCGCTaGCCTGCCCGTAGTACTTGG +
Preference number: 4 (lower is better)
Translates to: EGFSFTLATERLLTPPLLRCRPR*PARSTW
Trigger: CCAAGTACTACGGGCAGGGCAGCGAGGCCTGCACCT...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp TCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTGTAGGGGCCCCTGGCCAGTaGCGCTTGGTGAGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: SKVLHTNCWSLAGVLNTVGAPGQ*RLVRFR
Trigger: CCGAAACCTCACCAAGCGGCACTGGCCAGGGGCCCC...TACAGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCATTCTTCTTGCGCTTCTaGTCCCGCAACAGCCACACC +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPFFLRF*SRNSHT
Trigger: GGTGTGGCTGTTGCGGGAGCAGAAGCGCAAGAAGAA...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTCCCAGCTCCACATCCTaGTCGTCCGTCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: CATDSLSNVSALFSASPRPSSTS*SSVSTR
Trigger: CCTGGTGCTGACGGACGACCAGGATGTGGAGCTGGG...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCCTCCTTCCAGCCGGGTaGCACGTAGGAGCCGTTGTA +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVALLPAG*HVGAVV
Trigger: TACAACGGCTCCTACGTGCCACCCGGCTGGAAGGAG...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCCTCCTTCCAGCCGGGTaGCACGTAGGAGCCGTTGTA +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQALLPAG*HVGAVV
Trigger: TACAACGGCTCCTACGTGCCACCCGGCTGGAAGGAG...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGATGACCATGAGGACTaGCCTGTGCGGGTACATCTT +
Preference number: 4 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRDDHED*PVRVHL
Trigger: AAGATGTACCCGCACAGGCCAGTCCTCATGGTCATC...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCGCCCAGCCGCATaGGGCCCTTGCACTTATGCA +
Preference number: 4 (lower is better)
Translates to: CATDSLSNVSALFSASPRCRPAA*GPCTYA
Trigger: TGCATAAGTGCAAGGGCCCCATGCGGCTGGGCGGCA...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCACTTTCTCAGGCCTCCTaGCCAATACCACAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPLSQAS*PIPQVC
Trigger: GCAGACCTGTGGTATTGGCCAGGAGGCCTGAGAAAG...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR CAA 72 bp CCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTaGCTTTCTCAGGCCTCCTGGCCAATACCACAGGTC +
Preference number: 4 (lower is better)
Translates to: PPESVMLTESAC*LSQASWPIPQV
Trigger: GACCTGTGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCCCCTCGGCGGAGAGTTaGAACAGATGTGGGATTCGC +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQAPSAES*NRCGIR
Trigger: GCGAATCCCACATCTGTTTCAACTCTCCGCCGAGGG...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTTCCTGCGGTCCCTCTaGAACCTGCCTTTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLFLRSL*NLPFRR
Trigger: CCGCCTGAAAGGCAGGTTTCAGAGGGACCGCAGGAA...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACCCCGCCCTGCTCCATaGTGCGCCGGGTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPPRPAP*CAGSCS
Trigger: TGAACAAGACCCGGCGCATCATGGAGCAGGGCGGGG...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp AATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGCCCCGCCCTGCTCCATaGTGCGCCGGGTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: NVHNCEGFSFTLATERLLPRPAP*CAGSCS
Trigger: TGAACAAGACCCGGCGCATCATGGAGCAGGGCGGGG...CAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR TCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCCTCGGCGTGATGTGCTaGGATGCGTTTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVALGVMC*DAFGKR
Trigger: CCTCTTCCCAAACGCATCTCAGCACATCACGCCGAG...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTAGTCGTCCACCGACATaGGGGTCTGCAAGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLSRPPT*GSASAS
Trigger: GGAAGCGCTTGCAGACCCTCATGTCGGTGGACGACT...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCTGGTACTCAGCACGCTaGCACAGGTCCTTCACACGC +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAWYSAR*HRSFTR
Trigger: GCGTGTGAAGGACCTGTGTCAGCGTGCTGAGTACCA...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp AATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGAAACCGAGCTGCCTGTaGGCGCCCGAGAACTCCCCG +
Preference number: 4 (lower is better)
Translates to: NVHNCEGFSFTLATERLLKPSCL*APENSP
Trigger: CGGGGAGTTCTCGGGCGCGCACAGGCAGCTCGGTTT...CAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp ATGTCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTCAGGGCAAACCGAGCTaGCTGTGCGCGCCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: MSKVLHTNCWSLAGVLNTQGKPS*LCAPEN
Trigger: GTTCTCGGGCGCGCACAGGCAGCTCGGTTTGCCCTG...AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTACACTCGACTGCCTTTaGCGAAAGCCTCGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLTLDCL*RKPRAR
Trigger: GCGAGCGCGAGGCTTTCGGCAAAGGCAGTCGAGTGT...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCGGACTCGCCCCGGTCTaGAAACACTCGACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQAGLAPV*KHSTAF
Trigger: AAAGGCAGTCGAGTGTTTGCAGACCGGGGCGAGTCC...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGCCAGAGCCTTGTGTaGACGTGTGTGTGCGTAACA +
Preference number: 4 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVSQSLV*TCVCVT
Trigger: TGTTACGCACACACACGTGCACACAAGGCTCTGGCT...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATTATACACACTCTCGCTCCTaGTCGCCCTCGGCGGAGAGT +
Preference number: 4 (lower is better)
Translates to: EPWPVWGIETNVGAFRDYTHSRS*SPSAES
Trigger: ACTCTCCGCCGAGGGCGAGCAGGAGCGAGAGTGTGT...ATAATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTGGTCCCTCTGAAACCTaGCTTTCAGGCGGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLGPSET*LSGGGA
Trigger: CGCACCACCGCCTGAAAGGCAGGTTTCAGAGGGACC...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATCTCTCGTGCTGTGCCTaGCAGGAGGGCGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: EMSTTARDFLLHWPQSVYLSCCA*QEGEEQ
Trigger: CTGCTCCTCGCCCTCCTGGCAGGCACAGCACGAGAG...ATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCAAGGTGCGGCTCTCGTaGTGTGCCTGCCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLKVRLS*CACQEG
Trigger: GCCCTCCTGGCAGGCACAGCACGAGAGCCGCACCTT...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCCACTTCTGTCCCAGCTaGTCACACGCCGTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQAHFCPS*SHAVWY
Trigger: GTACCAGACGGCGTGTGAGCAGCTGGGACAGAAGTG...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTGGAGAGGGCTCTGCTaGCGCCCAGCCGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCWRGLC*RPAAWG
Trigger: GCCCCATGCGGCTGGGCGGCAGCAGAGCCCTCTCCA...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGAGGTGCAGGCCTCGCTaGCCTGCCCGTAGTACTTGG +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLRCRPR*PARSTW
Trigger: CCAAGTACTACGGGCAGGGCAGCGAGGCCTGCACCT...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCAGACTGGAGCCTCTGTaGTTGAGGCGGCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQARLEPL*LRRPLC
Trigger: GCACAAAGGCCGCCTCAAGCACAGAGGCTCCAGTCT...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATTATGGCGCCGTCTGCCAGTaGTGGTTGTCGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: EPWPVWGIETNVGAFRDYGAVCQ*WLSWVK
Trigger: CTTCACCCACGACAACCAGCACTGGCAGACGGCGCC...ATAATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTCAGAAAGGCGCCGTCTaGCAGTGCTGGTTGTCGTGG +
Preference number: 4 (lower is better)
Translates to: CATDSLSNVSALFSASPRQKGAV*QCWLSW
Trigger: CCACGACAACCAGCACTGGCAGACGGCGCCTTTCTG...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGCCAATACCACAGGTCTaGTGGAAATCACCCACATGG +
Preference number: 4 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRPIPQV*WKSPTW
Trigger: CCATGTGGGTGATTTCCAGCAGACCTGTGGTATTGG...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGGATTCGCCCAGGAGCTaGAAACGAGGGAGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: EGFSFTLATERLLTPPLLDSPRS*KRGREA
Trigger: CGCTTCCCTCCCTCGTTTCCAGCTCCTGGGCGAATC...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGCTGCCTTTCAGGCGGTaGTGCGACAGGAAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: EVISAPAGYPPESVMLTELPFRR*CDRKAE
Trigger: CTCGGCCTTCCTGTCGCACCACCGCCTGAAAGGCAG...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGGAATCCTCAGGGCCGTaGGGGGCTGCATGGCTGATG +
Preference number: 4 (lower is better)
Translates to: EVISAPAGYPPESVMLTEESSGP*GAAWLM
Trigger: CATCAGCCATGCAGCCCCCCACGGCCCTGAGGATTC...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCATTGGTGAATTCCATGTaGATGGGCTTCATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPLVNSM*MGFMGP
Trigger: GGGGCCCATGAAGCCCATCCACATGGAATTCACCAA...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGCCGGCTTCCACGTTaGGGCCCCTCACGTAGAACG +
Preference number: 4 (lower is better)
Translates to: EVISAPAGYPPESVMLTESRLPR*GPSRRT
Trigger: CGTTCTACGTGAGGGGCCCCAACGTGGAAGCCGGCT...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCAATGTTGAGGACGATGTaGGGATTCAGACAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPMLRTM*GFRQPA
Trigger: AGCCGGCTGTCTGAATCCCCACATCGTCCTCAACAT...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTTCACACGCTGGTACTTaGGCAGAAAGTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSSHAGT*AESSPP
Trigger: AGGAGGAGAACTTTCTGCCCAAGTACCAGCGTGTGA...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGCTTCAGCTTCCCCGTaGCGTCCTCCACACACTGCC +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLASASP*RPPHTA
Trigger: GGCAGTGTGTGGAGGACGCCACGGGGAAGCTGAAGC...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCACTTGGGCACGAGGTTaGAGAGGGCTCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSTWARG*RGLCCR
Trigger: GCGGCAGCAGAGCCCTCTCCAACCTCGTGCCCAAGT...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGGCCACTGAGCGGATaGAGCGACTGCGGACATAGC +
Preference number: 4 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLWPLSG*SDCGHS
Trigger: GCTATGTCCGCAGTCGCTCCATCCGCTCAGTGGCCA...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCTCACCCAGGCCTACGTaGTACACCCTGCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSSPRPT*YTLPST
Trigger: GGTGGACGGCAGGGTGTACCACGTAGGCCTGGGTGA...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGGTCCTCAGGGGCCCCTaGCCAGTGCCGCTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GKCHLFCATDSLSNVSALVLRGP*PVPLGE
Trigger: CTCACCAAGCGGCACTGGCCAGGGGCCCCTGAGGAC...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp GAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATTATTTCCTGCGGTCCCTCTaGAACCTGCCTTTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: EPWPVWGIETNVGAFRDYFLRSL*NLPFRR
Trigger: CCGCCTGAAAGGCAGGTTTCAGAGGGACCGCAGGAA...ATAATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR TCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCCCCCGCCCTGCTCCATaGTGCGCCGGGTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRPRPAP*CAGSCS
Trigger: TGAACAAGACCCGGCGCATCATGGAGCAGGGCGGGG...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCGGTAGCCAGTGCTATTaGGGTACACGGCAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQAGSQCY*GTRQRC
Trigger: GCACCTTTGCCGTGTACCTCAATAGCACTGGCTACC...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCGGTAGCCAGTGCTATTaGGGTACACGGCAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAGSQCY*GTRQRC
Trigger: GCACCTTTGCCGTGTACCTCAATAGCACTGGCTACC...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGGCCCCGTGTAGCGCATaGTCCAGTGTTTGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWAPCSA*SSVCPG
Trigger: ACCCGGACAAACACTGGATCATGCGCTACACGGGGC...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGAGTCGTCCACCGACATaGGGGTCTGCAAGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLSRPPT*GSASAS
Trigger: GGAAGCGCTTGCAGACCCTCATGTCGGTGGACGACT...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTATCTTCTTTTTCAAGTaGAACCGATTCACCGGCCGC +
Preference number: 4 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSIFFFK*NRFTGR
Trigger: GCGGCCGGTGAATCGGTTTCACTTGAAAAAGAAGAT...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGCACCTCGATGGCCACTaGGCGGATGGAGCGACTGCG +
Preference number: 4 (lower is better)
Translates to: GKCHLFCATDSLSNVSALHLDGH*ADGATA
Trigger: CGCAGTCGCTCCATCCGCTCAGTGGCCATCGAGGTG...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGGTAGGGGTCTGTGTTaGGATCAAAGTACTCTAGGA +
Preference number: 4 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRGRGLC*DQSTLG
Trigger: TCCTAGAGTACTTTGATCTCAACACAGACCCCTACC...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp GCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCGTACGTGTAGCTGGTTaGGGACATCCCTGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ATDSLSNVSALFSASPRCVRVAG*GHPCPV
Trigger: CACTGGACAGGGATGTCCTCAACCAGCTACACGTAC...GCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTCAGAATCTGTCATGTTaGCTGAGAGTGCGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVQNLSC*LRVRAC
Trigger: GCAAGCACGCACTCTCAGTCAACATGACAGATTCTG...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCCTCCGTTTTCCTTTGTaGGCTTCTGGGGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACLRFPL*ASGGGL
Trigger: TAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAG...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCCCAGCCACACACATTTaGCATTGGAGAGGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSPATHI*HWRGRR
Trigger: GCGCCGGCCTCTCCAATGGCAAATGTGTGTGGCTGG...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTGCGGGAGTCTCAAGTTaGGTCTGTGGCTTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVAGVSS*VCGFVS
Trigger: AGAAACAAAGCCACAGACGCAACTTGAGACTCCCGC...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCCAGGGAGAACACAGTTaGGGACAGCAAGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAQGEHS*GQQAQH
Trigger: GTGCTGTGCTTGCTGTCCGCAACTGTGTTCTCCCTG...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCCCTTTCAGGCGGTGGTaGGACAGGAAGGCCGAGCTT +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSPFRRW*DRKAEL
Trigger: AAGCTCGGCCTTCCTGTCGCACCACCGCCTGAAAGG...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGTGGGGCGGATGTTCCTaGGGTCCCTCTGAAACCTGC +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWWGGCS*GPSETC
Trigger: GCAGGTTTCAGAGGGACCGCAGGAACATCCGCCCCA...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGAAGGCGTTGATGAAGTaGGCCCCGCCCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLKALMK*APPCSM
Trigger: CATGGAGCAGGGCGGGGCGCACTTCATCAACGCCTT...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGGTACACGGCAAAGGTaGGGCTCTCGTGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLGTRQR*GSRAVP
Trigger: AGGCACAGCACGAGAGCCGCACCTTTGCCGTGTACC...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCAACATCTTCTTGGACGTaGGGAAGAAGCTCACGCTGT +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPTSSWT*GRSSRC
Trigger: ACAGCGTGAGCTTCTTCCGCACGTCCAAGAAGATGT...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGGCCGCATGGGGCCCTTaGACTTATGCAGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: EGFSFTLATERLLTPPLLAAWGP*TYAASA
Trigger: AGCTGAAGCTGCATAAGTGCAAGGGCCCCATGCGGC...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp TCAGTTCTGGGACATAACAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAATGGAGAGGGCTCTGCTaGCGCCCAGCCGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: SVLGHNKEILGEMVSGQEWRGLC*RPAAWG
Trigger: GCCCCATGCGGCTGGGCGGCAGCAGAGCCCTCTCCA...TTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTGTTATGTCCCAGAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTAGACTGGAGCCTCTGTaGTTGAGGCGGCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLRLEPL*LRRPLC
Trigger: GCACAAAGGCCGCCTCAAGCACAGAGGCTCCAGTCT...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCTTCTTCTTGCGCTTCTaGTCCCGCAACAGCCACACC +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAFFLRF*SRNSHT
Trigger: GGTGTGGCTGTTGCGGGAGCAGAAGCGCAAGAAGAA...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp AATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGGGCGCCGTCTGCCAGTaGTGGTTGTCGTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: NVHNCEGFSFTLATERLLGAVCQ*WLSWVK
Trigger: CTTCACCCACGACAACCAGCACTGGCAGACGGCGCC...CAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCCAGAAAGGCGCCGTCTaGCAGTGCTGGTTGTCGTGG +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSQKGAV*QCWLSW
Trigger: CCACGACAACCAGCACTGGCAGACGGCGCCTTTCTG...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGATTCGCCCAGGAGCTaGAAACGAGGGAGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLDSPRS*KRGREA
Trigger: CGCTTCCCTCCCTCGTTTCCAGCTCCTGGGCGAATC...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCCTGCAATGTCCAGGATaGTGGGGGCCAGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVALQCPG*WGPGQC
Trigger: ACATTGACCTGGCCCCCACCATCCTGGACATTGCAG...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCAGCTTCAGCTTCCCCGTaGCGTCCTCCACACACTGCC +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPASASP*RPPHTA
Trigger: GGCAGTGTGTGGAGGACGCCACGGGGAAGCTGAAGC...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp AATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGTGCCGCCCAGCCGCATaGGGCCCTTGCACTTATGCA +
Preference number: 4 (lower is better)
Translates to: NVHNCEGFSFTLATERLLCRPAA*GPCTYA
Trigger: TGCATAAGTGCAAGGGCCCCATGCGGCTGGGCGGCA...CAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGCCTGCCCGTAGTACTTaGGCACGAGGTTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLPARST*ARGWRG
Trigger: CCCTCTCCAACCTCGTGCCCAAGTACTACGGGCAGG...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGCCGTCCACCTCGATaGCCACTGAGCGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHCRPPR*PLSGWS
Trigger: GCTCCATCCGCTCAGTGGCCATCGAGGTGGACGGCA...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGGGTTTCAATCTCGTaGTCGATGTGCAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVRVSIS*SMCSLW
Trigger: CCACAAGCTGCACATCGACCACGAGATTGAAACCCT...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCAGCTGTACGTGTAGCTaGTTGAGGACATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACSCTCS*LRTSLS
Trigger: GGACAGGGATGTCCTCAACCAGCTACACGTACAGCT...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACCCGTCAGCACCAGGATaGTGTTGGGGCGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHPSAPG*CWGGCS
Trigger: GGAACATCCGCCCCAACATCATCCTGGTGCTGACGG...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR TCA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACGCCCCGTGTAGCGCATaGTCCAGTGTTTGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHAPCSA*SSVCPG
Trigger: ACCCGGACAAACACTGGATCATGCGCTACACGGGGC...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR TCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTGGGCCAGGTCAATGTTaGGGACGATGTGGGGATTCA +
Preference number: 4 (lower is better)
Translates to: CATDSLSNVSALFSASPRGPGQC*GRCGDS
Trigger: TGAATCCCCACATCGTCCTCAACATTGACCTGGCCC...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGCCGTGTCCAGCAGCTTaGGGATGGATTTCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLPCPAA*GWISRP
Trigger: TGGACGGGAAATCCATCCTCAAGCTGCTGGACACGG...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAAGCCAGTGCCGCTTGGTaGGGTTTCGGGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKASAAW*GFGAGR
Trigger: CCGCCCAGCCCCGAAACCTCACCAAGCGGCACTGGC...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTCGCTTTTTCTTCAGGTaGCCTCGGACTTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: CATDSLSNVSALFSASPRRFFFR*PRTSLR
Trigger: CCTGAGGGAAGTCCGAGGTCACCTGAAGAAAAAGCG...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTCAGAAGAGGAAATTGTaGGTCTCATTGATGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSQKRKL*VSLMVL
Trigger: GAGGACCATCAATGAGACTCACAATTTCCTCTTCTG...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTGGTAGGGGTCTGTGTTaGGATCAAAGTACTCTAGGA +
Preference number: 4 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVGRGLC*DQSTLG
Trigger: TCCTAGAGTACTTTGATCTCAACACAGACCCCTACC...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGGTACGTGTAGCTGGTTaGGGACATCCCTGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: EGFSFTLATERLLTPPLLVRVAG*GHPCPV
Trigger: CACTGGACAGGGATGTCCTCAACCAGCTACACGTAC...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCGGCCACTTTCGACGCTaGAACTGCCTGTATTGCTCA +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQAGHFRR*NCLYCS
Trigger: TGAGCAATACAGGCAGTTTCAGCGTCGAAAGTGGCC...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCGGCCACTTTCGACGCTaGAACTGCCTGTATTGCTCA +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAGHFRR*NCLYCS
Trigger: TGAGCAATACAGGCAGTTTCAGCGTCGAAAGTGGCC...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCGCCTGTGCAGTCAGGTaGTGCCTCTATGTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACACAVR*CLYVFG
Trigger: TCCAAAAACATAGAGGCATCACCTGACTGCACAGGC...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCAGCCAGAGCCTTGTGTaGACGTGTGTGTGCGTAACA +
Preference number: 4 (lower is better)
Translates to: ATDSLSNVSALFSASPRCSQSLV*TCVCVT
Trigger: TGTTACGCACACACACGTGCACACAAGGCTCTGGCT...GCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCACACACTCTCGCTCCTaGTCGCCCTCGGCGGAGAGT +
Preference number: 4 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRTHSRS*SPSAES
Trigger: ACTCTCCGCCGAGGGCGAGCAGGAGCGAGAGTGTGT...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCGTGCTTCTTTTGGGATaGGGGAGTCTCAAGTTGCGT +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACVLLLG*GSLKLR
Trigger: ACGCAACTTGAGACTCCCGCATCCCAAAAGAAGCAC...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTCAGGGAGAACACAGTTaGGGACAGCAAGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: CATDSLSNVSALFSASPRQGEHS*GQQAQH
Trigger: GTGCTGTGCTTGCTGTCCGCAACTGTGTTCTCCCTG...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGGTACACGGCAAAGGTaGGGCTCTCGTGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLGTRQR*GSRAVP
Trigger: AGGCACAGCACGAGAGCCGCACCTTTGCCGTGTACC...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTGTAGGTACACGGCAAAGGTaGGGCTCTCGTGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SKVLHTNCWSLAGVLNTVGTRQR*GSRAVP
Trigger: AGGCACAGCACGAGAGCCGCACCTTTGCCGTGTACC...TACAGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCACCGACATGAGGGTCTaGAAGCGCTTCCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLTDMRV*KRFRWS
Trigger: GCTCCAGCGGAAGCGCTTGCAGACCCTCATGTCGGT...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCGTCCTCCACACACTaGCACTTCTGTCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLASSTH*HFCPSC
Trigger: GCAGCTGGGACAGAAGTGGCAGTGTGTGGAGGACGC...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp ACAAATGTGGGTGCTTTTAGGGATTATCTCCGTCATCTGTTAAATGAGAAATGGGGTTGGAGAGGGCTCTaGTGCCGCCCAGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: TNVGAFRDYLRHLLNEKWGWRGL*CRPAAW
Trigger: CCATGCGGCTGGGCGGCAGCAGAGCCCTCTCCAACC...CCATTTCTCATTTAACAGATGACGGAGATAATCCCTAAAAGCACCCACATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp AATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGCTACGTGGTACACCCTaGCGTCCACCTCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: NVHNCEGFSFTLATERLLLRGTP*RPPRWP
Trigger: TGGCCATCGAGGTGGACGGCAGGGTGTACCACGTAG...CAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAGGGGCCCCTGGCCAGTaGCGCTTGGTGAGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSGAPGQ*RLVRFR
Trigger: CCGAAACCTCACCAAGCGGCACTGGCCAGGGGCCCC...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGTGGTCTTTCCAGGCCTaGAGGGACTTGTACAGGTCC +
Preference number: 4 (lower is better)
Translates to: EGFSFTLATERLLTPPLLWSFQA*RDLYRS
Trigger: GGACCTGTACAAGTCCCTGCAGGCCTGGAAAGACCA...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCAGACTGGAGCCTCTGTaGTTGAGGCGGCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSRLEPL*LRRPLC
Trigger: GCACAAAGGCCGCCTCAAGCACAGAGGCTCCAGTCT...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTTCTTCTTGCGCTTCTaGTCCCGCAACAGCCACACC +
Preference number: 4 (lower is better)
Translates to: CATDSLSNVSALFSASPRFFLRF*SRNSHT
Trigger: GGTGTGGCTGTTGCGGGAGCAGAAGCGCAAGAAGAA...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTGCGGAGTTTCTTCTTaGGCTTCTGCTCCCGCAACA +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQACGVSS*ASAPAT
Trigger: TGTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCA...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACAGAAAGGCGCCGTCTaGCAGTGCTGGTTGTCGTGG +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPQKGAV*QCWLSW
Trigger: CCACGACAACCAGCACTGGCAGACGGCGCCTTTCTG...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTAGTTATCTCTGCTCCTaGTGGTTATCCTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSSYLCS*WLSSRI
Trigger: GATTCTGGAGGATAACCAGCAGGAGCAGAGATAACT...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGATTGTCAAACGTCTCTaGACTGTTTTCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRIVKRL*TVFSLS
Trigger: GGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAAT...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTATTGTCAAACGTCTCTaGACTGTTTTCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSIVKRL*TVFSLS
Trigger: GGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAAT...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTACACACATTTGCCATTaGAGAGGCCGGCGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFTHICH*RGRRRP
Trigger: CGGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGT...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp AGGGAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATTCAGGTCCACTTGGCTaGAAACGACGTGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: REPWPVWGIETNVGAFRDSGPLG*KRRESA
Trigger: GGCAGATTCACGTCGTTTCCAGCCAAGTGGACCTGA...ATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCTCAGGTCCACTTGGCTaGAAACGACGTGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVASGPLG*KRRESA
Trigger: GGCAGATTCACGTCGTTTCCAGCCAAGTGGACCTGA...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCGCGGGTACATCTTCTTaGACGTGCGGAAGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQAAGTSS*TCGRSS
Trigger: TGAGCTTCTTCCGCACGTCCAAGAAGATGTACCCGC...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTCTGCAATGTCCAGGATaGTGGGGGCCAGGTCAATGT +
Preference number: 4 (lower is better)
Translates to: CATDSLSNVSALFSASPRLQCPG*WGPGQC
Trigger: ACATTGACCTGGCCCCCACCATCCTGGACATTGCAG...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCAGAAAGTTCTCCTCCTaGGCGTCCACCTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACRKFSS*ASTLSL
Trigger: CAATGACAAGGTGGACGCCCAGGAGGAGAACTTTCT...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCGCTTCAGCTTCCCCGTaGCGTCCTCCACACACTGCC +
Preference number: 4 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRASASP*RPPHTA
Trigger: GGCAGTGTGTGGAGGACGCCACGGGGAAGCTGAAGC...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTCACCCAGGCCTACGTaGTACACCCTGCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFSPRPT*YTLPST
Trigger: GGTGGACGGCAGGGTGTACCACGTAGGCCTGGGTGA...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAGTCCTCAGGGGCCCCTaGCCAGTGCCGCTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSVLRGP*PVPLGE
Trigger: CTCACCAAGCGGCACTGGCCAGGGGCCCCTGAGGAC...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTACAGTCACATTCTTCTaGCCGCTTTTTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSTVTFF*PLFLQV
Trigger: CACCTGAAGAAAAAGCGGCCAGAAGAATGTGACTGT...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGCAGTGCTGGTTGTCGTaGGTGAAGCACGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: EVISAPAGYPPESVMLTEQCWLS*VKHVRP
Trigger: AGGCCTCACGTGCTTCACCCACGACAACCAGCACTG...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGCAGTGCTGGTTGTCGTaGGTGAAGCACGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLQCWLS*VKHVRP
Trigger: AGGCCTCACGTGCTTCACCCACGACAACCAGCACTG...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTATACCACAGGTCTGCTaGAAATCACCCACATGGTTT +
Preference number: 4 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSIPQVC*KSPTWF
Trigger: AAACCATGTGGGTGATTTCCAGCAGACCTGTGGTAT...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCTCCTTTGTGAGCTTCTaGGGGAGGGTTAGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVASFVSF*GRVSGD
Trigger: GTCACCACTAACCCTCCCCCAGAAGCTCACAAAGGA...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCCCGTCAGCACCAGGATaGTGTTGGGGCGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRPSAPG*CWGGCS
Trigger: GGAACATCCGCCCCAACATCATCCTGGTGCTGACGG...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACCTCGGCGTGATGTGCTaGGATGCGTTTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHLGVMC*DAFGKR
Trigger: CCTCTTCCCAAACGCATCTCAGCACATCACGCCGAG...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR TCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTAGTTGTAGCTCGGCGTaGTGTGCTGAGATGCGTTTG +
Preference number: 4 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLSCSSA*CAEMRL
Trigger: CAAACGCATCTCAGCACATCACGCCGAGCTACAACT...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGAGTCGTCCACCGACATaGGGGTCTGCAAGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: GKCHLFCATDSLSNVSALSRPPT*GSASAS
Trigger: GGAAGCGCTTGCAGACCCTCATGTCGGTGGACGACT...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGGGGCCAGGTCAATGTTaGGGACGATGTGGGGATTCA +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWGPGQC*GRCGDS
Trigger: TGAATCCCCACATCGTCCTCAACATTGACCTGGCCC...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACCGTGTCCAGCAGCTTaGGGATGGATTTCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPPCPAA*GWISRP
Trigger: TGGACGGGAAATCCATCCTCAAGCTGCTGGACACGG...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp TCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTGTATGGTACTCAGCACGCTaGCACAGGTCCTTCACACGC +
Preference number: 4 (lower is better)
Translates to: SKVLHTNCWSLAGVLNTVWYSAR*HRSFTR
Trigger: GCGTGTGAAGGACCTGTGTCAGCGTGCTGAGTACCA...TACAGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR TCA 90 bp AATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGTGGTACTCAGCACGCTaGCACAGGTCCTTCACACGC +
Preference number: 4 (lower is better)
Translates to: NVHNCEGFSFTLATERLLWYSAR*HRSFTR
Trigger: GCGTGTGAAGGACCTGTGTCAGCGTGCTGAGTACCA...CAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR TCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGCGCTTTTTCTTCAGGTaGCCTCGGACTTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWRFFFR*PRTSLR
Trigger: CCTGAGGGAAGTCCGAGGTCACCTGAAGAAAAAGCG...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCGCTGGGTGTGGTAGCTaGTTTTGTGACAGTCACATT +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACAGCGS*FCDSHI
Trigger: AATGTGACTGTCACAAAATCAGCTACCACACCCAGC...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCTGTTCTGCAGGCGCTTaGGCAGCTTGCGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSCSAGA*AACGVS
Trigger: AGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACA...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCGGTAGGGGTCTGTGTTaGGATCAAAGTACTCTAGGA +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACGRGLC*DQSTLG
Trigger: TCCTAGAGTACTTTGATCTCAACACAGACCCCTACC...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGGTACGTGTAGCTGGTTaGGGACATCCCTGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: EVISAPAGYPPESVMLTEVRVAG*GHPCPV
Trigger: CACTGGACAGGGATGTCCTCAACCAGCTACACGTAC...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCGCCTGTTTGGGGCATTaGAACAAATGTGGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACACLGH*NKCGCF
Trigger: AAAGCACCCACATTTGTTTCAATGCCCCAAACAGGC...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTACACTCGACTGCCTTTaGCGAAAGCCTCGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPTLDCL*RKPRAR
Trigger: GCGAGCGCGAGGCTTTCGGCAAAGGCAGTCGAGTGT...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTGGGGCGGATGTTCCTaGGGTCCCTCTGAAACCTGC +
Preference number: 4 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFWGGCS*GPSETC
Trigger: GCAGGTTTCAGAGGGACCGCAGGAACATCCGCCCCA...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp GCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCGTCTTGTTCATCACCTaGATGGAACCCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: ATDSLSNVSALFSASPRCVLFIT*MEPSST
Trigger: TGTGGAGCTGGGTTCCATGCAGGTGATGAACAAGAC...GCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCGTCTTGTTCATCACCTaGATGGAACCCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQAVLFIT*MEPSST
Trigger: TGTGGAGCTGGGTTCCATGCAGGTGATGAACAAGAC...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGAAGGCGTTGATGAAGTaGGCCCCGCCCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GKCHLFCATDSLSNVSALKALMK*APPCSM
Trigger: CATGGAGCAGGGCGGGGCGCACTTCATCAACGCCTT...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp AGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAAGGCGTTGATGAAGTaGGCCCCGCCCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: RNTRRNGIWTGTEMSTTAKALMK*APPCSM
Trigger: CATGGAGCAGGGCGGGGCGCACTTCATCAACGCCTT...CGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp ACAAATGTGGGTGCTTTTAGGGATTATCTCCGTCATCTGTTAAATGAGAAATGGCTCTCGTGCTGTGCCTaGCAGGAGGGCGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TNVGAFRDYLRHLLNEKWLSCCA*QEGEEQ
Trigger: CTGCTCCTCGCCCTCCTGGCAGGCACAGCACGAGAG...CCATTTCTCATTTAACAGATGACGGAGATAATCCCTAAAAGCACCCACATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTATGAGGACTGGCCTGTaGGGGTACATCTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: CATDSLSNVSALFSASPRMRTGL*GYIFLD
Trigger: GTCCAAGAAGATGTACCCGCACAGGCCAGTCCTCAT...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCAGCCGCATGGGGCCCTTaGACTTATGCAGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPAAWGP*TYAASA
Trigger: AGCTGAAGCTGCATAAGTGCAAGGGCCCCATGCGGC...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCCGCATGGGGCCCTTaGACTTATGCAGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLAAWGP*TYAASA
Trigger: AGCTGAAGCTGCATAAGTGCAAGGGCCCCATGCGGC...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp CAAAGCTGGTATACTATGAGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTAGGTGCAGGCCTCGCTaGCCTGCCCGTAGTACTTGG +
Preference number: 4 (lower is better)
Translates to: QSWYTMRLTCSPLKYGRLRCRPR*PARSTW
Trigger: CCAAGTACTACGGGCAGGGCAGCGAGGCCTGCACCT...AAGTCTACCATACTTCAAGGGACTACAGGTAAGTCTCATAGTATACCAGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCTGGTCTTTCCAGGCCTaGAGGGACTTGTACAGGTCC +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSWSFQA*RDLYRS
Trigger: GGACCTGTACAAGTCCCTGCAGGCCTGGAAAGACCA...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGTGGTCTTTCCAGGCCTaGAGGGACTTGTACAGGTCC +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWWSFQA*RDLYRS
Trigger: GGACCTGTACAAGTCCCTGCAGGCCTGGAAAGACCA...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp AGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGCAGAAAGGCGCCGTCTaGCAGTGCTGGTTGTCGTGG +
Preference number: 4 (lower is better)
Translates to: RNTRRNGIWTGTEMSTTAQKGAV*QCWLSW
Trigger: CCACGACAACCAGCACTGGCAGACGGCGCCTTTCTG...CGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCAGTTTTTCATTGCCTGTaGAGTCAGGTGATGCCTCTA +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPVFHCL*SQVMPL
Trigger: TAGAGGCATCACCTGACTGCACAGGCAATGAAAAAC...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACCTGAGAGTGCGTGCTTaGTTTCTCAGGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHLRVRA*FLRPPG
Trigger: GCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAG...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTCTGCCTTTCAGGCGGTaGTGCGACAGGAAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCLPFRR*CDRKAE
Trigger: CTCGGCCTTCCTGTCGCACCACCGCCTGAAAGGCAG...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCTTCCAGCCGGGTaGCACGTAGGAGCCGTTGTA +
Preference number: 4 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPLLPAG*HVGAVV
Trigger: TACAACGGCTCCTACGTGCCACCCGGCTGGAAGGAG...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGCAAGCGCTTCCGCTaGAGCATGTTGGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLCKRFR*SMLVNS
Trigger: GGAATTCACCAACATGCTCCAGCGGAAGCGCTTGCA...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTGCCGCCCAGCCGCATaGGGCCCTTGCACTTATGCA +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCCRPAA*GPCTYA
Trigger: TGCATAAGTGCAAGGGCCCCATGCGGCTGGGCGGCA...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTCCTGCCCGTAGTACTTaGGCACGAGGTTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFPARST*ARGWRG
Trigger: CCCTCTCCAACCTCGTGCCCAAGTACTACGGGCAGG...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCTCGATGTGCAGCTTGTaGTCTTTCCAGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSSMCSL*SFQACR
Trigger: CCTGCAGGCCTGGAAAGACCACAAGCTGCACATCGA...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTTATTGTTGGCGCTaGTGCAGGCACAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLCYCWR*CRHRKA
Trigger: GGCCTTTCTGTGCCTGCACCAGCGCCAACAATAACA...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGGTCTCTTCATTTCTaGCCACTTTCGACGCTGAAA +
Preference number: 4 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVRSLHF*PLSTLK
Trigger: TTTCAGCGTCGAAAGTGGCCAGAAATGAAGAGACCT...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCATATCTCTGCTCCTGCTaGTTATCCTCCAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPYLCSC*LSSRIC
Trigger: ACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATA...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTGTTGCTAGGGAGCCTTaGCCTGTTTGGGGCATTGAA +
Preference number: 4 (lower is better)
Translates to: CATDSLSNVSALFSASPRVAREP*PVWGIE
Trigger: TTCAATGCCCCAAACAGGCCAAGGCTCCCTAGCAAC...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
3UTR CAA 72 bp AGGGAGTTGCTAGGGAGCCTTGGCCTGTTTGGGGCATaGAAACAAATGTGGGTGCTTTTAGGGATTATCTCC +
Preference number: 4 (lower is better)
Translates to: RELLGSLGLFGA*KQMWVLLGIIS
Trigger: GGAGATAATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTCCCTAGCAACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR TCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGTGGCTGGAAACGACGTaGATCTGCCTCTTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWWLETT*ICLFSA
Trigger: AGCGGAAAAGAGGCAGATTCACGTCGTTTCCAGCCA...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGTTGTAGCTCGGCGTaGTGTGCTGAGATGCGTTTG +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWSCSSA*CAEMRL
Trigger: CAAACGCATCTCAGCACATCACGCCGAGCTACAACT...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGCCGTGTCCAGCAGCTTaGGGATGGATTTCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: GKCHLFCATDSLSNVSALPCPAA*GWISRP
Trigger: TGGACGGGAAATCCATCCTCAAGCTGCTGGACACGG...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAACACCTCGATGGCCACTaGGCGGATGGAGCGACTGCG +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKHLDGH*ADGATA
Trigger: CGCAGTCGCTCCATCCGCTCAGTGGCCATCGAGGTG...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCCGCTTTTTCTTCAGGTaGCCTCGGACTTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLRFFFR*PRTSLR
Trigger: CCTGAGGGAAGTCCGAGGTCACCTGAAGAAAAAGCG...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCATGTTCTGCAGGCGCTTaGGCAGCTTGCGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPCSAGA*AACGVS
Trigger: AGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACA...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGGTACGTGTAGCTGGTTaGGGACATCCCTGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: NVHNCEGFSFTLATERLLVRVAG*GHPCPV
Trigger: CACTGGACAGGGATGTCCTCAACCAGCTACACGTAC...CAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AGGGAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATCCACAGTTGTCCCAGTaGTTTGGAAGAAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: REPWPVWGIETNVGAFRDPQLSQ*FGRRSL
Trigger: AAGAGACCTTCTTCCAAATCACTGGGACAACTGTGG...ATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR TCA 90 bp GCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCATCTGTCATGTTGACTaGGAGTGCGTGCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: ATDSLSNVSALFSASPRCICHVD*ECVLAF
Trigger: GAAAGCAAGCACGCACTCTCAGTCAACATGACAGAT...GCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTTCTCTTTTGTGCTACTaGCTCATTGTCAAACGTCTC +
Preference number: 4 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVSLLCY*LIVKRL
Trigger: GAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGA...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTGGACTCGCCCCGGTCTaGAAACACTCGACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFGLAPV*KHSTAF
Trigger: AAAGGCAGTCGAGTGTTTGCAGACCGGGGCGAGTCC...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTGCGGGAGTCTCAAGTTaGGTCTGTGGCTTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLAGVSS*VCGFVS
Trigger: AGAAACAAAGCCACAGACGCAACTTGAGACTCCCGC...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp AGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGCACTTCTGTCCCAGCTaGTCACACGCCGTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: RNTRRNGIWTGTEMSTTAHFCPS*SHAVWY
Trigger: GTACCAGACGGCGTGTGAGCAGCTGGGACAGAAGTG...CGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTACCTTGTCCTTCTCTTaGAGGCCCTTCCTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLTLSFS*RPFLKG
Trigger: TCCTTTCAGGAAGGGCCTGCAAGAGAAGGACAAGGT...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTACCTTGTCCTTCTCTTaGAGGCCCTTCCTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: CATDSLSNVSALFSASPRTLSFS*RPFLKG
Trigger: TCCTTTCAGGAAGGGCCTGCAAGAGAAGGACAAGGT...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCCACATGGTTTTTCATTaGCTGTGCAGTCAGGTGATG +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACHMVFH*LCSQVM
Trigger: CATCACCTGACTGCACAGGCAATGAAAAACCATGTG...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCCTGAGAGTGCGTGCTTaGTTTCTCAGGCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRLRVRA*FLRPPG
Trigger: GCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAG...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCATTGTCAAACGTCTCTaGACTGTTTTCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACIVKRL*TVFSLS
Trigger: GGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAAT...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTACACACATTTGCCATTaGAGAGGCCGGCGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTTHICH*RGRRRP
Trigger: CGGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGT...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGGAGTTGAAACAGATGTaGGATTCGCCCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EVISAPAGYPPESVMLTEELKQM*DSPRSW
Trigger: CCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTC...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCCTCAAGTTGCGTCTGTaGCTTTGTTTCTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACLKLRL*LCFFSL
Trigger: GAGGGAAAAGAAACAAAGCCACAGACGCAACTTGAG...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCATCTGGTGCTTCTTTTaGGATGCGGGAGTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQAIWCFF*DAGVSS
Trigger: ACTTGAGACTCCCGCATCCCAAAAGAAGCACCAGAT...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGTGTTCATCACCTGCATaGAACCCAGCTCCACATCCT +
Preference number: 4 (lower is better)
Translates to: EGFSFTLATERLLTPPLLCSSPA*NPAPHP
Trigger: AGGATGTGGAGCTGGGTTCCATGCAGGTGATGAACA...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCAGTGTTTGTCCGGGTTaGGCGCGTAGTTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLSVCPG*ARSCSS
Trigger: CGAGCTACAACTACGCGCCCAACCCGGACAAACACT...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCAAGTGTTTGTCCGGGTTaGGCGCGTAGTTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPSVCPG*ARSCSS
Trigger: CGAGCTACAACTACGCGCCCAACCCGGACAAACACT...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp ACAAATGTGGGTGCTTTTAGGGATTATCTCCGTCATCTGTTAAATGAGAAATGGAGCCGGCTTCCACGTTaGGGCCCCTCACGTAGAACG +
Preference number: 4 (lower is better)
Translates to: TNVGAFRDYLRHLLNEKWSRLPR*GPSRRT
Trigger: CGTTCTACGTGAGGGGCCCCAACGTGGAAGCCGGCT...CCATTTCTCATTTAACAGATGACGGAGATAATCCCTAAAAGCACCCACATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTCACACGCTGGTACTTaGGCAGAAAGTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CATDSLSNVSALFSASPRSHAGT*AESSPP
Trigger: AGGAGGAGAACTTTCTGCCCAAGTACCAGCGTGTGA...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTCCTGCCCGTAGTACTTaGGCACGAGGTTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCPARST*ARGWRG
Trigger: CCCTCTCCAACCTCGTGCCCAAGTACTACGGGCAGG...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp ACAAATGTGGGTGCTTTTAGGGATTATCTCCGTCATCTGTTAAATGAGAAATGGTCACCCAGGCCTACGTaGTACACCCTGCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: TNVGAFRDYLRHLLNEKWSPRPT*YTLPST
Trigger: GGTGGACGGCAGGGTGTACCACGTAGGCCTGGGTGA...CCATTTCTCATTTAACAGATGACGGAGATAATCCCTAAAAGCACCCACATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CCA 90 bp AATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGTCGATGTGCAGCTTGTaGTCTTTCCAGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NVHNCEGFSFTLATERLLSMCSL*SFQACR
Trigger: CCTGCAGGCCTGGAAAGACCACAAGCTGCACATCGA...CAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp AGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGCAGTGCTGGTTGTCGTaGGTGAAGCACGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RNTRRNGIWTGTEMSTTAQCWLS*VKHVRP
Trigger: AGGCCTCACGTGCTTCACCCACGACAACCAGCACTG...CGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGTGTTATTGTTGGCGCTaGTGCAGGCACAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLCYCWR*CRHRKA
Trigger: GGCCTTTCTGTGCCTGCACCAGCGCCAACAATAACA...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCTGTTATTGTTGGCGCTaGTGCAGGCACAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSCYCWR*CRHRKA
Trigger: GGCCTTTCTGTGCCTGCACCAGCGCCAACAATAACA...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCAGGTCTCTTCATTTCTaGCCACTTTCGACGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACRSLHF*PLSTLK
Trigger: TTTCAGCGTCGAAAGTGGCCAGAAATGAAGAGACCT...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCATGGAAATCACCCACATaGTTTTTCATTGCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: VMLTESACLLSQASWPIPWKSPT*FFIACA
Trigger: TGCACAGGCAATGAAAAACCATGTGGGTGATTTCCA...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACCTTTCTCAGGCCTCCTaGCCAATACCACAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHLSQAS*PIPQVC
Trigger: GCAGACCTGTGGTATTGGCCAGGAGGCCTGAGAAAG...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTATCTCTGCTCCTGCTaGTTATCCTCCAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACYLCSC*LSSRIC
Trigger: ACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATA...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCTGGCTGGAAACGACGTaGATCTGCCTCTTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLWLETT*ICLFSA
Trigger: AGCGGAAAAGAGGCAGATTCACGTCGTTTCCAGCCA...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTCCCTCGGCGGAGAGTTaGAACAGATGTGGGATTCGC +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCPSAES*NRCGIR
Trigger: GCGAATCCCACATCTGTTTCAACTCTCCGCCGAGGG...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp TCAGTTCTGGGACATAACAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAAGGACGTACTTGCCAGTaGGGATGGAGGAGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: SVLGHNKEILGEMVSGQEGRTCQ*GWRSVR
Trigger: CCTCACGCTCCTCCATCCTCACTGGCAAGTACGTCC...TTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTGTTATGTCCCAGAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR TCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAGGACGTACTTGCCAGTaGGGATGGAGGAGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSGRTCQ*GWRSVR
Trigger: CCTCACGCTCCTCCATCCTCACTGGCAAGTACGTCC...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGCGTAGAACGGGACCCTaGTGTCAAACTCATATGGCA +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWRRTGP*CQTHMA
Trigger: TGCCATATGAGTTTGACATCAGGGTCCCGTTCTACG...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTTGTTCTGCAGGCGCTTaGGCAGCTTGCGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPCSAGA*AACGVS
Trigger: AGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACA...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AGGGAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATAATTGTGAGTCTCATTaGTGGTCCTCATGCACCAGT +
Preference number: 4 (lower is better)
Translates to: REPWPVWGIETNVGAFRDNCESH*WSSCTS
Trigger: ACTGGTGCATGAGGACCATCAATGAGACTCACAATT...ATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR TCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCCAGAAGAGGAAATTGTaGGTCTCATTGATGGTCCTC +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQAQKRKL*VSLMVL
Trigger: GAGGACCATCAATGAGACTCACAATTTCCTCTTCTG...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGGCCTGTGCAGTCAGGTaGTGCCTCTATGTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: EVISAPAGYPPESVMLTEACAVR*CLYVFG
Trigger: TCCAAAAACATAGAGGCATCACCTGACTGCACAGGC...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGATCTGTCATGTTGACTaGGAGTGCGTGCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: EGFSFTLATERLLTPPLLICHVD*ECVLAF
Trigger: GAAAGCAAGCACGCACTCTCAGTCAACATGACAGAT...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTATTTTGTGCAGCTGGTaGGGTATAATCCAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVILCSW*GIIQSK
Trigger: TTTGCTTTGGATTATACCTCACCAGCTGCACAAAAT...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp ATGTCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTCTCCGTTTTCCTTTGTaGGCTTCTGGGGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: MSKVLHTNCWSLAGVLNTLRFPL*ASGGGL
Trigger: TAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAG...AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR TCA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACCTCCGTTTTCCTTTGTaGGCTTCTGGGGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHLRFPL*ASGGGL
Trigger: TAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAG...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCCATTGGCTGGGGTTTTaGACACTGTATGACAATACT +
Preference number: 4 (lower is better)
Translates to: SAPAGYPPESVMLTESACHWLGF*TLYDNT
Trigger: AGTATTGTCATACAGTGTTCAAAACCCCAGCCAATG...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCCCGTCATCTGTTAAATaGGAAATGGGTTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAPSSVK*EMGWTG
Trigger: ACCAGTCCAACCCATTTCTCATTTAACAGATGACGG...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCAGCCAGAGCCTTGTGTaGACGTGTGTGTGCGTAACA +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLSQSLV*TCVCVT
Trigger: TGTTACGCACACACACGTGCACACAAGGCTCTGGCT...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGCGGGAGTCTCAAGTTaGGTCTGTGGCTTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLAGVSS*VCGFVS
Trigger: AGAAACAAAGCCACAGACGCAACTTGAGACTCCCGC...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCACCTTTCAGGCGGTGGTaGGACAGGAAGGCCGAGCTT +
Preference number: 4 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSPFRRW*DRKAEL
Trigger: AAGCTCGGCCTTCCTGTCGCACCACCGCCTGAAAGG...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TCAGTTCTGGGACATAACAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAAGGTCCCTCTGAAACCTaGCTTTCAGGCGGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: SVLGHNKEILGEMVSGQEGPSET*LSGGGA
Trigger: CGCACCACCGCCTGAAAGGCAGGTTTCAGAGGGACC...TTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTGTTATGTCCCAGAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAGGTCCCTCTGAAACCTaGCTTTCAGGCGGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSGPSET*LSGGGA
Trigger: CGCACCACCGCCTGAAAGGCAGGTTTCAGAGGGACC...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGGTCTTGTTCATCACCTaGATGGAACCCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: EVISAPAGYPPESVMLTEVLFIT*MEPSST
Trigger: TGTGGAGCTGGGTTCCATGCAGGTGATGAACAAGAC...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCATGAGGACTGGCCTGTaGGGGTACATCTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLMRTGL*GYIFLD
Trigger: GTCCAAGAAGATGTACCCGCACAGGCCAGTCCTCAT...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGTCTTGTGTAGCAGCTTaGCTCTCTCCACCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWSCVAA*LSPPRR
Trigger: CCTTCTTGGTGGAGAGAGGCAAGCTGCTACACAAGA...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGTCTTGTGTAGCAGCTTaGCTCTCTCCACCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLSCVAA*LSPPRR
Trigger: CCTTCTTGGTGGAGAGAGGCAAGCTGCTACACAAGA...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TCAGTTCTGGGACATAACAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAAGCGTCCTCCACACACTaGCACTTCTGTCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SVLGHNKEILGEMVSGQEASSTH*HFCPSC
Trigger: GCAGCTGGGACAGAAGTGGCAGTGTGTGGAGGACGC...TTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTGTTATGTCCCAGAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTCTACGTGGTACACCCTaGCGTCCACCTCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTLRGTP*RPPRWP
Trigger: TGGCCATCGAGGTGGACGGCAGGGTGTACCACGTAG...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp GAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGCGGAGTTTCTTCTTaGGCTTCTGCTCCCGCAACA +
Preference number: 4 (lower is better)
Translates to: EMSTTARDFLLHWPQSVYCGVSS*ASAPAT
Trigger: TGTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCA...ATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCATGCGGAGTTTCTTCTTaGGCTTCTGCTCCCGCAACA +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPCGVSS*ASAPAT
Trigger: TGTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCA...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGCGGAGTTTCTTCTTaGGCTTCTGCTCCCGCAACA +
Preference number: 4 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHCGVSS*ASAPAT
Trigger: TGTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCA...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCAGAGTTGAAACAGATGTaGGATTCGCCCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPELKQM*DSPRSW
Trigger: CCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTC...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp TCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTGTAGAGTTGAAACAGATGTaGGATTCGCCCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SKVLHTNCWSLAGVLNTVELKQM*DSPRSW
Trigger: CCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTC...TACAGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp AGGGAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATCTCAAGTTGCGTCTGTaGCTTTGTTTCTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: REPWPVWGIETNVGAFRDLKLRL*LCFFSL
Trigger: GAGGGAAAAGAAACAAAGCCACAGACGCAACTTGAG...ATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCAGCGGGTACATCTTCTTaGACGTGCGGAAGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPAGTSS*TCGRSS
Trigger: TGAGCTTCTTCCGCACGTCCAAGAAGATGTACCCGC...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp ATGTCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTGATGACCATGAGGACTaGCCTGTGCGGGTACATCTT +
Preference number: 4 (lower is better)
Translates to: MSKVLHTNCWSLAGVLNTDDHED*PVRVHL
Trigger: AAGATGTACCCGCACAGGCCAGTCCTCATGGTCATC...AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp TCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTGTATTGGTGAATTCCATGTaGATGGGCTTCATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SKVLHTNCWSLAGVLNTVLVNSM*MGFMGP
Trigger: GGGGCCCATGAAGCCCATCCACATGGAATTCACCAA...TACAGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCTTCACACGCTaGTACTTGGGCAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWRSFTR*YLGRKF
Trigger: GAACTTTCTGCCCAAGTACCAGCGTGTGAAGGACCT...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCAGGTCCTTCACACGCTaGTACTTGGGCAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSRSFTR*YLGRKF
Trigger: GAACTTTCTGCCCAAGTACCAGCGTGTGAAGGACCT...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGGTCCTTCACACGCTaGTACTTGGGCAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: EVISAPAGYPPESVMLTERSFTR*YLGRKF
Trigger: GAACTTTCTGCCCAAGTACCAGCGTGTGAAGGACCT...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp AATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGAGGTCCAGGTCACACTaGACTGTGTCGTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: NVHNCEGFSFTLATERLLRSRSH*TVSFSR
Trigger: CCTAGAGAACGACACAGTCCAGTGTGACCTGGACCT...CAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTTCGATGTGCAGCTTGTaGTCTTTCCAGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPSMCSL*SFQACR
Trigger: CCTGCAGGCCTGGAAAGACCACAAGCTGCACATCGA...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACAGCTGTACGTGTAGCTaGTTGAGGACATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHSCTCS*LRTSLS
Trigger: GGACAGGGATGTCCTCAACCAGCTACACGTACAGCT...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATAGCTGTACGTGTAGCTaGTTGAGGACATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: EMSTTARDFLLHWPQSVYSCTCS*LRTSLS
Trigger: GGACAGGGATGTCCTCAACCAGCTACACGTACAGCT...ATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTTTCTCAGGCCTCCTaGCCAATACCACAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPLSQAS*PIPQVC
Trigger: GCAGACCTGTGGTATTGGCCAGGAGGCCTGAGAAAG...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp ATGTCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTTCCTTTGTGAGCTTCTaGGGGAGGGTTAGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: MSKVLHTNCWSLAGVLNTSFVSF*GRVSGD
Trigger: GTCACCACTAACCCTCCCCCAGAAGCTCACAAAGGA...AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR TCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCACTCGGCGTGATGTGCTaGGATGCGTTTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSLGVMC*DAFGKR
Trigger: CCTCTTCCCAAACGCATCTCAGCACATCACGCCGAG...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp TCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTGTACGTAGAACGGGACCCTaGTGTCAAACTCATATGGCA +
Preference number: 4 (lower is better)
Translates to: SKVLHTNCWSLAGVLNTVRRTGP*CQTHMA
Trigger: TGCCATATGAGTTTGACATCAGGGTCCCGTTCTACG...TACAGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR TCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGATCTTCTTTTTCAAGTaGAACCGATTCACCGGCCGC +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWIFFFK*NRFTGR
Trigger: GCGGCCGGTGAATCGGTTTCACTTGAAAAAGAAGAT...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGGCTGGGTGTGGTAGCTaGTTTTGTGACAGTCACATT +
Preference number: 4 (lower is better)
Translates to: EVISAPAGYPPESVMLTEAGCGS*FCDSHI
Trigger: AATGTGACTGTCACAAAATCAGCTACCACACCCAGC...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTGTTCTGCAGGCGCTTaGGCAGCTTGCGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCCSAGA*AACGVS
Trigger: AGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACA...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTAATTGTGAGTCTCATTaGTGGTCCTCATGCACCAGT +
Preference number: 4 (lower is better)
Translates to: CATDSLSNVSALFSASPRNCESH*WSSCTS
Trigger: ACTGGTGCATGAGGACCATCAATGAGACTCACAATT...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCCAGAATCTGTCATGTTaGCTGAGAGTGCGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLQNLSC*LRVRAC
Trigger: GCAAGCACGCACTCTCAGTCAACATGACAGATTCTG...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AGGGAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATAAAGCTGGTATACTATaGGACTTACCTGTAGTCCCT +
Preference number: 4 (lower is better)
Translates to: REPWPVWGIETNVGAFRDKAGIL*DLPVVP
Trigger: AGGGACTACAGGTAAGTCTCATAGTATACCAGCTTT...ATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTCTGCAAACACTCGACTaGCTTTGCCGAAAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCLQTLD*LCRKPR
Trigger: GCGAGGCTTTCGGCAAAGGCAGTCGAGTGTTTGCAG...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCATGTTTTCTTTTATCTaGTTTCACAGGACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAMFSFI*FHRTRP
Trigger: GGGGCGAGTCCTGTGAAAGCAGATAAAAGAAAACAT...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCAGTGCTTCTTTTGGGATaGGGGAGTCTCAAGTTGCGT +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPVLLLG*GSLKLR
Trigger: ACGCAACTTGAGACTCCCGCATCCCAAAAGAAGCAC...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp ATGTCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTGTGCTTCTTTTGGGATaGGGGAGTCTCAAGTTGCGT +
Preference number: 4 (lower is better)
Translates to: MSKVLHTNCWSLAGVLNTVLLLG*GSLKLR
Trigger: ACGCAACTTGAGACTCCCGCATCCCAAAAGAAGCAC...AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAACCTTTCAGGCGGTGGTaGGACAGGAAGGCCGAGCTT +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKPFRRW*DRKAEL
Trigger: AAGCTCGGCCTTCCTGTCGCACCACCGCCTGAAAGG...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCAACATCTTCTTGGACGTaGGGAAGAAGCTCACGCTGT +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPTSSWT*GRSSRC
Trigger: ACAGCGTGAGCTTCTTCCGCACGTCCAAGAAGATGT...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp ATGTCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTATCTCGTGGTCGATGTaGAGCTTGTGGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: MSKVLHTNCWSLAGVLNTISWSM*SLWSFQ
Trigger: CTGGAAAGACCACAAGCTGCACATCGACCACGAGAT...AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp GAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATACCTTGTCCTTCTCTTaGAGGCCCTTCCTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: EMSTTARDFLLHWPQSVYTLSFS*RPFLKG
Trigger: TCCTTTCAGGAAGGGCCTGCAAGAGAAGGACAAGGT...ATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTCTTCTTGCGCTTCTaGTCCCGCAACAGCCACACC +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCFFLRF*SRNSHT
Trigger: GGTGTGGCTGTTGCGGGAGCAGAAGCGCAAGAAGAA...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTCACGTGTCGTTGTTCTaGAGGCGCTTGAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCHVSLF*RRLSSL
Trigger: CAAGCTGCTCAAGCGCCTGCAGAACAACGACACGTG...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGGTTTTTCATTGCCTGTaGAGTCAGGTGATGCCTCTA +
Preference number: 4 (lower is better)
Translates to: EGFSFTLATERLLTPPLLVFHCL*SQVMPL
Trigger: TAGAGGCATCACCTGACTGCACAGGCAATGAAAAAC...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp AATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGCCAATACCACAGGTCTaGTGGAAATCACCCACATGG +
Preference number: 4 (lower is better)
Translates to: NVHNCEGFSFTLATERLLPIPQV*WKSPTW
Trigger: CCATGTGGGTGATTTCCAGCAGACCTGTGGTATTGG...CAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTGACTGAGAGTGCGTaGTTGCTTTCTCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GKCHLFCATDSLSNVSALLTESA*LLSQAS
Trigger: GGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAA...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTAGTTATCTCTGCTCCTaGTGGTTATCCTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: CATDSLSNVSALFSASPRSYLCS*WLSSRI
Trigger: GATTCTGGAGGATAACCAGCAGGAGCAGAGATAACT...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTCTCAAGTTGCGTCTGTaGCTTTGTTTCTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLLKLRL*LCFFSL
Trigger: GAGGGAAAAGAAACAAAGCCACAGACGCAACTTGAG...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGATCTGGTGCTTCTTTTaGGATGCGGGAGTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWIWCFF*DAGVSS
Trigger: ACTTGAGACTCCCGCATCCCAAAAGAAGCACCAGAT...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCTGTTCATCACCTGCATaGAACCCAGCTCCACATCCT +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLCSSPA*NPAPHP
Trigger: AGGATGTGGAGCTGGGTTCCATGCAGGTGATGAACA...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCATGTTCATCACCTGCATaGAACCCAGCTCCACATCCT +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPCSSPA*NPAPHP
Trigger: AGGATGTGGAGCTGGGTTCCATGCAGGTGATGAACA...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTGCGGGTACATCTTCTTaGACGTGCGGAAGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPAGTSS*TCGRSS
Trigger: TGAGCTTCTTCCGCACGTCCAAGAAGATGTACCCGC...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTATGTTGAGGACGATGTaGGGATTCAGACAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPMLRTM*GFRQPA
Trigger: AGCCGGCTGTCTGAATCCCCACATCGTCCTCAACAT...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGATGTTGAGGACGATGTaGGGATTCAGACAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: GKCHLFCATDSLSNVSALMLRTM*GFRQPA
Trigger: AGCCGGCTGTCTGAATCCCCACATCGTCCTCAACAT...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTAGGTCCAGGTCACACTaGACTGTGTCGTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPRSRSH*TVSFSR
Trigger: CCTAGAGAACGACACAGTCCAGTGTGACCTGGACCT...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAGAAGCACGTGAGGCCTaGCATGCTGCACGTGTCGTT +
Preference number: 4 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSEAREA*HAARVV
Trigger: AACGACACGTGCAGCATGCCAGGCCTCACGTGCTTC...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGAAGCACGTGAGGCCTaGCATGCTGCACGTGTCGTT +
Preference number: 4 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTEAREA*HAARVV
Trigger: AACGACACGTGCAGCATGCCAGGCCTCACGTGCTTC...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTTGTTATTGTTGGCGCTaGTGCAGGCACAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPCYCWR*CRHRKA
Trigger: GGCCTTTCTGTGCCTGCACCAGCGCCAACAATAACA...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGCTGCTGGTCATTGGCTaGGGTTTTGAACACTGTATG +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWLLVIG*GFEHCM
Trigger: CATACAGTGTTCAAAACCCCAGCCAATGACCAGCAG...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp TCAGTTCTGGGACATAACAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAAGGTAGCCAGTGCTATTaGGGTACACGGCAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: SVLGHNKEILGEMVSGQEGSQCY*GTRQRC
Trigger: GCACCTTTGCCGTGTACCTCAATAGCACTGGCTACC...TTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTGTTATGTCCCAGAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR TCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGAATTGTGAGTCTCATTaGTGGTCCTCATGCACCAGT +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLNCESH*WSSCTS
Trigger: ACTGGTGCATGAGGACCATCAATGAGACTCACAATT...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp GAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATGGTAGGGGTCTGTGTTaGGATCAAAGTACTCTAGGA +
Preference number: 4 (lower is better)
Translates to: EMSTTARDFLLHWPQSVYGRGLC*DQSTLG
Trigger: TCCTAGAGTACTTTGATCTCAACACAGACCCCTACC...ATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTCAGAATCTGTCATGTTaGCTGAGAGTGCGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFQNLSC*LRVRAC
Trigger: GCAAGCACGCACTCTCAGTCAACATGACAGATTCTG...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCAGAATCTGTCATGTTaGCTGAGAGTGCGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPQNLSC*LRVRAC
Trigger: GCAAGCACGCACTCTCAGTCAACATGACAGATTCTG...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCACAGGGAGAACACAGTTaGGGACAGCAAGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSQGEHS*GQQAQH
Trigger: GTGCTGTGCTTGCTGTCCGCAACTGTGTTCTCCCTG...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTATGAGGACTGGCCTGTaGGGGTACATCTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCMRTGL*GYIFLD
Trigger: GTCCAAGAAGATGTACCCGCACAGGCCAGTCCTCAT...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAAAGACTGGAGCCTCTGTaGTTGAGGCGGCCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKRLEPL*LRRPLC
Trigger: GCACAAAGGCCGCCTCAAGCACAGAGGCTCCAGTCT...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp TCAGTTCTGGGACATAACAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACCCTTCCTGAAAGGATaGAGACTGGAGCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SVLGHNKEILGEMVSGQEPFLKG*RLEPLC
Trigger: GCACAGAGGCTCCAGTCTGCATCCTTTCAGGAAGGG...TTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTGTTATGTCCCAGAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCACCCTTCCTGAAAGGATaGAGACTGGAGCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSPFLKG*RLEPLC
Trigger: GCACAGAGGCTCCAGTCTGCATCCTTTCAGGAAGGG...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTACCTTGTCCTTCTCTTaGAGGCCCTTCCTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFTLSFS*RPFLKG
Trigger: TCCTTTCAGGAAGGGCCTGCAAGAGAAGGACAAGGT...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp AGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTTTTAGTCAATCTACAACCCACGTGTCGTTGTTCTaGAGGCGCTTGAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RLTCSPLKYGRLFSQSTTHVSLF*RRLSSL
Trigger: CAAGCTGCTCAAGCGCCTGCAGAACAACGACACGTG...GGTTGTAGATTGACTAAAAAGTCTACCATACTTCAAGGGACTACAGGTAAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTCACGTGTCGTTGTTCTaGAGGCGCTTGAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTHVSLF*RRLSSL
Trigger: CAAGCTGCTCAAGCGCCTGCAGAACAACGACACGTG...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGTTTTTCATTGCCTGTaGAGTCAGGTGATGCCTCTA +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLVFHCL*SQVMPL
Trigger: TAGAGGCATCACCTGACTGCACAGGCAATGAAAAAC...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCCACATGGTTTTTCATTaGCTGTGCAGTCAGGTGATG +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSHMVFH*LCSQVM
Trigger: CATCACCTGACTGCACAGGCAATGAAAAACCATGTG...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTGACTGAGAGTGCGTaGTTGCTTTCTCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCLTESA*LLSQAS
Trigger: GGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAA...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAGTGTTTGTCCGGGTTaGGCGCGTAGTTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSSVCPG*ARSCSS
Trigger: CGAGCTACAACTACGCGCCCAACCCGGACAAACACT...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTAGAAAGTTCTCCTCCTaGGCGTCCACCTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPRKFSS*ASTLSL
Trigger: CAATGACAAGGTGGACGCCCAGGAGGAGAACTTTCT...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCACACGCTGGTACTTaGGCAGAAAGTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRSHAGT*AESSPP
Trigger: AGGAGGAGAACTTTCTGCCCAAGTACCAGCGTGTGA...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTAGGTCCAGGTCACACTaGACTGTGTCGTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCRSRSH*TVSFSR
Trigger: CCTAGAGAACGACACAGTCCAGTGTGACCTGGACCT...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCAGGGTTTCAATCTCGTaGTCGATGTGCAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRRVSIS*SMCSLW
Trigger: CCACAAGCTGCACATCGACCACGAGATTGAAACCCT...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp GAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATTATACAGTCACATTCTTCTaGCCGCTTTTTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: EPWPVWGIETNVGAFRDYTVTFF*PLFLQV
Trigger: CACCTGAAGAAAAAGCGGCCAGAAGAATGTGACTGT...ATAATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAAGAAGCACGTGAGGCCTaGCATGCTGCACGTGTCGTT +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKEAREA*HAARVV
Trigger: AACGACACGTGCAGCATGCCAGGCCTCACGTGCTTC...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATCTGCTGGTCATTGGCTaGGGTTTTGAACACTGTATG +
Preference number: 4 (lower is better)
Translates to: EMSTTARDFLLHWPQSVYLLVIG*GFEHCM
Trigger: CATACAGTGTTCAAAACCCCAGCCAATGACCAGCAG...ATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGACACCACCACTCCTGTACACAAAGAAGGGTTaGCCAAGGCGAATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: EGFSFTLATERLLTPPLLYTKKG*PRRISL
Trigger: CAAAGAAATTCGCCTTGGCCAACCCTTCTTTGTGTA...CAGGAGTGGTGGTGTCAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR TCA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTAGTTGTAGCTCGGCGTaGTGTGCTGAGATGCGTTTG +
Preference number: 4 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTSCSSA*CAEMRL
Trigger: CAAACGCATCTCAGCACATCACGCCGAGCTACAACT...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR TCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTCGTAGAACGGGACCCTaGTGTCAAACTCATATGGCA +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCRRTGP*CQTHMA
Trigger: TGCCATATGAGTTTGACATCAGGGTCCCGTTCTACG...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCGCTGGGTGTGGTAGCTaGTTTTGTGACAGTCACATT +
Preference number: 4 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRAGCGS*FCDSHI
Trigger: AATGTGACTGTCACAAAATCAGCTACCACACCCAGC...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACAGAAGAGGAAATTGTaGGTCTCATTGATGGTCCTC +
Preference number: 4 (lower is better)
Translates to: FCATDSLSNVSALFSASPQKRKL*VSLMVL
Trigger: GAGGACCATCAATGAGACTCACAATTTCCTCTTCTG...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGCCACAGTTGTCCCAGTaGTTTGGAAGAAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GKCHLFCATDSLSNVSALPQLSQ*FGRRSL
Trigger: AAGAGACCTTCTTCCAAATCACTGGGACAACTGTGG...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGTCTCTTTTGTGCTACTaGCTCATTGTCAAACGTCTC +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLSLLCY*LIVKRL
Trigger: GAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGA...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCCTGGTGATTGATAGTTaGAATCTGTCAACTACTTGT +
Preference number: 4 (lower is better)
Translates to: YPPESVMLTESACLLSQALVIDS*NLSTTC
Trigger: ACAAGTAGTTGACAGATTTCAACTATCAATCACCAG...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGATGTTTTCTTTTATCTaGTTTCACAGGACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWMFSFI*FHRTRP
Trigger: GGGGCGAGTCCTGTGAAAGCAGATAAAAGAAAACAT...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTTTTTGCTGATCTGGTaGTTCTTTTGGGATGCGGGA +
Preference number: 4 (lower is better)
Translates to: EMSTTARDFLLHWPQSVYFLLIW*FFWDAG
Trigger: TCCCGCATCCCAAAAGAAGCACCAGATCAGCAAAAA...ATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAACCCTTCCTGAAAGGATaGAGACTGGAGCCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKPFLKG*RLEPLC
Trigger: GCACAGAGGCTCCAGTCTGCATCCTTTCAGGAAGGG...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp ACAAATGTGGGTGCTTTTAGGGATTATCTCCGTCATCTGTTAAATGAGAAATGGTTGACTGAGAGTGCGTaGTTGCTTTCTCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TNVGAFRDYLRHLLNEKWLTESA*LLSQAS
Trigger: GGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAA...CCATTTCTCATTTAACAGATGACGGAGATAATCCCTAAAAGCACCCACATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCGTTCTTCATACCAACTaGTGGTCATTGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRVLHTN*WSLAGV
Trigger: AACCCCAGCCAATGACCAGCAGTTGGTATGAAGAAC...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTGTTCTTCATACCAACTaGTGGTCATTGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFVLHTN*WSLAGV
Trigger: AACCCCAGCCAATGACCAGCAGTTGGTATGAAGAAC...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGATCTGGTGCTTCTTTTaGGATGCGGGAGTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: GKCHLFCATDSLSNVSALIWCFF*DAGVSS
Trigger: ACTTGAGACTCCCGCATCCCAAAAGAAGCACCAGAT...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp AGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTTTTAGTCAATCTACAACCGATGACCATGAGGACTaGCCTGTGCGGGTACATCTT +
Preference number: 4 (lower is better)
Translates to: RLTCSPLKYGRLFSQSTTDDHED*PVRVHL
Trigger: AAGATGTACCCGCACAGGCCAGTCCTCATGGTCATC...GGTTGTAGATTGACTAAAAAGTCTACCATACTTCAAGGGACTACAGGTAAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CCA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTTGCAAGCGCTTCCGCTaGAGCATGTTGGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTCKRFR*SMLVNS
Trigger: GGAATTCACCAACATGCTCCAGCGGAAGCGCTTGCA...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTAGGGTTTCAATCTCGTaGTCGATGTGCAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCRVSIS*SMCSLW
Trigger: CCACAAGCTGCACATCGACCACGAGATTGAAACCCT...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CCA 90 bp ATGTCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTACAGTCACATTCTTCTaGCCGCTTTTTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: MSKVLHTNCWSLAGVLNTTVTFF*PLFLQV
Trigger: CACCTGAAGAAAAAGCGGCCAGAAGAATGTGACTGT...AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp TCAGTTCTGGGACATAACAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAAAGCTGTACGTGTAGCTaGTTGAGGACATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SVLGHNKEILGEMVSGQESCTCS*LRTSLS
Trigger: GGACAGGGATGTCCTCAACCAGCTACACGTACAGCT...TTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTGTTATGTCCCAGAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATTATATGCCTCTATGTTTTTaGAGGTCCACCTCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: EPWPVWGIETNVGAFRDYMPLCF*RSTSVV
Trigger: AACAACAGAGGTGGACCTCCAAAAACATAGAGGCAT...ATAATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGATGCCTCTATGTTTTTaGAGGTCCACCTCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWMPLCF*RSTSVV
Trigger: AACAACAGAGGTGGACCTCCAAAAACATAGAGGCAT...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGATGCCTCTATGTTTTTaGAGGTCCACCTCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLMPLCF*RSTSVV
Trigger: AACAACAGAGGTGGACCTCCAAAAACATAGAGGCAT...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCTGGAAATCACCCACATaGTTTTTCATTGCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSWKSPT*FFIACA
Trigger: TGCACAGGCAATGAAAAACCATGTGGGTGATTTCCA...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCATACCACAGGTCTGCTaGAAATCACCCACATGGTTT +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLIPQVC*KSPTWF
Trigger: AAACCATGTGGGTGATTTCCAGCAGACCTGTGGTAT...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTATCTCTGCTCCTGCTaGTTATCCTCCAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHYLCSC*LSSRIC
Trigger: ACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATA...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp ACAAATGTGGGTGCTTTTAGGGATTATCTCCGTCATCTGTTAAATGAGAAATGGTCCTTTGTGAGCTTCTaGGGGAGGGTTAGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: TNVGAFRDYLRHLLNEKWSFVSF*GRVSGD
Trigger: GTCACCACTAACCCTCCCCCAGAAGCTCACAAAGGA...CCATTTCTCATTTAACAGATGACGGAGATAATCCCTAAAAGCACCCACATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CCA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTAATGACTTTCGCCCTTaGGAGAAATTTCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLNDFRP*EKFPRK
Trigger: TTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATT...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCCTGCTGGTCATTGGCTaGGGTTTTGAACACTGTATG +
Preference number: 4 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRLLVIG*GFEHCM
Trigger: CATACAGTGTTCAAAACCCCAGCCAATGACCAGCAG...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGCTTCATACCAACTGCTaGTCATTGGCTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: GKCHLFCATDSLSNVSALLHTNC*SLAGVL
Trigger: CAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAG...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCGAGCCTTGGCCTGTTTaGGGCATTGAAACAAATGTG +
Preference number: 4 (lower is better)
Translates to: KIPMTFALGRNFQGNLSREPWPV*GIETNV
Trigger: CACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTC...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR TCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAATGGCTGGAAACGACGTaGATCTGCCTCTTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKWLETT*ICLFSA
Trigger: AGCGGAAAAGAGGCAGATTCACGTCGTTTCCAGCCA...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR TCA 90 bp CAAAGCTGGTATACTATGAGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTATCTTCTTTTTCAAGTaGAACCGATTCACCGGCCGC +
Preference number: 4 (lower is better)
Translates to: QSWYTMRLTCSPLKYGRLIFFFK*NRFTGR
Trigger: GCGGCCGGTGAATCGGTTTCACTTGAAAAAGAAGAT...AAGTCTACCATACTTCAAGGGACTACAGGTAAGTCTCATAGTATACCAGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR TCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGAATTGTGAGTCTCATTaGTGGTCCTCATGCACCAGT +
Preference number: 4 (lower is better)
Translates to: GKCHLFCATDSLSNVSALNCESH*WSSCTS
Trigger: ACTGGTGCATGAGGACCATCAATGAGACTCACAATT...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCCTGTGCAGTCAGGTaGTGCCTCTATGTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTACAVR*CLYVFG
Trigger: TCCAAAAACATAGAGGCATCACCTGACTGCACAGGC...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCCATTGGCTGGGGTTTTaGACACTGTATGACAATACT +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLHWLGF*TLYDNT
Trigger: AGTATTGTCATACAGTGTTCAAAACCCCAGCCAATG...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTTTTTGCTGATCTGGTaGTTCTTTTGGGATGCGGGA +
Preference number: 4 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRFLLIW*FFWDAG
Trigger: TCCCGCATCCCAAAAGAAGCACCAGATCAGCAAAAA...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAACATCTTCTTGGACGTaGGGAAGAAGCTCACGCTGT +
Preference number: 4 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSTSSWT*GRSSRC
Trigger: ACAGCGTGAGCTTCTTCCGCACGTCCAAGAAGATGT...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCATCTTGTGTAGCAGCTTaGCTCTCTCCACCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSSCVAA*LSPPRR
Trigger: CCTTCTTGGTGGAGAGAGGCAAGCTGCTACACAAGA...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp AGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGCACATGGTTTTTCATTaGCTGTGCAGTCAGGTGATG +
Preference number: 4 (lower is better)
Translates to: RNTRRNGIWTGTEMSTTAHMVFH*LCSQVM
Trigger: CATCACCTGACTGCACAGGCAATGAAAAACCATGTG...CGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCACCAATACCACAGGTCTaGTGGAAATCACCCACATGG +
Preference number: 4 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSPIPQV*WKSPTW
Trigger: CCATGTGGGTGATTTCCAGCAGACCTGTGGTATTGG...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTAGTTATCTCTGCTCCTaGTGGTTATCCTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPSYLCS*WLSSRI
Trigger: GATTCTGGAGGATAACCAGCAGGAGCAGAGATAACT...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGAGTTATCTCTGCTCCTaGTGGTTATCCTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: GKCHLFCATDSLSNVSALSYLCS*WLSSRI
Trigger: GATTCTGGAGGATAACCAGCAGGAGCAGAGATAACT...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp TGGTATACTATGAGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTTTTAGTTTGGTGAATTCCATGTaGATGGGCTTCATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: WYTMRLTCSPLKYGRLFSLVNSM*MGFMGP
Trigger: GGGGCCCATGAAGCCCATCCACATGGAATTCACCAA...ACTAAAAAGTCTACCATACTTCAAGGGACTACAGGTAAGTCTCATAGTATACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CCA 90 bp TCAGTTCTGGGACATAACAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAAAGAAAGTTCTCCTCCTaGGCGTCCACCTTGTCATTG +
Preference number: 4 (lower is better)
Translates to: SVLGHNKEILGEMVSGQERKFSS*ASTLSL
Trigger: CAATGACAAGGTGGACGCCCAGGAGGAGAACTTTCT...TTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTGTTATGTCCCAGAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAATCCTTTGTGAGCTTCTaGGGGAGGGTTAGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKSFVSF*GRVSGD
Trigger: GTCACCACTAACCCTCCCCCAGAAGCTCACAAAGGA...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp CAAAGCTGGTATACTATGAGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTCTTCATACCAACTGCTaGTCATTGGCTGGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: QSWYTMRLTCSPLKYGRLLHTNC*SLAGVL
Trigger: CAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAG...AAGTCTACCATACTTCAAGGGACTACAGGTAAGTCTCATAGTATACCAGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
3UTR CAA 72 bp CTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATaGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGKCHLFCATDS*SNVSALFSASP
Trigger: TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp TGGTATACTATGAGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTTTTAGTGCCTGTGCAGTCAGGTaGTGCCTCTATGTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: WYTMRLTCSPLKYGRLFSACAVR*CLYVFG
Trigger: TCCAAAAACATAGAGGCATCACCTGACTGCACAGGC...ACTAAAAAGTCTACCATACTTCAAGGGACTACAGGTAAGTCTCATAGTATACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR TCA 90 bp AGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTTTTAGTCAATCTACAACCATCTGTCATGTTGACTaGGAGTGCGTGCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: RLTCSPLKYGRLFSQSTTICHVD*ECVLAF
Trigger: GAAAGCAAGCACGCACTCTCAGTCAACATGACAGAT...GGTTGTAGATTGACTAAAAAGTCTACCATACTTCAAGGGACTACAGGTAAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR TCA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTATCTGTCATGTTGACTaGGAGTGCGTGCTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTICHVD*ECVLAF
Trigger: GAAAGCAAGCACGCACTCTCAGTCAACATGACAGAT...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCATTTTGTGCAGCTGGTaGGGTATAATCCAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLILCSW*GIIQSK
Trigger: TTTGCTTTGGATTATACCTCACCAGCTGCACAAAAT...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGATTTTGTGCAGCTGGTaGGGTATAATCCAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: NVHNCEGFSFTLATERLLILCSW*GIIQSK
Trigger: TTTGCTTTGGATTATACCTCACCAGCTGCACAAAAT...CAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGTCTCTTTTGTGCTACTaGCTCATTGTCAAACGTCTC +
Preference number: 4 (lower is better)
Translates to: RNTRRNGIWTGTEMSTTASLLCY*LIVKRL
Trigger: GAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGA...CGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCCATTGGCTGGGGTTTTaGACACTGTATGACAATACT +
Preference number: 4 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRHWLGF*TLYDNT
Trigger: AGTATTGTCATACAGTGTTCAAAACCCCAGCCAATG...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAAATCTCGTGGTCGATGTaGAGCTTGTGGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKISWSM*SLWSFQ
Trigger: CTGGAAAGACCACAAGCTGCACATCGACCACGAGAT...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGAAATGTCCACAACTaGGAGGGATTTTCTTTTACA +
Preference number: 4 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWRNVHN*EGFSFT
Trigger: TGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCT...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTACAGTCACATTCTTCTaGCCGCTTTTTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCTVTFF*PLFLQV
Trigger: CACCTGAAGAAAAAGCGGCCAGAAGAATGTGACTGT...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCAATGACTTTCGCCCTTaGGAGAAATTTCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLNDFRP*EKFPRK
Trigger: TTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATT...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAAGCTGGGTGTGGTAGCTaGTTTTGTGACAGTCACATT +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKAGCGS*FCDSHI
Trigger: AATGTGACTGTCACAAAATCAGCTACCACACCCAGC...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGATTTTGTGCAGCTGGTaGGGTATAATCCAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: GKCHLFCATDSLSNVSALILCSW*GIIQSK
Trigger: TTTGCTTTGGATTATACCTCACCAGCTGCACAAAAT...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR TCA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTAATGGGTTGGACTGGTaGTTGATAGTTGAAATCTGT +
Preference number: 4 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFNGLDW*LIVEIC
Trigger: ACAGATTTCAACTATCAATCACCAGTCCAACCCATT...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp ATGTCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTAGAAATGTCCACAACTaGGAGGGATTTTCTTTTACA +
Preference number: 4 (lower is better)
Translates to: MSKVLHTNCWSLAGVLNTRNVHN*EGFSFT
Trigger: TGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCT...AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAAGTTCTTCATACCAACTaGTGGTCATTGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKVLHTN*WSLAGV
Trigger: AACCCCAGCCAATGACCAGCAGTTGGTATGAAGAAC...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp ACAAATGTGGGTGCTTTTAGGGATTATCTCCGTCATCTGTTAAATGAGAAATGGAGGTCTCTTCATTTCTaGCCACTTTCGACGCTGAAA +
Preference number: 4 (lower is better)
Translates to: TNVGAFRDYLRHLLNEKWRSLHF*PLSTLK
Trigger: TTTCAGCGTCGAAAGTGGCCAGAAATGAAGAGACCT...CCATTTCTCATTTAACAGATGACGGAGATAATCCCTAAAAGCACCCACATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CCA 90 bp TCAGTTCTGGGACATAACAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAAATACCACAGGTCTGCTaGAAATCACCCACATGGTTT +
Preference number: 4 (lower is better)
Translates to: SVLGHNKEILGEMVSGQEIPQVC*KSPTWF
Trigger: AAACCATGTGGGTGATTTCCAGCAGACCTGTGGTAT...TTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTGTTATGTCCCAGAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp AATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATTGCTGTTAAATGAGAAATaGGTTGGACTGGTGATTGAT +
Preference number: 4 (lower is better)
Translates to: NVHNCEGFSFTLATERLLLLNEK*VGLVID
Trigger: ATCAATCACCAGTCCAACCCATTTCTCATTTAACAG...CAATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CCA 90 bp GAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATGCATTGAAACAAATGTaGGTGCTTTTAGGGATTATC +
Preference number: 4 (lower is better)
Translates to: EMSTTARDFLLHWPQSVYALKQM*VLLGII
Trigger: GATAATCCCTAAAAGCACCCACATTTGTTTCAATGC...ATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR GCA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTATGTTTTCTTTTATCTaGTTTCACAGGACTCGCCCC +
Preference number: 4 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTMFSFI*FHRTRP
Trigger: GGGGCGAGTCCTGTGAAAGCAGATAAAAGAAAACAT...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR GCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAATTTTTGCTGATCTGGTaGTTCTTTTGGGATGCGGGA +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKFLLIW*FFWDAG
Trigger: TCCCGCATCCCAAAAGAAGCACCAGATCAGCAAAAA...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR GCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAAATTGTCAAACGTCTCTaGACTGTTTTCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKIVKRL*TVFSLS
Trigger: GGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAAT...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR GCA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTAGAAATGTCCACAACTaGGAGGGATTTTCTTTTACA +
Preference number: 4 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFRNVHN*EGFSFT
Trigger: TGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCT...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTTGGAAATCACCCACATaGTTTTTCATTGCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTWKSPT*FFIACA
Trigger: TGCACAGGCAATGAAAAACCATGTGGGTGATTTCCA...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCATGAAGTACCAAAGCTaGTATACTATGAGACTTACC +
Preference number: 4 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRMKYQS*YTMRLT
Trigger: GGTAAGTCTCATAGTATACCAGCTTTGGTACTTCAT...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR TCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAATCTCTTTTGTGCTACTaGCTCATTGTCAAACGTCTC +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKSLLCY*LIVKRL
Trigger: GAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGA...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAATGGAAATCACCCACATaGTTTTTCATTGCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKWKSPT*FFIACA
Trigger: TGCACAGGCAATGAAAAACCATGTGGGTGATTTCCA...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CCA 90 bp AGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTTTTAGTCAATCTACAACCAATGACTTTCGCCCTTaGGAGAAATTTCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: RLTCSPLKYGRLFSQSTTNDFRP*EKFPRK
Trigger: TTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATT...GGTTGTAGATTGACTAAAAAGTCTACCATACTTCAAGGGACTACAGGTAAGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CCA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAATGACTTTCGCCCTTaGGAGAAATTTCCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSNDFRP*EKFPRK
Trigger: TTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATT...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
3UTR CAA 72 bp CAAAGCTGGTATACTATGAGACTTACCTGTAGTCCCTaGAAGTATGGTAGACTTTTTAGTCAATCTACAACC +
Preference number: 4 (lower is better)
Translates to: QSWYTMRLTCSP*KYGRLFSQSTT
Trigger: GGTTGTAGATTGACTAAAAAGTCTACCATACTTCAAGGGACTACAGGTAAGTCTCATAGTATACCAGCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR TCA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTTTACCTGTAGTCCCTTaGAGTATGGTAGACTTTTTA +
Preference number: 4 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTLPVVP*SMVDFL
Trigger: TAAAAAGTCTACCATACTTCAAGGGACTACAGGTAA...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS CCA 90 bp TGGGGTCCCGGCGGCTCTCGACCTCCCGATGCCTCCGGACTCGGCTaGCCGCGCTCCCGGCGCCGAGCGCGCACCCTCGCCGGGACACAC +
Preference number: 5 (lower is better)
Translates to: WGPGGSRPPDASGLG*PRSRRRARTLAGTH
Trigger: GTGTGTCCCGGCGAGGGTGCGCGCTCGGCGCCGGGAGCGCGGCCAGCCGAGTCCGGAGGCATCGGGAGGTCGAGAGCCGCCGGGACCCCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000463221.2
CDS CCA 90 bp CCCCGCTGTCACAGGTGCAGGCCTCGCTGCCCTGCCCGTAGTACTTaGGCACGAGGTTGGAGAGGGCTCTGCTGCCGCCCAGCCGCATGG +
Preference number: 5 (lower is better)
Translates to: PRCHRCRPRCPARST*ARGWRGLCCRPAAW
Trigger: CCATGCGGCTGGGCGGCAGCAGAGCCCTCTCCAACCTCGTGCCCAAGTACTACGGGCAGGGCAGCGAGGCCTGCACCTGTGACAGCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000465769.1
ENST00000467815.5
ENST00000484875.5
CDS CCA 90 bp TTGCCGAAAGCCTCGCGCTCGCCTCCAGCCACACACATTTGCCATTaGAGAGGCCGGCGCCGGCCGCGACCCGCAGCTCAATCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: LPKASRSPPATHICH*RGRRRPRPAAQSQG
Trigger: GCCCTGCGATTGAGCTGCGGGTCGCGGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGTGGCTGGAGGCGAGCGCGAGGCTTTCGGCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CCA 90 bp AGGTGCAGGCCTCGCTGCCCTGCCCGTAGTACTTGGGCACGAGGTTaGAGAGGGCTCTGCTGCCGCCCAGCCGCATGGGGCCCTTGCACT +
Preference number: 5 (lower is better)
Translates to: RCRPRCPARSTWARG*RGLCCRPAAWGPCT
Trigger: AGTGCAAGGGCCCCATGCGGCTGGGCGGCAGCAGAGCCCTCTCCAACCTCGTGCCCAAGTACTACGGGCAGGGCAGCGAGGCCTGCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000465769.1
ENST00000467815.5
ENST00000484875.5
CDS GCA 90 bp CTGCCTTTGCCGAAAGCCTCGCGCTCGCCTCCAGCCACACACATTTaGCATTGGAGAGGCCGGCGCCGGCCGCGACCCGCAGCTCAATCG +
Preference number: 5 (lower is better)
Translates to: LPLPKASRSPPATHI*HWRGRRRPRPAAQS
Trigger: CGATTGAGCTGCGGGTCGCGGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGTGGCTGGAGGCGAGCGCGAGGCTTTCGGCAAAGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 90 bp GGTTTCGGGGCTGGGCGGCATCACCCAGGCCTACGTGGTACACCCTaGCGTCCACCTCGATGGCCACTGAGCGGATGGAGCGACTGCGGA +
Preference number: 5 (lower is better)
Translates to: GFGAGRHHPGLRGTP*RPPRWPLSGWSDCG
Trigger: TCCGCAGTCGCTCCATCCGCTCAGTGGCCATCGAGGTGGACGGCAGGGTGTACCACGTAGGCCTGGGTGATGCCGCCCAGCCCCGAAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 90 bp GAGAGGGCTCTGCTGCCGCCCAGCCGCATGGGGCCCTTGCACTTATaGAGCTTCAGCTTCCCCGTGGCGTCCTCCACACACTGCCACTTC +
Preference number: 5 (lower is better)
Translates to: ERALLPPSRMGPLHL*SFSFPVASSTHCHF
Trigger: GAAGTGGCAGTGTGTGGAGGACGCCACGGGGAAGCTGAAGCTGCATAAGTGCAAGGGCCCCATGCGGCTGGGCGGCAGCAGAGCCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000465769.1
ENST00000467815.5
ENST00000484875.5
CDS GCA 90 bp CGAGGTTGGAGAGGGCTCTGCTGCCGCCCAGCCGCATGGGGCCCTTaGACTTATGCAGCTTCAGCTTCCCCGTGGCGTCCTCCACACACT +
Preference number: 5 (lower is better)
Translates to: RGWRGLCCRPAAWGP*TYAASASPWRPPHT
Trigger: AGTGTGTGGAGGACGCCACGGGGAAGCTGAAGCTGCATAAGTGCAAGGGCCCCATGCGGCTGGGCGGCAGCAGAGCCCTCTCCAACCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000465769.1
ENST00000467815.5
ENST00000484875.5
CDS CCA 90 bp CGGCATCACCCAGGCCTACGTGGTACACCCTGCCGTCCACCTCGATaGCCACTGAGCGGATGGAGCGACTGCGGACATAGCTGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: RHHPGLRGTPCRPPR*PLSGWSDCGHSWPC
Trigger: ACAAGGCCAGCTATGTCCGCAGTCGCTCCATCCGCTCAGTGGCCATCGAGGTGGACGGCAGGGTGTACCACGTAGGCCTGGGTGATGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CCA 90 bp CCAGCCGCATGGGGCCCTTGCACTTATGCAGCTTCAGCTTCCCCGTaGCGTCCTCCACACACTGCCACTTCTGTCCCAGCTGCTCACACG +
Preference number: 5 (lower is better)
Translates to: PAAWGPCTYAASASP*RPPHTATSVPAAHT
Trigger: CGTGTGAGCAGCTGGGACAGAAGTGGCAGTGTGTGGAGGACGCCACGGGGAAGCTGAAGCTGCATAAGTGCAAGGGCCCCATGCGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000465769.1
ENST00000467815.5
ENST00000484875.5
CDS CCA 90 bp ACACTCTCGCTCCTGCTCGCCCTCGGCGGAGAGTTGAAACAGATGTaGGATTCGCCCAGGAGCTGGAAACGAGGGAGGGAAGCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: TLSLLLALGGELKQM*DSPRSWKRGREASQ
Trigger: CTGGCTCGCTTCCCTCCCTCGTTTCCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTCTCCGCCGAGGGCGAGCAGGAGCGAGAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS TCA 90 bp ACTCACTCGACACACTCTCGCTCCTGCTCGCCCTCGGCGGAGAGTTaGAACAGATGTGGGATTCGCCCAGGAGCTGGAAACGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: THSTHSRSCSPSAES*NRCGIRPGAGNEGG
Trigger: CCCTCCCTCGTTTCCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTCTCCGCCGAGGGCGAGCAGGAGCGAGAGTGTGTCGAGTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS TCA 90 bp GTCAGCACCAGGATGATGTTGGGGCGGATGTTCCTGCGGTCCCTCTaGAACCTGCCTTTCAGGCGGTGGTGCGACAGGAAGGCCGAGCTT +
Preference number: 5 (lower is better)
Translates to: VSTRMMLGRMFLRSL*NLPFRRWCDRKAEL
Trigger: AAGCTCGGCCTTCCTGTCGCACCACCGCCTGAAAGGCAGGTTTCAGAGGGACCGCAGGAACATCCGCCCCAACATCATCCTGGTGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359930.8
ENST00000437955.1
ENST00000463221.2
ENST00000467815.5
ENST00000474450.5
ENST00000484875.5
CDS TCA 90 bp ACCCAGGCCTACGTGGTACACCCTGCCGTCCACCTCGATGGCCACTaGGCGGATGGAGCGACTGCGGACATAGCTGGCCTTGTACTTCTT +
Preference number: 5 (lower is better)
Translates to: TQAYVVHPAVHLDGH*ADGATADIAGLVLL
Trigger: AAGAAGTACAAGGCCAGCTATGTCCGCAGTCGCTCCATCCGCTCAGTGGCCATCGAGGTGGACGGCAGGGTGTACCACGTAGGCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS TCA 90 bp GCAGATTCGACACACTCTCGCTCCTGCTCGCCCTCGGCGGAGAGTTaGAACAGATGTGGGATTCGCCCAGGAGCTGGAAACGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: ADSTHSRSCSPSAES*NRCGIRPGAGNEGG
Trigger: CCCTCCCTCGTTTCCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTCTCCGCCGAGGGCGAGCAGGAGCGAGAGTGTGTCGAATCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467815.5
ENST00000484875.5
CDS CCA 90 bp GCCCTCGGCGGAGAGTTGAAACAGATGTGGGATTCGCCCAGGAGCTaGAAACGAGGGAGGGAAGCGAGCCAGAGCCTTGTGTGCACGTGT +
Preference number: 5 (lower is better)
Translates to: ALGGELKQMWDSPRS*KRGREASQSLVCTC
Trigger: ACACGTGCACACAAGGCTCTGGCTCGCTTCCCTCCCTCGTTTCCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTCTCCGCCGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTGTGGTCACGAAGGCGTaGATGAAGTGCGCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSVVTKA*MKCAPP
Trigger: GGGCGGGGCGCACTTCATCAACGCCTTCGTGACCAC...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 90 bp TGCTTTCACAGGACTCGCCCCGGTCTGCAAACACTCGACTGCCTTTaGCGAAAGCCTCGCGCTCGCCTCCAGCCACACACATTTGCCATT +
Preference number: 5 (lower is better)
Translates to: CFHRTRPGLQTLDCL*RKPRARLQPHTFAI
Trigger: AATGGCAAATGTGTGTGGCTGGAGGCGAGCGCGAGGCTTTCGGCAAAGGCAGTCGAGTGTTTGCAGACCGGGGCGAGTCCTGTGAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 90 bp CCCAGGAGCTGGAAACGAGGGAGGGAAGCGAGCCAGAGCCTTGTGTaGACGTGTGTGTGCGTAACACACAAACCAGGGGGCATCGCTAAT +
Preference number: 5 (lower is better)
Translates to: PRSWKRGREASQSLV*TCVCVTHKPGGIAN
Trigger: ATTAGCGATGCCCCCTGGTTTGTGTGTTACGCACACACACGTGCACACAAGGCTCTGGCTCGCTTCCCTCCCTCGTTTCCAGCTCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 90 bp TGGGTGAAGCACGTGAGGCCTGGCATGCTGCACGTGTCGTTGTTCTaGAGGCGCTTGAGCAGCTTGCGGAGTTTCTTCTTGCGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: WVKHVRPGMLHVSLF*RRLSSLRSFFLRFC
Trigger: GCAGAAGCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACAACGACACGTGCAGCATGCCAGGCCTCACGTGCTTCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS GCA 90 bp TTCTGCAGGCGCTTGAGCAGCTTGCGGAGTTTCTTCTTGCGCTTCTaGTCCCGCAACAGCCACACCTTGTCCTTCTCTTGCAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: FCRRLSSLRSFFLRF*SRNSHTLSFSCRPF
Trigger: GAAGGGCCTGCAAGAGAAGGACAAGGTGTGGCTGTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTAGCCGCATGGGGCCCTaGCACTTATGCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSSRMGP*HLCSFS
Trigger: GCTGAAGCTGCATAAGTGCAAGGGCCCCATGCGGCT...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCATACTTGGGCACGAGGTaGGAGAGGGCTCTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: VMLTESACLLSQASWPIPYLGTR*ERALLP
Trigger: CGGCAGCAGAGCCCTCTCCAACCTCGTGCCCAAGTA...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTTACTTGGGCACGAGGTaGGAGAGGGCTCTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVYLGTR*ERALLP
Trigger: CGGCAGCAGAGCCCTCTCCAACCTCGTGCCCAAGTA...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCCTGGCCAGTGCCGCTaGGTGAGGTTTCGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: ATDSLSNVSALFSASPRCPGQCR*VRFRGW
Trigger: CCAGCCCCGAAACCTCACCAAGCGGCACTGGCCAGG...GCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGCAGGCCTGCAGGGACTaGTACAGGTCCAGGTCACAC +
Preference number: 5 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRQACRD*YRSRSH
Trigger: GTGTGACCTGGACCTGTACAAGTCCCTGCAGGCCTG...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 90 bp TTTATCTGCTTTCACAGGACTCGCCCCGGTCTGCAAACACTCGACTaGCTTTGCCGAAAGCCTCGCGCTCGCCTCCAGCCACACACATTT +
Preference number: 5 (lower is better)
Translates to: FICFHRTRPGLQTLD*LCRKPRARLQPHTF
Trigger: AAATGTGTGTGGCTGGAGGCGAGCGCGAGGCTTTCGGCAAAGGCAGTCGAGTGTTTGCAGACCGGGGCGAGTCCTGTGAAAGCAGATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 90 bp TTCAGGAGGCTTGTCCTGTCTGCGCGGGGAGGAGAGGTGTGGACCTaGATCAGTGGGAAGTCTGTCACACTCTGGAGTTTAGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: FRRLVLSARGGEVWT*ISGKSVTLWSLVRK
Trigger: CTTCCTGACTAAACTCCAGAGTGTGACAGACTTCCCACTGATGCAGGTCCACACCTCTCCTCCCCGCGCAGACAGGACAAGCCTCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478766.1
CDS TCA 90 bp TTTTCAAGTGAAACCGATTCACCGGCCGCTCCGTGTCCAGCAGCTTaGGGATGGATTTCCCGTCCATATCCGCAGGTATGTCCAGGCCTG +
Preference number: 5 (lower is better)
Translates to: FSSETDSPAAPCPAA*GWISRPYPQVCPGL
Trigger: CAGGCCTGGACATACCTGCGGATATGGACGGGAAATCCATCCTCAAGCTGCTGGACACGGAGCGGCCGGTGAATCGGTTTCACTTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CCA 90 bp TCTGGTACTCAGCACGCTGACACAGGTCCTTCACACGCTGGTACTTaGGCAGAAAGTTCTCCTCCTGGGCGTCCACCTTGTCATTGTCTC +
Preference number: 5 (lower is better)
Translates to: SGTQHADTGPSHAGT*AESSPPGRPPCHCL
Trigger: GAGACAATGACAAGGTGGACGCCCAGGAGGAGAACTTTCTGCCCAAGTACCAGCGTGTGAAGGACCTGTGTCAGCGTGCTGAGTACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000465769.1
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCAAGCGAGCCAGAGCCTaGTGTGCACGTGTGTGTGCG +
Preference number: 5 (lower is better)
Translates to: SAPAGYPPESVMLTESACKRARA*CARVCA
Trigger: CGCACACACACGTGCACACAAGGCTCTGGCTCGCTT...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCAGCACCAGGATGATGTaGGGGCGGATGTTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: SAPAGYPPESVMLTESACSTRMM*GRMFLR
Trigger: CCGCAGGAACATCCGCCCCAACATCATCCTGGTGCT...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGTGGTTGTGGACGTACTaGCCAGTGAGGATGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GNLSRSLSPFSFVSFWGRWLWTY*PVRMEE
Trigger: CTCCTCCATCCTCACTGGCAAGTACGTCCACAACCA...CCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTGGGGCCAGGTCAATGTaGAGGACGATGTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVGARSM*RTMWGF
Trigger: GAATCCCCACATCGTCCTCAACATTGACCTGGCCCC...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCCCTGGCCAGTGCCGCTaGGTGAGGTTTCGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSPGQCR*VRFRGW
Trigger: CCAGCCCCGAAACCTCACCAAGCGGCACTGGCCAGG...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCCAGGCCTGCAGGGACTaGTACAGGTCCAGGTCACAC +
Preference number: 5 (lower is better)
Translates to: SAPAGYPPESVMLTESACQACRD*YRSRSH
Trigger: GTGTGACCTGGACCTGTACAAGTCCCTGCAGGCCTG...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCTGGAGCCTCTGTGCTaGAGGCGGCCTTTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: ATDSLSNVSALFSASPRCLEPLC*RRPLCW
Trigger: CCAGCACAAAGGCCGCCTCAAGCACAGAGGCTCCAG...GCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS GCA 90 bp GTTTCAATCTCGTGGTCGATGTGCAGCTTGTGGTCTTTCCAGGCCTaGAGGGACTTGTACAGGTCCAGGTCACACTGGACTGTGTCGTTC +
Preference number: 5 (lower is better)
Translates to: VSISWSMCSLWSFQA*RDLYRSRSHWTVSF
Trigger: GAACGACACAGTCCAGTGTGACCTGGACCTGTACAAGTCCCTGCAGGCCTGGAAAGACCACAAGCTGCACATCGACCACGAGATTGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCCACACACATTTGCCATaGGAGAGGCCGGCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSHTHLP*ERPAPA
Trigger: GGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGTG...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCAAGCGAGCCAGAGCCTaGTGTGCACGTGTGTGTGCG +
Preference number: 5 (lower is better)
Translates to: YPPESVMLTESACLLSQAKRARA*CARVCA
Trigger: CGCACACACACGTGCACACAAGGCTCTGGCTCGCTT...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTGTTGCGTCTGTGGCTTaGTTTCTTTTCCCTCGTCCC +
Preference number: 5 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSVASVA*FLFPRP
Trigger: GGGACGAGGGAAAAGAAACAAAGCCACAGACGCAAC...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTTGCGGGAGTCTCAAGTaGCGTCTGTGGCTTTGTTTC +
Preference number: 5 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSCGSLK*RLWLCF
Trigger: GAAACAAAGCCACAGACGCAACTTGAGACTCCCGCA...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCGGGGCCAGGTCAATGTaGAGGACGATGTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: SAPAGYPPESVMLTESACGARSM*RTMWGF
Trigger: GAATCCCCACATCGTCCTCAACATTGACCTGGCCCC...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCAGCCGCATGGGGCCCTaGCACTTATGCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: YPPESVMLTESACLLSQASRMGP*HLCSFS
Trigger: GCTGAAGCTGCATAAGTGCAAGGGCCCCATGCGGCT...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATCCTGGCCAGTGCCGCTaGGTGAGGTTTCGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: EMSTTARDFLLHWPQSVYPGQCR*VRFRGW
Trigger: CCAGCCCCGAAACCTCACCAAGCGGCACTGGCCAGG...ATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CAA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCAGGCGCTTGAGCAGCTaGCGGAGTTTCTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: SAPAGYPPESVMLTESACRRLSS*RSFFLR
Trigger: GCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCT...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCATTGTTCTGCAGGCGCTaGAGCAGCTTGCGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: VMLTESACLLSQASWPIPLFCRR*SSLRSF
Trigger: GAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACAA...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCATGCTGCACGTGTCGTaGTTCTGCAGGCGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: SAPAGYPPESVMLTESACMLHVS*FCRRLS
Trigger: GCTCAAGCGCCTGCAGAACAACGACACGTGCAGCAT...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCACACCAGTACGTGTTATaGTTGGCGCTGGTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: VMLTESACLLSQASWPIPHQYVL*LALVQA
Trigger: TGCCTGCACCAGCGCCAACAATAACACGTACTGGTG...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCAACGCCACTAGGGAGTaGCTAGGGAGCCTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: YPPESVMLTESACLLSQANATRE*LGSLGL
Trigger: CAGGCCAAGGCTCCCTAGCAACTCCCTAGTGGCGTT...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS CCA 90 bp GGAGGAGAGGTGTGGACCTGCATCAGTGGGAAGTCTGTCACACTCTaGAGTTTAGTCAGGAAGCCCAAATGCTCTCAGAAGGAAGCCATG +
Preference number: 5 (lower is better)
Translates to: GGEVWTCISGKSVTL*SLVRKPKCSQKEAM
Trigger: CATGGCTTCCTTCTGAGAGCATTTGGGCTTCCTGACTAAACTCCAGAGTGTGACAGACTTCCCACTGATGCAGGTCCACACCTCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478766.1
CDS-3UTR CAA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTAACACTCGACTGCCTTaGCCGAAAGCCTCGCGCTCG +
Preference number: 5 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLNTRLP*PKASRS
Trigger: CGAGCGCGAGGCTTTCGGCAAAGGCAGTCGAGTGTT...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTAACACTCGACTGCCTTaGCCGAAAGCCTCGCGCTCG +
Preference number: 5 (lower is better)
Translates to: CATDSLSNVSALFSASPRNTRLP*PKASRS
Trigger: CGAGCGCGAGGCTTTCGGCAAAGGCAGTCGAGTGTT...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCGCCCTCGGCGGAGAGTaGAAACAGATGTGGGATTCG +
Preference number: 5 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAALGGE*KQMWDS
Trigger: CGAATCCCACATCTGTTTCAACTCTCCGCCGAGGGC...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCGCAGGGAGAACACAGTaGCGGACAGCAAGCACAGCA +
Preference number: 5 (lower is better)
Translates to: ATDSLSNVSALFSASPRCAGRTQ*RTASTA
Trigger: TGCTGTGCTTGCTGTCCGCAACTGTGTTCTCCCTGC...GCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTGCGGGTACATCTTCTaGGACGTGCGGAAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: SAPAGYPPESVMLTESACCGYIF*DVRKKL
Trigger: GAGCTTCTTCCGCACGTCCAAGAAGATGTACCCGCA...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCTGGTCGATGTGCAGCTaGTGGTCTTTCCAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: ATDSLSNVSALFSASPRCWSMCS*WSFQAC
Trigger: GCAGGCCTGGAAAGACCACAAGCTGCACATCGACCA...GCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCCTGGAGCCTCTGTGCTaGAGGCGGCCTTTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSLEPLC*RRPLCW
Trigger: CCAGCACAAAGGCCGCCTCAAGCACAGAGGCTCCAG...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCGGAGTTTCTTCTaGCGCTTCTGCTCCCGCAAC +
Preference number: 5 (lower is better)
Translates to: SAPAGYPPESVMLTESACLRSFF*RFCSRN
Trigger: GTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCAA...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCCACCAGTACGTGTTATaGTTGGCGCTGGTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: SAPAGYPPESVMLTESACHQYVL*LALVQA
Trigger: TGCCTGCACCAGCGCCAACAATAACACGTACTGGTG...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCATGTACGTGTAGCTGGTaGAGGACATCCCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: VMLTESACLLSQASWPIPCTCSW*RTSLSS
Trigger: ACTGGACAGGGATGTCCTCAACCAGCTACACGTACA...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS TCA 90 bp AATTCAGGAGGGCCATCGATCAGGTCCACTTGGCTGGAAACGACGTaGATCTGCCTCTTTTCCGCTTTCTTCTTCTCCTCTCTCGGAGCT +
Preference number: 5 (lower is better)
Translates to: NSGGPSIRSTWLETT*ICLFSAFFFSSLGA
Trigger: AGCTCCGAGAGAGGAGAAGAAGAAAGCGGAAAAGAGGCAGATTCACGTCGTTTCCAGCCAAGTGGACCTGATCGATGGCCCTCCTGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 90 bp GGAGGCCGTGTATCCCAAGTTAAAAATTCTCCTGCCTTGGTCTGTTaGCCAGGCTGTCTGGAGTTGCATCCCAGTTTCACCATGGACAAG +
Preference number: 5 (lower is better)
Translates to: GGRVSQVKNSPALVC*PGCLELHPSFTMDK
Trigger: CTTGTCCATGGTGAAACTGGGATGCAACTCCAGACAGCCTGGGCAACAGACCAAGGCAGGAGAATTTTTAACTTGGGATACACGGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463221.2
CDS CCA 90 bp GATCTGGTGCTTCTTTTGGGATGCGGGAGTCTCAAGTTGCGTCTGTaGCTTTGTTTCTTTTCCCTCGTCCCTCTTCACTCGCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: DLVLLLGCGSLKLRL*LCFFSLVPLHSQIS
Trigger: GGAGATCTGCGAGTGAAGAGGGACGAGGGAAAAGAAACAAAGCCACAGACGCAACTTGAGACTCCCGCATCCCAAAAGAAGCACCAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000463221.2
CDS CCA 90 bp GATCTGGTGCTTCTTTTGGGATGCGGGAGTCTCAAGTTGCGTCTGTaGCTTTGTTTCTTTTCCCTCGTCCCTCTTCACTCGCAGATCAGC +
Preference number: 5 (lower is better)
Translates to: DLVLLLGCGSLKLRL*LCFFSLVPLHSQIS
Trigger: GCTGATCTGCGAGTGAAGAGGGACGAGGGAAAAGAAACAAAGCCACAGACGCAACTTGAGACTCCCGCATCCCAAAAGAAGCACCAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437955.1
CDS CCA 90 bp TCTTGGTGGGAGGCCGTGTATCCCAAGTTAAAAATTCTCCTGCCTTaGTCTGTTGCCCAGGCTGTCTGGAGTTGCATCCCAGTTTCACCA +
Preference number: 5 (lower is better)
Translates to: SWWEAVYPKLKILLP*SVAQAVWSCIPVSP
Trigger: TGGTGAAACTGGGATGCAACTCCAGACAGCCTGGGCAACAGACCAAGGCAGGAGAATTTTTAACTTGGGATACACGGCCTCCCACCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463221.2
CDS CCA 90 bp CCCAAAGAACTATACAAAGAAGGTCTCCTAGGTGACACCTATCTTTaGTGGGTGATCCTGGTCTCGGGCAGACCAGAGGGAAGGGCAGTT +
Preference number: 5 (lower is better)
Translates to: PKELYKEGLLGDTYL*WVILVSGRPEGRAV
Trigger: AACTGCCCTTCCCTCTGGTCTGCCCGAGACCAGGATCACCCACCAAAGATAGGTGTCACCTAGGAGACCTTCTTTGTATAGTTCTTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479970.1
CDS-3UTR CAA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGCACACACATTTGCCATaGGAGAGGCCGGCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: GKCHLFCATDSLSNVSALHTHLP*ERPAPA
Trigger: GGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGTG...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCAACACTCGACTGCCTTaGCCGAAAGCCTCGCGCTCG +
Preference number: 5 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSNTRLP*PKASRS
Trigger: CGAGCGCGAGGCTTTCGGCAAAGGCAGTCGAGTGTT...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTATCGATCAGGTCCACTaGGCTGGAAACGACGTGAAT +
Preference number: 5 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVIDQVH*AGNDVN
Trigger: ATTCACGTCGTTTCCAGCCAAGTGGACCTGATCGAT...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCAATCGATCAGGTCCACTaGGCTGGAAACGACGTGAAT +
Preference number: 5 (lower is better)
Translates to: VMLTESACLLSQASWPIPIDQVH*AGNDVN
Trigger: ATTCACGTCGTTTCCAGCCAAGTGGACCTGATCGAT...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAAGCGAGCCAGAGCCTaGTGTGCACGTGTGTGTGCG +
Preference number: 5 (lower is better)
Translates to: EVISAPAGYPPESVMLTEKRARA*CARVCA
Trigger: CGCACACACACGTGCACACAAGGCTCTGGCTCGCTT...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTGCAGGGAGAACACAGTaGCGGACAGCAAGCACAGCA +
Preference number: 5 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLAGRTQ*RTASTA
Trigger: TGCTGTGCTTGCTGTCCGCAACTGTGTTCTCCCTGC...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCAGCACCAGGATGATGTaGGGGCGGATGTTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSSTRMM*GRMFLR
Trigger: CCGCAGGAACATCCGCCCCAACATCATCCTGGTGCT...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp AGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGGTGGTCACGAAGGCGTaGATGAAGTGCGCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: RNTRRNGIWTGTEMSTTAVVTKA*MKCAPP
Trigger: GGGCGGGGCGCACTTCATCAACGCCTTCGTGACCAC...CGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CAA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTGTGGTCACGAAGGCGTaGATGAAGTGCGCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPVVTKA*MKCAPP
Trigger: GGGCGGGGCGCACTTCATCAACGCCTTCGTGACCAC...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCTGCGGGTACATCTTCTaGGACGTGCGGAAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVACGYIF*DVRKKL
Trigger: GAGCTTCTTCCGCACGTCCAAGAAGATGTACCCGCA...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTATACGATGTACGTGTaGTCCAGCTCGCCCGTCTCA +
Preference number: 5 (lower is better)
Translates to: SAPAGYPPESVMLTESACYTMYV*SSSPVS
Trigger: TGAGACGGGCGAGCTGGACAACACGTACATCGTATA...GCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp CTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTAGTTTGTCATTGTCTCTCTaGTGTAGCAGCTTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: LSRSLSPFSFVSFWGRVSLSLSL*CSSLPL
Trigger: GAGAGGCAAGCTGCTACACAAGAGAGACAATGACAA...ACTAACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTACTTGGGCACGAGGTaGGAGAGGGCTCTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHYLGTR*ERALLP
Trigger: CGGCAGCAGAGCCCTCTCCAACCTCGTGCCCAAGTA...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CAA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGCAGGCCTGCAGGGACTaGTACAGGTCCAGGTCACAC +
Preference number: 5 (lower is better)
Translates to: EVISAPAGYPPESVMLTEQACRD*YRSRSH
Trigger: GTGTGACCTGGACCTGTACAAGTCCCTGCAGGCCTG...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCCACCTTGTCCTTCTCTaGCAGGCCCTTCCTGAAAGG +
Preference number: 5 (lower is better)
Translates to: YPPESVMLTESACLLSQAHLVLL*QALPER
Trigger: CCTTTCAGGAAGGGCCTGCAAGAGAAGGACAAGGTG...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp ATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGAGGTCCCGCAACAGCCACACCTaGTCCTTCTCTTGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: MVFHCLCSQVMPLCFWRSRNSHT*SFSCRP
Trigger: GGGCCTGCAAGAGAAGGACAAGGTGTGGCTGTTGCG...GGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTGCCACAGAGCGTTTATaGACACCACCACTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVATERL*TPPLLK
Trigger: TTTCAGGAGTGGTGGTGTCAATAAACGCTCTGTGGC...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS CCA 90 bp AAAGCGGGAGTTTTTAAGGAGTCCGACCCACTCCTTCCAGCCGGGTaGCACGTAGGAGCCGTTGTATTCATTAAGATACTTCCCGAAGAA +
Preference number: 5 (lower is better)
Translates to: KAGVFKESDPLLPAG*HVGAVVFIKILPEE
Trigger: TTCTTCGGGAAGTATCTTAATGAATACAACGGCTCCTACGTGCCACCCGGCTGGAAGGAGTGGGTCGGACTCCTTAAAAACTCCCGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359930.8
ENST00000437955.1
ENST00000463221.2
ENST00000467815.5
ENST00000474450.5
ENST00000484875.5
CDS CCA 90 bp GATCTGGTGCTTCTTTTGGGATGCGGGAGTCTCAAGTTGCGTCTGTaGCTTTGTTTCTTTTCCCTCGTCCCTCTTCACTCGCAGATTCGA +
Preference number: 5 (lower is better)
Translates to: DLVLLLGCGSLKLRL*LCFFSLVPLHSQIR
Trigger: TCGAATCTGCGAGTGAAGAGGGACGAGGGAAAAGAAACAAAGCCACAGACGCAACTTGAGACTCCCGCATCCCAAAAGAAGCACCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp ATGTCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTTCCAGCCACACACATTaGCCATTGGAGAGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: MSKVLHTNCWSLAGVLNTSSHTH*PLERPA
Trigger: CGCCGGCCTCTCCAATGGCAAATGTGTGTGGCTGGA...AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CAA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCTCCAGCCACACACATTaGCCATTGGAGAGGCCGGCG +
Preference number: 5 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLSSHTH*PLERPA
Trigger: CGCCGGCCTCTCCAATGGCAAATGTGTGTGGCTGGA...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCATGATGCGCCGGGTCTaGTTCATCACCTGCATGGAA +
Preference number: 5 (lower is better)
Translates to: ATDSLSNVSALFSASPRCMMRRV*FITCME
Trigger: TTCCATGCAGGTGATGAACAAGACCCGGCGCATCAT...GCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGCGGGTACATCTTCTaGGACGTGCGGAAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLCGYIF*DVRKKL
Trigger: GAGCTTCTTCCGCACGTCCAAGAAGATGTACCCGCA...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp AATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTTGTGAGCTTCTGGGGGAGGGTTTGTGCTGAGATGCGTTaGGGAAGAGGCGTGAATATT +
Preference number: 5 (lower is better)
Translates to: NLSRSLSPFSFVSFWGRVCAEMR*GRGVNI
Trigger: AATATTCACGCCTCTTCCCAAACGCATCTCAGCACA...AACCCTCCCCCAGAAGCTCACAAAGGAAAACGGAGAGAGCGAGCGAGAGAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGTCCGTGTCCAGCAGCTaGAGGATGGATTTCCCGTCC +
Preference number: 5 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWSVSSS*RMDFPS
Trigger: GGACGGGAAATCCATCCTCAAGCTGCTGGACACGGA...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TATCCTCCAGAATCTGTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCCTCTTGTGTAGCAGCTaGCCTCTCTCCACCAAGAAG +
Preference number: 5 (lower is better)
Translates to: YPPESVMLTESACLLSQALLCSS*PLSTKK
Trigger: CTTCTTGGTGGAGAGAGGCAAGCTGCTACACAAGAG...GGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGACAGATTCTGGAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCGCGTCCACCTTGTCATaGTCTCTCTTGTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAASTLS*SLLCSS
Trigger: GCTGCTACACAAGAGAGACAATGACAAGGTGGACGC...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCTTCACACGCTGGTACTaGGGCAGAAAGTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVAFTRWY*GRKFSS
Trigger: GGAGGAGAACTTTCTGCCCAAGTACCAGCGTGTGAA...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATTATTGGTCGATGTGCAGCTaGTGGTCTTTCCAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: EPWPVWGIETNVGAFRDYWSMCS*WSFQAC
Trigger: GCAGGCCTGGAAAGACCACAAGCTGCACATCGACCA...ATAATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CAA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGCTGGAGCCTCTGTGCTaGAGGCGGCCTTTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: GKCHLFCATDSLSNVSALLEPLC*RRPLCW
Trigger: CCAGCACAAAGGCCGCCTCAAGCACAGAGGCTCCAG...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTCTGGAGCCTCTGTGCTaGAGGCGGCCTTTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFLEPLC*RRPLCW
Trigger: CCAGCACAAAGGCCGCCTCAAGCACAGAGGCTCCAG...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTTGTTCTGCAGGCGCTaGAGCAGCTTGCGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: CATDSLSNVSALFSASPRLFCRR*SSLRSF
Trigger: GAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACAA...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GTCATGTTGACTGAGAGTGCGTGCTTGCTTTCTCAGGCCTCCTGGCCAATACCATGTGCTACTGACTCATaGTCAAACGTCTCTGCACTG +
Preference number: 5 (lower is better)
Translates to: VMLTESACLLSQASWPIPCATDS*SNVSAL
Trigger: CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA...TGGTATTGGCCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGTCAACATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS CCA 90 bp AAAGAACTATACAAAGAAGGTCTCCTAGGTGACACCTATCTTTGGTaGGTGATCCTGGTCTCGGGCAGACCAGAGGGAAGGGCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: KELYKEGLLGDTYLW*VILVSGRPEGRAVS
Trigger: AGAAACTGCCCTTCCCTCTGGTCTGCCCGAGACCAGGATCACCCACCAAAGATAGGTGTCACCTAGGAGACCTTCTTTGTATAGTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479970.1
CDS-3UTR CAA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCACACACACATTTGCCATaGGAGAGGCCGGCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSHTHLP*ERPAPA
Trigger: GGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGTG...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCCCTCGGCGGAGAGTaGAAACAGATGTGGGATTCG +
Preference number: 5 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLALGGE*KQMWDS
Trigger: CGAATCCCACATCTGTTTCAACTCTCCGCCGAGGGC...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCTGGTCGATGTGCAGCTaGTGGTCTTTCCAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLWSMCS*WSFQAC
Trigger: GCAGGCCTGGAAAGACCACAAGCTGCACATCGACCA...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCGCAACAGCCACACCTaGTCCTTCTCTTGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPRNSHT*SFSCRP
Trigger: GGGCCTGCAAGAGAAGGACAAGGTGTGGCTGTTGCG...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp TCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTGTAAGGCGCTTGAGCAGCTaGCGGAGTTTCTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: SKVLHTNCWSLAGVLNTVRRLSS*RSFFLR
Trigger: GCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCT...TACAGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CAA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACATGCTGCACGTGTCGTaGTTCTGCAGGCGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHMLHVS*FCRRLS
Trigger: GCTCAAGCGCCTGCAGAACAACGACACGTGCAGCAT...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGCAGTACGTGTTATTGTaGGCGCTGGTGCAGGCACAG +
Preference number: 5 (lower is better)
Translates to: EVISAPAGYPPESVMLTEQYVLL*ALVQAQ
Trigger: CTGTGCCTGCACCAGCGCCAACAATAACACGTACTG...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGTACGTGTAGCTGGTaGAGGACATCCCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: CATDSLSNVSALFSASPRCTCSW*RTSLSS
Trigger: ACTGGACAGGGATGTCCTCAACCAGCTACACGTACA...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATACTGAGAGTGCGTGCTaGCTTTCTCAGGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: EMSTTARDFLLHWPQSVYTESAC*LSQASW
Trigger: CCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGT...ATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCACCAACTGCTGGTCATaGGCTGGGGTTTTGAACACT +
Preference number: 5 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVATNCWS*AGVLNT
Trigger: AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGT...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS GCA 90 bp TTAAAAATTCTCCTGCCTTGGTCTGTTGCCCAGGCTGTCTGGAGTTaGATCCCAGTTTCACCATGGACAAGCAGTATGTTCTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: LKILLPWSVAQAVWS*IPVSPWTSSMFLGS
Trigger: AGACCCCAAGAACATACTGCTTGTCCATGGTGAAACTGGGATGCAACTCCAGACAGCCTGGGCAACAGACCAAGGCAGGAGAATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463221.2
CDS CCA 90 bp TTTGTGCTGGGTGTGGTAGCTGATTTTGTGACAGTCACATTCTTCTaGCCGCTTTTTCTTCAGGTGACCTCGGACTTCCCTCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: FVLGVVADFVTVTFF*PLFLQVTSDFPQVL
Trigger: AAGAACCTGAGGGAAGTCCGAGGTCACCTGAAGAAAAAGCGGCCAGAAGAATGTGACTGTCACAAAATCAGCTACCACACCCAGCACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CCA 90 bp GAGGACAATGAAATGAGACGGAATTCCGTGTGTTTCCTGGGCAGTTaGTGCAGGTGTTCCTCTCTCAGGAATCACAGCTTGTTAAAGGTC +
Preference number: 5 (lower is better)
Translates to: EDNEMRRNSVCFLGS*CRCSSLRNHSLLKV
Trigger: GACCTTTAACAAGCTGTGATTCCTGAGAGAGGAACACCTGCACCAACTGCCCAGGAAACACACGGAATTCCGTCTCATTTCATTGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433632.1
CDS CCA 90 bp CCCAAGTTAAAAATTCTCCTGCCTTGGTCTGTTGCCCAGGCTGTCTaGAGTTGCATCCCAGTTTCACCATGGACAAGCAGTATGTTCTTG +
Preference number: 5 (lower is better)
Translates to: PKLKILLPWSVAQAV*SCIPVSPWTSSMFL
Trigger: CAAGAACATACTGCTTGTCCATGGTGAAACTGGGATGCAACTCCAGACAGCCTGGGCAACAGACCAAGGCAGGAGAATTTTTAACTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463221.2
CDS-3UTR CAA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTGCCCTCGGCGGAGAGTaGAAACAGATGTGGGATTCG +
Preference number: 5 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPALGGE*KQMWDS
Trigger: CGAATCCCACATCTGTTTCAACTCTCCGCCGAGGGC...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGGTTGCGTCTGTGGCTTaGTTTCTTTTCCCTCGTCCC +
Preference number: 5 (lower is better)
Translates to: EVISAPAGYPPESVMLTEVASVA*FLFPRP
Trigger: GGGACGAGGGAAAAGAAACAAAGCCACAGACGCAAC...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGTATACGATGTACGTGTaGTCCAGCTCGCCCGTCTCA +
Preference number: 5 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLYTMYV*SSSPVS
Trigger: TGAGACGGGCGAGCTGGACAACACGTACATCGTATA...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGTATACGATGTACGTGTaGTCCAGCTCGCCCGTCTCA +
Preference number: 5 (lower is better)
Translates to: EVISAPAGYPPESVMLTEYTMYV*SSSPVS
Trigger: TGAGACGGGCGAGCTGGACAACACGTACATCGTATA...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATTATCTCTTGTGTAGCAGCTaGCCTCTCTCCACCAAGAAG +
Preference number: 5 (lower is better)
Translates to: EPWPVWGIETNVGAFRDYLLCSS*PLSTKK
Trigger: CTTCTTGGTGGAGAGAGGCAAGCTGCTACACAAGAG...ATAATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CAA 90 bp ACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGTTCACACGCTGGTACTaGGGCAGAAAGTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: THMVFHCLCSQVMPLCFWFTRWY*GRKFSS
Trigger: GGAGGAGAACTTTCTGCCCAAGTACCAGCGTGTGAA...CCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACACCTTGTCCTTCTCTaGCAGGCCCTTCCTGAAAGG +
Preference number: 5 (lower is better)
Translates to: FCATDSLSNVSALFSASPHLVLL*QALPER
Trigger: CCTTTCAGGAAGGGCCTGCAAGAGAAGGACAAGGTG...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTCGCAACAGCCACACCTaGTCCTTCTCTTGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCRNSHT*SFSCRP
Trigger: GGGCCTGCAAGAGAAGGACAAGGTGTGGCTGTTGCG...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCAGGCGCTTGAGCAGCTaGCGGAGTTTCTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRRRLSS*RSFFLR
Trigger: GCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCT...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp AGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGATGCTGCACGTGTCGTaGTTCTGCAGGCGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: RNTRRNGIWTGTEMSTTAMLHVS*FCRRLS
Trigger: GCTCAAGCGCCTGCAGAACAACGACACGTGCAGCAT...CGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GAAATGTCCACAACTGCGAGGGATTTTCTTTTACACTGGCCACAGAGCGTTTATCAGTACGTGTTATTGTaGGCGCTGGTGCAGGCACAG +
Preference number: 5 (lower is better)
Translates to: EMSTTARDFLLHWPQSVYQYVLL*ALVQAQ
Trigger: CTGTGCCTGCACCAGCGCCAACAATAACACGTACTG...ATAAACGCTCTGTGGCCAGTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCACTGAGAGTGCGTGCTaGCTTTCTCAGGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRTESAC*LSQASW
Trigger: CCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGT...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTCCAGAATCTGTCATGTaGACTGAGAGTGCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: CATDSLSNVSALFSASPRPESVM*TESACL
Trigger: CAAGCACGCACTCTCAGTCAACATGACAGATTCTGG...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp AGGGAGCCTTGGCCTGTTTGGGGCATTGAAACAAATGTGGGTGCTTTTAGGGATTGTGCTACTGACTCATaGTCAAACGTCTCTGCACTG +
Preference number: 5 (lower is better)
Translates to: REPWPVWGIETNVGAFRDCATDS*SNVSAL
Trigger: CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA...ATCCCTAAAAGCACCCACATTTGTTTCAATGCCCCAAACAGGCCAAGGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CAA 90 bp CTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTTGCCTGTGCTACTGACTCATaGTCAAACGTCTCTGCACTG +
Preference number: 5 (lower is better)
Translates to: LLTHCQTSLHCFQPLHVACATDS*SNVSAL
Trigger: CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA...GGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTGCCACAGAGCGTTTATaGACACCACCACTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLATERL*TPPLLK
Trigger: TTTCAGGAGTGGTGGTGTCAATAAACGCTCTGTGGC...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS TCA 90 bp GAAAGAAAAAGTCCCCAAAGAACTATACAAAGAAGGTCTCCTAGGTaGCACCTATCTTTGGTGGGTGATCCTGGTCTCGGGCAGACCAGA +
Preference number: 5 (lower is better)
Translates to: ERKSPQRTIQRRSPR*HLSLVGDPGLGQTR
Trigger: TCTGGTCTGCCCGAGACCAGGATCACCCACCAAAGATAGGTGTCACCTAGGAGACCTTCTTTGTATAGTTCTTTGGGGACTTTTTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479970.1
CDS GCA 90 bp GACAATGAAATGAGACGGAATTCCGTGTGTTTCCTGGGCAGTTGGTaGAGGTGTTCCTCTCTCAGGAATCACAGCTTGTTAAAGGTCATC +
Preference number: 5 (lower is better)
Translates to: DNEMRRNSVCFLGSW*RCSSLRNHSLLKVI
Trigger: GATGACCTTTAACAAGCTGTGATTCCTGAGAGAGGAACACCTGCACCAACTGCCCAGGAAACACACGGAATTCCGTCTCATTTCATTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433632.1
CDS-3UTR CAA 90 bp ATGTCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTTGCGGGAGTCTCAAGTaGCGTCTGTGGCTTTGTTTC +
Preference number: 5 (lower is better)
Translates to: MSKVLHTNCWSLAGVLNTCGSLK*RLWLCF
Trigger: GAAACAAAGCCACAGACGCAACTTGAGACTCCCGCA...AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CAA 90 bp TCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTGTAGATCTGGTGCTTCTTTaGGGATGCGGGAGTCTCAAG +
Preference number: 5 (lower is better)
Translates to: SKVLHTNCWSLAGVLNTVDLVLL*GCGSLK
Trigger: CTTGAGACTCCCGCATCCCAAAAGAAGCACCAGATC...TACAGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CAA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCAATGATGCGCCGGGTCTaGTTCATCACCTGCATGGAA +
Preference number: 5 (lower is better)
Translates to: FCATDSLSNVSALFSASPMMRRV*FITCME
Trigger: TTCCATGCAGGTGATGAACAAGACCCGGCGCATCAT...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTGGTTGTGGACGTACTaGCCAGTGAGGATGGAGGAG +
Preference number: 5 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRWLWTY*PVRMEE
Trigger: CTCCTCCATCCTCACTGGCAAGTACGTCCACAACCA...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTGGGGCCAGGTCAATGTaGAGGACGATGTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCGARSM*RTMWGF
Trigger: GAATCCCCACATCGTCCTCAACATTGACCTGGCCCC...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp CAAAGCTGGTATACTATGAGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTTCCGTGTCCAGCAGCTaGAGGATGGATTTCCCGTCC +
Preference number: 5 (lower is better)
Translates to: QSWYTMRLTCSPLKYGRLSVSSS*RMDFPS
Trigger: GGACGGGAAATCCATCCTCAAGCTGCTGGACACGGA...AAGTCTACCATACTTCAAGGGACTACAGGTAAGTCTCATAGTATACCAGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CAA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACTCTTGTGTAGCAGCTaGCCTCTCTCCACCAAGAAG +
Preference number: 5 (lower is better)
Translates to: FCATDSLSNVSALFSASPLLCSS*PLSTKK
Trigger: CTTCTTGGTGGAGAGAGGCAAGCTGCTACACAAGAG...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCACCTTGTCCTTCTCTaGCAGGCCCTTCCTGAAAGG +
Preference number: 5 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPHLVLL*QALPER
Trigger: CCTTTCAGGAAGGGCCTGCAAGAGAAGGACAAGGTG...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGCACCTTGTCCTTCTCTaGCAGGCCCTTCCTGAAAGG +
Preference number: 5 (lower is better)
Translates to: GKCHLFCATDSLSNVSALHLVLL*QALPER
Trigger: CCTTTCAGGAAGGGCCTGCAAGAGAAGGACAAGGTG...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTTTGCGGAGTTTCTTCTaGCGCTTCTGCTCCCGCAAC +
Preference number: 5 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPLRSFF*RFCSRN
Trigger: GTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCAA...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTTGCGGAGTTTCTTCTaGCGCTTCTGCTCCCGCAAC +
Preference number: 5 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRLRSFF*RFCSRN
Trigger: GTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCAA...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTTGTTCTGCAGGCGCTaGAGCAGCTTGCGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRLFCRR*SSLRSF
Trigger: GAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACAA...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCAGTACGTGTTATTGTaGGCGCTGGTGCAGGCACAG +
Preference number: 5 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPQYVLL*ALVQAQ
Trigger: CTGTGCCTGCACCAGCGCCAACAATAACACGTACTG...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp ATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCACCAGTACGTGTTATaGTTGGCGCTGGTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: ISFVLLTHCQTSLHCFQPHQYVL*LALVQA
Trigger: TGCCTGCACCAGCGCCAACAATAACACGTACTGGTG...AGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp TTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCATGTACGTGTAGCTGGTaGAGGACATCCCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: FCATDSLSNVSALFSASPCTCSW*RTSLSS
Trigger: ACTGGACAGGGATGTCCTCAACCAGCTACACGTACA...TGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTACTGAGAGTGCGTGCTaGCTTTCTCAGGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCTESAC*LSQASW
Trigger: CCAGGAGGCCTGAGAAAGCAAGCACGCACTCTCAGT...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGCCAGAATCTGTCATGTaGACTGAGAGTGCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLPESVM*TESACL
Trigger: CAAGCACGCACTCTCAGTCAACATGACAGATTCTGG...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGCCAGAATCTGTCATGTaGACTGAGAGTGCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: EVISAPAGYPPESVMLTEPESVM*TESACL
Trigger: CAAGCACGCACTCTCAGTCAACATGACAGATTCTGG...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGACCAACTGCTGGTCATaGGCTGGGGTTTTGAACACT +
Preference number: 5 (lower is better)
Translates to: EVISAPAGYPPESVMLTETNCWS*AGVLNT
Trigger: AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGT...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp TGGTATACTATGAGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTTTTAGTAGCACCAGGATGATGTaGGGGCGGATGTTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: WYTMRLTCSPLKYGRLFSSTRMM*GRMFLR
Trigger: CCGCAGGAACATCCGCCCCAACATCATCCTGGTGCT...ACTAAAAAGTCTACCATACTTCAAGGGACTACAGGTAAGTCTCATAGTATACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CAA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCATCCGTGTCCAGCAGCTaGAGGATGGATTTCCCGTCC +
Preference number: 5 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSSVSSS*RMDFPS
Trigger: GGACGGGAAATCCATCCTCAAGCTGCTGGACACGGA...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTGCGTCCACCTTGTCATaGTCTCTCTTGTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFASTLS*SLLCSS
Trigger: GCTGCTACACAAGAGAGACAATGACAAGGTGGACGC...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CAA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAAAGCCGCATGGGGCCCTaGCACTTATGCAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKSRMGP*HLCSFS
Trigger: GCTGAAGCTGCATAAGTGCAAGGGCCCCATGCGGCT...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAGGCGCTTGAGCAGCTaGCGGAGTTTCTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSRRLSS*RSFFLR
Trigger: GCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCT...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTCAGTACGTGTTATTGTaGGCGCTGGTGCAGGCACAG +
Preference number: 5 (lower is better)
Translates to: VNVISFVLLTHCQTSLHCQYVLL*ALVQAQ
Trigger: CTGTGCCTGCACCAGCGCCAACAATAACACGTACTG...ACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTGTACGTGTAGCTGGTaGAGGACATCCCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: EMVSGQEQKCPQLRGIFFCTCSW*RTSLSS
Trigger: ACTGGACAGGGATGTCCTCAACCAGCTACACGTACA...AAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp CACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTTGGATGCCTCTATGTTTTaGGAGGTCCACCTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: HPHGFSLPVQSGDASMFLDASMF*EVHLCC
Trigger: ACAACAGAGGTGGACCTCCAAAAACATAGAGGCATC...CAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GAAGTTATCTCTGCTCCTGCTGGTTATCCTCCAGAATCTGTCATGTTGACTGAGTGTGCTACTGACTCATaGTCAAACGTCTCTGCACTG +
Preference number: 5 (lower is better)
Translates to: EVISAPAGYPPESVMLTECATDS*SNVSAL
Trigger: CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA...CTCAGTCAACATGACAGATTCTGGAGGATAACCAGCAGGAGCAGAGATAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCACCAACTGCTGGTCATaGGCTGGGGTTTTGAACACT +
Preference number: 5 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLTNCWS*AGVLNT
Trigger: AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGT...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp AATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGGCCTGTTTGGGGCATaGAAACAAATGTGGGTGCTT +
Preference number: 5 (lower is better)
Translates to: NSNDFRPWEKFPRKSLSLGLFGA*KQMWVL
Trigger: AAGCACCCACATTTGTTTCAATGCCCCAAACAGGCC...GAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS TCA 90 bp TGCTGGAAATCACCCACATGGTTTTTCATTGCCTGTGCAGTCAGGTaGTGCCTCTATGTTTTTGGAGGTCCACCTCTGTTGTTTCTTAAC +
Preference number: 5 (lower is better)
Translates to: CWKSPTWFFIACAVR*CLYVFGGPPLLFLN
Trigger: GTTAAGAAACAACAGAGGTGGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGAAAAACCATGTGGGTGATTTCCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000479970.1
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp CAAAGCTGGTATACTATGAGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTGTTGCGTCTGTGGCTTaGTTTCTTTTCCCTCGTCCC +
Preference number: 5 (lower is better)
Translates to: QSWYTMRLTCSPLKYGRLVASVA*FLFPRP
Trigger: GGGACGAGGGAAAAGAAACAAAGCCACAGACGCAAC...AAGTCTACCATACTTCAAGGGACTACAGGTAAGTCTCATAGTATACCAGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CAA 90 bp CAAAGCTGGTATACTATGAGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTGATCTGGTGCTTCTTTaGGGATGCGGGAGTCTCAAG +
Preference number: 5 (lower is better)
Translates to: QSWYTMRLTCSPLKYGRLDLVLL*GCGSLK
Trigger: CTTGAGACTCCCGCATCCCAAAAGAAGCACCAGATC...AAGTCTACCATACTTCAAGGGACTACAGGTAAGTCTCATAGTATACCAGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CAA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAAGCAGGGAGAACACAGTaGCGGACAGCAAGCACAGCA +
Preference number: 5 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKAGRTQ*RTASTA
Trigger: TGCTGTGCTTGCTGTCCGCAACTGTGTTCTCCCTGC...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTGTATTGTCATTGTCTCTCTaGTGTAGCAGCTTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: SKVLHTNCWSLAGVLNTVLSLSL*CSSLPL
Trigger: GAGAGGCAAGCTGCTACACAAGAGAGACAATGACAA...TACAGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CAA 90 bp AGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTTTTAGTCAATCTACAACCTTGCGGAGTTTCTTCTaGCGCTTCTGCTCCCGCAAC +
Preference number: 5 (lower is better)
Translates to: RLTCSPLKYGRLFSQSTTLRSFF*RFCSRN
Trigger: GTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCAA...GGTTGTAGATTGACTAAAAAGTCTACCATACTTCAAGGGACTACAGGTAAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CAA 90 bp TGGTATACTATGAGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTTTTAGTATGCTGCACGTGTCGTaGTTCTGCAGGCGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: WYTMRLTCSPLKYGRLFSMLHVS*FCRRLS
Trigger: GCTCAAGCGCCTGCAGAACAACGACACGTGCAGCAT...ACTAAAAAGTCTACCATACTTCAAGGGACTACAGGTAAGTCTCATAGTATACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CAA 90 bp AGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGCCAGAATCTGTCATGTaGACTGAGAGTGCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: RNTRRNGIWTGTEMSTTAPESVM*TESACL
Trigger: CAAGCACGCACTCTCAGTCAACATGACAGATTCTGG...CGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp AAAATTCCAATGACTTTCGCCCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCGCCACAGAGCGTTTATaGACACCACCACTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: KIPMTFALGRNFQGNLSRATERL*TPPLLK
Trigger: TTTCAGGAGTGGTGGTGTCAATAAACGCTCTGTGGC...GCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGGGCGAAAGTCATTGGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp TCAGTTCTGGGACATAACAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAATGCGGGAGTCTCAAGTaGCGTCTGTGGCTTTGTTTC +
Preference number: 5 (lower is better)
Translates to: SVLGHNKEILGEMVSGQECGSLK*RLWLCF
Trigger: GAAACAAAGCCACAGACGCAACTTGAGACTCCCGCA...TTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTGTTATGTCCCAGAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CAA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAATGATGCGCCGGGTCTaGTTCATCACCTGCATGGAA +
Preference number: 5 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSMMRRV*FITCME
Trigger: TTCCATGCAGGTGATGAACAAGACCCGGCGCATCAT...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp AGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGTGTGCTGAGATGCGTTaGGGAAGAGGCGTGAATATT +
Preference number: 5 (lower is better)
Translates to: RNTRRNGIWTGTEMSTTACAEMR*GRGVNI
Trigger: AATATTCACGCCTCTTCCCAAACGCATCTCAGCACA...CGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CAA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTGTCATTGTCTCTCTaGTGTAGCAGCTTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: GKCHLFCATDSLSNVSALLSLSL*CSSLPL
Trigger: GAGAGGCAAGCTGCTACACAAGAGAGACAATGACAA...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGTCCACCTTGTCATaGTCTCTCTTGTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTASTLS*SLLCSS
Trigger: GCTGCTACACAAGAGAGACAATGACAAGGTGGACGC...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CAA 90 bp TGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGTTTTCAGCCTCTCCACGTCTCAGGTTCTTAATTTaGTTCTGCAGGGTTTCAATC +
Preference number: 5 (lower is better)
Translates to: CATDSLSNVSALFSASPRLRFLI*FCRVSI
Trigger: GATTGAAACCCTGCAGAACAAAATTAAGAACCTGAG...ACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp CCTTGGGAGAAATTTCCAAGGAAATCTCTCTCGCTCGCTCTCTCCGTTTTCCTTCTCAGGTTCTTAATTTaGTTCTGCAGGGTTTCAATC +
Preference number: 5 (lower is better)
Translates to: PWEKFPRKSLSLALSVFLLRFLI*FCRVSI
Trigger: GATTGAAACCCTGCAGAACAAAATTAAGAACCTGAG...AAGGAAAACGGAGAGAGCGAGCGAGAGAGATTTCCTTGGAAATTTCTCCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAATTGTTCTGCAGGCGCTaGAGCAGCTTGCGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKLFCRR*SSLRSF
Trigger: GAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACAA...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAACACCAGTACGTGTTATaGTTGGCGCTGGTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKHQYVL*LALVQA
Trigger: TGCCTGCACCAGCGCCAACAATAACACGTACTGGTG...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAAACGTCTCTGCACTGGATGCCTCTATGTTTTaGGAGGTCCACCTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: GKCHLFCATDSLSNVSALDASMF*EVHLCC
Trigger: ACAACAGAGGTGGACCTCCAAAAACATAGAGGCATC...CAGTGCAGAGACGTTTGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp CAAAGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTCCAGCCTTCCCACAGTaGTCCCCTGTATTGCTCATA +
Preference number: 5 (lower is better)
Translates to: QRNTRRNGIWTGTEMSTTPAFPQ*SPVLLI
Trigger: TATGAGCAATACAGGGGACAACTGTGGGAAGGCTGG...AGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495544.5
CDS-3UTR CAA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAAGATCTGGTGCTTCTTTaGGGATGCGGGAGTCTCAAG +
Preference number: 5 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKDLVLL*GCGSLK
Trigger: CTTGAGACTCCCGCATCCCAAAAGAAGCACCAGATC...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp TTTATTGACACCACCACTCCTGAAAATTGGGATTTCTTATTAGGTTCCCCTAAATTCACACGCTGGTACTaGGGCAGAAAGTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FIDTTTPENWDFLLGSPKFTRWY*GRKFSS
Trigger: GGAGGAGAACTTTCTGCCCAAGTACCAGCGTGTGAA...TTTAGGGGAACCTAATAAGAAATCCCAATTTTCAGGAGTGGTGGTGTCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS-3UTR CAA 90 bp GGGTTTATAGTGCTAGGTAAATGTCATCTCTTTTGTGCTACTGACTCATTGTCAGCCACAGAGCGTTTATaGACACCACCACTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: GFIVLGKCHLFCATDSLSATERL*TPPLLK
Trigger: TTTCAGGAGTGGTGGTGTCAATAAACGCTCTGTGGC...TGACAATGAGTCAGTAGCACAAAAGAGATGACATTTACCTAGCACTATAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS-3UTR CAA 90 bp GGTATCTGGACAGGAACAGAAATGTCCACAACTGCGAGGGATTTTCTTTTACACCTCAGGTTCTTAATTTaGTTCTGCAGGGTTTCAATC +
Preference number: 5 (lower is better)
Translates to: GIWTGTEMSTTARDFLLHLRFLI*FCRVSI
Trigger: GATTGAAACCCTGCAGAACAAAATTAAGAACCTGAG...GTGTAAAAGAAAATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000484875.5
CDS-3UTR CAA 90 bp AGAAATACTAGGAGAAATGGTATCTGGACAGGAACAGAAATGTCCACAACTGCGCTTACCTGTAGTCCCTaGAAGTATGGTAGACTTTTT +
Preference number: 5 (lower is better)
Translates to: RNTRRNGIWTGTEMSTTALTCSP*KYGRLF
Trigger: AAAAAGTCTACCATACTTCAAGGGACTACAGGTAAG...CGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCCTAGTATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CAA 90 bp CAAAGCTGGTATACTATGAGACTTACCTGTAGTCCCTTGAAGTATGGTAGACTTATACACAAAGAAGGGTaGGCCAAGGCGAATTTCTTT +
Preference number: 5 (lower is better)
Translates to: QSWYTMRLTCSPLKYGRLIHKEG*AKANFF
Trigger: AAAGAAATTCGCCTTGGCCAACCCTTCTTTGTGTAT...AAGTCTACCATACTTCAAGGGACTACAGGTAAGTCTCATAGTATACCAGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS-3UTR CAA 90 bp ATGTCAAAGGTTCTTCATACCAACTGCTGGTCATTGGCTGGGGTTTTGAACACTAAATCTGTCAACTACTaGTATCAGGTTAGACTACCT +
Preference number: 5 (lower is better)
Translates to: MSKVLHTNCWSLAGVLNTKSVNY*YQVRLP
Trigger: AGGTAGTCTAACCTGATACAAGTAGTTGACAGATTT...AGTGTTCAAAACCCCAGCCAATGACCAGCAGTTGGTATGAAGAACCTTTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS CAA 72 bp GCCGAAAGCCTCGCGCTCGCCTCCAGCCACACACATTaGCCATTGGAGAGGCCGGCGCCGGCCGCGACCCGC +
Preference number: 6 (lower is better)
Translates to: AESLALASSHTH*PLERPAPAATR
Trigger: GCGGGTCGCGGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGTGGCTGGAGGCGAGCGCGAGGCTTTCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp CCGAAAGCCTCGCGCTCGCCTCCAGCCACACACATTTaGCATTGGAGAGGCCGGCGCCGGCCGCGACCCGCA +
Preference number: 6 (lower is better)
Translates to: PKASRSPPATHI*HWRGRRRPRPA
Trigger: TGCGGGTCGCGGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGTGGCTGGAGGCGAGCGCGAGGCTTTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CCA 72 bp GCCTCGCGCTCGCCTCCAGCCACACACATTTGCCATTaGAGAGGCCGGCGCCGGCCGCGACCCGCAGCTCAA +
Preference number: 6 (lower is better)
Translates to: ASRSPPATHICH*RGRRRPRPAAQ
Trigger: TTGAGCTGCGGGTCGCGGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGTGGCTGGAGGCGAGCGCGAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CCA 72 bp CCTCGCTGCCCTGCCCGTAGTACTTGGGCACGAGGTTaGAGAGGGCTCTGCTGCCGCCCAGCCGCATGGGGC +
Preference number: 6 (lower is better)
Translates to: PRCPARSTWARG*RGLCCRPAAWG
Trigger: GCCCCATGCGGCTGGGCGGCAGCAGAGCCCTCTCCAACCTCGTGCCCAAGTACTACGGGCAGGGCAGCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000465769.1
ENST00000467815.5
ENST00000484875.5
CDS CAA 72 bp AGCCTCGCGCTCGCCTCCAGCCACACACATTTGCCATaGGAGAGGCCGGCGCCGGCCGCGACCCGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: SLALASSHTHLP*ERPAPAATRSS
Trigger: TGAGCTGCGGGTCGCGGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGTGGCTGGAGGCGAGCGCGAGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CAA 90 bp TTTGCCGAAAGCCTCGCGCTCGCCTCCAGCCACACACATTTGCCATaGGAGAGGCCGGCGCCGGCCGCGACCCGCAGCTCAATCGCAGGG +
Preference number: 6 (lower is better)
Translates to: FAESLALASSHTHLP*ERPAPAATRSSIAG
Trigger: CCCTGCGATTGAGCTGCGGGTCGCGGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGTGGCTGGAGGCGAGCGCGAGGCTTTCGGCAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp GCTGGGCGGCATCACCCAGGCCTACGTGGTACACCCTaGCGTCCACCTCGATGGCCACTGAGCGGATGGAGC +
Preference number: 6 (lower is better)
Translates to: AGRHHPGLRGTP*RPPRWPLSGWS
Trigger: GCTCCATCCGCTCAGTGGCCATCGAGGTGGACGGCAGGGTGTACCACGTAGGCCTGGGTGATGCCGCCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CCA 72 bp CACAGGTGCAGGCCTCGCTGCCCTGCCCGTAGTACTTaGGCACGAGGTTGGAGAGGGCTCTGCTGCCGCCCA +
Preference number: 6 (lower is better)
Translates to: HRCRPRCPARST*ARGWRGLCCRP
Trigger: TGGGCGGCAGCAGAGCCCTCTCCAACCTCGTGCCCAAGTACTACGGGCAGGGCAGCGAGGCCTGCACCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000465769.1
ENST00000467815.5
ENST00000484875.5
CDS CAA 72 bp GAGAGGGCTCTGCTGCCGCCCAGCCGCATGGGGCCCTaGCACTTATGCAGCTTCAGCTTCCCCGTGGCGTCC +
Preference number: 6 (lower is better)
Translates to: ERALLPPSRMGP*HLCSFSFPVAS
Trigger: GGACGCCACGGGGAAGCTGAAGCTGCATAAGTGCAAGGGCCCCATGCGGCTGGGCGGCAGCAGAGCCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000465769.1
ENST00000467815.5
ENST00000484875.5
CDS CAA 90 bp ACTGCCTTTGCCGAAAGCCTCGCGCTCGCCTCCAGCCACACACATTaGCCATTGGAGAGGCCGGCGCCGGCCGCGACCCGCAGCTCAATC +
Preference number: 6 (lower is better)
Translates to: TAFAESLALASSHTH*PLERPAPAATRSSI
Trigger: GATTGAGCTGCGGGTCGCGGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGTGGCTGGAGGCGAGCGCGAGGCTTTCGGCAAAGGCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp CTGCTGCCGCCCAGCCGCATGGGGCCCTTGCACTTATaGAGCTTCAGCTTCCCCGTGGCGTCCTCCACACAC +
Preference number: 6 (lower is better)
Translates to: LLPPSRMGPLHL*SFSFPVASSTH
Trigger: GTGTGTGGAGGACGCCACGGGGAAGCTGAAGCTGCATAAGTGCAAGGGCCCCATGCGGCTGGGCGGCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000465769.1
ENST00000467815.5
ENST00000484875.5
CDS CAA 90 bp ACGAGGTTGGAGAGGGCTCTGCTGCCGCCCAGCCGCATGGGGCCCTaGCACTTATGCAGCTTCAGCTTCCCCGTGGCGTCCTCCACACAC +
Preference number: 6 (lower is better)
Translates to: TRLERALLPPSRMGP*HLCSFSFPVASSTH
Trigger: GTGTGTGGAGGACGCCACGGGGAAGCTGAAGCTGCATAAGTGCAAGGGCCCCATGCGGCTGGGCGGCAGCAGAGCCCTCTCCAACCTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000465769.1
ENST00000467815.5
ENST00000484875.5
CDS CCA 72 bp CCAGGCCTACGTGGTACACCCTGCCGTCCACCTCGATaGCCACTGAGCGGATGGAGCGACTGCGGACATAGC +
Preference number: 6 (lower is better)
Translates to: PGLRGTPCRPPR*PLSGWSDCGHS
Trigger: GCTATGTCCGCAGTCGCTCCATCCGCTCAGTGGCCATCGAGGTGGACGGCAGGGTGTACCACGTAGGCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CAA 72 bp CAGGACTCGCCCCGGTCTGCAAACACTCGACTGCCTTaGCCGAAAGCCTCGCGCTCGCCTCCAGCCACACAC +
Preference number: 6 (lower is better)
Translates to: QDSPRSANTRLP*PKASRSPPATH
Trigger: GTGTGTGGCTGGAGGCGAGCGCGAGGCTTTCGGCAAAGGCAGTCGAGTGTTTGCAGACCGGGGCGAGTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp AGGACTCGCCCCGGTCTGCAAACACTCGACTGCCTTTaGCGAAAGCCTCGCGCTCGCCTCCAGCCACACACA +
Preference number: 6 (lower is better)
Translates to: RTRPGLQTLDCL*RKPRARLQPHT
Trigger: TGTGTGTGGCTGGAGGCGAGCGCGAGGCTTTCGGCAAAGGCAGTCGAGTGTTTGCAGACCGGGGCGAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp GCTTGTAGTCCCCGCTGTCACAGGTGCAGGCCTCGCTaGCCTGCCCGTAGTACTTGGGCACGAGGTTGGAGA +
Preference number: 6 (lower is better)
Translates to: ACSPRCHRCRPR*PARSTWARGWR
Trigger: TCTCCAACCTCGTGCCCAAGTACTACGGGCAGGGCAGCGAGGCCTGCACCTGTGACAGCGGGGACTACAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000465769.1
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp AAAGGCCCCAGTGTCCAGAAAGGCGCCGTCTGCCAGTaGTGGTTGTCGTGGGTGAAGCACGTGAGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: KGPSVQKGAVCQ*WLSWVKHVRPG
Trigger: GCCAGGCCTCACGTGCTTCACCCACGACAACCAGCACTGGCAGACGGCGCCTTTCTGGACACTGGGGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359930.8
ENST00000433632.1
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS TCA 72 bp TACGTGGTACACCCTGCCGTCCACCTCGATGGCCACTaGGCGGATGGAGCGACTGCGGACATAGCTGGCCTT +
Preference number: 6 (lower is better)
Translates to: YVVHPAVHLDGH*ADGATADIAGL
Trigger: AAGGCCAGCTATGTCCGCAGTCGCTCCATCCGCTCAGTGGCCATCGAGGTGGACGGCAGGGTGTACCACGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp TTTCACAGGACTCGCCCCGGTCTGCAAACACTCGACTaGCTTTGCCGAAAGCCTCGCGCTCGCCTCCAGCCA +
Preference number: 6 (lower is better)
Translates to: FHRTRPGLQTLD*LCRKPRARLQP
Trigger: TGGCTGGAGGCGAGCGCGAGGCTTTCGGCAAAGGCAGTCGAGTGTTTGCAGACCGGGGCGAGTCCTGTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp GTGGTCACGAAGGCGTTGATGAAGTGCGCCCCGCCCTaGTCCATGATGCGCCGGGTCTTGTTCATCACCTGC +
Preference number: 6 (lower is better)
Translates to: VVTKALMKCAPP*SMMRRVLFITC
Trigger: GCAGGTGATGAACAAGACCCGGCGCATCATGGAGCAGGGCGGGGCGCACTTCATCAACGCCTTCGTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359930.8
ENST00000437955.1
ENST00000463221.2
ENST00000467815.5
ENST00000478766.1
ENST00000484875.5
CDS GCA 72 bp GCACAGAAAGGCCCCAGTGTCCAGAAAGGCGCCGTCTaGCAGTGCTGGTTGTCGTGGGTGAAGCACGTGAGG +
Preference number: 6 (lower is better)
Translates to: AQKGPSVQKGAV*QCWLSWVKHVR
Trigger: CCTCACGTGCTTCACCCACGACAACCAGCACTGGCAGACGGCGCCTTTCTGGACACTGGGGCCTTTCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359930.8
ENST00000433632.1
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS CAA 72 bp AAGTGCGCCCCGCCCTGCTCCATGATGCGCCGGGTCTaGTTCATCACCTGCATGGAACCCAGCTCCACATCC +
Preference number: 6 (lower is better)
Translates to: KCAPPCSMMRRV*FITCMEPSSTS
Trigger: GGATGTGGAGCTGGGTTCCATGCAGGTGATGAACAAGACCCGGCGCATCATGGAGCAGGGCGGGGCGCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359930.8
ENST00000437955.1
ENST00000463221.2
ENST00000467815.5
ENST00000484875.5
CDS CAA 90 bp CACTCACTCGACACACTCTCGCTCCTGCTCGCCCTCGGCGGAGAGTaGAAACAGATGTGGGATTCGCCCAGGAGCTGGAAACGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: HSLDTLSLLLALGGE*KQMWDSPRSWKRGR
Trigger: CCTCCCTCGTTTCCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTCTCCGCCGAGGGCGAGCAGGAGCGAGAGTGTGTCGAGTGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359930.8
CDS CAA 90 bp CGCAGATTCGACACACTCTCGCTCCTGCTCGCCCTCGGCGGAGAGTaGAAACAGATGTGGGATTCGCCCAGGAGCTGGAAACGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: RRFDTLSLLLALGGE*KQMWDSPRSWKRGR
Trigger: CCTCCCTCGTTTCCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTCTCCGCCGAGGGCGAGCAGGAGCGAGAGTGTGTCGAATCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467815.5
ENST00000484875.5
CDS CCA 72 bp CTCCTGCTCGCCCTCGGCGGAGAGTTGAAACAGATGTaGGATTCGCCCAGGAGCTGGAAACGAGGGAGGGAA +
Preference number: 6 (lower is better)
Translates to: LLLALGGELKQM*DSPRSWKRGRE
Trigger: TTCCCTCCCTCGTTTCCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTCTCCGCCGAGGGCGAGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CCA 72 bp ACACCCTGCCGTCCACCTCGATGGCCACTGAGCGGATaGAGCGACTGCGGACATAGCTGGCCTTGTACTTCT +
Preference number: 6 (lower is better)
Translates to: TPCRPPRWPLSG*SDCGHSWPCTS
Trigger: AGAAGTACAAGGCCAGCTATGTCCGCAGTCGCTCCATCCGCTCAGTGGCCATCGAGGTGGACGGCAGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CAA 90 bp CTGCTTTCACAGGACTCGCCCCGGTCTGCAAACACTCGACTGCCTTaGCCGAAAGCCTCGCGCTCGCCTCCAGCCACACACATTTGCCAT +
Preference number: 6 (lower is better)
Translates to: LLSQDSPRSANTRLP*PKASRSPPATHICH
Trigger: ATGGCAAATGTGTGTGGCTGGAGGCGAGCGCGAGGCTTTCGGCAAAGGCAGTCGAGTGTTTGCAGACCGGGGCGAGTCCTGTGAAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CAA 90 bp CCTGGCATGCTGCACGTGTCGTTGTTCTGCAGGCGCTTGAGCAGCTaGCGGAGTTTCTTCTTGCGCTTCTGCTCCCGCAACAGCCACACC +
Preference number: 6 (lower is better)
Translates to: PGMLHVSLFCRRLSS*RSFFLRFCSRNSHT
Trigger: GGTGTGGCTGTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACAACGACACGTGCAGCATGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS CAA 90 bp CACGTGAGGCCTGGCATGCTGCACGTGTCGTTGTTCTGCAGGCGCTaGAGCAGCTTGCGGAGTTTCTTCTTGCGCTTCTGCTCCCGCAAC +
Preference number: 6 (lower is better)
Translates to: HVRPGMLHVSLFCRR*SSLRSFFLRFCSRN
Trigger: GTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACAACGACACGTGCAGCATGCCAGGCCTCACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS CAA 90 bp GGCAGAAAGTTCTCCTCCTGGGCGTCCACCTTGTCATTGTCTCTCTaGTGTAGCAGCTTGCTATGGGGCAGAGAGCAGGAGCCGCGGGGC +
Preference number: 6 (lower is better)
Translates to: GRKFSSWASTLSLSL*CSSLLWGREQEPRG
Trigger: GCCCCGCGGCTCCTGCTCTCTGCCCCATAGCAAGCTGCTACACAAGAGAGACAATGACAAGGTGGACGCCCAGGAGGAGAACTTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465769.1
CDS TCA 72 bp ACACACTCTCGCTCCTGCTCGCCCTCGGCGGAGAGTTaGAACAGATGTGGGATTCGCCCAGGAGCTGGAAAC +
Preference number: 6 (lower is better)
Translates to: THSRSCSPSAES*NRCGIRPGAGN
Trigger: GTTTCCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTCTCCGCCGAGGGCGAGCAGGAGCGAGAGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS TCA 72 bp AGGATGATGTTGGGGCGGATGTTCCTGCGGTCCCTCTaGAACCTGCCTTTCAGGCGGTGGTGCGACAGGAAG +
Preference number: 6 (lower is better)
Translates to: RMMLGRMFLRSL*NLPFRRWCDRK
Trigger: CTTCCTGTCGCACCACCGCCTGAAAGGCAGGTTTCAGAGGGACCGCAGGAACATCCGCCCCAACATCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359930.8
ENST00000437955.1
ENST00000463221.2
ENST00000467815.5
ENST00000474450.5
ENST00000484875.5
CDS GCA 72 bp TGGAAACGAGGGAGGGAAGCGAGCCAGAGCCTTGTGTaGACGTGTGTGTGCGTAACACACAAACCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: WKRGREASQSLV*TCVCVTHKPGG
Trigger: GCCCCCTGGTTTGTGTGTTACGCACACACACGTGCACACAAGGCTCTGGCTCGCTTCCCTCCCTCGTTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CAA 72 bp GACACACTCTCGCTCCTGCTCGCCCTCGGCGGAGAGTaGAAACAGATGTGGGATTCGCCCAGGAGCTGGAAA +
Preference number: 6 (lower is better)
Translates to: DTLSLLLALGGE*KQMWDSPRSWK
Trigger: TTTCCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTCTCCGCCGAGGGCGAGCAGGAGCGAGAGTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CAA 72 bp CCTGCAATGTCCAGGATGGTGGGGGCCAGGTCAATGTaGAGGACGATGTGGGGATTCAGACAGCCGGCTTCC +
Preference number: 6 (lower is better)
Translates to: PAMSRMVGARSM*RTMWGFRQPAS
Trigger: GGAAGCCGGCTGTCTGAATCCCCACATCGTCCTCAACATTGACCTGGCCCCCACCATCCTGGACATTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CAA 72 bp GTGAAGCACGTGAGGCCTGGCATGCTGCACGTGTCGTaGTTCTGCAGGCGCTTGAGCAGCTTGCGGAGTTTC +
Preference number: 6 (lower is better)
Translates to: VKHVRPGMLHVS*FCRRLSSLRSF
Trigger: GAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACAACGACACGTGCAGCATGCCAGGCCTCACGTGCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS CAA 90 bp TTGTCGTGGGTGAAGCACGTGAGGCCTGGCATGCTGCACGTGTCGTaGTTCTGCAGGCGCTTGAGCAGCTTGCGGAGTTTCTTCTTGCGC +
Preference number: 6 (lower is better)
Translates to: LSWVKHVRPGMLHVS*FCRRLSSLRSFFLR
Trigger: GCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACAACGACACGTGCAGCATGCCAGGCCTCACGTGCTTCACCCACGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS TCA 72 bp CTGCAATGTCCAGGATGGTGGGGGCCAGGTCAATGTTaGGGACGATGTGGGGATTCAGACAGCCGGCTTCCA +
Preference number: 6 (lower is better)
Translates to: LQCPGWWGPGQC*GRCGDSDSRLP
Trigger: TGGAAGCCGGCTGTCTGAATCCCCACATCGTCCTCAACATTGACCTGGCCCCCACCATCCTGGACATTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp CACGTGAGGCCTGGCATGCTGCACGTGTCGTTGTTCTaGAGGCGCTTGAGCAGCTTGCGGAGTTTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: HVRPGMLHVSLF*RRLSSLRSFFL
Trigger: CAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACAACGACACGTGCAGCATGCCAGGCCTCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS CCA 72 bp GGAGAGTTGAAACAGATGTGGGATTCGCCCAGGAGCTaGAAACGAGGGAGGGAAGCGAGCCAGAGCCTTGTG +
Preference number: 6 (lower is better)
Translates to: GELKQMWDSPRS*KRGREASQSLV
Trigger: CACAAGGCTCTGGCTCGCTTCCCTCCCTCGTTTCCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CAA 72 bp TTCTGCAGGCGCTTGAGCAGCTTGCGGAGTTTCTTCTaGCGCTTCTGCTCCCGCAACAGCCACACCTTGTCC +
Preference number: 6 (lower is better)
Translates to: FCRRLSSLRSFF*RFCSRNSHTLS
Trigger: GGACAAGGTGTGGCTGTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS CAA 72 bp CTGCACGTGTCGTTGTTCTGCAGGCGCTTGAGCAGCTaGCGGAGTTTCTTCTTGCGCTTCTGCTCCCGCAAC +
Preference number: 6 (lower is better)
Translates to: LHVSLFCRRLSS*RSFFLRFCSRN
Trigger: GTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACAACGACACGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS CAA 72 bp CCTGGCATGCTGCACGTGTCGTTGTTCTGCAGGCGCTaGAGCAGCTTGCGGAGTTTCTTCTTGCGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: PGMLHVSLFCRR*SSLRSFFLRFC
Trigger: GCAGAAGCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACAACGACACGTGCAGCATGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS CAA 90 bp GTGTCGTTGTTCTGCAGGCGCTTGAGCAGCTTGCGGAGTTTCTTCTaGCGCTTCTGCTCCCGCAACAGCCACACCTTGTCCTTCTCTTGC +
Preference number: 6 (lower is better)
Translates to: VSLFCRRLSSLRSFF*RFCSRNSHTLSFSC
Trigger: GCAAGAGAAGGACAAGGTGTGGCTGTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACAACGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS TCA 72 bp ACTTCCCGAAGAAAGCTGTCCGGTAGCCAGTGCTATTaGGGTACACGGCAAAGGTGCGGCTCTCGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: TSRRKLSGSQCY*GTRQRCGSRAV
Trigger: CACAGCACGAGAGCCGCACCTTTGCCGTGTACCTCAATAGCACTGGCTACCGGACAGCTTTCTTCGGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359930.8
ENST00000437955.1
ENST00000463221.2
ENST00000467815.5
ENST00000484875.5
CDS TCA 72 bp GAAACCGATTCACCGGCCGCTCCGTGTCCAGCAGCTTaGGGATGGATTTCCCGTCCATATCCGCAGGTATGT +
Preference number: 6 (lower is better)
Translates to: ETDSPAAPCPAA*GWISRPYPQVC
Trigger: ACATACCTGCGGATATGGACGGGAAATCCATCCTCAAGCTGCTGGACACGGAGCGGCCGGTGAATCGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS TCA 72 bp CTGGCATGCTGCACGTGTCGTTGTTCTGCAGGCGCTTaGGCAGCTTGCGGAGTTTCTTCTTGCGCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: LACCTCRCSAGA*AACGVSSCASA
Trigger: AGCAGAAGCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCGCCTGCAGAACAACGACACGTGCAGCATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS GCA 72 bp ATCGTCTCCATGGAGTCGTCCACCGACATGAGGGTCTaGAAGCGCTTCCGCTGGAGCATGTTGGTGAATTCC +
Preference number: 6 (lower is better)
Translates to: IVSMESSTDMRV*KRFRWSMLVNS
Trigger: GGAATTCACCAACATGCTCCAGCGGAAGCGCTTGCAGACCCTCATGTCGGTGGACGACTCCATGGAGACGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp TCGTGGTCGATGTGCAGCTTGTGGTCTTTCCAGGCCTaGAGGGACTTGTACAGGTCCAGGTCACACTGGACT +
Preference number: 6 (lower is better)
Translates to: SWSMCSLWSFQA*RDLYRSRSHWT
Trigger: AGTCCAGTGTGACCTGGACCTGTACAAGTCCCTGCAGGCCTGGAAAGACCACAAGCTGCACATCGACCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp CGCTTGAGCAGCTTGCGGAGTTTCTTCTTGCGCTTCTaGTCCCGCAACAGCCACACCTTGTCCTTCTCTTGC +
Preference number: 6 (lower is better)
Translates to: RLSSLRSFFLRF*SRNSHTLSFSC
Trigger: GCAAGAGAAGGACAAGGTGTGGCTGTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCAAGCTGCTCAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
ENST00000495544.5
CDS GCA 72 bp CTTGTCCTGTCTGCGCGGGGAGGAGAGGTGTGGACCTaGATCAGTGGGAAGTCTGTCACACTCTGGAGTTTA +
Preference number: 6 (lower is better)
Translates to: LVLSARGGEVWT*ISGKSVTLWSL
Trigger: TAAACTCCAGAGTGTGACAGACTTCCCACTGATGCAGGTCCACACCTCTCCTCCCCGCGCAGACAGGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478766.1
CDS CAA 90 bp TCGTGGTCGATGTGCAGCTTGTGGTCTTTCCAGGCCTGCAGGGACTaGTACAGGTCCAGGTCACACTGGACTGTGTCGTTCTCTAGGATG +
Preference number: 6 (lower is better)
Translates to: SWSMCSLWSFQACRD*YRSRSHWTVSFSRM
Trigger: CATCCTAGAGAACGACACAGTCCAGTGTGACCTGGACCTGTACAAGTCCCTGCAGGCCTGGAAAGACCACAAGCTGCACATCGACCACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS TCA 72 bp TGTTGTAAATCGTCTCCATGGAGTCGTCCACCGACATaGGGGTCTGCAAGCGCTTCCGCTGGAGCATGTTGG +
Preference number: 6 (lower is better)
Translates to: CCKSSPWSRPPT*GSASASAGACW
Trigger: CCAACATGCTCCAGCGGAAGCGCTTGCAGACCCTCATGTCGGTGGACGACTCCATGGAGACGATTTACAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp AGGTCCATTGGCTGTGGTTTGCTGACCCCTAGCATGTaGCTAGTGGATTTGAAGGGCCGAAGTGGGCATGCA +
Preference number: 6 (lower is better)
Translates to: RSIGCGLLTPSM*LVDLKGRSGHA
Trigger: TGCATGCCCACTTCGGCCCTTCAAATCCACTAGGCACATGCTAGGGGTCAGCAAACCACAGCCAATGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478766.1
CDS CCA 72 bp TGCAGGGTTTCAATCTCGTGGTCGATGTGCAGCTTGTaGTCTTTCCAGGCCTGCAGGGACTTGTACAGGTCC +
Preference number: 6 (lower is better)
Translates to: CRVSISWSMCSL*SFQACRDLYRS
Trigger: GGACCTGTACAAGTCCCTGCAGGCCTGGAAAGACCACAAGCTGCACATCGACCACGAGATTGAAACCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CAA 72 bp ATGACCATGAGGACTGGCCTGTGCGGGTACATCTTCTaGGACGTGCGGAAGAAGCTCACGCTGTCATTGGTG +
Preference number: 6 (lower is better)
Translates to: MTMRTGLCGYIF*DVRKKLTLSLV
Trigger: CACCAATGACAGCGTGAGCTTCTTCCGCACGTCCAAGAAGATGTACCCGCACAGGCCAGTCCTCATGGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359930.8
ENST00000463221.2
ENST00000467815.5
ENST00000484875.5
CDS CAA 72 bp GGCAGAAAGTTCTCCTCCTGGGCGTCCACCTTGTCATaGTCTCTCTTGTGTAGCAGCTTGCCTCTCTCCACC +
Preference number: 6 (lower is better)
Translates to: GRKFSSWASTLS*SLLCSSLPLST
Trigger: GGTGGAGAGAGGCAAGCTGCTACACAAGAGAGACAATGACAAGGTGGACGCCCAGGAGGAGAACTTTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CAA 72 bp TTCTCCTCCTGGGCGTCCACCTTGTCATTGTCTCTCTaGTGTAGCAGCTTGCTATGGGGCAGAGAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: FSSWASTLSLSL*CSSLLWGREQE
Trigger: CTCCTGCTCTCTGCCCCATAGCAAGCTGCTACACAAGAGAGACAATGACAAGGTGGACGCCCAGGAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465769.1
CDS CAA 90 bp GGTGCTTCTTTTGGGATGCGGGAGTCTCAAGTTGCGTCTGTGGCTTaGTTTCTTTTCCCTCGTCCCTCTTCACTCGCAGATCTCCGGCCT +
Preference number: 6 (lower is better)
Translates to: GASFGMRESQVASVA*FLFPRPSSLADLRP
Trigger: AGGCCGGAGATCTGCGAGTGAAGAGGGACGAGGGAAAAGAAACAAAGCCACAGACGCAACTTGAGACTCCCGCATCCCAAAAGAAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359930.8
ENST00000463221.2
CDS CAA 90 bp GGTGCTTCTTTTGGGATGCGGGAGTCTCAAGTTGCGTCTGTGGCTTaGTTTCTTTTCCCTCGTCCCTCTTCACTCGCAGATCAGCGCGCA +
Preference number: 6 (lower is better)
Translates to: GASFGMRESQVASVA*FLFPRPSSLADQRA
Trigger: TGCGCGCTGATCTGCGAGTGAAGAGGGACGAGGGAAAAGAAACAAAGCCACAGACGCAACTTGAGACTCCCGCATCCCAAAAGAAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437955.1
CDS CAA 90 bp TGGTACTTGGGCAGAAAGTTCTCCTCCTGGGCGTCCACCTTGTCATaGTCTCTCTTGTGTAGCAGCTTGCTATGGGGCAGAGAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: WYLGRKFSSWASTLS*SLLCSSLLWGREQE
Trigger: CTCCTGCTCTCTGCCCCATAGCAAGCTGCTACACAAGAGAGACAATGACAAGGTGGACGCCCAGGAGGAGAACTTTCTGCCCAAGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465769.1
CDS TCA 72 bp CTTCATGCTAAGCAGTGCCTCTGGCAGGCAGAGTGCTaGGGCTTACATGTGCTGAGATGCGTTTGGGAAGAG +
Preference number: 6 (lower is better)
Translates to: LHAKQCLWQAEC*GLHVLRCVWEE
Trigger: CTCTTCCCAAACGCATCTCAGCACATGTAAGCCTCAGCACTCTGCCTGCCAGAGGCACTGCTTAGCATGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463221.2
CDS GCA 72 bp TTTCTTTTATCTGCTTTCACAGGACTCGCCCCGGTCTaGAAACACTCGACTGCCTTTGCCGAAAGCCTCGCG +
Preference number: 6 (lower is better)
Translates to: FLLSAFTGLAPV*KHSTAFAESLA
Trigger: CGCGAGGCTTTCGGCAAAGGCAGTCGAGTGTTTGCAGACCGGGGCGAGTCCTGTGAAAGCAGATAAAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp CTCCTGCCTTGGTCTGTTGCCCAGGCTGTCTGGAGTTaGATCCCAGTTTCACCATGGACAAGCAGTATGTTC +
Preference number: 6 (lower is better)
Translates to: LLPWSVAQAVWS*IPVSPWTSSMF
Trigger: GAACATACTGCTTGTCCATGGTGAAACTGGGATGCAACTCCAGACAGCCTGGGCAACAGACCAAGGCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463221.2
CDS GCA 72 bp CATGTGCCTAGTGGATTTGAAGGGCCGAAGTGGGCATaGATAGCCCAATCCCTTCCCTTGCTTTTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: HVPSGFEGPKWA*IAQSLPLLFLW
Trigger: CCAGAGGAAAAGCAAGGGAAGGGATTGGGCTATGCATGCCCACTTCGGCCCTTCAAATCCACTAGGCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478766.1
CDS CCA 72 bp TACAAAGAAGGTCTCCTAGGTGACACCTATCTTTGGTaGGTGATCCTGGTCTCGGGCAGACCAGAGGGAAGG +
Preference number: 6 (lower is better)
Translates to: YKEGLLGDTYLW*VILVSGRPEGR
Trigger: CCTTCCCTCTGGTCTGCCCGAGACCAGGATCACCCACCAAAGATAGGTGTCACCTAGGAGACCTTCTTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479970.1
CDS CAA 72 bp TTCTCCTCCTGGGCGTCCACCTTGTCATTGTCTCTCTaGTGTAGCAGCTTGCCTCTCTCCACCAAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: FSSWASTLSLSL*CSSLPLSTKKE
Trigger: CTCCTTCTTGGTGGAGAGAGGCAAGCTGCTACACAAGAGAGACAATGACAAGGTGGACGCCCAGGAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CAA 72 bp GGAGGCCGTGTATCCCAAGTTAAAAATTCTCCTGCCTaGGTCTGTTGCCCAGGCTGTCTGGAGTTGCATCCC +
Preference number: 6 (lower is better)
Translates to: GGRVSQVKNSPA*VCCPGCLELHP
Trigger: GGGATGCAACTCCAGACAGCCTGGGCAACAGACCAAGGCAGGAGAATTTTTAACTTGGGATACACGGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463221.2
CDS CAA 72 bp GGCAGAAAGTTCTCCTCCTGGGCGTCCACCTTGTCATaGTCTCTCTTGTGTAGCAGCTTGCTATGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: GRKFSSWASTLS*SLLCSSLLWGR
Trigger: TCTGCCCCATAGCAAGCTGCTACACAAGAGAGACAATGACAAGGTGGACGCCCAGGAGGAGAACTTTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465769.1
CDS CAA 90 bp TGGTACTTGGGCAGAAAGTTCTCCTCCTGGGCGTCCACCTTGTCATaGTCTCTCTTGTGTAGCAGCTTGCCTCTCTCCACCAAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: WYLGRKFSSWASTLS*SLLCSSLPLSTKKE
Trigger: CTCCTTCTTGGTGGAGAGAGGCAAGCTGCTACACAAGAGAGACAATGACAAGGTGGACGCCCAGGAGGAGAACTTTCTGCCCAAGTACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CAA 90 bp CTCTTGGTGGGAGGCCGTGTATCCCAAGTTAAAAATTCTCCTGCCTaGGTCTGTTGCCCAGGCTGTCTGGAGTTGCATCCCAGTTTCACC +
Preference number: 6 (lower is better)
Translates to: LLVGGRVSQVKNSPA*VCCPGCLELHPSFT
Trigger: GGTGAAACTGGGATGCAACTCCAGACAGCCTGGGCAACAGACCAAGGCAGGAGAATTTTTAACTTGGGATACACGGCCTCCCACCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463221.2
CDS TCA 72 bp GGGCCATCGATCAGGTCCACTTGGCTGGAAACGACGTaGATCTGCCTCTTTTCCGCTTTCTTCTTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: GPSIRSTWLETT*ICLFSAFFFSS
Trigger: AGAGGAGAAGAAGAAAGCGGAAAAGAGGCAGATTCACGTCGTTTCCAGCCAAGTGGACCTGATCGATGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp TCTGTCACACTCTGGAGTTTAGTCAGGAAGCCCAAATaGTCTCAGAAGGAAGCCATGCCCTCAAACCCAGCC +
Preference number: 6 (lower is better)
Translates to: SVTLWSLVRKPK*SQKEAMPSNPA
Trigger: GGCTGGGTTTGAGGGCATGGCTTCCTTCTGAGAGCATTTGGGCTTCCTGACTAAACTCCAGAGTGTGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478766.1
CDS CAA 72 bp CGTGATAAATTCAGGAGGGCCATCGATCAGGTCCACTaGGCTGGAAACGACGTGAATCTGCCTCTTTTCCGC +
Preference number: 6 (lower is better)
Translates to: RDKFRRAIDQVH*AGNDVNLPLFR
Trigger: GCGGAAAAGAGGCAGATTCACGTCGTTTCCAGCCAAGTGGACCTGATCGATGGCCCTCCTGAATTTATCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CAA 90 bp GGTGCTTCTTTTGGGATGCGGGAGTCTCAAGTTGCGTCTGTGGCTTaGTTTCTTTTCCCTCGTCCCTCTTCACTCGCAGATTCGACACAC +
Preference number: 6 (lower is better)
Translates to: GASFGMRESQVASVA*FLFPRPSSLADSTH
Trigger: GTGTGTCGAATCTGCGAGTGAAGAGGGACGAGGGAAAAGAAACAAAGCCACAGACGCAACTTGAGACTCCCGCATCCCAAAAGAAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467815.5
ENST00000484875.5
CDS GCA 72 bp AGACCAGAGGGAAGGGCAGTTTCTCAAGATAACAGGTaGAGACTCACAGAGATGAGACTGAAGGATGGGCCA +
Preference number: 6 (lower is better)
Translates to: RPEGRAVSQDNR*RLTEMRLKDGP
Trigger: TGGCCCATCCTTCAGTCTCATCTCTGTGAGTCTGCACCTGTTATCTTGAGAAACTGCCCTTCCCTCTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479970.1
CDS CCA 72 bp GAAATGAGACGGAATTCCGTGTGTTTCCTGGGCAGTTaGTGCAGGTGTTCCTCTCTCAGGAATCACAGCTTG +
Preference number: 6 (lower is better)
Translates to: EMRRNSVCFLGS*CRCSSLRNHSL
Trigger: CAAGCTGTGATTCCTGAGAGAGGAACACCTGCACCAACTGCCCAGGAAACACACGGAATTCCGTCTCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433632.1
CDS CCA 72 bp GCCCAGGCTGTCTGGAGTTGCATCCCAGTTTCACCATaGACAAGCAGTATGTTCTTGGGGTCTTTAAACCAG +
Preference number: 6 (lower is better)
Translates to: AQAVWSCIPVSP*TSSMFLGSLNQ
Trigger: CTGGTTTAAAGACCCCAAGAACATACTGCTTGTCCATGGTGAAACTGGGATGCAACTCCAGACAGCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463221.2
CDS CCA 72 bp GTGTGGACCTGCATCAGTGGGAAGTCTGTCACACTCTaGAGTTTAGTCAGGAAGCCCAAATGCTCTCAGAAG +
Preference number: 6 (lower is better)
Translates to: VWTCISGKSVTL*SLVRKPKCSQK
Trigger: CTTCTGAGAGCATTTGGGCTTCCTGACTAAACTCCAGAGTGTGACAGACTTCCCACTGATGCAGGTCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478766.1
CDS CAA 72 bp TTTGGGATGCGGGAGTCTCAAGTTGCGTCTGTGGCTTaGTTTCTTTTCCCTCGTCCCTCTTCACTCGCAGAT +
Preference number: 6 (lower is better)
Translates to: FGMRESQVASVA*FLFPRPSSLAD
Trigger: ATCTGCGAGTGAAGAGGGACGAGGGAAAAGAAACAAAGCCACAGACGCAACTTGAGACTCCCGCATCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359930.8
ENST00000437955.1
ENST00000463221.2
ENST00000467815.5
ENST00000484875.5
CDS CAA 90 bp GTTAAAAATTCTCCTGCCTTGGTCTGTTGCCCAGGCTGTCTGGAGTaGCATCCCAGTTTCACCATGGACAAGCAGTATGTTCTTGGGGTC +
Preference number: 6 (lower is better)
Translates to: VKNSPALVCCPGCLE*HPSFTMDKQYVLGV
Trigger: GACCCCAAGAACATACTGCTTGTCCATGGTGAAACTGGGATGCAACTCCAGACAGCCTGGGCAACAGACCAAGGCAGGAGAATTTTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463221.2
CDS GCA 72 bp ATGAGACGGAATTCCGTGTGTTTCCTGGGCAGTTGGTaGAGGTGTTCCTCTCTCAGGAATCACAGCTTGTTA +
Preference number: 6 (lower is better)
Translates to: MRRNSVCFLGSW*RCSSLRNHSLL
Trigger: TAACAAGCTGTGATTCCTGAGAGAGGAACACCTGCACCAACTGCCCAGGAAACACACGGAATTCCGTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433632.1
CDS CCA 72 bp GTTTTTAAGGAGTCCGACCCACTCCTTCCAGCCGGGTaGCACGTAGGAGCCGTTGTATTCATTAAGATACTT +
Preference number: 6 (lower is better)
Translates to: VFKESDPLLPAG*HVGAVVFIKIL
Trigger: AAGTATCTTAATGAATACAACGGCTCCTACGTGCCACCCGGCTGGAAGGAGTGGGTCGGACTCCTTAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359930.8
ENST00000437955.1
ENST00000463221.2
ENST00000467815.5
ENST00000474450.5
ENST00000484875.5
CDS CCA 72 bp ACCTATTCTATGCAGTTCCATCCACACACCTCTTGGTaGGAGGCCGTGTATCCCAAGTTAAAAATTCTCCTG +
Preference number: 6 (lower is better)
Translates to: TYSMQFHPHTSW*EAVYPKLKILL
Trigger: CAGGAGAATTTTTAACTTGGGATACACGGCCTCCCACCAAGAGGTGTGTGGATGGAACTGCATAGAATAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463221.2
CDS CAA 72 bp TCATTGCCTGTGCAGTCAGGTGATGCCTCTATGTTTTaGGAGGTCCACCTCTGTTGTTTCTTAACCTTCCCA +
Preference number: 6 (lower is better)
Translates to: SLPVQSGDASMF*EVHLCCFLTFP
Trigger: TGGGAAGGTTAAGAAACAACAGAGGTGGACCTCCAAAAACATAGAGGCATCACCTGACTGCACAGGCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000479970.1
ENST00000484875.5
ENST00000495544.5
CDS CAA 90 bp ATCAAATATCGTGATAAATTCAGGAGGGCCATCGATCAGGTCCACTaGGCTGGAAACGACGTGAATCTGCCTCTTTTCCGCTTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: IKYRDKFRRAIDQVH*AGNDVNLPLFRFLL
Trigger: AAGAAGAAAGCGGAAAAGAGGCAGATTCACGTCGTTTCCAGCCAAGTGGACCTGATCGATGGCCCTCCTGAATTTATCACGATATTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359930.8
ENST00000467815.5
ENST00000484875.5
CDS CAA 90 bp GCATTAAAAGGAAACCTATTCTATGCAGTTCCATCCACACACCTCTaGGTGGGAGGCCGTGTATCCCAAGTTAAAAATTCTCCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: ALKGNLFYAVPSTHL*VGGRVSQVKNSPAL
Trigger: CAAGGCAGGAGAATTTTTAACTTGGGATACACGGCCTCCCACCAAGAGGTGTGTGGATGGAACTGCATAGAATAGGTTTCCTTTTAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463221.2
CDS CCA 72 bp GAAACCTATTCTATGCAGTTCCATCCACACACCTCTTaGTGGGAGGCCGTGTATCCCAAGTTAAAAATTCTC +
Preference number: 6 (lower is better)
Translates to: ETYSMQFHPHTS*WEAVYPKLKIL
Trigger: GAGAATTTTTAACTTGGGATACACGGCCTCCCACCAAGAGGTGTGTGGATGGAACTGCATAGAATAGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463221.2
CDS CAA 72 bp GGAAACCTATTCTATGCAGTTCCATCCACACACCTCTaGGTGGGAGGCCGTGTATCCCAAGTTAAAAATTCT +
Preference number: 6 (lower is better)
Translates to: GNLFYAVPSTHL*VGGRVSQVKNS
Trigger: AGAATTTTTAACTTGGGATACACGGCCTCCCACCAAGAGGTGTGTGGATGGAACTGCATAGAATAGGTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463221.2
CDS TCA 72 bp GAAGAAGGTCTCTTCATTTCTGGCCACTTTCGACGCTaGAACTGCCTAAGTTTTCAAGTGTCAAAGGAGAAT +
Preference number: 6 (lower is better)
Translates to: EEGLFISGHFRR*NCLSFQVSKEN
Trigger: ATTCTCCTTTGACACTTGAAAACTTAGGCAGTTTCAGCGTCGAAAGTGGCCAGAAATGAAGAGACCTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479970.1