RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SULF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000137573

Ensembl transcript IDs: ENST00000260128.8, ENST00000402687.9, ENST00000419716.7, ENST00000458141.6, ENST00000521946.5, ENST00000524731.1, ENST00000525061.5, ENST00000525112.1, ENST00000525999.5, ENST00000526654.1, ENST00000528146.1, ENST00000528286.1, ENST00000528783.5, ENST00000529041.5, ENST00000529134.5, ENST00000530674.1, ENST00000531064.5, ENST00000531512.5, ENST00000532015.1, ENST00000534088.1, ENST00000534179.5, ENST00000616868.1

Found 833 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTaGACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGAT +
Preference number: 1 (lower is better)
Translates to: VSVCTPLAHMLTSFY*TKVPRVAWNVGGCD
Trigger: ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR TCA 90 bp TCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTaGACATCTGATGAACTGAAATTCCATCGGAATGCACAGGAAGAT +
Preference number: 1 (lower is better)
Translates to: SPLCWNYFGVLRWPW*TSDELKFHRNAQED
Trigger: ATCTTCCTGTGCATTCCGATGGAATTTCAGTTCATCAGATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR GCA 90 bp AAGGTAACAGTTTCATCTAATCAGAGGAGAGTGAAGAGGAGGCGCTaGCTTCTAGGTGCTGTGACTTCTCCTTTTCGTGATTCTTCTCCA +
Preference number: 1 (lower is better)
Translates to: KVTVSSNQRRVKRRR*LLGAVTSPFRDSSP
Trigger: TGGAGAAGAATCACGAAAAGGAGAAGTCACAGCACCTAGAAGGCAGCGCCTCCTCTTCACTCTCCTCTGATTAGATGAAACTGTTACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGAGGCCATCTCCATTaGCACAGCGTGCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQRGHLH*HSVLSR
Trigger: TCTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCT...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTCTAATCAGAGGAGAGTaGAGAGGAGGCGCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVALIRGE*RGGAAF
Trigger: GAAGGCAGCGCCTCCTCTTCACTCTCCTCTGATTAG...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CCA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCGAATGGGCTGCAGCCTaGGGCTGGGCCCGAGCTCTA +
Preference number: 2 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCEWAAA*GWARAL
Trigger: TAGAGCTCGGGCCCAGCCCCAGGCTGCAGCCCATTC...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAGAGGCCATCTCCATTaGCACAGCGTGCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWRGHLH*HSVLSR
Trigger: TCTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCT...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAGCGCTGCCTTCTAGGTaGTGTGACTTCTCCTTTTCG +
Preference number: 2 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQALPSR*CDFSFS
Trigger: CGAAAAGGAGAAGTCACAGCACCTAGAAGGCAGCGC...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGGAATGGGCTGCAGCCTaGGGCTGGGCCCGAGCTCTA +
Preference number: 2 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLEWAAA*GWARAL
Trigger: TAGAGCTCGGGCCCAGCCCCAGGCTGCAGCCCATTC...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATTTCAAATGCAGGGTTTaGAGGTCAGCTGGCAAGGTC +
Preference number: 2 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHFKCRV*RSAGKV
Trigger: GACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAA...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATCTAATCAGAGGAGAGTaGAGAGGAGGCGCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDLIRGE*RGGAAF
Trigger: GAAGGCAGCGCCTCCTCTTCACTCTCCTCTGATTAG...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAGCTGGCAAGGTCAAATaGGGTGTTTTCCCAACCTTA +
Preference number: 2 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQAGKVK*GVFPTL
Trigger: TAAGGTTGGGAAAACACCTCATTTGACCTTGCCAGC...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATTCATGCCATCGCCACTaGAATCGGTTTCCAGATGAT +
Preference number: 2 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHSCHRH*NRFPDD
Trigger: ATCATCTGGAAACCGATTTCAGTGGCGATGGCATGA...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGGTTCTTTCGGGTGCCTaGGAATGGGCTGCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLVLSGA*EWAAAW
Trigger: CCAGGCTGCAGCCCATTCGCAGGCACCCGAAAGAAC...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGCGCTGCCTTCTAGGTaGTGTGACTTCTCCTTTTCG +
Preference number: 2 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCALPSR*CDFSFS
Trigger: CGAAAAGGAGAAGTCACAGCACCTAGAAGGCAGCGC...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGCACCGCTTGCTCACATaGTCACTAGCTTCTACTGCA +
Preference number: 2 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWHRLLT*SLASTA
Trigger: TGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTG...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTGAATGGGCTGCAGCCTaGGGCTGGGCCCGAGCTCTA +
Preference number: 2 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTEWAAA*GWARAL
Trigger: TAGAGCTCGGGCCCAGCCCCAGGCTGCAGCCCATTC...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAGAATGGGCTGCAGCCTaGGGCTGGGCCCGAGCTCTA +
Preference number: 2 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEEWAAA*GWARAL
Trigger: TAGAGCTCGGGCCCAGCCCCAGGCTGCAGCCCATTC...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCAGAGGCCATCTCCATTaGCACAGCGTGCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCRGHLH*HSVLSR
Trigger: TCTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCT...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGGCTGGCAAGGTCAAATaGGGTGTTTTCCCAACCTTA +
Preference number: 2 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWAGKVK*GVFPTL
Trigger: TAAGGTTGGGAAAACACCTCATTTGACCTTGCCAGC...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTTCAAATGCAGGGTTTaGAGGTCAGCTGGCAAGGTC +
Preference number: 2 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRFKCRV*RSAGKV
Trigger: GACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAA...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTAAATCGGTTTCCAGATaGTTAGTCTCTTCATGCCCC +
Preference number: 2 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAKSVSR*LVSSCP
Trigger: GGGGCATGAAGAGACTAATCATCTGGAAACCGATTT...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTGCAGTGAGACGGGGCTaGTTAACCTTCCCATCCATC +
Preference number: 2 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFAVRRG*LTFPSI
Trigger: GATGGATGGGAAGGTTAATCAGCCCCGTCTCACTGC...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531512.5
3UTR-3UTR GCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGGTTCTTTCGGGTGCCTaGGAATGGGCTGCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERVLSGA*EWAAAW
Trigger: CCAGGCTGCAGCCCATTCGCAGGCACCCGAAAGAAC...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR CAA 90 bp TGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTaGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGG +
Preference number: 2 (lower is better)
Translates to: WQIVNYNDESPCAHR*LTCSLASTAQRYPG
Trigger: CCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGAGGCCATCTCCATTaGCACAGCGTGCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFRGHLH*HSVLSR
Trigger: TCTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCT...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGGCTGGCAAGGTCAAATaGGGTGTTTTCCCAACCTTA +
Preference number: 2 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRAGKVK*GVFPTL
Trigger: TAAGGTTGGGAAAACACCTCATTTGACCTTGCCAGC...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCACTAATCAGAGGAGAGTaGAGAGGAGGCGCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSLIRGE*RGGAAF
Trigger: GAAGGCAGCGCCTCCTCTTCACTCTCCTCTGATTAG...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGACATCTTCCCCGCTATaGTGGAATTACTTCGGTGTT +
Preference number: 2 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWTSSPL*WNYFGV
Trigger: AACACCGAAGTAATTCCAGCATAGCGGGGAAGATGT...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTGCGCTGCCTTCTAGGTaGTGTGACTTCTCCTTTTCG +
Preference number: 2 (lower is better)
Translates to: FVILLHLGQHLPRYAGITALPSR*CDFSFS
Trigger: CGAAAAGGAGAAGTCACAGCACCTAGAAGGCAGCGC...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTGTGAAGAGGAGGCGCTaGCTTCTAGGTGCTGTGACT +
Preference number: 2 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFVKRRR*LLGAVT
Trigger: AGTCACAGCACCTAGAAGGCAGCGCCTCCTCTTCAC...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATCTCACTAGCTTCTACTaGACAAAGGTACCCAGGGTA +
Preference number: 2 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDLTSFY*TKVPRV
Trigger: TACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAG...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTTTGCCAGTTGATGTCTaGAGTGAGACGGGGCTGATT +
Preference number: 2 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCLPVDV*SETGLI
Trigger: AATCAGCCCCGTCTCACTGCAGACATCAACTGGCAA...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531512.5
3UTR-3UTR TCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTGCTGGCAAGGTCAAATaGGGTGTTTTCCCAACCTTA +
Preference number: 2 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPAGKVK*GVFPTL
Trigger: TAAGGTTGGGAAAACACCTCATTTGACCTTGCCAGC...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGGAACATCTGATGAACTaGAATTCCATCGGAATGCAC +
Preference number: 2 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWEHLMN*NSIGMH
Trigger: GTGCATTCCGATGGAATTTCAGTTCATCAGATGTTC...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGAGGCCATCTCCATTaGCACAGCGTGCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSERGHLH*HSVLSR
Trigger: TCTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCT...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTCTAATCAGAGGAGAGTaGAGAGGAGGCGCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTLIRGE*RGGAAF
Trigger: GAAGGCAGCGCCTCCTCTTCACTCTCCTCTGATTAG...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATCTAATCAGAGGAGAGTaGAGAGGAGGCGCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYLIRGE*RGGAAF
Trigger: GAAGGCAGCGCCTCCTCTTCACTCTCCTCTGATTAG...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTGTTTTCCCAACCTTATaGCTTGGGTCTTCATCTGAG +
Preference number: 2 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCVFPTL*LGSSSE
Trigger: CTCAGATGAAGACCCAAGGCATAAGGTTGGGAAAAC...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAGTTCTTTCGGGTGCCTaGGAATGGGCTGCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKVLSGA*EWAAAW
Trigger: CCAGGCTGCAGCCCATTCGCAGGCACCCGAAAGAAC...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCACCGCTTGCTCACATaGTCACTAGCTTCTACTGCA +
Preference number: 2 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLHRLLT*SLASTA
Trigger: TGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTG...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCATCATGCCATCGCCACTaGAATCGGTTTCCAGATGAT +
Preference number: 2 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSSCHRH*NRFPDD
Trigger: ATCATCTGGAAACCGATTTCAGTGGCGATGGCATGA...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGGAATGTTGGTGGCTGTaGTTACCTTTATTAGTTTAC +
Preference number: 2 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWECWWL*LPLLVY
Trigger: GTAAACTAATAAAGGTAATCACAGCCACCAACATTC...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTGTGAAGAGGAGGCGCTaGCTTCTAGGTGCTGTGACT +
Preference number: 2 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCVKRRR*LLGAVT
Trigger: AGTCACAGCACCTAGAAGGCAGCGCCTCCTCTTCAC...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTTCTTCCCCGCTATGCTaGAATTACTTCGGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFSSPLC*NYFGVL
Trigger: CAGAACACCGAAGTAATTCCAGCATAGCGGGGAAGA...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGATTCTTCTCCACCTTaGTCAACATCTTCCCCGCTA +
Preference number: 2 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSDSSPP*STSSPL
Trigger: TAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATC...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR CAA 90 bp CTGGAATGTCGTTATTCCATTCAAGTTTACTCTCTGGACTTAATGTaGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCA +
Preference number: 2 (lower is better)
Translates to: LECRYSIQVYSLDLM*VGSNAGFEGQLARS
Trigger: TGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAATAACGACATTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTTTCAAATGCAGGGTTTaGAGGTCAGCTGGCAAGGTC +
Preference number: 2 (lower is better)
Translates to: TDDTHIRQAANLNICTESFKCRV*RSAGKV
Trigger: GACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAA...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
3UTR-3UTR TCA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTGAACATCTGATGAACTaGAATTCCATCGGAATGCAC +
Preference number: 2 (lower is better)
Translates to: FVILLHLGQHLPRYAGITEHLMN*NSIGMH
Trigger: GTGCATTCCGATGGAATTTCAGTTCATCAGATGTTC...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGGTTTTCCCAACCTTATaGCTTGGGTCTTCATCTGAG +
Preference number: 2 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLVFPTL*LGSSSE
Trigger: CTCAGATGAAGACCCAAGGCATAAGGTTGGGAAAAC...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTGTTTTCCCAACCTTATaGCTTGGGTCTTCATCTGAG +
Preference number: 2 (lower is better)
Translates to: GGLFDFVTMTANSETDKPVFPTL*LGSSSE
Trigger: CTCAGATGAAGACCCAAGGCATAAGGTTGGGAAAAC...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGAAATCGGTTTCCAGATaGTTAGTCTCTTCATGCCCC +
Preference number: 2 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERKSVSR*LVSSCP
Trigger: GGGGCATGAAGAGACTAATCATCTGGAAACCGATTT...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTTCATGCCATCGCCACTaGAATCGGTTTCCAGATGAT +
Preference number: 2 (lower is better)
Translates to: TDDTHIRQAANLNICTESSCHRH*NRFPDD
Trigger: ATCATCTGGAAACCGATTTCAGTGGCGATGGCATGA...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
3UTR-3UTR TCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTGCAGTGGAAGTGTGTTaGAAGATTTACCAGGGGTGT +
Preference number: 2 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFAVEVC*KIYQGC
Trigger: ACACCCCTGGTAAATCTTTCAACACACTTCCACTGC...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATGATTCTTCTCCACCTTaGTCAACATCTTCCCCGCTA +
Preference number: 2 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYDSSPP*STSSPL
Trigger: TAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATC...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAAATCGGTTTCCAGATaGTTAGTCTCTTCATGCCCC +
Preference number: 2 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEKSVSR*LVSSCP
Trigger: GGGGCATGAAGAGACTAATCATCTGGAAACCGATTT...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAGTTTTCCCAACCTTATaGCTTGGGTCTTCATCTGAG +
Preference number: 2 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEVFPTL*LGSSSE
Trigger: CTCAGATGAAGACCCAAGGCATAAGGTTGGGAAAAC...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTCTCACTAGCTTCTACTaGACAAAGGTACCCAGGGTA +
Preference number: 2 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCLTSFY*TKVPRV
Trigger: TACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAG...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGGAATGTTGGTGGCTGTaGTTACCTTTATTAGTTTAC +
Preference number: 2 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLECWWL*LPLLVY
Trigger: GTAAACTAATAAAGGTAATCACAGCCACCAACATTC...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTACATCTTCCCCGCTATaGTGGAATTACTTCGGTGTT +
Preference number: 2 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCTSSPL*WNYFGV
Trigger: AACACCGAAGTAATTCCAGCATAGCGGGGAAGATGT...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAAAATCGGTTTCCAGATaGTTAGTCTCTTCATGCCCC +
Preference number: 2 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKKSVSR*LVSSCP
Trigger: GGGGCATGAAGAGACTAATCATCTGGAAACCGATTT...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR GCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAGTTTTCCCAACCTTATaGCTTGGGTCTTCATCTGAG +
Preference number: 2 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKVFPTL*LGSSSE
Trigger: CTCAGATGAAGACCCAAGGCATAAGGTTGGGAAAAC...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTTCATTACGCAGGCAGTaGAAGTGTGTTGAAAGATTT +
Preference number: 2 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFSLRRQ*KCVERF
Trigger: AAATCTTTCAACACACTTCCACTGCCTGCGTAATGA...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTTCATTACGCAGGCAGTaGAAGTGTGTTGAAAGATTT +
Preference number: 2 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTSLRRQ*KCVERF
Trigger: AAATCTTTCAACACACTTCCACTGCCTGCGTAATGA...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAGAACATCTGATGAACTaGAATTCCATCGGAATGCAC +
Preference number: 2 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKEHLMN*NSIGMH
Trigger: GTGCATTCCGATGGAATTTCAGTTCATCAGATGTTC...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTGAATGTTGGTGGCTGTaGTTACCTTTATTAGTTTAC +
Preference number: 2 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTECWWL*LPLLVY
Trigger: GTAAACTAATAAAGGTAATCACAGCCACCAACATTC...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR TCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAGAATGTTGGTGGCTGTaGTTACCTTTATTAGTTTAC +
Preference number: 2 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEECWWL*LPLLVY
Trigger: GTAAACTAATAAAGGTAATCACAGCCACCAACATTC...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTTCCCAACCTTATGCCTaGGGTCTTCATCTGAGTCAG +
Preference number: 3 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVSQPYA*GLHLSQ
Trigger: CTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGA...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTTCTCTGGACTTAATGTaGGTCGGTTCAAATGCAGGG +
Preference number: 3 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVSLDLM*VGSNAG
Trigger: CCCTGCATTTGAACCGACCAACATTAAGTCCAGAGA...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAACCGTGTGCACACCGCTaGCTCACATGCTCACTAGCT +
Preference number: 3 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQPCAHR*LTCSLA
Trigger: AGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGG...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR GCA 72 bp AACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATaGTCACTAGCTTCTACTGCACAAAGGTACCCAGGG +
Preference number: 3 (lower is better)
Translates to: NDESPCAHRLLT*SLASTAQRYPG
Trigger: CCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR GCA 72 bp GATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATaGTGGAATTACTTCGGTGTTCTGCGGTGGCCATGG +
Preference number: 3 (lower is better)
Translates to: DSSPPWSTSSPL*WNYFGVLRWPW
Trigger: CCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTTCTAGGCCTTGCCAGTaGATGTCTGCAGTGAGACGG +
Preference number: 3 (lower is better)
Translates to: FPTLCLGSSSESAEAISISRPCQ*MSAVRR
Trigger: CCGTCTCACTGCAGACATCAACTGGCAAGGCCTAGA...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTCAGAGGCCATCTCCATaGACACAGCGTGCTCAGCAG +
Preference number: 3 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPQRPSP*TQRAQQ
Trigger: CTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCTG...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTGTTCAAATGCAGGGTTaGAAGGTCAGCTGGCAAGGT +
Preference number: 3 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAVQMQG*KVSWQG
Trigger: ACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAAC...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCCAGAGGCCATCTCCATaGACACAGCGTGCTCAGCAG +
Preference number: 3 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCQRPSP*TQRAQQ
Trigger: CTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCTG...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGTCCCAACCTTATGCCTaGGGTCTTCATCTGAGTCAG +
Preference number: 3 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWSQPYA*GLHLSQ
Trigger: CTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGA...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR GCA 72 bp TGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTaGACAAAGGTACCCAGGGTAGCTTGGAATGTTGGT +
Preference number: 3 (lower is better)
Translates to: CTPLAHMLTSFY*TKVPRVAWNVG
Trigger: ACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCTAGGCCTTGCCAGTaGATGTCTGCAGTGAGACGG +
Preference number: 3 (lower is better)
Translates to: FVILLHLGQHLPRYAGITSRPCQ*MSAVRR
Trigger: CCGTCTCACTGCAGACATCAACTGGCAAGGCCTAGA...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTCAGAGGCCATCTCCATaGACACAGCGTGCTCAGCAG +
Preference number: 3 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFQRPSP*TQRAQQ
Trigger: CTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCTG...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTTCCCAACCTTATGCCTaGGGTCTTCATCTGAGTCAG +
Preference number: 3 (lower is better)
Translates to: FPTLCLGSSSESAEAISISQPYA*GLHLSQ
Trigger: CTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGA...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATGTTCAAATGCAGGGTTaGAAGGTCAGCTGGCAAGGT +
Preference number: 3 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDVQMQG*KVSWQG
Trigger: ACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAAC...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTTCTAGGCCTTGCCAGTaGATGTCTGCAGTGAGACGG +
Preference number: 3 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFSRPCQ*MSAVRR
Trigger: CCGTCTCACTGCAGACATCAACTGGCAAGGCCTAGA...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTCCGTGTGCACACCGCTaGCTCACATGCTCACTAGCT +
Preference number: 3 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTPCAHR*LTCSLA
Trigger: AGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGG...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATCCGTGTGCACACCGCTaGCTCACATGCTCACTAGCT +
Preference number: 3 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYPCAHR*LTCSLA
Trigger: AGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGG...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTTCTAGGCCTTGCCAGTaGATGTCTGCAGTGAGACGG +
Preference number: 3 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFSRPCQ*MSAVRR
Trigger: CCGTCTCACTGCAGACATCAACTGGCAAGGCCTAGA...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTTCTAGGCCTTGCCAGTaGATGTCTGCAGTGAGACGG +
Preference number: 3 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTSRPCQ*MSAVRR
Trigger: CCGTCTCACTGCAGACATCAACTGGCAAGGCCTAGA...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR TCA 72 bp TCTGTCATGCCATCGCCACTGAAATCGGTTTCCAGATaGTTAGTCTCTTCATGCCCCGTCCATTTTTCGGTT +
Preference number: 3 (lower is better)
Translates to: SVMPSPLKSVSR*LVSSCPVHFSV
Trigger: AACCGAAAAATGGACGGGGCATGAAGAGACTAATCATCTGGAAACCGATTTCAGTGGCGATGGCATGACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTCAAGAACCCGTCACTTaGAGCAGTTTGAGTCTTATT +
Preference number: 3 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPQEPVT*SSLSLI
Trigger: AATAAGACTCAAACTGCTCAAAGTGACGGGTTCTTG...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGTCCCAACCTTATGCCTaGGGTCTTCATCTGAGTCAG +
Preference number: 3 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERSQPYA*GLHLSQ
Trigger: CTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGA...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTTCTCTGGACTTAATGTaGGTCGGTTCAAATGCAGGG +
Preference number: 3 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFSLDLM*VGSNAG
Trigger: CCCTGCATTTGAACCGACCAACATTAAGTCCAGAGA...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTCAAGAACCCGTCACTTaGAGCAGTTTGAGTCTTATT +
Preference number: 3 (lower is better)
Translates to: FVILLHLGQHLPRYAGITQEPVT*SSLSLI
Trigger: AATAAGACTCAAACTGCTCAAAGTGACGGGTTCTTG...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTTCCCAACCTTATGCCTaGGGTCTTCATCTGAGTCAG +
Preference number: 3 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVSQPYA*GLHLSQ
Trigger: CTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGA...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTTACTGTGTGTCGTCCTaGGGGGTTTATTTGACTTTG +
Preference number: 3 (lower is better)
Translates to: GGLFDFVTMTANSETDKPYCVSS*GVYLTL
Trigger: CAAAGTCAAATAAACCCCCAAGGACGACACACAGTA...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTTACTGTGTGTCGTCCTaGGGGGTTTATTTGACTTTG +
Preference number: 3 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTYCVSS*GVYLTL
Trigger: CAAAGTCAAATAAACCCCCAAGGACGACACACAGTA...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTCAAGAACCCGTCACTTaGAGCAGTTTGAGTCTTATT +
Preference number: 3 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVQEPVT*SSLSLI
Trigger: AATAAGACTCAAACTGCTCAAAGTGACGGGTTCTTG...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTCAAGAACCCGTCACTTaGAGCAGTTTGAGTCTTATT +
Preference number: 3 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTQEPVT*SSLSLI
Trigger: AATAAGACTCAAACTGCTCAAAGTGACGGGTTCTTG...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAACAAGAACCCGTCACTTaGAGCAGTTTGAGTCTTATT +
Preference number: 3 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEQEPVT*SSLSLI
Trigger: AATAAGACTCAAACTGCTCAAAGTGACGGGTTCTTG...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
3UTR-3UTR CAA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAATCTCTGGACTTAATGTaGGTCGGTTCAAATGCAGGG +
Preference number: 3 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKSLDLM*VGSNAG
Trigger: CCCTGCATTTGAACCGACCAACATTAAGTCCAGAGA...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTGCAGCCGGGAAGGCCTaGCCTCTGATCCTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVAAGKA*PLILAA
Trigger: GGCAGCGAGGATCAGAGGCCAGGCCTTCCCGGCTGC...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR TCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAGGAAGGCCTGGCCTCTaGTCCTCGCTGCCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQGRPGL*SSLPSL
Trigger: GAGCGAGGGCAGCGAGGATCAGAGGCCAGGCCTTCC...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR GCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTGGCGTTGCTGCTATCTaGCAGCATCCTGCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVGVAAI*QHPAPV
Trigger: AACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCC...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTAGAGGCCATCTCCATTaGCACAGCGTGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVRGHLH*HSVLSR
Trigger: TCTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCT...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTGGGGCTGTCTGCCAGTaGTTGTTGTCATGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVGAVCQ*LLSCVK
Trigger: CTTCACGCATGACAACAACCACTGGCAGACAGCCCC...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTCTGGGGTTTCCTAGTTaGCGATCAAGCCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: AISIDTACSAETTKNPSLLGFPS*RSSRPG
Trigger: GCCGGGGCGGCTTGATCGGCAACTAGGAAACCCCAG...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR CCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTTTAGATGATGGTGGGTaGCCGTCAGCACCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVLDDGG*PSAPLH
Trigger: ATGGAGAGGTGCTGACGGCCACCCACCATCATCTAA...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260128.8
ENST00000402687.9
CDS-3UTR CCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTGAGTCCTCGGGGCCGTaGGGCGCAGCGTGGCTGATC +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCESSGP*GAAWLI
Trigger: GATCAGCCACGCTGCGCCCCACGGCCCCGAGGACTC...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTTTCTTTGGCTTCTGCTaGCACGGTAACCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVFFGFC*HGNQTP
Trigger: GGGAGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAA...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATCGCTGCCCTCGCTCCTaGCCTCTGCGCCTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDRCPRS*PLRLGF
Trigger: AAACCCCAGGCGCAGAGGCCAGGAGCGAGGGCAGCG...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR CCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATGCAGCCGGGAAGGCCTaGCCTCTGATCCTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDAAGKA*PLILAA
Trigger: GGCAGCGAGGATCAGAGGCCAGGCCTTCCCGGCTGC...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR TCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATGCACATACTTCCCGGTaGGCATGGAGGACCGTGACG +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHAHTSR*AWRTVT
Trigger: CGTCACGGTCCTCCATGCTCACCGGGAAGTATGTGC...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTGGGCCAAGTCAATGTTaGGAACGATCTGTGGGACTA +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVGPSQC*ERSVGL
Trigger: TAGTCCCACAGATCGTTCTCAACATTGACTTGGCCC...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTGTTTTGTTCATGACTTaGAGGGACCCCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVVLFMT*RDPSST
Trigger: TGTGGAGCTGGGGTCCCTGCAAGTCATGAACAAAAC...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTAGGTTCCGCGTGCTCTaGCGGACTGTGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: AISIDTACSAETTKNPSLRFRVL*RTVSRS
Trigger: TGACCTGCTCACAGTCCGGCAGAGCACGCGGAACCT...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGGTGGGCCCACGGCGTTaGTGCTATCTGCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWVGPRR*CYLPAS
Trigger: GGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCAC...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTGTTCTTTCGGGTGCCTaGGAATGGGCTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AISIDTACSAETTKNPSLVLSGA*EWAAAW
Trigger: CCAGGCTGCAGCCCATTCGCAGGCACCCGAAAGAAC...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGTCCGAGGCTCATGCATaGCCTGCCACGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWSEAHA*PATRGK
Trigger: CTTCCCCCTCGTGGCAGGCCATGCATGAGCCTCGGA...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTCGTGTCTGCCGAGTATaGACAAATCTGGGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVRVCRV*TNLGLY
Trigger: GTACAAGCCCAGATTTGTCCATACTCGGCAGACACG...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGTCGGACAGTGGTAGGTaGGCCCACGGCGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWSDSGR*AHGVAA
Trigger: AGCAGCAACGCCGTGGGCCCACCTACCACTGTCCGA...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTTCGGACAGTGGTAGGTaGGCCCACGGCGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFSDSGR*AHGVAA
Trigger: AGCAGCAACGCCGTGGGCCCACCTACCACTGTCCGA...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATGAATGGGCTGCAGCCTaGGGCTGGGCCCGAGCTCTA +
Preference number: 4 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDEWAAA*GWARAL
Trigger: TAGAGCTCGGGCCCAGCCCCAGGCTGCAGCCCATTC...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTGCTGGCATAGTTCTTTaGCCCGTTCATATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVAGIVL*PVHIWA
Trigger: TGCCCAAATATGAACGGGTCAAAGAACTATGCCAGC...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTTGCTCTGCCGGACTGTaGGCAGGTCACTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFCSAGL*AGHWVL
Trigger: AAGGACCCAGTGACCTGCTCACAGTCCGGCAGAGCA...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTGCTGGCAAGGTCAAATaGGGTGTTTTCCCAACCTTA +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVAGKVK*GVFPTL
Trigger: TAAGGTTGGGAAAACACCTCATTTGACCTTGCCAGC...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTTCATGCCATCGCCACTaGAATCGGTTTCCAGATGAT +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVSCHRH*NRFPDD
Trigger: ATCATCTGGAAACCGATTTCAGTGGCGATGGCATGA...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTATCTGCCAGCATCCTaGCCCTGTTGCCACCACTGG +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAYLPAS*PCCHHW
Trigger: CCAGTGGTGGCAACAGGGGCAGGATGCTGGCAGATA...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATTATCTGCCAGCATCCTaGCCCTGTTGCCACCACTGG +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHYLPAS*PCCHHW
Trigger: CCAGTGGTGGCAACAGGGGCAGGATGCTGGCAGATA...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAGTCATGTTCCTCATCTaGCCTGACCTCCGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQVMFLI*PDLRGA
Trigger: CGCTCCTCGGAGGTCAGGGCAGATGAGGAACATGAC...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR GCA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTGTCATGTTCCTCATCTaGCCTGACCTCCGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: AISIDTACSAETTKNPSLVMFLI*PDLRGA
Trigger: CGCTCCTCGGAGGTCAGGGCAGATGAGGAACATGAC...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR CCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTGTGTCTCTTACGGATTaGAGGCTGAGGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAVSLTD*RLRAGL
Trigger: CAGCCCTGCCCTCAGCCTCCAATCCGTAAGAGACAC...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260128.8
ENST00000458141.6
CDS-3UTR CCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATTCCGAGGCTCATGCATaGCCTGCCACGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDSEAHA*PATRGK
Trigger: CTTCCCCCTCGTGGCAGGCCATGCATGAGCCTCGGA...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTCCGTGGGGCGCAGCGTaGCTGATCACCATCATAACG +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFPWGAA*LITIIT
Trigger: CGTTATGATGGTGATCAGCCACGCTGCGCCCCACGG...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTCGGACAGTGGTAGGTaGGCCCACGGCGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRSDSGR*AHGVAA
Trigger: AGCAGCAACGCCGTGGGCCCACCTACCACTGTCCGA...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTGAATGGGCTGCAGCCTaGGGCTGGGCCCGAGCTCTA +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPEWAAA*GWARAL
Trigger: TAGAGCTCGGGCCCAGCCCCAGGCTGCAGCCCATTC...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAACTGGGTCCAGAAGTTTaGGGACAGACTTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQLGPEV*GQTCRP
Trigger: TGGACGGCAAGTCTGTCCTCAAACTTCTGGACCCAG...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTCTGGGTCCAGAAGTTTaGGGACAGACTTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: AISIDTACSAETTKNPSLLGPEV*GQTCRP
Trigger: TGGACGGCAAGTCTGTCCTCAAACTTCTGGACCCAG...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTGGTCCTTTACACTTGTaGATTCGAAGCTTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVGPLHL*IRSLPD
Trigger: ATCTGGCAAGCTTCGAATTCACAAGTGTAAAGGACC...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGCTCTGCCGGACTGTaGGCAGGTCACTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRCSAGL*AGHWVL
Trigger: AAGGACCCAGTGACCTGCTCACAGTCCGGCAGAGCA...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTTGCTCTGCCGGACTGTaGGCAGGTCACTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCCSAGL*AGHWVL
Trigger: AAGGACCCAGTGACCTGCTCACAGTCCGGCAGAGCA...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTGCCTCCTTGAATGGGTaGAGATGGCTCTTTAATTTC +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVASLNG*RWLFNF
Trigger: GAAATTAAAGAGCCATCTTCACCCATTCAAGGAGGC...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATCCTGAGCAGCCTCCTTaGATGGGTGAAGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHPEQPP*MGEDGS
Trigger: AGAGCCATCTTCACCCATTCAAGGAGGCTGCTCAGG...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTCCTGAGCAGCCTCCTTaGATGGGTGAAGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAPEQPP*MGEDGS
Trigger: AGAGCCATCTTCACCCATTCAAGGAGGCTGCTCAGG...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATGCAGTGAGACGGGGCTaGTTAACCTTCCCATCCATC +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHAVRRG*LTFPSI
Trigger: GATGGATGGGAAGGTTAATCAGCCCCGTCTCACTGC...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATAGAGGCCATCTCCATTaGCACAGCGTGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHRGHLH*HSVLSR
Trigger: TCTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCT...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATCTAATCAGAGGAGAGTaGAGAGGAGGCGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHLIRGE*RGGAAF
Trigger: GAAGGCAGCGCCTCCTCTTCACTCTCCTCTGATTAG...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAACTAATCAGAGGAGAGTaGAGAGGAGGCGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQLIRGE*RGGAAF
Trigger: GAAGGCAGCGCCTCCTCTTCACTCTCCTCTGATTAG...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTGGAAGGCCTGGCCTCTaGTCCTCGCTGCCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPGRPGL*SSLPSL
Trigger: GAGCGAGGGCAGCGAGGATCAGAGGCCAGGCCTTCC...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR GCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTGTGGGCCCACGGCGTTaGTGCTATCTGCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCVGPRR*CYLPAS
Trigger: GGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCAC...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTGTTCTTTCGGGTGCCTaGGAATGGGCTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FPTLCLGSSSESAEAISIVLSGA*EWAAAW
Trigger: CCAGGCTGCAGCCCATTCGCAGGCACCCGAAAGAAC...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTCTGGGGTTTCCTAGTTaGCGATCAAGCCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCLGFPS*RSSRPG
Trigger: GCCGGGGCGGCTTGATCGGCAACTAGGAAACCCCAG...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR CCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAATGTTCACAGGCTGTCTaGTACCTGGCCTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQCSQAV*YLACWH
Trigger: ATGCCAGCAGGCCAGGTACCAGACAGCCTGTGAACA...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGCCACCACTGGAAGCCTaGAGATCTCTTGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWPPLEA*RSLGPL
Trigger: CAAGGGGCCAAGAGATCTCCAGGCTTCCAGTGGTGG...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAACCCTGTTGCCACCACTaGAAGCCTGGAGATCTCTTG +
Preference number: 4 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQPCCHH*KPGDLL
Trigger: CAAGAGATCTCCAGGCTTCCAGTGGTGGCAACAGGG...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTGAATGGGCTGCAGCCTaGGGCTGGGCCCGAGCTCTA +
Preference number: 4 (lower is better)
Translates to: FVILLHLGQHLPRYAGITEWAAA*GWARAL
Trigger: TAGAGCTCGGGCCCAGCCCCAGGCTGCAGCCCATTC...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCGCTGCCCTCGCTCCTaGCCTCTGCGCCTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLRCPRS*PLRLGF
Trigger: AAACCCCAGGCGCAGAGGCCAGGAGCGAGGGCAGCG...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR CCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATGGAGCAGAGATAAGGTaGCAGCGGGACTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHGAEIR*QRDFLP
Trigger: AGGAAGGAAGTCCCGCTGCCACCTTATCTCTGCTCC...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR TCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTCTGGGTCCAGAAGTTTaGGGACAGACTTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFLGPEV*GQTCRP
Trigger: TGGACGGCAAGTCTGTCCTCAAACTTCTGGACCCAG...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTAGAGGCCATCTCCATTaGCACAGCGTGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFRGHLH*HSVLSR
Trigger: TCTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCT...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGCTAATCAGAGGAGAGTaGAGAGGAGGCGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWLIRGE*RGGAAF
Trigger: GAAGGCAGCGCCTCCTCTTCACTCTCCTCTGATTAG...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCGGCTCATGCATGGCCTaGCACGAGGGGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCGSCMA*HEGEEQ
Trigger: CTGCTCTTCCCCCTCGTGGCAGGCCATGCATGAGCC...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTGTCTGGTACCTGGCCTaGTGGCATAGTTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAVWYLA*WHSSLT
Trigger: GGTCAAAGAACTATGCCAGCAGGCCAGGTACCAGAC...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTTGTGAATTCGAAGCTTaGCAGATGTATCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVCEFEA*QMYPQC
Trigger: GCATTGAGGATACATCTGGCAAGCTTCGAATTCACA...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTAGGTTCCGCGTGCTCTaGCGGACTGTGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPRFRVL*RTVSRS
Trigger: TGACCTGCTCACAGTCCGGCAGAGCACGCGGAACCT...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGGGCGTTGCTGCTATCTaGCAGCATCCTGCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRGVAAI*QHPAPV
Trigger: AACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCC...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTGGCCCACGGCGTTGCTaGTATCTGCCAGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFGPRRC*YLPASC
Trigger: GCAGGATGCTGGCAGATAGCAGCAACGCCGTGGGCC...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTGCGCTGCCTTCTAGGTaGTGTGACTTCTCCTTTTCG +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAALPSR*CDFSFS
Trigger: CGAAAAGGAGAAGTCACAGCACCTAGAAGGCAGCGC...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGGTGAAGAGGAGGCGCTaGCTTCTAGGTGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWVKRRR*LLGAVT
Trigger: AGTCACAGCACCTAGAAGGCAGCGCCTCCTCTTCAC...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTGAGTCCTCGGGGCCGTaGGGCGCAGCGTGGCTGATC +
Preference number: 4 (lower is better)
Translates to: TDDTHIRQAANLNICTESESSGP*GAAWLI
Trigger: GATCAGCCACGCTGCGCCCCACGGCCCCGAGGACTC...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTGAGTCCTCGGGGCCGTaGGGCGCAGCGTGGCTGATC +
Preference number: 4 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVESSGP*GAAWLI
Trigger: GATCAGCCACGCTGCGCCCCACGGCCCCGAGGACTC...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGTACCTGGCCTGCTaGCATAGTTCTTTGACCCGT +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAWYLAC*HSSLTR
Trigger: ACGGGTCAAAGAACTATGCCAGCAGGCCAGGTACCA...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTTCTTTGGCTTCTGCTaGCACGGTAACCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: AISIDTACSAETTKNPSLFFGFC*HGNQTP
Trigger: GGGAGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAA...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGCCACCACTGGAAGCCTaGAGATCTCTTGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRPPLEA*RSLGPL
Trigger: CAAGGGGCCAAGAGATCTCCAGGCTTCCAGTGGTGG...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTTCTCGTTTTGTTCATaGCTTGCAGGGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AISIDTACSAETTKNPSLFSFCS*LAGTPA
Trigger: AGCTGGGGTCCCTGCAAGTCATGAACAAAACGAGAA...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATTTGCTATCTACTTCCTaGGCAGCCTCCTTGAATGGG +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHLLSTS*AASLNG
Trigger: CCCATTCAAGGAGGCTGCTCAGGAAGTAGATAGCAA...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTTACGGTTGTTCTCCTTaGAAAGTTGCAGTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVYGCSP*KVAVCY
Trigger: ATAGCAAACTGCAACTTTTCAAGGAGAACAACCGTA...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGAGAGGCCATCTCCATTaGCACAGCGTGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRRGHLH*HSVLSR
Trigger: TCTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCT...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTAGAGGCCATCTCCATTaGCACAGCGTGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCRGHLH*HSVLSR
Trigger: TCTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCT...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTGTATCCTCAATGCATTaGCACTTCTGCCCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAVSSMH*HFCPGC
Trigger: ACAACCGGGGCAGAAGTGGCAATGCATTGAGGATAC...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGGTGGGCCCACGGCGTTaGTGCTATCTGCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLVGPRR*CYLPAS
Trigger: GGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCAC...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGCAGAACGGGGCTGTCTaGCAGTGGTTGTTGTCATGC +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRQNGAV*QWLLSC
Trigger: GCATGACAACAACCACTGGCAGACAGCCCCGTTCTG...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTCAGAACGGGGCTGTCTaGCAGTGGTTGTTGTCATGC +
Preference number: 4 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCQNGAV*QWLLSC
Trigger: GCATGACAACAACCACTGGCAGACAGCCCCGTTCTG...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTTGCCAGTTGATGTCTaGAGTGAGACGGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVALPVDV*SETGLI
Trigger: AATCAGCCCCGTCTCACTGCAGACATCAACTGGCAA...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTGCGCTGCCTTCTAGGTaGTGTGACTTCTCCTTTTCG +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFALPSR*CDFSFS
Trigger: CGAAAAGGAGAAGTCACAGCACCTAGAAGGCAGCGC...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTGTGTCTCTTACGGATTaGAGGCTGAGGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPVSLTD*RLRAGL
Trigger: CAGCCCTGCCCTCAGCCTCCAATCCGTAAGAGACAC...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260128.8
ENST00000458141.6
CDS-3UTR CCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGTCCGAGGCTCATGCATaGCCTGCCACGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLSEAHA*PATRGK
Trigger: CTTCCCCCTCGTGGCAGGCCATGCATGAGCCTCGGA...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTTGGTACCTGGCCTGCTaGCATAGTTCTTTGACCCGT +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFWYLAC*HSSLTR
Trigger: ACGGGTCAAAGAACTATGCCAGCAGGCCAGGTACCA...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAACGTGTCTGCCGAGTATaGACAAATCTGGGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQRVCRV*TNLGLY
Trigger: GTACAAGCCCAGATTTGTCCATACTCGGCAGACACG...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGAGCCTGGAGATCTCTTaGCCCCTTGTGGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRSLEIS*PLVAFI
Trigger: GATGAAGGCCACAAGGGGCCAAGAGATCTCCAGGCT...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTCCACCACTGGAAGCCTaGAGATCTCTTGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCPPLEA*RSLGPL
Trigger: CAAGGGGCCAAGAGATCTCCAGGCTTCCAGTGGTGG...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATTCAATGTATGCCTTATaGTCCTTCCACGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHSMYAL*SFHALA
Trigger: GGCCAGAGCGTGGAAGGACCATAAGGCATACATTGA...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTCAATGTATGCCTTATaGTCCTTCCACGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: AISIDTACSAETTKNPSLSMYAL*SFHALA
Trigger: GGCCAGAGCGTGGAAGGACCATAAGGCATACATTGA...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTTCATTACGCAGGCAGTaGAAGTGTGTTGAAAGATTT +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVSLRRQ*KCVERF
Trigger: AAATCTTTCAACACACTTCCACTGCCTGCGTAATGA...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTCCTGGCCTCTGCGCCTaGGGTTTCCTAGTTGCCGAT +
Preference number: 4 (lower is better)
Translates to: FVILLHLGQHLPRYAGITPGLCA*GFLVAD
Trigger: ATCGGCAACTAGGAAACCCCAGGCGCAGAGGCCAGG...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR TCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATGCTGGCATAGTTCTTTaGCCCGTTCATATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHAGIVL*PVHIWA
Trigger: TGCCCAAATATGAACGGGTCAAAGAACTATGCCAGC...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAGCTGGCATAGTTCTTTaGCCCGTTCATATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQAGIVL*PVHIWA
Trigger: TGCCCAAATATGAACGGGTCAAAGAACTATGCCAGC...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGTTGCTATCTACTTCCTaGGCAGCCTCCTTGAATGGG +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWLLSTS*AASLNG
Trigger: CCCATTCAAGGAGGCTGCTCAGGAAGTAGATAGCAA...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTGAATGTTGGTGGCTGTaGTTACCTTTATTAGTTTAC +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVECWWL*LPLLVY
Trigger: GTAAACTAATAAAGGTAATCACAGCCACCAACATTC...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTGCAATCTTAAAGGTATaGTGTATGATGAACGCTTTG +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVAILKV*CMMNAL
Trigger: CAAAGCGTTCATCATACATCATACCTTTAAGATTGC...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR GCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTAAAGTCCGAGGCTCATaGATGGCCTGCCACGAGGGG +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPKVRGS*MACHEG
Trigger: CCCCTCGTGGCAGGCCATGCATGAGCCTCGGACTTT...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTGTCTGGTACCTGGCCTaGTGGCATAGTTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: FPTLCLGSSSESAEAISIVWYLA*WHSSLT
Trigger: GGTCAAAGAACTATGCCAGCAGGCCAGGTACCAGAC...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTAGGTTCCGCGTGCTCTaGCGGACTGTGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPRFRVL*RTVSRS
Trigger: TGACCTGCTCACAGTCCGGCAGAGCACGCGGAACCT...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGGGCCCACGGCGTTGCTaGTATCTGCCAGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERGPRRC*YLPASC
Trigger: GCAGGATGCTGGCAGATAGCAGCAACGCCGTGGGCC...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGTTCTTTCGGGTGCCTaGGAATGGGCTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSVLSGA*EWAAAW
Trigger: CCAGGCTGCAGCCCATTCGCAGGCACCCGAAAGAAC...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATGCGCTGCCTTCTAGGTaGTGTGACTTCTCCTTTTCG +
Preference number: 4 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDALPSR*CDFSFS
Trigger: CGAAAAGGAGAAGTCACAGCACCTAGAAGGCAGCGC...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTCTCGCTCCTGGCCTCTaGGCCTGGGGTTTCCTAGTT +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPLAPGL*AWGFLV
Trigger: AACTAGGAAACCCCAGGCGCAGAGGCCAGGAGCGAG...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR CCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCACCGTGGGGCGCAGCGTaGCTGATCACCATCATAACG +
Preference number: 4 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSPWGAA*LITIIT
Trigger: CGTTATGATGGTGATCAGCCACGCTGCGCCCCACGG...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAGAGTCCTCGGGGCCGTaGGGCGCAGCGTGGCTGATC +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKESSGP*GAAWLI
Trigger: GATCAGCCACGCTGCGCCCCACGGCCCCGAGGACTC...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTGTGGATGGGCAGCATTaGTCCTGTGTACTGCATAAT +
Preference number: 4 (lower is better)
Translates to: AISIDTACSAETTKNPSLVDGQH*SCVLHN
Trigger: ATTATGCAGTACACAGGACCAATGCTGCCCATCCAC...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTTATCACGCCAAATTTTaGCCTTCTTGTTTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVYHAKF*PSCLFE
Trigger: TTCGAACAAACAAGAAGGCCAAAATTTGGCGTGATA...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTCACGCTCTGGCCGATTaGTACAGTTCTCTCTCACAA +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFHALAD*YSSLSQ
Trigger: TTGTGAGAGAGAACTGTACCAATCGGCCAGAGCGTG...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTGGGGCTGTCTGCCAGTaGTTGTTGTCATGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPGAVCQ*LLSCVK
Trigger: CTTCACGCATGACAACAACCACTGGCAGACAGCCCC...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTGAATGGGCTGCAGCCTaGGGCTGGGCCCGAGCTCTA +
Preference number: 4 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFEWAAA*GWARAL
Trigger: TAGAGCTCGGGCCCAGCCCCAGGCTGCAGCCCATTC...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAATCTTCCCCGCTATGCTaGAATTACTTCGGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQSSPLC*NYFGVL
Trigger: CAGAACACCGAAGTAATTCCAGCATAGCGGGGAAGA...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGGGCCAAGTCAATGTTaGGAACGATCTGTGGGACTA +
Preference number: 4 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCGPSQC*ERSVGL
Trigger: TAGTCCCACAGATCGTTCTCAACATTGACTTGGCCC...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTGGGCCAAGTCAATGTTaGGAACGATCTGTGGGACTA +
Preference number: 4 (lower is better)
Translates to: FPTLCLGSSSESAEAISIGPSQC*ERSVGL
Trigger: TAGTCCCACAGATCGTTCTCAACATTGACTTGGCCC...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTGCCTCCTTGAATGGGTaGAGATGGCTCTTTAATTTC +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAASLNG*RWLFNF
Trigger: GAAATTAAAGAGCCATCTTCACCCATTCAAGGAGGC...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATGCCTCCTTGAATGGGTaGAGATGGCTCTTTAATTTC +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHASLNG*RWLFNF
Trigger: GAAATTAAAGAGCCATCTTCACCCATTCAAGGAGGC...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTTTGCTATCTACTTCCTaGGCAGCCTCCTTGAATGGG +
Preference number: 4 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCLLSTS*AASLNG
Trigger: CCCATTCAAGGAGGCTGCTCAGGAAGTAGATAGCAA...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTTGCTATCTACTTCCTaGGCAGCCTCCTTGAATGGG +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRLLSTS*AASLNG
Trigger: CCCATTCAAGGAGGCTGCTCAGGAAGTAGATAGCAA...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTATCCTTGACAGCTTCTaGGCTCCATTAGTTGTACGT +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAILDSF*APLVVR
Trigger: ACGTACAACTAATGGAGCTCAGAAGCTGTCAAGGAT...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATATCCTTGACAGCTTCTaGGCTCCATTAGTTGTACGT +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHILDSF*APLVVR
Trigger: ACGTACAACTAATGGAGCTCAGAAGCTGTCAAGGAT...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTCACTGCTTATATCCTTaGCAGCTTCTGAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAHCLYP*QLLSSI
Trigger: AATGGAGCTCAGAAGCTGTCAAGGATATAAGCAGTG...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTGCTGGCAAGGTCAAATaGGGTGTTTTCCCAACCTTA +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFAGKVK*GVFPTL
Trigger: TAAGGTTGGGAAAACACCTCATTTGACCTTGCCAGC...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTCTAATCAGAGGAGAGTaGAGAGGAGGCGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: FVILLHLGQHLPRYAGITLIRGE*RGGAAF
Trigger: GAAGGCAGCGCCTCCTCTTCACTCTCCTCTGATTAG...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATGTTTTGTTCATGACTTaGAGGGACCCCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDVLFMT*RDPSST
Trigger: TGTGGAGCTGGGGTCCCTGCAAGTCATGAACAAAAC...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATGGCTCATGCATGGCCTaGCACGAGGGGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYGSCMA*HEGEEQ
Trigger: CTGCTCTTCCCCCTCGTGGCAGGCCATGCATGAGCC...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTGGCTCATGCATGGCCTaGCACGAGGGGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFGSCMA*HEGEEQ
Trigger: CTGCTCTTCCCCCTCGTGGCAGGCCATGCATGAGCC...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTTGTGAAGTAGTCCTTTaGATAATCAAATCCATGCTT +
Preference number: 4 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVCEVVL*IIKSML
Trigger: AAGCATGGATTTGATTATGCAAAGGACTACTTCACA...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGCAGATGTATCCTCAATaGATTGCCACTTCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRQMYPQ*IATSAP
Trigger: CGGGGCAGAAGTGGCAATGCATTGAGGATACATCTG...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGAGGTTCCGCGTGCTCTaGCGGACTGTGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERRFRVL*RTVSRS
Trigger: TGACCTGCTCACAGTCCGGCAGAGCACGCGGAACCT...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTTCTTTCTTTGGCTTCTaGTGGCACGGTAACCAGACT +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFSFFGF*WHGNQT
Trigger: AGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAAAGA...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGGACAAGGAACGTGTCTaGCGAGTATGGACAAATCTG +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWDKERV*RVWTNL
Trigger: CAGATTTGTCCATACTCGGCAGACACGTTCCTTGTC...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTGTTTTCCCAACCTTATaGCTTGGGTCTTCATCTGAG +
Preference number: 4 (lower is better)
Translates to: AISIDTACSAETTKNPSLVFPTL*LGSSSE
Trigger: CTCAGATGAAGACCCAAGGCATAAGGTTGGGAAAAC...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATGTTTTCCCAACCTTATaGCTTGGGTCTTCATCTGAG +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHVFPTL*LGSSSE
Trigger: CTCAGATGAAGACCCAAGGCATAAGGTTGGGAAAAC...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATCACCGCTTGCTCACATaGTCACTAGCTTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDHRLLT*SLASTA
Trigger: TGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTG...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGCACCGCTTGCTCACATaGTCACTAGCTTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRHRLLT*SLASTA
Trigger: TGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTG...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGCTCGCTCCTGGCCTCTaGGCCTGGGGTTTCCTAGTT +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERLAPGL*AWGFLV
Trigger: AACTAGGAAACCCCAGGCGCAGAGGCCAGGAGCGAG...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR CCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAATCCGAGGCTCATGCATaGCCTGCCACGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSESEAHA*PATRGK
Trigger: CTTCCCCCTCGTGGCAGGCCATGCATGAGCCTCGGA...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAACTAGGAGTTATGTGTTaGGAAGCATTGGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQLGVMC*EALGYS
Trigger: ACTGTACCCCAATGCTTCCCAACACATAACTCCTAG...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGTCGAAACCTGTTACCTaGCTTTTCTGGGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWSKPVT*LFWVQK
Trigger: CTTCTGGACCCAGAAAAGCCAGGTAACAGGTTTCGA...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTGTTCACAGGCTGTCTaGTACCTGGCCTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FVILLHLGQHLPRYAGITCSQAV*YLACWH
Trigger: ATGCCAGCAGGCCAGGTACCAGACAGCCTGTGAACA...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTAGCCTGGAGATCTCTTaGCCCCTTGTGGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFSLEIS*PLVAFI
Trigger: GATGAAGGCCACAAGGGGCCAAGAGATCTCCAGGCT...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTTCGGACAGTGGTAGGTaGGCCCACGGCGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TDDTHIRQAANLNICTESSDSGR*AHGVAA
Trigger: AGCAGCAACGCCGTGGGCCCACCTACCACTGTCCGA...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CCA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTGGTCCTTCCACGCTCTaGCCGATTGGTACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFGPSTL*PIGTVL
Trigger: GAGAACTGTACCAATCGGCCAGAGCGTGGAAGGACC...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTGATTCTTCTCCACCTTaGTCAACATCTTCCCCGCTA +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFDSSPP*STSSPL
Trigger: TAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATC...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGCCTGGCCTCTGCGCCTaGGGTTTCCTAGTTGCCGAT +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERPGLCA*GFLVAD
Trigger: ATCGGCAACTAGGAAACCCCAGGCGCAGAGGCCAGG...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR TCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGCCAATGTTGCAAAACTaGCAAAATGTCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWPMLQN*QNVSVS
Trigger: GGAGACGGAGACATTTTGTCAGTTTTGCAACATTGG...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTTTCTCGTTTTGTTCATaGCTTGCAGGGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCFSFCS*LAGTPA
Trigger: AGCTGGGGTCCCTGCAAGTCATGAACAAAACGAGAA...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTGCACATACTTCCCGGTaGGCATGGAGGACCGTGACG +
Preference number: 4 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTAHTSR*AWRTVT
Trigger: CGTCACGGTCCTCCATGCTCACCGGGAAGTATGTGC...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTGCACATACTTCCCGGTaGGCATGGAGGACCGTGACG +
Preference number: 4 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVAHTSR*AWRTVT
Trigger: CGTCACGGTCCTCCATGCTCACCGGGAAGTATGTGC...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTCACAGAATCATCCACTaGCATCAAAGTCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCHRIIH*HQSLEP
Trigger: AGGCTCCAGACTTTGATGTCAGTGGATGATTCTGTG...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTTGCTCTGCCGGACTGTaGGCAGGTCACTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: TDDTHIRQAANLNICTESCSAGL*AGHWVL
Trigger: AAGGACCCAGTGACCTGCTCACAGTCCGGCAGAGCA...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR TCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTCTCAAGAATTGCCGTTaGCTCTTTCTTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFLKNCR*LFLWLL
Trigger: CAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGAG...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTCCTGAGCAGCCTCCTTaGATGGGTGAAGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPPEQPP*MGEDGS
Trigger: AGAGCCATCTTCACCCATTCAAGGAGGCTGCTCAGG...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCACCTGAGCAGCCTCCTTaGATGGGTGAAGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSPEQPP*MGEDGS
Trigger: AGAGCCATCTTCACCCATTCAAGGAGGCTGCTCAGG...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTATCCTTGACAGCTTCTaGGCTCCATTAGTTGTACGT +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFILDSF*APLVVR
Trigger: ACGTACAACTAATGGAGCTCAGAAGCTGTCAAGGAT...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTGCAGTGAGACGGGGCTaGTTAACCTTCCCATCCATC +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPAVRRG*LTFPSI
Trigger: GATGGATGGGAAGGTTAATCAGCCCCGTCTCACTGC...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTGCAGTGAGACGGGGCTaGTTAACCTTCCCATCCATC +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFAVRRG*LTFPSI
Trigger: GATGGATGGGAAGGTTAATCAGCCCCGTCTCACTGC...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGCAGTGAGACGGGGCTaGTTAACCTTCCCATCCATC +
Preference number: 4 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSAVRRG*LTFPSI
Trigger: GATGGATGGGAAGGTTAATCAGCCCCGTCTCACTGC...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAAATCGGTTTCCAGATaGTTAGTCTCTTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWKSVSR*LVSSCP
Trigger: GGGGCATGAAGAGACTAATCATCTGGAAACCGATTT...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTTCATGCCATCGCCACTaGAATCGGTTTCCAGATGAT +
Preference number: 4 (lower is better)
Translates to: FPTLCLGSSSESAEAISISCHRH*NRFPDD
Trigger: ATCATCTGGAAACCGATTTCAGTGGCGATGGCATGA...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTGAACATCTGATGAACTaGAATTCCATCGGAATGCAC +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAEHLMN*NSIGMH
Trigger: GTGCATTCCGATGGAATTTCAGTTCATCAGATGTTC...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTCTAATCAGAGGAGAGTaGAGAGGAGGCGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPLIRGE*RGGAAF
Trigger: GAAGGCAGCGCCTCCTCTTCACTCTCCTCTGATTAG...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGGCAGTGGAAGTGTGTTaGAAGATTTACCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRAVEVC*KIYQGC
Trigger: ACACCCCTGGTAAATCTTTCAACACACTTCCACTGC...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTGTTTTGTTCATGACTTaGAGGGACCCCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPVLFMT*RDPSST
Trigger: TGTGGAGCTGGGGTCCCTGCAAGTCATGAACAAAAC...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTGGCTCATGCATGGCCTaGCACGAGGGGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCGSCMA*HEGEEQ
Trigger: CTGCTCTTCCCCCTCGTGGCAGGCCATGCATGAGCC...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTAAAGTCCGAGGCTCATaGATGGCCTGCCACGAGGGG +
Preference number: 4 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFKVRGS*MACHEG
Trigger: CCCCTCGTGGCAGGCCATGCATGAGCCTCGGACTTT...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTAAAGTCCGAGGCTCATaGATGGCCTGCCACGAGGGG +
Preference number: 4 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVKVRGS*MACHEG
Trigger: CCCCTCGTGGCAGGCCATGCATGAGCCTCGGACTTT...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTGTATCCTCAATGCATTaGCACTTCTGCCCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCVSSMH*HFCPGC
Trigger: ACAACCGGGGCAGAAGTGGCAATGCATTGAGGATAC...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTGTGAATTCGAAGCTTaGCAGATGTATCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: AISIDTACSAETTKNPSLCEFEA*QMYPQC
Trigger: GCATTGAGGATACATCTGGCAAGCTTCGAATTCACA...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTTCTTTCTTTGGCTTCTaGTGGCACGGTAACCAGACT +
Preference number: 4 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCSFFGF*WHGNQT
Trigger: AGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAAAGA...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGTATCTGCCAGCATCCTaGCCCTGTTGCCACCACTGG +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERYLPAS*PCCHHW
Trigger: CCAGTGGTGGCAACAGGGGCAGGATGCTGGCAGATA...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGGGCGTTGCTGCTATCTaGCAGCATCCTGCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERGVAAI*QHPAPV
Trigger: AACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCC...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp ATTAGTCCAGTCCACCAGACTAAGTCTGTAGTTTTGTCTGTACTCATAGATGTTGGCCCACGGCGTTGCTaGTATCTGCCAGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: ISPVHQTKSVVLSVLIDVGPRRC*YLPASC
Trigger: GCAGGATGCTGGCAGATAGCAGCAACGCCGTGGGCC...AACATCTATGAGTACAGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTCAGTGGTTGTTGTCATaGGTGAAGCAAGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPQWLLS*VKQVRP
Trigger: TGGCCTCACTTGCTTCACGCATGACAACAACCACTG...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTCAGTGGTTGTTGTCATaGGTGAAGCAAGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCQWLLS*VKQVRP
Trigger: TGGCCTCACTTGCTTCACGCATGACAACAACCACTG...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCAGAACGGGGCTGTCTaGCAGTGGTTGTTGTCATGC +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLQNGAV*QWLLSC
Trigger: GCATGACAACAACCACTGGCAGACAGCCCCGTTCTG...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCACAGAACGGGGCTGTCTaGCAGTGGTTGTTGTCATGC +
Preference number: 4 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSQNGAV*QWLLSC
Trigger: GCATGACAACAACCACTGGCAGACAGCCCCGTTCTG...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTTTGCCAGTTGATGTCTaGAGTGAGACGGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPLPVDV*SETGLI
Trigger: AATCAGCCCCGTCTCACTGCAGACATCAACTGGCAA...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTGTTCTTTCGGGTGCCTaGGAATGGGCTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFVLSGA*EWAAAW
Trigger: CCAGGCTGCAGCCCATTCGCAGGCACCCGAAAGAAC...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATGTTCTTTCGGGTGCCTaGGAATGGGCTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYVLSGA*EWAAAW
Trigger: CCAGGCTGCAGCCCATTCGCAGGCACCCGAAAGAAC...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGGTGAAGAGGAGGCGCTaGCTTCTAGGTGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLVKRRR*LLGAVT
Trigger: AGTCACAGCACCTAGAAGGCAGCGCCTCCTCTTCAC...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGCTCACTAGCTTCTACTaGACAAAGGTACCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRLTSFY*TKVPRV
Trigger: TACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAG...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAATCATAACGGGCCTATaGGGATACATTCTCTTAGAC +
Preference number: 4 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQIITGL*GYILLD
Trigger: GTCTAAGAGAATGTATCCCCATAGGCCCGTTATGAT...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATCCGTGGGGCGCAGCGTaGCTGATCACCATCATAACG +
Preference number: 4 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYPWGAA*LITIIT
Trigger: CGTTATGATGGTGATCAGCCACGCTGCGCCCCACGG...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTCCGTGGGGCGCAGCGTaGCTGATCACCATCATAACG +
Preference number: 4 (lower is better)
Translates to: TDDTHIRQAANLNICTESPWGAA*LITIIT
Trigger: CGTTATGATGGTGATCAGCCACGCTGCGCCCCACGG...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGCTAGGAGTTATGTGTTaGGAAGCATTGGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWLGVMC*EALGYS
Trigger: ACTGTACCCCAATGCTTCCCAACACATAACTCCTAG...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTTCTTTGGCTTCTGCTaGCACGGTAACCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: FVILLHLGQHLPRYAGITFFGFC*HGNQTP
Trigger: GGGAGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAA...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATTCTGGGCTTGTACTTTaGAGTCCCCTGGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDSGLVL*SPLVSQ
Trigger: TTGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGA...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTCTGGGCTTGTACTTTaGAGTCCCCTGGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRSGLVL*SPLVSQ
Trigger: TTGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGA...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCCCTGTTGCCACCACTaGAAGCCTGGAGATCTCTTG +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLPCCHH*KPGDLL
Trigger: CAAGAGATCTCCAGGCTTCCAGTGGTGGCAACAGGG...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTCACGCTCTGGCCGATTaGTACAGTTCTCTCTCACAA +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCHALAD*YSSLSQ
Trigger: TTGTGAGAGAGAACTGTACCAATCGGCCAGAGCGTG...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGGTCCTTCCACGCTCTaGCCGATTGGTACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSGPSTL*PIGTVL
Trigger: GAGAACTGTACCAATCGGCCAGAGCGTGGAAGGACC...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTCTTCCCCGCTATGCTaGAATTACTTCGGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRSSPLC*NYFGVL
Trigger: CAGAACACCGAAGTAATTCCAGCATAGCGGGGAAGA...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTGGAGCAGAGATAAGGTaGCAGCGGGACTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPGAEIR*QRDFLP
Trigger: AGGAAGGAAGTCCCGCTGCCACCTTATCTCTGCTCC...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR TCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTAATGTCTCCGTCTCCTaGTTTCTGGAGTTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFNVSVS*FLEFLN
Trigger: ATTCAAGAACTCCAGAAATCAGGAGACGGAGACATT...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTCTCCGTCTCCTaGTTTCTGGAGTTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWNVSVS*FLEFLN
Trigger: ATTCAAGAACTCCAGAAATCAGGAGACGGAGACATT...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTCCAATGTTGCAAAACTaGCAAAATGTCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCPMLQN*QNVSVS
Trigger: GGAGACGGAGACATTTTGTCAGTTTTGCAACATTGG...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTAGAAGCGAGAATTCTTaGTTAATCCAAGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: AISIDTACSAETTKNPSLRSENS*LIQAIL
Trigger: GAGAATGGCTTGGATTAATCAAGAATTCTCGCTTCT...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGGGTCCTTTACACTTGTaGATTCGAAGCTTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRGPLHL*IRSLPD
Trigger: ATCTGGCAAGCTTCGAATTCACAAGTGTAAAGGACC...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATCTCAAGAATTGCCGTTaGCTCTTTCTTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDLKNCR*LFLWLL
Trigger: CAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGAG...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTCTCAAGAATTGCCGTTaGCTCTTTCTTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: FPTLCLGSSSESAEAISILKNCR*LFLWLL
Trigger: CAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGAG...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTTTGTGGCCTTCATCATaGCGCTTAGCAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFLWPSS*RLAMFL
Trigger: AAGAAACATTGCTAAGCGTCATGATGAAGGCCACAA...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGCCTCCTTGAATGGGTaGAGATGGCTCTTTAATTTC +
Preference number: 4 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCASLNG*RWLFNF
Trigger: GAAATTAAAGAGCCATCTTCACCCATTCAAGGAGGC...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCTTGCTATCTACTTCCTaGGCAGCCTCCTTGAATGGG +
Preference number: 4 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCLLSTS*AASLNG
Trigger: CCCATTCAAGGAGGCTGCTCAGGAAGTAGATAGCAA...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGTGCACTGTATTTGTaGGCTGATAAGGATCTGTAT +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVACALYL*ADKDLY
Trigger: ATACAGATCCTTATCAGCTCACAAATACAGTGCACA...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTGTGCACTGTATTTGTaGGCTGATAAGGATCTGTAT +
Preference number: 4 (lower is better)
Translates to: AISIDTACSAETTKNPSLCALYL*ADKDLY
Trigger: ATACAGATCCTTATCAGCTCACAAATACAGTGCACA...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTCACTGCTTATATCCTTaGCAGCTTCTGAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: FPTLCLGSSSESAEAISIHCLYP*QLLSSI
Trigger: AATGGAGCTCAGAAGCTGTCAAGGATATAAGCAGTG...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTAAATCGGTTTCCAGATaGTTAGTCTCTTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: FPTLCLGSSSESAEAISIKSVSR*LVSSCP
Trigger: GGGGCATGAAGAGACTAATCATCTGGAAACCGATTT...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTTTGACTTTGTCACAATaGCAGCCAACAGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCLTLSQ*QPTVRL
Trigger: CAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAA...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTCTCTTGTGGTATGTTaGAATTGTGGAGCATTCATG +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVASLVVC*NCGAFM
Trigger: CATGAATGCTCCACAATTTCAACATACCACAAGAGA...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR TCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTCTGTCATCCCACCGATaGTACACACATCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFLSSHR*YTHQAS
Trigger: GCTTGCCTGATGTGTGTATCATCGGTGGGATGACAG...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR TCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTGAAGTGCTCGCAAGATaGAGACGGTTATATAAGCCC +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPEVLAR*RRLYKP
Trigger: GGGCTTATATAACCGTCTTCATCTTGCGAGCACTTC...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419716.7
CDS-3UTR GCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGTCTGGTACCTGGCCTaGTGGCATAGTTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSVWYLA*WHSSLT
Trigger: GGTCAAAGAACTATGCCAGCAGGCCAGGTACCAGAC...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTCTTGGTTGCAACACTTaGAATTCTTCTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVALGCNT*NSSSSS
Trigger: GGAAGAAGAAGAAGAATTGCAAGTGTTGCAACCAAG...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTGGCGTTGCTGCTATCTaGCAGCATCCTGCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFGVAAI*QHPAPV
Trigger: AACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCC...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAGGCCCACGGCGTTGCTaGTATCTGCCAGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKGPRRC*YLPASC
Trigger: GCAGGATGCTGGCAGATAGCAGCAACGCCGTGGGCC...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAGTGGGCCCACGGCGTTaGTGCTATCTGCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKVGPRR*CYLPAS
Trigger: GGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCAC...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTCTCTTTGTCAATGTATaGCTTATGGTCCTTCCACGC +
Preference number: 4 (lower is better)
Translates to: FPTLCLGSSSESAEAISILFVNV*LMVLPR
Trigger: GCGTGGAAGGACCATAAGGCATACATTGACAAAGAG...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTAATAGCTTTGTTTACTaGAGCTACATTCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: AISIDTACSAETTKNPSLNSFVY*SYIPQA
Trigger: AGCCTGAGGAATGTAGCTGCAGTAAACAAAGCTATT...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAATAGCTTTGTTTACTaGAGCTACATTCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQNSFVY*SYIPQA
Trigger: AGCCTGAGGAATGTAGCTGCAGTAAACAAAGCTATT...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTCAGTGGTTGTTGTCATaGGTGAAGCAAGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FVILLHLGQHLPRYAGITQWLLS*VKQVRP
Trigger: TGGCCTCACTTGCTTCACGCATGACAACAACCACTG...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTACATCTTCCCCGCTATaGTGGAATTACTTCGGTGTT +
Preference number: 4 (lower is better)
Translates to: FPTLCLGSSSESAEAISITSSPL*WNYFGV
Trigger: AACACCGAAGTAATTCCAGCATAGCGGGGAAGATGT...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTCTCACTAGCTTCTACTaGACAAAGGTACCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPLTSFY*TKVPRV
Trigger: TACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAG...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATAGCAGTTCTCGTTGTTaGTGTAGACATTGTGATTGT +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHSSSRC*CRHCDC
Trigger: ACAATCACAATGTCTACACCAACAACGAGAACTGCT...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTCTAGGAGTTATGTGTTaGGAAGCATTGGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCLGVMC*EALGYS
Trigger: ACTGTACCCCAATGCTTCCCAACACATAACTCCTAG...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTTCGAAACCTGTTACCTaGCTTTTCTGGGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCSKPVT*LFWVQK
Trigger: CTTCTGGACCCAGAAAAGCCAGGTAACAGGTTTCGA...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTTTCTTTGGCTTCTGCTaGCACGGTAACCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFFFGFC*HGNQTP
Trigger: GGGAGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAA...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGGGCTTGTACTTTaGAGTCCCCTGGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCSGLVL*SPLVSQ
Trigger: TTGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGA...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCGTGTCTGCCGAGTATaGACAAATCTGGGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFRVCRV*TNLGLY
Trigger: GTACAAGCCCAGATTTGTCCATACTCGGCAGACACG...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATTCATTACGCAGGCAGTaGAAGTGTGTTGAAAGATTT +
Preference number: 4 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHSLRRQ*KCVERF
Trigger: AAATCTTTCAACACACTTCCACTGCCTGCGTAATGA...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAGCAGATAGGGTCCTTTaGAGATTTTCTGCAATTATT +
Preference number: 4 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQADRVL*RFSAII
Trigger: AATAATTGCAGAAAATCTTCAAAGGACCCTATCTGC...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAGAAGCGAGAATTCTTaGTTAATCCAAGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWRSENS*LIQAIL
Trigger: GAGAATGGCTTGGATTAATCAAGAATTCTCGCTTCT...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTGGTCGGCGGTGTAAATaGTGTAAGTATTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFGRRCK*CKYSPA
Trigger: AGCTGGAGAATACTTACATCATTTACACCGCCGACC...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTGATCTGTGGGACTATTaGTCCTGGTTCTACACTTGG +
Preference number: 4 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFDLWDY*SWFYTW
Trigger: CCAAGTGTAGAACCAGGATCAATAGTCCCACAGATC...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAACTGGGTCCAGAAGTTTaGGGACAGACTTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSELGPEV*GQTCRP
Trigger: TGGACGGCAAGTCTGTCCTCAAACTTCTGGACCCAG...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTGGTCCTTTACACTTGTaGATTCGAAGCTTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPGPLHL*IRSLPD
Trigger: ATCTGGCAAGCTTCGAATTCACAAGTGTAAAGGACC...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTTTGTGGCCTTCATCATaGCGCTTAGCAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FPTLCLGSSSESAEAISILWPSS*RLAMFL
Trigger: AAGAAACATTGCTAAGCGTCATGATGAAGGCCACAA...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGTACGGTTGTTCTCCTTaGAAAGTTGCAGTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWYGCSP*KVAVCY
Trigger: ATAGCAAACTGCAACTTTTCAAGGAGAACAACCGTA...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATAGTTGTACGTGTAGCTaGTTCAAAATGCCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDSCTCS*FKMPRS
Trigger: AGAACGAGGCATTTTGAATCAGCTACACGTACAACT...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTAGTTGTACGTGTAGCTaGTTCAAAATGCCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: FPTLCLGSSSESAEAISISCTCS*FKMPRS
Trigger: AGAACGAGGCATTTTGAATCAGCTACACGTACAACT...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCATGCCATCGCCACTaGAATCGGTTTCCAGATGAT +
Preference number: 4 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCSCHRH*NRFPDD
Trigger: ATCATCTGGAAACCGATTTCAGTGGCGATGGCATGA...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATGAACATCTGATGAACTaGAATTCCATCGGAATGCAC +
Preference number: 4 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDEHLMN*NSIGMH
Trigger: GTGCATTCCGATGGAATTTCAGTTCATCAGATGTTC...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAGAATGTTGGTGGCTGTaGTTACCTTTATTAGTTTAC +
Preference number: 4 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQECWWL*LPLLVY
Trigger: GTAAACTAATAAAGGTAATCACAGCCACCAACATTC...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTGCAGTGGAAGTGTGTTaGAAGATTTACCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: FVILLHLGQHLPRYAGITAVEVC*KIYQGC
Trigger: ACACCCCTGGTAAATCTTTCAACACACTTCCACTGC...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTGCAGTGGAAGTGTGTTaGAAGATTTACCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFAVEVC*KIYQGC
Trigger: ACACCCCTGGTAAATCTTTCAACACACTTCCACTGC...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTTTGACTTTGTCACAATaGCAGCCAACAGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCLTLSQ*QPTVRL
Trigger: CAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAA...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTATGTCAAACAATATGTaGTCCATACTGTGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFMSNNM*SILCVV
Trigger: GACGACACACAGTATGGATCACATATTGTTTGACAT...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTGCTTCTAGACTTTCCTaGAGCCAGAATTGTTCTATA +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFASRLS*SQNCSI
Trigger: TATAGAACAATTCTGGCTTCAGGAAAGTCTAGAAGC...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR GCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTTCTCCATTCCAATTATaGTCTCTTCAAGAGTATGGG +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFSPFQL*SLQEYG
Trigger: CCCATACTCTTGAAGAGAGCATAATTGGAATGGAGA...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260128.8
ENST00000402687.9
CDS-3UTR GCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAAAAGTCCGAGGCTCATaGATGGCCTGCCACGAGGGG +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKKVRGS*MACHEG
Trigger: CCCCTCGTGGCAGGCCATGCATGAGCCTCGGACTTT...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTACTGTTGGATATTCTTaGTGGATTCTTCCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVATVGYS*WILPSY
Trigger: GTAAGAAGGAAGAATCCAGCAAGAATATCCAACAGT...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCACAGATGTATCCTCAATaGATTGCCACTTCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSQMYPQ*IATSAP
Trigger: CGGGGCAGAAGTGGCAATGCATTGAGGATACATCTG...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATCAGACTCCCTACAACTaGACTCTTTGTCTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDQTPYN*TLCLCH
Trigger: ATGACAAAGACAAAGAGTGCAGTTGTAGGGAGTCTG...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGCTTGGTTGCAACACTTaGAATTCTTCTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWLGCNT*NSSSSS
Trigger: GGAAGAAGAAGAAGAATTGCAAGTGTTGCAACCAAG...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATAGCTTTGTTTACTaGAGCTACATTCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWNSFVY*SYIPQA
Trigger: AGCCTGAGGAATGTAGCTGCAGTAAACAAAGCTATT...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTCAGAACGGGGCTGTCTaGCAGTGGTTGTTGTCATGC +
Preference number: 4 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTQNGAV*QWLLSC
Trigger: GCATGACAACAACCACTGGCAGACAGCCCCGTTCTG...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGTTGCCAGTTGATGTCTaGAGTGAGACGGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLLPVDV*SETGLI
Trigger: AATCAGCCCCGTCTCACTGCAGACATCAACTGGCAA...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTTTGCCAGTTGATGTCTaGAGTGAGACGGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFLPVDV*SETGLI
Trigger: AATCAGCCCCGTCTCACTGCAGACATCAACTGGCAA...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTACATCTTCCCCGCTATaGTGGAATTACTTCGGTGTT +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCTSSPL*WNYFGV
Trigger: AACACCGAAGTAATTCCAGCATAGCGGGGAAGATGT...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTGTGAAGAGGAGGCGCTaGCTTCTAGGTGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFVKRRR*LLGAVT
Trigger: AGTCACAGCACCTAGAAGGCAGCGCCTCCTCTTCAC...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTCACCGCTTGCTCACATaGTCACTAGCTTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFHRLLT*SLASTA
Trigger: TGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTG...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTCACCGCTTGCTCACATaGTCACTAGCTTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPHRLLT*SLASTA
Trigger: TGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTG...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCTCGTTCTACCGTGTaGACTGTATTTGTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFPRSTV*TVFVRV
Trigger: AACCCTCACAAATACAGTGCACACGGTAGAACGAGG...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531512.5
CDS-3UTR CCA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTTGTTCACAGGCTGTCTaGTACCTGGCCTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVCSQAV*YLACWH
Trigger: ATGCCAGCAGGCCAGGTACCAGACAGCCTGTGAACA...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCTGGGCTTGTACTTTaGAGTCCCCTGGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: FVILLHLGQHLPRYAGITSGLVL*SPLVSQ
Trigger: TTGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGA...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTGAGTATGGACAAATCTaGGCTTGTACTTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCEYGQI*ACTLES
Trigger: GGACTCCAAAGTACAAGCCCAGATTTGTCCATACTC...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTAGCCTGGAGATCTCTTaGCCCCTTGTGGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTSLEIS*PLVAFI
Trigger: GATGAAGGCCACAAGGGGCCAAGAGATCTCCAGGCT...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTAGCCTGGAGATCTCTTaGCCCCTTGTGGCCTTCATC +
Preference number: 4 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFSLEIS*PLVAFI
Trigger: GATGAAGGCCACAAGGGGCCAAGAGATCTCCAGGCT...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp ATTAGTCCAGTCCACCAGACTAAGTCTGTAGTTTTGTCTGTACTCATAGATGTTCCACCACTGGAAGCCTaGAGATCTCTTGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: ISPVHQTKSVVLSVLIDVPPLEA*RSLGPL
Trigger: CAAGGGGCCAAGAGATCTCCAGGCTTCCAGTGGTGG...AACATCTATGAGTACAGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTCCCTGTTGCCACCACTaGAAGCCTGGAGATCTCTTG +
Preference number: 4 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVPCCHH*KPGDLL
Trigger: CAAGAGATCTCCAGGCTTCCAGTGGTGGCAACAGGG...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTTCAATGTATGCCTTATaGTCCTTCCACGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFSMYAL*SFHALA
Trigger: GGCCAGAGCGTGGAAGGACCATAAGGCATACATTGA...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAGGGGCTGTCTGCCAGTaGTTGTTGTCATGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEGAVCQ*LLSCVK
Trigger: CTTCACGCATGACAACAACCACTGGCAGACAGCCCC...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATGGGGCTGTCTGCCAGTaGTTGTTGTCATGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYGAVCQ*LLSCVK
Trigger: CTTCACGCATGACAACAACCACTGGCAGACAGCCCC...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGTTAGATGATGGTGGGTaGCCGTCAGCACAAAAGCCG +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERLDDGG*PSAQKP
Trigger: CGGCTTTTGTGCTGACGGCCACCCACCATCATCTAA...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419716.7
3UTR CAA 72 bp GTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTaGCTCACATGCTCACTAGCTTCTACTGCACAAAGG +
Preference number: 4 (lower is better)
Translates to: VNYNDESPCAHR*LTCSLASTAQR
Trigger: CCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTATTTACTGGTCACACTaGAGAAGGATGAACTTATTG +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFIYWSH*RRMNLL
Trigger: CAATAAGTTCATCCTTCTTCAGTGTGACCAGTAAAT...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260128.8
ENST00000402687.9
CDS-3UTR TCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCATTTATCTTCTTTAGATaGTGGTGGGTGGCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSFIFFR*WWVAVS
Trigger: GCTGACGGCCACCCACCATCATCTAAAGAAGATAAA...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTGCAATTATTCTGCCTTaGAGAACCTGCATGTCATTT +
Preference number: 4 (lower is better)
Translates to: FPTLCLGSSSESAEAISIAIILP*RTCMSF
Trigger: AAATGACATGCAGGTTCTTCAAGGCAGAATAATTGC...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATGCAATTATTCTGCCTTaGAGAACCTGCATGTCATTT +
Preference number: 4 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDAIILP*RTCMSF
Trigger: AAATGACATGCAGGTTCTTCAAGGCAGAATAATTGC...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCCCAATGTTGCAAAACTaGCAAAATGTCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCPMLQN*QNVSVS
Trigger: GGAGACGGAGACATTTTGTCAGTTTTGCAACATTGG...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGGGTCGGCGGTGTAAATaGTGTAAGTATTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLGRRCK*CKYSPA
Trigger: AGCTGGAGAATACTTACATCATTTACACCGCCGACC...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTGATCTGTGGGACTATTaGTCCTGGTTCTACACTTGG +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPDLWDY*SWFYTW
Trigger: CCAAGTGTAGAACCAGGATCAATAGTCCCACAGATC...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGATCTGTGGGACTATTaGTCCTGGTTCTACACTTGG +
Preference number: 4 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSDLWDY*SWFYTW
Trigger: CCAAGTGTAGAACCAGGATCAATAGTCCCACAGATC...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTTTGGGCAAGTGATTTaGCTGTTGGATATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRFGQVI*LLDILA
Trigger: AGCAAGAATATCCAACAGTCAAATCACTTGCCCAAA...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTTTGTGGCCTTCATCATaGCGCTTAGCAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPLWPSS*RLAMFL
Trigger: AAGAAACATTGCTAAGCGTCATGATGAAGGCCACAA...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTCCTGAGCAGCCTCCTTaGATGGGTGAAGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCPEQPP*MGEDGS
Trigger: AGAGCCATCTTCACCCATTCAAGGAGGCTGCTCAGG...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTAGTTGTACGTGTAGCTaGTTCAAAATGCCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPSCTCS*FKMPRS
Trigger: AGAACGAGGCATTTTGAATCAGCTACACGTACAACT...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTATCCTTGACAGCTTCTaGGCTCCATTAGTTGTACGT +
Preference number: 4 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFILDSF*APLVVR
Trigger: ACGTACAACTAATGGAGCTCAGAAGCTGTCAAGGAT...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTGAACATCTGATGAACTaGAATTCCATCGGAATGCAC +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCEHLMN*NSIGMH
Trigger: GTGCATTCCGATGGAATTTCAGTTCATCAGATGTTC...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTGAATGTTGGTGGCTGTaGTTACCTTTATTAGTTTAC +
Preference number: 4 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFECWWL*LPLLVY
Trigger: GTAAACTAATAAAGGTAATCACAGCCACCAACATTC...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATTCTCTTGTGGTATGTTaGAATTGTGGAGCATTCATG +
Preference number: 4 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDSLVVC*NCGAFM
Trigger: CATGAATGCTCCACAATTTCAACATACCACAAGAGA...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR GCA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTTCTCCATTCCAATTATaGTCTCTTCAAGAGTATGGG +
Preference number: 4 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCSPFQL*SLQEYG
Trigger: CCCATACTCTTGAAGAGAGCATAATTGGAATGGAGA...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260128.8
ENST00000402687.9
CDS-3UTR GCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGGTTTTGTTCATGACTTaGAGGGACCCCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERVLFMT*RDPSST
Trigger: TGTGGAGCTGGGGTCCCTGCAAGTCATGAACAAAAC...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAGTCTGGTACCTGGCCTaGTGGCATAGTTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEVWYLA*WHSSLT
Trigger: GGTCAAAGAACTATGCCAGCAGGCCAGGTACCAGAC...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGGTATCCTCAATGCATTaGCACTTCTGCCCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERVSSMH*HFCPGC
Trigger: ACAACCGGGGCAGAAGTGGCAATGCATTGAGGATAC...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGGACAAGGAACGTGTCTaGCGAGTATGGACAAATCTG +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLDKERV*RVWTNL
Trigger: CAGATTTGTCCATACTCGGCAGACACGTTCCTTGTC...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTGACAAGGAACGTGTCTaGCGAGTATGGACAAATCTG +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPDKERV*RVWTNL
Trigger: CAGATTTGTCCATACTCGGCAGACACGTTCCTTGTC...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGCAGTGGTTGTTGTCATaGGTGAAGCAAGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERQWLLS*VKQVRP
Trigger: TGGCCTCACTTGCTTCACGCATGACAACAACCACTG...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTACATCTTCCCCGCTATaGTGGAATTACTTCGGTGTT +
Preference number: 4 (lower is better)
Translates to: FVILLHLGQHLPRYAGITTSSPL*WNYFGV
Trigger: AACACCGAAGTAATTCCAGCATAGCGGGGAAGATGT...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTATCATAACGGGCCTATaGGGATACATTCTCTTAGAC +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPIITGL*GYILLD
Trigger: GTCTAAGAGAATGTATCCCCATAGGCCCGTTATGAT...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGTGGATGGGCAGCATTaGTCCTGTGTACTGCATAAT +
Preference number: 4 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSVDGQH*SCVLHN
Trigger: ATTATGCAGTACACAGGACCAATGCTGCCCATCCAC...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGGTGGATGGGCAGCATTaGTCCTGTGTACTGCATAAT +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLVDGQH*SCVLHN
Trigger: ATTATGCAGTACACAGGACCAATGCTGCCCATCCAC...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTTGGTACCTGGCCTGCTaGCATAGTTCTTTGACCCGT +
Preference number: 4 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVWYLAC*HSSLTR
Trigger: ACGGGTCAAAGAACTATGCCAGCAGGCCAGGTACCA...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGCACGCTCTGGCCGATTaGTACAGTTCTCTCTCACAA +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERHALAD*YSSLSQ
Trigger: TTGTGAGAGAGAACTGTACCAATCGGCCAGAGCGTG...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTGGTCCTTCCACGCTCTaGCCGATTGGTACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCGPSTL*PIGTVL
Trigger: GAGAACTGTACCAATCGGCCAGAGCGTGGAAGGACC...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTGATTCTTCTCCACCTTaGTCAACATCTTCCCCGCTA +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPDSSPP*STSSPL
Trigger: TAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATC...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTGATTCTTCTCCACCTTaGTCAACATCTTCCCCGCTA +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFDSSPP*STSSPL
Trigger: TAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATC...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGTTAGATGATGGTGGGTaGCCGTCAGCACCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLLDDGG*PSAPEK
Trigger: TTTTTCAGGTGCTGACGGCCACCCACCATCATCTAA...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTGCAATTATTCTGCCTTaGAGAACCTGCATGTCATTT +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCAIILP*RTCMSF
Trigger: AAATGACATGCAGGTTCTTCAAGGCAGAATAATTGC...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGCAGATAGGGTCCTTTaGAGATTTTCTGCAATTATT +
Preference number: 4 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCADRVL*RFSAII
Trigger: AATAATTGCAGAAAATCTTCAAAGGACCCTATCTGC...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTTTCTCGTTTTGTTCATaGCTTGCAGGGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFFSFCS*LAGTPA
Trigger: AGCTGGGGTCCCTGCAAGTCATGAACAAAACGAGAA...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATTTCTCGTTTTGTTCATaGCTTGCAGGGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYFSFCS*LAGTPA
Trigger: AGCTGGGGTCCCTGCAAGTCATGAACAAAACGAGAA...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTAGAAGCGAGAATTCTTaGTTAATCCAAGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPRSENS*LIQAIL
Trigger: GAGAATGGCTTGGATTAATCAAGAATTCTCGCTTCT...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTAGAAGCGAGAATTCTTaGTTAATCCAAGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCRSENS*LIQAIL
Trigger: GAGAATGGCTTGGATTAATCAAGAATTCTCGCTTCT...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGCACAGAATCATCCACTaGCATCAAAGTCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERHRIIH*HQSLEP
Trigger: AGGCTCCAGACTTTGATGTCAGTGGATGATTCTGTG...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAGGGCCAAGTCAATGTTaGGAACGATCTGTGGGACTA +
Preference number: 4 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEGPSQC*ERSVGL
Trigger: TAGTCCCACAGATCGTTCTCAACATTGACTTGGCCC...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTTACGGTTGTTCTCCTTaGAAAGTTGCAGTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCYGCSP*KVAVCY
Trigger: ATAGCAAACTGCAACTTTTCAAGGAGAACAACCGTA...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCAGTTGTACGTGTAGCTaGTTCAAAATGCCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCSCTCS*FKMPRS
Trigger: AGAACGAGGCATTTTGAATCAGCTACACGTACAACT...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTAGTTGTACGTGTAGCTaGTTCAAAATGCCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: FVILLHLGQHLPRYAGITSCTCS*FKMPRS
Trigger: AGAACGAGGCATTTTGAATCAGCTACACGTACAACT...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTTTCAAATGCAGGGTTTaGAGGTCAGCTGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTFKCRV*RSAGKV
Trigger: GACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAA...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTTTCAAATGCAGGGTTTaGAGGTCAGCTGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVFKCRV*RSAGKV
Trigger: GACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAA...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAAAATCGGTTTCCAGATaGTTAGTCTCTTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSKSVSR*LVSSCP
Trigger: GGGGCATGAAGAGACTAATCATCTGGAAACCGATTT...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTTTGACTTTGTCACAATaGCAGCCAACAGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPLTLSQ*QPTVRL
Trigger: CAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAA...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTATGTCAAACAATATGTaGTCCATACTGTGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPMSNNM*SILCVV
Trigger: GACGACACACAGTATGGATCACATATTGTTTGACAT...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTCTGTCATCCCACCGATaGTACACACATCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCLSSHR*YTHQAS
Trigger: GCTTGCCTGATGTGTGTATCATCGGTGGGATGACAG...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR TCA 90 bp ATTAGTCCAGTCCACCAGACTAAGTCTGTAGTTTTGTCTGTACTCATAGATGTTCTGTCATCCCACCGATaGTACACACATCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: ISPVHQTKSVVLSVLIDVLSSHR*YTHQAS
Trigger: GCTTGCCTGATGTGTGTATCATCGGTGGGATGACAG...AACATCTATGAGTACAGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR TCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTGCTTCTAGACTTTCCTaGAGCCAGAATTGTTCTATA +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPASRLS*SQNCSI
Trigger: TATAGAACAATTCTGGCTTCAGGAAAGTCTAGAAGC...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTACTGTTGGATATTCTTaGTGGATTCTTCCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: FPTLCLGSSSESAEAISITVGYS*WILPSY
Trigger: GTAAGAAGGAAGAATCCAGCAAGAATATCCAACAGT...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTGTATCCTCAATGCATTaGCACTTCTGCCCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTVSSMH*HFCPGC
Trigger: ACAACCGGGGCAGAAGTGGCAATGCATTGAGGATAC...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTCAGATGTATCCTCAATaGATTGCCACTTCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: TDDTHIRQAANLNICTESQMYPQ*IATSAP
Trigger: CGGGGCAGAAGTGGCAATGCATTGAGGATACATCTG...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR GCA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTTGTGAATTCGAAGCTTaGCAGATGTATCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFCEFEA*QMYPQC
Trigger: GCATTGAGGATACATCTGGCAAGCTTCGAATTCACA...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTCAGACTCCCTACAACTaGACTCTTTGTCTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: FVILLHLGQHLPRYAGITQTPYN*TLCLCH
Trigger: ATGACAAAGACAAAGAGTGCAGTTGTAGGGAGTCTG...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTGCGCTGCCTTCTAGGTaGTGTGACTTCTCCTTTTCG +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCALPSR*CDFSFS
Trigger: CGAAAAGGAGAAGTCACAGCACCTAGAAGGCAGCGC...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAACGACGGTCTGCGAAGTaGTCGCAAGATGAAGACGGT +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKRRSAK*SQDEDG
Trigger: ACCGTCTTCATCTTGCGAGCACTTCGCAGACCGTCG...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419716.7
CDS-3UTR CCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTACTGACATCAAAGTCTaGAGCCTTTTGCGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFTDIKV*SLLRCR
Trigger: TCTACAGCGCAAAAGGCTCCAGACTTTGATGTCAGT...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGTCGAAACCTGTTACCTaGCTTTTCTGGGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERSKPVT*LFWVQK
Trigger: CTTCTGGACCCAGAAAAGCCAGGTAACAGGTTTCGA...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGGTTGGATATTCTTGCTaGATTCTTCCTTCTTACGTA +
Preference number: 4 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRVGYSC*ILPSYV
Trigger: TACGTAAGAAGGAAGAATCCAGCAAGAATATCCAAC...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAATGTTCACAGGCTGTCTaGTACCTGGCCTGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKCSQAV*YLACWH
Trigger: ATGCCAGCAGGCCAGGTACCAGACAGCCTGTGAACA...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAACGTGTCTGCCGAGTATaGACAAATCTGGGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSERVCRV*TNLGLY
Trigger: GTACAAGCCCAGATTTGTCCATACTCGGCAGACACG...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAGGTCCTTCCACGCTCTaGCCGATTGGTACAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKGPSTL*PIGTVL
Trigger: GAGAACTGTACCAATCGGCCAGAGCGTGGAAGGACC...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTTCAATGTATGCCTTATaGTCCTTCCACGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTSMYAL*SFHALA
Trigger: GGCCAGAGCGTGGAAGGACCATAAGGCATACATTGA...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTTCATTACGCAGGCAGTaGAAGTGTGTTGAAAGATTT +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPSLRRQ*KCVERF
Trigger: AAATCTTTCAACACACTTCCACTGCCTGCGTAATGA...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATCTAGAGAAAAAGCTCTaGGAACAGGGAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYLEKKL*EQGGGR
Trigger: TCTGCCTCCTCCCTGTTCCCAGAGCTTTTTCTCTAG...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
CDS-3UTR TCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTAATGTCTCCGTCTCCTaGTTTCTGGAGTTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPNVSVS*FLEFLN
Trigger: ATTCAAGAACTCCAGAAATCAGGAGACGGAGACATT...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAACACAGAATCATCCACTaGCATCAAAGTCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEHRIIH*HQSLEP
Trigger: AGGCTCCAGACTTTGATGTCAGTGGATGATTCTGTG...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTGGTCGGCGGTGTAAATaGTGTAAGTATTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFGRRCK*CKYSPA
Trigger: AGCTGGAGAATACTTACATCATTTACACCGCCGACC...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCTTTGGGCAAGTGATTTaGCTGTTGGATATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCFGQVI*LLDILA
Trigger: AGCAAGAATATCCAACAGTCAAATCACTTGCCCAAA...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTTTTGGGCAAGTGATTTaGCTGTTGGATATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFFGQVI*LLDILA
Trigger: AGCAAGAATATCCAACAGTCAAATCACTTGCCCAAA...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTTCATATTTGGGCAAGTaGTTTGACTGTTGGATATTC +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCSYLGK*FDCWIF
Trigger: GAATATCCAACAGTCAAATCACTTGCCCAAATATGA...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTGCTGGCATAGTTCTTTaGCCCGTTCATATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTAGIVL*PVHIWA
Trigger: TGCCCAAATATGAACGGGTCAAAGAACTATGCCAGC...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGATCCTTGACAGCTTCTaGGCTCCATTAGTTGTACGT +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERILDSF*APLVVR
Trigger: ACGTACAACTAATGGAGCTCAGAAGCTGTCAAGGAT...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTGCTGGCAAGGTCAAATaGGGTGTTTTCCCAACCTTA +
Preference number: 4 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTAGKVK*GVFPTL
Trigger: TAAGGTTGGGAAAACACCTCATTTGACCTTGCCAGC...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTTCATGCCATCGCCACTaGAATCGGTTTCCAGATGAT +
Preference number: 4 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTSCHRH*NRFPDD
Trigger: ATCATCTGGAAACCGATTTCAGTGGCGATGGCATGA...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGGAACATCTGATGAACTaGAATTCCATCGGAATGCAC +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLEHLMN*NSIGMH
Trigger: GTGCATTCCGATGGAATTTCAGTTCATCAGATGTTC...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTGAATGTTGGTGGCTGTaGTTACCTTTATTAGTTTAC +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCECWWL*LPLLVY
Trigger: GTAAACTAATAAAGGTAATCACAGCCACCAACATTC...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATGCAGTGGAAGTGTGTTaGAAGATTTACCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYAVEVC*KIYQGC
Trigger: ACACCCCTGGTAAATCTTTCAACACACTTCCACTGC...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTGGCAAGCAGCTAATTTaGACATATGTACAGAGTCTA +
Preference number: 4 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFGKQLI*TYVQSL
Trigger: TAGACTCTGTACATATGTTCAAATTAGCTGCTTGCC...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR GCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTGACAAGGAACGTGTCTaGCGAGTATGGACAAATCTG +
Preference number: 4 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFDKERV*RVWTNL
Trigger: CAGATTTGTCCATACTCGGCAGACACGTTCCTTGTC...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTCAGTGGTTGTTGTCATaGGTGAAGCAAGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCQWLLS*VKQVRP
Trigger: TGGCCTCACTTGCTTCACGCATGACAACAACCACTG...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTCTCACTAGCTTCTACTaGACAAAGGTACCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVLTSFY*TKVPRV
Trigger: TACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAG...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTCTCACTAGCTTCTACTaGACAAAGGTACCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFLTSFY*TKVPRV
Trigger: TACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAG...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTATCATAACGGGCCTATaGGGATACATTCTCTTAGAC +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFIITGL*GYILLD
Trigger: GTCTAAGAGAATGTATCCCCATAGGCCCGTTATGAT...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTGTGGATGGGCAGCATTaGTCCTGTGTACTGCATAAT +
Preference number: 4 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVVDGQH*SCVLHN
Trigger: ATTATGCAGTACACAGGACCAATGCTGCCCATCCAC...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTTTTGTAAATTCCATGTaGATGGGCAGCATTGGTCCT +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFFVNSM*MGSIGP
Trigger: AGGACCAATGCTGCCCATCCACATGGAATTTACAAA...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGACTGACATCAAAGTCTaGAGCCTTTTGCGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERTDIKV*SLLRCR
Trigger: TCTACAGCGCAAAAGGCTCCAGACTTTGATGTCAGT...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTGTTGGATATTCTTGCTaGATTCTTCCTTCTTACGTA +
Preference number: 4 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPVGYSC*ILPSYV
Trigger: TACGTAAGAAGGAAGAATCCAGCAAGAATATCCAAC...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAATCTTCCCCGCTATGCTaGAATTACTTCGGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSESSPLC*NYFGVL
Trigger: CAGAACACCGAAGTAATTCCAGCATAGCGGGGAAGA...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTTCTTCCCCGCTATGCTaGAATTACTTCGGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: TDDTHIRQAANLNICTESSSPLC*NYFGVL
Trigger: CAGAACACCGAAGTAATTCCAGCATAGCGGGGAAGA...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CCA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCATTACGCAGGCAGTaGAAGTGTGTTGAAAGATTT +
Preference number: 4 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCSLRRQ*KCVERF
Trigger: AAATCTTTCAACACACTTCCACTGCCTGCGTAATGA...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp ATTAGTCCAGTCCACCAGACTAAGTCTGTAGTTTTGTCTGTACTCATAGATGTTCTAGAGAAAAAGCTCTaGGAACAGGGAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ISPVHQTKSVVLSVLIDVLEKKL*EQGGGR
Trigger: TCTGCCTCCTCCCTGTTCCCAGAGCTTTTTCTCTAG...AACATCTATGAGTACAGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402687.9
ENST00000419716.7
3UTR CAA 72 bp CGTTATTCCATTCAAGTTTACTCTCTGGACTTAATGTaGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RYSIQVYSLDLM*VGSNAGFEGQL
Trigger: CAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAATAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCATTTACTGGTCACACTaGAGAAGGATGAACTTATTG +
Preference number: 4 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCIYWSH*RRMNLL
Trigger: CAATAAGTTCATCCTTCTTCAGTGTGACCAGTAAAT...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260128.8
ENST00000402687.9
CDS-3UTR TCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAACCAATGTTGCAAAACTaGCAAAATGTCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEPMLQN*QNVSVS
Trigger: GGAGACGGAGACATTTTGTCAGTTTTGCAACATTGG...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAACTCAAGAATTGCCGTTaGCTCTTTCTTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSELKNCR*LFLWLL
Trigger: CAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGAG...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTTGTGCACTGTATTTGTaGGCTGATAAGGATCTGTAT +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPCALYL*ADKDLY
Trigger: ATACAGATCCTTATCAGCTCACAAATACAGTGCACA...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGTGTGCACTGTATTTGTaGGCTGATAAGGATCTGTAT +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLCALYL*ADKDLY
Trigger: ATACAGATCCTTATCAGCTCACAAATACAGTGCACA...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAACACTGCTTATATCCTTaGCAGCTTCTGAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEHCLYP*QLLSSI
Trigger: AATGGAGCTCAGAAGCTGTCAAGGATATAAGCAGTG...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTGCTGGCAAGGTCAAATaGGGTGTTTTCCCAACCTTA +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCAGKVK*GVFPTL
Trigger: TAAGGTTGGGAAAACACCTCATTTGACCTTGCCAGC...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAATTCAAATGCAGGGTTTaGAGGTCAGCTGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKFKCRV*RSAGKV
Trigger: GACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAA...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTAAATCGGTTTCCAGATaGTTAGTCTCTTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVKSVSR*LVSSCP
Trigger: GGGGCATGAAGAGACTAATCATCTGGAAACCGATTT...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATTTGACTTTGTCACAATaGCAGCCAACAGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYLTLSQ*QPTVRL
Trigger: CAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAA...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGATGTCAAACAATATGTaGTCCATACTGTGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLMSNNM*SILCVV
Trigger: GACGACACACAGTATGGATCACATATTGTTTGACAT...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTTCTCTTGTGGTATGTTaGAATTGTGGAGCATTCATG +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFSLVVC*NCGAFM
Trigger: CATGAATGCTCCACAATTTCAACATACCACAAGAGA...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR TCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTGTACTGATGACTCAGTaGGGTAATCCTTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFVLMTQ*GNPLAG
Trigger: ACCAGCTAAAGGATTACCTCACTGAGTCATCAGTAC...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR TCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAGTACTGATGACTCAGTaGGGTAATCCTTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEVLMTQ*GNPLAG
Trigger: ACCAGCTAAAGGATTACCTCACTGAGTCATCAGTAC...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR TCA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTCTTGTTCAAGAGAAGTaGAGAATCCAAAAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: TDDTHIRQAANLNICTESLVQEK*RIQKPP
Trigger: AGGCGGCTTTTGGATTCTTCACTTCTCTTGAACAAG...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402687.9
CDS-3UTR GCA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTTTCTGCAATTATTCTaGCTTGAAGAACCTGCATGT +
Preference number: 4 (lower is better)
Translates to: FVILLHLGQHLPRYAGITFLQLF*LEEPAC
Trigger: ACATGCAGGTTCTTCAAGGCAGAATAATTGCAGAAA...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTTGTGAAGTAGTCCTTTaGATAATCAAATCCATGCTT +
Preference number: 4 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCCEVVL*IIKSML
Trigger: AAGCATGGATTTGATTATGCAAAGGACTACTTCACA...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCACTGTTGGATATTCTTaGTGGATTCTTCCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCTVGYS*WILPSY
Trigger: GTAAGAAGGAAGAATCCAGCAAGAATATCCAACAGT...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTCTTTCTTTGGCTTCTaGTGGCACGGTAACCAGACT +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCSFFGF*WHGNQT
Trigger: AGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAAAGA...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATCTCTTTGTCAATGTATaGCTTATGGTCCTTCCACGC +
Preference number: 4 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYLFVNV*LMVLPR
Trigger: GCGTGGAAGGACCATAAGGCATACATTGACAAAGAG...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAATAGCTTTGTTTACTaGAGCTACATTCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFNSFVY*SYIPQA
Trigger: AGCCTGAGGAATGTAGCTGCAGTAAACAAAGCTATT...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTCTCTCTTCAAGAGTATaGGAAGAATTTACTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPLSSRV*EEFTGH
Trigger: GTGACCAGTAAATTCTTCCCATACTCTTGAAGAGAG...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260128.8
ENST00000402687.9
CDS-3UTR CCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGAGCAGTTCTCGTTGTTaGTGTAGACATTGTGATTGT +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLSSSRC*CRHCDC
Trigger: ACAATCACAATGTCTACACCAACAACGAGAACTGCT...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCTATCACGCCAAATTTTaGCCTTCTTGTTTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCYHAKF*PSCLFE
Trigger: TTCGAACAAACAAGAAGGCCAAAATTTGGCGTGATA...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTGTTGGATATTCTTGCTaGATTCTTCCTTCTTACGTA +
Preference number: 4 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFVGYSC*ILPSYV
Trigger: TACGTAAGAAGGAAGAATCCAGCAAGAATATCCAAC...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTGAGTATGGACAAATCTaGGCTTGTACTTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: TDDTHIRQAANLNICTESEYGQI*ACTLES
Trigger: GGACTCCAAAGTACAAGCCCAGATTTGTCCATACTC...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTGATTCTTCTCCACCTTaGTCAACATCTTCCCCGCTA +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCDSSPP*STSSPL
Trigger: TAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATC...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp ATTAGTCCAGTCCACCAGACTAAGTCTGTAGTTTTGTCTGTACTCATAGATGTTGATTCTTCTCCACCTTaGTCAACATCTTCCCCGCTA +
Preference number: 4 (lower is better)
Translates to: ISPVHQTKSVVLSVLIDVDSSPP*STSSPL
Trigger: TAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATC...AACATCTATGAGTACAGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGTCATTACGCAGGCAGTaGAAGTGTGTTGAAAGATTT +
Preference number: 4 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLSLRRQ*KCVERF
Trigger: AAATCTTTCAACACACTTCCACTGCCTGCGTAATGA...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTGTGTTAGTCTCTGAGTaGGTTCCTTGTTCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: TDDTHIRQAANLNICTESVLVSE*VPCSRE
Trigger: TTCTCTTGAACAAGGAACTCACTCAGAGACTAACAC...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260128.8
ENST00000402687.9
CDS-3UTR TCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTGTGTTAGTCTCTGAGTaGGTTCCTTGTTCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTVLVSE*VPCSRE
Trigger: TTCTCTTGAACAAGGAACTCACTCAGAGACTAACAC...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260128.8
ENST00000402687.9
CDS-3UTR TCA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTGCAGATAGGGTCCTTTaGAGATTTTCTGCAATTATT +
Preference number: 4 (lower is better)
Translates to: GGLFDFVTMTANSETDKPADRVL*RFSAII
Trigger: AATAATTGCAGAAAATCTTCAAAGGACCCTATCTGC...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTGCAGATAGGGTCCTTTaGAGATTTTCTGCAATTATT +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFADRVL*RFSAII
Trigger: AATAATTGCAGAAAATCTTCAAAGGACCCTATCTGC...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAACACAGAATCATCCACTaGCATCAAAGTCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKHRIIH*HQSLEP
Trigger: AGGCTCCAGACTTTGATGTCAGTGGATGATTCTGTG...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAGGTCGGCGGTGTAAATaGTGTAAGTATTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKGRRCK*CKYSPA
Trigger: AGCTGGAGAATACTTACATCATTTACACCGCCGACC...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTGGTCCTTTACACTTGTaGATTCGAAGCTTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCGPLHL*IRSLPD
Trigger: ATCTGGCAAGCTTCGAATTCACAAGTGTAAAGGACC...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp ATTAGTCCAGTCCACCAGACTAAGTCTGTAGTTTTGTCTGTACTCATAGATGTTCACTGCTTATATCCTTaGCAGCTTCTGAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: ISPVHQTKSVVLSVLIDVHCLYP*QLLSSI
Trigger: AATGGAGCTCAGAAGCTGTCAAGGATATAAGCAGTG...AACATCTATGAGTACAGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAGCTGGCAAGGTCAAATaGGGTGTTTTCCCAACCTTA +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKAGKVK*GVFPTL
Trigger: TAAGGTTGGGAAAACACCTCATTTGACCTTGCCAGC...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAGAACATCTGATGAACTaGAATTCCATCGGAATGCAC +
Preference number: 4 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEEHLMN*NSIGMH
Trigger: GTGCATTCCGATGGAATTTCAGTTCATCAGATGTTC...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCATTTCTGCAATTATTCTaGCTTGAAGAACCTGCATGT +
Preference number: 4 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSFLQLF*LEEPAC
Trigger: ACATGCAGGTTCTTCAAGGCAGAATAATTGCAGAAA...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCTGTGAAGTAGTCCTTTaGATAATCAAATCCATGCTT +
Preference number: 4 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCCEVVL*IIKSML
Trigger: AAGCATGGATTTGATTATGCAAAGGACTACTTCACA...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTTGTGAATTCGAAGCTTaGCAGATGTATCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVCEFEA*QMYPQC
Trigger: GCATTGAGGATACATCTGGCAAGCTTCGAATTCACA...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTCAGACTCCCTACAACTaGACTCTTTGTCTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: TDDTHIRQAANLNICTESQTPYN*TLCLCH
Trigger: ATGACAAAGACAAAGAGTGCAGTTGTAGGGAGTCTG...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTCTCTTTGTCAATGTATaGCTTATGGTCCTTCCACGC +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCLFVNV*LMVLPR
Trigger: GCGTGGAAGGACCATAAGGCATACATTGACAAAGAG...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTGTTTTCCCAACCTTATaGCTTGGGTCTTCATCTGAG +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCVFPTL*LGSSSE
Trigger: CTCAGATGAAGACCCAAGGCATAAGGTTGGGAAAAC...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTATCATAACGGGCCTATaGGGATACATTCTCTTAGAC +
Preference number: 4 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVIITGL*GYILLD
Trigger: GTCTAAGAGAATGTATCCCCATAGGCCCGTTATGAT...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp ATTAGTCCAGTCCACCAGACTAAGTCTGTAGTTTTGTCTGTACTCATAGATGTTCTAGGAGTTATGTGTTaGGAAGCATTGGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: ISPVHQTKSVVLSVLIDVLGVMC*EALGYS
Trigger: ACTGTACCCCAATGCTTCCCAACACATAACTCCTAG...AACATCTATGAGTACAGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTTTTGTAAATTCCATGTaGATGGGCAGCATTGGTCCT +
Preference number: 4 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVFVNSM*MGSIGP
Trigger: AGGACCAATGCTGCCCATCCACATGGAATTTACAAA...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTACTGACATCAAAGTCTaGAGCCTTTTGCGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCTDIKV*SLLRCR
Trigger: TCTACAGCGCAAAAGGCTCCAGACTTTGATGTCAGT...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTTATCACGCCAAATTTTaGCCTTCTTGTTTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFYHAKF*PSCLFE
Trigger: TTCGAACAAACAAGAAGGCCAAAATTTGGCGTGATA...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTGAGTATGGACAAATCTaGGCTTGTACTTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCEYGQI*ACTLES
Trigger: GGACTCCAAAGTACAAGCCCAGATTTGTCCATACTC...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATGCAATTATTCTGCCTTaGAGAACCTGCATGTCATTT +
Preference number: 4 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYAIILP*RTCMSF
Trigger: AAATGACATGCAGGTTCTTCAAGGCAGAATAATTGC...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATTTTGGGCAAGTGATTTaGCTGTTGGATATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYFGQVI*LLDILA
Trigger: AGCAAGAATATCCAACAGTCAAATCACTTGCCCAAA...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp ATTAGTCCAGTCCACCAGACTAAGTCTGTAGTTTTGTCTGTACTCATAGATGTTTTGTGGCCTTCATCATaGCGCTTAGCAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: ISPVHQTKSVVLSVLIDVLWPSS*RLAMFL
Trigger: AAGAAACATTGCTAAGCGTCATGATGAAGGCCACAA...AACATCTATGAGTACAGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTTACGGTTGTTCTCCTTaGAAAGTTGCAGTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVYGCSP*KVAVCY
Trigger: ATAGCAAACTGCAACTTTTCAAGGAGAACAACCGTA...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAATTGACTTTGTCACAATaGCAGCCAACAGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKLTLSQ*QPTVRL
Trigger: CAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAA...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATATGTCAAACAATATGTaGTCCATACTGTGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYMSNNM*SILCVV
Trigger: GACGACACACAGTATGGATCACATATTGTTTGACAT...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAGTACTGATGACTCAGTaGGGTAATCCTTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKVLMTQ*GNPLAG
Trigger: ACCAGCTAAAGGATTACCTCACTGAGTCATCAGTAC...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR TCA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATGGCAAGCAGCTAATTTaGACATATGTACAGAGTCTA +
Preference number: 4 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYGKQLI*TYVQSL
Trigger: TAGACTCTGTACATATGTTCAAATTAGCTGCTTGCC...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR GCA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGTTTCTGCAATTATTCTaGCTTGAAGAACCTGCATGT +
Preference number: 4 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERFLQLF*LEEPAC
Trigger: ACATGCAGGTTCTTCAAGGCAGAATAATTGCAGAAA...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTTGTGAAGTAGTCCTTTaGATAATCAAATCCATGCTT +
Preference number: 4 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFCEVVL*IIKSML
Trigger: AAGCATGGATTTGATTATGCAAAGGACTACTTCACA...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR GCA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTCTTGGTTGCAACACTTaGAATTCTTCTTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TDDTHIRQAANLNICTESLGCNT*NSSSSS
Trigger: GGAAGAAGAAGAAGAATTGCAAGTGTTGCAACCAAG...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR GCA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTAATAGCTTTGTTTACTaGAGCTACATTCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFNSFVY*SYIPQA
Trigger: AGCCTGAGGAATGTAGCTGCAGTAAACAAAGCTATT...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR GCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAACATCTTCCCCGCTATaGTGGAATTACTTCGGTGTT +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKTSSPL*WNYFGV
Trigger: AACACCGAAGTAATTCCAGCATAGCGGGGAAGATGT...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTTTGTAAATTCCATGTaGATGGGCAGCATTGGTCCT +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCFVNSM*MGSIGP
Trigger: AGGACCAATGCTGCCCATCCACATGGAATTTACAAA...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTTCATATTTGGGCAAGTaGTTTGACTGTTGGATATTC +
Preference number: 4 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTSYLGK*FDCWIF
Trigger: GAATATCCAACAGTCAAATCACTTGCCCAAATATGA...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTATGTCAAACAATATGTaGTCCATACTGTGTGTCGTC +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCMSNNM*SILCVV
Trigger: GACGACACACAGTATGGATCACATATTGTTTGACAT...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTGCAATCTTAAAGGTATaGTGTATGATGAACGCTTTG +
Preference number: 4 (lower is better)
Translates to: TDDTHIRQAANLNICTESAILKV*CMMNAL
Trigger: CAAAGCGTTCATCATACATCATACCTTTAAGATTGC...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR TCA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTGCAATCTTAAAGGTATaGTGTATGATGAACGCTTTG +
Preference number: 4 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTAILKV*CMMNAL
Trigger: CAAAGCGTTCATCATACATCATACCTTTAAGATTGC...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTGCTTCTAGACTTTCCTaGAGCCAGAATTGTTCTATA +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCASRLS*SQNCSI
Trigger: TATAGAACAATTCTGGCTTCAGGAAAGTCTAGAAGC...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CCA 90 bp ATTAGTCCAGTCCACCAGACTAAGTCTGTAGTTTTGTCTGTACTCATAGATGTTAGCAGTTCTCGTTGTTaGTGTAGACATTGTGATTGT +
Preference number: 4 (lower is better)
Translates to: ISPVHQTKSVVLSVLIDVSSSRC*CRHCDC
Trigger: ACAATCACAATGTCTACACCAACAACGAGAACTGCT...AACATCTATGAGTACAGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAATTTGTAAATTCCATGTaGATGGGCAGCATTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKFVNSM*MGSIGP
Trigger: AGGACCAATGCTGCCCATCCACATGGAATTTACAAA...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTCATATTTGGGCAAGTaGTTTGACTGTTGGATATTC +
Preference number: 4 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCSYLGK*FDCWIF
Trigger: GAATATCCAACAGTCAAATCACTTGCCCAAATATGA...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp ATTAGTCCAGTCCACCAGACTAAGTCTGTAGTTTTGTCTGTACTCATAGATGTTTCATATTTGGGCAAGTaGTTTGACTGTTGGATATTC +
Preference number: 4 (lower is better)
Translates to: ISPVHQTKSVVLSVLIDVSYLGK*FDCWIF
Trigger: GAATATCCAACAGTCAAATCACTTGCCCAAATATGA...AACATCTATGAGTACAGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR TCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAATACGGTTGTTCTCCTTaGAAAGTTGCAGTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKYGCSP*KVAVCY
Trigger: ATAGCAAACTGCAACTTTTCAAGGAGAACAACCGTA...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp ATTAGTCCAGTCCACCAGACTAAGTCTGTAGTTTTGTCTGTACTCATAGATGTTGAATGTTGGTGGCTGTaGTTACCTTTATTAGTTTAC +
Preference number: 4 (lower is better)
Translates to: ISPVHQTKSVVLSVLIDVECWWL*LPLLVY
Trigger: GTAAACTAATAAAGGTAATCACAGCCACCAACATTC...AACATCTATGAGTACAGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR TCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAGGCAAGCAGCTAATTTaGACATATGTACAGAGTCTA +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKGKQLI*TYVQSL
Trigger: TAGACTCTGTACATATGTTCAAATTAGCTGCTTGCC...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CCA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAACTCTCTTCAAGAGTATaGGAAGAATTTACTGGTCAC +
Preference number: 4 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKLSSRV*EEFTGH
Trigger: GTGACCAGTAAATTCTTCCCATACTCTTGAAGAGAG...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260128.8
ENST00000402687.9
CDS-3UTR CCA 90 bp ATTAGTCCAGTCCACCAGACTAAGTCTGTAGTTTTGTCTGTACTCATAGATGTTGTTGGATATTCTTGCTaGATTCTTCCTTCTTACGTA +
Preference number: 4 (lower is better)
Translates to: ISPVHQTKSVVLSVLIDVVGYSC*ILPSYV
Trigger: TACGTAAGAAGGAAGAATCCAGCAAGAATATCCAAC...AACATCTATGAGTACAGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS CCA 90 bp CTCATCTGCCCTGACCTCCGAGGAGCGCCGGCAGCCGGGAAGGCCTaGCCTCTGATCCTCGCTGCCCTCGCTCCTGGCCTCTGCGCCTGG +
Preference number: 5 (lower is better)
Translates to: LICPDLRGAPAAGKA*PLILAALAPGLCAW
Trigger: CCAGGCGCAGAGGCCAGGAGCGAGGGCAGCGAGGATCAGAGGCCAGGCCTTCCCGGCTGCCGGCGCTCCTCGGAGGTCAGGGCAGATGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402687.9
ENST00000419716.7
ENST00000529041.5
ENST00000616868.1
CDS GCA 90 bp GGGACTTCCTTCCTCCTCCGAAGGGGGAGAGTCATGTTCCTCATCTaGCCTGACCTCCGAGGAGCGCCGGCAGCCGGGAAGGCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: GTSFLLRRGRVMFLI*PDLRGAPAAGKAWP
Trigger: AGGCCAGGCCTTCCCGGCTGCCGGCGCTCCTCGGAGGTCAGGGCAGATGAGGAACATGACTCTCCCCCTTCGGAGGAGGAAGGAAGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402687.9
ENST00000419716.7
ENST00000529041.5
ENST00000616868.1
CDS GCA 90 bp GTGGGCCCACGGCGTTGCTGCTATCTGCCAGCATCCTGCCCCTGTTaGCACCACTGGAAGCCTGGAGATCTCTTGGCCCCTTGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: VGPRRCCYLPASCPC*HHWKPGDLLAPCGL
Trigger: AAGGCCACAAGGGGCCAAGAGATCTCCAGGCTTCCAGTGGTGGCAACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS GCA 90 bp TGTCACTCGGACAGTGGTAGGTGGGCCCACGGCGTTGCTGCTATCTaGCAGCATCCTGCCCCTGTTGCCACCACTGGAAGCCTGGAGATC +
Preference number: 5 (lower is better)
Translates to: CHSDSGRWAHGVAAI*QHPAPVATTGSLEI
Trigger: GATCTCCAGGCTTCCAGTGGTGGCAACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCACCTACCACTGTCCGAGTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS GCA 90 bp TCCGTGCAAGGCTGGTTCCTCTGTCCCACTCATGTCCTCAGCTTGTaGCGGCACCTACGTGGACAGAGCCCCCTCTCGATTGTCAGTCAC +
Preference number: 5 (lower is better)
Translates to: SVQGWFLCPTHVLSL*RHLRGQSPLSIVSH
Trigger: GTGACTGACAATCGAGAGGGGGCTCTGTCCACGTAGGTGCCGGCACAAGCTGAGGACATGAGTGGGACAGAGGAACCAGCCTTGCACGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525112.1
ENST00000534179.5
CDS-3UTR CAA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTTCTAGGCCTTGCCAGTaGATGTCTGCAGTGAGACGG +
Preference number: 5 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVSRPCQ*MSAVRR
Trigger: CCGTCTCACTGCAGACATCAACTGGCAAGGCCTAGA...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS TCA 90 bp CATGGAAGCCGCGAGCGTAGAGGTTCCGCGTGCTCTGCCGGACTGTaGGCAGGTCACTGGGTCCTTTACACTTGTGAATTCGAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: HGSRERRGSACSAGL*AGHWVLYTCEFEAC
Trigger: GCAAGCTTCGAATTCACAAGTGTAAAGGACCCAGTGACCTGCTCACAGTCCGGCAGAGCACGCGGAACCTCTACGCTCGCGGCTTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS GCA 90 bp GTGAAGCAAGTGAGGCCAGGCAGGCTGCACTCTTCCCCCTTCCTCTaGCGTCTCTTCTCCTTCCTCTCCTTCTTCCTCCTACGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: VKQVRPGRLHSSPFL*RLFSFLSFFLLRLF
Trigger: GAACAACCGTAGGAGGAAGAAGGAGAGGAAGGAGAAGAGACGGCAGAGGAAGGGGGAAGAGTGCAGCCTGCCTGGCCTCACTTGCTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000531512.5
ENST00000616868.1
CDS CCA 90 bp CAAGCACAGAAAGATCCCAGGTTCCAGAACGGGGCTGTCTGCCAGTaGTTGTTGTCATGCGTGAAGCAAGTGAGGCCAGGCAGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: QAQKDPRFQNGAVCQ*LLSCVKQVRPGRLH
Trigger: GTGCAGCCTGCCTGGCCTCACTTGCTTCACGCATGACAACAACCACTGGCAGACAGCCCCGTTCTGGAACCTGGGATCTTTCTGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS-3UTR CAA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATAGCATCCTGCCCCTGTaGCCACCACTGGAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHSILPL*PPLEAW
Trigger: CCAGGCTTCCAGTGGTGGCAACAGGGGCAGGATGCT...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTGGTGGGCCCACGGCGTaGCTGCTATCTGCCAGCATC +
Preference number: 5 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFGGPTA*LLSASI
Trigger: GATGCTGGCAGATAGCAGCAACGCCGTGGGCCCACC...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGGGTGGGCCCACGGCGTaGCTGCTATCTGCCAGCATC +
Preference number: 5 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWGGPTA*LLSASI
Trigger: GATGCTGGCAGATAGCAGCAACGCCGTGGGCCCACC...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS CCA 90 bp GTTCCTCTGTCCCACTCATGTCCTCAGCTTGTGCCGGCACCTACGTaGACAGAGCCCCCTCTCGATTGTCAGTCACCAGGCTTATTGTTG +
Preference number: 5 (lower is better)
Translates to: VPLSHSCPQLVPAPT*TEPPLDCQSPGLLL
Trigger: CAACAATAAGCCTGGTGACTGACAATCGAGAGGGGGCTCTGTCCACGTAGGTGCCGGCACAAGCTGAGGACATGAGTGGGACAGAGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525112.1
ENST00000534179.5
CDS-3UTR CAA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTGGTGGGCCCACGGCGTaGCTGCTATCTGCCAGCATC +
Preference number: 5 (lower is better)
Translates to: FPTLCLGSSSESAEAISIGGPTA*LLSASI
Trigger: GATGCTGGCAGATAGCAGCAACGCCGTGGGCCCACC...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS CCA 90 bp CAGCATCCTGCCCCTGTTGCCACCACTGGAAGCCTGGAGATCTCTTaGCCCCTTGTGGCCTTCATCATGACGCTTAGCAATGTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: QHPAPVATTGSLEIS*PLVAFIMTLSNVSW
Trigger: CCAAGAAACATTGCTAAGCGTCATGATGAAGGCCACAAGGGGCCAAGAGATCTCCAGGCTTCCAGTGGTGGCAACAGGGGCAGGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS-3UTR CAA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTTGCTGGCATAGTTCTTaGACCCGTTCATATTTGGGC +
Preference number: 5 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVCWHSS*TRSYLG
Trigger: GCCCAAATATGAACGGGTCAAAGAACTATGCCAGCA...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATCCACTTCTGCCCCGGTaGTTCACAGGCTGTCTGGTA +
Preference number: 5 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHPLLPR*FTGCLV
Trigger: TACCAGACAGCCTGTGAACAACCGGGGCAGAAGTGG...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS GCA 90 bp TGTCCCCCATCAATCAATCACCAGAAGGAAAAGGTGCTTCCTCCGTaGAAGGCTGGTTCCTCTGTCCCACTCATGTCCTCAGCTTGTGCC +
Preference number: 5 (lower is better)
Translates to: CPPSINHQKEKVLPP*KAGSSVPLMSSACA
Trigger: GGCACAAGCTGAGGACATGAGTGGGACAGAGGAACCAGCCTTGCACGGAGGAAGCACCTTTTCCTTCTGGTGATTGATTGATGGGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525112.1
ENST00000534179.5
CDS CCA 90 bp ATTGGGAAGAATAAAACACTTGTGTGTCACTCGGACAGTGGTAGGTaGGCCCACGGCGTTGCTGCTATCTGCCAGCATCCTGCCCCTGTT +
Preference number: 5 (lower is better)
Translates to: IGKNKTLVCHSDSGR*AHGVAAICQHPAPV
Trigger: AACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCACCTACCACTGTCCGAGTGACACACAAGTGTTTTATTCTTCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS-3UTR CAA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTCTGCACTCTTTGTCTTaGTCATGGAAGCCGCGAGCG +
Preference number: 5 (lower is better)
Translates to: AISIDTACSAETTKNPSLLHSLS*SWKPRA
Trigger: CGCTCGCGGCTTCCATGACAAAGACAAAGAGTGCAG...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTAAGCCTGGAGATCTCTaGGCCCCTTGTGGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: AISIDTACSAETTKNPSLKPGDL*APCGLH
Trigger: ATGAAGGCCACAAGGGGCCAAGAGATCTCCAGGCTT...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTGGAAGAATAAAACACTaGTGTGTCACTCGGACAGTG +
Preference number: 5 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVGRIKH*CVTRTV
Trigger: CACTGTCCGAGTGACACACAAGTGTTTTATTCTTCC...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS CCA 90 bp ATCAATCAATCACCAGAAGGAAAAGGTGCTTCCTCCGTGCAAGGCTaGTTCCTCTGTCCCACTCATGTCCTCAGCTTGTGCCGGCACCTA +
Preference number: 5 (lower is better)
Translates to: INQSPEGKGASSVQG*FLCPTHVLSLCRHL
Trigger: TAGGTGCCGGCACAAGCTGAGGACATGAGTGGGACAGAGGAACCAGCCTTGCACGGAGGAAGCACCTTTTCCTTCTGGTGATTGATTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525112.1
ENST00000534179.5
CDS-3UTR CAA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTCCCCAGCTCCACATCTaGATCATCGGTAAGCACAAG +
Preference number: 5 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAPQLHI*IIGKHK
Trigger: CTTGTGCTTACCGATGATCAAGATGTGGAGCTGGGG...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTCCGTTGACTCTTTCTTaGGCTTCTGCTGGCACGGTA +
Preference number: 5 (lower is better)
Translates to: AISIDTACSAETTKNPSLPLTLS*ASAGTV
Trigger: TACCGTGCCAGCAGAAGCCAAAGAAAGAGTCAACGG...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATTGGACAAATCTGGGCTaGTACTTTGGAGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHWTNLG*YFGVPW
Trigger: CCAGGGGACTCCAAAGTACAAGCCCAGATTTGTCCA...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTCTACGGTTGTTCTCCTaGAAAAGTTGCAGTTTGCTA +
Preference number: 5 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVLRLFS*KSCSLL
Trigger: TAGCAAACTGCAACTTTTCAAGGAGAACAACCGTAG...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTCAGAGGCCATCTCCATaGACACAGCGTGCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: FPTLCLGSSSESAEAISIQRPSP*TQRAQQ
Trigger: CTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCTG...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTCCGTGTGCACACCGCTaGCTCACATGCTCACTAGCT +
Preference number: 5 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCPCAHR*LTCSLA
Trigger: AGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGG...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTCCGTGTGCACACCGCTaGCTCACATGCTCACTAGCT +
Preference number: 5 (lower is better)
Translates to: FPTLCLGSSSESAEAISIPCAHR*LTCSLA
Trigger: AGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGG...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS GCA 90 bp TCTTTCTTTGGCTTCTGCTGGCACGGTAACCAGACTCCCTACAACTaGACTCTTTGTCTTTGTCATGGAAGCCGCGAGCGTAGAGGTTCC +
Preference number: 5 (lower is better)
Translates to: SFFGFCWHGNQTPYN*TLCLCHGSRERRGS
Trigger: GGAACCTCTACGCTCGCGGCTTCCATGACAAAGACAAAGAGTGCAGTTGTAGGGAGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CCA 90 bp TCCTCAATGCATTGCCACTTCTGCCCCGGTTGTTCACAGGCTGTCTaGTACCTGGCCTGCTGGCATAGTTCTTTGACCCGTTCATATTTG +
Preference number: 5 (lower is better)
Translates to: SSMHCHFCPGCSQAV*YLACWHSSLTRSYL
Trigger: CAAATATGAACGGGTCAAAGAACTATGCCAGCAGGCCAGGTACCAGACAGCCTGTGAACAACCGGGGCAGAAGTGGCAATGCATTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS-3UTR CAA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATCGTTTTGTTCATGACTaGCAGGGACCCCAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDRFVHD*QGPQLH
Trigger: GTGGAGCTGGGGTCCCTGCAAGTCATGAACAAAACG...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTCGTTTTGTTCATGACTaGCAGGGACCCCAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: FPTLCLGSSSESAEAISIRFVHD*QGPQLH
Trigger: GTGGAGCTGGGGTCCCTGCAAGTCATGAACAAAACG...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTTCTGGGTCCAGAAGTTaGAGGACAGACTTGCCGTCC +
Preference number: 5 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCSGSRS*RTDLPS
Trigger: GGACGGCAAGTCTGTCCTCAAACTTCTGGACCCAGA...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGTGTATCCTCAATGCATaGCCACTTCTGCCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWCILNA*PLLPRL
Trigger: CAACCGGGGCAGAAGTGGCAATGCATTGAGGATACA...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTCTGCACTCTTTGTCTTaGTCATGGAAGCCGCGAGCG +
Preference number: 5 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCLHSLS*SWKPRA
Trigger: CGCTCGCGGCTTCCATGACAAAGACAAAGAGTGCAG...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTTGGACAAATCTGGGCTaGTACTTTGGAGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFWTNLG*YFGVPW
Trigger: CCAGGGGACTCCAAAGTACAAGCCCAGATTTGTCCA...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATAAGCCTGGAGATCTCTaGGCCCCTTGTGGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDKPGDL*APCGLH
Trigger: ATGAAGGCCACAAGGGGCCAAGAGATCTCCAGGCTT...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGCATCCTGCCCCTGTaGCCACCACTGGAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFSILPL*PPLEAW
Trigger: CCAGGCTTCCAGTGGTGGCAACAGGGGCAGGATGCT...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTCCACGCTCTGGCCGATaGGTACAGTTCTCTCTCACA +
Preference number: 5 (lower is better)
Translates to: FPTLCLGSSSESAEAISIPRSGR*VQFSLT
Trigger: TGTGAGAGAGAACTGTACCAATCGGCCAGAGCGTGG...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CTGGGGCTGGGCCCGAGCTCTAGCTCTGTCATGCCATCGCCACTGAAATCGGTTGTTCTCCTTGAAAAGTaGCAGTTTGCTATCTACTTC +
Preference number: 5 (lower is better)
Translates to: LGLGPSSSSVMPSPLKSVVLLEK*QFAIYF
Trigger: GAAGTAGATAGCAAACTGCAACTTTTCAAGGAGAAC...AACCGATTTCAGTGGCGATGGCATGACAGAGCTAGAGCTCGGGCCCAGCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTTCTAGGCCTTGCCAGTaGATGTCTGCAGTGAGACGG +
Preference number: 5 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCSRPCQ*MSAVRR
Trigger: CCGTCTCACTGCAGACATCAACTGGCAAGGCCTAGA...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTCAGAGGCCATCTCCATaGACACAGCGTGCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCQRPSP*TQRAQQ
Trigger: CTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCTG...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS TCA 90 bp GTGCTCTGCCGGACTGTGAGCAGGTCACTGGGTCCTTTACACTTGTaGATTCGAAGCTTGCCAGATGTATCCTCAATGCATTGCCACTTC +
Preference number: 5 (lower is better)
Translates to: VLCRTVSRSLGPLHL*IRSLPDVSSMHCHF
Trigger: GAAGTGGCAATGCATTGAGGATACATCTGGCAAGCTTCGAATTCACAAGTGTAAAGGACCCAGTGACCTGCTCACAGTCCGGCAGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS-3UTR CAA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTAGTTTGAGGACAGACTaGCCGTCCACATCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: FPTLCLGSSSESAEAISISLRTD*PSTSGG
Trigger: ACCTCCTGATGTGGACGGCAAGTCTGTCCTCAAACT...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATAGTTTGAGGACAGACTaGCCGTCCACATCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDSLRTD*PSTSGG
Trigger: ACCTCCTGATGTGGACGGCAAGTCTGTCCTCAAACT...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGAGTTTGAGGACAGACTaGCCGTCCACATCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRSLRTD*PSTSGG
Trigger: ACCTCCTGATGTGGACGGCAAGTCTGTCCTCAAACT...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTCTACAACTGCACTCTTaGTCTTTGTCATGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVALQLHS*SLSWKP
Trigger: CGGCTTCCATGACAAAGACAAAGAGTGCAGTTGTAG...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGCCGTTGACTCTTTCTTaGGCTTCTGCTGGCACGGTA +
Preference number: 5 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRPLTLS*ASAGTV
Trigger: TACCGTGCCAGCAGAAGCCAAAGAAAGAGTCAACGG...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTTGGACAAATCTGGGCTaGTACTTTGGAGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCWTNLG*YFGVPW
Trigger: CCAGGGGACTCCAAAGTACAAGCCCAGATTTGTCCA...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATGGTGGGCCCACGGCGTaGCTGCTATCTGCCAGCATC +
Preference number: 5 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYGGPTA*LLSASI
Trigger: GATGCTGGCAGATAGCAGCAACGCCGTGGGCCCACC...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTTCCCAACCTTATGCCTaGGGTCTTCATCTGAGTCAG +
Preference number: 5 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFSQPYA*GLHLSQ
Trigger: CTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGA...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTGTTCAAATGCAGGGTTaGAAGGTCAGCTGGCAAGGT +
Preference number: 5 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFVQMQG*KVSWQG
Trigger: ACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAAC...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp GAGTCTCCGTGTGCACACCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAATCTCTGGACTTAATGTaGGTCGGTTCAAATGCAGGG +
Preference number: 5 (lower is better)
Translates to: ESPCAHRLLTCSLASTAQSLDLM*VGSNAG
Trigger: CCCTGCATTTGAACCGACCAACATTAAGTCCAGAGA...TTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGGAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTCCGTGTGCACACCGCTaGCTCACATGCTCACTAGCT +
Preference number: 5 (lower is better)
Translates to: FVILLHLGQHLPRYAGITPCAHR*LTCSLA
Trigger: AGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGG...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCCCGTGTGCACACCGCTaGCTCACATGCTCACTAGCT +
Preference number: 5 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCPCAHR*LTCSLA
Trigger: AGCTAGTGAGCATGTGAGCAAGCGGTGTGCACACGG...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTCGATCTGTGGGACTATaGATCCTGGTTCTACACTTG +
Preference number: 5 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFRSVGL*ILVLHL
Trigger: CAAGTGTAGAACCAGGATCAATAGTCCCACAGATCG...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTCCACTTCTGCCCCGGTaGTTCACAGGCTGTCTGGTA +
Preference number: 5 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFPLLPR*FTGCLV
Trigger: TACCAGACAGCCTGTGAACAACCGGGGCAGAAGTGG...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGATCTGGGCTTGTACTTaGGAGTCCCCTGGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRIWACT*ESPGFS
Trigger: TGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGAT...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTAGCATCCTGCCCCTGTaGCCACCACTGGAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: TDDTHIRQAANLNICTESSILPL*PPLEAW
Trigger: CCAGGCTTCCAGTGGTGGCAACAGGGGCAGGATGCT...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CAA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTGGAAGAATAAAACACTaGTGTGTCACTCGGACAGTG +
Preference number: 5 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAGRIKH*CVTRTV
Trigger: CACTGTCCGAGTGACACACAAGTGTTTTATTCTTCC...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTTCTAGGCCTTGCCAGTaGATGTCTGCAGTGAGACGG +
Preference number: 5 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFSRPCQ*MSAVRR
Trigger: CCGTCTCACTGCAGACATCAACTGGCAAGGCCTAGA...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCAGAGGCCATCTCCATaGACACAGCGTGCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLQRPSP*TQRAQQ
Trigger: CTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCTG...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTCAGAGGCCATCTCCATaGACACAGCGTGCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: GGLFDFVTMTANSETDKPQRPSP*TQRAQQ
Trigger: CTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCTG...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTTCCCAACCTTATGCCTaGGGTCTTCATCTGAGTCAG +
Preference number: 5 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCSQPYA*GLHLSQ
Trigger: CTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGA...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATTACTGTGTGTCGTCCTaGGGGGTTTATTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHYCVSS*GVYLTL
Trigger: CAAAGTCAAATAAACCCCCAAGGACGACACACAGTA...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTACTGTGTGTCGTCCTaGGGGGTTTATTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAYCVSS*GVYLTL
Trigger: CAAAGTCAAATAAACCCCCAAGGACGACACACAGTA...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS TCA 90 bp CCACTGGAAGCCTGGAGATCTCTTGGCCCCTTGTGGCCTTCATCATaGCGCTTAGCAATGTTTCTTGGTTGCAACACTTGCAATTCTTCT +
Preference number: 5 (lower is better)
Translates to: PLEAWRSLGPLWPSS*RLAMFLGCNTCNSS
Trigger: AGAAGAATTGCAAGTGTTGCAACCAAGAAACATTGCTAAGCGTCATGATGAAGGCCACAAGGGGCCAAGAGATCTCCAGGCTTCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS GCA 90 bp TCCCCTGGTTTCTCAAGAATTGCCGTTGACTCTTTCTTTGGCTTCTaGTGGCACGGTAACCAGACTCCCTACAACTGCACTCTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: SPGFSRIAVDSFFGF*WHGNQTPYNCTLCL
Trigger: AAGACAAAGAGTGCAGTTGTAGGGAGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGAGAAACCAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS-3UTR CAA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTCGTTTTGTTCATGACTaGCAGGGACCCCAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: GGLFDFVTMTANSETDKPRFVHD*QGPQLH
Trigger: GTGGAGCTGGGGTCCCTGCAAGTCATGAACAAAACG...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATATGTGTTGGGAAGCATaGGGGTACAGTTTAGAAAAC +
Preference number: 5 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHMCWEA*GYSLEN
Trigger: GTTTTCTAAACTGTACCCCAATGCTTCCCAACACAT...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATACTAGGAGTTATGTGTaGGGAAGCATTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDTRSYV*GSIGVQ
Trigger: CTGTACCCCAATGCTTCCCAACACATAACTCCTAGT...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TGTTGGTCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGACTAGGAGTTATGTGTaGGGAAGCATTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: CWSVQMQGLKVSWQGQMRTRSYV*GSIGVQ
Trigger: CTGTACCCCAATGCTTCCCAACACATAACTCCTAGT...CCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTAAAGTCTGGAGCCTTTaGCGCTGTAGAATGTTTGTA +
Preference number: 5 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVAKVWSL*RCRMFV
Trigger: TACAAACATTCTACAGCGCAAAAGGCTCCAGACTTT...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCATCTGGGTCCAGAAGTTaGAGGACAGACTTGCCGTCC +
Preference number: 5 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSSGSRS*RTDLPS
Trigger: GGACGGCAAGTCTGTCCTCAAACTTCTGGACCCAGA...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTGTATCACGCCAAATTTaGGCCTTCTTGTTTGTTCGA +
Preference number: 5 (lower is better)
Translates to: AISIDTACSAETTKNPSLVSRQI*AFLFVR
Trigger: TCGAACAAACAAGAAGGCCAAAATTTGGCGTGATAC...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATTGCTGGCATAGTTCTTaGACCCGTTCATATTTGGGC +
Preference number: 5 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDCWHSS*TRSYLG
Trigger: GCCCAAATATGAACGGGTCAAAGAACTATGCCAGCA...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTCTGCACTCTTTGTCTTaGTCATGGAAGCCGCGAGCG +
Preference number: 5 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFLHSLS*SWKPRA
Trigger: CGCTCGCGGCTTCCATGACAAAGACAAAGAGTGCAG...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCCCGTTGACTCTTTCTTaGGCTTCTGCTGGCACGGTA +
Preference number: 5 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCPLTLS*ASAGTV
Trigger: TACCGTGCCAGCAGAAGCCAAAGAAAGAGTCAACGG...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTCTGGTTTCTCAAGAATaGCCGTTGACTCTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVALVSQE*PLTLSL
Trigger: CAAAGAAAGAGTCAACGGCAATTCTTGAGAAACCAG...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GCCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTCTACGGTTGTTCTCCTaGAAAAGTTGCAGTTTGCTA +
Preference number: 5 (lower is better)
Translates to: AISIDTACSAETTKNPSLLRLFS*KSCSLL
Trigger: TAGCAAACTGCAACTTTTCAAGGAGAACAACCGTAG...AAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGTTCTTCCTCCTACGGTaGTTCTCCTTGAAAAGTTGC +
Preference number: 5 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWFFLLR*FSLKSC
Trigger: GCAACTTTTCAAGGAGAACAACCGTAGGAGGAAGAA...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATTCTCTGGACTTAATGTaGGTCGGTTCAAATGCAGGG +
Preference number: 5 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDSLDLM*VGSNAG
Trigger: CCCTGCATTTGAACCGACCAACATTAAGTCCAGAGA...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATTGTATGATGAACGCTTaGAGGCTAGGCACAGAGAGA +
Preference number: 5 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDCMMNA*RLGTER
Trigger: TCTCTCTGTGCCTAGCCTCAAAGCGTTCATCATACA...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS CCA 90 bp CCTGGTTTCTCAAGAATTGCCGTTGACTCTTTCTTTGGCTTCTGCTaGCACGGTAACCAGACTCCCTACAACTGCACTCTTTGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: PGFSRIAVDSFFGFC*HGNQTPYNCTLCLC
Trigger: ACAAAGACAAAGAGTGCAGTTGTAGGGAGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGAGAAACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CCA 90 bp ATTTCACCTTCAAATTCGACGGACAAGGAACGTGTCTGCCGAGTATaGACAAATCTGGGCTTGTACTTTGGAGTCCCCTGGTTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: ISPSNSTDKERVCRV*TNLGLYFGVPWFLK
Trigger: CTTGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGATTTGTCCATACTCGGCAGACACGTTCCTTGTCCGTCGAATTTGAAGGTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS-3UTR CAA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGCGTTTTGTTCATGACTaGCAGGGACCCCAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERRFVHD*QGPQLH
Trigger: GTGGAGCTGGGGTCCCTGCAAGTCATGAACAAAACG...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTACTAGGAGTTATGTGTaGGGAAGCATTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPTRSYV*GSIGVQ
Trigger: CTGTACCCCAATGCTTCCCAACACATAACTCCTAGT...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTAAAGTCTGGAGCCTTTaGCGCTGTAGAATGTTTGTA +
Preference number: 5 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFKVWSL*RCRMFV
Trigger: TACAAACATTCTACAGCGCAAAAGGCTCCAGACTTT...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTCGATCTGTGGGACTATaGATCCTGGTTCTACACTTG +
Preference number: 5 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPRSVGL*ILVLHL
Trigger: CAAGTGTAGAACCAGGATCAATAGTCCCACAGATCG...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGTTTGAGGACAGACTaGCCGTCCACATCAGGAGGT +
Preference number: 5 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFSLRTD*PSTSGG
Trigger: ACCTCCTGATGTGGACGGCAAGTCTGTCCTCAAACT...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CCGCTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTGACTGTTGGATATTCTaGCTGGATTCTTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: PLAHMLTSFYCTKVPRVADCWIF*LDSSFL
Trigger: TAAGAAGGAAGAATCCAGCAAGAATATCCAACAGTC...AGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTCTGGTTTCTCAAGAATaGCCGTTGACTCTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFLVSQE*PLTLSL
Trigger: CAAAGAAAGAGTCAACGGCAATTCTTGAGAAACCAG...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTATCTGGGCTTGTACTTaGGAGTCCCCTGGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFIWACT*ESPGFS
Trigger: TGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGAT...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTTGGACAAATCTGGGCTaGTACTTTGGAGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: GGLFDFVTMTANSETDKPWTNLG*YFGVPW
Trigger: CCAGGGGACTCCAAAGTACAAGCCCAGATTTGTCCA...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTCAGAGGCCATCTCCATaGACACAGCGTGCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: TDDTHIRQAANLNICTESQRPSP*TQRAQQ
Trigger: CTGCTGAGCACGCTGTGTCAATGGAGATGGCCTCTG...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CAA 90 bp CTTCCCCGCTATGCTGGAATTACTTCGGTGTTCTGCGGTGGCCATGGTGAACATAGGCAAGCAGCTAATTaGAACATATGTACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: LPRYAGITSVFCGGHGEHRQAAN*NICTES
Trigger: AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCT...ATGTTCACCATGGCCACCGCAGAACACCGAAGTAATTCCAGCATAGCGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS GCA 90 bp ATGTCATATATTTCACCTTCAAATTCGACGGACAAGGAACGTGTCTaGCGAGTATGGACAAATCTGGGCTTGTACTTTGGAGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: MSYISPSNSTDKERV*RVWTNLGLYFGVPW
Trigger: CCAGGGGACTCCAAAGTACAAGCCCAGATTTGTCCATACTCGGCAGACACGTTCCTTGTCCGTCGAATTTGAAGGTGAAATATATGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS-3UTR CAA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTATGTGTTGGGAAGCATaGGGGTACAGTTTAGAAAAC +
Preference number: 5 (lower is better)
Translates to: FPTLCLGSSSESAEAISIMCWEA*GYSLEN
Trigger: GTTTTCTAAACTGTACCCCAATGCTTCCCAACACAT...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTACTAGGAGTTATGTGTaGGGAAGCATTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: FVILLHLGQHLPRYAGITTRSYV*GSIGVQ
Trigger: CTGTACCCCAATGCTTCCCAACACATAACTCCTAGT...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTAAAGTCTGGAGCCTTTaGCGCTGTAGAATGTTTGTA +
Preference number: 5 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCKVWSL*RCRMFV
Trigger: TACAAACATTCTACAGCGCAAAAGGCTCCAGACTTT...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCGATCTGTGGGACTATaGATCCTGGTTCTACACTTG +
Preference number: 5 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFRSVGL*ILVLHL
Trigger: CAAGTGTAGAACCAGGATCAATAGTCCCACAGATCG...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTTCTGGGTCCAGAAGTTaGAGGACAGACTTGCCGTCC +
Preference number: 5 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTSGSRS*RTDLPS
Trigger: GGACGGCAAGTCTGTCCTCAAACTTCTGGACCCAGA...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTGTATCACGCCAAATTTaGGCCTTCTTGTTTGTTCGA +
Preference number: 5 (lower is better)
Translates to: FPTLCLGSSSESAEAISIVSRQI*AFLFVR
Trigger: TCGAACAAACAAGAAGGCCAAAATTTGGCGTGATAC...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGGACTGTTGGATATTCTaGCTGGATTCTTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWDCWIF*LDSSFL
Trigger: TAAGAAGGAAGAATCCAGCAAGAATATCCAACAGTC...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTATTTGGGCAAGTGATTaGACTGTTGGATATTCTTGC +
Preference number: 5 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFIWASD*TVGYSC
Trigger: GCAAGAATATCCAACAGTCAAATCACTTGCCCAAAT...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTGCTGGCATAGTTCTTaGACCCGTTCATATTTGGGC +
Preference number: 5 (lower is better)
Translates to: FVILLHLGQHLPRYAGITCWHSS*TRSYLG
Trigger: GCCCAAATATGAACGGGTCAAAGAACTATGCCAGCA...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTCTACAACTGCACTCTTaGTCTTTGTCATGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: FVILLHLGQHLPRYAGITLQLHS*SLSWKP
Trigger: CGGCTTCCATGACAAAGACAAAGAGTGCAGTTGTAG...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAATCTGGGCTTGTACTTaGGAGTCCCCTGGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSIWACT*ESPGFS
Trigger: TGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGAT...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTAAGCCTGGAGATCTCTaGGCCCCTTGTGGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: TDDTHIRQAANLNICTESKPGDL*APCGLH
Trigger: ATGAAGGCCACAAGGGGCCAAGAGATCTCCAGGCTT...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CAA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATAAGCCTGGAGATCTCTaGGCCCCTTGTGGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYKPGDL*APCGLH
Trigger: ATGAAGGCCACAAGGGGCCAAGAGATCTCCAGGCTT...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTCCACGCTCTGGCCGATaGGTACAGTTCTCTCTCACA +
Preference number: 5 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVPRSGR*VQFSLT
Trigger: TGTGAGAGAGAACTGTACCAATCGGCCAGAGCGTGG...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTCCACGCTCTGGCCGATaGGTACAGTTCTCTCTCACA +
Preference number: 5 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFPRSGR*VQFSLT
Trigger: TGTGAGAGAGAACTGTACCAATCGGCCAGAGCGTGG...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTCCACGCTCTGGCCGATaGGTACAGTTCTCTCTCACA +
Preference number: 5 (lower is better)
Translates to: TDDTHIRQAANLNICTESPRSGR*VQFSLT
Trigger: TGTGAGAGAGAACTGTACCAATCGGCCAGAGCGTGG...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CAA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTAGAGCTTCAATCTCTTaGTCAATGTATGCCTTATGG +
Preference number: 5 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFRASIS*SMYALW
Trigger: CCATAAGGCATACATTGACAAAGAGATTGAAGCTCT...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTTTCTTCCTCCTACGGTaGTTCTCCTTGAAAAGTTGC +
Preference number: 5 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPFFLLR*FSLKSC
Trigger: GCAACTTTTCAAGGAGAACAACCGTAGGAGGAAGAA...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAATCTAGGCCTTGCCAGTaGATGTCTGCAGTGAGACGG +
Preference number: 5 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSESRPCQ*MSAVRR
Trigger: CCGTCTCACTGCAGACATCAACTGGCAAGGCCTAGA...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATCAAGAACCCGTCACTTaGAGCAGTTTGAGTCTTATT +
Preference number: 5 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDQEPVT*SSLSLI
Trigger: AATAAGACTCAAACTGCTCAAAGTGACGGGTTCTTG...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGTTCAAATGCAGGGTTaGAAGGTCAGCTGGCAAGGT +
Preference number: 5 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSVQMQG*KVSWQG
Trigger: ACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAAC...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp CCATCTCCATTGACACAGCGTGCTCAGCAGAGACAACCAAGAACCCGTCACTTTAGGCAAGCAGCTAATTaGAACATATGTACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: PSPLTQRAQQRQPRTRHFRQAAN*NICTES
Trigger: AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCT...AAAGTGACGGGTTCTTGGTTGTCTCTGCTGAGCACGCTGTGTCAATGGAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS GCA 90 bp CTCAACCTCCATTATTTTTCGCTTCTCTGGAAGGGATATCCCGTGTaGTCAAACACTTTCACAGCTGGTAGAATGCTGATGGGAACTTCA +
Preference number: 5 (lower is better)
Translates to: LNLHYFSLLWKGYPV*SNTFTAGRMLMGTS
Trigger: TGAAGTTCCCATCAGCATTCTACCAGCTGTGAAAGTGTTTGAGCACACGGGATATCCCTTCCAGAGAAGCGAAAAATAATGGAGGTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528286.1
CDS-3UTR CAA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTAATCCATGCTTTTCTTaGATGCCATTGCGACAAACA +
Preference number: 5 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCNPCFS*MPLRQT
Trigger: TGTTTGTCGCAATGGCATCAAAGAAAAGCATGGATT...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTCTGGGTCCAGAAGTTaGAGGACAGACTTGCCGTCC +
Preference number: 5 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCSGSRS*RTDLPS
Trigger: GGACGGCAAGTCTGTCCTCAAACTTCTGGACCCAGA...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTTTTTGGCCTTCTTGTTaGTTCGAAACCTGTTACCTG +
Preference number: 5 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPFWPSC*FETCYL
Trigger: CAGGTAACAGGTTTCGAACAAACAAGAAGGCCAAAA...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTGTATCACGCCAAATTTaGGCCTTCTTGTTTGTTCGA +
Preference number: 5 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPVSRQI*AFLFVR
Trigger: TCGAACAAACAAGAAGGCCAAAATTTGGCGTGATAC...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCCATTCAAGTTTACTCTCTGGACTTAATGTTGGTCGGTTCAAATGCAGGGTTTGTATCCTCAATGCATaGCCACTTCTGCCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: FHSSLLSGLNVGRFKCRVCILNA*PLLPRL
Trigger: CAACCGGGGCAGAAGTGGCAATGCATTGAGGATACA...AACCCTGCATTTGAACCGACCAACATTAAGTCCAGAGAGTAAACTTGAATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTTGTATCCTCAATGCATaGCCACTTCTGCCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFCILNA*PLLPRL
Trigger: CAACCGGGGCAGAAGTGGCAATGCATTGAGGATACA...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATTGTATCCTCAATGCATaGCCACTTCTGCCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYCILNA*PLLPRL
Trigger: CAACCGGGGCAGAAGTGGCAATGCATTGAGGATACA...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCACTACAACTGCACTCTTaGTCTTTGTCATGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSLQLHS*SLSWKP
Trigger: CGGCTTCCATGACAAAGACAAAGAGTGCAGTTGTAG...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGATCTGGGCTTGTACTTaGGAGTCCCCTGGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERIWACT*ESPGFS
Trigger: TGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGAT...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTTCTTGGTTGCAACACTaGCAATTCTTCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCSWLQH*QFFFFF
Trigger: GAAGAAGAAGAAGAATTGCAAGTGTTGCAACCAAGA...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCGGAAGAATAAAACACTaGTGTGTCACTCGGACAGTG +
Preference number: 5 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCGRIKH*CVTRTV
Trigger: CACTGTCCGAGTGACACACAAGTGTTTTATTCTTCC...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTGTTCTCCTTGAAAAGTaGCAGTTTGCTATCTACTTC +
Preference number: 5 (lower is better)
Translates to: FPTLCLGSSSESAEAISIVLLEK*QFAIYF
Trigger: GAAGTAGATAGCAAACTGCAACTTTTCAAGGAGAAC...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp AATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTCCCAACCTCTACGGTTGTTCTCCTaGAAAAGTTGCAGTTTGCTA +
Preference number: 5 (lower is better)
Translates to: NAGFEGQLARSNEVFSQPLRLFS*KSCSLL
Trigger: TAGCAAACTGCAACTTTTCAAGGAGAACAACCGTAG...AGGTTGGGAAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTCTAGGCCTTGCCAGTaGATGTCTGCAGTGAGACGG +
Preference number: 5 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCSRPCQ*MSAVRR
Trigger: CCGTCTCACTGCAGACATCAACTGGCAAGGCCTAGA...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGTCTCTGGACTTAATGTaGGTCGGTTCAAATGCAGGG +
Preference number: 5 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLSLDLM*VGSNAG
Trigger: CCCTGCATTTGAACCGACCAACATTAAGTCCAGAGA...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCATGTATGATGAACGCTTaGAGGCTAGGCACAGAGAGA +
Preference number: 5 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSCMMNA*RLGTER
Trigger: TCTCTCTGTGCCTAGCCTCAAAGCGTTCATCATACA...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CAA 90 bp CTTGCTCACATGCTCACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGTTCTCTTGTGGTATGTaGAAATTGTGGAGCATTCAT +
Preference number: 5 (lower is better)
Translates to: LAHMLTSFYCTKVPRVAWFSCGM*KLWSIH
Trigger: ATGAATGCTCCACAATTTCAACATACCACAAGAGAA...CCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGTGAGCATGTGAGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS TCA 90 bp CTGGCCTGCTGGCATAGTTCTTTGACCCGTTCATATTTGGGCAAGTaGTTTGACTGTTGGATATTCTTGCTGGATTCTTCCTTCTTACGT +
Preference number: 5 (lower is better)
Translates to: LACWHSSLTRSYLGK*FDCWIFLLDSSFLR
Trigger: ACGTAAGAAGGAAGAATCCAGCAAGAATATCCAACAGTCAAATCACTTGCCCAAATATGAACGGGTCAAAGAACTATGCCAGCAGGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CCA 90 bp TCTTTGTCAATGTATGCCTTATGGTCCTTCCACGCTCTGGCCGATTaGTACAGTTCTCTCTCACAATGGATAGAGTCATTGGGAAGAATA +
Preference number: 5 (lower is better)
Translates to: SLSMYALWSFHALAD*YSSLSQWIESLGRI
Trigger: TATTCTTCCCAATGACTCTATCCATTGTGAGAGAGAACTGTACCAATCGGCCAGAGCGTGGAAGGACCATAAGGCATACATTGACAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000524731.1
ENST00000616868.1
CDS-3UTR CAA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCATGTGTTGGGAAGCATaGGGGTACAGTTTAGAAAAC +
Preference number: 5 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCMCWEA*GYSLEN
Trigger: GTTTTCTAAACTGTACCCCAATGCTTCCCAACACAT...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTTTTTGGCCTTCTTGTTaGTTCGAAACCTGTTACCTG +
Preference number: 5 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFFWPSC*FETCYL
Trigger: CAGGTAACAGGTTTCGAACAAACAAGAAGGCCAAAA...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
44% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCCCAACCTTATGCCTTGGGTCTTCATCTGAGTCAGCAGAGGCCATCTCCATTCAAATTTTGGCCTTCTaGTTTGTTCGAAACCTGTTA +
Preference number: 5 (lower is better)
Translates to: FPTLCLGSSSESAEAISIQILAF*FVRNLL
Trigger: TAACAGGTTTCGAACAAACAAGAAGGCCAAAATTTG...AATGGAGATGGCCTCTGCTGACTCAGATGAAGACCCAAGGCATAAGGTTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp ACTAGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTCAAATTTTGGCCTTCTaGTTTGTTCGAAACCTGTTA +
Preference number: 5 (lower is better)
Translates to: TSFYCTKVPRVAWNVGGCQILAF*FVRNLL
Trigger: TAACAGGTTTCGAACAAACAAGAAGGCCAAAATTTG...ACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AGCTTCTACTGCACAAAGGTACCCAGGGTAGCTTGGAATGTTGGTGGCTGTGATTTCTTACGTAGAAATTaGCCTCTTTCCACTAGGAAT +
Preference number: 5 (lower is better)
Translates to: SFYCTKVPRVAWNVGGCDFLRRN*PLSTRN
Trigger: ATTCCTAGTGGAAAGAGGCAAATTTCTACGTAAGAA...ATCACAGCCACCAACATTCCAAGCTACCCTGGGTACCTTTGTGCAGTAGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp ATTAGTCCAGTCCACCAGACTAAGTCTGTAGTTTTGTCTGTACTCATAGATGTTCCGTTGACTCTTTCTTaGGCTTCTGCTGGCACGGTA +
Preference number: 5 (lower is better)
Translates to: ISPVHQTKSVVLSVLIDVPLTLS*ASAGTV
Trigger: TACCGTGCCAGCAGAAGCCAAAGAAAGAGTCAACGG...AACATCTATGAGTACAGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTCTGGTTTCTCAAGAATaGCCGTTGACTCTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: FVILLHLGQHLPRYAGITLVSQE*PLTLSL
Trigger: CAAAGAAAGAGTCAACGGCAATTCTTGAGAAACCAG...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTTCGGTGTGTTCTCCTTGAAAAGTaGCAGTTTGCTATCTACTTC +
Preference number: 5 (lower is better)
Translates to: FFSTLVNIFPAMLELLRCVLLEK*QFAIYF
Trigger: GAAGTAGATAGCAAACTGCAACTTTTCAAGGAGAAC...ACACCGAAGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTTTCTTCCTCCTACGGTaGTTCTCCTTGAAAAGTTGC +
Preference number: 5 (lower is better)
Translates to: GGLFDFVTMTANSETDKPFFLLR*FSLKSC
Trigger: GCAACTTTTCAAGGAGAACAACCGTAGGAGGAAGAA...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATGTTCAAATGCAGGGTTaGAAGGTCAGCTGGCAAGGT +
Preference number: 5 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYVQMQG*KVSWQG
Trigger: ACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAAC...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGTGTATGATGAACGCTTaGAGGCTAGGCACAGAGAGA +
Preference number: 5 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERCMMNA*RLGTER
Trigger: TCTCTCTGTGCCTAGCCTCAAAGCGTTCATCATACA...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS GCA 90 bp AACATAGTGGAGAATGCTGTTAGAACAAGCATGCACCCCCAGCTTTaGTCTGTGCAACACGGTAAGAAACAGAAATTAGTTGAAACCACT +
Preference number: 5 (lower is better)
Translates to: NIVENAVRTSMHPQL*SVQHGKKQKLVETT
Trigger: AGTGGTTTCAACTAATTTCTGTTTCTTACCGTGTTGCACAGAGCAAAGCTGGGGGTGCATGCTTGTTCTAACAGCATTCTCCACTATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526654.1
CDS-3UTR CAA 90 bp AAGCTTAATGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTCGATCTGTGGGACTATaGATCCTGGTTCTACACTTG +
Preference number: 5 (lower is better)
Translates to: KLNVKQYVIHTVCRPWGFRSVGL*ILVLHL
Trigger: CAAGTGTAGAACCAGGATCAATAGTCCCACAGATCG...AAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACATTAAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTATTTGGGCAAGTGATTaGACTGTTGGATATTCTTGC +
Preference number: 5 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFIWASD*TVGYSC
Trigger: GCAAGAATATCCAACAGTCAAATCACTTGCCCAAAT...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGGTTCTTCCTCCTACGGTaGTTCTCCTTGAAAAGTTGC +
Preference number: 5 (lower is better)
Translates to: GSVLKDLPGVSSFRHSERFFLLR*FSLKSC
Trigger: GCAACTTTTCAAGGAGAACAACCGTAGGAGGAAGAA...CCTTTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTCAAGAACCCGTCACTTaGAGCAGTTTGAGTCTTATT +
Preference number: 5 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFQEPVT*SSLSLI
Trigger: AATAAGACTCAAACTGCTCAAAGTGACGGGTTCTTG...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTGTTCAAATGCAGGGTTaGAAGGTCAGCTGGCAAGGT +
Preference number: 5 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCVQMQG*KVSWQG
Trigger: ACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAAC...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATTCTCTGGACTTAATGTaGGTCGGTTCAAATGCAGGG +
Preference number: 5 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYSLDLM*VGSNAG
Trigger: CCCTGCATTTGAACCGACCAACATTAAGTCCAGAGA...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp TCGGTTCAAATGCAGGGTTTGAAGGTCAGCTGGCAAGGTCAAATGAGGTGTTTTAGGCAAGCAGCTAATTaGAACATATGTACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: SVQMQGLKVSWQGQMRCFRQAAN*NICTES
Trigger: AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCT...AAAACACCTCATTTGACCTTGCCAGCTGACCTTCAAACCCTGCATTTGAACCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS TCA 90 bp GTAGCTGATTCAAAATGCCTCGTTCTACCGTGTGCACTGTATTTGTaGGCTGTGAATGCAGACAGGACAATCTATTTAAGCTTATGTCTG +
Preference number: 5 (lower is better)
Translates to: VADSKCLVLPCALYL*AVNADRTIYLSLCL
Trigger: CAGACATAAGCTTAAATAGATTGTCCTGTCTGCATTCACAGCTCACAAATACAGTGCACACGGTAGAACGAGGCATTTTGAATCAGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532015.1
CDS CCA 90 bp ACCTTCCTTTGTTTTCATCTTCCCATCACCTTTCCTGTTGTCATTTaGCTTCTTGGTGGACTAATGACCTTCTCTCTAAAAGGAAGCATC +
Preference number: 5 (lower is better)
Translates to: TFLCFHLPITFPVVI*LLGGLMTFSLKGSI
Trigger: GATGCTTCCTTTTAGAGAGAAGGTCATTAGTCCACCAAGAAGCCAAATGACAACAGGAAAGGTGATGGGAAGATGAAAACAAAGGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521946.5
CDS-3UTR CAA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGATAATCTTTCTCGTTTaGTTCATGACTTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLIIFLV*FMTCRD
Trigger: GTCCCTGCAAGTCATGAACAAAACGAGAAAGATTAT...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAAATCCATGCTTTTCTTaGATGCCATTGCGACAAACA +
Preference number: 5 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSNPCFS*MPLRQT
Trigger: TGTTTGTCGCAATGGCATCAAAGAAAAGCATGGATT...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTAATCCATGCTTTTCTTaGATGCCATTGCGACAAACA +
Preference number: 5 (lower is better)
Translates to: GGLFDFVTMTANSETDKPNPCFS*MPLRQT
Trigger: TGTTTGTCGCAATGGCATCAAAGAAAAGCATGGATT...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAATCCATGCTTTTCTTaGATGCCATTGCGACAAACA +
Preference number: 5 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFNPCFS*MPLRQT
Trigger: TGTTTGTCGCAATGGCATCAAAGAAAAGCATGGATT...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCGTGATTCTTCTCCACCTTGGTCAACATCTTCCCCGCTATGCTGGAATTACTCAAATTTTGGCCTTCTaGTTTGTTCGAAACCTGTTA +
Preference number: 5 (lower is better)
Translates to: FVILLHLGQHLPRYAGITQILAF*FVRNLL
Trigger: TAACAGGTTTCGAACAAACAAGAAGGCCAAAATTTG...AGTAATTCCAGCATAGCGGGGAAGATGTTGACCAAGGTGGAGAAGAATCACGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGGACTGTTGGATATTCTaGCTGGATTCTTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLDCWIF*LDSSFL
Trigger: TAAGAAGGAAGAATCCAGCAAGAATATCCAACAGTC...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAATTTGGGCAAGTGATTaGACTGTTGGATATTCTTGC +
Preference number: 5 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSIWASD*TVGYSC
Trigger: GCAAGAATATCCAACAGTCAAATCACTTGCCCAAAT...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTCTACAACTGCACTCTTaGTCTTTGTCATGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCLQLHS*SLSWKP
Trigger: CGGCTTCCATGACAAAGACAAAGAGTGCAGTTGTAG...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTTCTTGGTTGCAACACTaGCAATTCTTCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFSWLQH*QFFFFF
Trigger: GAAGAAGAAGAAGAATTGCAAGTGTTGCAACCAAGA...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTGGAAGAATAAAACACTaGTGTGTCACTCGGACAGTG +
Preference number: 5 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTGRIKH*CVTRTV
Trigger: CACTGTCCGAGTGACACACAAGTGTTTTATTCTTCC...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TACTCTTGGCAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGAGAGCTTCAATCTCTTaGTCAATGTATGCCTTATGG +
Preference number: 5 (lower is better)
Translates to: YSWQIVNYNDESPCAHRLRASIS*SMYALW
Trigger: CCATAAGGCATACATTGACAAAGAGATTGAAGCTCT...CAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTGCCAAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAATACTGTGTGTCGTCCTaGGGGGTTTATTTGACTTTG +
Preference number: 5 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEYCVSS*GVYLTL
Trigger: CAAAGTCAAATAAACCCCCAAGGACGACACACAGTA...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp CAGATAGTAAATTATAACGATGAGTCTCCGTGTGCACACCGCTTGCTCACATGCTTCTCTTGTGGTATGTaGAAATTGTGGAGCATTCAT +
Preference number: 5 (lower is better)
Translates to: QIVNYNDESPCAHRLLTCFSCGM*KLWSIH
Trigger: ATGAATGCTCCACAATTTCAACATACCACAAGAGAA...GCATGTGAGCAAGCGGTGTGCACACGGAGACTCATCGTTATAATTTACTATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS GCA 90 bp CATTGGTCCTGTGTACTGCATAATCCAGTGTTTATCCATATTTGGTaGATAGTTATAACTAGGAGTTCCATAGCACATACTTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: HWSCVLHNPVFIHIW*IVITRSSIAHTCTW
Trigger: CCAGGTGCAAGTATGTGCTATGGAACTCCTAGTTATAACTATGCACCAAATATGGATAAACACTGGATTATGCAGTACACAGGACCAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521946.5
CDS-3UTR CAA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAATGTGTTGGGAAGCATaGGGGTACAGTTTAGAAAAC +
Preference number: 5 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEMCWEA*GYSLEN
Trigger: GTTTTCTAAACTGTACCCCAATGCTTCCCAACACAT...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTAAAGTCTGGAGCCTTTaGCGCTGTAGAATGTTTGTA +
Preference number: 5 (lower is better)
Translates to: TDDTHIRQAANLNICTESKVWSL*RCRMFV
Trigger: TACAAACATTCTACAGCGCAAAAGGCTCCAGACTTT...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CAA 90 bp CATTACGCAGGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTCAAATTTTGGCCTTCTaGTTTGTTCGAAACCTGTTA +
Preference number: 5 (lower is better)
Translates to: HYAGSGSVLKDLPGVSSFQILAF*FVRNLL
Trigger: TAACAGGTTTCGAACAAACAAGAAGGCCAAAATTTG...AAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCCTGCGTAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTGTATCACGCCAAATTTaGGCCTTCTTGTTTGTTCGA +
Preference number: 5 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTVSRQI*AFLFVR
Trigger: TCGAACAAACAAGAAGGCCAAAATTTGGCGTGATAC...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GGCAGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCATTCTTACGTAGAAATTaGCCTCTTTCCACTAGGAAT +
Preference number: 5 (lower is better)
Translates to: GSGSVLKDLPGVSSFRHSFLRRN*PLSTRN
Trigger: ATTCCTAGTGGAAAGAGGCAAATTTCTACGTAAGAA...TGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GGGGGTTTATTTGACTTTGTCACAATGACAGCCAACAGTGAGACTGATAAGCCTTTCTTACGTAGAAATTaGCCTCTTTCCACTAGGAAT +
Preference number: 5 (lower is better)
Translates to: GGLFDFVTMTANSETDKPFLRRN*PLSTRN
Trigger: ATTCCTAGTGGAAAGAGGCAAATTTCTACGTAAGAA...AGGCTTATCAGTCTCACTGTTGGCTGTCATTGTGACAAAGTCAAATAAACCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAACTACGGTTGTTCTCCTaGAAAAGTTGCAGTTTGCTA +
Preference number: 5 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSELRLFS*KSCSLL
Trigger: TAGCAAACTGCAACTTTTCAAGGAGAACAACCGTAG...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS GCA 90 bp AAACCAGAGCACAGCAAGAATACTTCATTGTATTTGGTCCAATGTTaGAAAACTGACAAAATGTCTCCGTCTCCTGATTTCTGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: KPEHSKNTSLYLVQC*KTDKMSPSPDFWSS
Trigger: AGAACTCCAGAAATCAGGAGACGGAGACATTTTGTCAGTTTTGCAACATTGGACCAAATACAATGAAGTATTCTTGCTGTGCTCTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000525061.5
ENST00000525999.5
ENST00000528783.5
ENST00000529134.5
ENST00000534179.5
ENST00000616868.1
CDS GCA 90 bp CATTGGTCCTGTGTACTGCATAATCCAGTGTTTATCCATATTTGGTaGATAGTTATAACTAGGAGTTATGTGTTGGGAAGCATTGGGGTA +
Preference number: 5 (lower is better)
Translates to: HWSCVLHNPVFIHIW*IVITRSYVLGSIGV
Trigger: TACCCCAATGCTTCCCAACACATAACTCCTAGTTATAACTATGCACCAAATATGGATAAACACTGGATTATGCAGTACACAGGACCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000616868.1
CDS-3UTR CAA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTATAATCTTTCTCGTTTaGTTCATGACTTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: TDDTHIRQAANLNICTESIIFLV*FMTCRD
Trigger: GTCCCTGCAAGTCATGAACAAAACGAGAAAGATTAT...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CAA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAATAATCTTTCTCGTTTaGTTCATGACTTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEIIFLV*FMTCRD
Trigger: GTCCCTGCAAGTCATGAACAAAACGAGAAAGATTAT...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TGTCAAACAATATGTGATCCATACTGTGTGTCGTCCTTGGGGGTTTATTTGACTATAATCTTTCTCGTTTaGTTCATGACTTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: CQTICDPYCVSSLGVYLTIIFLV*FMTCRD
Trigger: GTCCCTGCAAGTCATGAACAAAACGAGAAAGATTAT...AGTCAAATAAACCCCCAAGGACGACACACAGTATGGATCACATATTGTTTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp ACCGATGATACACACATCAGGCAAGCAGCTAATTTGAACATATGTACAGAGTCTATTTGGGCAAGTGATTaGACTGTTGGATATTCTTGC +
Preference number: 5 (lower is better)
Translates to: TDDTHIRQAANLNICTESIWASD*TVGYSC
Trigger: GCAAGAATATCCAACAGTCAAATCACTTGCCCAAAT...AGACTCTGTACATATGTTCAAATTAGCTGCTTGCCTGATGTGTGTATCATCGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CAA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAATCTTGGTTGCAACACTaGCAATTCTTCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSESWLQH*QFFFFF
Trigger: GAAGAAGAAGAAGAATTGCAAGTGTTGCAACCAAGA...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGAGCTTCAATCTCTTaGTCAATGTATGCCTTATGG +
Preference number: 5 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSERASIS*SMYALW
Trigger: CCATAAGGCATACATTGACAAAGAGATTGAAGCTCT...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATAGAGCTTCAATCTCTTaGTCAATGTATGCCTTATGG +
Preference number: 5 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYRASIS*SMYALW
Trigger: CCATAAGGCATACATTGACAAAGAGATTGAAGCTCT...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAGTTCTCCTTGAAAAGTaGCAGTTTGCTATCTACTTC +
Preference number: 5 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSEVLLEK*QFAIYF
Trigger: GAAGTAGATAGCAAACTGCAACTTTTCAAGGAGAAC...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTCTACGGTTGTTCTCCTaGAAAAGTTGCAGTTTGCTA +
Preference number: 5 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCLRLFS*KSCSLL
Trigger: TAGCAAACTGCAACTTTTCAAGGAGAACAACCGTAG...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS-3UTR CAA 90 bp ATTAGTCCAGTCCACCAGACTAAGTCTGTAGTTTTGTCTGTACTCATAGATGTTCAAGAACCCGTCACTTaGAGCAGTTTGAGTCTTATT +
Preference number: 5 (lower is better)
Translates to: ISPVHQTKSVVLSVLIDVQEPVT*SSLSLI
Trigger: AATAAGACTCAAACTGCTCAAAGTGACGGGTTCTTG...AACATCTATGAGTACAGACAAAACTACAGACTTAGTCTGGTGGACTGGACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000531512.5
CDS TCA 90 bp CACCATCATAACGGGCCTTTGCATAATCAAATCCATGCTTTTCTTTaGTGCCATTGCGACAAACAGTGTAATTATAGAAGCGAGAATTCT +
Preference number: 5 (lower is better)
Translates to: HHHNGPLHNQIHAFL*CHCDKQCNYRSENS
Trigger: AGAATTCTCGCTTCTATAATTACACTGTTTGTCGCAATGGCATCAAAGAAAAGCATGGATTTGATTATGCAAAGGCCCGTTATGATGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531064.5
CDS-3UTR CAA 90 bp AGTGGAAGTGTGTTGAAAGATTTACCAGGGGTGTCAAGTTTTAGACACTCAGAAAGCAAGAATACTTCATaGTATTTGGTCCAATGTTGC +
Preference number: 5 (lower is better)
Translates to: SGSVLKDLPGVSSFRHSESKNTS*YLVQCC
Trigger: GCAACATTGGACCAAATACAATGAAGTATTCTTGCT...TTCTGAGTGTCTAAAACTTGACACCCCTGGTAAATCTTTCAACACACTTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GCCAACCCAAATATCCCCAGCCTTTCTTTCTACTCTTGGCAGATAGTAAATTATAGCAAGAATACTTCATaGTATTTGGTCCAATGTTGC +
Preference number: 5 (lower is better)
Translates to: ANPNIPSLSFYSWQIVNYSKNTS*YLVQCC
Trigger: GCAACATTGGACCAAATACAATGAAGTATTCTTGCT...ATAATTTACTATCTGCCAAGAGTAGAAAGAAAGGCTGGGGATATTTGGGTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAATTTTGGCCTTCTTGTTaGTTCGAAACCTGTTACCTG +
Preference number: 5 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKFWPSC*FETCYL
Trigger: CAGGTAACAGGTTTCGAACAAACAAGAAGGCCAAAA...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTAGCAAGAATACTTCATaGTATTTGGTCCAATGTTGC +
Preference number: 5 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCSKNTS*YLVQCC
Trigger: GCAACATTGGACCAAATACAATGAAGTATTCTTGCT...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTTCTTACGTAGAAATTaGCCTCTTTCCACTAGGAAT +
Preference number: 5 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCFLRRN*PLSTRN
Trigger: ATTCCTAGTGGAAAGAGGCAAATTTCTACGTAAGAA...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAGACTGTTGGATATTCTaGCTGGATTCTTCCTTCTTA +
Preference number: 5 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKDCWIF*LDSSFL
Trigger: TAAGAAGGAAGAATCCAGCAAGAATATCCAACAGTC...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS-3UTR CAA 90 bp TTCCAGTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTTCTCTTGTGGTATGTaGAAATTGTGGAGCATTCAT +
Preference number: 5 (lower is better)
Translates to: FQWLKMNQNFITQAVEVCFSCGM*KLWSIH
Trigger: ATGAATGCTCCACAATTTCAACATACCACAAGAGAA...ACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCACTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000458141.6
CDS-3UTR CAA 90 bp GTGGTTAAAAATGAATCAAAACTTCATTACGCAGGCAGTGGAAGTGTGTTGAAAAGCAAGAATACTTCATaGTATTTGGTCCAATGTTGC +
Preference number: 5 (lower is better)
Translates to: VVKNESKLHYAGSGSVLKSKNTS*YLVQCC
Trigger: GCAACATTGGACCAAATACAATGAAGTATTCTTGCT...TTTCAACACACTTCCACTGCCTGCGTAATGAAGTTTTGATTCATTTTTAACCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
CDS CCA 72 bp CCTGACCTCCGAGGAGCGCCGGCAGCCGGGAAGGCCTaGCCTCTGATCCTCGCTGCCCTCGCTCCTGGCCTC +
Preference number: 6 (lower is better)
Translates to: PDLRGAPAAGKA*PLILAALAPGL
Trigger: GAGGCCAGGAGCGAGGGCAGCGAGGATCAGAGGCCAGGCCTTCCCGGCTGCCGGCGCTCCTCGGAGGTCAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402687.9
ENST00000419716.7
ENST00000529041.5
ENST00000616868.1
CDS CCA 72 bp CTGATCCTCGCTGCCCTCGCTCCTGGCCTCTGCGCCTaGGGTTTCCTAGTTGCCGATCAAGCCGCCCCGGCC +
Preference number: 6 (lower is better)
Translates to: LILAALAPGLCA*GFLVADQAAPA
Trigger: GGCCGGGGCGGCTTGATCGGCAACTAGGAAACCCCAGGCGCAGAGGCCAGGAGCGAGGGCAGCGAGGATCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402687.9
ENST00000419716.7
ENST00000529041.5
ENST00000616868.1
CDS GCA 72 bp TTCCTCCTCCGAAGGGGGAGAGTCATGTTCCTCATCTaGCCTGACCTCCGAGGAGCGCCGGCAGCCGGGAAG +
Preference number: 6 (lower is better)
Translates to: FLLRRGRVMFLI*PDLRGAPAAGK
Trigger: CTTCCCGGCTGCCGGCGCTCCTCGGAGGTCAGGGCAGATGAGGAACATGACTCTCCCCCTTCGGAGGAGGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402687.9
ENST00000419716.7
ENST00000529041.5
ENST00000616868.1
CDS CCA 72 bp GAAGGCCTGGCCTCTGATCCTCGCTGCCCTCGCTCCTaGCCTCTGCGCCTGGGGTTTCCTAGTTGCCGATCA +
Preference number: 6 (lower is better)
Translates to: EGLASDPRCPRS*PLRLGFPSCRS
Trigger: TGATCGGCAACTAGGAAACCCCAGGCGCAGAGGCCAGGAGCGAGGGCAGCGAGGATCAGAGGCCAGGCCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402687.9
ENST00000419716.7
ENST00000529041.5
ENST00000616868.1
CDS CAA 90 bp GGTGGGCCCACGGCGTTGCTGCTATCTGCCAGCATCCTGCCCCTGTaGCCACCACTGGAAGCCTGGAGATCTCTTGGCCCCTTGTGGCCT +
Preference number: 6 (lower is better)
Translates to: GGPTALLLSASILPL*PPLEAWRSLGPLWP
Trigger: AGGCCACAAGGGGCCAAGAGATCTCCAGGCTTCCAGTGGTGGCAACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS GCA 72 bp GTGGGCCCACGGCGTTGCTGCTATCTGCCAGCATCCTaGCCCTGTTGCCACCACTGGAAGCCTGGAGATCTC +
Preference number: 6 (lower is better)
Translates to: VGPRRCCYLPAS*PCCHHWKPGDL
Trigger: GAGATCTCCAGGCTTCCAGTGGTGGCAACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS GCA 72 bp CGGCGTTGCTGCTATCTGCCAGCATCCTGCCCCTGTTaGCACCACTGGAAGCCTGGAGATCTCTTGGCCCCT +
Preference number: 6 (lower is better)
Translates to: RRCCYLPASCPC*HHWKPGDLLAP
Trigger: AGGGGCCAAGAGATCTCCAGGCTTCCAGTGGTGGCAACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CAA 72 bp ACGGCGTTGCTGCTATCTGCCAGCATCCTGCCCCTGTaGCCACCACTGGAAGCCTGGAGATCTCTTGGCCCC +
Preference number: 6 (lower is better)
Translates to: TALLLSASILPL*PPLEAWRSLGP
Trigger: GGGGCCAAGAGATCTCCAGGCTTCCAGTGGTGGCAACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS GCA 72 bp GGCTGGTTCCTCTGTCCCACTCATGTCCTCAGCTTGTaGCGGCACCTACGTGGACAGAGCCCCCTCTCGATT +
Preference number: 6 (lower is better)
Translates to: GWFLCPTHVLSL*RHLRGQSPLSI
Trigger: AATCGAGAGGGGGCTCTGTCCACGTAGGTGCCGGCACAAGCTGAGGACATGAGTGGGACAGAGGAACCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525112.1
ENST00000534179.5
CDS CCA 72 bp TCCCACTCATGTCCTCAGCTTGTGCCGGCACCTACGTaGACAGAGCCCCCTCTCGATTGTCAGTCACCAGGC +
Preference number: 6 (lower is better)
Translates to: SHSCPQLVPAPT*TEPPLDCQSPG
Trigger: GCCTGGTGACTGACAATCGAGAGGGGGCTCTGTCCACGTAGGTGCCGGCACAAGCTGAGGACATGAGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525112.1
ENST00000534179.5
CDS CAA 90 bp TCCTCCGTGCAAGGCTGGTTCCTCTGTCCCACTCATGTCCTCAGCTaGTGCCGGCACCTACGTGGACAGAGCCCCCTCTCGATTGTCAGT +
Preference number: 6 (lower is better)
Translates to: SSVQGWFLCPTHVLS*CRHLRGQSPLSIVS
Trigger: ACTGACAATCGAGAGGGGGCTCTGTCCACGTAGGTGCCGGCACAAGCTGAGGACATGAGTGGGACAGAGGAACCAGCCTTGCACGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525112.1
ENST00000534179.5
CDS GCA 72 bp GTGAGGCCAGGCAGGCTGCACTCTTCCCCCTTCCTCTaGCGTCTCTTCTCCTTCCTCTCCTTCTTCCTCCTA +
Preference number: 6 (lower is better)
Translates to: VRPGRLHSSPFL*RLFSFLSFFLL
Trigger: TAGGAGGAAGAAGGAGAGGAAGGAGAAGAGACGGCAGAGGAAGGGGGAAGAGTGCAGCCTGCCTGGCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000531512.5
ENST00000616868.1
CDS CAA 90 bp AAACACTTGTGTGTCACTCGGACAGTGGTAGGTGGGCCCACGGCGTaGCTGCTATCTGCCAGCATCCTGCCCCTGTTGCCACCACTGGAA +
Preference number: 6 (lower is better)
Translates to: KHLCVTRTVVGGPTA*LLSASILPLLPPLE
Trigger: TTCCAGTGGTGGCAACAGGGGCAGGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCACCTACCACTGTCCGAGTGACACACAAGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS TCA 72 bp CGCGAGCGTAGAGGTTCCGCGTGCTCTGCCGGACTGTaGGCAGGTCACTGGGTCCTTTACACTTGTGAATTC +
Preference number: 6 (lower is better)
Translates to: RERRGSACSAGL*AGHWVLYTCEF
Trigger: GAATTCACAAGTGTAAAGGACCCAGTGACCTGCTCACAGTCCGGCAGAGCACGCGGAACCTCTACGCTCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CAA 90 bp TCCTCAGCTTGTGCCGGCACCTACGTGGACAGAGCCCCCTCTCGATaGTCAGTCACCAGGCTTATTGTTGGTGAGACTGGTAAGGCACAG +
Preference number: 6 (lower is better)
Translates to: SSACAGTYVDRAPSR*SVTRLIVGETGKAQ
Trigger: CTGTGCCTTACCAGTCTCACCAACAATAAGCCTGGTGACTGACAATCGAGAGGGGGCTCTGTCCACGTAGGTGCCGGCACAAGCTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525112.1
ENST00000534179.5
CDS CCA 72 bp CATTGCCACTTCTGCCCCGGTTGTTCACAGGCTGTCTaGTACCTGGCCTGCTGGCATAGTTCTTTGACCCGT +
Preference number: 6 (lower is better)
Translates to: HCHFCPGCSQAV*YLACWHSSLTR
Trigger: ACGGGTCAAAGAACTATGCCAGCAGGCCAGGTACCAGACAGCCTGTGAACAACCGGGGCAGAAGTGGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CCA 72 bp GCCCCTGTTGCCACCACTGGAAGCCTGGAGATCTCTTaGCCCCTTGTGGCCTTCATCATGACGCTTAGCAAT +
Preference number: 6 (lower is better)
Translates to: APVATTGSLEIS*PLVAFIMTLSN
Trigger: ATTGCTAAGCGTCATGATGAAGGCCACAAGGGGCCAAGAGATCTCCAGGCTTCCAGTGGTGGCAACAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CCA 72 bp AAAGATCCCAGGTTCCAGAACGGGGCTGTCTGCCAGTaGTTGTTGTCATGCGTGAAGCAAGTGAGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: KDPRFQNGAVCQ*LLSCVKQVRPG
Trigger: GCCTGGCCTCACTTGCTTCACGCATGACAACAACCACTGGCAGACAGCCCCGTTCTGGAACCTGGGATCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CAA 72 bp CCTGGCTTTTCTGGGTCCAGAAGTTTGAGGACAGACTaGCCGTCCACATCAGGAGGTGTGTCGAGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: PGFSGSRSLRTD*PSTSGGVSSPA
Trigger: TGCTGGGCTCGACACACCTCCTGATGTGGACGGCAAGTCTGTCCTCAAACTTCTGGACCCAGAAAAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CAA 72 bp TGTGCCGGCACCTACGTGGACAGAGCCCCCTCTCGATaGTCAGTCACCAGGCTTATTGTTGGTGAGACTGGT +
Preference number: 6 (lower is better)
Translates to: CAGTYVDRAPSR*SVTRLIVGETG
Trigger: ACCAGTCTCACCAACAATAAGCCTGGTGACTGACAATCGAGAGGGGGCTCTGTCCACGTAGGTGCCGGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525112.1
ENST00000534179.5
CDS GCA 72 bp TGCCCCGGTTGTTCACAGGCTGTCTGGTACCTGGCCTaGTGGCATAGTTCTTTGACCCGTTCATATTTGGGC +
Preference number: 6 (lower is better)
Translates to: CPGCSQAVWYLA*WHSSLTRSYLG
Trigger: GCCCAAATATGAACGGGTCAAAGAACTATGCCAGCAGGCCAGGTACCAGACAGCCTGTGAACAACCGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS GCA 72 bp GGCTTCTGCTGGCACGGTAACCAGACTCCCTACAACTaGACTCTTTGTCTTTGTCATGGAAGCCGCGAGCGT +
Preference number: 6 (lower is better)
Translates to: GFCWHGNQTPYN*TLCLCHGSRER
Trigger: ACGCTCGCGGCTTCCATGACAAAGACAAAGAGTGCAGTTGTAGGGAGTCTGGTTACCGTGCCAGCAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS GCA 72 bp GCACAGAAAGATCCCAGGTTCCAGAACGGGGCTGTCTaGCAGTGGTTGTTGTCATGCGTGAAGCAAGTGAGG +
Preference number: 6 (lower is better)
Translates to: AQKDPRFQNGAV*QWLLSCVKQVR
Trigger: CCTCACTTGCTTCACGCATGACAACAACCACTGGCAGACAGCCCCGTTCTGGAACCTGGGATCTTTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CCA 72 bp TCACCAGAAGGAAAAGGTGCTTCCTCCGTGCAAGGCTaGTTCCTCTGTCCCACTCATGTCCTCAGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: SPEGKGASSVQG*FLCPTHVLSLC
Trigger: GCACAAGCTGAGGACATGAGTGGGACAGAGGAACCAGCCTTGCACGGAGGAAGCACCTTTTCCTTCTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525112.1
ENST00000534179.5
CDS CCA 72 bp AATAAAACACTTGTGTGTCACTCGGACAGTGGTAGGTaGGCCCACGGCGTTGCTGCTATCTGCCAGCATCCT +
Preference number: 6 (lower is better)
Translates to: NKTLVCHSDSGR*AHGVAAICQHP
Trigger: AGGATGCTGGCAGATAGCAGCAACGCCGTGGGCCCACCTACCACTGTCCGAGTGACACACAAGTGTTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS TCA 72 bp ACAGGCCCTGGAGCTGTCAGCTGGAACACAAGCCACTaGAAAAAGCAGGTACCCATAGCACATACTTGCACC +
Preference number: 6 (lower is better)
Translates to: TGPGAVSWNTSH*KKQVPIAHTCT
Trigger: GGTGCAAGTATGTGCTATGGGTACCTGCTTTTTTCAGTGGCTTGTGTTCCAGCTGACAGCTCCAGGGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528146.1
CDS CAA 90 bp GTGTCGAGCCCAGCAATATCCAGGATCGTGGGGGCCAAGTCAATGTaGAGAACGATCTGTGGGACTATTGATCCTGGTTCTACACTTGGA +
Preference number: 6 (lower is better)
Translates to: VSSPAISRIVGAKSM*RTICGTIDPGSTLG
Trigger: TCCAAGTGTAGAACCAGGATCAATAGTCCCACAGATCGTTCTCAACATTGACTTGGCCCCCACGATCCTGGATATTGCTGGGCTCGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CAA 90 bp CTTTGGAGTCCCCTGGTTTCTCAAGAATTGCCGTTGACTCTTTCTTaGGCTTCTGCTGGCACGGTAACCAGACTCCCTACAACTGCACTC +
Preference number: 6 (lower is better)
Translates to: LWSPLVSQELPLTLS*ASAGTVTRLPTTAL
Trigger: GAGTGCAGTTGTAGGGAGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGAGAAACCAGGGGACTCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CAA 90 bp TCTGGGCTTGTACTTTGGAGTCCCCTGGTTTCTCAAGAATTGCCGTaGACTCTTTCTTTGGCTTCTGCTGGCACGGTAACCAGACTCCCT +
Preference number: 6 (lower is better)
Translates to: SGLVLWSPLVSQELP*TLSLASAGTVTRLP
Trigger: AGGGAGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS TCA 72 bp GCCTGGAGATCTCTTGGCCCCTTGTGGCCTTCATCATaGCGCTTAGCAATGTTTCTTGGTTGCAACACTTGC +
Preference number: 6 (lower is better)
Translates to: AWRSLGPLWPSS*RLAMFLGCNTC
Trigger: GCAAGTGTTGCAACCAAGAAACATTGCTAAGCGTCATGATGAAGGCCACAAGGGGCCAAGAGATCTCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS TCA 72 bp ACAGGCCCTGGAGCTGTCAGCTGGAACACAAGCCACTaGAAAAAGCAGGTACCCTGTCTGTTCCATTGGAAT +
Preference number: 6 (lower is better)
Translates to: TGPGAVSWNTSH*KKQVPCLFHWN
Trigger: ATTCCAATGGAACAGACAGGGTACCTGCTTTTTTCAGTGGCTTGTGTTCCAGCTGACAGCTCCAGGGCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534088.1
CDS GCA 72 bp GTTTGCGAATGCACCAATCGACACTCTGTATCTAGCTaGTCTGGTGGGGCCTTGGAGAACCTGTGTGTCAAA +
Preference number: 6 (lower is better)
Translates to: VCECTNRHSVSS*SGGALENLCVK
Trigger: TTTGACACACAGGTTCTCCAAGGCCCCACCAGAGCAGCTAGATACAGAGTGTCGATTGGTGCATTCGCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524731.1
CDS GCA 72 bp TCAATCAATCACCAGAAGGAAAAGGTGCTTCCTCCGTaGAAGGCTGGTTCCTCTGTCCCACTCATGTCCTCA +
Preference number: 6 (lower is better)
Translates to: SINHQKEKVLPP*KAGSSVPLMSS
Trigger: TGAGGACATGAGTGGGACAGAGGAACCAGCCTTGCACGGAGGAAGCACCTTTTCCTTCTGGTGATTGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525112.1
ENST00000534179.5
CDS CCA 72 bp CGGACAAGGAACGTGTCTGCCGAGTATGGACAAATCTaGGCTTGTACTTTGGAGTCCCCTGGTTTCTCAAGA +
Preference number: 6 (lower is better)
Translates to: RTRNVSAEYGQI*ACTLESPGFSR
Trigger: TCTTGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGATTTGTCCATACTCGGCAGACACGTTCCTTGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CCA 72 bp TCAAATTCGACGGACAAGGAACGTGTCTGCCGAGTATaGACAAATCTGGGCTTGTACTTTGGAGTCCCCTGG +
Preference number: 6 (lower is better)
Translates to: SNSTDKERVCRV*TNLGLYFGVPW
Trigger: CCAGGGGACTCCAAAGTACAAGCCCAGATTTGTCCATACTCGGCAGACACGTTCCTTGTCCGTCGAATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CAA 72 bp CCCCTGGTTTCTCAAGAATTGCCGTTGACTCTTTCTTaGGCTTCTGCTGGCACGGTAACCAGACTCCCTACA +
Preference number: 6 (lower is better)
Translates to: PLVSQELPLTLS*ASAGTVTRLPT
Trigger: TGTAGGGAGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGAGAAACCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CAA 72 bp GGGCTTGTACTTTGGAGTCCCCTGGTTTCTCAAGAATaGCCGTTGACTCTTTCTTTGGCTTCTGCTGGCACG +
Preference number: 6 (lower is better)
Translates to: GLVLWSPLVSQE*PLTLSLASAGT
Trigger: CGTGCCAGCAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGAGAAACCAGGGGACTCCAAAGTACAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS GCA 72 bp ACTTGTGAATTCGAAGCTTGCCAGATGTATCCTCAATaGATTGCCACTTCTGCCCCGGTTGTTCACAGGCTG +
Preference number: 6 (lower is better)
Translates to: TCEFEACQMYPQ*IATSAPVVHRL
Trigger: CAGCCTGTGAACAACCGGGGCAGAAGTGGCAATGCATTGAGGATACATCTGGCAAGCTTCGAATTCACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CAA 72 bp CCAGCAATATCCAGGATCGTGGGGGCCAAGTCAATGTaGAGAACGATCTGTGGGACTATTGATCCTGGTTCT +
Preference number: 6 (lower is better)
Translates to: PAISRIVGAKSM*RTICGTIDPGS
Trigger: AGAACCAGGATCAATAGTCCCACAGATCGTTCTCAACATTGACTTGGCCCCCACGATCCTGGATATTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CAA 90 bp GACAAATCTGGGCTTGTACTTTGGAGTCCCCTGGTTTCTCAAGAATaGCCGTTGACTCTTTCTTTGGCTTCTGCTGGCACGGTAACCAGA +
Preference number: 6 (lower is better)
Translates to: DKSGLVLWSPLVSQE*PLTLSLASAGTVTR
Trigger: TCTGGTTACCGTGCCAGCAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGAGAAACCAGGGGACTCCAAAGTACAAGCCCAGATTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS TCA 72 bp CGGACTGTGAGCAGGTCACTGGGTCCTTTACACTTGTaGATTCGAAGCTTGCCAGATGTATCCTCAATGCAT +
Preference number: 6 (lower is better)
Translates to: RTVSRSLGPLHL*IRSLPDVSSMH
Trigger: ATGCATTGAGGATACATCTGGCAAGCTTCGAATTCACAAGTGTAAAGGACCCAGTGACCTGCTCACAGTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS TCA 72 bp ACCTGCATGTCATTTGCCAAGTTTATCTTCTTTAGATaGTGGTGGGTGGCCGTCAGCACAAAAGCCGCCTTC +
Preference number: 6 (lower is better)
Translates to: TCMSFAKFIFFR*WWVAVSTKAAF
Trigger: GAAGGCGGCTTTTGTGCTGACGGCCACCCACCATCATCTAAAGAAGATAAACTTGGCAAATGACATGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419716.7
ENST00000529041.5
CDS TCA 72 bp ACCTGCATGTCATTTGCCAAGTTTATCTTCTTTAGATaGTGGTGGGTGGCCGTCAGCACCGTCATCTGTCAG +
Preference number: 6 (lower is better)
Translates to: TCMSFAKFIFFR*WWVAVSTVICQ
Trigger: CTGACAGATGACGGTGCTGACGGCCACCCACCATCATCTAAAGAAGATAAACTTGGCAAATGACATGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529134.5
CDS TCA 72 bp TATTGGCACATAAGCTGGCAGAGACAGGGTTGCACATaGGTCAGAAATAGCAAACCCTCACAAGTGCTGGGT +
Preference number: 6 (lower is better)
Translates to: YWHISWQRQGCT*VRNSKPSQVLG
Trigger: ACCCAGCACTTGTGAGGGTTTGCTATTTCTGACTCATGTGCAACCCTGTCTCTGCCAGCTTATGTGCCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525112.1
CDS GCA 72 bp GGTCACTGGGTCCTTTACACTTGTGAATTCGAAGCTTaGCAGATGTATCCTCAATGCATTGCCACTTCTGCC +
Preference number: 6 (lower is better)
Translates to: GHWVLYTCEFEA*QMYPQCIATSA
Trigger: GGCAGAAGTGGCAATGCATTGAGGATACATCTGGCAAGCTTCGAATTCACAAGTGTAAAGGACCCAGTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS GCA 72 bp TTCTCAAGAATTGCCGTTGACTCTTTCTTTGGCTTCTaGTGGCACGGTAACCAGACTCCCTACAACTGCACT +
Preference number: 6 (lower is better)
Translates to: FSRIAVDSFFGF*WHGNQTPYNCT
Trigger: AGTGCAGTTGTAGGGAGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CCA 72 bp CTTCTTGTTTGTTCGAAACCTGTTACCTGGCTTTTCTaGGTCCAGAAGTTTGAGGACAGACTTGCCGTCCAC +
Preference number: 6 (lower is better)
Translates to: LLVCSKPVTWLF*VQKFEDRLAVH
Trigger: GTGGACGGCAAGTCTGTCCTCAAACTTCTGGACCCAGAAAAGCCAGGTAACAGGTTTCGAACAAACAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CCA 72 bp TCAAGAATTGCCGTTGACTCTTTCTTTGGCTTCTGCTaGCACGGTAACCAGACTCCCTACAACTGCACTCTT +
Preference number: 6 (lower is better)
Translates to: SRIAVDSFFGFC*HGNQTPYNCTL
Trigger: AAGAGTGCAGTTGTAGGGAGTCTGGTTACCGTGCCAGCAGAAGCCAAAGAAAGAGTCAACGGCAATTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS TCA 72 bp ACCTGCATGTCATTTGCCAAGTTTATCTTCTTTAGATaGTGGTGGGTGGCCGTCAGCACCTCTCCATTCCAA +
Preference number: 6 (lower is better)
Translates to: TCMSFAKFIFFR*WWVAVSTSPFQ
Trigger: TTGGAATGGAGAGGTGCTGACGGCCACCCACCATCATCTAAAGAAGATAAACTTGGCAAATGACATGCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000525061.5
ENST00000616868.1
CDS CCA 72 bp ATGTATGCCTTATGGTCCTTCCACGCTCTGGCCGATTaGTACAGTTCTCTCTCACAATGGATAGAGTCATTG +
Preference number: 6 (lower is better)
Translates to: MYALWSFHALAD*YSSLSQWIESL
Trigger: CAATGACTCTATCCATTGTGAGAGAGAACTGTACCAATCGGCCAGAGCGTGGAAGGACCATAAGGCATACAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000524731.1
ENST00000616868.1
CDS CAA 72 bp CACAGTTGCAGAGAAAGGGCTACAAATAAGTCAGTATaGGCACATAAGCTGGCAGAGACAGGGTTGCACATG +
Preference number: 6 (lower is better)
Translates to: HSCRERATNKSV*AHKLAETGLHM
Trigger: CATGTGCAACCCTGTCTCTGCCAGCTTATGTGCCAATACTGACTTATTTGTAGCCCTTTCTCTGCAACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525112.1
CDS CAA 72 bp TCACTGGAATTGACAATGTTGTTGAAAAGTGATCTTTaGCCAAAGGCCTGTGGTTGCCCCCTGCTGAGGTCT +
Preference number: 6 (lower is better)
Translates to: SLELTMLLKSDL*PKACGCPLLRS
Trigger: AGACCTCAGCAGGGGGCAACCACAGGCCTTTGGCAAAAGATCACTTTTCAACAACATTGTCAATTCCAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528146.1
ENST00000534088.1
CDS CAA 90 bp CTCTTTGTCAATGTATGCCTTATGGTCCTTCCACGCTCTGGCCGATaGGTACAGTTCTCTCTCACAATGGATAGAGTCATTGGGAAGAAT +
Preference number: 6 (lower is better)
Translates to: LFVNVCLMVLPRSGR*VQFSLTMDRVIGKN
Trigger: ATTCTTCCCAATGACTCTATCCATTGTGAGAGAGAACTGTACCAATCGGCCAGAGCGTGGAAGGACCATAAGGCATACATTGACAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000524731.1
ENST00000616868.1
CDS CAA 90 bp AACTCCAAGCACAGTTGCAGAGAAAGGGCTACAAATAAGTCAGTATaGGCACATAAGCTGGCAGAGACAGGGTTGCACATGAGTCAGAAA +
Preference number: 6 (lower is better)
Translates to: NSKHSCRERATNKSV*AHKLAETGLHMSQK
Trigger: TTTCTGACTCATGTGCAACCCTGTCTCTGCCAGCTTATGTGCCAATACTGACTTATTTGTAGCCCTTTCTCTGCAACTGTGCTTGGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525112.1
CDS GCA 72 bp ATTTCACCTTCAAATTCGACGGACAAGGAACGTGTCTaGCGAGTATGGACAAATCTGGGCTTGTACTTTGGA +
Preference number: 6 (lower is better)
Translates to: ISPSNSTDKERV*RVWTNLGLYFG
Trigger: TCCAAAGTACAAGCCCAGATTTGTCCATACTCGGCAGACACGTTCCTTGTCCGTCGAATTTGAAGGTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CAA 72 bp AATGTATGCCTTATGGTCCTTCCACGCTCTGGCCGATaGGTACAGTTCTCTCTCACAATGGATAGAGTCATT +
Preference number: 6 (lower is better)
Translates to: NVCLMVLPRSGR*VQFSLTMDRVI
Trigger: AATGACTCTATCCATTGTGAGAGAGAACTGTACCAATCGGCCAGAGCGTGGAAGGACCATAAGGCATACATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000524731.1
ENST00000616868.1
CDS TCA 72 bp GATTCATTAGCGACGGTCTGCGAAGTGCTCGCAAGATaGAGACGGTTATATAAGCCCGCGTATTATTATCAT +
Preference number: 6 (lower is better)
Translates to: DSLATVCEVLAR*RRLYKPAYYYH
Trigger: ATGATAATAATACGCGGGCTTATATAACCGTCTTCATCTTGCGAGCACTTCGCAGACCGTCGCTAATGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419716.7
ENST00000616868.1
CDS GCA 72 bp TTTATCTTGCAGAGCTTCAATCTCTTTGTCAATGTATaGCTTATGGTCCTTCCACGCTCTGGCCGATTGGTA +
Preference number: 6 (lower is better)
Translates to: FILQSFNLFVNV*LMVLPRSGRLV
Trigger: TACCAATCGGCCAGAGCGTGGAAGGACCATAAGGCATACATTGACAAAGAGATTGAAGCTCTGCAAGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000524731.1
ENST00000616868.1
CDS GCA 72 bp GAGAATGCTGTTAGAACAAGCATGCACCCCCAGCTTTaGTCTGTGCAACACGGTAAGAAACAGAAATTAGTT +
Preference number: 6 (lower is better)
Translates to: ENAVRTSMHPQL*SVQHGKKQKLV
Trigger: AACTAATTTCTGTTTCTTACCGTGTTGCACAGAGCAAAGCTGGGGGTGCATGCTTGTTCTAACAGCATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526654.1
CDS GCA 72 bp CATTATTTTTCGCTTCTCTGGAAGGGATATCCCGTGTaGTCAAACACTTTCACAGCTGGTAGAATGCTGATG +
Preference number: 6 (lower is better)
Translates to: HYFSLLWKGYPV*SNTFTAGRMLM
Trigger: CATCAGCATTCTACCAGCTGTGAAAGTGTTTGAGCACACGGGATATCCCTTCCAGAGAAGCGAAAAATAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528286.1
CDS CCA 72 bp AGCCTTTTGCGCTGTAGAATGTTTGTAAATTCCATGTaGATGGGCAGCATTGGTCCTGTGTACTGCATAATC +
Preference number: 6 (lower is better)
Translates to: SLLRCRMFVNSM*MGSIGPVYCII
Trigger: GATTATGCAGTACACAGGACCAATGCTGCCCATCCACATGGAATTTACAAACATTCTACAGCGCAAAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CCA 72 bp AGCCTCTCCACAGAATCATCCACTGACATCAAAGTCTaGAGCCTTTTGCGCTGTAGAATGTTTGTAAATTCC +
Preference number: 6 (lower is better)
Translates to: SLSTESSTDIKV*SLLRCRMFVNS
Trigger: GGAATTTACAAACATTCTACAGCGCAAAAGGCTCCAGACTTTGATGTCAGTGGATGATTCTGTGGAGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CCA 72 bp TGCCTCTTTCCACTAGGAATGTATCACGCCAAATTTTaGCCTTCTTGTTTGTTCGAAACCTGTTACCTGGCT +
Preference number: 6 (lower is better)
Translates to: CLFPLGMYHAKF*PSCLFETCYLA
Trigger: AGCCAGGTAACAGGTTTCGAACAAACAAGAAGGCCAAAATTTGGCGTGATACATTCCTAGTGGAAAGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CCA 72 bp CCCATAACTGTCCTCAACATCAAGATTCTTAGGTCTTaGGTTGCACTGCTTATATCCTTGACAGCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: PITVLNIKILRS*VALLISLTASE
Trigger: CTCAGAAGCTGTCAAGGATATAAGCAGTGCAACCCAAGACCTAAGAATCTTGATGTTGAGGACAGTTATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532015.1
CDS CAA 72 bp TCCACTAGGAATGTATCACGCCAAATTTTGGCCTTCTaGTTTGTTCGAAACCTGTTACCTGGCTTTTCTGGG +
Preference number: 6 (lower is better)
Translates to: STRNVSRQILAF*FVRNLLPGFSG
Trigger: CCCAGAAAAGCCAGGTAACAGGTTTCGAACAAACAAGAAGGCCAAAATTTGGCGTGATACATTCCTAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CAA 72 bp TTGCCTCTTTCCACTAGGAATGTATCACGCCAAATTTaGGCCTTCTTGTTTGTTCGAAACCTGTTACCTGGC +
Preference number: 6 (lower is better)
Translates to: LPLSTRNVSRQI*AFLFVRNLLPG
Trigger: GCCAGGTAACAGGTTTCGAACAAACAAGAAGGCCAAAATTTGGCGTGATACATTCCTAGTGGAAAGAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS CAA 72 bp GTACCTAGCAAGCAGAACGAAACACACACCTGTCATTaGTCATCTGCATTATATCATTCTCTACCCCGGAGA +
Preference number: 6 (lower is better)
Translates to: VPSKQNETHTCH*SSALYHSLPRR
Trigger: TCTCCGGGGTAGAGAATGATATAATGCAGATGACAAATGACAGGTGTGTGTTTCGTTCTGCTTGCTAGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525112.1
CDS CAA 90 bp CGTAGAAATTTGCCTCTTTCCACTAGGAATGTATCACGCCAAATTTaGGCCTTCTTGTTTGTTCGAAACCTGTTACCTGGCTTTTCTGGG +
Preference number: 6 (lower is better)
Translates to: RRNLPLSTRNVSRQI*AFLFVRNLLPGFSG
Trigger: CCCAGAAAAGCCAGGTAACAGGTTTCGAACAAACAAGAAGGCCAAAATTTGGCGTGATACATTCCTAGTGGAAAGAGGCAAATTTCTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS TCA 72 bp TCAAAATGCCTCGTTCTACCGTGTGCACTGTATTTGTaGGCTGTGAATGCAGACAGGACAATCTATTTAAGC +
Preference number: 6 (lower is better)
Translates to: SKCLVLPCALYL*AVNADRTIYLS
Trigger: GCTTAAATAGATTGTCCTGTCTGCATTCACAGCTCACAAATACAGTGCACACGGTAGAACGAGGCATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532015.1
CDS GCA 72 bp CGTTCTACCGTGTGCACTGTATTTGTGAGCTGTGAATaGAGACAGGACAATCTATTTAAGCTTATGTCTGGT +
Preference number: 6 (lower is better)
Translates to: RSTVCTVFVSCE*RQDNLFKLMSG
Trigger: ACCAGACATAAGCTTAAATAGATTGTCCTGTCTGCATTCACAGCTCACAAATACAGTGCACACGGTAGAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532015.1
CDS CAA 90 bp CACCTTCCTTTGTTTTCATCTTCCCATCACCTTTCCTGTTGTCATTaGGCTTCTTGGTGGACTAATGACCTTCTCTCTAAAAGGAAGCAT +
Preference number: 6 (lower is better)
Translates to: HLPLFSSSHHLSCCH*ASWWTNDLLSKRKH
Trigger: ATGCTTCCTTTTAGAGAGAAGGTCATTAGTCCACCAAGAAGCCAAATGACAACAGGAAAGGTGATGGGAAGATGAAAACAAAGGAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521946.5
CDS TCA 72 bp TGGCATAGTTCTTTGACCCGTTCATATTTGGGCAAGTaGTTTGACTGTTGGATATTCTTGCTGGATTCTTCC +
Preference number: 6 (lower is better)
Translates to: WHSSLTRSYLGK*FDCWIFLLDSS
Trigger: GGAAGAATCCAGCAAGAATATCCAACAGTCAAATCACTTGCCCAAATATGAACGGGTCAAAGAACTATGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000521946.5
ENST00000616868.1
CDS TCA 72 bp CTTCTGTTTACAAAAGGGCACATGTTCCAAATTTGCTaGCCTTTCTTGAATTTCAGAAATGTGCTGCCTAAC +
Preference number: 6 (lower is better)
Translates to: LLFTKGHMFQIC*PFLNFRNVLPN
Trigger: GTTAGGCAGCACATTTCTGAAATTCAAGAAAGGTCAGCAAATTTGGAACATGTGCCCTTTTGTAAACAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530674.1
CDS GCA 72 bp CACAGCAAGAATACTTCATTGTATTTGGTCCAATGTTaGAAAACTGACAAAATGTCTCCGTCTCCTGATTTC +
Preference number: 6 (lower is better)
Translates to: HSKNTSLYLVQC*KTDKMSPSPDF
Trigger: GAAATCAGGAGACGGAGACATTTTGTCAGTTTTGCAACATTGGACCAAATACAATGAAGTATTCTTGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000525061.5
ENST00000525999.5
ENST00000528783.5
ENST00000529134.5
ENST00000534179.5
ENST00000616868.1
CDS GCA 72 bp TGTGTACTGCATAATCCAGTGTTTATCCATATTTGGTaGATAGTTATAACTAGGAGTTATGTGTTGGGAAGC +
Preference number: 6 (lower is better)
Translates to: CVLHNPVFIHIW*IVITRSYVLGS
Trigger: GCTTCCCAACACATAACTCCTAGTTATAACTATGCACCAAATATGGATAAACACTGGATTATGCAGTACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260128.8
ENST00000402687.9
ENST00000419716.7
ENST00000458141.6
ENST00000616868.1
CDS TCA 72 bp TTACAAGCCTCAAATTGGACTCCCGGATTTACAGAATaGCATACGTTAAATCTGGCTTATATTAAAAGGGAA +
Preference number: 6 (lower is better)
Translates to: LQASNWTPGFTE*HTLNLAYIKRE
Trigger: TTCCCTTTTAATATAAGCCAGATTTAACGTATGTCATTCTGTAAATCCGGGAGTCCAATTTGAGGCTTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534088.1
CDS TCA 72 bp CAAAAGGGCACATGTTCCAAATTTGCTGACCTTTCTTaGATTTCAGAAATGTGCTGCCTAACAAGTATTTTT +
Preference number: 6 (lower is better)
Translates to: QKGTCSKFADLS*ISEMCCLTSIF
Trigger: AAAAATACTTGTTAGGCAGCACATTTCTGAAATTCAAGAAAGGTCAGCAAATTTGGAACATGTGCCCTTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530674.1
CDS GCA 72 bp TGTGTACTGCATAATCCAGTGTTTATCCATATTTGGTaGATAGTTATAACTAGGAGTTCCATAGCACATACT +
Preference number: 6 (lower is better)
Translates to: CVLHNPVFIHIW*IVITRSSIAHT
Trigger: AGTATGTGCTATGGAACTCCTAGTTATAACTATGCACCAAATATGGATAAACACTGGATTATGCAGTACACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521946.5