RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SUGP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000064607

Ensembl transcript IDs: ENST00000330854.15, ENST00000337018.10, ENST00000452918.7, ENST00000593795.5, ENST00000594445.1, ENST00000594773.5, ENST00000597280.5, ENST00000598202.1, ENST00000598240.1, ENST00000598863.1, ENST00000600239.5, ENST00000600377.1, ENST00000601879.5

Found 1884 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCGGCCGTGGTGTTTCAGCCTGGTGCCTGAGGATAGGAGGGTCTaGGTCCCGGTGGTCGCTCTCCTCGCCTTCCAGCCCCGGAGCCCT +
Preference number: 1 (lower is better)
Translates to: CRPWCFSLVPEDRRV*VPVVALLAFQPRSP
Trigger: AGGGCTCCGGGGCTGGAAGGCGAGGAGAGCGACCACCGGGACCCAGACCCTCCTATCCTCAGGCACCAGGCTGAAACACCACGGCCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR GCA 90 bp CCTGTGAGAGGCCTGGAGCCTGCCGGCCGTGGTGTTTCAGCCTGGTaGCTGAGGATAGGAGGGTCTGGGTCCCGGTGGTCGCTCTCCTCG +
Preference number: 1 (lower is better)
Translates to: PVRGLEPAGRGVSAW*LRIGGSGSRWSLSS
Trigger: CGAGGAGAGCGACCACCGGGACCCAGACCCTCCTATCCTCAGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCTCACAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 90 bp CACGGAGGGCCAGTGGCATCTCCTCTATCCCGGCTGGCCGGCAGCTaGCAGCACGCACCATGCTCTGCTGGCTCCCGACACCTTCACTGC +
Preference number: 1 (lower is better)
Translates to: HGGPVASPLSRLAGS*QHAPCSAGSRHLHC
Trigger: GCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGGTGCGTGCTGCCAGCTGCCGGCCAGCCGGGATAGAGGAGATGCCACTGGCCCTCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR GCA 90 bp GCATCTCCTCTATCCCGGCTGGCCGGCAGCTGGCAGCACGCACCATaGTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCC +
Preference number: 1 (lower is better)
Translates to: ASPLSRLAGSWQHAP*SAGSRHLHCPSAES
Trigger: GGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGGTGCGTGCTGCCAGCTGCCGGCCAGCCGGGATAGAGGAGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CCA 90 bp GAAGAGACAGGCGTGGCCTATTTCCACACGCACATCCACGGAGGCTaGCCTGGAGGCCTTGAGGGGCTCACAGCCGGGGCACCAGGCAGG +
Preference number: 1 (lower is better)
Translates to: EETGVAYFHTHIHGG*PGGLEGLTAGAPGR
Trigger: CCTGCCTGGTGCCCCGGCTGTGAGCCCCTCAAGGCCTCCAGGCCAGCCTCCGTGGATGTGCGTGTGGAAATAGGCCACGCCTGTCTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR CCA 90 bp GGTGTTTCAGCCTGGTGCCTGAGGATAGGAGGGTCTGGGTCCCGGTaGTCGCTCTCCTCGCCTTCCAGCCCCGGAGCCCTTGAGCACGGA +
Preference number: 1 (lower is better)
Translates to: GVSAWCLRIGGSGSR*SLSSPSSPGALEHG
Trigger: TCCGTGCTCAAGGGCTCCGGGGCTGGAAGGCGAGGAGAGCGACCACCGGGACCCAGACCCTCCTATCCTCAGGCACCAGGCTGAAACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 90 bp TTGCCTGTGAGAGGCCTGGAGCCTGCCGGCCGTGGTGTTTCAGCCTaGTGCCTGAGGATAGGAGGGTCTGGGTCCCGGTGGTCGCTCTCC +
Preference number: 1 (lower is better)
Translates to: LPVRGLEPAGRGVSA*CLRIGGSGSRWSLS
Trigger: GGAGAGCGACCACCGGGACCCAGACCCTCCTATCCTCAGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCTCACAGGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 90 bp GAGCACGGAGGAGCCCCCGCCGCTGCCACGGAAGGAGTTTCTTCTTaGGGTTGCGGACAGCCCGGGAGTACAGCATGGCCCTCACTGCAC +
Preference number: 1 (lower is better)
Translates to: EHGGAPAAATEGVSS*GCGQPGSTAWPSLH
Trigger: GTGCAGTGAGGGCCATGCTGTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCCTCCGTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR GCA 90 bp CCACCACACATCACGCGCGACACGAGGATCCTGCAGAGCGGCCTCTaGAGAGAGCAAGGACAGCCTCGGTTAAGAGGGAGGGGCTGGGGG +
Preference number: 1 (lower is better)
Translates to: PPHITRDTRILQSGL*REQGQPRLRGRGWG
Trigger: CCCCCAGCCCCTCCCTCTTAACCGAGGCTGTCCTTGCTCTCTGCAGAGGCCGCTCTGCAGGATCCTCGTGTCGCGCGTGATGTGTGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR TCA 90 bp GCGGACAGCCCGGGAGTACAGCATGGCCCTCACTGCACAGTCTGCTaGGGTCGGCTTCTGGTCGGCTCCTCGCAAGTTCTCGCTCATCCG +
Preference number: 1 (lower is better)
Translates to: ADSPGVQHGPHCTVC*GRLLVGSSQVLAHP
Trigger: CGGATGAGCGAGAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGCAGACTGTGCAGTGAGGGCCATGCTGTACTCCCGGGCTGTCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 90 bp CCTGCTGGCTTGGGGGATGGGCCTGAGGCTTCTAAGCTGGGGTCCTaGGGAGAAGGTCCAACTGGGTCTGGCGGGCAGTCCTTGGCAGCA +
Preference number: 1 (lower is better)
Translates to: PAGLGDGPEASKLGS*GEGPTGSGGQSLAA
Trigger: TGCTGCCAAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAGGCCCATCCCCCAAGCCAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR GCA 90 bp TGGAATGGTCAGGGCGATGCTGGAGAGAGTGCGCTTGATCCACGCTaGAGGTGTGTGCGCCTCGCTCGGGTCAATGGGCTGAGCCCCGCT +
Preference number: 1 (lower is better)
Translates to: WNGQGDAGESALDPR*RCVRLARVNGLSPA
Trigger: AGCGGGGCTCAGCCCATTGACCCGAGCGAGGCGCACACACCTGCAGCGTGGATCAAGCGCACTCTCTCCAGCATCGCCCTGACCATTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR GCA 90 bp CCTGGAGGCCTTGAGGGGCTCACAGCCGGGGCACCAGGCAGGCCATaGGCATCTGCCCTTGGCCAGTGTGAGGTTTGCTCCTTCAGCAAA +
Preference number: 1 (lower is better)
Translates to: PGGLEGLTAGAPGRP*ASALGQCEVCSFSK
Trigger: TTTGCTGAAGGAGCAAACCTCACACTGGCCAAGGGCAGATGCGCATGGCCTGCCTGGTGCCCCGGCTGTGAGCCCCTCAAGGCCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR CCA 90 bp TGTCCACTCCTGCTGGCTTGGGGGATGGGCCTGAGGCTTCTAAGCTaGGGTCCTGAGGAGAAGGTCCAACTGGGTCTGGCGGGCAGTCCT +
Preference number: 1 (lower is better)
Translates to: CPLLLAWGMGLRLLS*GPEEKVQLGLAGSP
Trigger: AGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAGGCCCATCCCCCAAGCCAGCAGGAGTGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 90 bp TTGATCCACGCTGCAGGTGTGTGCGCCTCGCTCGGGTCAATGGGCTaGGCCCCGCTTGGAGCTCCATCCATTCACCTGACCCATGGCCAA +
Preference number: 1 (lower is better)
Translates to: LIHAAGVCASLGSMG*APLGAPSIHLTHGQ
Trigger: TTGGCCATGGGTCAGGTGAATGGATGGAGCTCCAAGCGGGGCTCAGCCCATTGACCCGAGCGAGGCGCACACACCTGCAGCGTGGATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CCA 90 bp GCCAAAGCTACAGAAGCCACTGGAAGCAAGCAGAGCCCCTGGGGGTaGTGGCACTGCAAGGTGACAGGGACCAGGCAGACAAGGAGCTGG +
Preference number: 1 (lower is better)
Translates to: AKATEATGSKQSPWG*WHCKVTGTRQTRSW
Trigger: CCAGCTCCTTGTCTGCCTGGTCCCTGTCACCTTGCAGTGCCACCACCCCCAGGGGCTCTGCTTGCTTCCAGTGGCTTCTGTAGCTTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR TCA 90 bp GTCCTTGGCAGCATCATTTCTGTCTGGCAGGGATGGTTTTGCCTGTaGGAGGCCTGGAGCCTGCCGGCCGTGGTGTTTCAGCCTGGTGCC +
Preference number: 1 (lower is better)
Translates to: VLGSIISVWQGWFCL*EAWSLPAVVFQPGA
Trigger: GGCACCAGGCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCTCACAGGCAAAACCATCCCTGCCAGACAGAAATGATGCTGCCAAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR GCA 90 bp GGGGGTGACCCTGGAACATGCTCTGCTGGCTCCCGACACCTTCACTaGCCCAGCGCTGAATCCACAGGAGAGGTGTCCTCTGAGAGTGTA +
Preference number: 1 (lower is better)
Translates to: GGDPGTCSAGSRHLH*PSAESTGEVSSESV
Trigger: TACACTCTCAGAGGACACCTCTCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGTTCCAGGGTCACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330854.15
3UTR GCA 90 bp AGCTGGCAGCACGCACCATGCTCTGCTGGCTCCCGACACCTTCACTaGCCCAGCGCTGAATCCACAGGAGAGGTGTCCTCTGAGAGTGTA +
Preference number: 1 (lower is better)
Translates to: SWQHAPCSAGSRHLH*PSAESTGEVSSESV
Trigger: TACACTCTCAGAGGACACCTCTCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGGTGCGTGCTGCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR GCA 90 bp TTTCTGTCTGGCAGGGATGGTTTTGCCTGTGAGAGGCCTGGAGCCTaGCGGCCGTGGTGTTTCAGCCTGGTGCCTGAGGATAGGAGGGTC +
Preference number: 1 (lower is better)
Translates to: FLSGRDGFACERPGA*RPWCFSLVPEDRRV
Trigger: GACCCTCCTATCCTCAGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCTCACAGGCAAAACCATCCCTGCCAGACAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 90 bp TCGGGTCAATGGGCTGAGCCCCGCTTGGAGCTCCATCCATTCACCTaGCCCATGGCCAACATGGAAGCTGTCGGAGGGGTCAGGAAAGGA +
Preference number: 1 (lower is better)
Translates to: SGQWAEPRLELHPFT*PMANMEAVGGVRKG
Trigger: TCCTTTCCTGACCCCTCCGACAGCTTCCATGTTGGCCATGGGTCAGGTGAATGGATGGAGCTCCAAGCGGGGCTCAGCCCATTGACCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR TCA 90 bp ACAAAGCACATGGAATGGTCAGGGCGATGCTGGAGAGAGTGCGCTTaGTCCACGCTGCAGGTGTGTGCGCCTCGCTCGGGTCAATGGGCT +
Preference number: 1 (lower is better)
Translates to: TKHMEWSGRCWRECA*STLQVCAPRSGQWA
Trigger: AGCCCATTGACCCGAGCGAGGCGCACACACCTGCAGCGTGGATCAAGCGCACTCTCTCCAGCATCGCCCTGACCATTCCATGTGCTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CCA 90 bp CTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGAGCTaGTTCCTCAGCACTCACAGGCTGAGGTGCCTTTCGGGGGCAGCG +
Preference number: 1 (lower is better)
Translates to: LESNGQSNWKISQRS*FLSTHRLRCLSGAA
Trigger: CGCTGCCCCCGAAAGGCACCTCAGCCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CCA 90 bp GAGTACAGCATGGCCCTCACTGCACAGTCTGCTGAGGTCGGCTTCTaGTCGGCTCCTCGCAAGTTCTCGCTCATCCGCTGCATTTCTGCC +
Preference number: 1 (lower is better)
Translates to: EYSMALTAQSAEVGF*SAPRKFSLIRCISA
Trigger: GGCAGAAATGCAGCGGATGAGCGAGAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGCAGACTGTGCAGTGAGGGCCATGCTGTACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 90 bp AGACCCTCACAAAGGGACACAGCCAACTGCCATCCTCTGTGGCAGTaGCTGTCACAGTCGCCCTTCCACTTGCATGATGGCAAGGCCCTC +
Preference number: 1 (lower is better)
Translates to: RPSQRDTANCHPLWQ*LSQSPFHLHDGKAL
Trigger: GAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACTGTGACAGCCACTGCCACAGAGGATGGCAGTTGGCTGTGTCCCTTTGTGAGGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR CCA 90 bp GAGAAGAGGTCTGAGGTGCTTCAGAGATGTCCACTCCTGCTGGCTTaGGGGATGGGCCTGAGGCTTCTAAGCTGGGGTCCTGAGGAGAAG +
Preference number: 1 (lower is better)
Translates to: EKRSEVLQRCPLLLA*GMGLRLLSWGPEEK
Trigger: CTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAGGCCCATCCCCCAAGCCAGCAGGAGTGGACATCTCTGAAGCACCTCAGACCTCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR GCA 90 bp ACTGCCATCCTCTGTGGCAGTGGCTGTCACAGTCGCCCTTCCACTTaGATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTTTGCTG +
Preference number: 1 (lower is better)
Translates to: TAILCGSGCHSRPST*MMARPSGLGTVRLL
Trigger: CAGCAAACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACTGTGACAGCCACTGCCACAGAGGATGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR GCA 90 bp AGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGGGGTaGCCAGAGGGCCCTGGTTACCTCGGAATGCCTTACCCAGCAGGA +
Preference number: 1 (lower is better)
Translates to: RNKEYSPSKSWLLRG*PEGPGYLGMPYPAG
Trigger: TCCTGCTGGGTAAGGCATTCCGAGGTAACCAGGGCCCTCTGGGCACCCCCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
3UTR GCA 90 bp ATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTaGCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCCCACG +
Preference number: 1 (lower is better)
Translates to: IILCRNTSNVSSLCS*PSAPNPSPSEGVPT
Trigger: CGTGGGAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593795.5
ENST00000597280.5
3UTR CCA 90 bp AGAGTCAGTTGTGCACCTGAGCCCAGGGCCTGGCATGCCAGGAACTaGGCATGGGCACAAACAGTCCATGAGATGCAGGTGTTTGGGACA +
Preference number: 1 (lower is better)
Translates to: RVSCAPEPRAWHARN*AWAQTVHEMQVFGT
Trigger: TGTCCCAAACACCTGCATCTCATGGACTGTTTGTGCCCATGCCCAGTTCCTGGCATGCCAGGCCCTGGGCTCAGGTGCACAACTGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
3UTR CCA 90 bp TGGGGTCCTGAGGAGAAGGTCCAACTGGGTCTGGCGGGCAGTCCTTaGCAGCATCATTTCTGTCTGGCAGGGATGGTTTTGCCTGTGAGA +
Preference number: 1 (lower is better)
Translates to: WGPEEKVQLGLAGSP*QHHFCLAGMVLPVR
Trigger: TCTCACAGGCAAAACCATCCCTGCCAGACAGAAATGATGCTGCCAAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCTCAGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 90 bp TTGCTGAATCGGGCAGGGGACTGCAATGGGACAAGAGACCCGTTCTaGGAACAGGCTTCAGCTCTGCTGTACTGGTGGGTTCTCGCCTCT +
Preference number: 1 (lower is better)
Translates to: LLNRAGDCNGTRDPF*EQASALLYWWVLAS
Trigger: AGAGGCGAGAACCCACCAGTACAGCAGAGCTGAAGCCTGTTCCCAGAACGGGTCTCTTGTCCCATTGCAGTCCCCTGCCCGATTCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR TCA 90 bp TCGATGACACGTTTCACAAGCTGGTCGATGGTGCCCACTACCCTGTaGTCTGCTCGCTGGGGGACAGCATCACTCAGACTACTTGGAGCC +
Preference number: 1 (lower is better)
Translates to: SMTRFTSWSMVPTTL*SARWGTASLRLLGA
Trigger: GGCTCCAAGTAGTCTGAGTGATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCACCATCGACCAGCTTGTGAAACGTGTCATCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 90 bp ACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGGTaGGGGGCGGTCAGTGGCCACACGCCACAGATTCCTAAAGCATTT +
Preference number: 1 (lower is better)
Translates to: THRTISAQTWRSGRR*GAVSGHTPQIPKAF
Trigger: AAATGCTTTAGGAATCTGTGGCGTGTGGCCACTGACCGCCCCCCACCTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
3UTR CCA 90 bp AACCAGCTCCACTCCAGGCCCCCACAGGCTGGTTCGTTCGAGGGTTaGGTTATAAACCCAAACTCCATCCTCCATGCTGGCACCTCTACT +
Preference number: 1 (lower is better)
Translates to: NQLHSRPPQAGSFEG*VINPNSILHAGTST
Trigger: AGTAGAGGTGCCAGCATGGAGGATGGAGTTTGGGTTTATAACCCAACCCTCGAACGAACCAGCCTGTGGGGGCCTGGAGTGGAGCTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CCA 90 bp GCTGTCATCTGTGAGAGAAAACTTGAGCAAGAGAAGAGACAGGCGTaGCCTATTTCCACACGCACATCCACGGAGGCTGGCCTGGAGGCC +
Preference number: 1 (lower is better)
Translates to: AVICERKLEQEKRQA*PISTRTSTEAGLEA
Trigger: GGCCTCCAGGCCAGCCTCCGTGGATGTGCGTGTGGAAATAGGCCACGCCTGTCTCTTCTCTTGCTCAAGTTTTCTCTCACAGATGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR CCA 90 bp ATTTTCTCCTCCTCTCGCATCGGCTCTGGTTCGGCTTTCTTAACCTaGAGGGGACATCCGCTGCTGACTAGCCAGGCCTTCAGGTGGTCT +
Preference number: 1 (lower is better)
Translates to: IFSSSRIGSGSAFLT*RGHPLLTSQAFRWS
Trigger: AGACCACCTGAAGGCCTGGCTAGTCAGCAGCGGATGTCCCCTCCAGGTTAAGAAAGCCGAACCAGAGCCGATGCGAGAGGAGGAGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR GCA 90 bp ATCTGCATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTaGTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTT +
Preference number: 1 (lower is better)
Translates to: ICIILCRNTSNVSSL*SCPSAPNPSPSEGV
Trigger: AACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
3UTR CCA 90 bp GGAACAGGCTTCAGCTCTGCTGTACTGGTGGGTTCTCGCCTCTTTTaGCTCCTGGATGAGACACACTCTCTTGGGAGCTGGAATCATGCC +
Preference number: 1 (lower is better)
Translates to: GTGFSSAVLVGSRLF*LLDETHSLGSWNHA
Trigger: GGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGAGGCGAGAACCCACCAGTACAGCAGAGCTGAAGCCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR TCA 90 bp ATTGTCTTCATGTCAATGTCAGCAGATGGGCAGGGAGAAGAGGTCTaGGGTGCTTCAGAGATGTCCACTCCTGCTGGCTTGGGGGATGGG +
Preference number: 1 (lower is better)
Translates to: IVFMSMSADGQGEEV*GASEMSTPAGLGDG
Trigger: CCCATCCCCCAAGCCAGCAGGAGTGGACATCTCTGAAGCACCTCAGACCTCTTCTCCCTGCCCATCTGCTGACATTGACATGAAGACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 90 bp CTCTCTTGGGAGCTGGAATCATGCCAACCTTCAATGACTTGCTGCTaGTCCTCTTCCGAGGGAAGCAGGTACCTGAGGAGGCCTGTGACA +
Preference number: 1 (lower is better)
Translates to: LSWELESCQPSMTCC*SSSEGSRYLRRPVT
Trigger: TGTCACAGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR CCA 90 bp CTTCAACGATCCTGCTTCACAAGGAAGGATGAGTGGAGAATTGAGTaGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGGGG +
Preference number: 1 (lower is better)
Translates to: LQRSCFTRKDEWRIE*SYTQQSAGESGERG
Trigger: CCCCCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCACTCATCCTTCCTTGTGAAGCAGGATCGTTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR CCA 90 bp GCTTCAGCTCTGCTGTACTGGTGGGTTCTCGCCTCTTTTGGCTCCTaGATGAGACACACTCTCTTGGGAGCTGGAATCATGCCAACCTTC +
Preference number: 1 (lower is better)
Translates to: ASALLYWWVLASFGS*MRHTLLGAGIMPTF
Trigger: GAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGAGGCGAGAACCCACCAGTACAGCAGAGCTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR CCA 90 bp CTTGGAAAACAGTCAGTGGTTGCTGAATCGGGCAGGGGACTGCAATaGGACAAGAGACCCGTTCTGGGAACAGGCTTCAGCTCTGCTGTA +
Preference number: 1 (lower is better)
Translates to: LGKQSVVAESGRGLQ*DKRPVLGTGFSSAV
Trigger: TACAGCAGAGCTGAAGCCTGTTCCCAGAACGGGTCTCTTGTCCCATTGCAGTCCCCTGCCCGATTCAGCAACCACTGACTGTTTTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR TCA 90 bp GCTCGCTGGGGGACAGCATCACTCAGACTACTTGGAGCCTTGGCCTaGATTTCAGGTTTCGTAGGAGGAATCATTTTCTCCTCCTCTCGC +
Preference number: 1 (lower is better)
Translates to: ARWGTASLRLLGALA*ISGFVGGIIFSSSR
Trigger: GCGAGAGGAGGAGAAAATGATTCCTCCTACGAAACCTGAAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGATGCTGTCCCCCAGCGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 90 bp CAGCTCTGCTGTACTGGTGGGTTCTCGCCTCTTTTGGCTCCTGGATaGGACACACTCTCTTGGGAGCTGGAATCATGCCAACCTTCAATG +
Preference number: 1 (lower is better)
Translates to: QLCCTGGFSPLLAPG*DTLSWELESCQPSM
Trigger: CATTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGAGGCGAGAACCCACCAGTACAGCAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR GCA 90 bp CCAAACTCCATCCTCCATGCTGGCACCTCTACTGCCATAAAGATCTaGCAGTTGCCAAAGCTACAGAAGCCACTGGAAGCAAGCAGAGCC +
Preference number: 1 (lower is better)
Translates to: PNSILHAGTSTAIKI*QLPKLQKPLEASRA
Trigger: GGCTCTGCTTGCTTCCAGTGGCTTCTGTAGCTTTGGCAACTGGCAGATCTTTATGGCAGTAGAGGTGCCAGCATGGAGGATGGAGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CCA 90 bp ACTGTGCCTGGCCCAAAGCCAGGATTTCTTTACAGCCAATACAAGTaGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTAGCCACTGCT +
Preference number: 1 (lower is better)
Translates to: TVPGPKPGFLYSQYK*HFPLSSVADALATA
Trigger: AGCAGTGGCTAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTAAAGAAATCCTGGCTTTGGGCCAGGCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR TCA 90 bp TCTGAGAGTGTAGGGGGCTTTCTAGGTTCAAGGAGATGTGCCCTTTaGCCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGG +
Preference number: 1 (lower is better)
Translates to: SESVGGFLGSRRCAL*PLPRTHRTISAQTW
Trigger: CCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAAAGGGCACATCTCCTTGAACCTAGAAAGCCCCCTACACTCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
3UTR TCA 90 bp GACCCTGGAATTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACAT +
Preference number: 1 (lower is better)
Translates to: DPGIGHWLQADPGQG*CFKGNCCFKAYLSH
Trigger: ATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAATTCCAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594773.5
3UTR TCA 90 bp CAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACAT +
Preference number: 1 (lower is better)
Translates to: QTVLGHWLQADPGQG*CFKGNCCFKAYLSH
Trigger: ATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CCA 90 bp CTAGCCAGGCCTTCAGGTGGTCTATGTACTCTCGCCCAAACAAAGTaGAGTCTTCGAAGTTTGGAAACGCAGCAGGTGAGGGAGCTATAT +
Preference number: 1 (lower is better)
Translates to: LARPSGGLCTLAQTK*SLRSLETQQVRELY
Trigger: ATATAGCTCCCTCACCTGCTGCGTTTCCAAACTTCGAAGACTCCACTTTGTTTGGGCGAGAGTACATAGACCACCTGAAGGCCTGGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 90 bp TTCTGCAGCATCTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTaGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGGA +
Preference number: 1 (lower is better)
Translates to: FCSIWKPRFLSVSFC*AKSKSLGFFFLDMG
Trigger: TCCCATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAGATGCTGCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597280.5
ENST00000598240.1
ENST00000600239.5
3UTR GCA 90 bp TTCGATCTCTGGTCCCACCTGAGCAACAAATCTAGCCAGTTTCTCTaGAGTCTCCATTGTCTTCATGTCAATGTCAGCAGATGGGCAGGG +
Preference number: 1 (lower is better)
Translates to: FDLWSHLSNKSSQFL*SLHCLHVNVSRWAG
Trigger: CCCTGCCCATCTGCTGACATTGACATGAAGACAATGGAGACTGCAGAGAAACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGATCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 90 bp CCATCTGTGATCGTTTCCACATCACGTTTGCTAACAGAGCACTTCTaGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGAGCT +
Preference number: 1 (lower is better)
Translates to: PSVIVSTSRLLTEHF*RAMASPTGKSARGA
Trigger: AGCTCCTCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAGCAAACGTGATGTGGAAACGATCACAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR GCA 90 bp TTGGGTTATAAACCCAAACTCCATCCTCCATGCTGGCACCTCTACTaGCATAAAGATCTGCCAGTTGCCAAAGCTACAGAAGCCACTGGA +
Preference number: 1 (lower is better)
Translates to: LGYKPKLHPPCWHLY*HKDLPVAKATEATG
Trigger: TCCAGTGGCTTCTGTAGCTTTGGCAACTGGCAGATCTTTATGGCAGTAGAGGTGCCAGCATGGAGGATGGAGTTTGGGTTTATAACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CCA 90 bp TCTGGACTAGGAACAGTCCGTTTGCTGGTCATGTTATGTGGTAGGTaGCTGTCATCTGTGAGAGAAAACTTGAGCAAGAGAAGAGACAGG +
Preference number: 1 (lower is better)
Translates to: SGLGTVRLLVMLCGR*LSSVRENLSKRRDR
Trigger: CCTGTCTCTTCTCTTGCTCAAGTTTTCTCTCACAGATGACAGCCACCTACCACATAACATGACCAGCAAACGGACTGTTCCTAGTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR CCA 90 bp GTCAGGGTTATCGGTGCTGTTTTCTATGCTGAATTGTTCGATCTCTaGTCCCACCTGAGCAACAAATCTAGCCAGTTTCTCTGCAGTCTC +
Preference number: 1 (lower is better)
Translates to: VRVIGAVFYAELFDL*SHLSNKSSQFLCSL
Trigger: GAGACTGCAGAGAAACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTCAGCATAGAAAACAGCACCGATAACCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 90 bp TCGGTGCTGTTTTCTATGCTGAATTGTTCGATCTCTGGTCCCACCTaGGCAACAAATCTAGCCAGTTTCTCTGCAGTCTCCATTGTCTTC +
Preference number: 1 (lower is better)
Translates to: SVLFSMLNCSISGPT*ATNLASFSAVSIVF
Trigger: GAAGACAATGGAGACTGCAGAGAAACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTCAGCATAGAAAACAGCACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 90 bp TTCATCAACTCAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTaGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTCCC +
Preference number: 1 (lower is better)
Translates to: FINSSMATVQRASEL*YPSADLVITGNLSP
Trigger: GGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTGAGTTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CCA 90 bp CCATACTTAAAACTTCAACGATCCTGCTTCACAAGGAAGGATGAGTaGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCT +
Preference number: 1 (lower is better)
Translates to: PYLKLQRSCFTRKDE*RIEWSYTQQSAGES
Trigger: AGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCACTCATCCTTCCTTGTGAAGCAGGATCGTTGAAGTTTTAAGTATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR TCA 90 bp CCGTGGTGTCACCACCACCAGTGTGAAGGTTGTGCGGAGATGACGTaGAACAAATTGATGGACATAGTTCAAACACTTTCTTTCGATAGA +
Preference number: 1 (lower is better)
Translates to: PWCHHHQCEGCAEMT*NKLMDIVQTLSFDR
Trigger: TCTATCGAAAGAAAGTGTTTGAACTATGTCCATCAATTTGTTTCACGTCATCTCCGCACAACCTTCACACTGGTGGTGGTGACACCACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR GCA 90 bp TCAGTGGTTTTGATCTATTTGTTGGCCCGCTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGC +
Preference number: 1 (lower is better)
Translates to: SVVLIYLLARLCLYI*IILCRNTSNVSSLC
Trigger: GCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGATCAAAACCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
3UTR GCA 90 bp CTTCTGGTCGGCTCCTCGCAAGTTCTCGCTCATCCGCTGCATTTCTaGCAACTTCAGCTTGTAATATTTATACTCCAGACTATTTTCATC +
Preference number: 1 (lower is better)
Translates to: LLVGSSQVLAHPLHF*QLQLVIFILQTIFI
Trigger: GATGAAAATAGTCTGGAGTATAAATATTACAAGCTGAAGTTGGCAGAAATGCAGCGGATGAGCGAGAACTTGCGAGGAGCCGACCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 90 bp TTTATCAAGGACCAAAAACACTACAATTCTCTAAGTGATTTCCAGTaGTGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGA +
Preference number: 1 (lower is better)
Translates to: FIKDQKHYNSLSDFQ*WKQARDSKAPRVAR
Trigger: TCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCACTTAGAGAATTGTAGTGTTTTTGGTCCTTGATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
3UTR CCA 90 bp GGTTTACAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTaGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCATCTGTT +
Preference number: 1 (lower is better)
Translates to: GLQPPSLCNCSLLTL*ILKRHVNLGPISSV
Trigger: AACAGATGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTGTAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR TCA 90 bp TTGCAGGCCATAAGCAAAGGTGTGACACTCTTCAGAAGCCGGTCTTaGAGTCTCATTATGTACTTGTCAAAAGGCTTTATGATTTCAAAA +
Preference number: 1 (lower is better)
Translates to: LQAISKGVTLFRSRS*SLIMYLSKGFMISK
Trigger: TTTTGAAATCATAAAGCCTTTTGACAAGTACATAATGAGACTTCAAGACCGGCTTCTGAAGAGTGTCACACCTTTGCTTATGGCCTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CAA 90 bp CTGGGTCCCGGTGGTCGCTCTCCTCGCCTTCCAGCCCCGGAGCCCTaGAGCACGGAGGAGCCCCCGCCGCTGCCACGGAAGGAGTTTCTT +
Preference number: 2 (lower is better)
Translates to: LGPGGRSPRLPAPEP*STEEPPPLPRKEFL
Trigger: AAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCCTCCGTGCTCAAGGGCTCCGGGGCTGGAAGGCGAGGAGAGCGACCACCGGGACCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CCA 90 bp CTGCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCCTGTGTTCGGGACCCTaGCTGGCCCGGCTATGGGTT +
Preference number: 2 (lower is better)
Translates to: LPAAYTLTGSLMPFPREPLCSGP*LARLWV
Trigger: AACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAG...GGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR GCA 90 bp CTGCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCAGCTGGGATTACAGGTaGCCGCTACCACGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: LPAAYTLTGSLMPFPREPSWDYR*PLPRLA
Trigger: AGCCAGGCGTGGTAGCGGGCACCTGTAATCCCAGCT...GGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CCA 90 bp AGCTGGCAGCACGCACCATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCACCGTACTTGGGCACTaGCTCCAGGCCGATCCAGGG +
Preference number: 2 (lower is better)
Translates to: SWQHAPCSAGSRHLHCPSTVLGH*LQADPG
Trigger: CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGT...GCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGGTGCGTGCTGCCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR-3UTR CCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGGTTCGGGACCCTGGCTaGCCCGGCTATGGGTTCCCG +
Preference number: 2 (lower is better)
Translates to: APRVAREHFQMPVVLSGVVRDPG*PGYGFP
Trigger: CGGGAACCCATAGCCGGGCCAGCCAGGGTCCCGAAC...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594773.5
3UTR CAA 90 bp CGGAGGAGCCCCCGCCGCTGCCACGGAAGGAGTTTCTTCTTGAGGTaGCGGACAGCCCGGGAGTACAGCATGGCCCTCACTGCACAGTCT +
Preference number: 2 (lower is better)
Translates to: RRSPRRCHGRSFFLR*RTAREYSMALTAQS
Trigger: AGACTGTGCAGTGAGGGCCATGCTGTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR TCA 90 bp CTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTCAGCCCCGGAGCCCTTaGGCACGGAGGAGCCCCCGC +
Preference number: 2 (lower is better)
Translates to: LEAQVLIGQLLLGEVQVLQPRSP*ARRSPR
Trigger: GCGGGGGCTCCTCCGTGCTCAAGGGCTCCGGGGCTG...AAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CCA 90 bp AGACAGGCGTGGCCTATTTCCACACGCACATCCACGGAGGCTGGCCTGGAGGCCACCGTACTTGGGCACTaGCTCCAGGCCGATCCAGGG +
Preference number: 2 (lower is better)
Translates to: RQAWPISTRTSTEAGLEATVLGH*LQADPG
Trigger: CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGT...GGCCTCCAGGCCAGCCTCCGTGGATGTGCGTGTGGAAATAGGCCACGCCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp GATGCTGGAGAGAGTGCGCTTGATCCACGCTGCAGGTGTGTGCGCCTCGCTCGGCACGCAGCAGAGTGCTaGGGAATCTGGAGAGCGGGG +
Preference number: 2 (lower is better)
Translates to: DAGESALDPRCRCVRLARHAAEC*GIWRAG
Trigger: CCCCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTG...CCGAGCGAGGCGCACACACCTGCAGCGTGGATCAAGCGCACTCTCTCCAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR-3UTR TCA 90 bp GGTGCTCCAGCCAGGTCGTCCTCGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGGCCTGCTGGAGGTTATaGTCGGGGTTTAATAAACTT +
Preference number: 2 (lower is better)
Translates to: GAPARSSSAASPGRPSAGACWRL*SGFNKL
Trigger: AAGTTTATTAAACCCCGATCATAACCTCCAGCAGGC...CCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGGACGACCTGGCTGGAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR CCA 90 bp GTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGACCGTACTTGGGCACTaGCTCCAGGCCGATCCAGGG +
Preference number: 2 (lower is better)
Translates to: VSSLCSCPSAPNPSPSEGTVLGH*LQADPG
Trigger: CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGT...CCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593795.5
ENST00000597280.5
ENST00000600239.5
3UTR-3UTR CCA 90 bp TGGCAGTGGCTGTCACAGTCGCCCTTCCACTTGCATGATGGCAAGGCCCTCTGGCACATCCACGGAGGCTaGCCTGGAGGCCTTGAGGGG +
Preference number: 2 (lower is better)
Translates to: WQWLSQSPFHLHDGKALWHIHGG*PGGLEG
Trigger: CCCCTCAAGGCCTCCAGGCCAGCCTCCGTGGATGTG...CCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACTGTGACAGCCACTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR CAA 90 bp GCGGGCAGTCCTTGGCAGCATCATTTCTGTCTGGCAGGGATGGTTTaGCCTGTGAGAGGCCTGGAGCCTGCCGGCCGTGGTGTTTCAGCC +
Preference number: 2 (lower is better)
Translates to: AGSPWQHHFCLAGMV*PVRGLEPAGRGVSA
Trigger: GGCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCTCACAGGCAAAACCATCCCTGCCAGACAGAAATGATGCTGCCAAGGACTGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR TCA 90 bp AGCTGGCAGCACGCACCATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCCTGGTCTCAAACTCCTaGCCTCAGGTGATCCATCCG +
Preference number: 2 (lower is better)
Translates to: SWQHAPCSAGSRHLHCPSLVSNS*PQVIHP
Trigger: CGGATGGATCACCTGAGGTCAGGAGTTTGAGACCAG...GCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGGTGCGTGCTGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR-3UTR GCA 90 bp CTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCTGGCTTTTGAGGGGGTaGCCAGAGGGCCCTGGTTAC +
Preference number: 2 (lower is better)
Translates to: LLCAPARQHPTLPLPRGFWLLRG*PEGPGY
Trigger: GTAACCAGGGCCCTCTGGGCACCCCCTCAAAAGCCA...GAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
3UTR-3UTR GCA 90 bp CCTGAGGAGAAGGTCCAACTGGGTCTGGCGGGCAGTCCTTGGCAGCATCATTTCGAGAGGCCTGGAGCCTaGCGGCCGTGGTGTTTCAGC +
Preference number: 2 (lower is better)
Translates to: PEEKVQLGLAGSPWQHHFERPGA*RPWCFS
Trigger: GCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCTC...GAAATGATGCTGCCAAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CCA 90 bp CTGCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCTCTTCTTTTTGGACATaGGACGACCCCGAGGCCTGT +
Preference number: 2 (lower is better)
Translates to: LPAAYTLTGSLMPFPREPSSFWT*DDPEAC
Trigger: ACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGA...GGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR CAA 90 bp GACAAAGCACATGGAATGGTCAGGGCGATGCTGGAGAGAGTGCGCTaGATCCACGCTGCAGGTGTGTGCGCCTCGCTCGGGTCAATGGGC +
Preference number: 2 (lower is better)
Translates to: DKAHGMVRAMLERVR*IHAAGVCASLGSMG
Trigger: GCCCATTGACCCGAGCGAGGCGCACACACCTGCAGCGTGGATCAAGCGCACTCTCTCCAGCATCGCCCTGACCATTCCATGTGCTTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR-3UTR TCA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCTGGCCTGGAGGCCTTaGGGGGCTCACAGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGLAWRP*GAHSRG
Trigger: GCCCCGGCTGTGAGCCCCTCAAGGCCTCCAGGCCAG...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCGAGAGCACTTCCAGATaGCTGTTGTCCTCTCGGGGG +
Preference number: 2 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTESTSR*LLSSRG
Trigger: CCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTC...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
3UTR-3UTR CCA 90 bp ATCCTCTTCCGAGGGAAGCAGGTACCTGAGGAGGCCTGTGACAAGGCAGGTGCTACCGTACTTGGGCACTaGCTCCAGGCCGATCCAGGG +
Preference number: 2 (lower is better)
Translates to: ILFRGKQVPEEACDKAGATVLGH*LQADPG
Trigger: CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGT...AGCACCTGCCTTGTCACAGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CCA 90 bp GCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTGTTCGGGACCCTGGCTaGCCCGGCTATGGGTTCCCG +
Preference number: 2 (lower is better)
Translates to: AQVLIGQLLLGEVQVLGFVRDPG*PGYGFP
Trigger: CGGGAACCCATAGCCGGGCCAGCCAGGGTCCCGAAC...AAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR CCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTCCTGAGCCCAGGGCCTaGCATGCCAGGAACTGGGCA +
Preference number: 2 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIAPEPRA*HARNWA
Trigger: TGCCCAGTTCCTGGCATGCCAGGCCCTGGGCTCAGG...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
3UTR-3UTR CCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGGGAACAAACCGTACTTaGGCACTGGCTCCAGGCCGA +
Preference number: 2 (lower is better)
Translates to: APRVAREHFQMPVVLSGVGTNRT*ALAPGR
Trigger: TCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGTTCC...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593795.5
3UTR-3UTR TCA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTCTGGCCTGGAGGCCTTaGGGGGCTCACAGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCLAWRP*GAHSRG
Trigger: GCCCCGGCTGTGAGCCCCTCAAGGCCTCCAGGCCAG...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp CTGGAACATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCAGAGAGCACTTCCAGATaGCTGTTGTCCTCTCGGGGG +
Preference number: 2 (lower is better)
Translates to: LEHALLAPDTFTAPALNPESTSR*LLSSRG
Trigger: CCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTC...TGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330854.15
3UTR-3UTR GCA 90 bp TTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCACTCACAGGCTGAGGTaGCTTTCGGGGGCAGCGCCA +
Preference number: 2 (lower is better)
Translates to: FHVHTKPYLGTGSRPIQGTHRLR*LSGAAP
Trigger: TGGCGCTGCCCCCGAAAGGCACCTCAGCCTGTGAGT...GCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp AGACAGGCGTGGCCTATTTCCACACGCACATCCACGGAGGCTGGCCTGGAGGCCGGCCAGTGTGAGGTTTaGTCCTTCAGCAAACCTGGA +
Preference number: 2 (lower is better)
Translates to: RQAWPISTRTSTEAGLEAGQCEV*SFSKPG
Trigger: TCCAGGTTTGCTGAAGGAGCAAACCTCACACTGGCC...GGCCTCCAGGCCAGCCTCCGTGGATGTGCGTGTGGAAATAGGCCACGCCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp GATGCTGGAGAGAGTGCGCTTGATCCACGCTGCAGGTGTGTGCGCCTCGCTCGGAAACTCCATCCTCCATaGTGGCACCTCTACTGCCAT +
Preference number: 2 (lower is better)
Translates to: DAGESALDPRCRCVRLARKLHPP*WHLYCH
Trigger: ATGGCAGTAGAGGTGCCAGCATGGAGGATGGAGTTT...CCGAGCGAGGCGCACACACCTGCAGCGTGGATCAAGCGCACTCTCTCCAGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR-3UTR CCA 90 bp GCCAGTCCAACTGGAAAATCAGCCAGAGGAGCTGGTTCCTCAGCACTCACAGGCGAGTGCTGGGGAATCTaGAGAGCGGGGGCGATCACA +
Preference number: 2 (lower is better)
Translates to: ASPTGKSARGAGSSALTGECWGI*RAGAIT
Trigger: TGTGATCGCCCCCGCTCTCCAGATTCCCCAGCACTC...GCCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGATTTTCCAGTTGGACTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR CCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTTGGCTGGCCCGGCTATaGGTTCCCGGGAATGGGAAA +
Preference number: 2 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIAWLARL*VPGNGK
Trigger: TTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCA...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
3UTR-3UTR CCA 90 bp GGCCAAGGAAAATGTCTGTCCCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTGTTCGGGACCCTGGCTaGCCCGGCTATGGGTTCCCG +
Preference number: 2 (lower is better)
Translates to: GQGKCLSQKGQRLPAERVVRDPG*PGYGFP
Trigger: CGGGAACCCATAGCCGGGCCAGCCAGGGTCCCGAAC...AACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACATTTTCCTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CCA 90 bp ATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCTGTGTTCGGGACCCTaGCTGGCCCGGCTATGGGTT +
Preference number: 2 (lower is better)
Translates to: IECVFFVLLPVSTQPFPFLCSGP*LARLWV
Trigger: AACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAG...GAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
3UTR-3UTR CCA 90 bp GGTGCCCACTACCCTGTGATCTGCTCGCTGGGGGACAGCATCACTCAGACTACTTCACCCTCGAAGAGCTaGCTTTTGAGGGGGTGCCCA +
Preference number: 2 (lower is better)
Translates to: GAHYPVICSLGDSITQTTSPSKS*LLRGCP
Trigger: TGGGCACCCCCTCAAAAGCCAGCTCTTCGAGGGTGA...AGTAGTCTGAGTGATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CCA 90 bp GGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTGCCAGGAACTGGGCATaGGCACAAACAGTCCATGAG +
Preference number: 2 (lower is better)
Translates to: GWPGYGFPGMGKQFQTETARNWA*AQTVHE
Trigger: CTCATGGACTGTTTGTGCCCATGCCCAGTTCCTGGC...AGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
3UTR-3UTR CCA 90 bp AAGCTGGTCGATGGTGCCCACTACCCTGTGATCTGCTCGCTGGGGGACAGCATCAGCCAGGCCTTCAGGTaGTCTATGTACTCTCGCCCA +
Preference number: 2 (lower is better)
Translates to: KLVDGAHYPVICSLGDSISQAFR*SMYSRP
Trigger: TGGGCGAGAGTACATAGACCACCTGAAGGCCTGGCT...GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCACCATCGACCAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR TCA 90 bp GCCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACATCAGCACTCACAGGCTaGGGTGCCTTTCGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: ASETSAPETAETFVFMYTSALTG*GAFRGQ
Trigger: CTGCCCCCGAAAGGCACCTCAGCCTGTGAGTGCTGA...TGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp TGCCTTTCGGGGGCAGCGCCACCTTCTGAAGGGGAACCAAGACAGATTTGGAGGTGCCCTTGGCCAGTGTaGGGTTTGCTCCTTCAGCAA +
Preference number: 2 (lower is better)
Translates to: CLSGAAPPSEGEPRQIWRCPWPV*GLLLQQ
Trigger: TTGCTGAAGGAGCAAACCTCACACTGGCCAAGGGCA...CCTCCAAATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCCCCCGAAAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGCAAATGTGGCCAAAATaGCCAGGGCCAACAAGCTGG +
Preference number: 2 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLQMWPK*PGPTSW
Trigger: CCAGCTTGTTGGCCCTGGTCATTTTGGCCACATTTG...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594773.5
3UTR-3UTR TCA 90 bp GAGGGCCCTGGTTACCTCGGAATGCCTTACCCAGCAGGAACTAAGCTCAGTATTGTGCCCACTACCCTGTaGTCTGCTCGCTGGGGGACA +
Preference number: 2 (lower is better)
Translates to: EGPGYLGMPYPAGTKLSIVPTTL*SARWGT
Trigger: TGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCAC...AATACTGAGCTTAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAGGGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR GCA 90 bp AGCTGGCAGCACGCACCATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCCATACGTGCGAAAAGTaGAGAGTCTCAGAGGGTTTA +
Preference number: 2 (lower is better)
Translates to: SWQHAPCSAGSRHLHCPSHTCEK*RVSEGL
Trigger: TAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG...GCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGGTGCGTGCTGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR-3UTR GCA 90 bp AAGGAGTTTCTTCTTGAGGTTGCGGACAGCCCGGGAGTACAGCATGGCCCTCACCACTACCCTGTGATCTaGTCGCTGGGGGACAGCATC +
Preference number: 2 (lower is better)
Translates to: KEFLLEVADSPGVQHGPHHYPVI*SLGDSI
Trigger: GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTG...GTGAGGGCCATGCTGTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGTAAAGCACCCAGAGTaGCGAGAGAGCACTTCCAGA +
Preference number: 2 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLVKHPE*RESTSR
Trigger: TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
3UTR-3UTR CCA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAAGTAAAGCACCCAGAGTaGCGAGAGAGCACTTCCAGA +
Preference number: 2 (lower is better)
Translates to: VAREHFQMPVVLSGVTLEVKHPE*RESTSR
Trigger: TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
3UTR-3UTR CCA 90 bp ATCCTCTTCCGAGGGAAGCAGGTACCTGAGGAGGCCTGTGACAAGGCAGGTGCTATGGGTTCCCGGGAATaGGAAAGCAGTTCCAGACGG +
Preference number: 2 (lower is better)
Translates to: ILFRGKQVPEEACDKAGAMGSRE*ESSSRR
Trigger: CCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT...AGCACCTGCCTTGTCACAGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR CAA 90 bp AAACCAGCTCCACTCCAGGCCCCCACAGGCTGGTTCGTTCGAGGGTaGGGTTATAAACCCAAACTCCATCCTCCATGCTGGCACCTCTAC +
Preference number: 2 (lower is better)
Translates to: KPAPLQAPTGWFVRG*GYKPKLHPPCWHLY
Trigger: GTAGAGGTGCCAGCATGGAGGATGGAGTTTGGGTTTATAACCCAACCCTCGAACGAACCAGCCTGTGGGGGCCTGGAGTGGAGCTGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CAA 90 bp AACTGCCATCCTCTGTGGCAGTGGCTGTCACAGTCGCCCTTCCACTaGCATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTTTGCT +
Preference number: 2 (lower is better)
Translates to: NCHPLWQWLSQSPFH*HDGKALWTRNSPFA
Trigger: AGCAAACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACTGTGACAGCCACTGCCACAGAGGATGGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp CGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACACTGCTTCCCCTTCCATaGGGTCCACGGGGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: RSASAGRSPSPWVSSFWTLLPLP*GPRGSP
Trigger: AGGAGAGCCCCGTGGACCTCATGGAAGGGGAAGCAG...TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR TCA 90 bp TACAGCCAATACAAGTGGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTAGCCAAGCCATCTTGGCTGTaGAGGAGCCAAGCGGCAGGC +
Preference number: 2 (lower is better)
Translates to: YSQYKWHFPLSSVADALAKPSWL*RSQAAG
Trigger: GCCTGCCGCTTGGCTCCTTCACAGCCAAGATGGCTT...GGCTAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR GCA 90 bp GGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAGAGAGCACTTCCAGATaGCTGTTGTCCTCTCGGGGG +
Preference number: 2 (lower is better)
Translates to: GSRPIQGRDDVLRAIAASESTSR*LLSSRG
Trigger: CCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTC...TGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
3UTR-3UTR CCA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGACACCAAACCGTACTTaGGCACTGGCTCCAGGCCGA +
Preference number: 2 (lower is better)
Translates to: WRIEWSYTQQSAGESGERTPNRT*ALAPGR
Trigger: TCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR CAA 90 bp TCCATCCTCCATGCTGGCACCTCTACTGCCATAAAGATCTGCCAGTaGCCAAAGCTACAGAAGCCACTGGAAGCAAGCAGAGCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: SILHAGTSTAIKICQ*PKLQKPLEASRAPG
Trigger: CCCAGGGGCTCTGCTTGCTTCCAGTGGCTTCTGTAGCTTTGGCAACTGGCAGATCTTTATGGCAGTAGAGGTGCCAGCATGGAGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CAA 90 bp TACATCTGCATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTaGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGG +
Preference number: 2 (lower is better)
Translates to: YICIILCRNTSNVSS*CSCPSAPNPSPSEG
Trigger: CCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATGCAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
3UTR-3UTR TCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTAAGTGATTTCCAGTaGTGGAAACAAGCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTLSDFQ*WKQARD
Trigger: GTCTCTGGCTTGTTTCCATCACTGGAAATCACTTAG...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
3UTR-3UTR TCA 90 bp TGCCTTTCGGGGGCAGCGCCACCTTCTGAAGGGGAACCAAGACAGATTTGGAGGGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGC +
Preference number: 2 (lower is better)
Translates to: CLSGAAPPSEGEPRQIWRDPGQG*CFKGNC
Trigger: GCAATTGCCCTTAAAACATCATCCCTGCCCTGGATC...CCTCCAAATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCCCCCGAAAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp CGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCGGCAGCGCCACCTTCTaGAGGGGAACCAAGACAGAT +
Preference number: 2 (lower is better)
Translates to: RCHTCEKCRVSEGLQPPSGSATF*RGTKTD
Trigger: ATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCC...GGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp GCGACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGTTGTCCTCTCGGGGGTaGCCCTGGAATTGGGCACTG +
Preference number: 2 (lower is better)
Translates to: ATHSRNKEYSPSKSWLLRLSSRG*PWNWAL
Trigger: CAGTGCCCAATTCCAGGGTCACCCCCGAGAGGACAA...CCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594773.5
3UTR-3UTR TCA 90 bp AAGGAGTTTCTTCTTGAGGTTGCGGACAGCCCGGGAGTACAGCATGGCCCTCACACAGGCTGCCTTCGATaGCACGTTTCACAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: KEFLLEVADSPGVQHGPHTGCLR*HVSQAG
Trigger: ACCAGCTTGTGAAACGTGTCATCGAAGGCAGCCTGT...GTGAGGGCCATGCTGTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR GCA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAGAGAGCACTTCCAGATaGCTGTTGTCCTCTCGGGGG +
Preference number: 2 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTEESTSR*LLSSRG
Trigger: CCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTC...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594773.5
3UTR-3UTR GCA 90 bp TGCCTTTCGGGGGCAGCGCCACCTTCTGAAGGGGAACCAAGACAGATTTGGAGGCTCCGCCCCAGAGACTaGAGAGACGTTTGTTTTCAT +
Preference number: 2 (lower is better)
Translates to: CLSGAAPPSEGEPRQIWRLRPRD*RDVCFH
Trigger: ATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAG...CCTCCAAATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCCCCCGAAAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp TCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGCTCCGCCCCAGAGACTaGAGAGACGTTTGTTTTCAT +
Preference number: 2 (lower is better)
Translates to: SCTHQTVLGHWLQADPGQLRPRD*RDVCFH
Trigger: ATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAG...CTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp AGCCCACCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCATTACACGCAGCAGAGTaGTGGGGAATCTGGAGAGCG +
Preference number: 2 (lower is better)
Translates to: SPPQEEPASPYKGCNKTALHAAE*WGIWRA
Trigger: CGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAA...TGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGGTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR CCA 90 bp GCCTGTTGTCCTCTCGGGGGTGACCCTGGAACTAGAACGACAGAAAAGACACTGAGCTACAGAAGCCACTaGAAGCAAGCAGAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: ACCPLGGDPGTRTTEKTLSYRSH*KQAEPL
Trigger: CAGGGGCTCTGCTTGCTTCCAGTGGCTTCTGTAGCT...CAGTGTCTTTTCTGTCGTTCTAGTTCCAGGGTCACCCCCGAGAGGACAACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR-3UTR CCA 90 bp CGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGCTGGCCCGGCTATaGGTTCCCGGGAATGGGAAA +
Preference number: 2 (lower is better)
Translates to: RSASAGRSPSPWVSSFWTWLARL*VPGNGK
Trigger: TTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCA...TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR CCA 90 bp CGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACAGCTGAGGTCGGCTTCTaGTCGGCTCCTCGCAAGTTC +
Preference number: 2 (lower is better)
Translates to: RSASAGRSPSPWVSSFWTAEVGF*SAPRKF
Trigger: GAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGC...TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CAA 90 bp AGACACACTCTCTTGGGAGCTGGAATCATGCCAACCTTCAATGACTaGCTGCTGATCCTCTTCCGAGGGAAGCAGGTACCTGAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: RHTLLGAGIMPTFND*LLILFRGKQVPEEA
Trigger: GGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR TCA 90 bp GCCAGTCCAACTGGAAAATCAGCCAGAGGAGCTGGTTCCTCAGCACTCACAGGCGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGC +
Preference number: 2 (lower is better)
Translates to: ASPTGKSARGAGSSALTGDPGQG*CFKGNC
Trigger: GCAATTGCCCTTAAAACATCATCCCTGCCCTGGATC...GCCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGATTTTCCAGTTGGACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGC +
Preference number: 2 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIADPGQG*CFKGNC
Trigger: GCAATTGCCCTTAAAACATCATCCCTGCCCTGGATC...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp CCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGGGCAGCGCCACCTTCTaGAGGGGAACCAAGACAGAT +
Preference number: 2 (lower is better)
Translates to: PYVRKVQSLRGFTTPIPLGSATF*RGTKTD
Trigger: ATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCC...CAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp GCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTTCAGCACTCACAGGCTaGGGTGCCTTTCGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: ASELWYPSADLVITGNLSSALTG*GAFRGQ
Trigger: CTGCCCCCGAAAGGCACCTCAGCCTGTGAGTGCTGA...AGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAATCACCACCACCAGTGTaGAGGTTGTGCGGAGATGAC +
Preference number: 2 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTESPPPV*RLCGDD
Trigger: GTCATCTCCGCACAACCTTCACACTGGTGGTGGTGA...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR TCA 90 bp CTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTCTTTTGGCTCCTGGATaGGACACACTCTCTTGGGAG +
Preference number: 2 (lower is better)
Translates to: LEAQVLIGQLLLGEVQVLLLAPG*DTLSWE
Trigger: CTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAG...AAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR GCA 90 bp ATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCTGGCTTTTGAGGGGGTaGCCAGAGGGCCCTGGTTAC +
Preference number: 2 (lower is better)
Translates to: MGSREWESSSRRKLHRNTWLLRG*PEGPGY
Trigger: GTAACCAGGGCCCTCTGGGCACCCCCTCAAAAGCCA...GGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR GCA 90 bp TCTGGCGGGCAGTCCTTGGCAGCATCATTTCTGTCTGGCAGGGATGGTTTTGCCTTCTCGCTCATCCGCTaGATTTCTGCCAACTTCAGC +
Preference number: 2 (lower is better)
Translates to: SGGQSLAASFLSGRDGFAFSLIR*ISANFS
Trigger: GCTGAAGTTGGCAGAAATGCAGCGGATGAGCGAGAA...GGCAAAACCATCCCTGCCAGACAGAAATGATGCTGCCAAGGACTGCCCGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CCA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAGTAAAGCACCCAGAGTaGCGAGAGAGCACTTCCAGA +
Preference number: 2 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLVKHPE*RESTSR
Trigger: TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452918.7
ENST00000593795.5
3UTR-3UTR CCA 90 bp GGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAGTAAAGCACCCAGAGTaGCGAGAGAGCACTTCCAGA +
Preference number: 2 (lower is better)
Translates to: GSRPIQGRDDVLRAIAASVKHPE*RESTSR
Trigger: TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC...TGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
3UTR-3UTR CCA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGTACTTGGGCACTaGCTCCAGGCCGATCCAGGG +
Preference number: 2 (lower is better)
Translates to: ATVQRASELWYPSADLVITVLGH*LQADPG
Trigger: CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGT...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp ACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACCTCAGGCATCACCTCTaGGCTCTCCAGCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: TALDDAIRAKSAESQRVYLRHHL*ALQLSL
Trigger: GAGGCTGAGCTGGAGAGCCCAGAGGTGATGCCTGAG...GTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CCA 90 bp CTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTTCTTCTTTTTGGACATaGGACGACCCCGAGGCCTGT +
Preference number: 2 (lower is better)
Translates to: LEAQVLIGQLLLGEVQVLSSFWT*DDPEAC
Trigger: ACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGA...AAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597280.5
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR TCA 90 bp AAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCAGGAGATGTGCCCTTTaGCCCCTGCCAAGGACTCAC +
Preference number: 2 (lower is better)
Translates to: KPPPQRLQRRLFSCTHQTRRCAL*PLPRTH
Trigger: GTGAGTCCTTGGCAGGGGTCAAAGGGCACATCTCCT...GGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR-3UTR TCA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGCAGCGCCACCTTCTaGAGGGGAACCAAGACAGAT +
Preference number: 2 (lower is better)
Translates to: LTEHFWRAMASPTGKSARGSATF*RGTKTD
Trigger: ATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCC...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp CCCCGTATAAATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACTCAGCACTCACAGGCTaGGGTGCCTTTCGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: PRINSGEQRENTICDRFHSALTG*GAFRGQ
Trigger: CTGCCCCCGAAAGGCACCTCAGCCTGTGAGTGCTGA...GTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCAGCACTCACAGGCTaGGGTGCCTTTCGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: KGCNKTALDDAIRAKSAESALTG*GAFRGQ
Trigger: CTGCCCCCGAAAGGCACCTCAGCCTGTGAGTGCTGA...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp CCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGCTGGTCTCAAACTCCTaGCCTCAGGTGATCCATCCG +
Preference number: 2 (lower is better)
Translates to: PYVRKVQSLRGFTTPIPLLVSNS*PQVIHP
Trigger: CGGATGGATCACCTGAGGTCAGGAGTTTGAGACCAG...CAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR GCA 90 bp CTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCCCATGTTTTAAGGGCAATTaGTGCTTCAAGGCTTATCTT +
Preference number: 2 (lower is better)
Translates to: LCAPARQHPTLPLPRGFPCFKGN*CFKAYL
Trigger: AAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACA...TGGGAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593795.5
ENST00000597280.5
3UTR-3UTR GCA 90 bp CTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCCTCCGCCCCAGAGACTaGAGAGACGTTTGTTTTCAT +
Preference number: 2 (lower is better)
Translates to: LCRNTSNVSSLCSCPSAPLRPRD*RDVCFH
Trigger: ATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAG...GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
3UTR-3UTR GCA 90 bp AGCCCACCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCAGCTTTGGTACCCGAGTaGAGACTTGGTAATTACCGG +
Preference number: 2 (lower is better)
Translates to: SPPQEEPASPYKGCNKTAALVPE*RLGNYR
Trigger: CCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGC...TGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGGTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR GCA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCAGTCGCCCTTCCACTTaGATGATGGCAAGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGSRPST*MMARPS
Trigger: AGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACT...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp CAACTCAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGGGACACAGCCAACTaGCATCCTCTGTGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: QLKYGNCSESFRALVPECRDTAN*HPLWQW
Trigger: CCACTGCCACAGAGGATGGCAGTTGGCTGTGTCCCT...GCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp GTGGTTTTGATCTATTTGTTGGCCCGCTTGTGTCTGTACATCTGCATCATCCTCACCGTACTTGGGCACTaGCTCCAGGCCGATCCAGGG +
Preference number: 2 (lower is better)
Translates to: VVLIYLLARLCLYICIILTVLGH*LQADPG
Trigger: CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGT...GAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGATCAAAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593795.5
ENST00000597280.5
ENST00000600239.5
3UTR-3UTR CCA 90 bp CCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAGAGTGCTGGGGAATCTaGAGAGCGGGGGCGATCACA +
Preference number: 2 (lower is better)
Translates to: PLLTKAVIRQHLTMPYVRECWGI*RAGAIT
Trigger: TGTGATCGCCCCCGCTCTCCAGATTCCCCAGCACTC...TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR CCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGCACGCAGCAGAGTGCTaGGGAATCTGGAGAGCGGGG +
Preference number: 2 (lower is better)
Translates to: KGCNKTALDDAIRAKSAEHAAEC*GIWRAG
Trigger: CCCCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTG...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR CCA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAACACATCCACGGAGGCTaGCCTGGAGGCCTTGAGGGG +
Preference number: 2 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKHIHGG*PGGLEG
Trigger: CCCCTCAAGGCCTCCAGGCCAGCCTCCGTGGATGTG...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp ATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCGTGCCCAGAGGGCCCTaGTTACCTCGGAATGCCTTA +
Preference number: 2 (lower is better)
Translates to: MGSREWESSSRRKLHRNTVPRGP*LPRNAL
Trigger: TAAGGCATTCCGAGGTAACCAGGGCCCTCTGGGCAC...GGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
3UTR CAA 90 bp GGTGGTCTATGTACTCTCGCCCAAACAAAGTGGAGTCTTCGAAGTTaGGAAACGCAGCAGGTGAGGGAGCTATATCTTGCAGGCCGACAG +
Preference number: 2 (lower is better)
Translates to: GGLCTLAQTKWSLRS*ETQQVRELYLAGRQ
Trigger: CTGTCGGCCTGCAAGATATAGCTCCCTCACCTGCTGCGTTTCCAAACTTCGAAGACTCCACTTTGTTTGGGCGAGAGTACATAGACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CAA 90 bp TGGTGGGTTCTCGCCTCTTTTGGCTCCTGGATGAGACACACTCTCTaGGGAGCTGGAATCATGCCAACCTTCAATGACTTGCTGCTGATC +
Preference number: 2 (lower is better)
Translates to: WWVLASFGSWMRHTL*GAGIMPTFNDLLLI
Trigger: GATCAGCAGCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGAGGCGAGAACCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR TCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTACAATTCTCTAAGTaGTTTCCAGTGATGGAAACA +
Preference number: 2 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTLQFSK*FPVMET
Trigger: TGTTTCCATCACTGGAAATCACTTAGAGAATTGTAG...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
3UTR-3UTR TCA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTTGCCCTTGGCCAGTGTaGGGTTTGCTCCTTCAGCAA +
Preference number: 2 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCCPWPV*GLLLQQ
Trigger: TTGCTGAAGGAGCAAACCTCACACTGGCCAAGGGCA...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAACTTGGAGCCTTGGCCTaGATTTCAGGTTTCGTAGGA +
Preference number: 2 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTELGALA*ISGFVG
Trigger: TCCTACGAAACCTGAAATTCAGGCCAAGGCTCCAAG...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR GCA 90 bp TACAGCCAATACAAGTGGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTAGCCCTCCGCCCCAGAGACTaGAGAGACGTTTGTTTTCAT +
Preference number: 2 (lower is better)
Translates to: YSQYKWHFPLSSVADALALRPRD*RDVCFH
Trigger: ATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAG...GGCTAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR GCA 90 bp CCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTACTCACAGGCTGAGGTaGCTTTCGGGGGCAGCGCCA +
Preference number: 2 (lower is better)
Translates to: PYKGCNKTALDDAIRAKSTHRLR*LSGAAP
Trigger: TGGCGCTGCCCCCGAAAGGCACCTCAGCCTGTGAGT...ACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp GCCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACAGCTTTGGTACCCGAGTaGAGACTTGGTAATTACCGG +
Preference number: 2 (lower is better)
Translates to: ASETSAPETAETFVFMYTALVPE*RLGNYR
Trigger: CCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGC...TGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp ACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACATGATCTCAGCTCACTaGAACCTCTGCCTCCCCGGT +
Preference number: 2 (lower is better)
Translates to: TALDDAIRAKSAESQRVYMISAH*NLCLPG
Trigger: ACCGGGGAGGCAGAGGTTGCAGTGAGCTGAGATCAT...GTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR GCA 90 bp CGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTGGTTACCTCGGAATaGCTTACCCAGCAGGAACTA +
Preference number: 2 (lower is better)
Translates to: RCHTCEKCRVSEGLQPPSLVTSE*LTQQEL
Trigger: TAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAG...GGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR GCA 90 bp GGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTAAACAGTCCATGAGATaGAGGTGTTTGGGACACACA +
Preference number: 2 (lower is better)
Translates to: GLINFGPVFGTLAGPAMGKQSMR*RCLGHT
Trigger: TGTGTGTCCCAAACACCTGCATCTCATGGACTGTTT...ACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
3UTR-3UTR CCA 90 bp CCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACCTAACAGAGCACTTCTaGAGAGCAATGGCCAGTCCA +
Preference number: 2 (lower is better)
Translates to: PQEEPASPYKGCNKTALDLTEHF*RAMASP
Trigger: TGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG...GTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR CCA 90 bp GAGACATGTAAATCTGGGGCCGATTTCATCTGTTTAATGATTACTCCCCACCCGGAGTGCTGGGGAATCTaGAGAGCGGGGGCGATCACA +
Preference number: 2 (lower is better)
Translates to: ETCKSGADFICLMITPHPECWGI*RAGAIT
Trigger: TGTGATCGCCCCCGCTCTCCAGATTCCCCAGCACTC...CGGGTGGGGAGTAATCATTAAACAGATGAAATCGGCCCCAGATTTACATGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR CCA 90 bp CTGGTTACCTCGGAATGCCTTACCCAGCAGGAACTAAGCTCAGTATTAAATGAACTGTGTTCGGGACCCTaGCTGGCCCGGCTATGGGTT +
Preference number: 2 (lower is better)
Translates to: LVTSECLTQQELSSVLNELCSGP*LARLWV
Trigger: AACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAG...TTCATTTAATACTGAGCTTAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR CCA 90 bp GCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTGGGTTTAATAAACTTTaGGCCTGTGTTCGGGACCCT +
Preference number: 2 (lower is better)
Translates to: AQVLIGQLLLGEVQVLGFGFNKL*ACVRDP
Trigger: AGGGTCCCGAACACAGGCCCAAAGTTTATTAAACCC...AAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR CCA 90 bp ATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCGCCAGGAACTGGGCATaGGCACAAACAGTCCATGAG +
Preference number: 2 (lower is better)
Translates to: MGSREWESSSRRKLHRNTARNWA*AQTVHE
Trigger: CTCATGGACTGTTTGTGCCCATGCCCAGTTCCTGGC...GGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
3UTR-3UTR CCA 90 bp CGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACAGGTTCTCGCCTCTTTTaGCTCCTGGATGAGACACAC +
Preference number: 2 (lower is better)
Translates to: RSASAGRSPSPWVSSFWTGSRLF*LLDETH
Trigger: GTGTGTCTCATCCAGGAGCCAAAAGAGGCGAGAACC...TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR CAA 90 bp AGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTaGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTA +
Preference number: 2 (lower is better)
Translates to: RDCRDVCFHVHTKPY*GTGSRPIQGRDDVL
Trigger: TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CAA 90 bp TCCACTTGCATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTTaGCTGGTCATGTTATGTGGTAGGTGGCTGTCATCTGTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: STCMMARPSGLGTVR*LVMLCGRWLSSVRE
Trigger: TTCTCTCACAGATGACAGCCACCTACCACATAACATGACCAGCAAACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp CGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTCTAAGTGATTTCCAGTaGTGGAAACAAGCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: RNTSNVSSLCSCPSAPNPLSDFQ*WKQARD
Trigger: GTCTCTGGCTTGTTTCCATCACTGGAAATCACTTAG...AGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593795.5
ENST00000594773.5
3UTR-3UTR TCA 90 bp CTGGAACATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACTACAATTCTCTAAGTaGTTTCCAGTGATGGAAACA +
Preference number: 2 (lower is better)
Translates to: LEHALLAPDTFTAPALNPLQFSK*FPVMET
Trigger: TGTTTCCATCACTGGAAATCACTTAGAGAATTGTAG...TGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330854.15
3UTR-3UTR TCA 90 bp AACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGC +
Preference number: 2 (lower is better)
Translates to: NRALLESNGQSNWKISQRDPGQG*CFKGNC
Trigger: GCAATTGCCCTTAAAACATCATCCCTGCCCTGGATC...CCTCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp ATGTCTGTCCCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTGGTGGTTTCTACAAATGTGGCCAAAATaGCCAGGGCCAACAAGCTGG +
Preference number: 2 (lower is better)
Translates to: MSVPKGPKTSGRESWWFLQMWPK*PGPTSW
Trigger: CCAGCTTGTTGGCCCTGGTCATTTTGGCCACATTTG...TAGAAACCACCAACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR TCA 90 bp CTTTACAGCCAATACAAGTGGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTACAAATGTGGCCAAAATaGCCAGGGCCAACAAGCTGG +
Preference number: 2 (lower is better)
Translates to: LYSQYKWHFPLSSVADALQMWPK*PGPTSW
Trigger: CCAGCTTGTTGGCCCTGGTCATTTTGGCCACATTTG...TAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR TCA 90 bp AAGGAGTTTCTTCTTGAGGTTGCGGACAGCCCGGGAGTACAGCATGGCCCTCACTTCAGAAGCCGGTCTTaGAGTCTCATTATGTACTTG +
Preference number: 2 (lower is better)
Translates to: KEFLLEVADSPGVQHGPHFRSRS*SLIMYL
Trigger: CAAGTACATAATGAGACTTCAAGACCGGCTTCTGAA...GTGAGGGCCATGCTGTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR TCA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGACTGCTTCCCCTTCCATaGGGTCCACGGGGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRLLPLP*GPRGSP
Trigger: AGGAGAGCCCCGTGGACCTCATGGAAGGGGAAGCAG...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR GCA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGAACTCACAGGCTGAGGTaGCTTTCGGGGGCAGCGCCA +
Preference number: 2 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRTHRLR*LSGAAP
Trigger: TGGCGCTGCCCCCGAAAGGCACCTCAGCCTGTGAGT...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp CCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGATTACACGCAGCAGAGTaGTGGGGAATCTGGAGAGCG +
Preference number: 2 (lower is better)
Translates to: PLLTKAVIRQHLTMPYVRLHAAE*WGIWRA
Trigger: CGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAA...TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR GCA 90 bp GCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAAC +
Preference number: 2 (lower is better)
Translates to: AQVLIGQLLLGEVQVLGFLCLYI*IILCRN
Trigger: GTTCCGACAGAGGATGATGCAGATGTACAGACACAA...AAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
3UTR-3UTR CCA 90 bp CCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGTAAAGCACCCAGAGTaGCGAGAGAGCACTTCCAGA +
Preference number: 2 (lower is better)
Translates to: PPQRLQRRLFSCTHQTVLVKHPE*RESTSR
Trigger: TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC...AAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR-3UTR CCA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTAAGAGCTTCAGAGCTTTaGTACCCGAGTGCAGACTTG +
Preference number: 2 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVRASEL*YPSADL
Trigger: CAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCT...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp CTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCTACAGCCAATACAAGTaGCATTTCCCGCTCAGTTCT +
Preference number: 2 (lower is better)
Translates to: LCRNTSNVSSLCSCPSAPYSQYK*HFPLSS
Trigger: AGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTA...GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CCA 90 bp ATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCGGCAGAGAGAGTTGGTaGTTTCTAGGGCAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: MGSREWESSSRRKLHRNTGRESW*FLGQEP
Trigger: TGGCTCTTGCCCTAGAAACCACCAACTCTCTCTGCC...GGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CAA 90 bp AGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCACTaGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTT +
Preference number: 2 (lower is better)
Translates to: RRSLPLLTKAVIRQH*TMPYVRKVQSLRGF
Trigger: AAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CAA 90 bp CGAACTGGTTCATGGACTTTTGGCTCCTGGATGAGACACACTCTCTaGGGAGCTGGAATCATGCCAACCTTCAATGACTTGCTGCTGATC +
Preference number: 2 (lower is better)
Translates to: RTGSWTFGSWMRHTL*GAGIMPTFNDLLLI
Trigger: GATCAGCAGCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGTCCATGAACCAGTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR TCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTAAGTGATTTCCAGTaGTGGAAACAAGCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: NKPETVKHPEWRESTSRCLSDFQ*WKQARD
Trigger: GTCTCTGGCTTGTTTCCATCACTGGAAATCACTTAG...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
3UTR-3UTR TCA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAACTAAGTGATTTCCAGTaGTGGAAACAAGCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTELSDFQ*WKQARD
Trigger: GTCTCTGGCTTGTTTCCATCACTGGAAATCACTTAG...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594773.5
3UTR-3UTR TCA 90 bp CGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCAGAAGGAAAAGGATTTaGAGACCCTCACAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: RCHTCEKCRVSEGLQPPSRRKRI*RPSQRD
Trigger: GTCCCTTTGTGAGGGTCTTCAAATCCTTTTCCTTCT...GGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp CTCTTGGGAGCTGGAATCATGCCAACCTTCAATGACTTGCTGCTGATCCTCTTCATCTCTGGTCCCACCTaGGCAACAAATCTAGCCAGT +
Preference number: 2 (lower is better)
Translates to: LLGAGIMPTFNDLLLILFISGPT*ATNLAS
Trigger: ACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGAT...GAAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR GCA 90 bp CCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCGGGGGCGATCACATaGCTGGAAATAGAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: PYKGCNKTALDDAIRAKSAGAIT*LEIEQL
Trigger: CAGCTGCTCTATTTCCAGGCATGTGATCGCCCCCGC...ACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR GCA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTTGGGGGAAATTTCTCTaGATACCAGCACGCCAGCGA +
Preference number: 2 (lower is better)
Translates to: ESFRALVPECRLGNYREFWGKFL*IPARQR
Trigger: TCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCA...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAACACCAAACCGTACTTaGGCACTGGCTCCAGGCCGA +
Preference number: 2 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKTPNRT*ALAPGR
Trigger: TCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp TATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAGAGCTTCAGAGCTTTaGTACCCGAGTGCAGACTTG +
Preference number: 2 (lower is better)
Translates to: YGNCSESFRALVPECRLGRASEL*YPSADL
Trigger: CAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCT...ACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp CCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGAACAGTCCGTTTGCTaGTCATGTTATGTGGTAGGT +
Preference number: 2 (lower is better)
Translates to: PQEEPASPYKGCNKTALDEQSVC*SCYVVG
Trigger: ACCTACCACATAACATGACCAGCAAACGGACTGTTC...GTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601879.5
3UTR-3UTR CCA 90 bp TGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTCCCCCGTATAAAGATGGCAAGGCCCTCTaGACTAGGAACAGTCCGTTT +
Preference number: 2 (lower is better)
Translates to: WYPSADLVITGNLSPPYKDGKAL*TRNSPF
Trigger: AAACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATC...TTTATACGGGGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp CCCCGTATAAATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACAACTGCCATCCTCTGTaGCAGTGGCTGTCACAGTCG +
Preference number: 2 (lower is better)
Translates to: PRINSGEQRENTICDRFHNCHPL*QWLSQS
Trigger: CGACTGTGACAGCCACTGCCACAGAGGATGGCAGTT...GTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR CAA 90 bp GCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTaGCTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGA +
Preference number: 2 (lower is better)
Translates to: ANNEKTPSVIVSTSR*LTEHFWRAMASPTG
Trigger: TCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAGCAAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CAA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTaGGTAATTACCGGGAATTTGTCTCCCCCGTATAAATTCTGGCGA +
Preference number: 2 (lower is better)
Translates to: ATVQRASELWYPSAD*VITGNLSPPYKFWR
Trigger: TCGCCAGAATTTATACGGGGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CAA 90 bp CTGGTCATGTTATGTGGTAGGTGGCTGTCATCTGTGAGAGAAAACTaGAGCAAGAGAAGAGACAGGCGTGGCCTATTTCCACACGCACAT +
Preference number: 2 (lower is better)
Translates to: LVMLCGRWLSSVREN*SKRRDRRGLFPHAH
Trigger: ATGTGCGTGTGGAAATAGGCCACGCCTGTCTCTTCTCTTGCTCAAGTTTTCTCTCACAGATGACAGCCACCTACCACATAACATGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp CTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGAATCCTGCCCATTTaGTTATTTCTATCCCAAATC +
Preference number: 2 (lower is better)
Translates to: LEAQVLIGQLLLGEVQVLGILPI*LFLSQI
Trigger: GATTTGGGATAGAAATAATCAAATGGGCAGGATTCC...AAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR GCA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGAGCGGGGGCGATCACATaGCTGGAAATAGAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRAGAIT*LEIEQL
Trigger: CAGCTGCTCTATTTCCAGGCATGTGATCGCCCCCGC...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR GCA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTCGCCCTTCCACTTaGATGATGGCAAGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKSRPST*MMARPS
Trigger: AGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACT...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp AGTTTGCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCATGGCTTTTGAGGGGGTaGCCAGAGGGCCCTGGTTAC +
Preference number: 2 (lower is better)
Translates to: SLLTLWILKRHVNLGPISWLLRG*PEGPGY
Trigger: GTAACCAGGGCCCTCTGGGCACCCCCTCAAAAGCCA...TGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR GCA 90 bp GAGGGCCCTGGTTACCTCGGAATGCCTTACCCAGCAGGAACTAAGCTCAGTATTCATCCGCTGCATTTCTaGCAACTTCAGCTTGTAATA +
Preference number: 2 (lower is better)
Translates to: EGPGYLGMPYPAGTKLSIHPLHF*QLQLVI
Trigger: TATTACAAGCTGAAGTTGGCAGAAATGCAGCGGATG...AATACTGAGCTTAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAGGGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR GCA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAATCTAGCCAGTTTCTCTaGAGTCTCCATTGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTESSQFL*SLHCLH
Trigger: ATGAAGACAATGGAGACTGCAGAGAAACTGGCTAGA...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CCA 90 bp CCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGACTTCTGGAGAGCAATaGCCAGTCCAACTGGAAAAT +
Preference number: 2 (lower is better)
Translates to: PYVRKVQSLRGFTTPIPLTSGEQ*PVQLEN
Trigger: ATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGT...CAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp TGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTCCCCCGTATAAAAGAGCTTCAGAGCTTTaGTACCCGAGTGCAGACTTG +
Preference number: 2 (lower is better)
Translates to: WYPSADLVITGNLSPPYKRASEL*YPSADL
Trigger: CAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCT...TTTATACGGGGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp CTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTTCATCAACTCAAGTATaGCAACTGTTCAGAGAGCTT +
Preference number: 2 (lower is better)
Translates to: LEAQVLIGQLLLGEVQVLSSTQV*QLFREL
Trigger: AAGCTCTCTGAACAGTTGCCATACTTGAGTTGATGA...AAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CCA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTTCGCCCAGGCTGGAGTaGAGTGGCATGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: NSGEQRENTICDRFHITFSPRLE*SGMISA
Trigger: AGCTGAGATCATGCCACTCCACTCCAGCCTGGGCGA...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR CCA 90 bp GCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGGGTTTAATAAACTTTaGGCCTGTGTTCGGGACCCT +
Preference number: 2 (lower is better)
Translates to: APETAETFVFMYTPNRTWGFNKL*ACVRDP
Trigger: AGGGTCCCGAACACAGGCCCAAAGTTTATTAAACCC...CCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CCA 90 bp CGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACAATCACTCAGACTACTTaGAGCCTTGGCCTGAATTTC +
Preference number: 2 (lower is better)
Translates to: RSASAGRSPSPWVSSFWTITQTT*SLGLNF
Trigger: GAAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGAT...TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CCA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTAATTCGAACTGGTTCATaGACTGGGGCTTGGAAAACA +
Preference number: 2 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVIRTGS*TGAWKT
Trigger: TGTTTTCCAAGCCCCAGTCCATGAACCAGTTCGAAT...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
3UTR-3UTR CCA 90 bp TTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGGACGAATAGGCAATTCGAACTaGTTCATGGACTGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: FCWAKSKSLGFFFLDMGRIGNSN*FMDWGL
Trigger: CAAGCCCCAGTCCATGAACCAGTTCGAATTGCCTAT...TCGTCCCATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
3UTR-3UTR TCA 90 bp AAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCCTAAGTGATTTCCAGTaGTGGAAACAAGCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: KPPPQRLQRRLFSCTHQTLSDFQ*WKQARD
Trigger: GTCTCTGGCTTGTTTCCATCACTGGAAATCACTTAG...GGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR-3UTR TCA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGAAGGAGAGGTGTCCTCTaGGAGTGTAGGGGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRRRGVL*ECRGLS
Trigger: AGAAAGCCCCCTACACTCTCAGAGGACACCTCTCCT...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR-3UTR TCA 90 bp TATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTTCACATCAGTGGTTTTaGTCTATTTGTTGGCCCGCT +
Preference number: 2 (lower is better)
Translates to: YGNCSESFRALVPECRLGSHQWF*SICWPA
Trigger: AGCGGGCCAACAAATAGATCAAAACCACTGATGTGA...ACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR TCA 90 bp CACTTAGCTTTTATGATGGTCACAAATGTGGCCAAAATGACCAGGGCCAACAAGCTTTTGGCTCCTGGATaGGACACACTCTCTTGGGAG +
Preference number: 2 (lower is better)
Translates to: HLAFMMVTNVAKMTRANKLLAPG*DTLSWE
Trigger: CTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAG...CTTGTTGGCCCTGGTCATTTTGGCCACATTTGTGACCATCATAAAAGCTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR GCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGTGTTTTAAGGGCAATTaGTGCTTCAAGGCTTATCTT +
Preference number: 2 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSCFKGN*CFKAYL
Trigger: AAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACA...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
3UTR-3UTR GCA 90 bp CCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCTGTTTTAAGGGCAATTaGTGCTTCAAGGCTTATCTT +
Preference number: 2 (lower is better)
Translates to: PLSEHIECVFFVLLPVSTCFKGN*CFKAYL
Trigger: AAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACA...GGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
3UTR-3UTR GCA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTCATACGTGCGAAAAGTaGAGAGTCTCAGAGGGTTTA +
Preference number: 2 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCHTCEK*RVSEGL
Trigger: TAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGAATCAGCCAGAGGAGCTaGTTCCTCAGCACTCACAGG +
Preference number: 2 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRISQRS*FLSTHR
Trigger: CCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGAT...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp CTCTTGGGAGCTGGAATCATGCCAACCTTCAATGACTTGCTGCTGATCCTCTTCACTTCTGGAGAGCAATaGCCAGTCCAACTGGAAAAT +
Preference number: 2 (lower is better)
Translates to: LLGAGIMPTFNDLLLILFTSGEQ*PVQLEN
Trigger: ATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGT...GAAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CCA 90 bp ACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACCCCCCGTATAAATTCTaGCGAACAACGAGAAAACAC +
Preference number: 2 (lower is better)
Translates to: TALDDAIRAKSAESQRVYPPYKF*RTTRKH
Trigger: GTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGGG...GTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp CCCCGTATAAATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACAGAGCTTCAGAGCTTTaGTACCCGAGTGCAGACTTG +
Preference number: 2 (lower is better)
Translates to: PRINSGEQRENTICDRFHRASEL*YPSADL
Trigger: CAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCT...GTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp CGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCTCATCAACTCAAGTATaGCAACTGTTCAGAGAGCTT +
Preference number: 2 (lower is better)
Translates to: RCHTCEKCRVSEGLQPPSSSTQV*QLFREL
Trigger: AAGCTCTCTGAACAGTTGCCATACTTGAGTTGATGA...GGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp CCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAGAGTGGAGAATTGAGTaGAGTTACACGCAGCAGAGT +
Preference number: 2 (lower is better)
Translates to: PLLTKAVIRQHLTMPYVREWRIE*SYTQQS
Trigger: ACTCTGCTGCGTGTAACTCCACTCAATTCTCCACTC...TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR CCA 90 bp TTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGGACGAATTCGAACTGGTTCATaGACTGGGGCTTGGAAAACA +
Preference number: 2 (lower is better)
Translates to: FCWAKSKSLGFFFLDMGRIRTGS*TGAWKT
Trigger: TGTTTTCCAAGCCCCAGTCCATGAACCAGTTCGAAT...TCGTCCCATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
3UTR-3UTR CCA 90 bp ACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTATAGGCAATTCGAACTaGTTCATGGACTGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: TAETFVFMYTPNRTWALAIGNSN*FMDWGL
Trigger: CAAGCCCCAGTCCATGAACCAGTTCGAATTGCCTAT...AGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
3UTR-3UTR CCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGGCCTCTTTTGGCTCCTaGATGAGACACACTCTCTTG +
Preference number: 2 (lower is better)
Translates to: KGCNKTALDDAIRAKSAEASFGS*MRHTLL
Trigger: CAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGAGGC...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR CAA 90 bp TCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTaGTCTCCCCCGTATAAATTCTGGCGAACAACGAGAAAACACCAT +
Preference number: 2 (lower is better)
Translates to: SELWYPSADLVITGN*SPPYKFWRTTRKHH
Trigger: ATGGTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp CAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATAAACTTCAACGATCCTaGTTCACAAGGAAGGATGAG +
Preference number: 2 (lower is better)
Translates to: QRASELWYPSADLVITGNKLQRS*FTRKDE
Trigger: CTCATCCTTCCTTGTGAAGCAGGATCGTTGAAGTTT...ATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR GCA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTTGGGGGAAATTTCTCTaGATACCAGCACGCCAGCGA +
Preference number: 2 (lower is better)
Translates to: NSGEQRENTICDRFHITFWGKFL*IPARQR
Trigger: TCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCA...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp CACTTAGCTTTTATGATGGTCACAAATGTGGCCAAAATGACCAGGGCCAACAAGGAGGGAGCTATATCTTaGAGGCCGACAGCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: HLAFMMVTNVAKMTRANKEGAIS*RPTASK
Trigger: CTTAGAAGCTGTCGGCCTGCAAGATATAGCTCCCTC...CTTGTTGGCCCTGGTCATTTTGGCCACATTTGTGACCATCATAAAAGCTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CCA 90 bp CGATTTCATCTGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTACACCAAACCGTACTTaGGCACTGGCTCCAGGCCGA +
Preference number: 2 (lower is better)
Translates to: RFHLFNDYSPPDRAILYCTPNRT*ALAPGR
Trigger: TCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT...ACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACAGATGAAATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTCCCCCGTATAAATTCTaGCGAACAACGAGAAAACAC +
Preference number: 2 (lower is better)
Translates to: ATVQRASELWYPSADLVIPPYKF*RTTRKH
Trigger: GTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGGG...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp GGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATATGTTATGTGGTAGGTaGCTGTCATCTGTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: GNCSESFRALVPECRLGNMLCGR*LSSVRE
Trigger: TTCTCTCACAGATGACAGCCACCTACCACATAACAT...ATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGAGATGGCAAGGCCCTCTaGACTAGGAACAGTCCGTTT +
Preference number: 2 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRDGKAL*TRNSPF
Trigger: AAACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATC...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp AGTTTGCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCAATGGGTTCCCGGGAATaGGAAAGCAGTTCCAGACGG +
Preference number: 2 (lower is better)
Translates to: SLLTLWILKRHVNLGPISMGSRE*ESSSRR
Trigger: CCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT...TGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CCA 90 bp GGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTTCCGGCAGAGAGAGTTaGTGGTTTCTAGGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: GMGKQFQTETTQKYHLAFSGRES*WFLGQE
Trigger: CTCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGA...AAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CAA 90 bp ATTCATCAACTCAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTaGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTCC +
Preference number: 2 (lower is better)
Translates to: IHQLKYGNCSESFRA*VPECRLGNYREFVS
Trigger: GGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTGAGTTGATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CAA 90 bp AGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTAACTGTAGTTaGCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCG +
Preference number: 2 (lower is better)
Translates to: RVSEGLQPPSLCNCS*LTLWILKRHVNLGP
Trigger: CGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp GGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGC +
Preference number: 2 (lower is better)
Translates to: GMGKQFQTETTQKYHLAFDPGQG*CFKGNC
Trigger: GCAATTGCCCTTAAAACATCATCCCTGCCCTGGATC...AAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
3UTR-3UTR TCA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGAGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGC +
Preference number: 2 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRDPGQG*CFKGNC
Trigger: GCAATTGCCCTTAAAACATCATCCCTGCCCTGGATC...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTGATGCATTGATGAGATaGGACACCATGAATAACACA +
Preference number: 2 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCDALMR*DTMNNT
Trigger: TGTGTTATTCATGGTGTCTCATCTCATCAATGCATC...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp CAACTCAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAAGCTCAGTATTAAATaGAATGCCTGCTGGAGGTTA +
Preference number: 2 (lower is better)
Translates to: QLKYGNCSESFRALVPECKLSIK*NACWRL
Trigger: TAACCTCCAGCAGGCATTTCATTTAATACTGAGCTT...GCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR TCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGGTTTGGGACACACACTaGGACATCAAAGAAAGGGAA +
Preference number: 2 (lower is better)
Translates to: KGCNKTALDDAIRAKSAEVWDTH*DIKERE
Trigger: TTCCCTTTCTTTGATGTCTCAGTGTGTGTCCCAAAC...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR GCA 90 bp AATTTGAAAGCAGAACTATTTTGGTCATGTAGAAACCACAGGTCAGGGTTATCGGGTGTTTCAGCCTGGTaGCTGAGGATAGGAGGGTCT +
Preference number: 2 (lower is better)
Translates to: NLKAELFWSCRNHRSGLSGVSAW*LRIGGS
Trigger: AGACCCTCCTATCCTCAGGCACCAGGCTGAAACACC...CGATAACCCTGACCTGTGGTTTCTACATGACCAAAATAGTTCTGCTTTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CCA 90 bp CCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTCTCCTTCAGCAAACCTaGAAGGTAAGAATGGGGCAT +
Preference number: 2 (lower is better)
Translates to: PYKGCNKTALDDAIRAKSLLQQT*KVRMGH
Trigger: ATGCCCCATTCTTACCTTCCAGGTTTGCTGAAGGAG...ACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp GGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTTGGGTTTCTTCTTTTTaGACATGGGACGACCCCGAG +
Preference number: 2 (lower is better)
Translates to: GMGKQFQTETTQKYHLAFWVSSF*TWDDPE
Trigger: CTCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCA...AAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR TCA 90 bp CATGGGCACAAACAGTCCATGAGATGCAGGTGTTTGGGACACACACTGAGACATCTACAATTCTCTAAGTaGTTTCCAGTGATGGAAACA +
Preference number: 2 (lower is better)
Translates to: HGHKQSMRCRCLGHTLRHLQFSK*FPVMET
Trigger: TGTTTCCATCACTGGAAATCACTTAGAGAATTGTAG...ATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCATGGACTGTTTGTGCCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594773.5
3UTR-3UTR TCA 90 bp TGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTCCCCCGTATAAAGATGCATTGATGAGATaGGACACCATGAATAACACA +
Preference number: 2 (lower is better)
Translates to: WYPSADLVITGNLSPPYKDALMR*DTMNNT
Trigger: TGTGTTATTCATGGTGTCTCATCTCATCAATGCATC...TTTATACGGGGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTGCTCAGTTCTGTGGCTaGTGCCCTAGCCACTGCTGT +
Preference number: 2 (lower is better)
Translates to: CLMITPHPIELFYTVAKIAQFCG*CPSHCC
Trigger: ACAGCAGTGGCTAGGGCATCAGCCACAGAACTGAGC...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR TCA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGAAGGAAAAGGATTTaGAGACCCTCACAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKRRKRI*RPSQRD
Trigger: GTCCCTTTGTGAGGGTCTTCAAATCCTTTTCCTTCT...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR TCA 90 bp CACTTAGCTTTTATGATGGTCACAAATGTGGCCAAAATGACCAGGGCCAACAAGGCCTGCTGGAGGTTATaGTCGGGGTTTAATAAACTT +
Preference number: 2 (lower is better)
Translates to: HLAFMMVTNVAKMTRANKACWRL*SGFNKL
Trigger: AAGTTTATTAAACCCCGATCATAACCTCCAGCAGGC...CTTGTTGGCCCTGGTCATTTTGGCCACATTTGTGACCATCATAAAAGCTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR GCA 90 bp TCTGCATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCTGTTTTAAGGGCAATTaGTGCTTCAAGGCTTATCTT +
Preference number: 2 (lower is better)
Translates to: SASSSVGTHRMCLLCAPACFKGN*CFKAYL
Trigger: AAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACA...GGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
3UTR-3UTR GCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTCTCCGCCCCAGAGACTaGAGAGACGTTTGTTTTCAT +
Preference number: 2 (lower is better)
Translates to: RDDVLRAIAASRLIFHISLRPRD*RDVCFH
Trigger: ATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAG...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTAGGCTTGAGCCACTGTaGCTGGCCCAAAGCCAGGAT +
Preference number: 2 (lower is better)
Translates to: CLMITPHPIELFYTVAKIRLEPL*LAQSQD
Trigger: ATCCTGGCTTTGGGCCAGGCACAGTGGCTCAAGCCT...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR CCA 90 bp CCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGAAAGCAGAACTATTTTaGTCATGTAGAAACCTCTCT +
Preference number: 2 (lower is better)
Translates to: PYVRKVQSLRGFTTPIPLKAELF*SCRNLS
Trigger: AGAGAGGTTTCTACATGACCAAAATAGTTCTGCTTT...CAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR GCA 90 bp ACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTTTTAAGGGCAATTGCTaGTTCAAGGCTTATCTTTCA +
Preference number: 2 (lower is better)
Translates to: TAETFVFMYTPNRTWALAFKGNC*FKAYLS
Trigger: TGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAA...AGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR GCA 90 bp CGATTTCATCTGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTGCTTTGGTACCCGAGTaGAGACTTGGTAATTACCGG +
Preference number: 2 (lower is better)
Translates to: RFHLFNDYSPPDRAILYCALVPE*RLGNYR
Trigger: CCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGC...ACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACAGATGAAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTATCAGCCAGAGGAGCTaGTTCCTCAGCACTCACAGG +
Preference number: 2 (lower is better)
Translates to: CLMITPHPIELFYTVAKIISQRS*FLSTHR
Trigger: CCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGAT...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp CAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATAGTTTGCTTACACTGTaGATTCTAAAGAGACATGTA +
Preference number: 2 (lower is better)
Translates to: QRASELWYPSADLVITGNSLLTL*ILKRHV
Trigger: TACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT...ATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTGAACAGTCCGTTTGCTaGTCATGTTATGTGGTAGGT +
Preference number: 2 (lower is better)
Translates to: NSGEQRENTICDRFHITFEQSVC*SCYVVG
Trigger: ACCTACCACATAACATGACCAGCAAACGGACTGTTC...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp AGTTTGCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCAAACTGGTTCATGGACTaGGGCTTGGAAAACAGTCAG +
Preference number: 2 (lower is better)
Translates to: SLLTLWILKRHVNLGPISNWFMD*GLENSQ
Trigger: CTGACTGTTTTCCAAGCCCCAGTCCATGAACCAGTT...TGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR GCA 90 bp GAGACATGTAAATCTGGGGCCGATTTCATCTGTTTAATGATTACTCCCCACCCGTGTTTTAAGGGCAATTaGTGCTTCAAGGCTTATCTT +
Preference number: 2 (lower is better)
Translates to: ETCKSGADFICLMITPHPCFKGN*CFKAYL
Trigger: AAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACA...CGGGTGGGGAGTAATCATTAAACAGATGAAATCGGCCCCAGATTTACATGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp GGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTCGAAGTCCAAGTCCTTaGGTTTCTTCTTTTTGGACA +
Preference number: 2 (lower is better)
Translates to: GMGKQFQTETTQKYHLAFRSPSP*VSSFWT
Trigger: TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCG...AAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR GCA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAATGTTTTAAGGGCAATTaGTGCTTCAAGGCTTATCTT +
Preference number: 2 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKCFKGN*CFKAYL
Trigger: AAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACA...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTCTAACAGAGCACTTCTaGAGAGCAATGGCCAGTCCA +
Preference number: 2 (lower is better)
Translates to: CLMITPHPIELFYTVAKILTEHF*RAMASP
Trigger: TGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGATCATCAACTCAAGTATaGCAACTGTTCAGAGAGCTT +
Preference number: 2 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRSSTQV*QLFREL
Trigger: AAGCTCTCTGAACAGTTGCCATACTTGAGTTGATGA...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp CCCCGTATAAATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACAGTTTGCTTACACTGTaGATTCTAAAGAGACATGTA +
Preference number: 2 (lower is better)
Translates to: PRINSGEQRENTICDRFHSLLTL*ILKRHV
Trigger: TACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT...GTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CAA 90 bp ATTGCAGGCCATAAGCAAAGGTGTGACACTCTTCAGAAGCCGGTCTaGAAGTCTCATTATGTACTTGTCAAAAGGCTTTATGATTTCAAA +
Preference number: 2 (lower is better)
Translates to: IAGHKQRCDTLQKPV*KSHYVLVKRLYDFK
Trigger: TTTGAAATCATAAAGCCTTTTGACAAGTACATAATGAGACTTCAAGACCGGCTTCTGAAGAGTGTCACACCTTTGCTTATGGCCTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR GCA 90 bp CACTTAGCTTTTATGATGGTCACAAATGTGGCCAAAATGACCAGGGCCAACAAGTATGGTGTGGAATCCTaGCCATTTGATTATTTCTAT +
Preference number: 2 (lower is better)
Translates to: HLAFMMVTNVAKMTRANKYGVES*PFDYFY
Trigger: ATAGAAATAATCAAATGGGCAGGATTCCACACCATA...CTTGTTGGCCCTGGTCATTTTGGCCACATTTGTGACCATCATAAAAGCTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CCA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGAAGTTTGCTTACACTGTaGATTCTAAAGAGACATGTA +
Preference number: 2 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRSLLTL*ILKRHV
Trigger: TACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CCA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTATGTTATGTGGTAGGTaGCTGTCATCTGTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: CLMITPHPIELFYTVAKIMLCGR*LSSVRE
Trigger: TTCTCTCACAGATGACAGCCACCTACCACATAACAT...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR GCA 72 bp CGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGGTGCTaGCCTCAGACTTGCCCGCCCCTCCAGGAGCGGGGG +
Preference number: 3 (lower is better)
Translates to: RQPRREGRRQGC*PQTCPPLQERG
Trigger: CCCCCGCTCCTGGAGGGGCGGGCAAGTCTGAGGGCAGCACCCCTGCCGACGGCCTTCCCGGCGAGGCTGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR GCA 72 bp CCTCGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGGTaGTGCCCTCAGACTTGCCCGCCCCTCCAGGAGCGG +
Preference number: 3 (lower is better)
Translates to: PRQPRREGRRQG*CPQTCPPLQER
Trigger: CCGCTCCTGGAGGGGCGGGCAAGTCTGAGGGCAGCACCCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR GCA 72 bp CTATCCCGGCTGGCCGGCAGCTGGCAGCACGCACCATaGTCTGCTGGCTCCCGACACCTTCACTGCCCCAGC +
Preference number: 3 (lower is better)
Translates to: LSRLAGSWQHAP*SAGSRHLHCPS
Trigger: GCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGGTGCGTGCTGCCAGCTGCCGGCCAGCCGGGATAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR GCA 72 bp GGCCTGGAGCCTGCCGGCCGTGGTGTTTCAGCCTGGTaGCTGAGGATAGGAGGGTCTGGGTCCCGGTGGTCG +
Preference number: 3 (lower is better)
Translates to: GLEPAGRGVSAW*LRIGGSGSRWS
Trigger: CGACCACCGGGACCCAGACCCTCCTATCCTCAGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCCAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 72 bp GGCACGGAGGGCCAGTGGCATCTCCTCTATCCCGGCTaGCCGGCAGCTGGCAGCACGCACCATGCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: GTEGQWHLLYPG*PAAGSTHHALL
Trigger: CAGCAGAGCATGGTGCGTGCTGCCAGCTGCCGGCCAGCCGGGATAGAGGAGATGCCACTGGCCCTCCGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CCA 72 bp GGCGTGGCCTATTTCCACACGCACATCCACGGAGGCTaGCCTGGAGGCCTTGAGGGGCTCACAGCCGGGGCA +
Preference number: 3 (lower is better)
Translates to: GVAYFHTHIHGG*PGGLEGLTAGA
Trigger: TGCCCCGGCTGTGAGCCCCTCAAGGCCTCCAGGCCAGCCTCCGTGGATGTGCGTGTGGAAATAGGCCACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR CCA 72 bp AGAGGCCTGGAGCCTGCCGGCCGTGGTGTTTCAGCCTaGTGCCTGAGGATAGGAGGGTCTGGGTCCCGGTGG +
Preference number: 3 (lower is better)
Translates to: RGLEPAGRGVSA*CLRIGGSGSRW
Trigger: CCACCGGGACCCAGACCCTCCTATCCTCAGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 72 bp GGAGCCCCCGCCGCTGCCACGGAAGGAGTTTCTTCTTaGGGTTGCGGACAGCCCGGGAGTACAGCATGGCCC +
Preference number: 3 (lower is better)
Translates to: GAPAAATEGVSS*GCGQPGSTAWP
Trigger: GGGCCATGCTGTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 72 bp GCTGCAGGTGTGTGCGCCTCGCTCGGGTCAATGGGCTaGGCCCCGCTTGGAGCTCCATCCATTCACCTGACC +
Preference number: 3 (lower is better)
Translates to: AAGVCASLGSMG*APLGAPSIHLT
Trigger: GGTCAGGTGAATGGATGGAGCTCCAAGCGGGGCTCAGCCCATTGACCCGAGCGAGGCGCACACACCTGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR GCA 72 bp CAGGGCGATGCTGGAGAGAGTGCGCTTGATCCACGCTaGAGGTGTGTGCGCCTCGCTCGGGTCAATGGGCTG +
Preference number: 3 (lower is better)
Translates to: QGDAGESALDPR*RCVRLARVNGL
Trigger: CAGCCCATTGACCCGAGCGAGGCGCACACACCTGCAGCGTGGATCAAGCGCACTCTCTCCAGCATCGCCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CCA 72 bp TCCACGCTGCAGGTGTGTGCGCCTCGCTCGGGTCAATaGGCTGAGCCCCGCTTGGAGCTCCATCCATTCACC +
Preference number: 3 (lower is better)
Translates to: STLQVCAPRSGQ*AEPRLELHPFT
Trigger: GGTGAATGGATGGAGCTCCAAGCGGGGCTCAGCCCATTGACCCGAGCGAGGCGCACACACCTGCAGCGTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CCA 72 bp TGGTGTTTCAGCCTGGTGCCTGAGGATAGGAGGGTCTaGGTCCCGGTGGTCGCTCTCCTCGCCTTCCAGCCC +
Preference number: 3 (lower is better)
Translates to: WCFSLVPEDRRV*VPVVALLAFQP
Trigger: GGGCTGGAAGGCGAGGAGAGCGACCACCGGGACCCAGACCCTCCTATCCTCAGGCACCAGGCTGAAACACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 72 bp TTGGGGGATGGGCCTGAGGCTTCTAAGCTGGGGTCCTaGGGAGAAGGTCCAACTGGGTCTGGCGGGCAGTCC +
Preference number: 3 (lower is better)
Translates to: LGDGPEASKLGS*GEGPTGSGGQS
Trigger: GGACTGCCCGCCAGACCCAGTTGGACCTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAGGCCCATCCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR GCA 72 bp CTGTGCCACCACACATCACGCGCGACACGAGGATCCTaGAGAGCGGCCTCTGCAGAGAGCAAGGACAGCCTC +
Preference number: 3 (lower is better)
Translates to: LCHHTSRATRGS*RAASAESKDSL
Trigger: GAGGCTGTCCTTGCTCTCTGCAGAGGCCGCTCTGCAGGATCCTCGTGTCGCGCGTGATGTGTGGTGGCACAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR GCA 72 bp GGCAGGGATGGTTTTGCCTGTGAGAGGCCTGGAGCCTaGCGGCCGTGGTGTTTCAGCCTGGTGCCTGAGGAT +
Preference number: 3 (lower is better)
Translates to: GRDGFACERPGA*RPWCFSLVPED
Trigger: ATCCTCAGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCTCACAGGCAAAACCATCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 72 bp TTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATaGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGA +
Preference number: 3 (lower is better)
Translates to: LGLCSGPWLARL*VPGNGKAVPDG
Trigger: TCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
3UTR CCA 72 bp CTGCTGGCTTGGGGGATGGGCCTGAGGCTTCTAAGCTaGGGTCCTGAGGAGAAGGTCCAACTGGGTCTGGCG +
Preference number: 3 (lower is better)
Translates to: LLAWGMGLRLLS*GPEEKVQLGLA
Trigger: CGCCAGACCCAGTTGGACCTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAGGCCCATCCCCCAAGCCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 72 bp TCAGCCAGAGGAGCTGGTTCCTCAGCACTCACAGGCTaGGGTGCCTTTCGGGGGCAGCGCCACCTTCTGAAG +
Preference number: 3 (lower is better)
Translates to: SARGAGSSALTG*GAFRGQRHLLK
Trigger: CTTCAGAAGGTGGCGCTGCCCCCGAAAGGCACCTCAGCCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR TCA 72 bp TGGGCTGAGCCCCGCTTGGAGCTCCATCCATTCACCTaGCCCATGGCCAACATGGAAGCTGTCGGAGGGGTC +
Preference number: 3 (lower is better)
Translates to: WAEPRLELHPFT*PMANMEAVGGV
Trigger: GACCCCTCCGACAGCTTCCATGTTGGCCATGGGTCAGGTGAATGGATGGAGCTCCAAGCGGGGCTCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR TCA 72 bp ATGGAATGGTCAGGGCGATGCTGGAGAGAGTGCGCTTaGTCCACGCTGCAGGTGTGTGCGCCTCGCTCGGGT +
Preference number: 3 (lower is better)
Translates to: MEWSGRCWRECA*STLQVCAPRSG
Trigger: ACCCGAGCGAGGCGCACACACCTGCAGCGTGGATCAAGCGCACTCTCTCCAGCATCGCCCTGACCATTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR GCA 72 bp CAGAGGAGCTGGTTCCTCAGCACTCACAGGCTGAGGTaGCTTTCGGGGGCAGCGCCACCTTCTGAAGGGGAA +
Preference number: 3 (lower is better)
Translates to: QRSWFLSTHRLR*LSGAAPPSEGE
Trigger: TTCCCCTTCAGAAGGTGGCGCTGCCCCCGAAAGGCACCTCAGCCTGTGAGTGCTGAGGAACCAGCTCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR GCA 72 bp ATCACGCGCGACACGAGGATCCTGCAGAGCGGCCTCTaGAGAGAGCAAGGACAGCCTCGGTTAAGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: ITRDTRILQSGL*REQGQPRLRGR
Trigger: CCTCCCTCTTAACCGAGGCTGTCCTTGCTCTCTGCAGAGGCCGCTCTGCAGGATCCTCGTGTCGCGCGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CCA 72 bp ATGGCCCTCACTGCACAGTCTGCTGAGGTCGGCTTCTaGTCGGCTCCTCGCAAGTTCTCGCTCATCCGCTGC +
Preference number: 3 (lower is better)
Translates to: MALTAQSAEVGF*SAPRKFSLIRC
Trigger: GCAGCGGATGAGCGAGAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGCAGACTGTGCAGTGAGGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 72 bp TGTGCACCTGAGCCCAGGGCCTGGCATGCCAGGAACTaGGCATGGGCACAAACAGTCCATGAGATGCAGGTG +
Preference number: 3 (lower is better)
Translates to: CAPEPRAWHARN*AWAQTVHEMQV
Trigger: CACCTGCATCTCATGGACTGTTTGTGCCCATGCCCAGTTCCTGGCATGCCAGGCCCTGGGCTCAGGTGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
3UTR-3UTR CAA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTCACACCAAACCGTACTaGGGCACTGGCTCCAGGCCG +
Preference number: 3 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIAHTKPY*GTGSRP
Trigger: CGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTG...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp GGCATCTCCTCTATCCCGGCTGGCCGGCAGCTGGCAGCACGCACCATGCTCTGCTACCCGAGTGCAGACTaGGTAATTACCGGGAATTTG +
Preference number: 3 (lower is better)
Translates to: GISSIPAGRQLAARTMLCYPSAD*VITGNL
Trigger: CAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTA...GCAGAGCATGGTGCGTGCTGCCAGCTGCCGGCCAGCCGGGATAGAGGAGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CCA 72 bp AGCCCCGCTTGGAGCTCCATCCATTCACCTGACCCATaGCCAACATGGAAGCTGTCGGAGGGGTCAGGAAAG +
Preference number: 3 (lower is better)
Translates to: SPAWSSIHSPDP*PTWKLSEGSGK
Trigger: CTTTCCTGACCCCTCCGACAGCTTCCATGTTGGCCATGGGTCAGGTGAATGGATGGAGCTCCAAGCGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CCA 72 bp TCCTCTCGCATCGGCTCTGGTTCGGCTTTCTTAACCTaGAGGGGACATCCGCTGCTGACTAGCCAGGCCTTC +
Preference number: 3 (lower is better)
Translates to: SSRIGSGSAFLT*RGHPLLTSQAF
Trigger: GAAGGCCTGGCTAGTCAGCAGCGGATGTCCCCTCCAGGTTAAGAAAGCCGAACCAGAGCCGATGCGAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 72 bp TCTGAGGTGCTTCAGAGATGTCCACTCCTGCTGGCTTaGGGGATGGGCCTGAGGCTTCTAAGCTGGGGTCCT +
Preference number: 3 (lower is better)
Translates to: SEVLQRCPLLLA*GMGLRLLSWGP
Trigger: AGGACCCCAGCTTAGAAGCCTCAGGCCCATCCCCCAAGCCAGCAGGAGTGGACATCTCTGAAGCACCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 72 bp CGGGCAGGGGACTGCAATGGGACAAGAGACCCGTTCTaGGAACAGGCTTCAGCTCTGCTGTACTGGTGGGTT +
Preference number: 3 (lower is better)
Translates to: RAGDCNGTRDPF*EQASALLYWWV
Trigger: AACCCACCAGTACAGCAGAGCTGAAGCCTGTTCCCAGAACGGGTCTCTTGTCCCATTGCAGTCCCCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CAA 90 bp TTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCCATGCGCATCTGCCCTaGGCCAGTGTGAGGTTTGCT +
Preference number: 3 (lower is better)
Translates to: FHVHTKPYLGTGSRPIQGHAHLP*ASVRFA
Trigger: AGCAAACCTCACACTGGCCAAGGGCAGATGCGCATG...GCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR GCA 72 bp CTCTGTGGCAGTGGCTGTCACAGTCGCCCTTCCACTTaGATGATGGCAAGGCCCTCTGGACTAGGAACAGTC +
Preference number: 3 (lower is better)
Translates to: LCGSGCHSRPST*MMARPSGLGTV
Trigger: GACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACTGTGACAGCCACTGCCACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR GCA 72 bp TGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTaGCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGG +
Preference number: 3 (lower is better)
Translates to: CRNTSNVSSLCS*PSAPNPSPSEG
Trigger: CCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
3UTR GCA 72 bp CACAAGCTGGTCGATGGTGCCCACTACCCTGTGATCTaGTCGCTGGGGGACAGCATCACTCAGACTACTTGG +
Preference number: 3 (lower is better)
Translates to: HKLVDGAHYPVI*SLGDSITQTTW
Trigger: CCAAGTAGTCTGAGTGATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCACCATCGACCAGCTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 72 bp CACTCCAGGCCCCCACAGGCTGGTTCGTTCGAGGGTTaGGTTATAAACCCAAACTCCATCCTCCATGCTGGC +
Preference number: 3 (lower is better)
Translates to: HSRPPQAGSFEG*VINPNSILHAG
Trigger: GCCAGCATGGAGGATGGAGTTTGGGTTTATAACCCAACCCTCGAACGAACCAGCCTGTGGGGGCCTGGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CCA 72 bp GGGACCCTGGCTGGCCCGGCTATGGGTTCCCGGGAATaGGAAAGCAGTTCCAGACGGAAACTACACAGAAAT +
Preference number: 3 (lower is better)
Translates to: GTLAGPAMGSRE*ESSSRRKLHRN
Trigger: ATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCAGGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR CAA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACACACCAAACCGTACTaGGGCACTGGCTCCAGGCCG +
Preference number: 3 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVHTKPY*GTGSRP
Trigger: CGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTG...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR TCA 72 bp ACCAGGCAGGCCATGCGCATCTGCCCTTGGCCAGTGTaGGGTTTGCTCCTTCAGCAAACCTGGAAGGTAAGA +
Preference number: 3 (lower is better)
Translates to: TRQAMRICPWPV*GLLLQQTWKVR
Trigger: TCTTACCTTCCAGGTTTGCTGAAGGAGCAAACCTCACACTGGCCAAGGGCAGATGCGCATGGCCTGCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR GCA 72 bp GGACAAGAGACCCGTTCTGGGAACAGGCTTCAGCTCTaGTGTACTGGTGGGTTCTCGCCTCTTTTGGCTCCT +
Preference number: 3 (lower is better)
Translates to: GQETRSGNRLQL*CTGGFSPLLAP
Trigger: AGGAGCCAAAAGAGGCGAGAACCCACCAGTACAGCAGAGCTGAAGCCTGTTCCCAGAACGGGTCTCTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR CCA 72 bp TTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTaGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAG +
Preference number: 3 (lower is better)
Translates to: FNKLWACVRDPG*PGYGFPGMGKQ
Trigger: CTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
3UTR CCA 72 bp GAGGAGAAGGTCCAACTGGGTCTGGCGGGCAGTCCTTaGCAGCATCATTTCTGTCTGGCAGGGATGGTTTTG +
Preference number: 3 (lower is better)
Translates to: EEKVQLGLAGSP*QHHFCLAGMVL
Trigger: CAAAACCATCCCTGCCAGACAGAAATGATGCTGCCAAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 72 bp CCGTTCTGGGAACAGGCTTCAGCTCTGCTGTACTGGTaGGTTCTCGCCTCTTTTGGCTCCTGGATGAGACAC +
Preference number: 3 (lower is better)
Translates to: PFWEQASALLYW*VLASFGSWMRH
Trigger: GTGTCTCATCCAGGAGCCAAAAGAGGCGAGAACCCACCAGTACAGCAGAGCTGAAGCCTGTTCCCAGAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CAA 90 bp GCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTTCTGGCGGGCAGTCCTaGGCAGCATCATTTCTGTCT +
Preference number: 3 (lower is better)
Translates to: AQVLIGQLLLGEVQVLGFSGGQS*AASFLS
Trigger: AGACAGAAATGATGCTGCCAAGGACTGCCCGCCAGA...AAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR GCA 72 bp AACGACAGAAAAGACACTGTGACTTTGACACGGCTGTaGCACCACACATCACGCGCGACACGAGGATCCTGC +
Preference number: 3 (lower is better)
Translates to: NDRKDTVTLTRL*HHTSRATRGSC
Trigger: GCAGGATCCTCGTGTCGCGCGTGATGTGTGGTGGCACAGCCGTGTCAAAGTCACAGTGTCTTTTCTGTCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR GCA 72 bp ATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTaGTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCC +
Preference number: 3 (lower is better)
Translates to: ILCRNTSNVSSL*SCPSAPNPSPS
Trigger: GGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
3UTR GCA 72 bp GAAAACAGTCAGTGGTTGCTGAATCGGGCAGGGGACTaGAATGGGACAAGAGACCCGTTCTGGGAACAGGCT +
Preference number: 3 (lower is better)
Translates to: ENSQWLLNRAGD*NGTRDPFWEQA
Trigger: AGCCTGTTCCCAGAACGGGTCTCTTGTCCCATTGCAGTCCCCTGCCCGATTCAGCAACCACTGACTGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR CCA 72 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTaGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATG +
Preference number: 3 (lower is better)
Translates to: ETFVFMYTPNRT*ALAPGRSRAGM
Trigger: CATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CCA 72 bp AATGGCCAGTCCAACTGGAAAATCAGCCAGAGGAGCTaGTTCCTCAGCACTCACAGGCTGAGGTGCCTTTCG +
Preference number: 3 (lower is better)
Translates to: NGQSNWKISQRS*FLSTHRLRCLS
Trigger: CGAAAGGCACCTCAGCCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGATTTTCCAGTTGGACTGGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CCA 72 bp CCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTGGTaGTTTCTAGGGCAAGAGCCAAGTCCAGGGGGTTAC +
Preference number: 3 (lower is better)
Translates to: PKGPKTSGRESW*FLGQEPSPGGY
Trigger: GTAACCCCCTGGACTTGGCTCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 72 bp AGGGGACATCCGCTGCTGACTAGCCAGGCCTTCAGGTaGTCTATGTACTCTCGCCCAAACAAAGTGGAGTCT +
Preference number: 3 (lower is better)
Translates to: RGHPLLTSQAFR*SMYSRPNKVES
Trigger: AGACTCCACTTTGTTTGGGCGAGAGTACATAGACCACCTGAAGGCCTGGCTAGTCAGCAGCGGATGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 72 bp TTCAGCTCTGCTGTACTGGTGGGTTCTCGCCTCTTTTaGCTCCTGGATGAGACACACTCTCTTGGGAGCTGG +
Preference number: 3 (lower is better)
Translates to: FSSAVLVGSRLF*LLDETHSLGSW
Trigger: CCAGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGAGGCGAGAACCCACCAGTACAGCAGAGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CAA 90 bp GCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTCACACCAAACCGTACTaGGGCACTGGCTCCAGGCCG +
Preference number: 3 (lower is better)
Translates to: ASELWYPSADLVITGNLSHTKPY*GTGSRP
Trigger: CGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTG...AGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR TCA 72 bp CTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGCTGCTTCAAGGCTTAT +
Preference number: 3 (lower is better)
Translates to: LGHWLQADPGQG*CFKGNCCFKAY
Trigger: ATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR GCA 72 bp AGCAGGGAACATCAACTTTGTTGGGGGAAATTTCTCTaGATACCAGCACGCCAGCGAGGGCAGACGGCCTTA +
Preference number: 3 (lower is better)
Translates to: SREHQLCWGKFL*IPARQRGQTAL
Trigger: TAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACAAAGTTGATGTTCCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR CCA 72 bp CAGTCGCCCTTCCACTTGCATGATGGCAAGGCCCTCTaGACTAGGAACAGTCCGTTTGCTGGTCATGTTATG +
Preference number: 3 (lower is better)
Translates to: QSPFHLHDGKAL*TRNSPFAGHVM
Trigger: CATAACATGACCAGCAAACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR CCA 72 bp AGGAGGAATCATTTTCTCCTCCTCTCGCATCGGCTCTaGTTCGGCTTTCTTAACCTGGAGGGGACATCCGCT +
Preference number: 3 (lower is better)
Translates to: RRNHFLLLSHRL*FGFLNLEGTSA
Trigger: AGCGGATGTCCCCTCCAGGTTAAGAAAGCCGAACCAGAGCCGATGCGAGAGGAGGAGAAAATGATTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 72 bp ATCTGCTCGCTGGGGGACAGCATCACTCAGACTACTTaGAGCCTTGGCCTGAATTTCAGGTTTCGTAGGAGG +
Preference number: 3 (lower is better)
Translates to: ICSLGDSITQTT*SLGLNFRFRRR
Trigger: CCTCCTACGAAACCTGAAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGATGCTGTCCCCCAGCGAGCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 72 bp CTGCTGTACTGGTGGGTTCTCGCCTCTTTTGGCTCCTaGATGAGACACACTCTCTTGGGAGCTGGAATCATG +
Preference number: 3 (lower is better)
Translates to: LLYWWVLASFGS*MRHTLLGAGIM
Trigger: CATGATTCCAGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGAGGCGAGAACCCACCAGTACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CAA 90 bp CCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGACTGGAGAGAGTGCGCTaGATCCACGCTGCAGGTGTG +
Preference number: 3 (lower is better)
Translates to: PLLTKAVIRQHLTMPYVRLERVR*IHAAGV
Trigger: CACACCTGCAGCGTGGATCAAGCGCACTCTCTCCAG...TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR-3UTR CAA 90 bp TGCCTTTCGGGGGCAGCGCCACCTTCTGAAGGGGAACCAAGACAGATTTGGAGGTCTGTGAGAGAAAACTaGAGCAAGAGAAGAGACAGG +
Preference number: 3 (lower is better)
Translates to: CLSGAAPPSEGEPRQIWRSVREN*SKRRDR
Trigger: CCTGTCTCTTCTCTTGCTCAAGTTTTCTCTCACAGA...CCTCCAAATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCCCCCGAAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp TTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGTCGAATGTGTCTTCTTaGTGCTCCTGCCCGTCAGCA +
Preference number: 3 (lower is better)
Translates to: FGHGTTPRPVIGNSNWFMSNVSS*CSCPSA
Trigger: TGCTGACGGGCAGGAGCACAAAGAAGACACATTCGA...CATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
3UTR-3UTR CAA 90 bp AATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGTATTTGTTGGCCCGCTaGTGTCTGTACATCTGCATC +
Preference number: 3 (lower is better)
Translates to: NVSSLCSCPSAPNPSPSEYLLAR*CLYICI
Trigger: GATGCAGATGTACAGACACAAGCGGGCCAACAAATA...CTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
3UTR TCA 72 bp ATTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGCTGCTTCAAGGCTTAT +
Preference number: 3 (lower is better)
Translates to: IGHWLQADPGQG*CFKGNCCFKAY
Trigger: ATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594773.5
3UTR TCA 72 bp GAAGAGTTCTCTCTTTGGGAGACAGGCTGCCTTCGATaGCACGTTTCACAAGCTGGTCGATGGTGCCCACTA +
Preference number: 3 (lower is better)
Translates to: EEFSLWETGCLR*HVSQAGRWCPL
Trigger: TAGTGGGCACCATCGACCAGCTTGTGAAACGTGTCATCGAAGGCAGCCTGTCTCCCAAAGAGAGAACTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 72 bp CACTCTCTTGGGAGCTGGAATCATGCCAACCTTCAATaGCTTGCTGCTGATCCTCTTCCGAGGGAAGCAGGT +
Preference number: 3 (lower is better)
Translates to: HSLGSWNHANLQ*LAADPLPREAG
Trigger: ACCTGCTTCCCTCGGAAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR TCA 72 bp TGTACTGGTGGGTTCTCGCCTCTTTTGGCTCCTGGATaGGACACACTCTCTTGGGAGCTGGAATCATGCCAA +
Preference number: 3 (lower is better)
Translates to: CTGGFSPLLAPG*DTLSWELESCQ
Trigger: TTGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGAGGCGAGAACCCACCAGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CAA 90 bp GGTGCCCACTACCCTGTGATCTGCTCGCTGGGGGACAGCATCACTCAGACTACTCTTCAGAAGCCGGTCTaGAAGTCTCATTATGTACTT +
Preference number: 3 (lower is better)
Translates to: GAHYPVICSLGDSITQTTLQKPV*KSHYVL
Trigger: AAGTACATAATGAGACTTCAAGACCGGCTTCTGAAG...AGTAGTCTGAGTGATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CAA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATGAGACACACTCTCTaGGGAGCTGGAATCATGCCA +
Preference number: 3 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTEMRHTL*GAGIMP
Trigger: TGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCAT...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR CAA 90 bp TTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGTTCATGGACTGGGGCTaGGAAAACAGTCAGTGGTTG +
Preference number: 3 (lower is better)
Translates to: FGHGTTPRPVIGNSNWFMFMDWG*ENSQWL
Trigger: CAACCACTGACTGTTTTCCAAGCCCCAGTCCATGAA...CATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CAA 90 bp AGTCGCCCTTCCACTTGCATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTGGAACATCAACTTTGTaGGGGGAAATTTCTCTGCAT +
Preference number: 3 (lower is better)
Translates to: SRPSTCMMARPSGLGTVRGTSTL*GEISLH
Trigger: ATGCAGAGAAATTTCCCCCAACAAAGTTGATGTTCC...ACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGCAGGGAACATCAACTTaGTTGGGGGAAATTTCTCTG +
Preference number: 3 (lower is better)
Translates to: WRIEWSYTQQSAGESGERQGTST*LGEISL
Trigger: CAGAGAAATTTCCCCCAACAAAGTTGATGTTCCCTG...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601879.5
3UTR-3UTR CAA 90 bp GGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTCGAATGTGTCTTCTTaGTGCTCCTGCCCGTCAGCA +
Preference number: 3 (lower is better)
Translates to: GNCSESFRALVPECRLGNSNVSS*CSCPSA
Trigger: TGCTGACGGGCAGGAGCACAAAGAAGACACATTCGA...ATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CAA 90 bp CTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCGTTTTGATCTATTTGTaGGCCCGCTTGTGTCTGTAC +
Preference number: 3 (lower is better)
Translates to: LCRNTSNVSSLCSCPSAPVLIYL*ARLCLY
Trigger: GTACAGACACAAGCGGGCCAACAAATAGATCAAAAC...GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
3UTR-3UTR CAA 90 bp CCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGTGGTTTTGATCTATTaGTTGGCCCGCTTGTGTCTG +
Preference number: 3 (lower is better)
Translates to: PQEEPASPYKGCNKTALDVVLIY*LARLCL
Trigger: CAGACACAAGCGGGCCAACAAATAGATCAAAACCAC...GTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CAA 90 bp ATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCTTCCGGCAGAGAGAGTaGGTGGTTTCTAGGGCAAGA +
Preference number: 3 (lower is better)
Translates to: MGSREWESSSRRKLHRNTFRQRE*VVSRAR
Trigger: TCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGAA...GGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR GCA 72 bp AGCATCTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTaGTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTT +
Preference number: 3 (lower is better)
Translates to: SIWKPRFLSVSF*WAKSKSLGFFF
Trigger: AAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597280.5
ENST00000598240.1
ENST00000600239.5
3UTR CCA 72 bp CGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATaGGACGACCCCGAGGCCTGTCATAGGCAATTCGAA +
Preference number: 3 (lower is better)
Translates to: RSPSPWVSSFWT*DDPEACHRQFE
Trigger: TTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597280.5
ENST00000598240.1
ENST00000600239.5
3UTR CCA 72 bp AGGCCTGTCATAGGCAATTCGAACTGGTTCATGGACTaGGGCTTGGAAAACAGTCAGTGGTTGCTGAATCGG +
Preference number: 3 (lower is better)
Translates to: RPVIGNSNWFMD*GLENSQWLLNR
Trigger: CCGATTCAGCAACCACTGACTGTTTTCCAAGCCCCAGTCCATGAACCAGTTCGAATTGCCTATGACAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CAA 90 bp CCCCGTATAAATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACAAGGAGATGTGCCCTTaGACCCCTGCCAAGGACTCA +
Preference number: 3 (lower is better)
Translates to: PRINSGEQRENTICDRFHKEMCP*TPAKDS
Trigger: TGAGTCCTTGGCAGGGGTCAAAGGGCACATCTCCTT...GTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR-3UTR CAA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCTACCCGAGTGCAGACTaGGTAATTACCGGGAATTTG +
Preference number: 3 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGYPSAD*VITGNL
Trigger: CAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTA...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp CTTTACAGCCAATACAAGTGGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTATTGTGTGTGGCATTTTaGGGGGAGCAGGGAACATCA +
Preference number: 3 (lower is better)
Translates to: LYSQYKWHFPLSSVADALLCVAF*GEQGTS
Trigger: TGATGTTCCCTGCTCCCCCAAAAATGCCACACACAA...TAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601879.5
3UTR-3UTR CAA 90 bp CTGGGGAATCTGGAGAGCGGGGGCGATCACATGCCTGGAAATAGAGCAGCTGCATTCACATCAGTGGTTTaGATCTATTCAGGAAGAGAA +
Preference number: 3 (lower is better)
Translates to: LGNLESGGDHMPGNRAAAFTSVV*IYSGRE
Trigger: TTCTCTTCCTGAATAGATCAAAACCACTGATGTGAA...TGCAGCTGCTCTATTTCCAGGCATGTGATCGCCCCCGCTCTCCAGATTCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601879.5
3UTR-3UTR CAA 90 bp CCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTATTTGTTGGCCCGCTaGTGTCTGTACATCTGCATC +
Preference number: 3 (lower is better)
Translates to: PYVRKVQSLRGFTTPIPLYLLAR*CLYICI
Trigger: GATGCAGATGTACAGACACAAGCGGGCCAACAAATA...CAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CAA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAGTTTTCTATGCTGAATaGTTCGATCTCTGGTCCCAC +
Preference number: 3 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTEVFYAE*FDLWSH
Trigger: GTGGGACCAGAGATCGAACAATTCAGCATAGAAAAC...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR GCA 72 bp AACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTaGAGACTTGGTAATTACCGGGAATTTGTCTCCCCC +
Preference number: 3 (lower is better)
Translates to: NCSESFRALVPE*RLGNYREFVSP
Trigger: GGGGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CCA 72 bp ATCTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTaGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTG +
Preference number: 3 (lower is better)
Translates to: IWKPRFLSVSFC*AKSKSLGFFFL
Trigger: CAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597280.5
ENST00000598240.1
ENST00000600239.5
3UTR-3UTR CAA 90 bp ATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCGTTTCCACATCACGTTaGCTAACAGAGCACTTCTGG +
Preference number: 3 (lower is better)
Translates to: MGSREWESSSRRKLHRNTVSTSR*LTEHFW
Trigger: CCAGAAGTGCTCTGTTAGCAAACGTGATGTGGAAAC...GGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CAA 90 bp CAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTACCCGAGTGCAGACTaGGTAATTACCGGGAATTTG +
Preference number: 3 (lower is better)
Translates to: QRASELWYPSADLVITGNYPSAD*VITGNL
Trigger: CAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTA...ATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp CTCTCGGGGGTGACCCTGGAACTAGAACGACAGAAAAGACACTGTGACTTTGACATAAAGATCTGCCAGTaGCCAAAGCTACAGAAGCCA +
Preference number: 3 (lower is better)
Translates to: LSGVTLELERQKRHCDFDIKICQ*PKLQKP
Trigger: TGGCTTCTGTAGCTTTGGCAACTGGCAGATCTTTAT...GTCAAAGTCACAGTGTCTTTTCTGTCGTTCTAGTTCCAGGGTCACCCCCGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR TCA 72 bp ACCACAGGTCAGGGTTATCGGTGCTGTTTTCTATGCTaGATTGTTCGATCTCTGGTCCCACCTGAGCAACAA +
Preference number: 3 (lower is better)
Translates to: TTGQGYRCCFLC*IVRSLVPPEQQ
Trigger: TTGTTGCTCAGGTGGGACCAGAGATCGAACAATTCAGCATAGAAAACAGCACCGATAACCCTGACCTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 72 bp CAATTCGAACTGGTTCATGGACTTTTGGCTCCTGGATaGGACACACTCTCTTGGGAGCTGGAATCATGCCAA +
Preference number: 3 (lower is better)
Translates to: QFELVHGLLAPG*DTLSWELESCQ
Trigger: TTGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGTCCATGAACCAGTTCGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 72 bp ATCGTTTCCACATCACGTTTGCTAACAGAGCACTTCTaGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCC +
Preference number: 3 (lower is better)
Translates to: IVSTSRLLTEHF*RAMASPTGKSA
Trigger: GGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAGCAAACGTGATGTGGAAACGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp TGGTGGGTTCTCGCCTCTTTTGGCTCCTGGATGAGACACACTCTCTTGGGAGCTAGAGGCAAAAGCACATaGAAAATGGTGCATGTTTTT +
Preference number: 3 (lower is better)
Translates to: WWVLASFGSWMRHTLLGARGKST*KMVHVF
Trigger: AAAAACATGCACCATTTTCAATGTGCTTTTGCCTCT...AGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGAGGCGAGAACCCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CAA 90 bp ACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAGATTTGGAGGGGACTaGCTGCTAAAAGCATGTGAA +
Preference number: 3 (lower is better)
Translates to: TALDDAIRAKSAESQRVYRFGGD*LLKACE
Trigger: TTCACATGCTTTTAGCAGCAAGTCCCCTCCAAATCT...GTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp AAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCAGATTTGGAGGGGACTaGCTGCTAAAAGCATGTGAA +
Preference number: 3 (lower is better)
Translates to: KPPPQRLQRRLFSCTHQTRFGGD*LLKACE
Trigger: TTCACATGCTTTTAGCAGCAAGTCCCCTCCAAATCT...GGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCGTAATTACCGGGAATTaGTCTCCCCCGTATAAATTC +
Preference number: 3 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGVITGN*SPPYKF
Trigger: GAATTTATACGGGGGAGACAAATTCCCGGTAATTAC...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp GCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTGTAATAAGACAGCACTaGACGATGCCATACGTGCGA +
Preference number: 3 (lower is better)
Translates to: ASELWYPSADLVITGNLSVIRQH*TMPYVR
Trigger: TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTAC...AGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTCACACCAAACCGTACTaGGGCACTGGCTCCAGGCCG +
Preference number: 3 (lower is better)
Translates to: CLMITPHPIELFYTVAKIHTKPY*GTGSRP
Trigger: CGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTG...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp CGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTAACTAGACTGCAGAGACGTTaGTTTTCATGTACACACCAA +
Preference number: 3 (lower is better)
Translates to: RAKSAESQRVYNPHPFVTRLQRR*FSCTHQ
Trigger: TTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCT...AGTTACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp CCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTAGACTGCAGAGACGTTaGTTTTCATGTACACACCAA +
Preference number: 3 (lower is better)
Translates to: PPQRLQRRLFSCTHQTVLRLQRR*FSCTHQ
Trigger: TTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCT...AAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp TGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACAGAGGCAAAAGCACATaGAAAATGGTGCATGTTTTT +
Preference number: 3 (lower is better)
Translates to: CRNTSNVSSLCSCPSAPNRGKST*KMVHVF
Trigger: AAAAACATGCACCATTTTCAATGTGCTTTTGCCTCT...GTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
3UTR-3UTR CAA 90 bp CGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCAGAGGCAAAAGCACATaGAAAATGGTGCATGTTTTT +
Preference number: 3 (lower is better)
Translates to: RCHTCEKCRVSEGLQPPSRGKST*KMVHVF
Trigger: AAAAACATGCACCATTTTCAATGTGCTTTTGCCTCT...GGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTAGATTTGGAGGGGACTaGCTGCTAAAAGCATGTGAA +
Preference number: 3 (lower is better)
Translates to: ATVQRASELWYPSADLVIRFGGD*LLKACE
Trigger: TTCACATGCTTTTAGCAGCAAGTCCCCTCCAAATCT...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp CCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACCTTTGTAACTGTAGTTaGCTTACACTGTGGATTCTA +
Preference number: 3 (lower is better)
Translates to: PQEEPASPYKGCNKTALDLCNCS*LTLWIL
Trigger: TAGAATCCACAGTGTAAGCAAACTACAGTTACAAAG...GTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR CAA 90 bp CGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTAACTGTAGTTaGCTTACACTGTGGATTCTA +
Preference number: 3 (lower is better)
Translates to: RCHTCEKCRVSEGLQPPSLCNCS*LTLWIL
Trigger: TAGAATCCACAGTGTAAGCAAACTACAGTTACAAAG...GGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp TTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGTGGAATCCTGCCCATTaGATTATTTCTATCCCAAAT +
Preference number: 3 (lower is better)
Translates to: FGHGTTPRPVIGNSNWFMWNPAH*IISIPN
Trigger: ATTTGGGATAGAAATAATCAAATGGGCAGGATTCCA...CATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR GCA 72 bp GGCTCCTCGCAAGTTCTCGCTCATCCGCTGCATTTCTaGCAACTTCAGCTTGTAATATTTATACTCCAGACT +
Preference number: 3 (lower is better)
Translates to: GSSQVLAHPLHF*QLQLVIFILQT
Trigger: AGTCTGGAGTATAAATATTACAAGCTGAAGTTGGCAGAAATGCAGCGGATGAGCGAGAACTTGCGAGGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR CCA 72 bp GGAACAGTCCGTTTGCTGGTCATGTTATGTGGTAGGTaGCTGTCATCTGTGAGAGAAAACTTGAGCAAGAGA +
Preference number: 3 (lower is better)
Translates to: GTVRLLVMLCGR*LSSVRENLSKR
Trigger: TCTCTTGCTCAAGTTTTCTCTCACAGATGACAGCCACCTACCACATAACATGACCAGCAAACGGACTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp ACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTAGACTGCAGAGACGTTaGTTTTCATGTACACACCAA +
Preference number: 3 (lower is better)
Translates to: TAETFVFMYTPNRTWALARLQRR*FSCTHQ
Trigger: TTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCT...AGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTAGGATGAGTGGAGAATaGAGTGGAGTTACACGCAGC +
Preference number: 3 (lower is better)
Translates to: NSGEQRENTICDRFHITFRMSGE*SGVTRS
Trigger: GCTGCGTGTAACTCCACTCAATTCTCCACTCATCCT...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR CAA 90 bp GCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTGGAACATCAACTTTGTaGGGGGAAATTTCTCTGCAT +
Preference number: 3 (lower is better)
Translates to: ASELWYPSADLVITGNLSGTSTL*GEISLH
Trigger: ATGCAGAGAAATTTCCCCCAACAAAGTTGATGTTCC...AGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR TCA 72 bp TTTTCTATGCTGAATTGTTCGATCTCTGGTCCCACCTaGGCAACAAATCTAGCCAGTTTCTCTGCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: FSMLNCSISGPT*ATNLASFSAVS
Trigger: GGAGACTGCAGAGAAACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTCAGCATAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR GCA 72 bp TTGATCTATTTGTTGGCCCGCTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAACACATCGAATGTGTCT +
Preference number: 3 (lower is better)
Translates to: LIYLLARLCLYI*IILCRNTSNVS
Trigger: AGACACATTCGATGTGTTCCGACAGAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
3UTR CCA 72 bp ATCGGTGCTGTTTTCTATGCTGAATTGTTCGATCTCTaGTCCCACCTGAGCAACAAATCTAGCCAGTTTCTC +
Preference number: 3 (lower is better)
Translates to: IGAVFYAELFDL*SHLSNKSSQFL
Trigger: GAGAAACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTCAGCATAGAAAACAGCACCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CAA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTTACCCGAGTGCAGACTaGGTAATTACCGGGAATTTG +
Preference number: 3 (lower is better)
Translates to: NSGEQRENTICDRFHITFYPSAD*VITGNL
Trigger: CAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTA...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTGTAATAAGACAGCACTaGACGATGCCATACGTGCGA +
Preference number: 3 (lower is better)
Translates to: NSGEQRENTICDRFHITFVIRQH*TMPYVR
Trigger: TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTAC...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp ACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACTTCACATCAGTGGTTTaGATCTATTCAGGAAGAGAA +
Preference number: 3 (lower is better)
Translates to: TALDDAIRAKSAESQRVYFTSVV*IYSGRE
Trigger: TTCTCTTCCTGAATAGATCAAAACCACTGATGTGAA...GTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp ATGTCTGTCCCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTGGTGGTTTCTAGTCTTCACAGCACCTTaGTCTAAAAGCATGTTTAAA +
Preference number: 3 (lower is better)
Translates to: MSVPKGPKTSGRESWWFLVFTAP*SKSMFK
Trigger: TTTAAACATGCTTTTAGACAAAGGTGCTGTGAAGAC...TAGAAACCACCAACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR TCA 72 bp CACCACCACCAGTGTGAAGGTTGTGCGGAGATGACGTaGAACAAATTGATGGACATAGTTCAAACACTTTCT +
Preference number: 3 (lower is better)
Translates to: HHHQCEGCAEMT*NKLMDIVQTLS
Trigger: AGAAAGTGTTTGAACTATGTCCATCAATTTGTTTCACGTCATCTCCGCACAACCTTCACACTGGTGGTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR CCA 72 bp CCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTaGATTCTAAAGAGACATGTAAATCTGGGGCCGATT +
Preference number: 3 (lower is better)
Translates to: PPSLCNCSLLTL*ILKRHVNLGPI
Trigger: AATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGACAGAAGGAAAAGGATTaGAAGACCCTCACAAAGGGA +
Preference number: 3 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRQKEKD*KTLTKG
Trigger: TCCCTTTGTGAGGGTCTTCAAATCCTTTTCCTTCTG...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTCAGAAGGAAAAGGATTaGAAGACCCTCACAAAGGGA +
Preference number: 3 (lower is better)
Translates to: NSGEQRENTICDRFHITFQKEKD*KTLTKG
Trigger: TCCCTTTGTGAGGGTCTTCAAATCCTTTTCCTTCTG...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp GAGACATGTAAATCTGGGGCCGATTTCATCTGTTTAATGATTACTCCCCACCCGAGGAAGAGAACGATTTaGTTCAAAACTGAGGTGGAA +
Preference number: 3 (lower is better)
Translates to: ETCKSGADFICLMITPHPRKRTI*FKTEVE
Trigger: TTCCACCTCAGTTTTGAACAAAATCGTTCTCTTCCT...CGGGTGGGGAGTAATCATTAAACAGATGAAATCGGCCCCAGATTTACATGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTTTCACATCAGTGGTTTaGATCTATTTGTTGGCCCGC +
Preference number: 3 (lower is better)
Translates to: NSGEQRENTICDRFHITFFTSVV*IYLLAR
Trigger: GCGGGCCAACAAATAGATCAAAACCACTGATGTGAA...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR GCA 72 bp CCAGATTTTTGCCCATACTTAAAACTTCAACGATCCTaGTTCACAAGGAAGGATGAGTGGAGAATTGAGTGG +
Preference number: 3 (lower is better)
Translates to: PDFCPYLKLQRS*FTRKDEWRIEW
Trigger: CCACTCAATTCTCCACTCATCCTTCCTTGTGAAGCAGGATCGTTGAAGTTTTAAGTATGGGCAAAAATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
3UTR-3UTR CAA 90 bp CCCCGTATAAATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACAGAGGCAAAAGCACATaGAAAATGGTGCATGTTTTT +
Preference number: 3 (lower is better)
Translates to: PRINSGEQRENTICDRFHRGKST*KMVHVF
Trigger: AAAAACATGCACCATTTTCAATGTGCTTTTGCCTCT...GTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp CCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTCATTAAGTCTCTCAATGAGATGCAGGTGTTaGGGACACACACTGAGACAT +
Preference number: 3 (lower is better)
Translates to: PHPIELFYTVAKISLSLSMRCRC*GHTLRH
Trigger: ATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCAT...TGAGAGACTTAATGAAATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
3UTR-3UTR CAA 90 bp CCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTCATTAAGTCTCTCAAGATTTGGAGGGGACTaGCTGCTAAAAGCATGTGAA +
Preference number: 3 (lower is better)
Translates to: PHPIELFYTVAKISLSLSRFGGD*LLKACE
Trigger: TTCACATGCTTTTAGCAGCAAGTCCCCTCCAAATCT...TGAGAGACTTAATGAAATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR TCA 72 bp ATAAGCAAAGGTGTGACACTCTTCAGAAGCCGGTCTTaGAGTCTCATTATGTACTTGTCAAAAGGCTTTATG +
Preference number: 3 (lower is better)
Translates to: ISKGVTLFRSRS*SLIMYLSKGFM
Trigger: CATAAAGCCTTTTGACAAGTACATAATGAGACTTCAAGACCGGCTTCTGAAGAGTGTCACACCTTTGCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
3UTR-3UTR CAA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTGTAATTACCGGGAATTaGTCTCCCCCGTATAAATTC +
Preference number: 3 (lower is better)
Translates to: CLMITPHPIELFYTVAKIVITGN*SPPYKF
Trigger: GAATTTATACGGGGGAGACAAATTCCCGGTAATTAC...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR-3UTR CAA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTAGGAAGAGAACGATTTaGTTCAAAACTGAGGTGGAA +
Preference number: 3 (lower is better)
Translates to: CLMITPHPIELFYTVAKIRKRTI*FKTEVE
Trigger: TTCCACCTCAGTTTTGAACAAAATCGTTCTCTTCCT...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AGCTGGCAGCACGCACCATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCCAGCCCCGGAGCCCTTaGGCACGGAGGAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: SWQHAPCSAGSRHLHCPSQPRSP*ARRSPR
Trigger: GCGGGGGCTCCTCCGTGCTCAAGGGCTCCGGGGCTG...GCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGGTGCGTGCTGCCAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp GGTGCTCCAGCCAGGTCGTCCTCGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGAGGTCCAACTGGGTCTaGCGGGCAGTCCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GAPARSSSAASPGRPSAGRSNWV*RAVLGS
Trigger: GCTGCCAAGGACTGCCCGCCAGACCCAGTTGGACCT...CCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGGACGACCTGGCTGGAGCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GTGCTCCAGCCAGGTCGTCCTCGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGGCTCAGGCATCACCTCTaGGCTCTCCAGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VLQPGRPRQPRREGRRQGLRHHL*ALQLSL
Trigger: GAGGCTGAGCTGGAGAGCCCAGAGGTGATGCCTGAG...CCCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGGACGACCTGGCTGGAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp GTGCTCCAGCCAGGTCGTCCTCGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGGATTTCCGGTGGCCAATaGCCTGGTCCCGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: VLQPGRPRQPRREGRRQGISGGQ*PGPENQ
Trigger: CTGATTCTCGGGACCAGGTCATTGGCCACCGGAAAT...CCCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGGACGACCTGGCTGGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp ACATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACAGGACAGCCCCGGAGCCCTTaGGCACGGAGGAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: TCSAGSRHLHCPSAESTGQPRSP*ARRSPR
Trigger: GCGGGGGCTCCTCCGTGCTCAAGGGCTCCGGGGCTG...TCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR CCA 90 bp GTGCTCCAGCCAGGTCGTCCTCGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGGTCGGTCAGCTTCTGCTaGGCGAAGTCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VLQPGRPRQPRREGRRQGSVSFC*AKSKSL
Trigger: CAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGA...CCCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGGACGACCTGGCTGGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp TGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCCCACGCTGACCGGCACCGTACTTGGGCACTaGCTCCAGGCCGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: CPSAPNPSPSEGVPTLTGTVLGH*LQADPG
Trigger: CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGT...GCCGGTCAGCGTGGGAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593795.5
ENST00000597280.5
CDS-3UTR TCA 90 bp GTGCTCCAGCCAGGTCGTCCTCGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGGCTTTTGGCTCCTGGATaGGACACACTCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VLQPGRPRQPRREGRRQGLLAPG*DTLSWE
Trigger: CTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAG...CCCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGGACGACCTGGCTGGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp CTGCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCAGAGATGTCCACTCCTaGTGGCTTGGGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: LPAAYTLTGSLMPFPREPRDVHS*WLGGWA
Trigger: GGCCCATCCCCCAAGCCAGCAGGAGTGGACATCTCT...GGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGTGCTGCCCTCAGACTTaGCCGCCCCTCCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: APRVAREHFQMPVVLSGVCCPQT*PPLQER
Trigger: CCGCTCCTGGAGGGGCGGGCAAGTCTGAGGGCAGCA...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337018.10
ENST00000452918.7
CDS-3UTR GCA 90 bp GCCCTCACTGCACAGTCTGCTGAGGTCGGCTTCTGGTCGGCTCCTCGCAAGTTCCCACCCCAGGCTGCCTaGTGCGTACACGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: ALTAQSAEVGFWSAPRKFPPQAA*CVHADR
Trigger: CCGGTCAGCGTGTACGCAGCAGGCAGCCTGGGGTGG...GAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGCAGACTGTGCAGTGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCGGGTCTGGGTCCCGGTaGTCGCTCTCCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTGSGSR*SLSSPS
Trigger: GGAAGGCGAGGAGAGCGACCACCGGGACCCAGACCC...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCAGGAGTGCTGGGGAATCTaGAGAGCGGGGGCGATCACA +
Preference number: 4 (lower is better)
Translates to: ACCVHADRLPDALSEGAQECWGI*RAGAIT
Trigger: TGTGATCGCCCCCGCTCTCCAGATTCCCCAGCACTC...CTGGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp GATGCTGGAGAGAGTGCGCTTGATCCACGCTGCAGGTGTGTGCGCCTCGCTCGGCCTCGCTCGGGTCAATaGGCTGAGCCCCGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: DAGESALDPRCRCVRLARPRSGQ*AEPRLE
Trigger: CTCCAAGCGGGGCTCAGCCCATTGACCCGAGCGAGG...CCGAGCGAGGCGCACACACCTGCAGCGTGGATCAAGCGCACTCTCTCCAGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp GTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTGTTCGGGACCCTGGCTaGCCCGGCTATGGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: VFFVLLPVSTQPFPFRGGVRDPG*PGYGFP
Trigger: CGGGAACCCATAGCCGGGCCAGCCAGGGTCCCGAAC...ACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
3UTR CAA 72 bp AGGAGCCCCCGCCGCTGCCACGGAAGGAGTTTCTTCTaGAGGTTGCGGACAGCCCGGGAGTACAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: RSPRRCHGRSFF*RLRTAREYSMA
Trigger: GGCCATGCTGTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR TCA 90 bp GGTGCTCCAGCCAGGTCGTCCTCGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGGCAAATTTCCAGTCCTaGGAACGGAAATGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: GAPARSSSAASPGRPSAGANFQS*ERKCPN
Trigger: ATTGGGGCATTTCCGTTCTCAGGACTGGAAATTTGC...CCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGGACGACCTGGCTGGAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp AGACAGGCGTGGCCTATTTCCACACGCACATCCACGGAGGCTGGCCTGGAGGCCGTGCCCACTACCCTGTaGTCTGCTCGCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: RQAWPISTRTSTEAGLEAVPTTL*SARWGT
Trigger: TGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCAC...GGCCTCCAGGCCAGCCTCCGTGGATGTGCGTGTGGAAATAGGCCACGCCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGCAGCCCCGGAGCCCTTaGGCACGGAGGAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSQPRSP*ARRSPR
Trigger: GCGGGGGCTCCTCCGTGCTCAAGGGCTCCGGGGCTG...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp GCTCTCCTGAGAACCCGTGGTGTCACCACCACCAGTGTGAAGGTTGTGCGGAGACGTCGGCAGGGGTGCTaGCCTCAGACTTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: ALLRTRGVTTTSVKVVRRRRQGC*PQTCPP
Trigger: GGGCGGGCAAGTCTGAGGGCAGCACCCCTGCCGACG...TCTCCGCACAACCTTCACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp ATCCTCTTCCGAGGGAAGCAGGTACCTGAGGAGGCCTGTGACAAGGCAGGTGCTGGCCGTCGGCAGGGGTaGTGCCCTCAGACTTGCCCG +
Preference number: 4 (lower is better)
Translates to: ILFRGKQVPEEACDKAGAGRRQG*CPQTCP
Trigger: CGGGCAAGTCTGAGGGCAGCACCCCTGCCGACGGCC...AGCACCTGCCTTGTCACAGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTCCACCCCAGGCTGCCTaGTGCGTACACGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPPPQAA*CVHADR
Trigger: CCGGTCAGCGTGTACGCAGCAGGCAGCCTGGGGTGG...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR GCA 90 bp AGTCGCCCTTCCACTTGCATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTAGTGGGGAGTGGGGGTaGCGCAGGGTCGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SRPSTCMMARPSGLGTVRSGEWG*RRVGLA
Trigger: CGCCAGCCCGACCCTGCGGCACCCCCACTCCCCACT...ACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS-3UTR CCA 90 bp GGTGCTCCAGCCAGGTCGTCCTCGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGCATACATCTCTGCTCTaGATCTTGGGACTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: GAPARSSSAASPGRPSAGHTSLL*ILGLPL
Trigger: TAAGGGCAGTCCCAAGATCCAGAGCAGAGATGTATG...CCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGGACGACCTGGCTGGAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGGGAGCCTGCCGGCCGTaGTGTTTCAGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: APRVAREHFQMPVVLSGVGACRP*CFSLVP
Trigger: AGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCC...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCCCATCCGTCAGGCCCTTCTaGGAGCTGTGCACGACCTGG +
Preference number: 4 (lower is better)
Translates to: LCAPARQHPTLPLPRGFPSVRPF*ELCTTW
Trigger: CCAGGTCGTGCACAGCTCCCAGAAGGGCCTGACGGA...TGGGAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593795.5
3UTR CAA 72 bp CATGGAATGGTCAGGGCGATGCTGGAGAGAGTGCGCTaGATCCACGCTGCAGGTGTGTGCGCCTCGCTCGGG +
Preference number: 4 (lower is better)
Translates to: HGMVRAMLERVR*IHAAGVCASLG
Trigger: CCCGAGCGAGGCGCACACACCTGCAGCGTGGATCAAGCGCACTCTCTCCAGCATCGCCCTGACCATTCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CAA 72 bp CCCCGCCGCTGCCACGGAAGGAGTTTCTTCTTGAGGTaGCGGACAGCCCGGGAGTACAGCATGGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: PRRCHGRSFFLR*RTAREYSMALT
Trigger: AGTGAGGGCCATGCTGTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCCGTGGCAGCGGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR TCA 90 bp GTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGGGGACATCCGCTGCTaGCTAGCCAGGCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VSSLCSCPSAPNPSPSEGGDIRC*LARPSG
Trigger: ACCTGAAGGCCTGGCTAGTCAGCAGCGGATGTCCCC...CCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACAC
63% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGACAGCCCCGGAGCCCTTaGGCACGGAGGAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSRQPRSP*ARRSPR
Trigger: GCGGGGGCTCCTCCGTGCTCAAGGGCTCCGGGGCTG...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp TTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGCAGCCCCGGAGCCCTTaGGCACGGAGGAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: FGHGTTPRPVIGNSNWFMQPRSP*ARRSPR
Trigger: GCGGGGGCTCCTCCGTGCTCAAGGGCTCCGGGGCTG...CATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp CTGCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCCAAGCTGGTCGATGGTaGCCACTACCCTGTGATCTG +
Preference number: 4 (lower is better)
Translates to: LPAAYTLTGSLMPFPREPQAGRW*PLPCDL
Trigger: CAGATCACAGGGTAGTGGGCACCATCGACCAGCTTG...GGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGAGGAGCCCCCGCCGCTaGCACGGAAGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: APRVAREHFQMPVVLSGVRSPRR*HGRSFF
Trigger: GAAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCCT...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGCGTCGGCAGGGGTGCTaGCCTCAGACTTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRRRQGC*PQTCPP
Trigger: GGGCGGGCAAGTCTGAGGGCAGCACCCCTGCCGACG...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337018.10
ENST00000452918.7
CDS-3UTR GCA 90 bp TTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCCGTCGGCAGGGGTGCTaGCCTCAGACTTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: FHVHTKPYLGTGSRPIQGRRQGC*PQTCPP
Trigger: GGGCGGGCAAGTCTGAGGGCAGCACCCCTGCCGACG...GCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GCTCTCCTGAGAACCCGTGGTGTCACCACCACCAGTGTGAAGGTTGTGCGGAGACCCCAGGCTGCCTGCTaGGTACACGCTGACCGGCTC +
Preference number: 4 (lower is better)
Translates to: ALLRTRGVTTTSVKVVRRPQAAC*VHADRL
Trigger: GAGCCGGTCAGCGTGTACGCAGCAGGCAGCCTGGGG...TCTCCGCACAACCTTCACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCGAGGATAGGAGGGTCTaGGTCCCGGTGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: LLCAPARQHPTLPLPRGFEDRRV*VPVVAL
Trigger: GAGAGCGACCACCGGGACCCAGACCCTCCTATCCTC...GAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCAGGTCCAACTGGGTCTaGCGGGCAGTCCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLCAPARQHPTLPLPRGFRSNWV*RAVLGS
Trigger: GCTGCCAAGGACTGCCCGCCAGACCCAGTTGGACCT...GAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp GTGCTCCAGCCAGGTCGTCCTCGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGGGAATTGTTCGATCTCTaGTCCCACCTGAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: VLQPGRPRQPRREGRRQGELFDL*SHLSNK
Trigger: TTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTC...CCCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGGACGACCTGGCTGGAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCAGCAAGCAGAGCCCCTaGGGGTGGTGGCACTGCAAG +
Preference number: 4 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTSKQSP*GWWHCK
Trigger: CTTGCAGTGCCACCACCCCCAGGGGCTCTGCTTGCT...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGCTCCTCTATCCCGGCTaGCCGGCAGCTGGCAGCACG +
Preference number: 4 (lower is better)
Translates to: PLPRTHRTISAQTWRSGRLLYPG*PAAGST
Trigger: CGTGCTGCCAGCTGCCGGCCAGCCGGGATAGAGGAG...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp CTGGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACCTGAGCCCAGGGCCTaGCATGCCAGGAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: LAGPAMGSREWESSSRRKPEPRA*HARNWA
Trigger: TGCCCAGTTCCTGGCATGCCAGGCCCTGGGCTCAGG...TTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCCTGGAATTGGGCACTaGCTCCAGGCCGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTPGIGH*LQADPG
Trigger: CCCTGGATCGGCCTGGAGCCAGTGCCCAATTCCAGG...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR TCA 90 bp CTGGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAAGGGGACATCCGCTGCTaGCTAGCCAGGCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LAGPAMGSREWESSSRRKGDIRC*LARPSG
Trigger: ACCTGAAGGCCTGGCTAGTCAGCAGCGGATGTCCCC...TTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp CTGGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAAGTGCCCACTACCCTGTaGTCTGCTCGCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LAGPAMGSREWESSSRRKVPTTL*SARWGT
Trigger: TGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCAC...TTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp CGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACACAGCCCCGGAGCCCTTaGGCACGGAGGAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: RSASAGRSPSPWVSSFWTQPRSP*ARRSPR
Trigger: GCGGGGGCTCCTCCGTGCTCAAGGGCTCCGGGGCTG...TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp CATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACAGGAGTTGTCCTCTCGGGGGTaGCCCTGGAACATGCTCTGC +
Preference number: 4 (lower is better)
Translates to: HALLAPDTFTAPALNPQELSSRG*PWNMLC
Trigger: GCAGAGCATGTTCCAGGGTCACCCCCGAGAGGACAA...CTCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR TCA 90 bp CTGCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCCAAATGTGGCCAAAATaGCCAGGGCCAACAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPAAYTLTGSLMPFPREPQMWPK*PGPTSW
Trigger: CCAGCTTGTTGGCCCTGGTCATTTTGGCCACATTTG...GGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp AAGCTGGTCGATGGTGCCCACTACCCTGTGATCTGCTCGCTGGGGGACAGCATCAGGAGCCCCCGCCGCTaGCACGGAAGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: KLVDGAHYPVICSLGDSIRSPRR*HGRSFF
Trigger: GAAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCCT...GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCACCATCGACCAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR GCA 90 bp ACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGACTCACAGGCTGAGGTaGCTTTCGGGGGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: TPNRTWALAPGRSRAGMMTHRLR*LSGAAP
Trigger: TGGCGCTGCCCCCGAAAGGCACCTCAGCCTGTGAGT...CATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CTGCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCCTCTCGCATCGGCTCTaGTTCGGCTTTCTTAACCTG +
Preference number: 4 (lower is better)
Translates to: LPAAYTLTGSLMPFPREPLSHRL*FGFLNL
Trigger: CAGGTTAAGAAAGCCGAACCAGAGCCGATGCGAGAG...GGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCCCGGGAGTACAGCATaGCCCTCACTGCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTPGSTA*PSLHSL
Trigger: CAGACTGTGCAGTGAGGGCCATGCTGTACTCCCGGG...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTTCCGGGTCTGGGTCCCGGTaGTCGCTCTCCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LINFGPVFGTLAGPAMGSGSGSR*SLSSPS
Trigger: GGAAGGCGAGGAGAGCGACCACCGGGACCCAGACCC...GGAACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAGAGGATAGGAGGGTCTaGGTCCCGGTGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SGERALPDACCPLGGDPGEDRRV*VPVVAL
Trigger: GAGAGCGACCACCGGGACCCAGACCCTCCTATCCTC...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGGGAGCCTGCCGGCCGTaGTGTTTCAGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PLPRTHRTISAQTWRSGRGACRP*CFSLVP
Trigger: AGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCC...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGAGGTCCAACTGGGTCTaGCGGGCAGTCCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLRSNWV*RAVLGS
Trigger: GCTGCCAAGGACTGCCCGCCAGACCCAGTTGGACCT...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGACCACTCCTGCTGGCTTaGGGGATGGGCCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SGERALPDACCPLGGDPGPLLLA*GMGLRL
Trigger: AAGCCTCAGGCCCATCCCCCAAGCCAGCAGGAGTGG...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp ACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGCCACTCCTGCTGGCTTaGGGGATGGGCCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TPNRTWALAPGRSRAGMMPLLLA*GMGLRL
Trigger: AAGCCTCAGGCCCATCCCCCAAGCCAGCAGGAGTGG...CATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTCTGTGTTCGGGACCCTaGCTGGCCCGGCTATGGGTT +
Preference number: 4 (lower is better)
Translates to: GWPGYGFPGMGKQFQTETLCSGP*LARLWV
Trigger: AACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAG...AGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp AGCCCACCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCACTAGAGGCGGCTCCCTaGGTGACAACCGCGCGCCCC +
Preference number: 4 (lower is better)
Translates to: SPPQEEPASPYKGCNKTALEAAP*VTTARP
Trigger: GGGGCGCGCGGTTGTCACCCAGGGAGCCGCCTCTAG...TGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGGTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS-3UTR TCA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGCCTCTGGCCTGGACTTaGCTGCCGCCCCTAAGCACA +
Preference number: 4 (lower is better)
Translates to: PLPRTHRTISAQTWRSGRPLAWT*LPPLST
Trigger: TGTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGG...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp ACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTGCTGTGAGCAGGCCCTaGGTCTCCCCCTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: TKPYLGTGSRPIQGRDDVAVSRP*VSPFPR
Trigger: CCTAGGAAAGGGGGAGACTCAGGGCCTGCTCACAGC...AACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GTGCTCCAGCCAGGTCGTCCTCGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGGGGAATCCTGCCCATTTaGTTATTTCTATCCCAAATC +
Preference number: 4 (lower is better)
Translates to: VLQPGRPRQPRREGRRQGGILPI*LFLSQI
Trigger: GATTTGGGATAGAAATAATCAAATGGGCAGGATTCC...CCCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGGACGACCTGGCTGGAGCAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp GGAACAGTCCGTTTGCTGGTCATGTTATGTGGTAGGTGGCTGTCATCTGTGAGACAGCCCCGGAGCCCTTaGGCACGGAGGAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: GTVRLLVMLCGRWLSSVRQPRSP*ARRSPR
Trigger: GCGGGGGCTCCTCCGTGCTCAAGGGCTCCGGGGCTG...TCTCACAGATGACAGCCACCTACCACATAACATGACCAGCAAACGGACTGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGTGCTCCAGCCAGGTCGTCCTCGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGAAGCTCAGTATTAAATaGAATGCCTGCTGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: GAPARSSSAASPGRPSAGKLSIK*NACWRL
Trigger: TAACCTCCAGCAGGCATTTCATTTAATACTGAGCTT...CCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGGACGACCTGGCTGGAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp TCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGAGGAGCCCCCGCCGCTaGCACGGAAGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SCTHQTVLGHWLQADPGQRSPRR*HGRSFF
Trigger: GAAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCCT...CTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGAGAGGCCTGGAGCCTaGCGGCCGTGGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRERPGA*RPWCFS
Trigger: GCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCTC...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp GCCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACGTCGGCAGGGGTGCTaGCCTCAGACTTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: ASETSAPETAETFVFMYTRRQGC*PQTCPP
Trigger: GGGCGGGCAAGTCTGAGGGCAGCACCCCTGCCGACG...TGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCGGCCGTCGGCAGGGGTaGTGCCCTCAGACTTGCCCG +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESGRRQG*CPQTCP
Trigger: CGGGCAAGTCTGAGGGCAGCACCCCTGCCGACGGCC...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337018.10
ENST00000452918.7
CDS-3UTR GCA 90 bp GCCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACAGGCCGTCGGCAGGGGTaGTGCCCTCAGACTTGCCCG +
Preference number: 4 (lower is better)
Translates to: ASETSAPETAETFVFMYTGRRQG*CPQTCP
Trigger: CGGGCAAGTCTGAGGGCAGCACCCCTGCCGACGGCC...TGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTGAGAGCACTTCCAGATaGCTGTTGTCCTCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: VFFVLLPVSTQPFPFRGGESTSR*LLSSRG
Trigger: CCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTC...ACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGTCCCGACACCTTCACTaGCCCAGCGCTGAATCCACA +
Preference number: 4 (lower is better)
Translates to: APRVAREHFQMPVVLSGVSRHLH*PSAEST
Trigger: TGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGA...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR GCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTAGCTGGGATTACAGGTaGCCGCTACCACGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPSWDYR*PLPRLA
Trigger: AGCCAGGCGTGGTAGCGGGCACCTGTAATCCCAGCT...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAAGCACGCACCATGCTCTaGTGGCTCCCGACACCTTCA +
Preference number: 4 (lower is better)
Translates to: VAREHFQMPVVLSGVTLEARTML*WLPTPS
Trigger: TGAAGGTGTCGGGAGCCAGCAGAGCATGGTGCGTGC...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGTGGCAGCACGCACCATaGTCTGCTGGCTCCCGACAC +
Preference number: 4 (lower is better)
Translates to: PLPRTHRTISAQTWRSGRWQHAP*SAGSRH
Trigger: GTGTCGGGAGCCAGCAGAGCATGGTGCGTGCTGCCA...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp CCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCCCCAGGCTGCCTGCTaGGTACACGCTGACCGGCTC +
Preference number: 4 (lower is better)
Translates to: PLSEHIECVFFVLLPVSTPQAAC*VHADRL
Trigger: GAGCCGGTCAGCGTGTACGCAGCAGGCAGCCTGGGG...GGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR GCA 90 bp GTCGATGGTGCCCACTACCCTGTGATCTGCTCGCTGGGGGACAGCATCACTCAGTGGCTTTTGAGGGGGTaGCCAGAGGGCCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: VDGAHYPVICSLGDSITQWLLRG*PEGPGY
Trigger: GTAACCAGGGCCCTCTGGGCACCCCCTCAAAAGCCA...CTGAGTGATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCACCATCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR GCA 90 bp CCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGGTGAGACGCTGCGGCTaGCGAGGCCTGTCCCGCGCG +
Preference number: 4 (lower is better)
Translates to: PYVRKVQSLRGFTTPIPLVRRCG*RGLSRA
Trigger: CGCGCGGGACAGGCCTCGGCAGCCGCAGCGTCTCAC...CAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS-3UTR CCA 90 bp GTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGTTAGAGCTCGACCTCTaGCCTGGACTTGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: VSSLCSCPSAPNPSPSEGLELDL*PGLDCR
Trigger: GCGGCAGTCAAGTCCAGGCCAGAGGTCGAGCTCTAA...CCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CCTGGAGCCTGCCGGCCGTGGTGTTTCAGCCTGGTGCCTGAGGATAGGAGGGTCTCACAAGCTGGTCGATaGTGCCCACTACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: PGACRPWCFSLVPEDRRVSQAGR*CPLPCD
Trigger: ATCACAGGGTAGTGGGCACCATCGACCAGCTTGTGA...GACCCTCCTATCCTCAGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp ACCCTGGAACATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATGCTGAGGTCGGCTTCTaGTCGGCTCCTCGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: TLEHALLAPDTFTAPALNAEVGF*SAPRKF
Trigger: GAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGC...ATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGTTCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR CCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGCTGAGGTCGGCTTCTaGTCGGCTCCTCGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPAEVGF*SAPRKF
Trigger: GAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGC...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGCCCGGGAGTACAGCATaGCCCTCACTGCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLPGSTA*PSLHSL
Trigger: CAGACTGTGCAGTGAGGGCCATGCTGTACTCCCGGG...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TTGACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGGGGTCTGGGTCCCGGTaGTCGCTCTCCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LTPAKDSQNHLSSNLEERGSGSR*SLSSPS
Trigger: GGAAGGCGAGGAGAGCGACCACCGGGACCCAGACCC...CCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGGGGTCTGGGTCCCGGTaGTCGCTCTCCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: WRIEWSYTQQSAGESGERGSGSR*SLSSPS
Trigger: GGAAGGCGAGGAGAGCGACCACCGGGACCCAGACCC...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGGAGGATAGGAGGGTCTaGGTCCCGGTGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: PLPRTHRTISAQTWRSGREDRRV*VPVVAL
Trigger: GAGAGCGACCACCGGGACCCAGACCCTCCTATCCTC...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp TGCCTTTCGGGGGCAGCGCCACCTTCTGAAGGGGAACCAAGACAGATTTGGAGGAGGTCCAACTGGGTCTaGCGGGCAGTCCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CLSGAAPPSEGEPRQIWRRSNWV*RAVLGS
Trigger: GCTGCCAAGGACTGCCCGCCAGACCCAGTTGGACCT...CCTCCAAATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCCCCCGAAAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGCCACTCCTGCTGGCTTaGGGGATGGGCCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: PLPRTHRTISAQTWRSGRPLLLA*GMGLRL
Trigger: AAGCCTCAGGCCCATCCCCCAAGCCAGCAGGAGTGG...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp ATCCTCTTCCGAGGGAAGCAGGTACCTGAGGAGGCCTGTGACAAGGCAGGTGCTCCACTCCTGCTGGCTTaGGGGATGGGCCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: ILFRGKQVPEEACDKAGAPLLLA*GMGLRL
Trigger: AAGCCTCAGGCCCATCCCCCAAGCCAGCAGGAGTGG...AGCACCTGCCTTGTCACAGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTCTCAGGCATCACCTCTaGGCTCTCCAGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPLRHHL*ALQLSL
Trigger: GAGGCTGAGCTGGAGAGCCCAGAGGTGATGCCTGAG...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337018.10
ENST00000452918.7
CDS-3UTR CCA 90 bp ACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGCTCAGGCATCACCTCTaGGCTCTCCAGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TPNRTWALAPGRSRAGMMLRHHL*ALQLSL
Trigger: GAGGCTGAGCTGGAGAGCCCAGAGGTGATGCCTGAG...CATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGGACCCATGGCCAACATaGAAGCTGTCGGAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: APRVAREHFQMPVVLSGVDPWPT*KLSEGS
Trigger: TGACCCCTCCGACAGCTTCCATGTTGGCCATGGGTC...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp AGCATCTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGGTTCGGGACCCTGGCTaGCCCGGCTATGGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: SIWKPRFLSVSFCWAKSKVRDPG*PGYGFP
Trigger: CGGGAACCCATAGCCGGGCCAGCCAGGGTCCCGAAC...CTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAGATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACACACTGCACATCCACGGAGGCTaGCCTGGAGGCCTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GNFSAYQHASEGRRPYTLHIHGG*PGGLEG
Trigger: CCCCTCAAGGCCTCCAGGCCAGCCTCCGTGGATGTG...CAGTGTGTAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGAACATCAACTTTGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGCTGTCCCGCGCGGAGTaGGGAGTGGGGGTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GTSTLLGEISLHTSTPARLSRAE*GVGVPQ
Trigger: CTGCGGCACCCCCACTCCCCACTCCGCGCGGGACAG...CCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACAAAGTTGATGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000601879.5
3UTR CAA 72 bp CCTTGGCAGCATCATTTCTGTCTGGCAGGGATGGTTTaGCCTGTGAGAGGCCTGGAGCCTGCCGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: PWQHHFCLAGMV*PVRGLEPAGRG
Trigger: ACCACGGCCGGCAGGCTCCAGGCCTCTCACAGGCAAAACCATCCCTGCCAGACAGAAATGATGCTGCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR TCA 90 bp CATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACAGGAGCCGGCATCTCTAGAGTaGGCTACAGATCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: HALLAPDTFTAPALNPQEPASLE*ATDPLR
Trigger: CCTCAGTGGATCTGTAGCTCACTCTAGAGATGCCGG...CTCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp CCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGGCTGTGAGCAGGCCCTaGGTCTCCCCCTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: PAKDSQNHLSSNLEERQEAVSRP*VSPFPR
Trigger: CCTAGGAAAGGGGGAGACTCAGGGCCTGCTCACAGC...CTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp CCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGCTGTGAGCAGGCCCTaGGTCTCCCCCTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: PCQGLTEPSQLKLGGAAGAVSRP*VSPFPR
Trigger: CCTAGGAAAGGGGGAGACTCAGGGCCTGCTCACAGC...TCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp GGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACACACTGGCTGTGAGCAGGCCCTaGGTCTCCCCCTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: GNFSAYQHASEGRRPYTLAVSRP*VSPFPR
Trigger: CCTAGGAAAGGGGGAGACTCAGGGCCTGCTCACAGC...CAGTGTGTAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGGTGCCCACTACCCTGTaGTCTGCTCGCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: PAKDSQNHLSSNLEERQEVPTTL*SARWGT
Trigger: TGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCAC...CTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAGAAGGAGTTTCTTCTTaGGGTTGCGGACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: SGERALPDACCPLGGDPGEGVSS*GCGQPG
Trigger: CCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTC...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTCAGCCCCGGAGCCCTTaGGCACGGAGGAGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: ESFRALVPECRLGNYREFQPRSP*ARRSPR
Trigger: GCGGGGGCTCCTCCGTGCTCAAGGGCTCCGGGGCTG...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAATCTAAGCTGGGGTCCTaGGGAGAAGGTCCAACTGGG +
Preference number: 4 (lower is better)
Translates to: VAREHFQMPVVLSGVTLESKLGS*GEGPTG
Trigger: CCCAGTTGGACCTTCTCCTCAGGACCCCAGCTTAGA...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AAGCTGGTCGATGGTGCCCACTACCCTGTGATCTGCTCGCTGGGGGACAGCATCTCTAAGCTGGGGTCCTaGGGAGAAGGTCCAACTGGG +
Preference number: 4 (lower is better)
Translates to: KLVDGAHYPVICSLGDSISKLGS*GEGPTG
Trigger: CCCAGTTGGACCTTCTCCTCAGGACCCCAGCTTAGA...GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCACCATCGACCAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR TCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGTCACCACCACCAGTGTaGAGGTTGTGCGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: APRVAREHFQMPVVLSGVSPPPV*RLCGDD
Trigger: GTCATCTCCGCACAACCTTCACACTGGTGGTGGTGA...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCACTGCTTCCCCTTCCATaGGGTCCACGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: DPCQGLTEPSQLKLGGAALLPLP*GPRGSP
Trigger: AGGAGAGCCCCGTGGACCTCATGGAAGGGGAAGCAG...TGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp ACATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACAGGAAGGAGATGTGCCCTTTaGCCCCTGCCAAGGACTCAC +
Preference number: 4 (lower is better)
Translates to: TCSAGSRHLHCPSAESTGRRCAL*PLPRTH
Trigger: GTGAGTCCTTGGCAGGGGTCAAAGGGCACATCTCCT...TCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR TCA 90 bp ACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGGGCAGCGCCACCTTCTaGAGGGGAACCAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: TPNRTWALAPGRSRAGMMGSATF*RGTKTD
Trigger: ATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCC...CATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATAGGCGGCTCCCTGGGTaGCAACCGCGCGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: QRASELWYPSADLVITGNRRLPG*QPRAPP
Trigger: AGGTGGGGCGCGCGGTTGTCACCCAGGGAGCCGCCT...ATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS-3UTR GCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTCACTACCCTGTGATCTaGTCGCTGGGGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPHYPVI*SLGDSI
Trigger: GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTG...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGAGAGGCCTGGAGCCTaGCGGCCGTGGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSERPGA*RPWCFS
Trigger: GCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCTC...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp TGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACTGCTGCCCTCAGACTTaGCCGCCCCTCCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: CRNTSNVSSLCSCPSAPNCCPQT*PPLQER
Trigger: CCGCTCCTGGAGGGGCGGGCAAGTCTGAGGGCAGCA...GTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR GCA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTCGTCGGCAGGGGTGCTaGCCTCAGACTTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: SDGNKPETVKHPEWRESTRRQGC*PQTCPP
Trigger: GGGCGGGCAAGTCTGAGGGCAGCACCCCTGCCGACG...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337018.10
ENST00000452918.7
CDS-3UTR GCA 90 bp TTTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGGCCGTCGGCAGGGGTaGTGCCCTCAGACTTGCCCG +
Preference number: 4 (lower is better)
Translates to: FWTWDDPEACHRQFELVHGRRQG*CPQTCP
Trigger: CGGGCAAGTCTGAGGGCAGCACCCCTGCCGACGGCC...ATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGAGAGCACTTCCAGATaGCTGTTGTCCTCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPESTSR*LLSSRG
Trigger: CCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTC...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp CATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGGACTGGACTCACAGGCTGAGGTaGCTTTCGGGGGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: HGTTPRPVIGNSNWFMDWTHRLR*LSGAAP
Trigger: TGGCGCTGCCCCCGAAAGGCACCTCAGCCTGTGAGT...CCAGTCCATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR GCA 90 bp GCTCTCCTGAGAACCCGTGGTGTCACCACCACCAGTGTGAAGGTTGTGCGGAGAAGCTGGGATTACAGGTaGCCGCTACCACGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ALLRTRGVTTTSVKVVRRSWDYR*PLPRLA
Trigger: AGCCAGGCGTGGTAGCGGGCACCTGTAATCCCAGCT...TCTCCGCACAACCTTCACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR GCA 90 bp CAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGGTGGGCACGCTGCAGGTGTGTaGGCCTCGCTCGGGTCAATG +
Preference number: 4 (lower is better)
Translates to: QGLTEPSQLKLGGAAGGGHAAGV*ASLGSM
Trigger: CATTGACCCGAGCGAGGCGCACACACCTGCAGCGTG...CCCACCTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCGCTTGATCCACGCTaGAGGTGTGTGCGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIAALDPR*RCVRLA
Trigger: AGCGAGGCGCACACACCTGCAGCGTGGATCAAGCGC...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAATGCCCCAATTTCCGGTaGCCAATGACCTGGTCCCGA +
Preference number: 4 (lower is better)
Translates to: VAREHFQMPVVLSGVTLECPNFR*PMTWSR
Trigger: TCGGGACCAGGTCATTGGCCACCGGAAATTGGGGCA...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGTTAGAGCTCGACCTCTaGCCTGGACTTGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLLELDL*PGLDCR
Trigger: GCGGCAGTCAAGTCCAGGCCAGAGGTCGAGCTCTAA...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GGGGTGACCCTGGAATTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATTCCGGCAGAGAGAGTTaGTGGTTTCTAGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: GVTLELGTGSRPIQGRDDSGRES*WFLGQE
Trigger: CTCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGA...ATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAATTCCAGGGTCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR CCA 90 bp GTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCGGCTTTCTTAACCTaGAGGGGACATCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VFFVLLPVSTQPFPFRGGSAFLT*RGHPLL
Trigger: CAGCAGCGGATGTCCCCTCCAGGTTAAGAAAGCCGA...ACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp AGTCGCCCTTCCACTTGCATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTGAGGATAGGAGGGTCTaGGTCCCGGTGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SRPSTCMMARPSGLGTVREDRRV*VPVVAL
Trigger: GAGAGCGACCACCGGGACCCAGACCCTCCTATCCTC...ACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCCAGTCCAACTGGAAAATCAGCCAGAGGAGCTGGTTCCTCAGCACTCACAGGCGAGGATAGGAGGGTCTaGGTCCCGGTGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: ASPTGKSARGAGSSALTGEDRRV*VPVVAL
Trigger: GAGAGCGACCACCGGGACCCAGACCCTCCTATCCTC...GCCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGATTTTCCAGTTGGACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTCGTGGTGTTTCAGCCTaGTGCCTGAGGATAGGAGGG +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPRGVSA*CLRIGG
Trigger: CCCTCCTATCCTCAGGCACCAGGCTGAAACACCACG...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAACGTGGTGTTTCAGCCTaGTGCCTGAGGATAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VAREHFQMPVVLSGVTLERGVSA*CLRIGG
Trigger: CCCTCCTATCCTCAGGCACCAGGCTGAAACACCACG...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTCGTGGTGTTTCAGCCTaGTGCCTGAGGATAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GWPGYGFPGMGKQFQTETRGVSA*CLRIGG
Trigger: CCCTCCTATCCTCAGGCACCAGGCTGAAACACCACG...AGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGAGCCTGCCGGCCGTaGTGTTTCAGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSGACRP*CFSLVP
Trigger: AGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCC...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AGCATCTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGGGAGCCTGCCGGCCGTaGTGTTTCAGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SIWKPRFLSVSFCWAKSKGACRP*CFSLVP
Trigger: AGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCC...CTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAGATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGGGAGCCTGCCGGCCGTaGTGTTTCAGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: WRIEWSYTQQSAGESGERGACRP*CFSLVP
Trigger: AGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCC...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp CTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCTCTCCTGAGAACCCGTaGTGTCACCACCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: LLCAPARQHPTLPLPRGFSPENP*CHHHQC
Trigger: ACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGA...GAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTTCGCCCAGGCTGGAGTaGAGTGGCATGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPSPRLE*SGMISA
Trigger: AGCTGAGATCATGCCACTCCACTCCAGCCTGGGCGA...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp AAGCTGGTCGATGGTGCCCACTACCCTGTGATCTGCTCGCTGGGGGACAGCATCGTGCCCAGAGGGCCCTaGTTACCTCGGAATGCCTTA +
Preference number: 4 (lower is better)
Translates to: KLVDGAHYPVICSLGDSIVPRGP*LPRNAL
Trigger: TAAGGCATTCCGAGGTAACCAGGGCCCTCTGGGCAC...GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCACCATCGACCAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp AAGCTGGTCGATGGTGCCCACTACCCTGTGATCTGCTCGCTGGGGGACAGCATCTCACCCTCGAAGAGCTaGCTTTTGAGGGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KLVDGAHYPVICSLGDSISPSKS*LLRGCP
Trigger: TGGGCACCCCCTCAAAAGCCAGCTCTTCGAGGGTGA...GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCACCATCGACCAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp ATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCCTGAGCCCAGGGCCTaGCATGCCAGGAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: IECVFFVLLPVSTQPFPFPEPRA*HARNWA
Trigger: TGCCCAGTTCCTGGCATGCCAGGCCCTGGGCTCAGG...GAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp CTGGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAAGAGCTACAGATCCACTaGGGGAGTATCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: LAGPAMGSREWESSSRRKELQIH*GSICHR
Trigger: GCGATGGCAGATACTCCCTCAGTGGATCTGTAGCTC...TTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGCCGGCATCTCTAGAGTaGGCTACAGATCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLPASLE*ATDPLR
Trigger: CCTCAGTGGATCTGTAGCTCACTCTAGAGATGCCGG...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAATTTCCGGTGGCCAATaGCCTGGTCCCGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: SGERALPDACCPLGGDPGISGGQ*PGPENQ
Trigger: CTGATTCTCGGGACCAGGTCATTGGCCACCGGAAAT...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGATTTCCGGTGGCCAATaGCCTGGTCCCGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLISGGQ*PGPENQ
Trigger: CTGATTCTCGGGACCAGGTCATTGGCCACCGGAAAT...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGCCTCTGGCCTGGACTTaGCTGCCGCCCCTAAGCACA +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSPLAWT*LPPLST
Trigger: TGTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGG...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGCCTCTGGCCTGGACTTaGCTGCCGCCCCTAAGCACA +
Preference number: 4 (lower is better)
Translates to: WRIEWSYTQQSAGESGERPLAWT*LPPLST
Trigger: TGTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGG...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR TCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGACATCCGCTGCTaGCTAGCCAGGCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSGDIRC*LARPSG
Trigger: ACCTGAAGGCCTGGCTAGTCAGCAGCGGATGTCCCC...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCGTGCCCACTACCCTGTaGTCTGCTCGCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSVPTTL*SARWGT
Trigger: TGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCAC...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp CATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACAGGAGACAGGCTGCCTTCGATaGCACGTTTCACAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HALLAPDTFTAPALNPQETGCLR*HVSQAG
Trigger: ACCAGCTTGTGAAACGTGTCATCGAAGGCAGCCTGT...CTCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp CTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCACAGGCTGCCTTCGATaGCACGTTTCACAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLCAPARQHPTLPLPRGFTGCLR*HVSQAG
Trigger: ACCAGCTTGTGAAACGTGTCATCGAAGGCAGCCTGT...GAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp GGCAGGCCATGCGCATCTGCCCTTGGCCAGTGTGAGGTTTGCTCCTTCAGCAAAGAAGGAGTTTCTTCTTaGGGTTGCGGACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GRPCASALGQCEVCSFSKEGVSS*GCGQPG
Trigger: CCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTC...TTTGCTGAAGGAGCAAACCTCACACTGGCCAAGGGCAGATGCGCATGGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGCAGGGAGAAGAGGTCTaGGGTGCTTCAGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLQGEEV*GASEMS
Trigger: GGACATCTCTGAAGCACCTCAGACCTCTTCTCCCTG...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGCTTTTGGCTCCTGGATaGGACACACTCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VSSLCSCPSAPNPSPSEGLLAPG*DTLSWE
Trigger: CTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAG...CCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR TCA 90 bp ACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTGGCAGCGCCACCTTCTaGAGGGGAACCAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: TKPYLGTGSRPIQGRDDVGSATF*RGTKTD
Trigger: ATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCC...AACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp TTGACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGTCAGCACTCACAGGCTaGGGTGCCTTTCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LTPAKDSQNHLSSNLEERSALTG*GAFRGQ
Trigger: CTGCCCCCGAAAGGCACCTCAGCCTGTGAGTGCTGA...CCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR TCA 90 bp TGGCAGTGGCTGTCACAGTCGCCCTTCCACTTGCATGATGGCAAGGCCCTCTGGTGCCCTTGGCCAGTGTaGGGTTTGCTCCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: WQWLSQSPFHLHDGKALWCPWPV*GLLLQQ
Trigger: TTGCTGAAGGAGCAAACCTCACACTGGCCAAGGGCA...CCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACTGTGACAGCCACTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp ACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTCACTACCCTGTGATCTaGTCGCTGGGGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: TKPYLGTGSRPIQGRDDVHYPVI*SLGDSI
Trigger: GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTG...AACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CTGGAACATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACAAGCTGGTCGATGGTaGCCACTACCCTGTGATCTG +
Preference number: 4 (lower is better)
Translates to: LEHALLAPDTFTAPALNPQAGRW*PLPCDL
Trigger: CAGATCACAGGGTAGTGGGCACCATCGACCAGCTTG...TGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR GCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGCAAGCTGGTCGATGGTaGCCACTACCCTGTGATCTG +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLQAGRW*PLPCDL
Trigger: CAGATCACAGGGTAGTGGGCACCATCGACCAGCTTG...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGAGGAGCCCCCGCCGCTaGCACGGAAGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSRSPRR*HGRSFF
Trigger: GAAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCCT...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp AGCCCACCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCAAGGAGCCCCCGCCGCTaGCACGGAAGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SPPQEEPASPYKGCNKTARSPRR*HGRSFF
Trigger: GAAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCCT...TGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGGTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGTGTTTCAGCCTGGTaGCTGAGGATAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPGVSAW*LRIGGS
Trigger: AGACCCTCCTATCCTCAGGCACCAGGCTGAAACACC...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAGGTGTTTCAGCCTGGTaGCTGAGGATAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SGERALPDACCPLGGDPGGVSAW*LRIGGS
Trigger: AGACCCTCCTATCCTCAGGCACCAGGCTGAAACACC...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp CCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTGCTGCCCTCAGACTTaGCCGCCCCTCCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PYVRKVQSLRGFTTPIPLCCPQT*PPLQER
Trigger: CCGCTCCTGGAGGGGCGGGCAAGTCTGAGGGCAGCA...CAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCGTCGGCAGGGGTGCTaGCCTCAGACTTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRRRQGC*PQTCPP
Trigger: GGGCGGGCAAGTCTGAGGGCAGCACCCCTGCCGACG...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGGCCGTCGGCAGGGGTaGTGCCCTCAGACTTGCCCG +
Preference number: 4 (lower is better)
Translates to: VISSDGNKPETVKHPEWRGRRQG*CPQTCP
Trigger: CGGGCAAGTCTGAGGGCAGCACCCCTGCCGACGGCC...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337018.10
ENST00000452918.7
CDS-3UTR GCA 90 bp CAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTGGCCGTCGGCAGGGGTaGTGCCCTCAGACTTGCCCG +
Preference number: 4 (lower is better)
Translates to: QVWQLFRELQSFGTRVQTGRRQG*CPQTCP
Trigger: CGGGCAAGTCTGAGGGCAGCACCCCTGCCGACGGCC...AGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTAATGTGTCTTCTTTGTaGTCCTGCCCGTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: VFFVLLPVSTQPFPFRGGNVSSL*SCPSAP
Trigger: GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATT...ACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR GCA 90 bp TTGACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGTGGGGGTGGTGGCACTaGAAGGTGACAGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: LTPAKDSQNHLSSNLEERWGWWH*KVTGTR
Trigger: CCTGGTCCCTGTCACCTTGCAGTGCCACCACCCCCA...CCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAGCGACACGAGGATCCTaGAGAGCGGCCTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLATRGS*RAASAE
Trigger: CTCTGCAGAGGCCGCTCTGCAGGATCCTCGTGTCGC...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp GTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTAACAGGCTTCAGCTCTaGTGTACTGGTGGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: VFFVLLPVSTQPFPFRGGNRLQL*CTGGFS
Trigger: CGAGAACCCACCAGTACAGCAGAGCTGAAGCCTGTT...ACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR GCA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACCACCCCAGGCTGCCTaGTGCGTACACGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVPPQAA*CVHADR
Trigger: CCGGTCAGCGTGTACGCAGCAGGCAGCCTGGGGTGG...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR GCA 90 bp GCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGACCGGGTGAGACGCTaGGGCTGCCGAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: APETAETFVFMYTPNRTWDRVRR*GCRGLS
Trigger: GGACAGGCCTCGGCAGCCGCAGCGTCTCACCCGGTC...CCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS-3UTR CCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGGATATCTTCTGTCCCTaGGTTTGTCCCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: APRVAREHFQMPVVLSGVDIFCP*VCPQGH
Trigger: GTGACCCTGGGGACAAACCCAGGGACAGAAGATATC...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGTCCGGCAGAGAGAGTTaGTGGTTTCTAGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: APRVAREHFQMPVVLSGVSGRES*WFLGQE
Trigger: CTCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGA...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGAGCCAGGCCTTCAGGTaGTCTATGTACTCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLSQAFR*SMYSRP
Trigger: TGGGCGAGAGTACATAGACCACCTGAAGGCCTGGCT...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAATCGGCTTTCTTAACCTaGAGGGGACATCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VAREHFQMPVVLSGVTLESAFLT*RGHPLL
Trigger: CAGCAGCGGATGTCCCCTCCAGGTTAAGAAAGCCGA...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGACACGTTTCACAAGCTaGTCGATGGTGCCCACTACC +
Preference number: 4 (lower is better)
Translates to: VSSLCSCPSAPNPSPSEGTRFTS*SMVPTT
Trigger: GGTAGTGGGCACCATCGACCAGCTTGTGAAACGTGT...CCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp GCCCTCACTGCACAGTCTGCTGAGGTCGGCTTCTGGTCGGCTCCTCGCAAGTTCACACGTTTCACAAGCTaGTCGATGGTGCCCACTACC +
Preference number: 4 (lower is better)
Translates to: ALTAQSAEVGFWSAPRKFTRFTS*SMVPTT
Trigger: GGTAGTGGGCACCATCGACCAGCTTGTGAAACGTGT...GAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGCAGACTGTGCAGTGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp AGACAGGCGTGGCCTATTTCCACACGCACATCCACGGAGGCTGGCCTGGAGGCCGAAGAGTTCTCTCTTTaGGAGACAGGCTGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: RQAWPISTRTSTEAGLEAEEFSL*ETGCLR
Trigger: TCGAAGGCAGCCTGTCTCCCAAAGAGAGAACTCTTC...GGCCTCCAGGCCAGCCTCCGTGGATGTGCGTGTGGAAATAGGCCACGCCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTGGGTCTGGGTCCCGGTaGTCGCTCTCCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SDGNKPETVKHPEWRESTGSGSR*SLSSPS
Trigger: GGAAGGCGAGGAGAGCGACCACCGGGACCCAGACCC...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGGGGTCTGGGTCCCGGTaGTCGCTCTCCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: NRALLESNGQSNWKISQRGSGSR*SLSSPS
Trigger: GGAAGGCGAGGAGAGCGACCACCGGGACCCAGACCC...CCTCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGAGGATAGGAGGGTCTaGGTCCCGGTGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: LEAQVLIGQLLLGEVQVLEDRRV*VPVVAL
Trigger: GAGAGCGACCACCGGGACCCAGACCCTCCTATCCTC...AAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGACTGGCGGGCAGTCCTTaGCAGCATCATTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SGERALPDACCPLGGDPGLAGSP*QHHFCL
Trigger: CAGACAGAAATGATGCTGCCAAGGACTGCCCGCCAG...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGCTGGCGGGCAGTCCTTaGCAGCATCATTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLLAGSP*QHHFCL
Trigger: CAGACAGAAATGATGCTGCCAAGGACTGCCCGCCAG...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGAGGTCCAACTGGGTCTaGCGGGCAGTCCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSRSNWV*RAVLGS
Trigger: GCTGCCAAGGACTGCCCGCCAGACCCAGTTGGACCT...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CCTTCCACTTGCATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTTTGCTGAGGTCCAACTGGGTCTaGCGGGCAGTCCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PSTCMMARPSGLGTVRLLRSNWV*RAVLGS
Trigger: GCTGCCAAGGACTGCCCGCCAGACCCAGTTGGACCT...CAGCAAACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGGAGAAGGTCCAACTaGGTCTGGCGGGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: PLPRTHRTISAQTWRSGRRRRSN*VWRAVL
Trigger: AAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCT...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp CCTGAGGAGAAGGTCCAACTGGGTCTGGCGGGCAGTCCTTGGCAGCATCATTTCAGGAGAAGGTCCAACTaGGTCTGGCGGGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: PEEKVQLGLAGSPWQHHFRRRSN*VWRAVL
Trigger: AAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCT...GAAATGATGCTGCCAAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGACTGAGGCTTCTAAGCTaGGGTCCTGAGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SGERALPDACCPLGGDPGLRLLS*GPEEKV
Trigger: GACCTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAG...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp ACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGCTGAGGCTTCTAAGCTaGGGTCCTGAGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TPNRTWALAPGRSRAGMMLRLLS*GPEEKV
Trigger: GACCTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAG...CATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TGGCAGTGGCTGTCACAGTCGCCCTTCCACTTGCATGATGGCAAGGCCCTCTGGCTGAGGCTTCTAAGCTaGGGTCCTGAGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: WQWLSQSPFHLHDGKALWLRLLS*GPEEKV
Trigger: GACCTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAG...CCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACTGTGACAGCCACTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCCACTCCTGCTGGCTTaGGGGATGGGCCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGPLLLA*GMGLRL
Trigger: AAGCCTCAGGCCCATCCCCCAAGCCAGCAGGAGTGG...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGATCTCCTGAGAACCCGTaGTGTCACCACCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: SGERALPDACCPLGGDPGSPENP*CHHHQC
Trigger: ACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGA...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCTCTTCTTTTTGGACATaGGACGACCCCGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTSSFWT*DDPEAC
Trigger: ACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGA...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAATCGGTCAGCTTCTGCTaGGCGAAGTCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VAREHFQMPVVLSGVTLESVSFC*AKSKSL
Trigger: CAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGA...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR CCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCGTAAAGCACCCAGAGTaGCGAGAGAGCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTVKHPE*RESTSR
Trigger: TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR CCA 90 bp CCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCACCGTACTTGGGCACTaGCTCCAGGCCGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: PLSEHIECVFFVLLPVSTTVLGH*LQADPG
Trigger: CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGT...GGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593795.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CTCTCGGGGGTGACCCTGGAACTAGAACGACAGAAAAGACACTGTGACTTTGACCGGCTGGCCGGCAGCTaGCAGCACGCACCATGCTCT +
Preference number: 4 (lower is better)
Translates to: LSGVTLELERQKRHCDFDRLAGS*QHAPCS
Trigger: AGAGCATGGTGCGTGCTGCCAGCTGCCGGCCAGCCG...GTCAAAGTCACAGTGTCTTTTCTGTCGTTCTAGTTCCAGGGTCACCCCCGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp CTGGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAAATGGGTTCCCGGGAATaGGAAAGCAGTTCCAGACGG +
Preference number: 4 (lower is better)
Translates to: LAGPAMGSREWESSSRRKMGSRE*ESSSRR
Trigger: CCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT...TTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp ACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTATTTCCGGTGGCCAATaGCCTGGTCCCGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: TKPYLGTGSRPIQGRDDVISGGQ*PGPENQ
Trigger: CTGATTCTCGGGACCAGGTCATTGGCCACCGGAAAT...AACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGAGCTGTGAGCAGGCCCTaGGTCTCCCCCTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSRAVSRP*VSPFPR
Trigger: CCTAGGAAAGGGGGAGACTCAGGGCCTGCTCACAGC...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GGCATCTCCTCTATCCCGGCTGGCCGGCAGCTGGCAGCACGCACCATGCTCTGCATTTGGTTAGTGCCCTaGGTTTTGGGAGTAATACGA +
Preference number: 4 (lower is better)
Translates to: GISSIPAGRQLAARTMLCIWLVP*VLGVIR
Trigger: TCGTATTACTCCCAAAACTCAGGGCACTAACCAAAT...GCAGAGCATGGTGCGTGCTGCCAGCTGCCGGCCAGCCGGGATAGAGGAGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR TCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTTGGAGCCTTGGCCTaGATTTCAGGTTTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTLGALA*ISGFVG
Trigger: TCCTACGAAACCTGAAATTCAGGCCAAGGCTCCAAG...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp CTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCCTTGGAGCCTTGGCCTaGATTTCAGGTTTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: LLCAPARQHPTLPLPRGFLGALA*ISGFVG
Trigger: TCCTACGAAACCTGAAATTCAGGCCAAGGCTCCAAG...GAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp GACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCATCTAAGCTGGGGTCCTaGGGAGAAGGTCCAACTGGG +
Preference number: 4 (lower is better)
Translates to: DPCQGLTEPSQLKLGGAASKLGS*GEGPTG
Trigger: CCCAGTTGGACCTTCTCCTCAGGACCCCAGCTTAGA...TGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp CGGGGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGCAGGGAGAAGAGGTCTaGGGTGCTTCAGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: RGLINFGPVFGTLAGPAMQGEEV*GASEMS
Trigger: GGACATCTCTGAAGCACCTCAGACCTCTTCTCCCTG...CATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp AGAGAAGAGACAGGCGTGGCCTATTTCCACACGCACATCCACGGAGGCTGGCCTCAGGGAGAAGAGGTCTaGGGTGCTTCAGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: REETGVAYFHTHIHGGWPQGEEV*GASEMS
Trigger: GGACATCTCTGAAGCACCTCAGACCTCTTCTCCCTG...AGGCCAGCCTCCGTGGATGTGCGTGTGGAAATAGGCCACGCCTGTCTCTTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGATCTCTGGTCCCACCTaGGCAACAAATCTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: APRVAREHFQMPVVLSGVISGPT*ATNLAS
Trigger: ACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGAT...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp CTGCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCTGCTGTTTTCTATGCTaGATTGTTCGATCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LPAAYTLTGSLMPFPREPCCFLC*IVRSLV
Trigger: GACCAGAGATCGAACAATTCAGCATAGAAAACAGCA...GGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp GTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACTCACCACCACCAGTGTaGAGGTTGTGCGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: VGGNFSAYQHASEGRRPYSPPPV*RLCGDD
Trigger: GTCATCTCCGCACAACCTTCACACTGGTGGTGGTGA...GTAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp ACATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACAGGACTTTTGGCTCCTGGATaGGACACACTCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: TCSAGSRHLHCPSAESTGLLAPG*DTLSWE
Trigger: CTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAG...TCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR TCA 90 bp CGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCTCAGCACTCACAGGCTaGGGTGCCTTTCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RCHTCEKCRVSEGLQPPSSALTG*GAFRGQ
Trigger: CTGCCCCCGAAAGGCACCTCAGCCTGTGAGTGCTGA...GGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGCCTGCCTCAGCCTCCTaGGTAGCTGGGACTACAAGC +
Preference number: 4 (lower is better)
Translates to: WRIEWSYTQQSAGESGERPASAS*VAGTTS
Trigger: GCTTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGG...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR TCA 90 bp AATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGTTGTCCTCTCGGGGGTaGCCCTGGAACAAACCGTAC +
Preference number: 4 (lower is better)
Translates to: NVSSLCSCPSAPNPSPSELSSRG*PWNKPY
Trigger: GTACGGTTTGTTCCAGGGTCACCCCCGAGAGGACAA...CTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593795.5
CDS-3UTR TCA 90 bp GGCCAAGGAAAATGTCTGTCCCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTTGCAGGTGGAAGGACTaGGGCCCCACCCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: GQGKCLSQKGQRLPAERVCRWKD*GPTHSH
Trigger: GTGGGAGTGGGTGGGGCCTCAGTCCTTCCACCTGCA...AACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACATTTTCCTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR GCA 90 bp GGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTCACTACCCTGTGATCTaGTCGCTGGGGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: GLINFGPVFGTLAGPAMGHYPVI*SLGDSI
Trigger: GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTG...ACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp TTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTTCCCACTACCCTGTGATCTaGTCGCTGGGGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: LINFGPVFGTLAGPAMGSHYPVI*SLGDSI
Trigger: GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTG...GGAACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp ACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGGGGGAGAGGCCTGGAGCCTaGCGGCCGTGGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: THSRNKEYSPSKSWLLRGERPGA*RPWCFS
Trigger: GCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCTC...CCCCCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTAGAGATGTCCACTCCTaGTGGCTTGGGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPRDVHS*WLGGWA
Trigger: GGCCCATCCCCCAAGCCAGCAGGAGTGGACATCTCT...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp CATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACAGGAGCTCGTCTTCAAACTCTaGTTCCCCTTCCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: HALLAPDTFTAPALNPQELVFKL*FPFHEV
Trigger: GACCTCATGGAAGGGGAAGCAGAGTTTGAAGACGAG...CTCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR GCA 90 bp TTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGGACGATGCTGCCCTCAGACTTaGCCGCCCCTCCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: FCWAKSKSLGFFFLDMGRCCPQT*PPLQER
Trigger: CCGCTCCTGGAGGGGCGGGCAAGTCTGAGGGCAGCA...TCGTCCCATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGAATGTGTCTTCTTTGTaGTCCTGCCCGTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLNVSSL*SCPSAP
Trigger: GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATT...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGAGAGCACTTCCAGATaGCTGTTGTCCTCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRESTSR*LLSSRG
Trigger: CCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTC...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp GACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCACCCTGGAACATGCTCTaGTGGCTCCCGACACCTTCA +
Preference number: 4 (lower is better)
Translates to: DPCQGLTEPSQLKLGGAAPWNML*WLPTPS
Trigger: TGAAGGTGTCGGGAGCCAGCAGAGCATGTTCCAGGG...TGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR GCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGTGACCCTGGAACATaGTCTGCTGGCTCCCGACAC +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSGDPGT*SAGSRH
Trigger: GTGTCGGGAGCCAGCAGAGCATGTTCCAGGGTCACC...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR GCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCACTCACAGGCTGAGGTaGCTTTCGGGGGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCTHRLR*LSGAAP
Trigger: TGGCGCTGCCCCCGAAAGGCACCTCAGCCTGTGAGT...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp ATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCCCTTCTGGGAGCTGTaGACGACCTGGGCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: IECVFFVLLPVSTQPFPFPFWEL*TTWALL
Trigger: AAGAAGGGCCCAGGTCGTGCACAGCTCCCAGAAGGG...GAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593795.5
CDS-3UTR GCA 90 bp TGGGCACAAACAGTCCATGAGATGCAGGTGTTTGGGACACACACTGAGACATCAGCCCAGGGCCTGGCATaGCAGGAACTGGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: WAQTVHEMQVFGTHTETSAQGLA*QELGMG
Trigger: GCCCATGCCCAGTTCCTGGCATGCCAGGCCCTGGGC...TGATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCATGGACTGTTTGTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR GCA 90 bp TATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTGCTGCCATGTTATTTTaGCCCGCCGCCGCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: YGNCSESFRALVPECRLGAAMLF*PAAAAA
Trigger: CGCGGCGGCGGCGGCGGGGCAAAATAACATGGCAGC...ACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600377.1
CDS-3UTR GCA 90 bp TGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTAAGGGACACAGCCAACTaGCATCCTCTGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: CWGKFLCIPARQRGQTALRDTAN*HPLWQW
Trigger: CCACTGCCACAGAGGATGGCAGTTGGCTGTGTCCCT...TAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TCTGGCGGGCAGTCCTTGGCAGCATCATTTCTGTCTGGCAGGGATGGTTTTGCCTGCCCCAATTTCCGGTaGCCAATGACCTGGTCCCGA +
Preference number: 4 (lower is better)
Translates to: SGGQSLAASFLSGRDGFACPNFR*PMTWSR
Trigger: TCGGGACCAGGTCATTGGCCACCGGAAATTGGGGCA...GGCAAAACCATCCCTGCCAGACAGAAATGATGCTGCCAAGGACTGCCCGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp CCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGTTAGAGCTCGACCTCTaGCCTGGACTTGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: PAKDSQNHLSSNLEERQELELDL*PGLDCR
Trigger: GCGGCAGTCAAGTCCAGGCCAGAGGTCGAGCTCTAA...CTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp AGACAGGCGTGGCCTATTTCCACACGCACATCCACGGAGGCTGGCCTGGAGGCCAGGAGGGAACCTTCCTaGTCAACGATGTTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: RQAWPISTRTSTEAGLEARREPS*STMFRA
Trigger: AGCTCTAAACATCGTTGACCAGGAAGGTTCCCTCCT...GGCCTCCAGGCCAGCCTCCGTGGATGTGCGTGTGGAAATAGGCCACGCCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGTCCGGCAGAGAGAGTTaGTGGTTTCTAGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLSGRES*WFLGQE
Trigger: CTCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGA...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAACTCTCGCATCGGCTCTaGTTCGGCTTTCTTAACCTG +
Preference number: 4 (lower is better)
Translates to: VAREHFQMPVVLSGVTLELSHRL*FGFLNL
Trigger: CAGGTTAAGAAAGCCGAACCAGAGCCGATGCGAGAG...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp ACCCTGGAACATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATTCACAAGCTGGTCGATaGTGCCCACTACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: TLEHALLAPDTFTAPALNSQAGR*CPLPCD
Trigger: ATCACAGGGTAGTGGGCACCATCGACCAGCTTGTGA...ATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGTTCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR CCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTACACGTTTCACAAGCTaGTCGATGGTGCCCACTACC +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPTRFTS*SMVPTT
Trigger: GGTAGTGGGCACCATCGACCAGCTTGTGAAACGTGT...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTACCCGGGAGTACAGCATaGCCCTCACTGCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLPGSTA*PSLHSL
Trigger: CAGACTGTGCAGTGAGGGCCATGCTGTACTCCCGGG...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGAGAGGATAGGAGGGTCTaGGTCCCGGTGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSREDRRV*VPVVAL
Trigger: GAGAGCGACCACCGGGACCCAGACCCTCCTATCCTC...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGGAGGATAGGAGGGTCTaGGTCCCGGTGGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: FGHGTTPRPVIGNSNWFMEDRRV*VPVVAL
Trigger: GAGAGCGACCACCGGGACCCAGACCCTCCTATCCTC...CATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGCGTGGTGTTTCAGCCTaGTGCCTGAGGATAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRRGVSA*CLRIGG
Trigger: CCCTCCTATCCTCAGGCACCAGGCTGAAACACCACG...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGCTGGCGGGCAGTCCTTaGCAGCATCATTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SCTHQTVLGHWLQADPGQLAGSP*QHHFCL
Trigger: CAGACAGAAATGATGCTGCCAAGGACTGCCCGCCAG...CTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTTCCAGGAGAAGGTCCAACTaGGTCTGGCGGGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LINFGPVFGTLAGPAMGSRRRSN*VWRAVL
Trigger: AAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCT...GGAACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCCACTCCTGCTGGCTTaGGGGATGGGCCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RCHTCEKCRVSEGLQPPSPLLLA*GMGLRL
Trigger: AAGCCTCAGGCCCATCCCCCAAGCCAGCAGGAGTGG...GGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CGGGGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGATCAGCCAGAGGAGCTaGTTCCTCAGCACTCACAGG +
Preference number: 4 (lower is better)
Translates to: RGLINFGPVFGTLAGPAMISQRS*FLSTHR
Trigger: CCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGAT...CATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp ACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTATCAGCCAGAGGAGCTaGTTCCTCAGCACTCACAGG +
Preference number: 4 (lower is better)
Translates to: TKPYLGTGSRPIQGRDDVISQRS*FLSTHR
Trigger: CCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGAT...AACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACCACGCAGCAGAGTGCTaGGGAATCTGGAGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: PQEEPASPYKGCNKTALDHAAEC*GIWRAG
Trigger: CCCCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTG...GTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCCAGGCCCCCACAGGCTaGTTCGTTCGAGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESQAPTG*FVRGLG
Trigger: ACCCAACCCTCGAACGAACCAGCCTGTGGGGGCCTG...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp GTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGTTCGGGACCCTGGCTaGCCCGGCTATGGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: VSFCWAKSKSLGFFFLDMVRDPG*PGYGFP
Trigger: CGGGAACCCATAGCCGGGCCAGCCAGGGTCCCGAAC...CATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GGCAGGCCATGCGCATCTGCCCTTGGCCAGTGTGAGGTTTGCTCCTTCAGCAAAAACTGCCATCCTCTGTaGCAGTGGCTGTCACAGTCG +
Preference number: 4 (lower is better)
Translates to: GRPCASALGQCEVCSFSKNCHPL*QWLSQS
Trigger: CGACTGTGACAGCCACTGCCACAGAGGATGGCAGTT...TTTGCTGAAGGAGCAAACCTCACACTGGCCAAGGGCAGATGCGCATGGCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGGCCGCAGGGTCGGGCTaGCGCGACCCTCGGGTACGT +
Preference number: 4 (lower is better)
Translates to: KGCNKTALDDAIRAKSAEAAGSG*RDPRVR
Trigger: ACGTACCCGAGGGTCGCGCCAGCCCGACCCTGCGGC...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS-3UTR CCA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACCACCTTTCCCCACGTaGCCGCGAAGACCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVPPFPT*PRRPGE
Trigger: CTCACCCGGTCTTCGCGGCCACGTGGGGAAAGGTGG...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS-3UTR CCA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTGCGTCCGCGAGTCTCTaGGAGGCCAAGCCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCASASL*EAKPRG
Trigger: GCCCCTAGGCTTGGCCTCCCAGAGACTCGCGGACGC...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000601879.5
3UTR CAA 72 bp CCACTCCAGGCCCCCACAGGCTGGTTCGTTCGAGGGTaGGGTTATAAACCCAAACTCCATCCTCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: PLQAPTGWFVRG*GYKPKLHPPCW
Trigger: CCAGCATGGAGGATGGAGTTTGGGTTTATAACCCAACCCTCGAACGAACCAGCCTGTGGGGGCCTGGAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452918.7
3UTR CAA 72 bp CCTCTGTGGCAGTGGCTGTCACAGTCGCCCTTCCACTaGCATGATGGCAAGGCCCTCTGGACTAGGAACAGT +
Preference number: 4 (lower is better)
Translates to: PLWQWLSQSPFH*HDGKALWTRNS
Trigger: ACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACTGTGACAGCCACTGCCACAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCGCGGGGACATGCAAATaGACCAACGGTCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVAGTCK*TNGLRS
Trigger: GCTGCGGAGACCGTTGGTTCATTTGCATGTCCCCGC...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337018.10
CDS-3UTR TCA 90 bp CATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCGCTGTGAGCAGGCCCTaGGTCTCCCCCTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: HHPLSEHIECVFFVLLPVAVSRP*VSPFPR
Trigger: CCTAGGAAAGGGGGAGACTCAGGGCCTGCTCACAGC...GACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAACTTGGAGCCTTGGCCTaGATTTCAGGTTTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: VAREHFQMPVVLSGVTLELGALA*ISGFVG
Trigger: TCCTACGAAACCTGAAATTCAGGCCAAGGCTCCAAG...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTCTTGGAGCCTTGGCCTaGATTTCAGGTTTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: GWPGYGFPGMGKQFQTETLGALA*ISGFVG
Trigger: TCCTACGAAACCTGAAATTCAGGCCAAGGCTCCAAG...AGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTAGTGCCCACTACCCTGTaGTCTGCTCGCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVVPTTL*SARWGT
Trigger: TGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCAC...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp TTTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGTGCCCACTACCCTGTaGTCTGCTCGCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: FWTWDDPEACHRQFELVHVPTTL*SARWGT
Trigger: TGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCAC...ATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp GCTCTCCTGAGAACCCGTGGTGTCACCACCACCAGTGTGAAGGTTGTGCGGAGAACAGGCTGCCTTCGATaGCACGTTTCACAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ALLRTRGVTTTSVKVVRRTGCLR*HVSQAG
Trigger: ACCAGCTTGTGAAACGTGTCATCGAAGGCAGCCTGT...TCTCCGCACAACCTTCACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp CTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCTCTAAGCTGGGGTCCTaGGGAGAAGGTCCAACTGGG +
Preference number: 4 (lower is better)
Translates to: LCRNTSNVSSLCSCPSAPSKLGS*GEGPTG
Trigger: CCCAGTTGGACCTTCTCCTCAGGACCCCAGCTTAGA...GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTATCTAAGCTGGGGTCCTaGGGAGAAGGTCCAACTGGG +
Preference number: 4 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLSKLGS*GEGPTG
Trigger: CCCAGTTGGACCTTCTCCTCAGGACCCCAGCTTAGA...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGCAGGGAGAAGAGGTCTaGGGTGCTTCAGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: PAKDSQNHLSSNLEERQEQGEEV*GASEMS
Trigger: GGACATCTCTGAAGCACCTCAGACCTCTTCTCCCTG...CTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTTCACCACCACCAGTGTaGAGGTTGTGCGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIASPPPV*RLCGDD
Trigger: GTCATCTCCGCACAACCTTCACACTGGTGGTGGTGA...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCATGCCAACCTTCAATaGCTTGCTGCTGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTHANLQ*LAADPL
Trigger: AAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATG...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGGCAGCGCCACCTTCTaGAGGGGAACCAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPGSATF*RGTKTD
Trigger: ATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCC...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR TCA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCTCAGCACTCACAGGCTaGGGTGCCTTTCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGSALTG*GAFRGQ
Trigger: CTGCCCCCGAAAGGCACCTCAGCCTGTGAGTGCTGA...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AGCCCACCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCAGCTCAGTTCTGTGGCTaGTGCCCTAGCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: SPPQEEPASPYKGCNKTAAQFCG*CPSHCC
Trigger: ACAGCAGTGGCTAGGGCATCAGCCACAGAACTGAGC...TGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGGTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR TCA 90 bp CCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGCTGGTCTCAAACTCCTaGCCTCAGGTGATCCATCCG +
Preference number: 4 (lower is better)
Translates to: PAKDSQNHLSSNLEERQELVSNS*PQVIHP
Trigger: CGGATGGATCACCTGAGGTCAGGAGTTTGAGACCAG...CTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR TCA 90 bp CTGGGGAATCTGGAGAGCGGGGGCGATCACATGCCTGGAAATAGAGCAGCTGCACTCCATCCATTCACCTaGCCCATGGCCAACATGGAA +
Preference number: 4 (lower is better)
Translates to: LGNLESGGDHMPGNRAAALHPFT*PMANME
Trigger: TTCCATGTTGGCCATGGGTCAGGTGAATGGATGGAG...TGCAGCTGCTCTATTTCCAGGCATGTGATCGCCCCCGCTCTCCAGATTCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR TCA 90 bp GCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCAGGATCAGCTTCTCATCTaGAGATGCCTTCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: ACCVHADRLPDALSEGAQDQLLI*RCLLFK
Trigger: TTTAAACAGAAGGCATCTTCAGATGAGAAGCTGATC...CTGGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAAGGTTCCCCTAGGGAGTaGAAAAGAGAGTCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: VAREHFQMPVVLSGVTLEGSPRE*KRESVV
Trigger: CACAACTGACTCTCTTTTTCACTCCCTAGGGGAACC...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR TCA 90 bp TCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCACGTCCTTGGTTATCGTaGGCGTCCGCGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SVGTHRMCLLCAPARQHPRPWLS*ASASLW
Trigger: CCAGAGACTCGCGGACGCTCACGATAACCAAGGACG...TGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR GCA 90 bp ACCCTGGAACATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATGAGGGAGCTATATCTTaGAGGCCGACAGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: TLEHALLAPDTFTAPALNEGAIS*RPTASK
Trigger: CTTAGAAGCTGTCGGCCTGCAAGATATAGCTCCCTC...ATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGTTCCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR GCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTCACTACCCTGTGATCTaGTCGCTGGGGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPHYPVI*SLGDSI
Trigger: GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTG...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCACTACCCTGTGATCTaGTCGCTGGGGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGHYPVI*SLGDSI
Trigger: GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTG...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp TGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACAAGCTGGTCGATGGTaGCCACTACCCTGTGATCTG +
Preference number: 4 (lower is better)
Translates to: CWGKFLCIPARQRGQTALQAGRW*PLPCDL
Trigger: CAGATCACAGGGTAGTGGGCACCATCGACCAGCTTG...TAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGGTGGGGGTGTTTCAGCCTGGTaGCTGAGGATAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QGLTEPSQLKLGGAAGGGGVSAW*LRIGGS
Trigger: AGACCCTCCTATCCTCAGGCACCAGGCTGAAACACC...CCCACCTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR GCA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAACTCGTCTTCAAACTCTaGTTCCCCTTCCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: VAREHFQMPVVLSGVTLELVFKL*FPFHEV
Trigger: GACCTCATGGAAGGGGAAGCAGAGTTTGAAGACGAG...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp ATCCTCTTCCGAGGGAAGCAGGTACCTGAGGAGGCCTGTGACAAGGCAGGTGCTTTATCGGTCAGCTTCTaGTGGGCGAAGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: ILFRGKQVPEEACDKAGALSVSF*WAKSKS
Trigger: GGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAA...AGCACCTGCCTTGTCACAGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp ATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCGCGGGGGCGATCACATaGCTGGAAATAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: IECVFFVLLPVSTQPFPFAGAIT*LEIEQL
Trigger: CAGCTGCTCTATTTCCAGGCATGTGATCGCCCCCGC...GAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR GCA 90 bp GCCAGTCCAACTGGAAAATCAGCCAGAGGAGCTGGTTCCTCAGCACTCACAGGCATGATCTCAGCTCACTaGAACCTCTGCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: ASPTGKSARGAGSSALTGMISAH*NLCLPG
Trigger: ACCGGGGAGGCAGAGGTTGCAGTGAGCTGAGATCAT...GCCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGATTTTCCAGTTGGACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCACTTTGACACGGCTGTaGCACCACACATCACGCGCG +
Preference number: 4 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSTLTRL*HHTSRA
Trigger: CGCGCGTGATGTGTGGTGGCACAGCCGTGTCAAAGT...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCTGGCTTTTGAGGGGGTaGCCAGAGGGCCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESWLLRG*PEGPGY
Trigger: GTAACCAGGGCCCTCTGGGCACCCCCTCAAAAGCCA...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR CCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTTGCCCCAATTTCCGGTaGCCAATGACCTGGTCCCGA +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPCPNFR*PMTWSR
Trigger: TCGGGACCAGGTCATTGGCCACCGGAAATTGGGGCA...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTTAGAGCTCGACCTCTaGCCTGGACTTGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSLELDL*PGLDCR
Trigger: GCGGCAGTCAAGTCCAGGCCAGAGGTCGAGCTCTAA...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGTTAGAGCTCGACCTCTaGCCTGGACTTGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGLELDL*PGLDCR
Trigger: GCGGCAGTCAAGTCCAGGCCAGAGGTCGAGCTCTAA...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTAGGAGGGAACCTTCCTaGTCAACGATGTTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: VFFVLLPVSTQPFPFRGGRREPS*STMFRA
Trigger: AGCTCTAAACATCGTTGACCAGGAAGGTTCCCTCCT...ACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGGATATCTTCTGTCCCTaGGTTTGTCCCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PLPRTHRTISAQTWRSGRDIFCP*VCPQGH
Trigger: GTGACCCTGGGGACAAACCCAGGGACAGAAGATATC...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGGGCAGAGAGAGTTGGTaGTTTCTAGGGCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: PLPRTHRTISAQTWRSGRGRESW*FLGQEP
Trigger: TGGCTCTTGCCCTAGAAACCACCAACTCTCTCTGCC...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp TGCCTTTCGGGGGCAGCGCCACCTTCTGAAGGGGAACCAAGACAGATTTGGAGGGGCAGAGAGAGTTGGTaGTTTCTAGGGCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: CLSGAAPPSEGEPRQIWRGRESW*FLGQEP
Trigger: TGGCTCTTGCCCTAGAAACCACCAACTCTCTCTGCC...CCTCCAAATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCCCCCGAAAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTGAAGAGTTCTCTCTTTaGGAGACAGGCTGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: GWPGYGFPGMGKQFQTETEEFSL*ETGCLR
Trigger: TCGAAGGCAGCCTGTCTCCCAAAGAGAGAACTCTTC...AGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp TACAGCCAATACAAGTGGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTAGCCGCTGAGGTCGGCTTCTaGTCGGCTCCTCGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: YSQYKWHFPLSSVADALAAEVGF*SAPRKF
Trigger: GAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGC...GGCTAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCCCGGGAGTACAGCATaGCCCTCACTGCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCPGSTA*PSLHSL
Trigger: CAGACTGTGCAGTGAGGGCCATGCTGTACTCCCGGG...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTGGAGCCTGCCGGCCGTaGTGTTTCAGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCGACRP*CFSLVP
Trigger: AGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCC...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGTCGCCCTTCCACTTGCATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTCTGGCGGGCAGTCCTTaGCAGCATCATTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SRPSTCMMARPSGLGTVRLAGSP*QHHFCL
Trigger: CAGACAGAAATGATGCTGCCAAGGACTGCCCGCCAG...ACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCAGGAGAAGGTCCAACTaGGTCTGGCGGGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSRRRSN*VWRAVL
Trigger: AAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCT...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCAGGAGAAGGTCCAACTaGGTCTGGCGGGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: PLSEHIECVFFVLLPVSTRRRSN*VWRAVL
Trigger: AAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCT...GGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CGGGGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGTCAATGTCAGCAGATaGGCAGGGAGAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RGLINFGPVFGTLAGPAMVNVSR*AGRRGL
Trigger: CAGACCTCTTCTCCCTGCCCATCTGCTGACATTGAC...CATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTCAGGCATCACCTCTaGGCTCTCCAGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RCHTCEKCRVSEGLQPPSLRHHL*ALQLSL
Trigger: GAGGCTGAGCTGGAGAGCCCAGAGGTGATGCCTGAG...GGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCCACTCTCTTGGGAGCTaGAATCATGCCAACCTTCAA +
Preference number: 4 (lower is better)
Translates to: LLCAPARQHPTLPLPRGFHSLGS*NHANLQ
Trigger: TTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTG...GAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CCA 90 bp ACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTCTTCTTTTTGGACATaGGACGACCCCGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TKPYLGTGSRPIQGRDDVSSFWT*DDPEAC
Trigger: ACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGA...AACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTTGGGTTTCTTCTTTTTaGACATGGGACGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: GWPGYGFPGMGKQFQTETWVSSF*TWDDPE
Trigger: CTCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCA...AGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCACACCAAACCGTACTTaGGCACTGGCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LCRNTSNVSSLCSCPSAPTPNRT*ALAPGR
Trigger: TCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT...GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CTGCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCTCATCAACTCAAGTATaGCAACTGTTCAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LPAAYTLTGSLMPFPREPSSTQV*QLFREL
Trigger: AAGCTCTCTGAACAGTTGCCATACTTGAGTTGATGA...GGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp CCCTTTGACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGAGTGCTGGGGAATCTaGAGAGCGGGGGCGATCACA +
Preference number: 4 (lower is better)
Translates to: PFDPCQGLTEPSQLKLGGECWGI*RAGAIT
Trigger: TGTGATCGCCCCCGCTCTCCAGATTCCCCAGCACTC...TCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCACGCAGCAGAGTGCTaGGGAATCTGGAGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGHAAEC*GIWRAG
Trigger: CCCCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTG...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCAGAGCCCCTGGGGGTaGTGGCACTGCAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGQSPWG*WHCKVT
Trigger: TGTCACCTTGCAGTGCCACCACCCCCAGGGGCTCTG...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp GCCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACGCACCATGCTCTGCTaGCTCCCGACACCTTCACTG +
Preference number: 4 (lower is better)
Translates to: ASETSAPETAETFVFMYTRTMLC*LPTPSL
Trigger: CAGTGAAGGTGTCGGGAGCCAGCAGAGCATGGTGCG...TGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp CTTTACAGCCAATACAAGTGGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTAGGCACGGAGGGCCAGTaGCATCTCCTCTATCCCGGC +
Preference number: 4 (lower is better)
Translates to: LYSQYKWHFPLSSVADALGTEGQ*HLLYPG
Trigger: GCCGGGATAGAGGAGATGCCACTGGCCCTCCGTGCC...TAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp CCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCTGGGCCCTTCTTTTTaGACATGGGACGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: PLSEHIECVFFVLLPVSTLGPSF*TWDDPE
Trigger: CTCGGGGTCGTCCCATGTCCAAAAAGAAGGGCCCAG...GGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593795.5
CDS-3UTR CCA 90 bp TCTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTGGCAGGGGACTGCAATaGGACAAGAGACCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: SGSPGSYRSASAGRSPSPGRGLQ*DKRPVL
Trigger: CAGAACGGGTCTCTTGTCCCATTGCAGTCCCCTGCC...AGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTAACTGCCATCCTCTGTaGCAGTGGCTGTCACAGTCG +
Preference number: 4 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIANCHPL*QWLSQS
Trigger: CGACTGTGACAGCCACTGCCACAGAGGATGGCAGTT...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGCCACTGGCATCCATGTaGTATCGTTTGGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: APRVAREHFQMPVVLSGVPLASM*YRLAFS
Trigger: AGAAAAAGCCAAACGATATCACATGGATGCCAGTGG...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCGAGCTACAGATCCACTaGGGGAGTATCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSELQIH*GSICHR
Trigger: GCGATGGCAGATACTCCCTCAGTGGATCTGTAGCTC...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAGAGCTACAGATCCACTaGGGGAGTATCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLELQIH*GSICHR
Trigger: GCGATGGCAGATACTCCCTCAGTGGATCTGTAGCTC...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGCCGGCATCTCTAGAGTaGGCTACAGATCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSPASLE*ATDPLR
Trigger: CCTCAGTGGATCTGTAGCTCACTCTAGAGATGCCGG...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGAGTAGCTGTCATCACTaGTGGAAGGGTTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLSSCHH*WKGCLI
Trigger: GATCAAGCAACCCTTCCATCAGTGATGACAGCTACT...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTATTTCCGGTGGCCAATaGCCTGGTCCCGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: AQVLIGQLLLGEVQVLGFISGGQ*PGPENQ
Trigger: CTGATTCTCGGGACCAGGTCATTGGCCACCGGAAAT...AAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGCAAATTTCCAGTCCTaGGAACGGAAATGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPANFQS*ERKCPN
Trigger: ATTGGGGCATTTCCGTTCTCAGGACTGGAAATTTGC...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp TGGCAGTGGCTGTCACAGTCGCCCTTCCACTTGCATGATGGCAAGGCCCTCTGGGCAAATTTCCAGTCCTaGGAACGGAAATGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: WQWLSQSPFHLHDGKALWANFQS*ERKCPN
Trigger: ATTGGGGCATTTCCGTTCTCAGGACTGGAAATTTGC...CCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACTGTGACAGCCACTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CTTTACAGCCAATACAAGTGGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTACCTCTGGCCTGGACTTaGCTGCCGCCCCTAAGCACA +
Preference number: 4 (lower is better)
Translates to: LYSQYKWHFPLSSVADALPLAWT*LPPLST
Trigger: TGTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGG...TAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR TCA 90 bp GCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCACCTCTGGCCTGGACTTaGCTGCCGCCCCTAAGCACA +
Preference number: 4 (lower is better)
Translates to: AETFVFMYTPNRTWALAPPLAWT*LPPLST
Trigger: TGTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGG...TGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATCCTCTGGCCTGGACTTaGCTGCCGCCCCTAAGCACA +
Preference number: 4 (lower is better)
Translates to: QRASELWYPSADLVITGNPLAWT*LPPLST
Trigger: TGTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGG...ATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTGGGGACATCCGCTGCTaGCTAGCCAGGCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCGDIRC*LARPSG
Trigger: ACCTGAAGGCCTGGCTAGTCAGCAGCGGATGTCCCC...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp ATGTCTGTCCCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTGGTGGTTTCTAGGGGACATCCGCTGCTaGCTAGCCAGGCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: MSVPKGPKTSGRESWWFLGDIRC*LARPSG
Trigger: ACCTGAAGGCCTGGCTAGTCAGCAGCGGATGTCCCC...TAGAAACCACCAACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR TCA 90 bp CCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGGACATCCGCTGCTaGCTAGCCAGGCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PPQRLQRRLFSCTHQTVLGDIRC*LARPSG
Trigger: ACCTGAAGGCCTGGCTAGTCAGCAGCGGATGTCCCC...AAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp ACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACGGGGACATCCGCTGCTaGCTAGCCAGGCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TALDDAIRAKSAESQRVYGDIRC*LARPSG
Trigger: ACCTGAAGGCCTGGCTAGTCAGCAGCGGATGTCCCC...GTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CATGGGCACAAACAGTCCATGAGATGCAGGTGTTTGGGACACACACTGAGACATGTGCCCACTACCCTGTaGTCTGCTCGCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: HGHKQSMRCRCLGHTLRHVPTTL*SARWGT
Trigger: TGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCAC...ATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCATGGACTGTTTGTGCCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp CCCTTTGACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGAAGGAGTTTCTTCTTaGGGTTGCGGACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PFDPCQGLTEPSQLKLGGEGVSS*GCGQPG
Trigger: CCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTC...TCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCGAAGGAGTTTCTTCTTaGGGTTGCGGACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCEGVSS*GCGQPG
Trigger: CCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTC...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCTCTAAGCTGGGGTCCTaGGGAGAAGGTCCAACTGGG +
Preference number: 4 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVSKLGS*GEGPTG
Trigger: CCCAGTTGGACCTTCTCCTCAGGACCCCAGCTTAGA...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp TGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACTCTAAGCTGGGGTCCTaGGGAGAAGGTCCAACTGGG +
Preference number: 4 (lower is better)
Translates to: CRNTSNVSSLCSCPSAPNSKLGS*GEGPTG
Trigger: CCCAGTTGGACCTTCTCCTCAGGACCCCAGCTTAGA...GTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp GCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCAGGGAGAAGAGGTCTaGGGTGCTTCAGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: AQVLIGQLLLGEVQVLGFQGEEV*GASEMS
Trigger: GGACATCTCTGAAGCACCTCAGACCTCTTCTCCCTG...AAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp AGAGAAGAGACAGGCGTGGCCTATTTCCACACGCACATCCACGGAGGCTGGCCTATCTCTGGTCCCACCTaGGCAACAAATCTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: REETGVAYFHTHIHGGWPISGPT*ATNLAS
Trigger: ACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGAT...AGGCCAGCCTCCGTGGATGTGCGTGTGGAAATAGGCCACGCCTGTCTCTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTTCACCACCACCAGTGTaGAGGTTGTGCGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: LEAQVLIGQLLLGEVQVLSPPPV*RLCGDD
Trigger: GTCATCTCCGCACAACCTTCACACTGGTGGTGGTGA...AAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTATCACCACCACCAGTGTaGAGGTTGTGCGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLSPPPV*RLCGDD
Trigger: GTCATCTCCGCACAACCTTCACACTGGTGGTGGTGA...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp ATGTCTGTCCCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTGGTGGTTTCTACTGCTTCCCCTTCCATaGGGTCCACGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: MSVPKGPKTSGRESWWFLLLPLP*GPRGSP
Trigger: AGGAGAGCCCCGTGGACCTCATGGAAGGGGAAGCAG...TAGAAACCACCAACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR TCA 90 bp ACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACCTGCTTCCCCTTCCATaGGGTCCACGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TALDDAIRAKSAESQRVYLLPLP*GPRGSP
Trigger: AGGAGAGCCCCGTGGACCTCATGGAAGGGGAAGCAG...GTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGCTGCTTCCCCTTCCATaGGGTCCACGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: APETAETFVFMYTPNRTWLLPLP*GPRGSP
Trigger: AGGAGAGCCCCGTGGACCTCATGGAAGGGGAAGCAG...CCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGGAACAGGCTTCAGCTCTGCTGTACTGGTGGGTTCTCGCCTCTTTTGGCTCCTCTTTTGGCTCCTGGATaGGACACACTCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GNRLQLCCTGGFSPLLAPLLAPG*DTLSWE
Trigger: CTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAG...AGGAGCCAAAAGAGGCGAGAACCCACCAGTACAGCAGAGCTGAAGCCTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR TCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTAGGAGAGGTGTCCTCTaGGAGTGTAGGGGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPRRGVL*ECRGLS
Trigger: AGAAAGCCCCCTACACTCTCAGAGGACACCTCTCCT...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp ATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCTCAGCACTCACAGGCTaGGGTGCCTTTCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: MGSREWESSSRRKLHRNTSALTG*GAFRGQ
Trigger: CTGCCCCCGAAAGGCACCTCAGCCTGTGAGTGCTGA...GGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR TCA 90 bp ACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCTCGGGTCAATGGGCTaGGCCCCGCTTGGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TAETFVFMYTPNRTWALALGSMG*APLGAP
Trigger: TGGAGCTCCAAGCGGGGCTCAGCCCATTGACCCGAG...AGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR TCA 90 bp CCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGAAGCCATCTTGGCTGTaGAGGAGCCAAGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PYVRKVQSLRGFTTPIPLKPSWL*RSQAAG
Trigger: GCCTGCCGCTTGGCTCCTTCACAGCCAAGATGGCTT...CAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR TCA 90 bp ACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGGGGTTGTCCTCTCGGGGGTaGCCCTGGAATTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: THSRNKEYSPSKSWLLRGLSSRG*PWNWAL
Trigger: CAGTGCCCAATTCCAGGGTCACCCCCGAGAGGACAA...CCCCCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR TCA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGAGCCGCGAAGACCGGGTaGGACGCTGCGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRAAKTG*DAAAAE
Trigger: CTCGGCAGCCGCAGCGTCTCACCCGGTCTTCGCGGC...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS-3UTR GCA 90 bp CTGGAACATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCATGTAATTCGTCTGGCTaGCATGTTATTTTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LEHALLAPDTFTAPALNPCNSSG*HVILPP
Trigger: CGGGGGCAAAATAACATGGCAGCCAGACGAATTACA...TGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR GCA 90 bp ACATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACAGGAGTCATCATACATCTCTaGTCTGGATCTTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: TCSAGSRHLHCPSAESTGVIIHL*SGSWDC
Trigger: GCAGTCCCAAGATCCAGAGCAGAGATGTATGATGAC...TCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR GCA 90 bp TCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGAGGGAGCTATATCTTaGAGGCCGACAGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SCTHQTVLGHWLQADPGQEGAIS*RPTASK
Trigger: CTTAGAAGCTGTCGGCCTGCAAGATATAGCTCCCTC...CTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GAGGGCCCTGGTTACCTCGGAATGCCTTACCCAGCAGGAACTAAGCTCAGTATTCACTACCCTGTGATCTaGTCGCTGGGGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: EGPGYLGMPYPAGTKLSIHYPVI*SLGDSI
Trigger: GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTG...AATACTGAGCTTAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAGGGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTCAAGCTGGTCGATGGTaGCCACTACCCTGTGATCTG +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPQAGRW*PLPCDL
Trigger: CAGATCACAGGGTAGTGGGCACCATCGACCAGCTTG...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp TGGTGGGTTCTCGCCTCTTTTGGCTCCTGGATGAGACACACTCTCTTGGGAGCTCAAGCTGGTCGATGGTaGCCACTACCCTGTGATCTG +
Preference number: 4 (lower is better)
Translates to: WWVLASFGSWMRHTLLGAQAGRW*PLPCDL
Trigger: CAGATCACAGGGTAGTGGGCACCATCGACCAGCTTG...AGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGAGGCGAGAACCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR GCA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGCAAGCTGGTCGATGGTaGCCACTACCCTGTGATCTG +
Preference number: 4 (lower is better)
Translates to: WRIEWSYTQQSAGESGERQAGRW*PLPCDL
Trigger: CAGATCACAGGGTAGTGGGCACCATCGACCAGCTTG...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp TCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGTTCTCGCTCATCCGCTaGATTTCTGCCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: SCTHQTVLGHWLQADPGQFSLIR*ISANFS
Trigger: GCTGAAGTTGGCAGAAATGCAGCGGATGAGCGAGAA...CTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAAGGAGCCCCCGCCGCTaGCACGGAAGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VISSDGNKPETVKHPEWRRSPRR*HGRSFF
Trigger: GAAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCCT...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp GCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAAGGAGCCCCCGCCGCTaGCACGGAAGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: AETFVFMYTPNRTWALAPRSPRR*HGRSFF
Trigger: GAAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCCT...TGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAATGGGAGCTGGAATCATaGCAACCTTCAATGACTTGC +
Preference number: 4 (lower is better)
Translates to: VAREHFQMPVVLSGVTLEWELES*QPSMTC
Trigger: GCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCA...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp TTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCTTATCGGTCAGCTTCTaGTGGGCGAAGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: FHVHTKPYLGTGSRPIQGLSVSF*WAKSKS
Trigger: GGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAA...GCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTTCTTTGTGCTCCTaGCCGTCAGCACCCAACCCT +
Preference number: 4 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSSSLCS*PSAPNP
Trigger: AGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGA...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTATCTTCTTTGTGCTCCTaGCCGTCAGCACCCAACCCT +
Preference number: 4 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLSSLCS*PSAPNP
Trigger: AGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGA...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCATCTTCTTTGTGCTCCTaGCCGTCAGCACCCAACCCT +
Preference number: 4 (lower is better)
Translates to: GSRPIQGRDDVLRAIAASSSLCS*PSAPNP
Trigger: AGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGA...TGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTAATGTGTCTTCTTTGTaGTCCTGCCCGTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIANVSSL*SCPSAP
Trigger: GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATT...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCGAGAGCACTTCCAGATaGCTGTTGTCCTCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESESTSR*LLSSRG
Trigger: CCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTC...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp ACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACACTCACAGGCTGAGGTaGCTTTCGGGGGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: TALDDAIRAKSAESQRVYTHRLR*LSGAAP
Trigger: TGGCGCTGCCCCCGAAAGGCACCTCAGCCTGTGAGT...GTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp ACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTGCTTTGGTACCCGAGTaGAGACTTGGTAATTACCGG +
Preference number: 4 (lower is better)
Translates to: TKPYLGTGSRPIQGRDDVALVPE*RLGNYR
Trigger: CCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGC...AACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTGCTGCCATGTTATTTTaGCCTTGGTTCGCGGTCGTC +
Preference number: 4 (lower is better)
Translates to: GLINFGPVFGTLAGPAMGAAMLF*PWFAVV
Trigger: GACGACCGCGAACCAAGGGCAAAATAACATGGCAGC...ACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR GCA 90 bp GGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACACACTGTGGGGGAAATTTCTCTaGATACCAGCACGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GNFSAYQHASEGRRPYTLWGKFL*IPARQR
Trigger: TCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCA...CAGTGTGTAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGACATACATCTCTGCTCTaGATCTTGGGACTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: SGERALPDACCPLGGDPGHTSLL*ILGLPL
Trigger: TAAGGGCAGTCCCAAGATCCAGAGCAGAGATGTATG...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGTATCTGCCATCGCTGTaGACGTCATCATACATCTCT +
Preference number: 4 (lower is better)
Translates to: APRVAREHFQMPVVLSGVYLPSL*TSSYIS
Trigger: AGAGATGTATGATGACGTCCACAGCGATGGCAGATA...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GCCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACATGCCCCAATTTCCGGTaGCCAATGACCTGGTCCCGA +
Preference number: 4 (lower is better)
Translates to: ASETSAPETAETFVFMYTCPNFR*PMTWSR
Trigger: TCGGGACCAGGTCATTGGCCACCGGAAATTGGGGCA...TGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TACAGCCAATACAAGTGGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTAGCCTTAGAGCTCGACCTCTaGCCTGGACTTGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: YSQYKWHFPLSSVADALALELDL*PGLDCR
Trigger: GCGGCAGTCAAGTCCAGGCCAGAGGTCGAGCTCTAA...GGCTAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp CTGGAACATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCAAGGAGGGAACCTTCCTaGTCAACGATGTTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LEHALLAPDTFTAPALNPRREPS*STMFRA
Trigger: AGCTCTAAACATCGTTGACCAGGAAGGTTCCCTCCT...TGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR CCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTAGGAGGGAACCTTCCTaGTCAACGATGTTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPRREPS*STMFRA
Trigger: AGCTCTAAACATCGTTGACCAGGAAGGTTCCCTCCT...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CTGGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAAAGGAGGGAACCTTCCTaGTCAACGATGTTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LAGPAMGSREWESSSRRKRREPS*STMFRA
Trigger: AGCTCTAAACATCGTTGACCAGGAAGGTTCCCTCCT...TTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCGAGGGATCTTCTGAATaGGGAACTGGATATCTTCTG +
Preference number: 4 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTEGSSE*GTGYLL
Trigger: CAGAAGATATCCAGTTCCCCATTCAGAAGATCCCTC...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGTCCGGCAGAGAGAGTTaGTGGTTTCTAGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRSGRES*WFLGQE
Trigger: CTCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGA...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGCCAGGCCTTCAGGTaGTCTATGTACTCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLSQAFR*SMYSRP
Trigger: TGGGCGAGAGTACATAGACCACCTGAAGGCCTGGCT...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTTCGGCTTTCTTAACCTaGAGGGGACATCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AQVLIGQLLLGEVQVLGFSAFLT*RGHPLL
Trigger: CAGCAGCGGATGTCCCCTCCAGGTTAAGAAAGCCGA...AAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGTCGGCTTTCTTAACCTaGAGGGGACATCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WRIEWSYTQQSAGESGERSAFLT*RGHPLL
Trigger: CAGCAGCGGATGTCCCCTCCAGGTTAAGAAAGCCGA...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTTCACAAGCTGGTCGATaGTGCCCACTACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIASQAGR*CPLPCD
Trigger: ATCACAGGGTAGTGGGCACCATCGACCAGCTTGTGA...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp ATCCTCTTCCGAGGGAAGCAGGTACCTGAGGAGGCCTGTGACAAGGCAGGTGCTGAAGAGTTCTCTCTTTaGGAGACAGGCTGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: ILFRGKQVPEEACDKAGAEEFSL*ETGCLR
Trigger: TCGAAGGCAGCCTGTCTCCCAAAGAGAGAACTCTTC...AGCACCTGCCTTGTCACAGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GGAACATCAACTTTGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCTGAGGTCGGCTTCTaGTCGGCTCCTCGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GTSTLLGEISLHTSTPARAEVGF*SAPRKF
Trigger: GAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGC...CCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACAAAGTTGATGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp ACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGGGGCCCGGGAGTACAGCATaGCCCTCACTGCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: THSRNKEYSPSKSWLLRGPGSTA*PSLHSL
Trigger: CAGACTGTGCAGTGAGGGCCATGCTGTACTCCCGGG...CCCCCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCCCGGGAGTACAGCATaGCCCTCACTGCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGPGSTA*PSLHSL
Trigger: CAGACTGTGCAGTGAGGGCCATGCTGTACTCCCGGG...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAACGTGGTGTTTCAGCCTaGTGCCTGAGGATAGGAGGG +
Preference number: 4 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTERGVSA*CLRIGG
Trigger: CCCTCCTATCCTCAGGCACCAGGCTGAAACACCACG...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTGGAGCCTGCCGGCCGTaGTGTTTCAGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ASELWYPSADLVITGNLSGACRP*CFSLVP
Trigger: AGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCC...AGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTGGCGGGCAGTCCTTaGCAGCATCATTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: AQVLIGQLLLGEVQVLGFLAGSP*QHHFCL
Trigger: CAGACAGAAATGATGCTGCCAAGGACTGCCCGCCAG...AAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTACTGGCGGGCAGTCCTTaGCAGCATCATTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLLAGSP*QHHFCL
Trigger: CAGACAGAAATGATGCTGCCAAGGACTGCCCGCCAG...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTAGGTCCAACTGGGTCTaGCGGGCAGTCCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCRSNWV*RAVLGS
Trigger: GCTGCCAAGGACTGCCCGCCAGACCCAGTTGGACCT...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAAGGTCCAACTGGGTCTaGCGGGCAGTCCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: AETFVFMYTPNRTWALAPRSNWV*RAVLGS
Trigger: GCTGCCAAGGACTGCCCGCCAGACCCAGTTGGACCT...TGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGCTGAGGCTTCTAAGCTaGGGTCCTGAGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSLRLLS*GPEEKV
Trigger: GACCTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAG...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp ATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCTGAGGCTTCTAAGCTaGGGTCCTGAGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: IECVFFVLLPVSTQPFPFLRLLS*GPEEKV
Trigger: GACCTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAG...GAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CATGGGCACAAACAGTCCATGAGATGCAGGTGTTTGGGACACACACTGAGACATCCACTCCTGCTGGCTTaGGGGATGGGCCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: HGHKQSMRCRCLGHTLRHPLLLA*GMGLRL
Trigger: AAGCCTCAGGCCCATCCCCCAAGCCAGCAGGAGTGG...ATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCATGGACTGTTTGTGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGTCAATGTCAGCAGATaGGCAGGGAGAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PCQGLTEPSQLKLGGAAGVNVSR*AGRRGL
Trigger: CAGACCTCTTCTCCCTGCCCATCTGCTGACATTGAC...TCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp GGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTGTCAATGTCAGCAGATaGGCAGGGAGAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GLINFGPVFGTLAGPAMGVNVSR*AGRRGL
Trigger: CAGACCTCTTCTCCCTGCCCATCTGCTGACATTGAC...ACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGGCTCAGGCATCACCTCTaGGCTCTCCAGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QLLLGEVQVLGFLLFGHGLRHHL*ALQLSL
Trigger: GAGGCTGAGCTGGAGAGCCCAGAGGTGATGCCTGAG...CCCATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTCACTCTCTTGGGAGCTaGAATCATGCCAACCTTCAA +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPHSLGS*NHANLQ
Trigger: TTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTG...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGTCGGTCAGCTTCTGCTaGGCGAAGTCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSSVSFC*AKSKSL
Trigger: CAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGA...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR CCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTTCGGTCAGCTTCTGCTaGGCGAAGTCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPSVSFC*AKSKSL
Trigger: CAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGA...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR CCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGATCTCAGCTCAAACTTaGAGGAGCGGCAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSISAQT*RSGRRW
Trigger: CCACCTCCTGCCGCTCCTCCAAGTTTGAGCTGAGAT...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp TATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTACCGTACTTGGGCACTaGCTCCAGGCCGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: YGNCSESFRALVPECRLGTVLGH*LQADPG
Trigger: CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGT...ACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCACCGTACTTGGGCACTaGCTCCAGGCCGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: PIQGRDDVLRAIAASRLITVLGH*LQADPG
Trigger: CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGT...GATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACAACACCAAACCGTACTTaGGCACTGGCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: ASETSAPETAETFVFMYTTPNRT*ALAPGR
Trigger: TCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT...TGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGGAGTGCTGGGGAATCTaGAGAGCGGGGGCGATCACA +
Preference number: 4 (lower is better)
Translates to: PYVRKVQSLRGFTTPIPLECWGI*RAGAIT
Trigger: TGTGATCGCCCCCGCTCTCCAGATTCCCCAGCACTC...CAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCACGCAGCAGAGTGCTaGGGAATCTGGAGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRHAAEC*GIWRAG
Trigger: CCCCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTG...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTAGCCTCCTGAGTAGCTaGGACTACAAGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SDGNKPETVKHPEWRESTSLLSS*DYKRPP
Trigger: TGGCGGGCGCTTGTAGTCCCAGCTACTCAGGAGGCT...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCAGCTACAGAAGCCACTaGAAGCAAGCAGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSSYRSH*KQAEPL
Trigger: CAGGGGCTCTGCTTGCTTCCAGTGGCTTCTGTAGCT...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGTTCGTTCGAGGGTTaGGTTATAAACCCAAACTCC +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPGSFEG*VINPNS
Trigger: GGAGTTTGGGTTTATAACCCAACCCTCGAACGAACC...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGCATTCACCTGACCCATaGCCAACATGGAAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRHSPDP*PTWKLS
Trigger: CGACAGCTTCCATGTTGGCCATGGGTCAGGTGAATG...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp GGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTGGGTTTAATAAACTTTaGGCCTGTGTTCGGGACCCT +
Preference number: 4 (lower is better)
Translates to: GWPGYGFPGMGKQFQTETGFNKL*ACVRDP
Trigger: AGGGTCCCGAACACAGGCCCAAAGTTTATTAAACCC...AGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCATGGCATGCCAGGAACTaGGCATGGGCACAAACAGTC +
Preference number: 4 (lower is better)
Translates to: GSRPIQGRDDVLRAIAASWHARN*AWAQTV
Trigger: GACTGTTTGTGCCCATGCCCAGTTCCTGGCATGCCA...TGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp TTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCGATGGCAAGGCCCTCTaGACTAGGAACAGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: FHVHTKPYLGTGSRPIQGDGKAL*TRNSPF
Trigger: AAACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATC...GCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGACCACTGGCATCCATGTaGTATCGTTTGGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SGERALPDACCPLGGDPGPLASM*YRLAFS
Trigger: AGAAAAAGCCAAACGATATCACATGGATGCCAGTGG...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp CGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCCGGCATCTCTAGAGTaGGCTACAGATCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: RCHTCEKCRVSEGLQPPSPASLE*ATDPLR
Trigger: CCTCAGTGGATCTGTAGCTCACTCTAGAGATGCCGG...GGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGCTGTGAGCAGGCCCTaGGTCTCCCCCTTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: ESFRALVPECRLGNYREFAVSRP*VSPFPR
Trigger: CCTAGGAAAGGGGGAGACTCAGGGCCTGCTCACAGC...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGTCACATTTCTCAATGTaGCAAGTTTCCCAACACCCC +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLSHFSM*QVSQHP
Trigger: GGGGTGTTGGGAAACTTGTCACATTGAGAAATGTGA...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp TTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCCCCAGAGGGATCTTCTaGATGGGGAACTGGATATCT +
Preference number: 4 (lower is better)
Translates to: FHVHTKPYLGTGSRPIQGPRGIF*MGNWIS
Trigger: AGATATCCAGTTCCCCATTCAGAAGATCCCTCTGGG...GCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCACAGGCTGCCTTCGATaGCACGTTTCACAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSTGCLR*HVSQAG
Trigger: ACCAGCTTGTGAAACGTGTCATCGAAGGCAGCCTGT...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTAGAAGGAGTTTCTTCTTaGGGTTGCGGACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVEGVSS*GCGQPG
Trigger: CCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTC...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCAGGGAGAAGAGGTCTaGGGTGCTTCAGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCQGEEV*GASEMS
Trigger: GGACATCTCTGAAGCACCTCAGACCTCTTCTCCCTG...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTATCTCTGGTCCCACCTaGGCAACAAATCTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GLINFGPVFGTLAGPAMGISGPT*ATNLAS
Trigger: ACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGAT...ACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp TTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTTCCATCTCTGGTCCCACCTaGGCAACAAATCTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LINFGPVFGTLAGPAMGSISGPT*ATNLAS
Trigger: ACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGAT...GGAACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCTGTGCGGAGATGACGTaGAACAAATTGATGGACATA +
Preference number: 4 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTCAEMT*NKLMDI
Trigger: TATGTCCATCAATTTGTTTCACGTCATCTCCGCACA...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCTCACCACCACCAGTGTaGAGGTTGTGCGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESSPPPV*RLCGDD
Trigger: GTCATCTCCGCACAACCTTCACACTGGTGGTGGTGA...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp ACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCTGCTTCCCCTTCCATaGGGTCCACGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TAETFVFMYTPNRTWALALLPLP*GPRGSP
Trigger: AGGAGAGCCCCGTGGACCTCATGGAAGGGGAAGCAG...AGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTCTAAGTGATTTCCAGTaGTGGAAACAAGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPLSDFQ*WKQARD
Trigger: GTCTCTGGCTTGTTTCCATCACTGGAAATCACTTAG...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR TCA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGATCACATCAGTGGTTTTaGTCTATTTGTTGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: SGERALPDACCPLGGDPGSHQWF*SICWPA
Trigger: AGCGGGCCAACAAATAGATCAAAACCACTGATGTGA...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR TCA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAAAGCCATCTTGGCTGTaGAGGAGCCAAGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VISSDGNKPETVKHPEWRKPSWL*RSQAAG
Trigger: GCCTGCCGCTTGGCTCCTTCACAGCCAAGATGGCTT...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR TCA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAGCCTGCTGGAGGTTATaGTCGGGGTTTAATAAACTT +
Preference number: 4 (lower is better)
Translates to: SGERALPDACCPLGGDPGACWRL*SGFNKL
Trigger: AAGTTTATTAAACCCCGATCATAACCTCCAGCAGGC...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR TCA 90 bp GCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCACGTCCTTGGTTATCGTaGGCGTCCGCGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: AETFVFMYTPNRTWALAPRPWLS*ASASLW
Trigger: CCAGAGACTCGCGGACGCTCACGATAACCAAGGACG...TGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS-3UTR GCA 90 bp ATCCTCTTCCGAGGGAAGCAGGTACCTGAGGAGGCCTGTGACAAGGCAGGTGCTTGTAATTCGTCTGGCTaGCATGTTATTTTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: ILFRGKQVPEEACDKAGACNSSG*HVILPP
Trigger: CGGGGGCAAAATAACATGGCAGCCAGACGAATTACA...AGCACCTGCCTTGTCACAGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR GCA 90 bp CCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGCACTACCCTGTGATCTaGTCGCTGGGGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: PYVRKVQSLRGFTTPIPLHYPVI*SLGDSI
Trigger: GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTG...CAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GCCAGTCCAACTGGAAAATCAGCCAGAGGAGCTGGTTCCTCAGCACTCACAGGCTTCTCGCTCATCCGCTaGATTTCTGCCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: ASPTGKSARGAGSSALTGFSLIR*ISANFS
Trigger: GCTGAAGTTGGCAGAAATGCAGCGGATGAGCGAGAA...GCCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGATTTTCCAGTTGGACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCGGTGTTTCAGCCTGGTaGCTGAGGATAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCGVSAW*LRIGGS
Trigger: AGACCCTCCTATCCTCAGGCACCAGGCTGAAACACC...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp CCCCGTATAAATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACGAGAGGCCTGGAGCCTaGCGGCCGTGGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PRINSGEQRENTICDRFHERPGA*RPWCFS
Trigger: GCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCTC...GTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GAGACATGTAAATCTGGGGCCGATTTCATCTGTTTAATGATTACTCCCCACCCGGAGAGGCCTGGAGCCTaGCGGCCGTGGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: ETCKSGADFICLMITPHPERPGA*RPWCFS
Trigger: GCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCTC...CGGGTGGGGAGTAATCATTAAACAGATGAAATCGGCCCCAGATTTACATGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp TCTGCATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCAGAGATGTCCACTCCTaGTGGCTTGGGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: SASSSVGTHRMCLLCAPARDVHS*WLGGWA
Trigger: GGCCCATCCCCCAAGCCAGCAGGAGTGGACATCTCT...GGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR GCA 90 bp GTGAGAGAAAACTTGAGCAAGAGAAGAGACAGGCGTGGCCTATTTCCACACGCAAGAGATGTCCACTCCTaGTGGCTTGGGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: VRENLSKRRDRRGLFPHARDVHS*WLGGWA
Trigger: GGCCCATCCCCCAAGCCAGCAGGAGTGGACATCTCT...TGCGTGTGGAAATAGGCCACGCCTGTCTCTTCTCTTGCTCAAGTTTTCTCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGTCTAGCCAGTTTCTCTaGAGTCTCCATTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: APRVAREHFQMPVVLSGVSSQFL*SLHCLH
Trigger: ATGAAGACAATGGAGACTGCAGAGAAACTGGCTAGA...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp CATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACAGGAGTCTAGCCAGTTTCTCTaGAGTCTCCATTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: HALLAPDTFTAPALNPQESSQFL*SLHCLH
Trigger: ATGAAGACAATGGAGACTGCAGAGAAACTGGCTAGA...CTCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR GCA 90 bp TCTGGCGGGCAGTCCTTGGCAGCATCATTTCTGTCTGGCAGGGATGGTTTTGCCCTCGTCTTCAAACTCTaGTTCCCCTTCCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: SGGQSLAASFLSGRDGFALVFKL*FPFHEV
Trigger: GACCTCATGGAAGGGGAAGCAGAGTTTGAAGACGAG...GGCAAAACCATCCCTGCCAGACAGAAATGATGCTGCCAAGGACTGCCCGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR GCA 90 bp AAAGATGAGGATATTTACAGGCCCAAGGCCCTGCAGAAGGAAAAGGATTTGAAGTGCTGCCCTCAGACTTaGCCGCCCCTCCAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: KDEDIYRPKALQKEKDLKCCPQT*PPLQER
Trigger: CCGCTCCTGGAGGGGCGGGCAAGTCTGAGGGCAGCA...CTTCAAATCCTTTTCCTTCTGCAGGGCCTTGGGCCTGTAAATATCCTCATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGTTATCGGTCAGCTTCTaGTGGGCGAAGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSLSVSF*WAKSKS
Trigger: GGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAA...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGTTATCGGTCAGCTTCTaGTGGGCGAAGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: WRIEWSYTQQSAGESGERLSVSF*WAKSKS
Trigger: GGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAA...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp GGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCATTATCGGTCAGCTTCTaGTGGGCGAAGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GSRPIQGRDDVLRAIAASLSVSF*WAKSKS
Trigger: GGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAA...TGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATCTTCTTTGTGCTCCTaGCCGTCAGCACCCAACCCT +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSRSSLCS*PSAPNP
Trigger: AGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGA...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp CATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCGAGAGCACTTCCAGATaGCTGTTGTCCTCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: HHPLSEHIECVFFVLLPVESTSR*LLSSRG
Trigger: CCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTC...GACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCGTGCCCTTTGACCCCTaGCAAGGACTCACAGAACCA +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESVPFDP*QGLTEP
Trigger: TGGTTCTGTGAGTCCTTGGCAGGGGTCAAAGGGCAC...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR GCA 90 bp AGTCGCCCTTCCACTTGCATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTCTCCGCCCCAGAGACTaGAGAGACGTTTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: SRPSTCMMARPSGLGTVRLRPRD*RDVCFH
Trigger: ATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAG...ACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp TGGCAGTGGCTGTCACAGTCGCCCTTCCACTTGCATGATGGCAAGGCCCTCTGGCATACGTGCGAAAAGTaGAGAGTCTCAGAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: WQWLSQSPFHLHDGKALWHTCEK*RVSEGL
Trigger: TAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG...CCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACTGTGACAGCCACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTAGCGGGGGCGATCACATaGCTGGAAATAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVAGAIT*LEIEQL
Trigger: CAGCTGCTCTATTTCCAGGCATGTGATCGCCCCCGC...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCAGGCTTGAGCCACTGTaGCTGGCCCAAAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGRLEPL*LAQSQD
Trigger: ATCCTGGCTTTGGGCCAGGCACAGTGGCTCAAGCCT...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGAGCTGGGATTACAGGTaGCCGCTACCACGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRSWDYR*PLPRLA
Trigger: AGCCAGGCGTGGTAGCGGGCACCTGTAATCCCAGCT...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp CAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTCTGCAGAGCGGCCTCTaGAGAGAGCAAGGACAGCCT +
Preference number: 4 (lower is better)
Translates to: QVWQLFRELQSFGTRVQTLQSGL*REQGQP
Trigger: AGGCTGTCCTTGCTCTCTGCAGAGGCCGCTCTGCAG...AGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp CTGGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAATTACAGCCTCACCACTaGCATCCATGTGATATCGTT +
Preference number: 4 (lower is better)
Translates to: LAGPAMGSREWESSSRRKLQPHH*HPCDIV
Trigger: AACGATATCACATGGATGCCAGTGGTGAGGCTGTAA...TTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp ACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGGGGTGCCCCAATTTCCGGTaGCCAATGACCTGGTCCCGA +
Preference number: 4 (lower is better)
Translates to: THSRNKEYSPSKSWLLRGCPNFR*PMTWSR
Trigger: TCGGGACCAGGTCATTGGCCACCGGAAATTGGGGCA...CCCCCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGGCAGAGAGAGTTGGTaGTTTCTAGGGCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPGRESW*FLGQEP
Trigger: TGGCTCTTGCCCTAGAAACCACCAACTCTCTCTGCC...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AGCCCACCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCAGGCAGAGAGAGTTGGTaGTTTCTAGGGCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SPPQEEPASPYKGCNKTAGRESW*FLGQEP
Trigger: TGGCTCTTGCCCTAGAAACCACCAACTCTCTCTGCC...TGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGGTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp GGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCATCCGGCAGAGAGAGTTaGTGGTTTCTAGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: GSRPIQGRDDVLRAIAASSGRES*WFLGQE
Trigger: CTCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGA...TGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCCTTTGACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGATCGGCTTTCTTAACCTaGAGGGGACATCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PFDPCQGLTEPSQLKLGGSAFLT*RGHPLL
Trigger: CAGCAGCGGATGTCCCCTCCAGGTTAAGAAAGCCGA...TCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCTCGGCTTTCTTAACCTaGAGGGGACATCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESSAFLT*RGHPLL
Trigger: CAGCAGCGGATGTCCCCTCCAGGTTAAGAAAGCCGA...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCTCGGCTTTCTTAACCTaGAGGGGACATCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RCHTCEKCRVSEGLQPPSSAFLT*RGHPLL
Trigger: CAGCAGCGGATGTCCCCTCCAGGTTAAGAAAGCCGA...GGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCTCACAAGCTGGTCGATaGTGCCCACTACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: LCRNTSNVSSLCSCPSAPSQAGR*CPLPCD
Trigger: ATCACAGGGTAGTGGGCACCATCGACCAGCTTGTGA...GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGGAAGAGTTCTCTCTTTaGGAGACAGGCTGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: PAKDSQNHLSSNLEERQEEEFSL*ETGCLR
Trigger: TCGAAGGCAGCCTGTCTCCCAAAGAGAGAACTCTTC...CTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp TCTGCATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCCCGGGAGTACAGCATaGCCCTCACTGCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: SASSSVGTHRMCLLCAPAPGSTA*PSLHSL
Trigger: CAGACTGTGCAGTGAGGGCCATGCTGTACTCCCGGG...GGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp GCAGGCCATAAGCAAAGGTGTGACACTCTTCAGAAGCCGGTCTTGAAGTCTCATCCCGGGAGTACAGCATaGCCCTCACTGCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: AGHKQRCDTLQKPVLKSHPGSTA*PSLHSL
Trigger: CAGACTGTGCAGTGAGGGCCATGCTGTACTCCCGGG...ATGAGACTTCAAGACCGGCTTCTGAAGAGTGTCACACCTTTGCTTATGGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp TCCATGAGATGCAGGTGTTTGGGACACACACTGAGACATCAAAGAAAGGGAAAAGGGTCTGGGTCCCGGTaGTCGCTCTCCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SMRCRCLGHTLRHQRKGKGSGSR*SLSSPS
Trigger: GGAAGGCGAGGAGAGCGACCACCGGGACCCAGACCC...TTTTCCCTTTCTTTGATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGGGAGCCTGCCGGCCGTaGTGTTTCAGCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: KGCNKTALDDAIRAKSAEGACRP*CFSLVP
Trigger: AGGCACCAGGCTGAAACACCACGGCCGGCAGGCTCC...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTGGCGGGCAGTCCTTaGCAGCATCATTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVLAGSP*QHHFCL
Trigger: CAGACAGAAATGATGCTGCCAAGGACTGCCCGCCAG...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTCCCCCGTATAAACCACTCCTGCTGGCTTaGGGGATGGGCCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: WYPSADLVITGNLSPPYKPLLLA*GMGLRL
Trigger: AAGCCTCAGGCCCATCCCCCAAGCCAGCAGGAGTGG...TTTATACGGGGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTCAATGTCAGCAGATaGGCAGGGAGAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPVNVSR*AGRRGL
Trigger: CAGACCTCTTCTCCCTGCCCATCTGCTGACATTGAC...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGAATTGTTCGATCTCTaGTCCCACCTGAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPELFDL*SHLSNK
Trigger: TTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTC...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCTCTCCTGAGAACCCGTaGTGTCACCACCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCSPENP*CHHHQC
Trigger: ACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGA...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGATAGGCAATTCGAACTaGTTCATGGACTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: APRVAREHFQMPVVLSGVIGNSN*FMDFWL
Trigger: GAGCCAAAAGTCCATGAACCAGTTCGAATTGCCTAT...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACAGGAGATAGGCAATTCGAACTaGTTCATGGACTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: HALLAPDTFTAPALNPQEIGNSN*FMDFWL
Trigger: GAGCCAAAAGTCCATGAACCAGTTCGAATTGCCTAT...CTCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTTCTTTTTGGACATaGGACGACCCCGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSSSFWT*DDPEAC
Trigger: ACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGA...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGATCTTCTTTTTGGACATaGGACGACCCCGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PAMGSREWESSSRRKLHRSSFWT*DDPEAC
Trigger: ACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGA...TCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTTGGGTTTCTTCTTTTTaGACATGGGACGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIAWVSSF*TWDDPE
Trigger: CTCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCA...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTTGGGTTTCTTCTTTTTaGACATGGGACGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: GLINFGPVFGTLAGPAMGWVSSF*TWDDPE
Trigger: CTCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCA...ACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAATCGGTCAGCTTCTGCTaGGCGAAGTCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTESVSFC*AKSKSL
Trigger: CAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGA...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp TTGACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGGTAAAGCACCCAGAGTaGCGAGAGAGCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LTPAKDSQNHLSSNLEERVKHPE*RESTSR
Trigger: TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC...CCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp ACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTACAGCCAATACAAGTaGCATTTCCCGCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TPNRTWALAPGRSRAGMMYSQYK*HFPLSS
Trigger: AGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTA...CATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp GGGAACAGGCTTCAGCTCTGCTGTACTGGTGGGTTCTCGCCTCTTTTGGCTCCTGCCTCTTTTGGCTCCTaGATGAGACACACTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GNRLQLCCTGGFSPLLAPASFGS*MRHTLL
Trigger: CAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGAGGC...AGGAGCCAAAAGAGGCGAGAACCCACCAGTACAGCAGAGCTGAAGCCTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp AGCCCACCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCAGGTTCTCGCCTCTTTTaGCTCCTGGATGAGACACAC +
Preference number: 4 (lower is better)
Translates to: SPPQEEPASPYKGCNKTAGSRLF*LLDETH
Trigger: GTGTGTCTCATCCAGGAGCCAAAAGAGGCGAGAACC...TGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGGTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp TGGGCACAAACAGTCCATGAGATGCAGGTGTTTGGGACACACACTGAGACATCATGGCTGGCCCGGCTATaGGTTCCCGGGAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: WAQTVHEMQVFGTHTETSWLARL*VPGNGK
Trigger: TTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCA...TGATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCATGGACTGTTTGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp GCGACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGGTGCCCAGAGGGCCCTaGTTACCTCGGAATGCCTTA +
Preference number: 4 (lower is better)
Translates to: ATHSRNKEYSPSKSWLLRVPRGP*LPRNAL
Trigger: TAAGGCATTCCGAGGTAACCAGGGCCCTCTGGGCAC...CCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTCACCCTCGAAGAGCTaGCTTTTGAGGGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PYVRKVQSLRGFTTPIPLSPSKS*LLRGCP
Trigger: TGGGCACCCCCTCAAAAGCCAGCTCTTCGAGGGTGA...CAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAATGGCATGCCAGGAACTaGGCATGGGCACAAACAGTC +
Preference number: 4 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTEWHARN*AWAQTV
Trigger: GACTGTTTGTGCCCATGCCCAGTTCCTGGCATGCCA...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
3UTR CAA 72 bp TGTAGGGGGCTTTCTAGGTTCAAGGAGATGTGCCCTTaGACCCCTGCCAAGGACTCACAGAACCATCTCAGC +
Preference number: 4 (lower is better)
Translates to: CRGLSRFKEMCP*TPAKDSQNHLS
Trigger: GCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAAAGGGCACATCTCCTTGAACCTAGAAAGCCCCCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
3UTR CAA 72 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTaGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RDVCFHVHTKPY*GTGSRPIQGRD
Trigger: ATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CAA 72 bp CCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTaGTTTTCATGTACACACCAAACCGTACTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PAKPPPQRLQRR*FSCTHQTVLGH
Trigger: GTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CAA 72 bp ATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTaGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: IILCRNTSNVSS*CSCPSAPNPSP
Trigger: AGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR TCA 90 bp TCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGCCACTGGCATCCATGTaGTATCGTTTGGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SCTHQTVLGHWLQADPGQPLASM*YRLAFS
Trigger: AGAAAAAGCCAAACGATATCACATGGATGCCAGTGG...CTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CTCTCGGGGGTGACCCTGGAACTAGAACGACAGAAAAGACACTGTGACTTTGACGAGCTACAGATCCACTaGGGGAGTATCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: LSGVTLELERQKRHCDFDELQIH*GSICHR
Trigger: GCGATGGCAGATACTCCCTCAGTGGATCTGTAGCTC...GTCAAAGTCACAGTGTCTTTTCTGTCGTTCTAGTTCCAGGGTCACCCCCGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR TCA 90 bp GCATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTGAGCTACAGATCCACTaGGGGAGTATCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: ASSSVGTHRMCLLCAPARELQIH*GSICHR
Trigger: GCGATGGCAGATACTCCCTCAGTGGATCTGTAGCTC...ACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp CAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGGTGGGAGTAGCTGTCATCACTaGTGGAAGGGTTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: QGLTEPSQLKLGGAAGGGSSCHH*WKGCLI
Trigger: GATCAAGCAACCCTTCCATCAGTGATGACAGCTACT...CCCACCTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp CAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGGTGGGGCAAATTTCCAGTCCTaGGAACGGAAATGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: QGLTEPSQLKLGGAAGGGANFQS*ERKCPN
Trigger: ATTGGGGCATTTCCGTTCTCAGGACTGGAAATTTGC...CCCACCTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGCAAATTTCCAGTCCTaGGAACGGAAATGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRANFQS*ERKCPN
Trigger: ATTGGGGCATTTCCGTTCTCAGGACTGGAAATTTGC...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAAAAACTATACTCCTGTaGCCAAGAGGACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SGERALPDACCPLGGDPGKTILL*PRGLLR
Trigger: TCTCAAGAGTCCTCTTGGTCACAGGAGTATAGTTTT...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGTCACATTTCTCAATGTaGCAAGTTTCCCAACACCCC +
Preference number: 4 (lower is better)
Translates to: PLPRTHRTISAQTWRSGRSHFSM*QVSQHP
Trigger: GGGGTGTTGGGAAACTTGTCACATTGAGAAATGTGA...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTATTTGGTTAGTGCCCTaGGTTTTGGGAGTAATACGA +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPIWLVP*VLGVIR
Trigger: TCGTATTACTCCCAAAACTCAGGGCACTAACCAAAT...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCCCAGAGGGATCTTCTaGATGGGGAACTGGATATCT +
Preference number: 4 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGPRGIF*MGNWIS
Trigger: AGATATCCAGTTCCCCATTCAGAAGATCCCTCTGGG...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GCCCTCACTGCACAGTCTGCTGAGGTCGGCTTCTGGTCGGCTCCTCGCAAGTTCGGAATCCTGCCCATTTaGTTATTTCTATCCCAAATC +
Preference number: 4 (lower is better)
Translates to: ALTAQSAEVGFWSAPRKFGILPI*LFLSQI
Trigger: GATTTGGGATAGAAATAATCAAATGGGCAGGATTCC...GAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGCAGACTGTGCAGTGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR TCA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAATTCAGAAGCCGGTCTTaGAGTCTCATTATGTACTTG +
Preference number: 4 (lower is better)
Translates to: VAREHFQMPVVLSGVTLEFRSRS*SLIMYL
Trigger: CAAGTACATAATGAGACTTCAAGACCGGCTTCTGAA...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCTGGAAACGCAGCAGGTaGGGGAGCTATATCTTGCAG +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCWKRSR*GSYILQ
Trigger: CTGCAAGATATAGCTCCCTCACCTGCTGCGTTTCCA...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp CTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCCTTGGAGCCTTGGCCTaGATTTCAGGTTTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: LCRNTSNVSSLCSCPSAPLGALA*ISGFVG
Trigger: TCCTACGAAACCTGAAATTCAGGCCAAGGCTCCAAG...GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGAACAGGCTGCCTTCGATaGCACGTTTCACAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSRTGCLR*HVSQAG
Trigger: ACCAGCTTGTGAAACGTGTCATCGAAGGCAGCCTGT...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATGAAGGAGTTTCTTCTTaGGGTTGCGGACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GNCSESFRALVPECRLGNEGVSS*GCGQPG
Trigger: CCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTC...ATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGAAGGAGTTTCTTCTTaGGGTTGCGGACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LTEHFWRAMASPTGKSAREGVSS*GCGQPG
Trigger: CCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTC...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCATCTCTGGTCCCACCTaGGCAACAAATCTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LCRNTSNVSSLCSCPSAPISGPT*ATNLAS
Trigger: ACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGAT...GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGTGCTGTTTTCTATGCTaGATTGTTCGATCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLCCFLC*IVRSLV
Trigger: GACCAGAGATCGAACAATTCAGCATAGAAAACAGCA...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTTGCTGTTTTCTATGCTaGATTGTTCGATCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: QSGERALPDACCPLGGDPCCFLC*IVRSLV
Trigger: GACCAGAGATCGAACAATTCAGCATAGAAAACAGCA...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AAGCTGGTCGATGGTGCCCACTACCCTGTGATCTGCTCGCTGGGGGACAGCATCTGTGCGGAGATGACGTaGAACAAATTGATGGACATA +
Preference number: 4 (lower is better)
Translates to: KLVDGAHYPVICSLGDSICAEMT*NKLMDI
Trigger: TATGTCCATCAATTTGTTTCACGTCATCTCCGCACA...GATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCACCATCGACCAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR TCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTCATGCCAACCTTCAATaGCTTGCTGCTGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIAHANLQ*LAADPL
Trigger: AAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATG...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp TGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACATGCCAACCTTCAATaGCTTGCTGCTGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: CWGKFLCIPARQRGQTALHANLQ*LAADPL
Trigger: AAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATG...TAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATTGTCCTCTCGGGGGTaGCCCTGGAACTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSRLSSRG*PWNYLL
Trigger: CAACAAATAGTTCCAGGGTCACCCCCGAGAGGACAA...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337018.10
CDS-3UTR TCA 90 bp TGCCTTTCGGGGGCAGCGCCACCTTCTGAAGGGGAACCAAGACAGATTTGGAGGCTAAGTGATTTCCAGTaGTGGAAACAAGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: CLSGAAPPSEGEPRQIWRLSDFQ*WKQARD
Trigger: GTCTCTGGCTTGTTTCCATCACTGGAAATCACTTAG...CCTCCAAATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCCCCCGAAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR TCA 90 bp GCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAAGGAGATGTGCCCTTTaGCCCCTGCCAAGGACTCAC +
Preference number: 4 (lower is better)
Translates to: AETFVFMYTPNRTWALAPRRCAL*PLPRTH
Trigger: GTGAGTCCTTGGCAGGGGTCAAAGGGCACATCTCCT...TGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR TCA 90 bp ATCCTCTTCCGAGGGAAGCAGGTACCTGAGGAGGCCTGTGACAAGGCAGGTGCTTCACATCAGTGGTTTTaGTCTATTTGTTGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: ILFRGKQVPEEACDKAGASHQWF*SICWPA
Trigger: AGCGGGCCAACAAATAGATCAAAACCACTGATGTGA...AGCACCTGCCTTGTCACAGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR TCA 90 bp GGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGC +
Preference number: 4 (lower is better)
Translates to: GSRPIQGRDDVLRAIAASDPGQG*CFKGNC
Trigger: GCAATTGCCCTTAAAACATCATCCCTGCCCTGGATC...TGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGC +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSDPGQG*CFKGNC
Trigger: GCAATTGCCCTTAAAACATCATCCCTGCCCTGGATC...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR TCA 90 bp CGCCTCTTTTGGCTCCTGGATGAGACACACTCTCTTGGGAGCTGGAATCATGCCGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGC +
Preference number: 4 (lower is better)
Translates to: RLFWLLDETHSLGSWNHADPGQG*CFKGNC
Trigger: GCAATTGCCCTTAAAACATCATCCCTGCCCTGGATC...GGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR TCA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTTGGAGAGAGTGCGCTTaGTCCACGCTGCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCWRECA*STLQVC
Trigger: ACACACCTGCAGCGTGGATCAAGCGCACTCTCTCCA...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGTGTAATTCGTCTGGCTaGCATGTTATTTTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRCNSSG*HVILPP
Trigger: CGGGGGCAAAATAACATGGCAGCCAGACGAATTACA...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
CDS-3UTR GCA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGTCTAAGATTTTCTCCTaGCGGAAAGAAGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PLPRTHRTISAQTWRSGRSKIFS*RKEEAK
Trigger: CTTGGCCTCTTCTTTCCGGCAGGAGAAAATCTTAGA...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR GCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGAGGGAGCTATATCTTaGAGGCCGACAGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSEGAIS*RPTASK
Trigger: CTTAGAAGCTGTCGGCCTGCAAGATATAGCTCCCTC...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp AGCCCACCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCAGAGGGAGCTATATCTTaGAGGCCGACAGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SPPQEEPASPYKGCNKTAEGAIS*RPTASK
Trigger: CTTAGAAGCTGTCGGCCTGCAAGATATAGCTCCCTC...TGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGGTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp CCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGGGTGTTTCAGCCTGGTaGCTGAGGATAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PYVRKVQSLRGFTTPIPLGVSAW*LRIGGS
Trigger: AGACCCTCCTATCCTCAGGCACCAGGCTGAAACACC...CAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAGAGATGTCCACTCCTaGTGGCTTGGGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: PLLTKAVIRQHLTMPYVRRDVHS*WLGGWA
Trigger: GGCCCATCCCCCAAGCCAGCAGGAGTGGACATCTCT...TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTTGGGAGCTGGAATCATaGCAACCTTCAATGACTTGC +
Preference number: 4 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIAWELES*QPSMTC
Trigger: GCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCA...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCTTATCGGTCAGCTTCTaGTGGGCGAAGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESLSVSF*WAKSKS
Trigger: GGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAA...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp GCATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTTCTTCTTTGTGCTCCTaGCCGTCAGCACCCAACCCT +
Preference number: 4 (lower is better)
Translates to: ASSSVGTHRMCLLCAPARSSLCS*PSAPNP
Trigger: AGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGA...ACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR GCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCAATGTGTCTTCTTTGTaGTCCTGCCCGTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESNVSSL*SCPSAP
Trigger: GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATT...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp ATCCTCTTCCGAGGGAAGCAGGTACCTGAGGAGGCCTGTGACAAGGCAGGTGCTCATACGTGCGAAAAGTaGAGAGTCTCAGAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: ILFRGKQVPEEACDKAGAHTCEK*RVSEGL
Trigger: TAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG...AGCACCTGCCTTGTCACAGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR GCA 90 bp CCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTTACACGCAGCAGAGTaGTGGGGAATCTGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: PYVRKVQSLRGFTTPIPLLHAAE*WGIWRA
Trigger: CGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAA...CAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTCTCAACCTCCTAAAGTaGTGGGATTACAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIALNLLK*WDYRLE
Trigger: CTCAAGCCTGTAATCCCAGCACTTTAGGAGGTTGAG...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCCTGGTTACCTCGGAATaGCTTACCCAGCAGGAACTA +
Preference number: 4 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSLVTSE*LTQQEL
Trigger: TAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAG...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR GCA 90 bp GCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTGGTTACCTCGGAATaGCTTACCCAGCAGGAACTA +
Preference number: 4 (lower is better)
Translates to: AQVLIGQLLLGEVQVLGFLVTSE*LTQQEL
Trigger: TAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAG...AAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGAGGGACACAGCCAACTaGCATCCTCTGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRRDTAN*HPLWQW
Trigger: CCACTGCCACAGAGGATGGCAGTTGGCTGTGTCCCT...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGCATACATCTCTGCTCTaGATCTTGGGACTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRHTSLL*ILGLPL
Trigger: TAAGGGCAGTCCCAAGATCCAGAGCAGAGATGTATG...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACATACATCTCTGCTCTaGATCTTGGGACTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: CWGKFLCIPARQRGQTALHTSLL*ILGLPL
Trigger: TAAGGGCAGTCCCAAGATCCAGAGCAGAGATGTATG...TAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGCTTTCTCAATCAGCCTaGAAGATCCAAAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRLSQSA*KIQSPP
Trigger: TGGGGGACTTTGGATCTTCCAGGCTGATTGAGAAAG...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGAGATATCTTCTGTCCCTaGGTTTGTCCCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSRDIFCP*VCPQGH
Trigger: GTGACCCTGGGGACAAACCCAGGGACAGAAGATATC...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GCGACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGAGCCAGGCCTTCAGGTaGTCTATGTACTCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: ATHSRNKEYSPSKSWLLRSQAFR*SMYSRP
Trigger: TGGGCGAGAGTACATAGACCACCTGAAGGCCTGGCT...CCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGACTCTCGCATCGGCTCTaGTTCGGCTTTCTTAACCTG +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSRLSHRL*FGFLNL
Trigger: CAGGTTAAGAAAGCCGAACCAGAGCCGATGCGAGAG...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACACACTGGGACTACTTGGAGCCTTaGCCTGAATTTCAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: EISLHTSTPARADGLTHWDYLEP*PEFQVS
Trigger: CGAAACCTGAAATTCAGGCCAAGGCTCCAAGTAGTC...CCAGTGTGTAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CGGGGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGATCACTCAGACTACTTaGAGCCTTGGCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: RGLINFGPVFGTLAGPAMITQTT*SLGLNF
Trigger: GAAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGAT...CATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACACGTTTCACAAGCTaGTCGATGGTGCCCACTACC +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESTRFTS*SMVPTT
Trigger: GGTAGTGGGCACCATCGACCAGCTTGTGAAACGTGT...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGAAGAGTTCTCTCTTTaGGAGACAGGCTGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPEEFSL*ETGCLR
Trigger: TCGAAGGCAGCCTGTCTCCCAAAGAGAGAACTCTTC...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTGCTGAGGTCGGCTTCTaGTCGGCTCCTCGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: ATVQRASELWYPSADLVIAEVGF*SAPRKF
Trigger: GAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGC...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CAACTCAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCCGTGGTGTTTCAGCCTaGTGCCTGAGGATAGGAGGG +
Preference number: 4 (lower is better)
Translates to: QLKYGNCSESFRALVPECRGVSA*CLRIGG
Trigger: CCCTCCTATCCTCAGGCACCAGGCTGAAACACCACG...GCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAAGGAGAAGGTCCAACTaGGTCTGGCGGGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LTEHFWRAMASPTGKSARRRRSN*VWRAVL
Trigger: AAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCT...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GTGAGAGAAAACTTGAGCAAGAGAAGAGACAGGCGTGGCCTATTTCCACACGCAAGGAGAAGGTCCAACTaGGTCTGGCGGGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: VRENLSKRRDRRGLFPHARRRSN*VWRAVL
Trigger: AAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCT...TGCGTGTGGAAATAGGCCACGCCTGTCTCTTCTCTTGCTCAAGTTTTCTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CTCTCGGGGGTGACCCTGGAACTAGAACGACAGAAAAGACACTGTGACTTTGACCTGAGGCTTCTAAGCTaGGGTCCTGAGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LSGVTLELERQKRHCDFDLRLLS*GPEEKV
Trigger: GACCTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAG...GTCAAAGTCACAGTGTCTTTTCTGTCGTTCTAGTTCCAGGGTCACCCCCGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAGTCAATGTCAGCAGATaGGCAGGGAGAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTEVNVSR*AGRRGL
Trigger: CAGACCTCTTCTCCCTGCCCATCTGCTGACATTGAC...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp ACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTGAATTGTTCGATCTCTaGTCCCACCTGAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: TKPYLGTGSRPIQGRDDVELFDL*SHLSNK
Trigger: TTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTC...AACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGCACTCTCTTGGGAGCTaGAATCATGCCAACCTTCAA +
Preference number: 4 (lower is better)
Translates to: PAKDSQNHLSSNLEERQEHSLGS*NHANLQ
Trigger: TTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTG...CTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp GGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTTGGTTCATGGACTTTTaGCTCCTGGATGAGACACAC +
Preference number: 4 (lower is better)
Translates to: GLINFGPVFGTLAGPAMGWFMDF*LLDETH
Trigger: GTGTGTCTCATCCAGGAGCCAAAAGTCCATGAACCA...ACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000598240.1
CDS-3UTR CCA 90 bp CGGGGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGATTCGAACTGGTTCATaGACTTTTGGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: RGLINFGPVFGTLAGPAMIRTGS*TFGSWM
Trigger: CATCCAGGAGCCAAAAGTCCATGAACCAGTTCGAAT...CATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000598240.1
CDS-3UTR CCA 90 bp GTCGATGGTGCCCACTACCCTGTGATCTGCTCGCTGGGGGACAGCATCACTCAGATAGGCAATTCGAACTaGTTCATGGACTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VDGAHYPVICSLGDSITQIGNSN*FMDFWL
Trigger: GAGCCAAAAGTCCATGAACCAGTTCGAATTGCCTAT...CTGAGTGATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCACCATCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTGGGTTTCTTCTTTTTaGACATGGGACGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSWVSSF*TWDDPE
Trigger: CTCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCA...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCTGGGTTTCTTCTTTTTaGACATGGGACGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: LCRNTSNVSSLCSCPSAPWVSSF*TWDDPE
Trigger: CTCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCA...GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CCA 90 bp GTCGATGGTGCCCACTACCCTGTGATCTGCTCGCTGGGGGACAGCATCACTCAGCGAAGTCCAAGTCCTTaGGTTTCTTCTTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: VDGAHYPVICSLGDSITQRSPSP*VSSFWT
Trigger: TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCG...CTGAGTGATGCTGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCACCATCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTATCGGTCAGCTTCTGCTaGGCGAAGTCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVSVSFC*AKSKSL
Trigger: CAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGA...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGTCGGTCAGCTTCTGCTaGGCGAAGTCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: NRALLESNGQSNWKISQRSVSFC*AKSKSL
Trigger: CAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGA...CCTCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGAACATCAACTTTGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGTCGGTCAGCTTCTGCTaGGCGAAGTCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GTSTLLGEISLHTSTPARSVSFC*AKSKSL
Trigger: CAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGA...CCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACAAAGTTGATGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCTCGGTCAGCTTCTGCTaGGCGAAGTCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGSVSFC*AKSKSL
Trigger: CAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGA...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGACCGTACTTGGGCACTaGCTCCAGGCCGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: KGCNKTALDDAIRAKSAETVLGH*LQADPG
Trigger: CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGT...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGACACCAAACCGTACTTaGGCACTGGCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRTPNRT*ALAPGR
Trigger: TCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp ACAGGAGAGGTGTCCTCTGAGAGTGTAGGGGGCTTTCTAGGTTCAAGGAGATGTATCAGCCAGAGGAGCTaGTTCCTCAGCACTCACAGG +
Preference number: 4 (lower is better)
Translates to: TGEVSSESVGGFLGSRRCISQRS*FLSTHR
Trigger: CCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGAT...ACATCTCCTTGAACCTAGAAAGCCCCCTACACTCTCAGAGGACACCTCTCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp TCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGACTTCTGGAGAGCAATaGCCAGTCCAACTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SCTHQTVLGHWLQADPGQTSGEQ*PVQLEN
Trigger: ATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGT...CTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp ACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTACTTCTGGAGAGCAATaGCCAGTCCAACTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: TKPYLGTGSRPIQGRDDVTSGEQ*PVQLEN
Trigger: ATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGT...AACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGAGAAGAGACAGGCGTGGCCTATTTCCACACGCACATCCACGGAGGCTGGCCTACTTCTGGAGAGCAATaGCCAGTCCAACTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: REETGVAYFHTHIHGGWPTSGEQ*PVQLEN
Trigger: ATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGT...AGGCCAGCCTCCGTGGATGTGCGTGTGGAAATAGGCCACGCCTGTCTCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCCTGTTGTCCTCTCGGGGGTGACCCTGGAACTAGAACGACAGAAAAGACACTGCTAACAGAGCACTTCTaGAGAGCAATGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: ACCPLGGDPGTRTTEKTLLTEHF*RAMASP
Trigger: TGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG...CAGTGTCTTTTCTGTCGTTCTAGTTCCAGGGTCACCCCCGAGAGGACAACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTACTAACAGAGCACTTCTaGAGAGCAATGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLLTEHF*RAMASP
Trigger: TGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCTAACAGAGCACTTCTaGAGAGCAATGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGLTEHF*RAMASP
Trigger: TGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp ACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACTCGCCCAGGCTGGAGTaGAGTGGCATGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TALDDAIRAKSAESQRVYSPRLE*SGMISA
Trigger: AGCTGAGATCATGCCACTCCACTCCAGCCTGGGCGA...GTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp TCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAGAGCTGTGCACGACCTaGGCCCTTCTTTTTGGACAT +
Preference number: 4 (lower is better)
Translates to: SVGTHRMCLLCAPARQHPELCTT*ALLFGH
Trigger: ATGTCCAAAAAGAAGGGCCCAGGTCGTGCACAGCTC...TGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593795.5
CDS-3UTR CCA 90 bp CTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCTTGGAAAACAGTCAGTaGTTGCTGAATCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LCRNTSNVSSLCSCPSAPLENSQ*LLNRAG
Trigger: CCCTGCCCGATTCAGCAACCACTGACTGTTTTCCAA...GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTCACCCTCGAAGAGCTaGCTTTTGAGGGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PIQGRDDVLRAIAASRLISPSKS*LLRGCP
Trigger: TGGGCACCCCCTCAAAAGCCAGCTCTTCGAGGGTGA...GATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTCATCCTCTGTGGCAGTaGCTGTCACAGTCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: QVWQLFRELQSFGTRVQTHPLWQ*LSQSPF
Trigger: GAAGGGCGACTGTGACAGCCACTGCCACAGAGGATG...AGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR CAA 72 bp CTCTTGGGAGCTGGAATCATGCCAACCTTCAATGACTaGCTGCTGATCCTCTTCCGAGGGAAGCAGGTACCT +
Preference number: 4 (lower is better)
Translates to: LLGAGIMPTFND*LLILFRGKQVP
Trigger: AGGTACCTGCTTCCCTCGGAAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
3UTR CAA 72 bp GTCATAGGCAATTCGAACTGGTTCATGGACTGGGGCTaGGAAAACAGTCAGTGGTTGCTGAATCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VIGNSNWFMDWG*ENSQWLLNRAG
Trigger: CCCTGCCCGATTCAGCAACCACTGACTGTTTTCCAAGCCCCAGTCCATGAACCAGTTCGAATTGCCTATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR TCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTCCACTGGCATCCATGTaGTATCGTTTGGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIAPLASM*YRLAFS
Trigger: AGAAAAAGCCAAACGATATCACATGGATGCCAGTGG...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGCTACAGATCCACTaGGGGAGTATCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: VISSDGNKPETVKHPEWRELQIH*GSICHR
Trigger: GCGATGGCAGATACTCCCTCAGTGGATCTGTAGCTC...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp CTCTTGGGAGCTGGAATCATGCCAACCTTCAATGACTTGCTGCTGATCCTCTTCCCGGCATCTCTAGAGTaGGCTACAGATCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: LLGAGIMPTFNDLLLILFPASLE*ATDPLR
Trigger: CCTCAGTGGATCTGTAGCTCACTCTAGAGATGCCGG...GAAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp CCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTCCGGCATCTCTAGAGTaGGCTACAGATCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PPQRLQRRLFSCTHQTVLPASLE*ATDPLR
Trigger: CCTCAGTGGATCTGTAGCTCACTCTAGAGATGCCGG...AAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp ATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCAGTAGCTGTCATCACTaGTGGAAGGGTTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: IECVFFVLLPVSTQPFPFSSCHH*WKGCLI
Trigger: GATCAAGCAACCCTTCCATCAGTGATGACAGCTACT...GAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGGCAAATTTCCAGTCCTaGGAACGGAAATGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGANFQS*ERKCPN
Trigger: ATTGGGGCATTTCCGTTCTCAGGACTGGAAATTTGC...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGCAGGCCATGCGCATCTGCCCTTGGCCAGTGTGAGGTTTGCTCCTTCAGCAAAAAAACTATACTCCTGTaGCCAAGAGGACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: GRPCASALGQCEVCSFSKKTILL*PRGLLR
Trigger: TCTCAAGAGTCCTCTTGGTCACAGGAGTATAGTTTT...TTTGCTGAAGGAGCAAACCTCACACTGGCCAAGGGCAGATGCGCATGGCCTGCC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp TGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTATCACATTTCTCAATGTaGCAAGTTTCCCAACACCCC +
Preference number: 4 (lower is better)
Translates to: CWGKFLCIPARQRGQTALSHFSM*QVSQHP
Trigger: GGGGTGTTGGGAAACTTGTCACATTGAGAAATGTGA...TAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCCCCAGAGGGATCTTCTaGATGGGGAACTGGATATCT +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESPRGIF*MGNWIS
Trigger: AGATATCCAGTTCCCCATTCAGAAGATCCCTCTGGG...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGACCCAGAGGGATCTTCTaGATGGGGAACTGGATATCT +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSRPRGIF*MGNWIS
Trigger: AGATATCCAGTTCCCCATTCAGAAGATCCCTCTGGG...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp TGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCCAGAGGGATCTTCTaGATGGGGAACTGGATATCT +
Preference number: 4 (lower is better)
Translates to: CRNTSNVSSLCSCPSAPNPRGIF*MGNWIS
Trigger: AGATATCCAGTTCCCCATTCAGAAGATCCCTCTGGG...GTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAACCCAGAGGGATCTTCTaGATGGGGAACTGGATATCT +
Preference number: 4 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTEPRGIF*MGNWIS
Trigger: AGATATCCAGTTCCCCATTCAGAAGATCCCTCTGGG...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTATGGAAACGCAGCAGGTaGGGGAGCTATATCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVWKRSR*GSYILQ
Trigger: CTGCAAGATATAGCTCCCTCACCTGCTGCGTTTCCA...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGACTTGGAGCCTTGGCCTaGATTTCAGGTTTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSRLGALA*ISGFVG
Trigger: TCCTACGAAACCTGAAATTCAGGCCAAGGCTCCAAG...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp CCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACCTTGGAGCCTTGGCCTaGATTTCAGGTTTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: PQEEPASPYKGCNKTALDLGALA*ISGFVG
Trigger: TCCTACGAAACCTGAAATTCAGGCCAAGGCTCCAAG...GTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR TCA 90 bp CTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGAAGGAGTTTCTTCTTaGGGTTGCGGACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LIGQLLLGEVQVLGFLLFEGVSS*GCGQPG
Trigger: CCCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTC...AAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp GTCCGTTTGCTGGTCATGTTATGTGGTAGGTGGCTGTCATCTGTGAGAGAAAACTCTAAGCTGGGGTCCTaGGGAGAAGGTCCAACTGGG +
Preference number: 4 (lower is better)
Translates to: VRLLVMLCGRWLSSVRENSKLGS*GEGPTG
Trigger: CCCAGTTGGACCTTCTCCTCAGGACCCCAGCTTAGA...GTTTTCTCTCACAGATGACAGCCACCTACCACATAACATGACCAGCAAACGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCATCTCTGGTCCCACCTaGGCAACAAATCTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVISGPT*ATNLAS
Trigger: ACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGAT...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp CATGGGCACAAACAGTCCATGAGATGCAGGTGTTTGGGACACACACTGAGACATTCACCACCACCAGTGTaGAGGTTGTGCGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: HGHKQSMRCRCLGHTLRHSPPPV*RLCGDD
Trigger: GTCATCTCCGCACAACCTTCACACTGGTGGTGGTGA...ATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCATGGACTGTTTGTGCCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTCATGCCAACCTTCAATaGCTTGCTGCTGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPHANLQ*LAADPL
Trigger: AAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATG...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGCTAAGTGATTTCCAGTaGTGGAAACAAGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: NVSSLCSCPSAPNPSPSELSDFQ*WKQARD
Trigger: GTCTCTGGCTTGTTTCCATCACTGGAAATCACTTAG...CTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593795.5
ENST00000594773.5
CDS-3UTR TCA 90 bp CAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATAGGAGAGGTGTCCTCTaGGAGTGTAGGGGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: QRASELWYPSADLVITGNRRGVL*ECRGLS
Trigger: AGAAAGCCCCCTACACTCTCAGAGGACACCTCTCCT...ATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR TCA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGC +
Preference number: 4 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVDPGQG*CFKGNC
Trigger: GCAATTGCCCTTAAAACATCATCCCTGCCCTGGATC...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR TCA 90 bp TTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGC +
Preference number: 4 (lower is better)
Translates to: FGHGTTPRPVIGNSNWFMDPGQG*CFKGNC
Trigger: GCAATTGCCCTTAAAACATCATCCCTGCCCTGGATC...CATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR TCA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGATCCTTGGGTTTCGGCTaGGATGAGAAACGGGGCATC +
Preference number: 4 (lower is better)
Translates to: VISSDGNKPETVKHPEWRSLGFG*DEKRGI
Trigger: GATGCCCCGTTTCTCATCTCAGCCGAAACCCAAGGA...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593795.5
CDS-3UTR TCA 90 bp GGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTAAGCTCAGTATTAAATaGAATGCCTGCTGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: GWPGYGFPGMGKQFQTETKLSIK*NACWRL
Trigger: TAACCTCCAGCAGGCATTTCATTTAATACTGAGCTT...AGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp GTGAGAGAAAACTTGAGCAAGAGAAGAGACAGGCGTGGCCTATTTCCACACGCATGCCCTTGGCCAGTGTaGGGTTTGCTCCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: VRENLSKRRDRRGLFPHACPWPV*GLLLQQ
Trigger: TTGCTGAAGGAGCAAACCTCACACTGGCCAAGGGCA...TGCGTGTGGAAATAGGCCACGCCTGTCTCTTCTCTTGCTCAAGTTTTCTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGCTTATCTTTCACATCAGTGGTTTTGATCTATTCAGGAAGAGAACGATTTTGTCTGGCCTGGAGGCCTTaGGGGGCTCACAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GLSFTSVVLIYSGRERFCLAWRP*GAHSRG
Trigger: GCCCCGGCTGTGAGCCCCTCAAGGCCTCCAGGCCAG...ACAAAATCGTTCTCTTCCTGAATAGATCAAAACCACTGATGTGAAAGATAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCGAGGGAGCTATATCTTaGAGGCCGACAGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVEGAIS*RPTASK
Trigger: CTTAGAAGCTGTCGGCCTGCAAGATATAGCTCCCTC...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp CGGGGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGCATCCGCTGCATTTCTaGCAACTTCAGCTTGTAATA +
Preference number: 4 (lower is better)
Translates to: RGLINFGPVFGTLAGPAMHPLHF*QLQLVI
Trigger: TATTACAAGCTGAAGTTGGCAGAAATGCAGCGGATG...CATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATTCTCGCTCATCCGCTaGATTTCTGCCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSRFSLIR*ISANFS
Trigger: GCTGAAGTTGGCAGAAATGCAGCGGATGAGCGAGAA...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAACTCGTCTTCAAACTCTaGTTCCCCTTCCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTELVFKL*FPFHEV
Trigger: GACCTCATGGAAGGGGAAGCAGAGTTTGAAGACGAG...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp TTGACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGTGGGAGCTGGAATCATaGCAACCTTCAATGACTTGC +
Preference number: 4 (lower is better)
Translates to: LTPAKDSQNHLSSNLEERWELES*QPSMTC
Trigger: GCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCA...CCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR GCA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTTATCGGTCAGCTTCTaGTGGGCGAAGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SDGNKPETVKHPEWRESTLSVSF*WAKSKS
Trigger: GGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAA...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCTTATCGGTCAGCTTCTaGTGGGCGAAGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGLSVSF*WAKSKS
Trigger: GGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAA...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp TCTGCATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCTCTTCTTTGTGCTCCTaGCCGTCAGCACCCAACCCT +
Preference number: 4 (lower is better)
Translates to: SASSSVGTHRMCLLCAPASSLCS*PSAPNP
Trigger: AGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGA...GGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR GCA 90 bp CATGGGCACAAACAGTCCATGAGATGCAGGTGTTTGGGACACACACTGAGACATTCTTCTTTGTGCTCCTaGCCGTCAGCACCCAACCCT +
Preference number: 4 (lower is better)
Translates to: HGHKQSMRCRCLGHTLRHSSLCS*PSAPNP
Trigger: AGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGA...ATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCATGGACTGTTTGTGCCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR GCA 90 bp CCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTTCTTCTTTGTGCTCCTaGCCGTCAGCACCCAACCCT +
Preference number: 4 (lower is better)
Translates to: PPQRLQRRLFSCTHQTVLSSLCS*PSAPNP
Trigger: AGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGA...AAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAATGTGTCTTCTTTGTaGTCCTGCCCGTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: HHPLSEHIECVFFVLLPVNVSSL*SCPSAP
Trigger: GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATT...GACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR GCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCTGTTTTAAGGGCAATTaGTGCTTCAAGGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTCFKGN*CFKAYL
Trigger: AAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACA...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp TTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGCTCCGCCCCAGAGACTaGAGAGACGTTTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: FGHGTTPRPVIGNSNWFMLRPRD*RDVCFH
Trigger: ATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAG...CATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR GCA 90 bp TGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTCCCCCGTATAAAAGGCTTGAGCCACTGTaGCTGGCCCAAAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: WYPSADLVITGNLSPPYKRLEPL*LAQSQD
Trigger: ATCCTGGCTTTGGGCCAGGCACAGTGGCTCAAGCCT...TTTATACGGGGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp CAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTATGATCTCAGCTCACTaGAACCTCTGCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: QVWQLFRELQSFGTRVQTMISAH*NLCLPG
Trigger: ACCGGGGAGGCAGAGGTTGCAGTGAGCTGAGATCAT...AGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp ACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTGTAATTCGTCTGGCTaGCATGTTATTTTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: TPNRTWALAPGRSRAGMMCNSSG*HVILPY
Trigger: ATAGGGCAAAATAACATGGCAGCCAGACGAATTACA...CATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS-3UTR GCA 90 bp TTTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATAACAGGCTTCAGCTCTaGTGTACTGGTGGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: FWTWDDPEACHRQFELVHNRLQL*CTGGFS
Trigger: CGAGAACCCACCAGTACAGCAGAGCTGAAGCCTGTT...ATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR GCA 90 bp TTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGCTGGTTACCTCGGAATaGCTTACCCAGCAGGAACTA +
Preference number: 4 (lower is better)
Translates to: FGHGTTPRPVIGNSNWFMLVTSE*LTQQEL
Trigger: TAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAG...CATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp GGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATGATGCCCAGGGCCTGGCATaGCAGGAACTGGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: GKAVPDGNYTEIPLSFYDAQGLA*QELGMG
Trigger: GCCCATGCCCAGTTCCTGGCATGCCAGGCCCTGGGC...ATCATAAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR GCA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGAGTCGCCCTTCCACTTaGATGATGGCAAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRSRPST*MMARPS
Trigger: AGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACT...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTAGTCGCCCTTCCACTTaGATGATGGCAAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PPQRLQRRLFSCTHQTVLSRPST*MMARPS
Trigger: AGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACT...AAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTTTACAGCCTCACCACTaGCATCCATGTGATATCGTT +
Preference number: 4 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIALQPHH*HPCDIV
Trigger: AACGATATCACATGGATGCCAGTGGTGAGGCTGTAA...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGCATACATCTCTGCTCTaGATCTTGGGACTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: WRIEWSYTQQSAGESGERHTSLL*ILGLPL
Trigger: TAAGGGCAGTCCCAAGATCCAGAGCAGAGATGTATG...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp AGCATCTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGCATACATCTCTGCTCTaGATCTTGGGACTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: SIWKPRFLSVSFCWAKSKHTSLL*ILGLPL
Trigger: TAAGGGCAGTCCCAAGATCCAGAGCAGAGATGTATG...CTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACACACTGGTATCTGCCATCGCTGTaGACGTCATCATACATCTCT +
Preference number: 4 (lower is better)
Translates to: EISLHTSTPARADGLTHWYLPSL*TSSYIS
Trigger: AGAGATGTATGATGACGTCCACAGCGATGGCAGATA...CCAGTGTGTAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp ACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTTGCCCCAATTTCCGGTaGCCAATGACCTGGTCCCGA +
Preference number: 4 (lower is better)
Translates to: TAETFVFMYTPNRTWALACPNFR*PMTWSR
Trigger: TCGGGACCAGGTCATTGGCCACCGGAAATTGGGGCA...AGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTTTAGAGCTCGACCTCTaGCCTGGACTTGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: ESFRALVPECRLGNYREFLELDL*PGLDCR
Trigger: GCGGCAGTCAAGTCCAGGCCAGAGGTCGAGCTCTAA...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGAGGAGGGAACCTTCCTaGTCAACGATGTTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGRREPS*STMFRA
Trigger: AGCTCTAAACATCGTTGACCAGGAAGGTTCCCTCCT...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGCCAAGGAAAATGTCTGTCCCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTGGCAGAGAGAGTTGGTaGTTTCTAGGGCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GQGKCLSQKGQRLPAERVGRESW*FLGQEP
Trigger: TGGCTCTTGCCCTAGAAACCACCAACTCTCTCTGCC...AACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACATTTTCCTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp ACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACTCGGCTTTCTTAACCTaGAGGGGACATCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TALDDAIRAKSAESQRVYSAFLT*RGHPLL
Trigger: CAGCAGCGGATGTCCCCTCCAGGTTAAGAAAGCCGA...GTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTCTCGCATCGGCTCTaGTTCGGCTTTCTTAACCTG +
Preference number: 4 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVLSHRL*FGFLNL
Trigger: CAGGTTAAGAAAGCCGAACCAGAGCCGATGCGAGAG...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGACTACTTGGAGCCTTaGCCTGAATTTCAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPDYLEP*PEFQVS
Trigger: CGAAACCTGAAATTCAGGCCAAGGCTCCAAGTAGTC...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGGTGGGATCACTCAGACTACTTaGAGCCTTGGCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: QGLTEPSQLKLGGAAGGGITQTT*SLGLNF
Trigger: GAAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGAT...CCCACCTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp GACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAATCACTCAGACTACTTaGAGCCTTGGCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: DPCQGLTEPSQLKLGGAAITQTT*SLGLNF
Trigger: GAAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGAT...TGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp TTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCATCACTCAGACTACTTaGAGCCTTGGCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: FHVHTKPYLGTGSRPIQGITQTT*SLGLNF
Trigger: GAAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGAT...GCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCACAAGCTGGTCGATaGTGCCCACTACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: SDGNKPETVKHPEWRESTSQAGR*CPLPCD
Trigger: ATCACAGGGTAGTGGGCACCATCGACCAGCTTGTGA...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTATCACAAGCTGGTCGATaGTGCCCACTACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVSQAGR*CPLPCD
Trigger: ATCACAGGGTAGTGGGCACCATCGACCAGCTTGTGA...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCCCGTATAAATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACGCTGAGGTCGGCTTCTaGTCGGCTCCTCGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PRINSGEQRENTICDRFHAEVGF*SAPRKF
Trigger: GAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGC...GTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGTTTGCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCAGGGTCTGGGTCCCGGTaGTCGCTCTCCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SLLTLWILKRHVNLGPISGSGSR*SLSSPS
Trigger: GGAAGGCGAGGAGAGCGACCACCGGGACCCAGACCC...TGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCAGCATCATTTCTGTCTaGCAGGGATGGTTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSSIISV*QGWFCL
Trigger: CAGGCAAAACCATCCCTGCCAGACAGAAATGATGCT...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAGCATCATTTCTGTCTaGCAGGGATGGTTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LCRNTSNVSSLCSCPSAPSIISV*QGWFCL
Trigger: CAGGCAAAACCATCCCTGCCAGACAGAAATGATGCT...GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp TCTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTAGCATCATTTCTGTCTaGCAGGGATGGTTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SGSPGSYRSASAGRSPSPSIISV*QGWFCL
Trigger: CAGGCAAAACCATCCCTGCCAGACAGAAATGATGCT...AGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGCATCATTTCTGTCTaGCAGGGATGGTTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLSIISV*QGWFCL
Trigger: CAGGCAAAACCATCCCTGCCAGACAGAAATGATGCT...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CAACTCAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCCTGGCGGGCAGTCCTTaGCAGCATCATTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: QLKYGNCSESFRALVPECLAGSP*QHHFCL
Trigger: CAGACAGAAATGATGCTGCCAAGGACTGCCCGCCAG...GCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAGGAGAAGGTCCAACTaGGTCTGGCGGGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: PLLTKAVIRQHLTMPYVRRRRSN*VWRAVL
Trigger: AAGGACTGCCCGCCAGACCCAGTTGGACCTTCTCCT...TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCTGAGGCTTCTAAGCTaGGGTCCTGAGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRLRLLS*GPEEKV
Trigger: GACCTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAG...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGAATTGTTCGATCTCTaGTCCCACCTGAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: PCQGLTEPSQLKLGGAAGELFDL*SHLSNK
Trigger: TTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTC...TCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp GTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTAAAGCAGAACTATTTTaGTCATGTAGAAACCACAGG +
Preference number: 4 (lower is better)
Translates to: VFFVLLPVSTQPFPFRGGKAELF*SCRNHR
Trigger: CCTGTGGTTTCTACATGACCAAAATAGTTCTGCTTT...ACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR CCA 90 bp CGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTAACTTCTCCTGAGAACCCGTaGTGTCACCACCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: RAKSAESQRVYNPHPFVTSPENP*CHHHQC
Trigger: ACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGA...AGTTACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCATCTCCTGAGAACCCGTaGTGTCACCACCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: AETFVFMYTPNRTWALAPSPENP*CHHHQC
Trigger: ACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGA...TGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTTCTCCTGAGAACCCGTaGTGTCACCACCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: YGNCSESFRALVPECRLGSPENP*CHHHQC
Trigger: ACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGA...ACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTCACTCTCTTGGGAGCTaGAATCATGCCAACCTTCAA +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPHSLGS*NHANLQ
Trigger: TTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTG...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CCTTCCACTTGCATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTTTGCTGCACTCTCTTGGGAGCTaGAATCATGCCAACCTTCAA +
Preference number: 4 (lower is better)
Translates to: PSTCMMARPSGLGTVRLLHSLGS*NHANLQ
Trigger: TTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTG...CAGCAAACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCACTCTCTTGGGAGCTaGAATCATGCCAACCTTCAA +
Preference number: 4 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGHSLGS*NHANLQ
Trigger: TTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTG...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTTGGTTCATGGACTTTTaGCTCCTGGATGAGACACAC +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPWFMDF*LLDETH
Trigger: GTGTGTCTCATCCAGGAGCCAAAAGTCCATGAACCA...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGTGGTTCATGGACTTTTaGCTCCTGGATGAGACACAC +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSWFMDF*LLDETH
Trigger: GTGTGTCTCATCCAGGAGCCAAAAGTCCATGAACCA...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGATTCGAACTGGTTCATaGACTTTTGGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: PAKDSQNHLSSNLEERQEIRTGS*TFGSWM
Trigger: CATCCAGGAGCCAAAAGTCCATGAACCAGTTCGAAT...CTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp GGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACACACTGATTCGAACTGGTTCATaGACTTTTGGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: GNFSAYQHASEGRRPYTLIRTGS*TFGSWM
Trigger: CATCCAGGAGCCAAAAGTCCATGAACCAGTTCGAAT...CAGTGTGTAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCGACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGTCTTCTTTTTGGACATaGGACGACCCCGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: ATHSRNKEYSPSKSWLLRSSFWT*DDPEAC
Trigger: ACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGA...CCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGTCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCTGGGTTTCTTCTTTTTaGACATGGGACGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCWVSSF*TWDDPE
Trigger: CTCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCA...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTTCGGTCAGCTTCTGCTaGGCGAAGTCCAAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PPQRLQRRLFSCTHQTVLSVSFC*AKSKSL
Trigger: CAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGA...AAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCGTAAAGCACCCAGAGTaGCGAGAGAGCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HHPLSEHIECVFFVLLPVVKHPE*RESTSR
Trigger: TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC...GACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593795.5
ENST00000594773.5
CDS-3UTR CCA 90 bp GCCAGTCCAACTGGAAAATCAGCCAGAGGAGCTGGTTCCTCAGCACTCACAGGCCCCCCGTATAAATTCTaGCGAACAACGAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: ASPTGKSARGAGSSALTGPPYKF*RTTRKH
Trigger: GTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGGG...GCCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGATTTTCCAGTTGGACTGGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGAAGAGCTTCAGAGCTTTaGTACCCGAGTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSRRASEL*YPSADL
Trigger: CAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCT...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp TGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTCCCCCGTATAAATCGCCCAGGCTGGAGTaGAGTGGCATGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WYPSADLVITGNLSPPYKSPRLE*SGMISA
Trigger: AGCTGAGATCATGCCACTCCACTCCAGCCTGGGCGA...TTTATACGGGGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp TCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCACGAAGTCCAAGTCCTTaGGTTTCGGCTGAGATGAGA +
Preference number: 4 (lower is better)
Translates to: SVGTHRMCLLCAPARQHPRSPSP*VSAEMR
Trigger: TCTCATCTCAGCCGAAACCCAAGGACTTGGACTTCG...TGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593795.5
CDS-3UTR CCA 90 bp GCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTGGCAGGGGACTGCAATaGGACAAGAGACCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: ASELWYPSADLVITGNLSGRGLQ*DKRPVL
Trigger: CAGAACGGGTCTCTTGTCCCATTGCAGTCCCCTGCC...AGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp CCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAACTGGTTCATGGACTaGGGCTTGGAAAACAGTCAG +
Preference number: 4 (lower is better)
Translates to: PAMGSREWESSSRRKLHRNWFMD*GLENSQ
Trigger: CTGACTGTTTTCCAAGCCCCAGTCCATGAACCAGTT...TCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp CAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATATGGGTTCCCGGGAATaGGAAAGCAGTTCCAGACGG +
Preference number: 4 (lower is better)
Translates to: QRASELWYPSADLVITGNMGSRE*ESSSRR
Trigger: CCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT...ATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp CACTTAGCTTTTATGATGGTCACAAATGTGGCCAAAATGACCAGGGCCAACAAGCTGTGTTCGGGACCCTaGCTGGCCCGGCTATGGGTT +
Preference number: 4 (lower is better)
Translates to: HLAFMMVTNVAKMTRANKLCSGP*LARLWV
Trigger: AACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAG...CTTGTTGGCCCTGGTCATTTTGGCCACATTTGTGACCATCATAAAAGCTAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGCCAGGAACTGGGCATaGGCACAAACAGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: VISSDGNKPETVKHPEWRARNWA*AQTVHE
Trigger: CTCATGGACTGTTTGTGCCCATGCCCAGTTCCTGGC...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR CCA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAGACGGCCTTACACACTaGCCTGTGAACATACCTATT +
Preference number: 4 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLDGLTH*PVNIPI
Trigger: AATAGGTATGTTCACAGGCCAGTGTGTAAGGCCGTC...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TGCCTTTCGGGGGCAGCGCCACCTTCTGAAGGGGAACCAAGACAGATTTGGAGGATGTTATGTGGTAGGTaGCTGTCATCTGTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: CLSGAAPPSEGEPRQIWRMLCGR*LSSVRE
Trigger: TTCTCTCACAGATGACAGCCACCTACCACATAACAT...CCTCCAAATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCCCCCGAAAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGGACTGGAAAACTATACTCCTGTaGCCAAGAGGACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: HGTTPRPVIGNSNWFMDWKTILL*PRGLLR
Trigger: TCTCAAGAGTCCTCTTGGTCACAGGAGTATAGTTTT...CCAGTCCATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR TCA 90 bp TGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTAAAAACTATACTCCTGTaGCCAAGAGGACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: CWGKFLCIPARQRGQTALKTILL*PRGLLR
Trigger: TCTCAAGAGTCCTCTTGGTCACAGGAGTATAGTTTT...TAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTTCACATTTCTCAATGTaGCAAGTTTCCCAACACCCC +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPSHFSM*QVSQHP
Trigger: GGGGTGTTGGGAAACTTGTCACATTGAGAAATGTGA...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTATTTGGTTAGTGCCCTaGGTTTTGGGAGTAATACGA +
Preference number: 4 (lower is better)
Translates to: GLINFGPVFGTLAGPAMGIWLVP*VLGVIR
Trigger: TCGTATTACTCCCAAAACTCAGGGCACTAACCAAAT...ACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGCATCAGACTTATCTATaGTGTCAAAGCTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLHQTYL*CQSSSF
Trigger: GAAAGATGAGCTTTGACATCATAGATAAGTCTGATG...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GGCAGGCCATGCGCATCTGCCCTTGGCCAGTGTGAGGTTTGCTCCTTCAGCAAAGGAATCCTGCCCATTTaGTTATTTCTATCCCAAATC +
Preference number: 4 (lower is better)
Translates to: GRPCASALGQCEVCSFSKGILPI*LFLSQI
Trigger: GATTTGGGATAGAAATAATCAAATGGGCAGGATTCC...TTTGCTGAAGGAGCAAACCTCACACTGGCCAAGGGCAGATGCGCATGGCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGATGGAAACGCAGCAGGTaGGGGAGCTATATCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VISSDGNKPETVKHPEWRWKRSR*GSYILQ
Trigger: CTGCAAGATATAGCTCCCTCACCTGCTGCGTTTCCA...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GCAGGCCATAAGCAAAGGTGTGACACTCTTCAGAAGCCGGTCTTGAAGTCTCATTGGAAACGCAGCAGGTaGGGGAGCTATATCTTGCAG +
Preference number: 4 (lower is better)
Translates to: AGHKQRCDTLQKPVLKSHWKRSR*GSYILQ
Trigger: CTGCAAGATATAGCTCCCTCACCTGCTGCGTTTCCA...ATGAGACTTCAAGACCGGCTTCTGAAGAGTGTCACACCTTTGCTTATGGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR TCA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGTGGAAACGCAGCAGGTaGGGGAGCTATATCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRWKRSR*GSYILQ
Trigger: CTGCAAGATATAGCTCCCTCACCTGCTGCGTTTCCA...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCACAGGCTGCCTTCGATaGCACGTTTCACAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PIQGRDDVLRAIAASRLITGCLR*HVSQAG
Trigger: ACCAGCTTGTGAAACGTGTCATCGAAGGCAGCCTGT...GATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTCAGGGAGAAGAGGTCTaGGGTGCTTCAGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: ESFRALVPECRLGNYREFQGEEV*GASEMS
Trigger: GGACATCTCTGAAGCACCTCAGACCTCTTCTCCCTG...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGATCTCTGGTCCCACCTaGGCAACAAATCTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: NRALLESNGQSNWKISQRISGPT*ATNLAS
Trigger: ACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGAT...CCTCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTTGCTGTTTTCTATGCTaGATTGTTCGATCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GLINFGPVFGTLAGPAMGCCFLC*IVRSLV
Trigger: GACCAGAGATCGAACAATTCAGCATAGAAAACAGCA...ACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp GCCAGTCCAACTGGAAAATCAGCCAGAGGAGCTGGTTCCTCAGCACTCACAGGCTGCTGTTTTCTATGCTaGATTGTTCGATCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: ASPTGKSARGAGSSALTGCCFLC*IVRSLV
Trigger: GACCAGAGATCGAACAATTCAGCATAGAAAACAGCA...GCCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGATTTTCCAGTTGGACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGTGTGCGGAGATGACGTaGAACAAATTGATGGACATA +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRCAEMT*NKLMDI
Trigger: TATGTCCATCAATTTGTTTCACGTCATCTCCGCACA...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTTCACCACCACCAGTGTaGAGGTTGTGCGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: ASELWYPSADLVITGNLSSPPPV*RLCGDD
Trigger: GTCATCTCCGCACAACCTTCACACTGGTGGTGGTGA...AGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp TTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGCATGCCAACCTTCAATaGCTTGCTGCTGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: FGHGTTPRPVIGNSNWFMHANLQ*LAADPL
Trigger: AAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATG...CATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597280.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGACTTTTGGCTCCTGGATaGGACACACTCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: VISSDGNKPETVKHPEWRLLAPG*DTLSWE
Trigger: CTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAG...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp ATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCCTTTTGGCTCCTGGATaGGACACACTCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: MGSREWESSSRRKLHRNTLLAPG*DTLSWE
Trigger: CTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAG...GGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGGGCAGCGCCACCTTCTaGAGGGGAACCAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: KGCNKTALDDAIRAKSAEGSATF*RGTKTD
Trigger: ATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCC...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp TGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTAAGAAAACACCATCTGTaGTCGTTTCCACATCACGTT +
Preference number: 4 (lower is better)
Translates to: CWGKFLCIPARQRGQTALRKHHL*SFPHHV
Trigger: AACGTGATGTGGAAACGATCACAGATGGTGTTTTCT...TAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GTGGTTTTGATCTATTTGTTGGCCCGCTTGTGTCTGTACATCTGCATCATCCTCGCTCAGTTCTGTGGCTaGTGCCCTAGCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: VVLIYLLARLCLYICIILAQFCG*CPSHCC
Trigger: ACAGCAGTGGCTAGGGCATCAGCCACAGAACTGAGC...GAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGATCAAAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR TCA 90 bp GCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTCTGGTCTCAAACTCCTaGCCTCAGGTGATCCATCCG +
Preference number: 4 (lower is better)
Translates to: ASELWYPSADLVITGNLSLVSNS*PQVIHP
Trigger: CGGATGGATCACCTGAGGTCAGGAGTTTGAGACCAG...AGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR TCA 90 bp GGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATGATTGCAGGTGGAAGGACTaGGGCCCCACCCACTCCCAC +
Preference number: 4 (lower is better)
Translates to: GKAVPDGNYTEIPLSFYDCRWKD*GPTHSH
Trigger: GTGGGAGTGGGTGGGGCCTCAGTCCTTCCACCTGCA...ATCATAAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp AAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCCAAATGTGGCCAAAATaGCCAGGGCCAACAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KPPPQRLQRRLFSCTHQTQMWPK*PGPTSW
Trigger: CCAGCTTGTTGGCCCTGGTCATTTTGGCCACATTTG...GGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR TCA 90 bp CCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAGCCTGCTGGAGGTTATaGTCGGGGTTTAATAAACTT +
Preference number: 4 (lower is better)
Translates to: PAMGSREWESSSRRKLHRACWRL*SGFNKL
Trigger: AAGTTTATTAAACCCCGATCATAACCTCCAGCAGGC...TCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp CTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCGTTTGGGACACACACTaGGACATCAAAGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LCRNTSNVSSLCSCPSAPVWDTH*DIKERE
Trigger: TTCCCTTTCTTTGATGTCTCAGTGTGTGTCCCAAAC...GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR TCA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGTTACACACTGGCCTGTaGACATACCTATTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGLHTGL*TYLFVG
Trigger: GCCAACAAATAGGTATGTTCACAGGCCAGTGTGTAA...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCTATGGTGTGGAATCCTaGCCATTTGATTATTTCTAT +
Preference number: 4 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTYGVES*PFDYFY
Trigger: ATAGAAATAATCAAATGGGCAGGATTCCACACCATA...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp CCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGATCTAAGATTTTCTCCTaGCGGAAAGAAGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PAMGSREWESSSRRKLHRSKIFS*RKEEAK
Trigger: CTTGGCCTCTTCTTTCCGGCAGGAGAAAATCTTAGA...TCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGCATCCGCTGCATTTCTaGCAACTTCAGCTTGTAATA +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRHPLHF*QLQLVI
Trigger: TATTACAAGCTGAAGTTGGCAGAAATGCAGCGGATG...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp GAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACACACTGGCATCCGCTGCATTTCTaGCAACTTCAGCTTGTAATA +
Preference number: 4 (lower is better)
Translates to: EISLHTSTPARADGLTHWHPLHF*QLQLVI
Trigger: TATTACAAGCTGAAGTTGGCAGAAATGCAGCGGATG...CCAGTGTGTAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp ACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGGGGTTCTCGCTCATCCGCTaGATTTCTGCCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: THSRNKEYSPSKSWLLRGFSLIR*ISANFS
Trigger: GCTGAAGTTGGCAGAAATGCAGCGGATGAGCGAGAA...CCCCCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp CACTTAGCTTTTATGATGGTCACAAATGTGGCCAAAATGACCAGGGCCAACAAGAGAGATGTCCACTCCTaGTGGCTTGGGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: HLAFMMVTNVAKMTRANKRDVHS*WLGGWA
Trigger: GGCCCATCCCCCAAGCCAGCAGGAGTGGACATCTCT...CTTGTTGGCCCTGGTCATTTTGGCCACATTTGTGACCATCATAAAAGCTAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGAGATGTCCACTCCTaGTGGCTTGGGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKRDVHS*WLGGWA
Trigger: GGCCCATCCCCCAAGCCAGCAGGAGTGGACATCTCT...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp TTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGTGGGAGCTGGAATCATaGCAACCTTCAATGACTTGC +
Preference number: 4 (lower is better)
Translates to: FGHGTTPRPVIGNSNWFMWELES*QPSMTC
Trigger: GCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCA...CATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597280.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp CAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTATCGGTCAGCTTCTaGTGGGCGAAGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: QRASELWYPSADLVITGNLSVSF*WAKSKS
Trigger: GGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAA...ATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAAATGTGTCTTCTTTGTaGTCCTGCCCGTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: AETFVFMYTPNRTWALAPNVSSL*SCPSAP
Trigger: GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATT...TGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGGCTCCGCCCCAGAGACTaGAGAGACGTTTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: QLLLGEVQVLGFLLFGHGLRPRD*RDVCFH
Trigger: ATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAG...CCCATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR GCA 90 bp TTGACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCATACGTGCGAAAAGTaGAGAGTCTCAGAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: LTPAKDSQNHLSSNLEERHTCEK*RVSEGL
Trigger: TAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG...CCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTTTACACGCAGCAGAGTaGTGGGGAATCTGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: ESFRALVPECRLGNYREFLHAAE*WGIWRA
Trigger: CGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAA...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp GCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTTTACACGCAGCAGAGTaGTGGGGAATCTGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: ASELWYPSADLVITGNLSLHAAE*WGIWRA
Trigger: CGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAA...AGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp GCCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACATGCTGGCACCTCTACTaGCATAAAGATCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: ASETSAPETAETFVFMYTCWHLY*HKDLPV
Trigger: AACTGGCAGATCTTTATGGCAGTAGAGGTGCCAGCA...TGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp CCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAAACAGTCCATGAGATaGAGGTGTTTGGGACACACA +
Preference number: 4 (lower is better)
Translates to: PAMGSREWESSSRRKLHRKQSMR*RCLGHT
Trigger: TGTGTGTCCCAAACACCTGCATCTCATGGACTGTTT...TCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR GCA 90 bp GGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTTGTAATTCGTCTGGCTaGCATGTTATTTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GLINFGPVFGTLAGPAMGCNSSG*HVILPL
Trigger: CAAGGGCAAAATAACATGGCAGCCAGACGAATTACA...ACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR GCA 90 bp CGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTAACTGGCCAGTGTGAGGTTTaGTCCTTCAGCAAACCTGGA +
Preference number: 4 (lower is better)
Translates to: RAKSAESQRVYNPHPFVTGQCEV*SFSKPG
Trigger: TCCAGGTTTGCTGAAGGAGCAAACCTCACACTGGCC...AGTTACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTTACAGCCTCACCACTaGCATCCATGTGATATCGTT +
Preference number: 4 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSLQPHH*HPCDIV
Trigger: AACGATATCACATGGATGCCAGTGGTGAGGCTGTAA...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTTATCTGCCATCGCTGTaGACGTCATCATACATCTCT +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPYLPSL*TSSYIS
Trigger: AGAGATGTATGATGACGTCCACAGCGATGGCAGATA...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGTATCTGCCATCGCTGTaGACGTCATCATACATCTCT +
Preference number: 4 (lower is better)
Translates to: WRIEWSYTQQSAGESGERYLPSL*TSSYIS
Trigger: AGAGATGTATGATGACGTCCACAGCGATGGCAGATA...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTTTCTCAATCAGCCTaGAAGATCCAAAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVLSQSA*KIQSPP
Trigger: TGGGGGACTTTGGATCTTCCAGGCTGATTGAGAAAG...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCAGGAGGGAACCTTCCTaGTCAACGATGTTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVRREPS*STMFRA
Trigger: AGCTCTAAACATCGTTGACCAGGAAGGTTCCCTCCT...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGTCACATCAGGACTTaGAGTGTTTTTCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRGHIRT*SVFLDL
Trigger: CAAATCCAGAAAAACACTCCAAGTCCTGATGTGACC...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GGAACAGTCCGTTTGCTGGTCATGTTATGTGGTAGGTGGCTGTCATCTGTGAGAGATATCTTCTGTCCCTaGGTTTGTCCCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: GTVRLLVMLCGRWLSSVRDIFCP*VCPQGH
Trigger: GTGACCCTGGGGACAAACCCAGGGACAGAAGATATC...TCTCACAGATGACAGCCACCTACCACATAACATGACCAGCAAACGGACTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCGGCAGAGAGAGTTGGTaGTTTCTAGGGCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: PIQGRDDVLRAIAASRLIGRESW*FLGQEP
Trigger: TGGCTCTTGCCCTAGAAACCACCAACTCTCTCTGCC...GATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCAGGCCATAAGCAAAGGTGTGACACTCTTCAGAAGCCGGTCTTGAAGTCTCATTCCGGCAGAGAGAGTTaGTGGTTTCTAGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: AGHKQRCDTLQKPVLKSHSGRES*WFLGQE
Trigger: CTCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGA...ATGAGACTTCAAGACCGGCTTCTGAAGAGTGTCACACCTTTGCTTATGGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp TATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTTCCGGCAGAGAGAGTTaGTGGTTTCTAGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: YGNCSESFRALVPECRLGSGRES*WFLGQE
Trigger: CTCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGA...ACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp ATGTCTGTCCCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTGGTGGTTTCTACTCTCGCATCGGCTCTaGTTCGGCTTTCTTAACCTG +
Preference number: 4 (lower is better)
Translates to: MSVPKGPKTSGRESWWFLLSHRL*FGFLNL
Trigger: CAGGTTAAGAAAGCCGAACCAGAGCCGATGCGAGAG...TAGAAACCACCAACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp CCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCCTCTCGCATCGGCTCTaGTTCGGCTTTCTTAACCTG +
Preference number: 4 (lower is better)
Translates to: PIQGRDDVLRAIAASRLILSHRL*FGFLNL
Trigger: CAGGTTAAGAAAGCCGAACCAGAGCCGATGCGAGAG...GATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCGACTACTTGGAGCCTTaGCCTGAATTTCAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCDYLEP*PEFQVS
Trigger: CGAAACCTGAAATTCAGGCCAAGGCTCCAAGTAGTC...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp ATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCATCACTCAGACTACTTaGAGCCTTGGCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: IECVFFVLLPVSTQPFPFITQTT*SLGLNF
Trigger: GAAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGAT...GAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTTCACAAGCTGGTCGATaGTGCCCACTACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCSQAGR*CPLPCD
Trigger: ATCACAGGGTAGTGGGCACCATCGACCAGCTTGTGA...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAACACGTTTCACAAGCTaGTCGATGGTGCCCACTACC +
Preference number: 4 (lower is better)
Translates to: LTEHFWRAMASPTGKSARTRFTS*SMVPTT
Trigger: GGTAGTGGGCACCATCGACCAGCTTGTGAAACGTGT...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTGCTGAGGTCGGCTTCTaGTCGGCTCCTCGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GNGKAVPDGNYTEIPLSFAEVGF*SAPRKF
Trigger: GAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGC...AAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGCGTGGTGTTTCAGCCTaGTGCCTGAGGATAGGAGGG +
Preference number: 4 (lower is better)
Translates to: KGCNKTALDDAIRAKSAERGVSA*CLRIGG
Trigger: CCCTCCTATCCTCAGGCACCAGGCTGAAACACCACG...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCAGCATCATTTCTGTCTaGCAGGGATGGTTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCSIISV*QGWFCL
Trigger: CAGGCAAAACCATCCCTGCCAGACAGAAATGATGCT...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACAGCATCATTTCTGTCTaGCAGGGATGGTTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: CRNTSNVSSLCSCPSAPNSIISV*QGWFCL
Trigger: CAGGCAAAACCATCCCTGCCAGACAGAAATGATGCT...GTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGGTCAATGTCAGCAGATaGGCAGGGAGAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRVNVSR*AGRRGL
Trigger: CAGACCTCTTCTCCCTGCCCATCTGCTGACATTGAC...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp ACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACGTCAATGTCAGCAGATaGGCAGGGAGAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TALDDAIRAKSAESQRVYVNVSR*AGRRGL
Trigger: CAGACCTCTTCTCCCTGCCCATCTGCTGACATTGAC...GTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACACTCTCTTGGGAGCTaGAATCATGCCAACCTTCAA +
Preference number: 4 (lower is better)
Translates to: ASETSAPETAETFVFMYTHSLGS*NHANLQ
Trigger: TTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTG...TGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCTGGTTCATGGACTTTTaGCTCCTGGATGAGACACAC +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESWFMDF*LLDETH
Trigger: GTGTGTCTCATCCAGGAGCCAAAAGTCCATGAACCA...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTATTCGAACTGGTTCATaGACTTTTGGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPIRTGS*TFGSWM
Trigger: CATCCAGGAGCCAAAAGTCCATGAACCAGTTCGAAT...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAATTCGAACTGGTTCATaGACTTTTGGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLIRTGS*TFGSWM
Trigger: CATCCAGGAGCCAAAAGTCCATGAACCAGTTCGAAT...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTATAGGCAATTCGAACTaGTTCATGGACTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIAIGNSN*FMDFWL
Trigger: GAGCCAAAAGTCCATGAACCAGTTCGAATTGCCTAT...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGAACAGTCCGTTTGCTGGTCATGTTATGTGGTAGGTGGCTGTCATCTGTGAGATCTTCTTTTTGGACATaGGACGACCCCGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GTVRLLVMLCGRWLSSVRSSFWT*DDPEAC
Trigger: ACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGA...TCTCACAGATGACAGCCACCTACCACATAACATGACCAGCAAACGGACTGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGTGGGTTTCTTCTTTTTaGACATGGGACGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: NRALLESNGQSNWKISQRWVSSF*TWDDPE
Trigger: CTCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCA...CCTCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTCGAAGTCCAAGTCCTTaGGTTTCTTCTTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIARSPSP*VSSFWT
Trigger: TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCG...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GAGACATGTAAATCTGGGGCCGATTTCATCTGTTTAATGATTACTCCCCACCCGACACCAAACCGTACTTaGGCACTGGCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: ETCKSGADFICLMITPHPTPNRT*ALAPGR
Trigger: TCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT...CGGGTGGGGAGTAATCATTAAACAGATGAAATCGGCCCCAGATTTACATGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGTACAGCCAATACAAGTaGCATTTCCCGCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: WRIEWSYTQQSAGESGERYSQYK*HFPLSS
Trigger: AGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTA...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTAGGCAGACAAGGAGCTaGGACCACAGCCTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ATVQRASELWYPSADLVIRQTRS*DHSLGS
Trigger: ACTTCCTAGGCTGTGGTCCCAGCTCCTTGTCTGCCT...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp CCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGCTCCATCCTCCATGCTaGCACCTCTACTGCCATAAA +
Preference number: 4 (lower is better)
Translates to: PYVRKVQSLRGFTTPIPLLHPPC*HLYCHK
Trigger: TTTATGGCAGTAGAGGTGCCAGCATGGAGGATGGAG...CAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTCTAGGACAAAGCACATaGAATGGTCAGGGCGATGCT +
Preference number: 4 (lower is better)
Translates to: SDGNKPETVKHPEWRESTLGQST*NGQGDA
Trigger: AGCATCGCCCTGACCATTCCATGTGCTTTGTCCTAG...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp GTGGTTTTGATCTATTTGTTGGCCCGCTTGTGTCTGTACATCTGCATCATCCTCGGAACAAACCGTACTTaGGCACTGGCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: VVLIYLLARLCLYICIILGTNRT*ALAPGR
Trigger: TCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGTTCC...GAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGATCAAAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593795.5
CDS-3UTR CCA 90 bp GTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGGTTCTCGCCTCTTTTaGCTCCTGGATGAGACACAC +
Preference number: 4 (lower is better)
Translates to: VSFCWAKSKSLGFFFLDMGSRLF*LLDETH
Trigger: GTGTGTCTCATCCAGGAGCCAAAAGAGGCGAGAACC...CATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CCA 90 bp GCGACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGTTGGAAAACAGTCAGTaGTTGCTGAATCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ATHSRNKEYSPSKSWLLRLENSQ*LLNRAG
Trigger: CCCTGCCCGATTCAGCAACCACTGACTGTTTTCCAA...CCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp CCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAATTCGAACTGGTTCATaGACTGGGGCTTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: PAMGSREWESSSRRKLHRIRTGS*TGAWKT
Trigger: TGTTTTCCAAGCCCCAGTCCATGAACCAGTTCGAAT...TCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp TGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACATAGGCAATTCGAACTaGTTCATGGACTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: CRNTSNVSSLCSCPSAPNIGNSN*FMDWGL
Trigger: CAAGCCCCAGTCCATGAACCAGTTCGAATTGCCTAT...GTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CCA 90 bp TCCATGAGATGCAGGTGTTTGGGACACACACTGAGACATCAAAGAAAGGGAAAATGGCTGGCCCGGCTATaGGTTCCCGGGAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: SMRCRCLGHTLRHQRKGKWLARL*VPGNGK
Trigger: TTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCA...TTTTCCCTTTCTTTGATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTGCCAGGAACTGGGCATaGGCACAAACAGTCCATGAG +
Preference number: 4 (lower is better)
Translates to: ATVQRASELWYPSADLVIARNWA*AQTVHE
Trigger: CTCATGGACTGTTTGTGCCCATGCCCAGTTCCTGGC...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATGTTATTTTGCCCTTaGTTCGCGGTCGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTEMLFCP*FAVVLG
Trigger: ACCAAGGACGACCGCGAACCAAGGGCAAAATAACAT...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR CCA 90 bp TTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAACATACCTATTTGTTaGCCCGCTTGTGTCTGTACA +
Preference number: 4 (lower is better)
Translates to: FHVHTKPYLGTGSRPIQGNIPIC*PACVCT
Trigger: TGTACAGACACAAGCGGGCCAACAAATAGGTATGTT...GCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCTTCCACTTGCATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTTTGCTGGAACAGTCCGTTTGCTaGTCATGTTATGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: PSTCMMARPSGLGTVRLLEQSVC*SCYVVG
Trigger: ACCTACCACATAACATGACCAGCAAACGGACTGTTC...CAGCAAACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGAACAGTCCGTTTGCTGGTCATGTTATGTGGTAGGTGGCTGTCATCTGTGAGAGATGGCAAGGCCCTCTaGACTAGGAACAGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: GTVRLLVMLCGRWLSSVRDGKAL*TRNSPF
Trigger: AAACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATC...TCTCACAGATGACAGCCACCTACCACATAACATGACCAGCAAACGGACTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR CAA 72 bp ATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTTaGCTGGTCATGTTATGTGGTAGGTGGCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: MMARPSGLGTVR*LVMLCGRWLSS
Trigger: AGATGACAGCCACCTACCACATAACATGACCAGCAAACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGGAGCTACAGATCCACTaGGGGAGTATCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: KGCNKTALDDAIRAKSAEELQIH*GSICHR
Trigger: GCGATGGCAGATACTCCCTCAGTGGATCTGTAGCTC...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGGAGTAGCTGTCATCACTaGTGGAAGGGTTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: QLLLGEVQVLGFLLFGHGSSCHH*WKGCLI
Trigger: GATCAAGCAACCCTTCCATCAGTGATGACAGCTACT...CCCATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp CGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACAGCAAATTTCCAGTCCTaGGAACGGAAATGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: RSASAGRSPSPWVSSFWTANFQS*ERKCPN
Trigger: ATTGGGGCATTTCCGTTCTCAGGACTGGAAATTTGC...TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGAAAACTATACTCCTGTaGCCAAGAGGACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGKTILL*PRGLLR
Trigger: TCTCAAGAGTCCTCTTGGTCACAGGAGTATAGTTTT...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCTCACATTTCTCAATGTaGCAAGTTTCCCAACACCCC +
Preference number: 4 (lower is better)
Translates to: RCHTCEKCRVSEGLQPPSSHFSM*QVSQHP
Trigger: GGGGTGTTGGGAAACTTGTCACATTGAGAAATGTGA...GGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp TCTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTATTTGGTTAGTGCCCTaGGTTTTGGGAGTAATACGA +
Preference number: 4 (lower is better)
Translates to: SGSPGSYRSASAGRSPSPIWLVP*VLGVIR
Trigger: TCGTATTACTCCCAAAACTCAGGGCACTAACCAAAT...AGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR TCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGAATCCTGCCCATTTaGTTATTTCTATCCCAAATC +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRGILPI*LFLSQI
Trigger: GATTTGGGATAGAAATAATCAAATGGGCAGGATTCC...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGGAATCCTGCCCATTTaGTTATTTCTATCCCAAATC +
Preference number: 4 (lower is better)
Translates to: GTGSRPIQGRDDVLRAIAGILPI*LFLSQI
Trigger: GATTTGGGATAGAAATAATCAAATGGGCAGGATTCC...AGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGATTCAGAAGCCGGTCTTaGAGTCTCATTATGTACTTG +
Preference number: 4 (lower is better)
Translates to: PAMGSREWESSSRRKLHRFRSRS*SLIMYL
Trigger: CAAGTACATAATGAGACTTCAAGACCGGCTTCTGAA...TCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTATTCAGAAGCCGGTCTTaGAGTCTCATTATGTACTTG +
Preference number: 4 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLFRSRS*SLIMYL
Trigger: CAAGTACATAATGAGACTTCAAGACCGGCTTCTGAA...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AGTTTGCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCAGTGCCCACTACCCTGTaGTCTGCTCGCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: SLLTLWILKRHVNLGPISVPTTL*SARWGT
Trigger: TGTCCCCCAGCGAGCAGATCACAGGGTAGTGGGCAC...TGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp TGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTCCCCCGTATAAAACAGGCTGCCTTCGATaGCACGTTTCACAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: WYPSADLVITGNLSPPYKTGCLR*HVSQAG
Trigger: ACCAGCTTGTGAAACGTGTCATCGAAGGCAGCCTGT...TTTATACGGGGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTTGCTGTTTTCTATGCTaGATTGTTCGATCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LEAQVLIGQLLLGEVQVLCCFLC*IVRSLV
Trigger: GACCAGAGATCGAACAATTCAGCATAGAAAACAGCA...AAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGTGCTGTTTTCTATGCTaGATTGTTCGATCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: WRIEWSYTQQSAGESGERCCFLC*IVRSLV
Trigger: GACCAGAGATCGAACAATTCAGCATAGAAAACAGCA...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR TCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGTGTGCGGAGATGACGTaGAACAAATTGATGGACATA +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSCAEMT*NKLMDI
Trigger: TATGTCCATCAATTTGTTTCACGTCATCTCCGCACA...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp CGCCTCTTTTGGCTCCTGGATGAGACACACTCTCTTGGGAGCTGGAATCATGCCTGTGCGGAGATGACGTaGAACAAATTGATGGACATA +
Preference number: 4 (lower is better)
Translates to: RLFWLLDETHSLGSWNHACAEMT*NKLMDI
Trigger: TATGTCCATCAATTTGTTTCACGTCATCTCCGCACA...GGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGAGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR TCA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGTGTGCGGAGATGACGTaGAACAAATTGATGGACATA +
Preference number: 4 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGCAEMT*NKLMDI
Trigger: TATGTCCATCAATTTGTTTCACGTCATCTCCGCACA...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACATGCCAACCTTCAATaGCTTGCTGCTGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVHANLQ*LAADPL
Trigger: AAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATG...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp ATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACATGCCAACCTTCAATaGCTTGCTGCTGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: ILCRNTSNVSSLCSCPSAHANLQ*LAADPL
Trigger: AAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATG...TGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR TCA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTAAGTGATTTCCAGTaGTGGAAACAAGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVLSDFQ*WKQARD
Trigger: GTCTCTGGCTTGTTTCCATCACTGGAAATCACTTAG...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR TCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCCTAAGTGATTTCCAGTaGTGGAAACAAGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESLSDFQ*WKQARD
Trigger: GTCTCTGGCTTGTTTCCATCACTGGAAATCACTTAG...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR TCA 90 bp GCCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACATCACATCAGTGGTTTTaGTCTATTTGTTGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: ASETSAPETAETFVFMYTSHQWF*SICWPA
Trigger: AGCGGGCCAACAAATAGATCAAAACCACTGATGTGA...TGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
CDS-3UTR TCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCTCACATCAGTGGTTTTaGTCTATTTGTTGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESSHQWF*SICWPA
Trigger: AGCGGGCCAACAAATAGATCAAAACCACTGATGTGA...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR TCA 90 bp CGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTAACTGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGC +
Preference number: 4 (lower is better)
Translates to: RAKSAESQRVYNPHPFVTDPGQG*CFKGNC
Trigger: GCAATTGCCCTTAAAACATCATCCCTGCCCTGGATC...AGTTACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGAAAACACCATCTGTaGTCGTTTCCACATCACGTT +
Preference number: 4 (lower is better)
Translates to: GSRPIQGRDDVLRAIAASRKHHL*SFPHHV
Trigger: AACGTGATGTGGAAACGATCACAGATGGTGTTTTCT...TGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CCTTCCACTTGCATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTTTGCTGAGAAAACACCATCTGTaGTCGTTTCCACATCACGTT +
Preference number: 4 (lower is better)
Translates to: PSTCMMARPSGLGTVRLLRKHHL*SFPHHV
Trigger: AACGTGATGTGGAAACGATCACAGATGGTGTTTTCT...CAGCAAACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp TGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTAGATGCATTGATGAGATaGGACACCATGAATAACACA +
Preference number: 4 (lower is better)
Translates to: CWGKFLCIPARQRGQTALDALMR*DTMNNT
Trigger: TGTGTTATTCATGGTGTCTCATCTCATCAATGCATC...TAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGATCAGCTTCTCATCTaGAGATGCCTTCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRDQLLI*RCLLFK
Trigger: TTTAAACAGAAGGCATCTTCAGATGAGAAGCTGATC...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR TCA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGGGTTCCCCTAGGGAGTaGAAAAGAGAGTCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRGSPRE*KRESVV
Trigger: CACAACTGACTCTCTTTTTCACTCCCTAGGGGAACC...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR GCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATCTAAGATTTTCTCCTaGCGGAAAGAAGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSRSKIFS*RKEEAK
Trigger: CTTGGCCTCTTCTTTCCGGCAGGAGAAAATCTTAGA...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp GCAGGCCATAAGCAAAGGTGTGACACTCTTCAGAAGCCGGTCTTGAAGTCTCATGAGGGAGCTATATCTTaGAGGCCGACAGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: AGHKQRCDTLQKPVLKSHEGAIS*RPTASK
Trigger: CTTAGAAGCTGTCGGCCTGCAAGATATAGCTCCCTC...ATGAGACTTCAAGACCGGCTTCTGAAGAGTGTCACACCTTTGCTTATGGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR GCA 90 bp GGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATGAGGGAGCTATATCTTaGAGGCCGACAGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: GNCSESFRALVPECRLGNEGAIS*RPTASK
Trigger: CTTAGAAGCTGTCGGCCTGCAAGATATAGCTCCCTC...ATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp TATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTTTCTCGCTCATCCGCTaGATTTCTGCCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: YGNCSESFRALVPECRLGFSLIR*ISANFS
Trigger: GCTGAAGTTGGCAGAAATGCAGCGGATGAGCGAGAA...ACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AGTTTGCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCAAGGAGCCCCCGCCGCTaGCACGGAAGGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLLTLWILKRHVNLGPISRSPRR*HGRSFF
Trigger: GAAGAAACTCCTTCCGTGGCAGCGGCGGGGGCTCCT...TGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTCATTAAGTCTCTCAGAGAGGCCTGGAGCCTaGCGGCCGTGGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PHPIELFYTVAKISLSLSERPGA*RPWCFS
Trigger: GCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCTC...TGAGAGACTTAATGAAATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GTGAGAGAAAACTTGAGCAAGAGAAGAGACAGGCGTGGCCTATTTCCACACGCACTCGTCTTCAAACTCTaGTTCCCCTTCCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: VRENLSKRRDRRGLFPHALVFKL*FPFHEV
Trigger: GACCTCATGGAAGGGGAAGCAGAGTTTGAAGACGAG...TGCGTGTGGAAATAGGCCACGCCTGTCTCTTCTCTTGCTCAAGTTTTCTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATCTCGTCTTCAAACTCTaGTTCCCCTTCCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: GNCSESFRALVPECRLGNLVFKL*FPFHEV
Trigger: GACCTCATGGAAGGGGAAGCAGAGTTTGAAGACGAG...ATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp ACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTTTATCGGTCAGCTTCTaGTGGGCGAAGTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: TAETFVFMYTPNRTWALALSVSF*WAKSKS
Trigger: GGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAA...AGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAAC +
Preference number: 4 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVLCLYI*IILCRN
Trigger: GTTCCGACAGAGGATGATGCAGATGTACAGACACAA...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAAC +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCLCLYI*IILCRN
Trigger: GTTCCGACAGAGGATGATGCAGATGTACAGACACAA...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAATTGTGTCTGTACATCTaGATCATCCTCTGTCGGAAC +
Preference number: 4 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTELCLYI*IILCRN
Trigger: GTTCCGACAGAGGATGATGCAGATGTACAGACACAA...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR GCA 90 bp GTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACTTTAAGGGCAATTGCTaGTTCAAGGCTTATCTTTCA +
Preference number: 4 (lower is better)
Translates to: VGGNFSAYQHASEGRRPYFKGNC*FKAYLS
Trigger: TGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAA...GTAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AGAGAAGAGACAGGCGTGGCCTATTTCCACACGCACATCCACGGAGGCTGGCCTTGTTTTAAGGGCAATTaGTGCTTCAAGGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: REETGVAYFHTHIHGGWPCFKGN*CFKAYL
Trigger: AAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACA...AGGCCAGCCTCCGTGGATGTGCGTGTGGAAATAGGCCACGCCTGTCTCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCACTCCGCCCCAGAGACTaGAGAGACGTTTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: AETFVFMYTPNRTWALAPLRPRD*RDVCFH
Trigger: ATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAG...TGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTAACTGCTTTGGTACCCGAGTaGAGACTTGGTAATTACCGG +
Preference number: 4 (lower is better)
Translates to: RAKSAESQRVYNPHPFVTALVPE*RLGNYR
Trigger: CCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGC...AGTTACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp ACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTGGCCAGTGTGAGGTTTaGTCCTTCAGCAAACCTGGA +
Preference number: 4 (lower is better)
Translates to: TAETFVFMYTPNRTWALAGQCEV*SFSKPG
Trigger: TCCAGGTTTGCTGAAGGAGCAAACCTCACACTGGCC...AGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp ACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGGGGCATACATCTCTGCTCTaGATCTTGGGACTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: THSRNKEYSPSKSWLLRGHTSLL*ILGLPL
Trigger: TAAGGGCAGTCCCAAGATCCAGAGCAGAGATGTATG...CCCCCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCTATCTGCCATCGCTGTaGACGTCATCATACATCTCT +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESYLPSL*TSSYIS
Trigger: AGAGATGTATGATGACGTCCACAGCGATGGCAGATA...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTTGCCCCAATTTCCGGTaGCCAATGACCTGGTCCCGA +
Preference number: 4 (lower is better)
Translates to: PYKGCNKTALDDAIRAKSCPNFR*PMTWSR
Trigger: TCGGGACCAGGTCATTGGCCACCGGAAATTGGGGCA...ACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AAAGATGAGGATATTTACAGGCCCAAGGCCCTGCAGAAGGAAAAGGATTTGAAGTGCCCCAATTTCCGGTaGCCAATGACCTGGTCCCGA +
Preference number: 4 (lower is better)
Translates to: KDEDIYRPKALQKEKDLKCPNFR*PMTWSR
Trigger: TCGGGACCAGGTCATTGGCCACCGGAAATTGGGGCA...CTTCAAATCCTTTTCCTTCTGCAGGGCCTTGGGCCTGTAAATATCCTCATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTCTTTCTCAATCAGCCTaGAAGATCCAAAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SDGNKPETVKHPEWRESTLSQSA*KIQSPP
Trigger: TGGGGGACTTTGGATCTTCCAGGCTGATTGAGAAAG...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGGGTCACATCAGGACTTaGAGTGTTTTTCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGGHIRT*SVFLDL
Trigger: CAAATCCAGAAAAACACTCCAAGTCCTGATGTGACC...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGGGTCACATCAGGACTTaGAGTGTTTTTCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: WRIEWSYTQQSAGESGERGHIRT*SVFLDL
Trigger: CAAATCCAGAAAAACACTCCAAGTCCTGATGTGACC...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCGACTACTTGGAGCCTTaGCCTGAATTTCAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGDYLEP*PEFQVS
Trigger: CGAAACCTGAAATTCAGGCCAAGGCTCCAAGTAGTC...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp ACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGGGGGACTACTTGGAGCCTTaGCCTGAATTTCAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: THSRNKEYSPSKSWLLRGDYLEP*PEFQVS
Trigger: CGAAACCTGAAATTCAGGCCAAGGCTCCAAGTAGTC...CCCCCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCATCACTCAGACTACTTaGAGCCTTGGCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCITQTT*SLGLNF
Trigger: GAAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGAT...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTCCCCCGTATAAAACACGTTTCACAAGCTaGTCGATGGTGCCCACTACC +
Preference number: 4 (lower is better)
Translates to: WYPSADLVITGNLSPPYKTRFTS*SMVPTT
Trigger: GGTAGTGGGCACCATCGACCAGCTTGTGAAACGTGT...TTTATACGGGGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATGAAGAGTTCTCTCTTTaGGAGACAGGCTGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: QRASELWYPSADLVITGNEEFSL*ETGCLR
Trigger: TCGAAGGCAGCCTGTCTCCCAAAGAGAGAACTCTTC...ATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGAAGAGTTCTCTCTTTaGGAGACAGGCTGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: LTEHFWRAMASPTGKSAREEFSL*ETGCLR
Trigger: TCGAAGGCAGCCTGTCTCCCAAAGAGAGAACTCTTC...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCAATGTCAGCAGATaGGCAGGGAGAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ESFRALVPECRLGNYREFVNVSR*AGRRGL
Trigger: CAGACCTCTTCTCCCTGCCCATCTGCTGACATTGAC...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTCTCAGGCATCACCTCTaGGCTCTCCAGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NSGEQRENTICDRFHITFLRHHL*ALQLSL
Trigger: GAGGCTGAGCTGGAGAGCCCAGAGGTGATGCCTGAG...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACACACTCTCTTGGGAGCTaGAATCATGCCAACCTTCAA +
Preference number: 4 (lower is better)
Translates to: RSASAGRSPSPWVSSFWTHSLGS*NHANLQ
Trigger: TTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTG...TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597280.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp ATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCTGGGTTTCTTCTTTTTaGACATGGGACGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: MGSREWESSSRRKLHRNTWVSSF*TWDDPE
Trigger: CTCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCA...GGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCGAAGTCCAAGTCCTTaGGTTTCTTCTTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGRSPSP*VSSFWT
Trigger: TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCG...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGACATTTAACTATTTGTTaGCCCGCTTGTGTCTGTACA +
Preference number: 4 (lower is better)
Translates to: PCQGLTEPSQLKLGGAAGHLTIC*PACVCT
Trigger: TGTACAGACACAAGCGGGCCAACAAATAGTTAAATG...TCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR CCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTACCGTACTTGGGCACTaGCTCCAGGCCGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISTVLGH*LQADPG
Trigger: CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGT...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCCCCGTATAAATTCTaGCGAACAACGAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: ASETSAPETAETFVFMYTPPYKF*RTTRKH
Trigger: GTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGGG...TGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CTTTACAGCCAATACAAGTGGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTAAGAGCTTCAGAGCTTTaGTACCCGAGTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: LYSQYKWHFPLSSVADALRASEL*YPSADL
Trigger: CAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCT...TAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp TTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCTCATCAACTCAAGTATaGCAACTGTTCAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: FHVHTKPYLGTGSRPIQGSSTQV*QLFREL
Trigger: AAGCTCTCTGAACAGTTGCCATACTTGAGTTGATGA...GCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAACAAAGCACATGGAATaGTCAGGGCGATGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LTEHFWRAMASPTGKSARTKHME*SGRCWR
Trigger: TCTCCAGCATCGCCCTGACCATTCCATGTGCTTTGT...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp GTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGCCTCTTTTGGCTCCTaGATGAGACACACTCTCTTG +
Preference number: 4 (lower is better)
Translates to: VSFCWAKSKSLGFFFLDMASFGS*MRHTLL
Trigger: CAAGAGAGTGTGTCTCATCCAGGAGCCAAAAGAGGC...CATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CCA 90 bp TTTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGGGTTTAATAAACTTTaGGCCTGTGTTCGGGACCCT +
Preference number: 4 (lower is better)
Translates to: FWTWDDPEACHRQFELVHGFNKL*ACVRDP
Trigger: AGGGTCCCGAACACAGGCCCAAAGTTTATTAAACCC...ATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp AACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGGACGGCCTTACACACTaGCCTGTGAACATACCTATT +
Preference number: 4 (lower is better)
Translates to: NRALLESNGQSNWKISQRDGLTH*PVNIPI
Trigger: AATAGGTATGTTCACAGGCCAGTGTGTAAGGCCGTC...CCTCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CACTTAGCTTTTATGATGGTCACAAATGTGGCCAAAATGACCAGGGCCAACAAGCCGGCATCTCTAGAGTaGGCTACAGATCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: HLAFMMVTNVAKMTRANKPASLE*ATDPLR
Trigger: CCTCAGTGGATCTGTAGCTCACTCTAGAGATGCCGG...CTTGTTGGCCCTGGTCATTTTGGCCACATTTGTGACCATCATAAAAGCTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp ATGTCTGTCCCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTGGTGGTTTCTAAGTAGCTGTCATCACTaGTGGAAGGGTTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: MSVPKGPKTSGRESWWFLSSCHH*WKGCLI
Trigger: GATCAAGCAACCCTTCCATCAGTGATGACAGCTACT...TAGAAACCACCAACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR TCA 90 bp AAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCAGTAGCTGTCATCACTaGTGGAAGGGTTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: KPPPQRLQRRLFSCTHQTSSCHH*WKGCLI
Trigger: GATCAAGCAACCCTTCCATCAGTGATGACAGCTACT...GGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AAAGATGAGGATATTTACAGGCCCAAGGCCCTGCAGAAGGAAAAGGATTTGAAGATTTCCGGTGGCCAATaGCCTGGTCCCGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: KDEDIYRPKALQKEKDLKISGGQ*PGPENQ
Trigger: CTGATTCTCGGGACCAGGTCATTGGCCACCGGAAAT...CTTCAAATCCTTTTCCTTCTGCAGGGCCTTGGGCCTGTAAATATCCTCATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp TATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTGCAAATTTCCAGTCCTaGGAACGGAAATGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: YGNCSESFRALVPECRLGANFQS*ERKCPN
Trigger: ATTGGGGCATTTCCGTTCTCAGGACTGGAAATTTGC...ACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCACATTTCTCAATGTaGCAAGTTTCCCAACACCCC +
Preference number: 4 (lower is better)
Translates to: SDGNKPETVKHPEWRESTSHFSM*QVSQHP
Trigger: GGGGTGTTGGGAAACTTGTCACATTGAGAAATGTGA...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGAATTTGGTTAGTGCCCTaGGTTTTGGGAGTAATACGA +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSRIWLVP*VLGVIR
Trigger: TCGTATTACTCCCAAAACTCAGGGCACTAACCAAAT...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp TTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCCATCAGACTTATCTATaGTGTCAAAGCTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: FHVHTKPYLGTGSRPIQGHQTYL*CQSSSF
Trigger: GAAAGATGAGCTTTGACATCATAGATAAGTCTGATG...GCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGAATCCTGCCCATTTaGTTATTTCTATCCCAAATC +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSGILPI*LFLSQI
Trigger: GATTTGGGATAGAAATAATCAAATGGGCAGGATTCC...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCTTCAGAAGCCGGTCTTaGAGTCTCATTATGTACTTG +
Preference number: 4 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVFRSRS*SLIMYL
Trigger: CAAGTACATAATGAGACTTCAAGACCGGCTTCTGAA...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCTTCAGAAGCCGGTCTTaGAGTCTCATTATGTACTTG +
Preference number: 4 (lower is better)
Translates to: SSDGNKPETVKHPEWRESFRSRS*SLIMYL
Trigger: CAAGTACATAATGAGACTTCAAGACCGGCTTCTGAA...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AAAGATGAGGATATTTACAGGCCCAAGGCCCTGCAGAAGGAAAAGGATTTGAAGCAGGGAGAAGAGGTCTaGGGTGCTTCAGAGATGTCC +
Preference number: 4 (lower is better)
Translates to: KDEDIYRPKALQKEKDLKQGEEV*GASEMS
Trigger: GGACATCTCTGAAGCACCTCAGACCTCTTCTCCCTG...CTTCAAATCCTTTTCCTTCTGCAGGGCCTTGGGCCTGTAAATATCCTCATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCTGTTTTCTATGCTaGATTGTTCGATCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GNKPETVKHPEWRESTSRCCFLC*IVRSLV
Trigger: GACCAGAGATCGAACAATTCAGCATAGAAAACAGCA...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGCTTTTGGCTCCTGGATaGGACACACTCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: KGCNKTALDDAIRAKSAELLAPG*DTLSWE
Trigger: CTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAG...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp TTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTTCCCTACAATTCTCTAAGTaGTTTCCAGTGATGGAAACA +
Preference number: 4 (lower is better)
Translates to: LINFGPVFGTLAGPAMGSLQFSK*FPVMET
Trigger: TGTTTCCATCACTGGAAATCACTTAGAGAATTGTAG...GGAACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR GCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCATCCGCTGCATTTCTaGCAACTTCAGCTTGTAATA +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCHPLHF*QLQLVI
Trigger: TATTACAAGCTGAAGTTGGCAGAAATGCAGCGGATG...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp CCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGATTCTCGCTCATCCGCTaGATTTCTGCCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: PLLTKAVIRQHLTMPYVRFSLIR*ISANFS
Trigger: GCTGAAGTTGGCAGAAATGCAGCGGATGAGCGAGAA...TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CTGGTTACCTCGGAATGCCTTACCCAGCAGGAACTAAGCTCAGTATTAAATGAAGGTGTTTCAGCCTGGTaGCTGAGGATAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LVTSECLTQQELSSVLNEGVSAW*LRIGGS
Trigger: AGACCCTCCTATCCTCAGGCACCAGGCTGAAACACC...TTCATTTAATACTGAGCTTAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp GGCTTATCTTTCACATCAGTGGTTTTGATCTATTCAGGAAGAGAACGATTTTGTGAGAGGCCTGGAGCCTaGCGGCCGTGGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: GLSFTSVVLIYSGRERFCERPGA*RPWCFS
Trigger: GCTGAAACACCACGGCCGGCAGGCTCCAGGCCTCTC...ACAAAATCGTTCTCTTCCTGAATAGATCAAAACCACTGATGTGAAAGATAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp TGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACTCTAGCCAGTTTCTCTaGAGTCTCCATTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CRNTSNVSSLCSCPSAPNSSQFL*SLHCLH
Trigger: ATGAAGACAATGGAGACTGCAGAGAAACTGGCTAGA...GTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR GCA 90 bp CAACTCAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCTGGGAGCTGGAATCATaGCAACCTTCAATGACTTGC +
Preference number: 4 (lower is better)
Translates to: QLKYGNCSESFRALVPECWELES*QPSMTC
Trigger: GCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCA...GCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTGGGAGCTGGAATCATaGCAACCTTCAATGACTTGC +
Preference number: 4 (lower is better)
Translates to: PIQGRDDVLRAIAASRLIWELES*QPSMTC
Trigger: GCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCA...GATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GCAGGCCATAAGCAAAGGTGTGACACTCTTCAGAAGCCGGTCTTGAAGTCTCATTGGGAGCTGGAATCATaGCAACCTTCAATGACTTGC +
Preference number: 4 (lower is better)
Translates to: AGHKQRCDTLQKPVLKSHWELES*QPSMTC
Trigger: GCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCA...ATGAGACTTCAAGACCGGCTTCTGAAGAGTGTCACACCTTTGCTTATGGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR GCA 90 bp CATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAAC +
Preference number: 4 (lower is better)
Translates to: HHPLSEHIECVFFVLLPVLCLYI*IILCRN
Trigger: GTTCCGACAGAGGATGATGCAGATGTACAGACACAA...GACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR GCA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAAC +
Preference number: 4 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGLCLYI*IILCRN
Trigger: GTTCCGACAGAGGATGATGCAGATGTACAGACACAA...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGGTGGGTTTAAGGGCAATTGCTaGTTCAAGGCTTATCTTTCA +
Preference number: 4 (lower is better)
Translates to: QGLTEPSQLKLGGAAGGGFKGNC*FKAYLS
Trigger: TGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAA...CCCACCTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCAAACTTCAACGATCCTaGTTCACAAGGAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCKLQRS*FTRKDE
Trigger: CTCATCCTTCCTTGTGAAGCAGGATCGTTGAAGTTT...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp CCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTCTCAACCTCCTAAAGTaGTGGGATTACAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: PPQRLQRRLFSCTHQTVLLNLLK*WDYRLE
Trigger: CTCAAGCCTGTAATCCCAGCACTTTAGGAGGTTGAG...AAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAATGATCTCAGCTCACTaGAACCTCTGCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKMISAH*NLCLPG
Trigger: ACCGGGGAGGCAGAGGTTGCAGTGAGCTGAGATCAT...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp GAGACATGTAAATCTGGGGCCGATTTCATCTGTTTAATGATTACTCCCCACCCGTGGGGGAAATTTCTCTaGATACCAGCACGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: ETCKSGADFICLMITPHPWGKFL*IPARQR
Trigger: TCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCA...CGGGTGGGGAGTAATCATTAAACAGATGAAATCGGCCCCAGATTTACATGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGCTGCCATGTTATTTTaGCCTATGGTGAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: PQEEPASPYKGCNKTALDAAMLF*PMVREK
Trigger: TTTCTCTCTCACCATAGGGCAAAATAACATGGCAGC...GTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS-3UTR CCA 90 bp ACAGGAGAGGTGTCCTCTGAGAGTGTAGGGGGCTTTCTAGGTTCAAGGAGATGTTTACAGCCTCACCACTaGCATCCATGTGATATCGTT +
Preference number: 4 (lower is better)
Translates to: TGEVSSESVGGFLGSRRCLQPHH*HPCDIV
Trigger: AACGATATCACATGGATGCCAGTGGTGAGGCTGTAA...ACATCTCCTTGAACCTAGAAAGCCCCCTACACTCTCAGAGGACACCTCTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CCA 90 bp CAACTCAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCCATACATCTCTGCTCTaGATCTTGGGACTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: QLKYGNCSESFRALVPECHTSLL*ILGLPL
Trigger: TAAGGGCAGTCCCAAGATCCAGAGCAGAGATGTATG...GCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTATATCTGCCATCGCTGTaGACGTCATCATACATCTCT +
Preference number: 4 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVYLPSL*TSSYIS
Trigger: AGAGATGTATGATGACGTCCACAGCGATGGCAGATA...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp ACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACCTTTCTCAATCAGCCTaGAAGATCCAAAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: TALDDAIRAKSAESQRVYLSQSA*KIQSPP
Trigger: TGGGGGACTTTGGATCTTCCAGGCTGATTGAGAAAG...GTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGACTTTCTCAATCAGCCTaGAAGATCCAAAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LTEHFWRAMASPTGKSARLSQSA*KIQSPP
Trigger: TGGGGGACTTTGGATCTTCCAGGCTGATTGAGAAAG...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTGAGGGATCTTCTGAATaGGGAACTGGATATCTTCTG +
Preference number: 4 (lower is better)
Translates to: SDGNKPETVKHPEWRESTEGSSE*GTGYLL
Trigger: CAGAAGATATCCAGTTCCCCATTCAGAAGATCCCTC...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TCCATGAGATGCAGGTGTTTGGGACACACACTGAGACATCAAAGAAAGGGAAAAAGCCAGGCCTTCAGGTaGTCTATGTACTCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SMRCRCLGHTLRHQRKGKSQAFR*SMYSRP
Trigger: TGGGCGAGAGTACATAGACCACCTGAAGGCCTGGCT...TTTTCCCTTTCTTTGATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp GGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATGATGCTGAGGTCGGCTTCTaGTCGGCTCCTCGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GKAVPDGNYTEIPLSFYDAEVGF*SAPRKF
Trigger: GAACTTGCGAGGAGCCGACCAGAAGCCGACCTCAGC...ATCATAAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GGCCAAGGAAAATGTCTGTCCCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTGAATTGTTCGATCTCTaGTCCCACCTGAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: GQGKCLSQKGQRLPAERVELFDL*SHLSNK
Trigger: TTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTC...AACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACATTTTCCTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp GCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGCACTCTCTTGGGAGCTaGAATCATGCCAACCTTCAA +
Preference number: 4 (lower is better)
Translates to: APETAETFVFMYTPNRTWHSLGS*NHANLQ
Trigger: TTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAGTG...CCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCGACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGATTCGAACTGGTTCATaGACTTTTGGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: ATHSRNKEYSPSKSWLLRIRTGS*TFGSWM
Trigger: CATCCAGGAGCCAAAAGTCCATGAACCAGTTCGAAT...CCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000598240.1
CDS-3UTR CCA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTAATTCGAACTGGTTCATaGACTTTTGGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVIRTGS*TFGSWM
Trigger: CATCCAGGAGCCAAAAGTCCATGAACCAGTTCGAAT...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCATAGGCAATTCGAACTaGTTCATGGACTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCIGNSN*FMDFWL
Trigger: GAGCCAAAAGTCCATGAACCAGTTCGAATTGCCTAT...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTTCTTTTTGGACATaGGACGACCCCGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: KGCNKTALDDAIRAKSAESSFWT*DDPEAC
Trigger: ACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGA...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTTGGGTTTCTTCTTTTTaGACATGGGACGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: ESFRALVPECRLGNYREFWVSSF*TWDDPE
Trigger: CTCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCA...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCGAAGTCCAAGTCCTTaGGTTTCTTCTTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCRSPSP*VSSFWT
Trigger: TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCG...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCGAAGTCCAAGTCCTTaGGTTTCTTCTTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVRSPSP*VSSFWT
Trigger: TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCG...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAATCTCAGCTCAAACTTaGAGGAGCGGCAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKISAQT*RSGRRW
Trigger: CCACCTCCTGCCGCTCCTCCAAGTTTGAGCTGAGAT...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTCTAACAGAGCACTTCTaGAGAGCAATGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: ATVQRASELWYPSADLVILTEHF*RAMASP
Trigger: TGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAGAGCTTCAGAGCTTTaGTACCCGAGTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: PLLTKAVIRQHLTMPYVRRASEL*YPSADL
Trigger: CAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCT...TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGTCATCAACTCAAGTATaGCAACTGTTCAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSSSTQV*QLFREL
Trigger: AAGCTCTCTGAACAGTTGCCATACTTGAGTTGATGA...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp CCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGAGTGGAGAATTGAGTaGAGTTACACGCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PPQRLQRRLFSCTHQTVLEWRIE*SYTQQS
Trigger: ACTCTGCTGCGTGTAACTCCACTCAATTCTCCACTC...AAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp CGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTAACTGAGTGGAGAATTGAGTaGAGTTACACGCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RAKSAESQRVYNPHPFVTEWRIE*SYTQQS
Trigger: ACTCTGCTGCGTGTAACTCCACTCAATTCTCCACTC...AGTTACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp GTGAGAGAAAACTTGAGCAAGAGAAGAGACAGGCGTGGCCTATTTCCACACGCAGAGTGGAGAATTGAGTaGAGTTACACGCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: VRENLSKRRDRRGLFPHAEWRIE*SYTQQS
Trigger: ACTCTGCTGCGTGTAACTCCACTCAATTCTCCACTC...TGCGTGTGGAAATAGGCCACGCCTGTCTCTTCTCTTGCTCAAGTTTTCTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS-3UTR CCA 90 bp GCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAAACTGGTTCATGGACTaGGGCTTGGAAAACAGTCAG +
Preference number: 4 (lower is better)
Translates to: AETFVFMYTPNRTWALAPNWFMD*GLENSQ
Trigger: CTGACTGTTTTCCAAGCCCCAGTCCATGAACCAGTT...TGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CCA 90 bp GCATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTATTCGAACTGGTTCATaGACTGGGGCTTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: ASSSVGTHRMCLLCAPARIRTGS*TGAWKT
Trigger: TGTTTTCCAAGCCCCAGTCCATGAACCAGTTCGAAT...ACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CCA 90 bp TGCGGAGATGACGTGAAACAAATTGATGGACATAGTTCAAACACTTTCTTTCGACTGTGTTCGGGACCCTaGCTGGCCCGGCTATGGGTT +
Preference number: 4 (lower is better)
Translates to: CGDDVKQIDGHSSNTFFRLCSGP*LARLWV
Trigger: AACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAG...TCGAAAGAAAGTGTTTGAACTATGTCCATCAATTTGTTTCACGTCATCTCCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp AGATGCAGGTGTTTGGGACACACACTGAGACATCAAAGAAAGGGAAAATCAAGAGTGCCCAGAGGGCCCTaGTTACCTCGGAATGCCTTA +
Preference number: 4 (lower is better)
Translates to: RCRCLGHTLRHQRKGKSRVPRGP*LPRNAL
Trigger: TAAGGCATTCCGAGGTAACCAGGGCCCTCTGGGCAC...TCTTGATTTTCCCTTTCTTTGATGTCTCAGTGTGTGTCCCAAACACCTGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGACTCCTTCAGCAAACCTaGAAGGTAAGAATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LTEHFWRAMASPTGKSARLLQQT*KVRMGH
Trigger: ATGCCCCATTCTTACCTTCCAGGTTTGCTGAAGGAG...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTCATCCTCTGTGGCAGTaGCTGTCACAGTCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: NSGEQRENTICDRFHITFHPLWQ*LSQSPF
Trigger: GAAGGGCGACTGTGACAGCCACTGCCACAGAGGATG...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR CAA 72 bp TGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTaGTCTCCCCCGTATAAATTCTGGCGAACAACGAGA +
Preference number: 4 (lower is better)
Translates to: WYPSADLVITGN*SPPYKFWRTTR
Trigger: TCTCGTTGTTCGCCAGAATTTATACGGGGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CAA 72 bp CAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTaGGTAATTACCGGGAATTTGTCTCCCCCGTATAAA +
Preference number: 4 (lower is better)
Translates to: QRASELWYPSAD*VITGNLSPPYK
Trigger: TTTATACGGGGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CAA 72 bp CTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCACTaGACGATGCCATACGTGCGAAAAGTGCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LPLLTKAVIRQH*TMPYVRKVQSL
Trigger: GAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CAA 72 bp TGTACTCTCGCCCAAACAAAGTGGAGTCTTCGAAGTTaGGAAACGCAGCAGGTGAGGGAGCTATATCTTGCA +
Preference number: 4 (lower is better)
Translates to: CTLAQTKWSLRS*ETQQVRELYLA
Trigger: TGCAAGATATAGCTCCCTCACCTGCTGCGTTTCCAAACTTCGAAGACTCCACTTTGTTTGGGCGAGAGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR TCA 90 bp GCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTAGTAGCTGTCATCACTaGTGGAAGGGTTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: ASELWYPSADLVITGNLSSSCHH*WKGCLI
Trigger: GATCAAGCAACCCTTCCATCAGTGATGACAGCTACT...AGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATTTCCGGTGGCCAATaGCCTGGTCCCGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: GMGKQFQTETTQKYHLAFISGGQ*PGPENQ
Trigger: CTGATTCTCGGGACCAGGTCATTGGCCACCGGAAAT...AAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTAAAACTATACTCCTGTaGCCAAGAGGACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SDGNKPETVKHPEWRESTKTILL*PRGLLR
Trigger: TCTCAAGAGTCCTCTTGGTCACAGGAGTATAGTTTT...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GCGACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGAAAACTATACTCCTGTaGCCAAGAGGACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: ATHSRNKEYSPSKSWLLRKTILL*PRGLLR
Trigger: TCTCAAGAGTCCTCTTGGTCACAGGAGTATAGTTTT...CCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp GCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCATCACATTTCTCAATGTaGCAAGTTTCCCAACACCCC +
Preference number: 4 (lower is better)
Translates to: AETFVFMYTPNRTWALAPSHFSM*QVSQHP
Trigger: GGGGTGTTGGGAAACTTGTCACATTGAGAAATGTGA...TGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGCTTATCTTTCACATCAGTGGTTTTGATCTATTCAGGAAGAGAACGATTTTGTCTGCTTCCCCTTCCATaGGGTCCACGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GLSFTSVVLIYSGRERFCLLPLP*GPRGSP
Trigger: AGGAGAGCCCCGTGGACCTCATGGAAGGGGAAGCAG...ACAAAATCGTTCTCTTCCTGAATAGATCAAAACCACTGATGTGAAAGATAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTCATGCCAACCTTCAATaGCTTGCTGCTGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: LIGQLLLGEVQVLGFLLFHANLQ*LAADPL
Trigger: AAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATG...AAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597280.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGCTACAATTCTCTAAGTaGTTTCCAGTGATGGAAACA +
Preference number: 4 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSLQFSK*FPVMET
Trigger: TGTTTCCATCACTGGAAATCACTTAGAGAATTGTAG...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR TCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTCTACAATTCTCTAAGTaGTTTCCAGTGATGGAAACA +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPLQFSK*FPVMET
Trigger: TGTTTCCATCACTGGAAATCACTTAGAGAATTGTAG...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR TCA 90 bp TTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGGACGATCACATCAGTGGTTTTaGTCTATTTGTTGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: FCWAKSKSLGFFFLDMGRSHQWF*SICWPA
Trigger: AGCGGGCCAACAAATAGATCAAAACCACTGATGTGA...TCGTCCCATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR TCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTGGGTTTCGGCTGAGATaGGAAACGGGGCATCCGTCA +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISGFRLR*ETGHPS
Trigger: TGACGGATGCCCCGTTTCTCATCTCAGCCGAAACCC...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593795.5
CDS-3UTR TCA 90 bp AATTTGAAAGCAGAACTATTTTGGTCATGTAGAAACCACAGGTCAGGGTTATCGAAGCCATCTTGGCTGTaGAGGAGCCAAGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NLKAELFWSCRNHRSGLSKPSWL*RSQAAG
Trigger: GCCTGCCGCTTGGCTCCTTCACAGCCAAGATGGCTT...CGATAACCCTGACCTGTGGTTTCTACATGACCAAAATAGTTCTGCTTTCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR TCA 90 bp CTGGTTACCTCGGAATGCCTTACCCAGCAGGAACTAAGCTCAGTATTAAATGAACAAATGTGGCCAAAATaGCCAGGGCCAACAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LVTSECLTQQELSSVLNEQMWPK*PGPTSW
Trigger: CCAGCTTGTTGGCCCTGGTCATTTTGGCCACATTTG...TTCATTTAATACTGAGCTTAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp GAGGGCCCTGGTTACCTCGGAATGCCTTACCCAGCAGGAACTAAGCTCAGTATTAAGCTCAGTATTAAATaGAATGCCTGCTGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: EGPGYLGMPYPAGTKLSIKLSIK*NACWRL
Trigger: TAACCTCCAGCAGGCATTTCATTTAATACTGAGCTT...AATACTGAGCTTAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAGGGCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp GCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCATTACACACTGGCCTGTaGACATACCTATTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: AETFVFMYTPNRTWALAPLHTGL*TYLFVG
Trigger: GCCAACAAATAGGTATGTTCACAGGCCAGTGTGTAA...TGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTAGAAGGAAAAGGATTTaGAGACCCTCACAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: QVWQLFRELQSFGTRVQTRRKRI*RPSQRD
Trigger: GTCCCTTTGTGAGGGTCTTCAAATCCTTTTCCTTCT...AGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGATCTAAGATTTTCTCCTaGCGGAAAGAAGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LTEHFWRAMASPTGKSARSKIFS*RKEEAK
Trigger: CTTGGCCTCTTCTTTCCGGCAGGAGAAAATCTTAGA...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp ATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCTCTAAGATTTTCTCCTaGCGGAAAGAAGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: MGSREWESSSRRKLHRNTSKIFS*RKEEAK
Trigger: CTTGGCCTCTTCTTTCCGGCAGGAGAAAATCTTAGA...GGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGGAGGGAGCTATATCTTaGAGGCCGACAGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: KGCNKTALDDAIRAKSAEEGAIS*RPTASK
Trigger: CTTAGAAGCTGTCGGCCTGCAAGATATAGCTCCCTC...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp ACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGGGGCATCCGCTGCATTTCTaGCAACTTCAGCTTGTAATA +
Preference number: 4 (lower is better)
Translates to: THSRNKEYSPSKSWLLRGHPLHF*QLQLVI
Trigger: TATTACAAGCTGAAGTTGGCAGAAATGCAGCGGATG...CCCCCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp GCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCATCTGTGGTGTTTCAGCCTGGTaGCTGAGGATAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: AYTVDSKETCKSGADFICGVSAW*LRIGGS
Trigger: AGACCCTCCTATCCTCAGGCACCAGGCTGAAACACC...ACAGATGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCTAGCCAGTTTCTCTaGAGTCTCCATTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SDGNKPETVKHPEWRESTSSQFL*SLHCLH
Trigger: ATGAAGACAATGGAGACTGCAGAGAAACTGGCTAGA...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAAC +
Preference number: 4 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCLCLYI*IILCRN
Trigger: GTTCCGACAGAGGATGATGCAGATGTACAGACACAA...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp ATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCTTACAGCCTCACCACTaGCATCCATGTGATATCGTT +
Preference number: 4 (lower is better)
Translates to: MGSREWESSSRRKLHRNTLQPHH*HPCDIV
Trigger: AACGATATCACATGGATGCCAGTGGTGAGGCTGTAA...GGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GCAGGCCATAAGCAAAGGTGTGACACTCTTCAGAAGCCGGTCTTGAAGTCTCATTATCTGCCATCGCTGTaGACGTCATCATACATCTCT +
Preference number: 4 (lower is better)
Translates to: AGHKQRCDTLQKPVLKSHYLPSL*TSSYIS
Trigger: AGAGATGTATGATGACGTCCACAGCGATGGCAGATA...ATGAGACTTCAAGACCGGCTTCTGAAGAGTGTCACACCTTTGCTTATGGCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTCTTTCTCAATCAGCCTaGAAGATCCAAAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: ESFRALVPECRLGNYREFLSQSA*KIQSPP
Trigger: TGGGGGACTTTGGATCTTCCAGGCTGATTGAGAAAG...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTGGTCACATCAGGACTTaGAGTGTTTTTCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: SDGNKPETVKHPEWRESTGHIRT*SVFLDL
Trigger: CAAATCCAGAAAAACACTCCAAGTCCTGATGTGACC...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAGATATCTTCTGTCCCTaGGTTTGTCCCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKDIFCP*VCPQGH
Trigger: GTGACCCTGGGGACAAACCCAGGGACAGAAGATATC...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CAACTCAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCGAGGGATCTTCTGAATaGGGAACTGGATATCTTCTG +
Preference number: 4 (lower is better)
Translates to: QLKYGNCSESFRALVPECEGSSE*GTGYLL
Trigger: CAGAAGATATCCAGTTCCCCATTCAGAAGATCCCTC...GCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGAGGGATCTTCTGAATaGGGAACTGGATATCTTCTG +
Preference number: 4 (lower is better)
Translates to: LTEHFWRAMASPTGKSAREGSSE*GTGYLL
Trigger: CAGAAGATATCCAGTTCCCCATTCAGAAGATCCCTC...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AAAGATGAGGATATTTACAGGCCCAAGGCCCTGCAGAAGGAAAAGGATTTGAAGTCCGGCAGAGAGAGTTaGTGGTTTCTAGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KDEDIYRPKALQKEKDLKSGRES*WFLGQE
Trigger: CTCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGA...CTTCAAATCCTTTTCCTTCTGCAGGGCCTTGGGCCTGTAAATATCCTCATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CACTTAGCTTTTATGATGGTCACAAATGTGGCCAAAATGACCAGGGCCAACAAGCTCTCGCATCGGCTCTaGTTCGGCTTTCTTAACCTG +
Preference number: 4 (lower is better)
Translates to: HLAFMMVTNVAKMTRANKLSHRL*FGFLNL
Trigger: CAGGTTAAGAAAGCCGAACCAGAGCCGATGCGAGAG...CTTGTTGGCCCTGGTCATTTTGGCCACATTTGTGACCATCATAAAAGCTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGACTACTTGGAGCCTTaGCCTGAATTTCAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: ESFRALVPECRLGNYREFDYLEP*PEFQVS
Trigger: CGAAACCTGAAATTCAGGCCAAGGCTCCAAGTAGTC...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGAACAGTCCGTTTGCTGGTCATGTTATGTGGTAGGTGGCTGTCATCTGTGAGAATCACTCAGACTACTTaGAGCCTTGGCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: GTVRLLVMLCGRWLSSVRITQTT*SLGLNF
Trigger: GAAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGAT...TCTCACAGATGACAGCCACCTACCACATAACATGACCAGCAAACGGACTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TCCATGAGATGCAGGTGTTTGGGACACACACTGAGACATCAAAGAAAGGGAAAAACACGTTTCACAAGCTaGTCGATGGTGCCCACTACC +
Preference number: 4 (lower is better)
Translates to: SMRCRCLGHTLRHQRKGKTRFTS*SMVPTT
Trigger: GGTAGTGGGCACCATCGACCAGCTTGTGAAACGTGT...TTTTCCCTTTCTTTGATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CCA 90 bp CCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTACACGTTTCACAAGCTaGTCGATGGTGCCCACTACC +
Preference number: 4 (lower is better)
Translates to: PYKGCNKTALDDAIRAKSTRFTS*SMVPTT
Trigger: GGTAGTGGGCACCATCGACCAGCTTGTGAAACGTGT...ACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGGAATTGTTCGATCTCTaGTCCCACCTGAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRELFDL*SHLSNK
Trigger: TTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTC...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp ACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACGAATTGTTCGATCTCTaGTCCCACCTGAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: TALDDAIRAKSAESQRVYELFDL*SHLSNK
Trigger: TTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTC...GTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTAAAGCAGAACTATTTTaGTCATGTAGAAACCACAGG +
Preference number: 4 (lower is better)
Translates to: QARDSKAPRVAREHFQMPKAELF*SCRNHR
Trigger: CCTGTGGTTTCTACATGACCAAAATAGTTCTGCTTT...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp CTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTAAAGCAGAACTATTTTaGTCATGTAGAAACCACAGG +
Preference number: 4 (lower is better)
Translates to: LEAQVLIGQLLLGEVQVLKAELF*SCRNHR
Trigger: CCTGTGGTTTCTACATGACCAAAATAGTTCTGCTTT...AAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp TCCATGAGATGCAGGTGTTTGGGACACACACTGAGACATCAAAGAAAGGGAAAAGTAAAGCACCCAGAGTaGCGAGAGAGCACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SMRCRCLGHTLRHQRKGKVKHPE*RESTSR
Trigger: TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC...TTTTCCCTTTCTTTGATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR CCA 90 bp GCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGACTTCTGGAGAGCAATaGCCAGTCCAACTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: APETAETFVFMYTPNRTWTSGEQ*PVQLEN
Trigger: ATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGT...CCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTCCCCCGTATAAATTCTaGCGAACAACGAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: YGNCSESFRALVPECRLGPPYKF*RTTRKH
Trigger: GTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGGG...ACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCCAGTCCAACTGGAAAATCAGCCAGAGGAGCTGGTTCCTCAGCACTCACAGGCAGTTTGCTTACACTGTaGATTCTAAAGAGACATGTA +
Preference number: 4 (lower is better)
Translates to: ASPTGKSARGAGSSALTGSLLTL*ILKRHV
Trigger: TACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT...GCCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGATTTTCCAGTTGGACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGTCGCCCTTCCACTTGCATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTAGTTTGCTTACACTGTaGATTCTAAAGAGACATGTA +
Preference number: 4 (lower is better)
Translates to: SRPSTCMMARPSGLGTVRSLLTL*ILKRHV
Trigger: TACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT...ACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCATTAAGAGGGAGGGGCTaGGGGCACGGAGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPLRGRG*GHGGPV
Trigger: CACTGGCCCTCCGTGCCCCCAGCCCCTCCCTCTTAA...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp GGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATGGGTTCCCGGGAATaGGAAAGCAGTTCCAGACGG +
Preference number: 4 (lower is better)
Translates to: GMGKQFQTETTQKYHLAFMGSRE*ESSSRR
Trigger: CCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT...AAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp AATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATTGGCTGGCCCGGCTATaGGTTCCCGGGAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: NGKAVPDGNYTEIPLSFYWLARL*VPGNGK
Trigger: TTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCCA...ATAAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTCTCCTTCAGCAAACCTaGAAGGTAAGAATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: ATVQRASELWYPSADLVILLQQT*KVRMGH
Trigger: ATGCCCCATTCTTACCTTCCAGGTTTGCTGAAGGAG...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGAACAGTCCGTTTGCTaGTCATGTTATGTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: PPQRLQRRLFSCTHQTVLEQSVC*SCYVVG
Trigger: ACCTACCACATAACATGACCAGCAAACGGACTGTTC...AAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTATTTCCGGTGGCCAATaGCCTGGTCCCGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISISGGQ*PGPENQ
Trigger: CTGATTCTCGGGACCAGGTCATTGGCCACCGGAAAT...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCACCTCTGGCCTGGACTTaGCTGCCGCCCCTAAGCACA +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPPLAWT*LPPLST
Trigger: TGTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGG...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp AAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCATTTGGTTAGTGCCCTaGGTTTTGGGAGTAATACGA +
Preference number: 4 (lower is better)
Translates to: KPPPQRLQRRLFSCTHQTIWLVP*VLGVIR
Trigger: TCGTATTACTCCCAAAACTCAGGGCACTAACCAAAT...GGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CCCTTTGACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGACATCAGACTTATCTATaGTGTCAAAGCTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: PFDPCQGLTEPSQLKLGGHQTYL*CQSSSF
Trigger: GAAAGATGAGCTTTGACATCATAGATAAGTCTGATG...TCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR TCA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCATCAGACTTATCTATaGTGTCAAAGCTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: NKPETVKHPEWRESTSRCHQTYL*CQSSSF
Trigger: GAAAGATGAGCTTTGACATCATAGATAAGTCTGATG...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCGGAATCCTGCCCATTTaGTTATTTCTATCCCAAATC +
Preference number: 4 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGGILPI*LFLSQI
Trigger: GATTTGGGATAGAAATAATCAAATGGGCAGGATTCC...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCAGGGGACATCCGCTGCTaGCTAGCCAGGCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPGDIRC*LARPSG
Trigger: ACCTGAAGGCCTGGCTAGTCAGCAGCGGATGTCCCC...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp CCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTTGTGCGGAGATGACGTaGAACAAATTGATGGACATA +
Preference number: 4 (lower is better)
Translates to: PPQRLQRRLFSCTHQTVLCAEMT*NKLMDI
Trigger: TATGTCCATCAATTTGTTTCACGTCATCTCCGCACA...AAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCACTGCTTCCCCTTCCATaGGGTCCACGGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPLLPLP*GPRGSP
Trigger: AGGAGAGCCCCGTGGACCTCATGGAAGGGGAAGCAG...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCATCTGTCTTTTGGCTCCTGGATaGGACACACTCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: AYTVDSKETCKSGADFICLLAPG*DTLSWE
Trigger: CTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAG...ACAGATGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp TACAGCCAATACAAGTGGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTAGCCCTACAATTCTCTAAGTaGTTTCCAGTGATGGAAACA +
Preference number: 4 (lower is better)
Translates to: YSQYKWHFPLSSVADALALQFSK*FPVMET
Trigger: TGTTTCCATCACTGGAAATCACTTAGAGAATTGTAG...GGCTAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR TCA 90 bp TTTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGATGCATTGATGAGATaGGACACCATGAATAACACA +
Preference number: 4 (lower is better)
Translates to: FWTWDDPEACHRQFELVHDALMR*DTMNNT
Trigger: TGTGTTATTCATGGTGTCTCATCTCATCAATGCATC...ATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR TCA 90 bp CCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTCATTAAGTCTCTCAGCTCAGTTCTGTGGCTaGTGCCCTAGCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: PHPIELFYTVAKISLSLSAQFCG*CPSHCC
Trigger: ACAGCAGTGGCTAGGGCATCAGCCACAGAACTGAGC...TGAGAGACTTAATGAAATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR TCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTCTGGTCTCAAACTCCTaGCCTCAGGTGATCCATCCG +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISLVSNS*PQVIHP
Trigger: CGGATGGATCACCTGAGGTCAGGAGTTTGAGACCAG...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR TCA 90 bp CCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAGAAGGAAAAGGATTTaGAGACCCTCACAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: PLLTKAVIRQHLTMPYVRRRKRI*RPSQRD
Trigger: GTCCCTTTGTGAGGGTCTTCAAATCCTTTTCCTTCT...TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCATATGGTGTGGAATCCTaGCCATTTGATTATTTCTAT +
Preference number: 4 (lower is better)
Translates to: GSRPIQGRDDVLRAIAASYGVES*PFDYFY
Trigger: ATAGAAATAATCAAATGGGCAGGATTCCACACCATA...TGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTTCTAAGATTTTCTCCTaGCGGAAAGAAGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: ATVQRASELWYPSADLVISKIFS*RKEEAK
Trigger: CTTGGCCTCTTCTTTCCGGCAGGAGAAAATCTTAGA...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTCAAGCTGGTCGATGGTaGCCACTACCCTGTGATCTG +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISQAGRW*PLPCDL
Trigger: CAGATCACAGGGTAGTGGGCACCATCGACCAGCTTG...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AGTTTGCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCAGGTGTTTCAGCCTGGTaGCTGAGGATAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SLLTLWILKRHVNLGPISGVSAW*LRIGGS
Trigger: AGACCCTCCTATCCTCAGGCACCAGGCTGAAACACC...TGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTTCTAGCCAGTTTCTCTaGAGTCTCCATTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCSSQFL*SLHCLH
Trigger: ATGAAGACAATGGAGACTGCAGAGAAACTGGCTAGA...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAACTCGTCTTCAAACTCTaGTTCCCCTTCCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKLVFKL*FPFHEV
Trigger: GACCTCATGGAAGGGGAAGCAGAGTTTGAAGACGAG...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTCTCGTCTTCAAACTCTaGTTCCCCTTCCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: GNGKAVPDGNYTEIPLSFLVFKL*FPFHEV
Trigger: GACCTCATGGAAGGGGAAGCAGAGTTTGAAGACGAG...AAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTGGGAGCTGGAATCATaGCAACCTTCAATGACTTGC +
Preference number: 4 (lower is better)
Translates to: KGCNKTALDDAIRAKSAEWELES*QPSMTC
Trigger: GCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCA...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCATCTGTAATGTGTCTTCTTTGTaGTCCTGCCCGTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: AYTVDSKETCKSGADFICNVSSL*SCPSAP
Trigger: GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATT...ACAGATGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp TACAGCCAATACAAGTGGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTAGCCTTTAAGGGCAATTGCTaGTTCAAGGCTTATCTTTCA +
Preference number: 4 (lower is better)
Translates to: YSQYKWHFPLSSVADALAFKGNC*FKAYLS
Trigger: TGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAA...GGCTAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp CCCTTTGACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGATGTTTTAAGGGCAATTaGTGCTTCAAGGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: PFDPCQGLTEPSQLKLGGCFKGN*CFKAYL
Trigger: AAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACA...TCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp CCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCTTTGGTACCCGAGTaGAGACTTGGTAATTACCGG +
Preference number: 4 (lower is better)
Translates to: PYKGCNKTALDDAIRAKSALVPE*RLGNYR
Trigger: CCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGC...ACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CGATTTCATCTGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTGCGGGGGCGATCACATaGCTGGAAATAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RFHLFNDYSPPDRAILYCAGAIT*LEIEQL
Trigger: CAGCTGCTCTATTTCCAGGCATGTGATCGCCCCCGC...ACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACAGATGAAATCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp CCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTAAACTTCAACGATCCTaGTTCACAAGGAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: PPQRLQRRLFSCTHQTVLKLQRS*FTRKDE
Trigger: CTCATCCTTCCTTGTGAAGCAGGATCGTTGAAGTTT...AAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTAAACAGTCCATGAGATaGAGGTGTTTGGGACACACA +
Preference number: 4 (lower is better)
Translates to: ATVQRASELWYPSADLVIKQSMR*RCLGHT
Trigger: TGTGTGTCCCAAACACCTGCATCTCATGGACTGTTT...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp GCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCATCTGTGATATCTTCTGTCCCTaGGTTTGTCCCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: AYTVDSKETCKSGADFICDIFCP*VCPQGH
Trigger: GTGACCCTGGGGACAAACCCAGGGACAGAAGATATC...ACAGATGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGAGCATCATTTCTGTCTaGCAGGGATGGTTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: KGCNKTALDDAIRAKSAESIISV*QGWFCL
Trigger: CAGGCAAAACCATCCCTGCCAGACAGAAATGATGCT...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATGATCTGAGGCTTCTAAGCTaGGGTCCTGAGGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GKAVPDGNYTEIPLSFYDLRLLS*GPEEKV
Trigger: GACCTTCTCCTCAGGACCCCAGCTTAGAAGCCTCAG...ATCATAAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CCCCAGGAGGAGCCTGCCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACAAAGCAGAACTATTTTaGTCATGTAGAAACCACAGG +
Preference number: 4 (lower is better)
Translates to: PQEEPASPYKGCNKTALDKAELF*SCRNHR
Trigger: CCTGTGGTTTCTACATGACCAAAATAGTTCTGCTTT...GTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGGCAGGCTCCTCCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452918.7
ENST00000601879.5
CDS-3UTR CCA 90 bp GGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATGATTCTCCTGAGAACCCGTaGTGTCACCACCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: GKAVPDGNYTEIPLSFYDSPENP*CHHHQC
Trigger: ACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGA...ATCATAAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGATCTTCTTTTTGGACATaGGACGACCCCGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRSSFWT*DDPEAC
Trigger: ACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGA...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCCGAAGTCCAAGTCCTTaGGTTTCTTCTTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: PIQGRDDVLRAIAASRLIRSPSP*VSSFWT
Trigger: TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCG...GATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCGAAGTCCAAGTCCTTaGGTTTCTTCTTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRRSPSP*VSSFWT
Trigger: TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCG...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGAACATCAACTTTGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGTCATCAACTCAAGTATaGCAACTGTTCAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GTSTLLGEISLHTSTPARSSTQV*QLFREL
Trigger: AAGCTCTCTGAACAGTTGCCATACTTGAGTTGATGA...CCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACAAAGTTGATGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCTTCCACTTGCATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTTTGCTGAGTTTGCTTACACTGTaGATTCTAAAGAGACATGTA +
Preference number: 4 (lower is better)
Translates to: PSTCMMARPSGLGTVRLLSLLTL*ILKRHV
Trigger: TACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT...CAGCAAACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTTACAGCCAATACAAGTaGCATTTCCCGCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ASELWYPSADLVITGNLSYSQYK*HFPLSS
Trigger: AGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTA...AGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CCA 90 bp CCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCAACATACCTATTTGTTaGCCCGCTTGTGTCTGTACA +
Preference number: 4 (lower is better)
Translates to: PIQGRDDVLRAIAASRLINIPIC*PACVCT
Trigger: TGTACAGACACAAGCGGGCCAACAAATAGGTATGTT...GATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
3UTR CAA 72 bp GAGAAAACACCATCTGTGATCGTTTCCACATCACGTTaGCTAACAGAGCACTTCTGGAGAGCAATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: EKTPSVIVSTSR*LTEHFWRAMAS
Trigger: ACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAGCAAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CAA 72 bp CAGGTCAGGGTTATCGGTGCTGTTTTCTATGCTGAATaGTTCGATCTCTGGTCCCACCTGAGCAACAAATCT +
Preference number: 4 (lower is better)
Translates to: QVRVIGAVFYAE*FDLWSHLSNKS
Trigger: AGATTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTCAGCATAGAAAACAGCACCGATAACCCTGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR TCA 90 bp CCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTCATTAAGTCTCTCAGAGCTACAGATCCACTaGGGGAGTATCTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: PHPIELFYTVAKISLSLSELQIH*GSICHR
Trigger: GCGATGGCAGATACTCCCTCAGTGGATCTGTAGCTC...TGAGAGACTTAATGAAATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AAAGATGAGGATATTTACAGGCCCAAGGCCCTGCAGAAGGAAAAGGATTTGAAGAGTAGCTGTCATCACTaGTGGAAGGGTTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: KDEDIYRPKALQKEKDLKSSCHH*WKGCLI
Trigger: GATCAAGCAACCCTTCCATCAGTGATGACAGCTACT...CTTCAAATCCTTTTCCTTCTGCAGGGCCTTGGGCCTGTAAATATCCTCATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTATTTGGTTAGTGCCCTaGGTTTTGGGAGTAATACGA +
Preference number: 4 (lower is better)
Translates to: ASELWYPSADLVITGNLSIWLVP*VLGVIR
Trigger: TCGTATTACTCCCAAAACTCAGGGCACTAACCAAAT...AGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATGATTGGAAACGCAGCAGGTaGGGGAGCTATATCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GKAVPDGNYTEIPLSFYDWKRSR*GSYILQ
Trigger: CTGCAAGATATAGCTCCCTCACCTGCTGCGTTTCCA...ATCATAAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp GCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCATCTGTATCTCTGGTCCCACCTaGGCAACAAATCTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: AYTVDSKETCKSGADFICISGPT*ATNLAS
Trigger: ACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGAT...ACAGATGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTTGTGCGGAGATGACGTaGAACAAATTGATGGACATA +
Preference number: 4 (lower is better)
Translates to: ATVQRASELWYPSADLVICAEMT*NKLMDI
Trigger: TATGTCCATCAATTTGTTTCACGTCATCTCCGCACA...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTGATCCAGGGCAGGGATaGTGTTTTAAGGGCAATTGC +
Preference number: 4 (lower is better)
Translates to: NSGEQRENTICDRFHITFDPGQG*CFKGNC
Trigger: GCAATTGCCCTTAAAACATCATCCCTGCCCTGGATC...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGATCAGCTTCTCATCTaGAGATGCCTTCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: VSFCWAKSKSLGFFFLDMDQLLI*RCLLFK
Trigger: TTTAAACAGAAGGCATCTTCAGATGAGAAGCTGATC...CATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp CGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAATATGGTGTGGAATCCTaGCCATTTGATTATTTCTAT +
Preference number: 4 (lower is better)
Translates to: RLWVPGNGKAVPDGNYTEYGVES*PFDYFY
Trigger: ATAGAAATAATCAAATGGGCAGGATTCCACACCATA...TTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR GCA 90 bp CCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGACATCCGCTGCATTTCTaGCAACTTCAGCTTGTAATA +
Preference number: 4 (lower is better)
Translates to: PLLTKAVIRQHLTMPYVRHPLHF*QLQLVI
Trigger: TATTACAAGCTGAAGTTGGCAGAAATGCAGCGGATG...TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCAAGAGATGTCCACTCCTaGTGGCTTGGGGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPRDVHS*WLGGWA
Trigger: GGCCCATCCCCCAAGCCAGCAGGAGTGGACATCTCT...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp AGTTTGCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCAAATGTGTCTTCTTTGTaGTCCTGCCCGTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: SLLTLWILKRHVNLGPISNVSSL*SCPSAP
Trigger: GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATT...TGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CGATTTCATCTGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTGTGCCCTTTGACCCCTaGCAAGGACTCACAGAACCA +
Preference number: 4 (lower is better)
Translates to: RFHLFNDYSPPDRAILYCVPFDP*QGLTEP
Trigger: TGGTTCTGTGAGTCCTTGGCAGGGGTCAAAGGGCAC...ACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACAGATGAAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTTTAAGGGCAATTGCTaGTTCAAGGCTTATCTTTCA +
Preference number: 4 (lower is better)
Translates to: SDGNKPETVKHPEWRESTFKGNC*FKAYLS
Trigger: TGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAA...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp ACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGGGGTTTAAGGGCAATTGCTaGTTCAAGGCTTATCTTTCA +
Preference number: 4 (lower is better)
Translates to: THSRNKEYSPSKSWLLRGFKGNC*FKAYLS
Trigger: TGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAA...CCCCCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR GCA 90 bp ATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCATGTTTTAAGGGCAATTaGTGCTTCAAGGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: ILCRNTSNVSSLCSCPSACFKGN*CFKAYL
Trigger: AAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACA...TGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR GCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGCATACGTGCGAAAAGTaGAGAGTCTCAGAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: KGCNKTALDDAIRAKSAEHTCEK*RVSEGL
Trigger: TAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTAAACTCCATCCTCCATaGTGGCACCTCTACTGCCAT +
Preference number: 4 (lower is better)
Translates to: NSGEQRENTICDRFHITFKLHPP*WHLYCH
Trigger: ATGGCAGTAGAGGTGCCAGCATGGAGGATGGAGTTT...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR GCA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTGGCTTTTGAGGGGGTaGCCAGAGGGCCCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: CLMITPHPIELFYTVAKIWLLRG*PEGPGY
Trigger: GTAACCAGGGCCCTCTGGGCACCCCCTCAAAAGCCA...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp CGATTTCATCTGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTAGCCAGGCCTTCAGGTaGTCTATGTACTCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: RFHLFNDYSPPDRAILYCSQAFR*SMYSRP
Trigger: TGGGCGAGAGTACATAGACCACCTGAAGGCCTGGCT...ACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACAGATGAAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AATTTGAAAGCAGAACTATTTTGGTCATGTAGAAACCACAGGTCAGGGTTATCGTCTCCTGAGAACCCGTaGTGTCACCACCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: NLKAELFWSCRNHRSGLSSPENP*CHHHQC
Trigger: ACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGA...CGATAACCCTGACCTGTGGTTTCTACATGACCAAAATAGTTCTGCTTTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CCA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAATGGTTCATGGACTTTTaGCTCCTGGATGAGACACAC +
Preference number: 4 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKWFMDF*LLDETH
Trigger: GTGTGTCTCATCCAGGAGCCAAAAGTCCATGAACCA...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTATAGGCAATTCGAACTaGTTCATGGACTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: ESFRALVPECRLGNYREFIGNSN*FMDFWL
Trigger: GAGCCAAAAGTCCATGAACCAGTTCGAATTGCCTAT...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp ACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTATAGGCAATTCGAACTaGTTCATGGACTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: TAETFVFMYTPNRTWALAIGNSN*FMDFWL
Trigger: GAGCCAAAAGTCCATGAACCAGTTCGAATTGCCTAT...AGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp ATGTCTGTCCCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTGGTGGTTTCTACATCAGACTTATCTATaGTGTCAAAGCTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: MSVPKGPKTSGRESWWFLHQTYL*CQSSSF
Trigger: GAAAGATGAGCTTTGACATCATAGATAAGTCTGATG...TAGAAACCACCAACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR TCA 90 bp TTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGGACGACATCAGACTTATCTATaGTGTCAAAGCTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: FCWAKSKSLGFFFLDMGRHQTYL*CQSSSF
Trigger: GAAAGATGAGCTTTGACATCATAGATAAGTCTGATG...TCGTCCCATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp CCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTCATCAGACTTATCTATaGTGTCAAAGCTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: PPQRLQRRLFSCTHQTVLHQTYL*CQSSSF
Trigger: GAAAGATGAGCTTTGACATCATAGATAAGTCTGATG...AAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTGATGCATTGATGAGATaGGACACCATGAATAACACA +
Preference number: 4 (lower is better)
Translates to: ASELWYPSADLVITGNLSDALMR*DTMNNT
Trigger: TGTGTTATTCATGGTGTCTCATCTCATCAATGCATC...AGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCCTGCTGGAGGTTATaGTCGGGGTTTAATAAACTT +
Preference number: 4 (lower is better)
Translates to: PYKGCNKTALDDAIRAKSACWRL*SGFNKL
Trigger: AAGTTTATTAAACCCCGATCATAACCTCCAGCAGGC...ACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR GCA 90 bp GGCCAAGGAAAATGTCTGTCCCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTTATGGTGTGGAATCCTaGCCATTTGATTATTTCTAT +
Preference number: 4 (lower is better)
Translates to: GQGKCLSQKGQRLPAERVYGVES*PFDYFY
Trigger: ATAGAAATAATCAAATGGGCAGGATTCCACACCATA...AACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACATTTTCCTTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR GCA 90 bp CCCCGTATAAATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACTCTAGCCAGTTTCTCTaGAGTCTCCATTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PRINSGEQRENTICDRFHSSQFL*SLHCLH
Trigger: ATGAAGACAATGGAGACTGCAGAGAAACTGGCTAGA...GTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AAAGATGAGGATATTTACAGGCCCAAGGCCCTGCAGAAGGAAAAGGATTTGAAGTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAAC +
Preference number: 4 (lower is better)
Translates to: KDEDIYRPKALQKEKDLKLCLYI*IILCRN
Trigger: GTTCCGACAGAGGATGATGCAGATGTACAGACACAA...CTTCAAATCCTTTTCCTTCTGCAGGGCCTTGGGCCTGTAAATATCCTCATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCATCCCGACACCTTCACTaGCCCAGCGCTGAATCCACA +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPSRHLH*PSAEST
Trigger: TGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGA...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR GCA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGATGTTTTAAGGGCAATTaGTGCTTCAAGGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: LTEHFWRAMASPTGKSARCFKGN*CFKAYL
Trigger: AAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACA...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGAAACTTCAACGATCCTaGTTCACAAGGAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: KGCNKTALDDAIRAKSAEKLQRS*FTRKDE
Trigger: CTCATCCTTCCTTGTGAAGCAGGATCGTTGAAGTTT...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTTGTAATTCGTCTGGCTaGCATGTTATTTTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: NSGEQRENTICDRFHITFCNSSG*HVILPR
Trigger: GCGGGGCAAAATAACATGGCAGCCAGACGAATTACA...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000600377.1
CDS-3UTR CCA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAGAGGGATCTTCTGAATaGGGAACTGGATATCTTCTG +
Preference number: 4 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKEGSSE*GTGYLL
Trigger: CAGAAGATATCCAGTTCCCCATTCAGAAGATCCCTC...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CGATTTCATCTGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTGGCAGAGAGAGTTGGTaGTTTCTAGGGCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: RFHLFNDYSPPDRAILYCGRESW*FLGQEP
Trigger: TGGCTCTTGCCCTAGAAACCACCAACTCTCTCTGCC...ACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACAGATGAAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGCTTATCTTTCACATCAGTGGTTTTGATCTATTCAGGAAGAGAACGATTTTGTAGCCAGGCCTTCAGGTaGTCTATGTACTCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GLSFTSVVLIYSGRERFCSQAFR*SMYSRP
Trigger: TGGGCGAGAGTACATAGACCACCTGAAGGCCTGGCT...ACAAAATCGTTCTCTTCCTGAATAGATCAAAACCACTGATGTGAAAGATAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTCATTAAGTCTCTCACTCTCGCATCGGCTCTaGTTCGGCTTTCTTAACCTG +
Preference number: 4 (lower is better)
Translates to: PHPIELFYTVAKISLSLSLSHRL*FGFLNL
Trigger: CAGGTTAAGAAAGCCGAACCAGAGCCGATGCGAGAG...TGAGAGACTTAATGAAATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CTGGTTACCTCGGAATGCCTTACCCAGCAGGAACTAAGCTCAGTATTAAATGAAATCACTCAGACTACTTaGAGCCTTGGCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: LVTSECLTQQELSSVLNEITQTT*SLGLNF
Trigger: GAAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGAT...TTCATTTAATACTGAGCTTAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAAAAGCAGAACTATTTTaGTCATGTAGAAACCACAGG +
Preference number: 4 (lower is better)
Translates to: VISSDGNKPETVKHPEWRKAELF*SCRNHR
Trigger: CCTGTGGTTTCTACATGACCAAAATAGTTCTGCTTT...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATAAAGCAGAACTATTTTaGTCATGTAGAAACCACAGG +
Preference number: 4 (lower is better)
Translates to: GNCSESFRALVPECRLGNKAELF*SCRNHR
Trigger: CCTGTGGTTTCTACATGACCAAAATAGTTCTGCTTT...ATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTACACCAAACCGTACTTaGGCACTGGCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: CLMITPHPIELFYTVAKITPNRT*ALAPGR
Trigger: TCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTAGAGCTTCAGAGCTTTaGTACCCGAGTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISRASEL*YPSADL
Trigger: CAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCT...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CACTTAGCTTTTATGATGGTCACAAATGTGGCCAAAATGACCAGGGCCAACAAGAAAACTATACTCCTGTaGCCAAGAGGACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: HLAFMMVTNVAKMTRANKKTILL*PRGLLR
Trigger: TCTCAAGAGTCCTCTTGGTCACAGGAGTATAGTTTT...CTTGTTGGCCCTGGTCATTTTGGCCACATTTGTGACCATCATAAAAGCTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp CTGGTTACCTCGGAATGCCTTACCCAGCAGGAACTAAGCTCAGTATTAAATGAATTCAGAAGCCGGTCTTaGAGTCTCATTATGTACTTG +
Preference number: 4 (lower is better)
Translates to: LVTSECLTQQELSSVLNEFRSRS*SLIMYL
Trigger: CAAGTACATAATGAGACTTCAAGACCGGCTTCTGAA...TTCATTTAATACTGAGCTTAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp CCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTTTCAGAAGCCGGTCTTaGAGTCTCATTATGTACTTG +
Preference number: 4 (lower is better)
Translates to: PYKGCNKTALDDAIRAKSFRSRS*SLIMYL
Trigger: CAAGTACATAATGAGACTTCAAGACCGGCTTCTGAA...ACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTAGAAAACACCATCTGTaGTCGTTTCCACATCACGTT +
Preference number: 4 (lower is better)
Translates to: GNGKAVPDGNYTEIPLSFRKHHL*SFPHHV
Trigger: AACGTGATGTGGAAACGATCACAGATGGTGTTTTCT...AAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR GCA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGATATGGTGTGGAATCCTaGCCATTTGATTATTTCTAT +
Preference number: 4 (lower is better)
Translates to: VISSDGNKPETVKHPEWRYGVES*PFDYFY
Trigger: ATAGAAATAATCAAATGGGCAGGATTCCACACCATA...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR GCA 90 bp GGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTATGGTGTGGAATCCTaGCCATTTGATTATTTCTAT +
Preference number: 4 (lower is better)
Translates to: GNCSESFRALVPECRLGNYGVES*PFDYFY
Trigger: ATAGAAATAATCAAATGGGCAGGATTCCACACCATA...ATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGATATGGTGTGGAATCCTaGCCATTTGATTATTTCTAT +
Preference number: 4 (lower is better)
Translates to: LTEHFWRAMASPTGKSARYGVES*PFDYFY
Trigger: ATAGAAATAATCAAATGGGCAGGATTCCACACCATA...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTTCTAAGATTTTCTCCTaGCGGAAAGAAGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: NSGEQRENTICDRFHITFSKIFS*RKEEAK
Trigger: CTTGGCCTCTTCTTTCCGGCAGGAGAAAATCTTAGA...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AAAGATGAGGATATTTACAGGCCCAAGGCCCTGCAGAAGGAAAAGGATTTGAAGCATCCGCTGCATTTCTaGCAACTTCAGCTTGTAATA +
Preference number: 4 (lower is better)
Translates to: KDEDIYRPKALQKEKDLKHPLHF*QLQLVI
Trigger: TATTACAAGCTGAAGTTGGCAGAAATGCAGCGGATG...CTTCAAATCCTTTTCCTTCTGCAGGGCCTTGGGCCTGTAAATATCCTCATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp ACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTTGTTTTAAGGGCAATTaGTGCTTCAAGGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: TAETFVFMYTPNRTWALACFKGN*CFKAYL
Trigger: AAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACA...AGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTCTCAACCTCCTAAAGTaGTGGGATTACAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISLNLLK*WDYRLE
Trigger: CTCAAGCCTGTAATCCCAGCACTTTAGGAGGTTGAG...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR GCA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTTATTTAGCCTTTGGATaGAGATTAAATGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: ATVQRASELWYPSADLVIYLAFG*RLNVPL
Trigger: CAGAGGGACATTTAATCTGCATCCAAAGGCTAAATA...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CCA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGATATCTGCCATCGCTGTaGACGTCATCATACATCTCT +
Preference number: 4 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRYLPSL*TSSYIS
Trigger: AGAGATGTATGATGACGTCCACAGCGATGGCAGATA...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTCTTTCTCAATCAGCCTaGAAGATCCAAAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISLSQSA*KIQSPP
Trigger: TGGGGGACTTTGGATCTTCCAGGCTGATTGAGAAAG...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGGTCACATCAGGACTTaGAGTGTTTTTCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: PYKGCNKTALDDAIRAKSGHIRT*SVFLDL
Trigger: CAAATCCAGAAAAACACTCCAAGTCCTGATGTGACC...ACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGCTTATCTTTCACATCAGTGGTTTTGATCTATTCAGGAAGAGAACGATTTTGTGATATCTTCTGTCCCTaGGTTTGTCCCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: GLSFTSVVLIYSGRERFCDIFCP*VCPQGH
Trigger: GTGACCCTGGGGACAAACCCAGGGACAGAAGATATC...ACAAAATCGTTCTCTTCCTGAATAGATCAAAACCACTGATGTGAAAGATAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCAAGCCAGGCCTTCAGGTaGTCTATGTACTCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPSQAFR*SMYSRP
Trigger: TGGGCGAGAGTACATAGACCACCTGAAGGCCTGGCT...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp TGCGGAGATGACGTGAAACAAATTGATGGACATAGTTCAAACACTTTCTTTCGAGAAGAGTTCTCTCTTTaGGAGACAGGCTGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: CGDDVKQIDGHSSNTFFREEFSL*ETGCLR
Trigger: TCGAAGGCAGCCTGTCTCCCAAAGAGAGAACTCTTC...TCGAAAGAAAGTGTTTGAACTATGTCCATCAATTTGTTTCACGTCATCTCCGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTTGGTTCATGGACTTTTaGCTCCTGGATGAGACACAC +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISWFMDF*LLDETH
Trigger: GTGTGTCTCATCCAGGAGCCAAAAGTCCATGAACCA...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTATAGGCAATTCGAACTaGTTCATGGACTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISIGNSN*FMDWGL
Trigger: CAAGCCCCAGTCCATGAACCAGTTCGAATTGCCTAT...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CCA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAATGTTATGTGGTAGGTaGCTGTCATCTGTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKMLCGR*LSSVRE
Trigger: TTCTCTCACAGATGACAGCCACCTACCACATAACAT...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCATGGAAACGCAGCAGGTaGGGGAGCTATATCTTGCAG +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPWKRSR*GSYILQ
Trigger: CTGCAAGATATAGCTCCCTCACCTGCTGCGTTTCCA...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GGCTTATCTTTCACATCAGTGGTTTTGATCTATTCAGGAAGAGAACGATTTTGTCTTGGAGCCTTGGCCTaGATTTCAGGTTTCGTAGGA +
Preference number: 4 (lower is better)
Translates to: GLSFTSVVLIYSGRERFCLGALA*ISGFVG
Trigger: TCCTACGAAACCTGAAATTCAGGCCAAGGCTCCAAG...ACAAAATCGTTCTCTTCCTGAATAGATCAAAACCACTGATGTGAAAGATAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCACTTTTGGCTCCTGGATaGGACACACTCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPLLAPG*DTLSWE
Trigger: CTCCCAAGAGAGTGTGTCTCATCCAGGAGCCAAAAG...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR TCA 90 bp GGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATGATGTTTGGGACACACACTaGGACATCAAAGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: GKAVPDGNYTEIPLSFYDVWDTH*DIKERE
Trigger: TTCCCTTTCTTTGATGTCTCAGTGTGTGTCCCAAAC...ATCATAAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR GCA 90 bp GCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCATCTGTTCTAGCCAGTTTCTCTaGAGTCTCCATTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: AYTVDSKETCKSGADFICSSQFL*SLHCLH
Trigger: ATGAAGACAATGGAGACTGCAGAGAAACTGGCTAGA...ACAGATGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTAATGTGTCTTCTTTGTaGTCCTGCCCGTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: CLMITPHPIELFYTVAKINVSSL*SCPSAP
Trigger: GGGTGCTGACGGGCAGGAGCACAAAGAAGACACATT...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAAC +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISLCLYI*IILCRN
Trigger: GTTCCGACAGAGGATGATGCAGATGTACAGACACAA...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CCCCGTATAAATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACTGTTTTAAGGGCAATTaGTGCTTCAAGGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: PRINSGEQRENTICDRFHCFKGN*CFKAYL
Trigger: AAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACA...GTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTGGTCACATCAGGACTTaGAGTGTTTTTCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: NSGEQRENTICDRFHITFGHIRT*SVFLDL
Trigger: CAAATCCAGAAAAACACTCCAAGTCCTGATGTGACC...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TGCGGAGATGACGTGAAACAAATTGATGGACATAGTTCAAACACTTTCTTTCGAGACTACTTGGAGCCTTaGCCTGAATTTCAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: CGDDVKQIDGHSSNTFFRDYLEP*PEFQVS
Trigger: CGAAACCTGAAATTCAGGCCAAGGCTCCAAGTAGTC...TCGAAAGAAAGTGTTTGAACTATGTCCATCAATTTGTTTCACGTCATCTCCGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp AATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATGACTACTTGGAGCCTTaGCCTGAATTTCAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: NGKAVPDGNYTEIPLSFYDYLEP*PEFQVS
Trigger: CGAAACCTGAAATTCAGGCCAAGGCTCCAAGTAGTC...ATAAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCATCACAAGCTGGTCGATaGTGCCCACTACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPSQAGR*CPLPCD
Trigger: ATCACAGGGTAGTGGGCACCATCGACCAGCTTGTGA...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GAGACATGTAAATCTGGGGCCGATTTCATCTGTTTAATGATTACTCCCCACCCGAAAGCAGAACTATTTTaGTCATGTAGAAACCACAGG +
Preference number: 4 (lower is better)
Translates to: ETCKSGADFICLMITPHPKAELF*SCRNHR
Trigger: CCTGTGGTTTCTACATGACCAAAATAGTTCTGCTTT...CGGGTGGGGAGTAATCATTAAACAGATGAAATCGGCCCCAGATTTACATGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp CGATTTCATCTGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGGTTCATGGACTTTTaGCTCCTGGATGAGACACAC +
Preference number: 4 (lower is better)
Translates to: RFHLFNDYSPPDRAILYCWFMDF*LLDETH
Trigger: GTGTGTCTCATCCAGGAGCCAAAAGTCCATGAACCA...ACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACAGATGAAATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCATCTTCTTTTTGGACATaGGACGACCCCGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPSSFWT*DDPEAC
Trigger: ACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGA...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp ACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTAAAGCAGAACTATTTTaGTCATGTAGAAACCTCTCT +
Preference number: 4 (lower is better)
Translates to: TAETFVFMYTPNRTWALAKAELF*SCRNLS
Trigger: AGAGAGGTTTCTACATGACCAAAATAGTTCTGCTTT...AGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR TCA 90 bp GGCTTATCTTTCACATCAGTGGTTTTGATCTATTCAGGAAGAGAACGATTTTGTCATGCCAACCTTCAATaGCTTGCTGCTGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: GLSFTSVVLIYSGRERFCHANLQ*LAADPL
Trigger: AAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATG...ACAAAATCGTTCTCTTCCTGAATAGATCAAAACCACTGATGTGAAAGATAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGAGATGCATTGATGAGATaGGACACCATGAATAACACA +
Preference number: 4 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRDALMR*DTMNNT
Trigger: TGTGTTATTCATGGTGTCTCATCTCATCAATGCATC...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp CCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTCATTAAGTCTCTCATTGTGTCTGTACATCTaGATCATCCTCTGTCGGAAC +
Preference number: 4 (lower is better)
Translates to: PHPIELFYTVAKISLSLSLCLYI*IILCRN
Trigger: GTTCCGACAGAGGATGATGCAGATGTACAGACACAA...TGAGAGACTTAATGAAATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCAGCTTTGGTACCCGAGTaGAGACTTGGTAATTACCGG +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPALVPE*RLGNYR
Trigger: CCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGC...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTGGTCACATCAGGACTTaGAGTGTTTTTCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISGHIRT*SVFLDL
Trigger: CAAATCCAGAAAAACACTCCAAGTCCTGATGTGACC...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GGCTTATCTTTCACATCAGTGGTTTTGATCTATTCAGGAAGAGAACGATTTTGTAGCATCATTTCTGTCTaGCAGGGATGGTTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GLSFTSVVLIYSGRERFCSIISV*QGWFCL
Trigger: CAGGCAAAACCATCCCTGCCAGACAGAAATGATGCT...ACAAAATCGTTCTCTTCCTGAATAGATCAAAACCACTGATGTGAAAGATAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTCGAAGTCCAAGTCCTTaGGTTTCTTCTTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISRSPSP*VSSFWT
Trigger: TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCG...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR TCA 90 bp GGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTCATCAGACTTATCTATaGTGTCAAAGCTCATCTTTC +
Preference number: 4 (lower is better)
Translates to: GMGKQFQTETTQKYHLAFHQTYL*CQSSSF
Trigger: GAAAGATGAGCTTTGACATCATAGATAAGTCTGATG...AAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR TCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTGGAATCCTGCCCATTTaGTTATTTCTATCCCAAATC +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISGILPI*LFLSQI
Trigger: GATTTGGGATAGAAATAATCAAATGGGCAGGATTCC...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCATGTAATTCGTCTGGCTaGCATGTTATTTTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPCNSSG*HVILPP
Trigger: CGGGGGCAAAATAACATGGCAGCCAGACGAATTACA...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
CDS-3UTR GCA 90 bp TGCGGAGATGACGTGAAACAAATTGATGGACATAGTTCAAACACTTTCTTTCGATCTAGCCAGTTTCTCTaGAGTCTCCATTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CGDDVKQIDGHSSNTFFRSSQFL*SLHCLH
Trigger: ATGAAGACAATGGAGACTGCAGAGAAACTGGCTAGA...TCGAAAGAAAGTGTTTGAACTATGTCCATCAATTTGTTTCACGTCATCTCCGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CCA 90 bp CCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTCATTAAGTCTCTCACGAAGTCCAAGTCCTTaGGTTTCTTCTTTTTGGACA +
Preference number: 4 (lower is better)
Translates to: PHPIELFYTVAKISLSLSRSPSP*VSSFWT
Trigger: TGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCG...TGAGAGACTTAATGAAATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCACCTGGAACTATTTGTTaGCCCGCTTGTGTCTGTACA +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPPGTIC*PACVCT
Trigger: TGTACAGACACAAGCGGGCCAACAAATAGTTCCAGG...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337018.10
3UTR CAA 72 bp GAGGGTTTACAACCCCCATCCCTTTGTAACTGTAGTTaGCTTACACTGTGGATTCTAAAGAGACATGTAAAT +
Preference number: 4 (lower is better)
Translates to: EGLQPPSLCNCS*LTLWILKRHVN
Trigger: ATTTACATGTCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTGTAAACCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CAA 72 bp CATAAGCAAAGGTGTGACACTCTTCAGAAGCCGGTCTaGAAGTCTCATTATGTACTTGTCAAAAGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: HKQRCDTLQKPV*KSHYVLVKRLY
Trigger: ATAAAGCCTTTTGACAAGTACATAATGAGACTTCAAGACCGGCTTCTGAAGAGTGTCACACCTTTGCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR GCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTTTTAAGGGCAATTGCTaGTTCAAGGCTTATCTTTCA +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISFKGNC*FKAYLS
Trigger: TGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAA...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CCA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTCCCCCGTATAAATTCTaGCGAACAACGAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: CLMITPHPIELFYTVAKIPPYKF*RTTRKH
Trigger: GTGTTTTCTCGTTGTTCGCCAGAATTTATACGGGGG...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTTATGGTGTGGAATCCTaGCCATTTGATTATTTCTAT +
Preference number: 4 (lower is better)
Translates to: RDDVLRAIAASRLIFHISYGVES*PFDYFY
Trigger: ATAGAAATAATCAAATGGGCAGGATTCCACACCATA...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR GCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCACATCCGCTGCATTTCTaGCAACTTCAGCTTGTAATA +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPHPLHF*QLQLVI
Trigger: TATTACAAGCTGAAGTTGGCAGAAATGCAGCGGATG...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CCA 90 bp GGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATGATAGTTTGCTTACACTGTaGATTCTAAAGAGACATGTA +
Preference number: 4 (lower is better)
Translates to: GKAVPDGNYTEIPLSFYDSLLTL*ILKRHV
Trigger: TACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT...ATCATAAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR TCA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCACTACAATTCTCTAAGTaGTTTCCAGTGATGGAAACA +
Preference number: 4 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPLQFSK*FPVMET
Trigger: TGTTTCCATCACTGGAAATCACTTAGAGAATTGTAG...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR GCA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTTTAAGGGCAATTGCTaGTTCAAGGCTTATCTTTCA +
Preference number: 4 (lower is better)
Translates to: CLMITPHPIELFYTVAKIFKGNC*FKAYLS
Trigger: TGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAA...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
3UTR CAA 72 bp TTGCTGCTTCAAGGCTTATCTTTCACATCAGTGGTTTaGATCTATTCAGGAAGAGAACGATTTTGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LLLQGLSFTSVV*IYSGRERFCSK
Trigger: TTTTGAACAAAATCGTTCTCTTCCTGAATAGATCAAAACCACTGATGTGAAAGATAAGCCTTGAAGCAGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS CCA 90 bp GACCGGGTGAGACGCTGCGGCTGCCGAGGCCTGTCCCGCGCGGAGTaGGGAGTGGGGGTGCCGCAGGGTCGGGCTGGCGCGACCCTCGGG +
Preference number: 5 (lower is better)
Translates to: DRVRRCGCRGLSRAE*GVGVPQGRAGATLG
Trigger: CCCGAGGGTCGCGCCAGCCCGACCCTGCGGCACCCCCACTCCCCACTCCGCGCGGGACAGGCCTCGGCAGCCGCAGCGTCTCACCCGGTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS GCA 90 bp GCTGGTGTGGGGGCTGAACCGGTTCTAAAGAGGGCAAGGGCCCGATaGAGCGCTGGGCGCCGTTATCTCCTCCCGAGCGGGGGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: AGVGAEPVLKRARAR*SAGRRYLLPSGGRS
Trigger: GGAGCGGCCCCCGCTCGGGAGGAGATAACGGCGCCCAGCGCTGCATCGGGCCCTTGCCCTCTTTAGAACCGGTTCAGCCCCCACACCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594445.1
CDS TCA 90 bp GGGGCCGCTCCGAGTTCGGGAGGAATGAATGAACGACTGAACCAATaGGCCTTTGTGGACGCGGCCCGCCGTCTCCCGGCCTCTGCGGGC +
Preference number: 5 (lower is better)
Translates to: GAAPSSGGMNERLNQ*AFVDAARRLPASAG
Trigger: GCCCGCAGAGGCCGGGAGACGGCGGGCCGCGTCCACAAAGGCTCATTGGTTCAGTCGTTCATTCATTCCTCCCGAACTCGGAGCGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594445.1
CDS-3UTR CAA 90 bp GTGCTCCAGCCAGGTCGTCCTCGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGGTTCCGGCAGAGAGAGTaGGTGGTTTCTAGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: VLQPGRPRQPRREGRRQGFRQRE*VVSRAR
Trigger: TCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGAA...CCCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGGACGACCTGGCTGGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp GTGCTCCAGCCAGGTCGTCCTCGGCAGCCTCGCCGGGAAGGCCGTCGGCAGGGGTGGAGTCTTCGAAGTTaGGAAACGCAGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: VLQPGRPRQPRREGRRQGWSLRS*ETQQVR
Trigger: CCTCACCTGCTGCGTTTCCAAACTTCGAAGACTCCA...CCCCTGCCGACGGCCTTCCCGGCGAGGCTGCCGAGGACGACCTGGCTGGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp GTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACGGCTGCCATGTTATTTaGCCCCGCCGCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: VGGNFSAYQHASEGRRPYGCHVI*PRRRRR
Trigger: GCGGCGGCGGCGGCGGGGCAAAATAACATGGCAGCC...GTAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600377.1
CDS-3UTR CAA 90 bp GTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTCACACCAAACCGTACTaGGGCACTGGCTCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: VFFVLLPVSTQPFPFRGGHTKPY*GTGSRP
Trigger: CGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTG...ACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp CGGGGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGGGTGACCCTGGAATaGGGCACTGGCTCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: RGLINFGPVFGTLAGPAMGVTLE*GTGSRP
Trigger: CGGCCTGGAGCCAGTGCCCAATTCCAGGGTCACCCC...CATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS TCA 90 bp TATCTCCTCCCGAGCGGGGGCCGCTCCGAGTTCGGGAGGAATGAATaGACGACTGAACCAATGAGCCTTTGTGGACGCGGCCCGCCGTCT +
Preference number: 5 (lower is better)
Translates to: YLLPSGGRSEFGRNE*TTEPMSLCGRGPPS
Trigger: AGACGGCGGGCCGCGTCCACAAAGGCTCATTGGTTCAGTCGTTCATTCATTCCTCCCGAACTCGGAGCGGCCCCCGCTCGGGAGGAGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594445.1
CDS-3UTR CAA 90 bp ATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAATTGGGCACTGGCTCCAGGCCGGGAAGGAGTTTCTTCTaGAGGTTGCGGACAGCCCGG +
Preference number: 5 (lower is better)
Translates to: MPVVLSGVTLELGTGSRPGRSFF*RLRTAR
Trigger: CCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCC...CGGCCTGGAGCCAGTGCCCAATTCCAGGGTCACCCCCGAGAGGACAACAGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR CAA 90 bp ATCCTCTTCCGAGGGAAGCAGGTACCTGAGGAGGCCTGTGACAAGGCAGGTGCTACCTCTGGCCTGGACTaGACTGCCGCCCCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: ILFRGKQVPEEACDKAGATSGLD*TAAPKH
Trigger: GTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGGT...AGCACCTGCCTTGTCACAGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CAA 90 bp GGCAGGCCATGCGCATCTGCCCTTGGCCAGTGTGAGGTTTGCTCCTTCAGCAAAACCTCTGGCCTGGACTaGACTGCCGCCCCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: GRPCASALGQCEVCSFSKTSGLD*TAAPKH
Trigger: GTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGGT...TTTGCTGAAGGAGCAAACCTCACACTGGCCAAGGGCAGATGCGCATGGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCCTTCTGTCCCTGGGTTaGTCCCCAGGGTCACATCAG +
Preference number: 5 (lower is better)
Translates to: LLCAPARQHPTLPLPRGFLLSLG*SPGSHQ
Trigger: CTGATGTGACCCTGGGGACAAACCCAGGGACAGAAG...GAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CAA 90 bp AGACAGGCGTGGCCTATTTCCACACGCACATCCACGGAGGCTGGCCTGGAGGCCAGTTTCTTCTTGAGGTaGCGGACAGCCCGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: RQAWPISTRTSTEAGLEASFFLR*RTAREY
Trigger: GTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACT...GGCCTCCAGGCCAGCCTCCGTGGATGTGCGTGTGGAAATAGGCCACGCCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGGGAAGGAGTTTCTTCTaGAGGTTGCGGACAGCCCGG +
Preference number: 5 (lower is better)
Translates to: CLLCAPARQHPTLPLPRGGRSFF*RLRTAR
Trigger: CCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCC...CCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CAA 90 bp GCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCAGCCAACCTTCAATGACTaGCTGCTGATCCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: ACCVHADRLPDALSEGAQPTFND*LLILFR
Trigger: TCGGAAGAGGATCAGCAGCAAGTCATTGAAGGTTGG...CTGGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp TCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGCACACCAAACCGTACTaGGGCACTGGCTCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: SCTHQTVLGHWLQADPGQHTKPY*GTGSRP
Trigger: CGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTG...CTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAACTGGAGAGAGTGCGCTaGATCCACGCTGCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: VAREHFQMPVVLSGVTLELERVR*IHAAGV
Trigger: CACACCTGCAGCGTGGATCAAGCGCACTCTCTCCAG...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CAA 90 bp ATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAATTGGGCACTGGCTCCAGGCCGGGCTGCCATGTTATTTaGCCCTTGGTTCGCGGTCGT +
Preference number: 5 (lower is better)
Translates to: MPVVLSGVTLELGTGSRPGCHVI*PLVRGR
Trigger: ACGACCGCGAACCAAGGGCAAAATAACATGGCAGCC...CGGCCTGGAGCCAGTGCCCAATTCCAGGGTCACCCCCGAGAGGACAACAGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS TCA 90 bp CCTTCCTGGTCAACGATGTTTAGAGCTCGACCTCTGGCCTGGACTTaGCTGCCGCCCCTAAGCACAGAGTCAGCCTCCCCAGGATGGTCC +
Preference number: 5 (lower is better)
Translates to: PSWSTMFRARPLAWT*LPPLSTESASPGWS
Trigger: GGACCATCCTGGGGAGGCTGACTCTGTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGGTCGAGCTCTAAACATCGTTGACCAGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
ENST00000598202.1
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AGACAGGCGTGGCCTATTTCCACACGCACATCCACGGAGGCTGGCCTGGAGGCCTGGATGGCCAAAGTCTaGTTCCCAAGAACCACGGAG +
Preference number: 5 (lower is better)
Translates to: RQAWPISTRTSTEAGLEAWMAKV*FPRTTE
Trigger: CTCCGTGGTTCTTGGGAACAAGACTTTGGCCATCCA...GGCCTCCAGGCCAGCCTCCGTGGATGTGCGTGTGGAAATAGGCCACGCCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGACCTCTGGCCTGGACTaGACTGCCGCCCCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRTSGLD*TAAPKH
Trigger: GTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGGT...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGCTTCTGTCCCTGGGTTaGTCCCCAGGGTCACATCAG +
Preference number: 5 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLLLSLG*SPGSHQ
Trigger: CTGATGTGACCCTGGGGACAAACCCAGGGACAGAAG...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp CTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCAGTTTCTTCTTGAGGTaGCGGACAGCCCGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: LLCAPARQHPTLPLPRGFSFFLR*RTAREY
Trigger: GTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACT...GAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CAA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAGGAAGGAGTTTCTTCTaGAGGTTGCGGACAGCCCGG +
Preference number: 5 (lower is better)
Translates to: SGERALPDACCPLGGDPGGRSFF*RLRTAR
Trigger: CCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCC...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGCTGGCAGGGATGGTTTaGCCTGTGAGAGGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PLPRTHRTISAQTWRSGRLAGMV*PVRGLE
Trigger: CTCCAGGCCTCTCACAGGCAAAACCATCCCTGCCAG...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CAA 90 bp GGCAGGCCATGCGCATCTGCCCTTGGCCAGTGTGAGGTTTGCTCCTTCAGCAAACTGGCAGGGATGGTTTaGCCTGTGAGAGGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: GRPCASALGQCEVCSFSKLAGMV*PVRGLE
Trigger: CTCCAGGCCTCTCACAGGCAAAACCATCCCTGCCAG...TTTGCTGAAGGAGCAAACCTCACACTGGCCAAGGGCAGATGCGCATGGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCCCACGCTGACCGGCGTTTTGATCTATTTGTaGGCCCGCTTGTGTCTGTAC +
Preference number: 5 (lower is better)
Translates to: CPSAPNPSPSEGVPTLTGVLIYL*ARLCLY
Trigger: GTACAGACACAAGCGGGCCAACAAATAGATCAAAAC...GCCGGTCAGCGTGGGAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593795.5
ENST00000597280.5
CDS-3UTR CAA 90 bp TTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCGGTTCGCGGTCGTCCTaGGTTATCGTGAGCGTCCGC +
Preference number: 5 (lower is better)
Translates to: FHVHTKPYLGTGSRPIQGGSRSS*VIVSVR
Trigger: GCGGACGCTCACGATAACCAAGGACGACCGCGAACC...GCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS TCA 90 bp TCGGGTCAATGGGCTGAGCCCCGCTTGGAGCTCCATCCATTCACCTaGCCCATGGCCAACATGGAAGCAAACCGTACTTGGGCACTGGCT +
Preference number: 5 (lower is better)
Translates to: SGQWAEPRLELHPFT*PMANMEANRTWALA
Trigger: AGCCAGTGCCCAAGTACGGTTTGCTTCCATGTTGGCCATGGGTCAGGTGAATGGATGGAGCTCCAAGCGGGGCTCAGCCCATTGACCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598863.1
CDS-3UTR CAA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGCTTCTGTCCCTGGGTTaGTCCCCAGGGTCACATCAG +
Preference number: 5 (lower is better)
Translates to: PLPRTHRTISAQTWRSGRLLSLG*SPGSHQ
Trigger: CTGATGTGACCCTGGGGACAAACCCAGGGACAGAAG...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CAA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTAGTTTCTTCTTGAGGTaGCGGACAGCCCGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: QSGERALPDACCPLGGDPSFFLR*RTAREY
Trigger: GTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACT...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp CTGGAACATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCATCTGGCGGGCAGTCCTaGGCAGCATCATTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: LEHALLAPDTFTAPALNPSGGQS*AASFLS
Trigger: AGACAGAAATGATGCTGCCAAGGACTGCCCGCCAGA...TGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR CAA 90 bp CTGCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCTCTCTGCAGTCTCCATaGTCTTCATGTCAATGTCAG +
Preference number: 5 (lower is better)
Translates to: LPAAYTLTGSLMPFPREPSLQSP*SSCQCQ
Trigger: CTGACATTGACATGAAGACAATGGAGACTGCAGAGA...GGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp TTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTTCCCACGTATTTGTTGGCCCGCTaGTGTCTGTACATCTGCATC +
Preference number: 5 (lower is better)
Translates to: LCSCPSAPNPSPSEGVPTYLLAR*CLYICI
Trigger: GATGCAGATGTACAGACACAAGCGGGCCAACAAATA...CGTGGGAACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593795.5
ENST00000597280.5
CDS-3UTR CAA 90 bp GTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTCATGTTATTTTGCCCTaGGTTCGCGGTCGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: VFFVLLPVSTQPFPFRGGHVILP*VRGRPW
Trigger: CCAAGGACGACCGCGAACCAAGGGCAAAATAACATG...ACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS CCA 90 bp GGGAGTATCTGCCATCGCTGTGGACGTCATCATACATCTCTGCTCTaGATCTTGGGACTGCCCTTAAGAGATCCCGAGACCACCGCGCGC +
Preference number: 5 (lower is better)
Translates to: GSICHRCGRHHTSLL*ILGLPLRDPETTAR
Trigger: GCGCGCGGTGGTCTCGGGATCTCTTAAGGGCAGTCCCAAGATCCAGAGCAGAGATGTATGATGACGTCCACAGCGATGGCAGATACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598202.1
CDS-3UTR CAA 90 bp GCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGTCTCTGCTCTGGATCTaGGGACTGCCCTTAAGAGAT +
Preference number: 5 (lower is better)
Translates to: APRVAREHFQMPVVLSGVSLLWI*GLPLRD
Trigger: ATCTCTTAAGGGCAGTCCCAAGATCCAGAGCAGAGA...CACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGTGGATGGCCAAAGTCTaGTTCCCAAGAACCACGGAG +
Preference number: 5 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLWMAKV*FPRTTE
Trigger: CTCCGTGGTTCTTGGGAACAAGACTTTGGCCATCCA...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACCTCTGGCCTGGACTaGACTGCCGCCCCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: SSDGNKPETVKHPEWRESTSGLD*TAAPKH
Trigger: GTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGGT...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGAACCTCTGGCCTGGACTaGACTGCCGCCCCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: GNKPETVKHPEWRESTSRTSGLD*TAAPKH
Trigger: GTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGGT...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp CCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGCTTCTGTCCCTGGGTTaGTCCCCAGGGTCACATCAG +
Preference number: 5 (lower is better)
Translates to: PAKDSQNHLSSNLEERQELLSLG*SPGSHQ
Trigger: CTGATGTGACCCTGGGGACAAACCCAGGGACAGAAG...CTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CAA 90 bp GTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAATGGAGTCTTCGAAGTTaGGAAACGCAGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: VAREHFQMPVVLSGVTLEWSLRS*ETQQVR
Trigger: CCTCACCTGCTGCGTTTCCAAACTTCGAAGACTCCA...TTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp ATCCTCTTCCGAGGGAAGCAGGTACCTGAGGAGGCCTGTGACAAGGCAGGTGCTAGTTTCTTCTTGAGGTaGCGGACAGCCCGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: ILFRGKQVPEEACDKAGASFFLR*RTAREY
Trigger: GTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACT...AGCACCTGCCTTGTCACAGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp CGGGGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGTCTGGCGGGCAGTCCTaGGCAGCATCATTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: RGLINFGPVFGTLAGPAMSGGQS*AASFLS
Trigger: AGACAGAAATGATGCTGCCAAGGACTGCCCGCCAGA...CATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp CATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACAGGAGCCAACCTTCAATGACTaGCTGCTGATCCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: HALLAPDTFTAPALNPQEPTFND*LLILFR
Trigger: TCGGAAGAGGATCAGCAGCAAGTCATTGAAGGTTGG...CTCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CAA 90 bp CCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCATGAGACACACTCTCTaGGGAGCTGGAATCATGCCA +
Preference number: 5 (lower is better)
Translates to: PRVAREHFQMPVVLSGVTMRHTL*GAGIMP
Trigger: TGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCAT...GGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp GTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGATGAGACACACTCTCTaGGGAGCTGGAATCATGCCA +
Preference number: 5 (lower is better)
Translates to: VSSLCSCPSAPNPSPSEGMRHTL*GAGIMP
Trigger: TGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCAT...CCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp CATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACAGGAGTTGGGTTTCTTCTTTTaGGACATGGGACGACCCCGA +
Preference number: 5 (lower is better)
Translates to: HALLAPDTFTAPALNPQELGFFF*DMGRPR
Trigger: TCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCAA...CTCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CAA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGTCGAATGTGTCTTCTTaGTGCTCCTGCCCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLSNVSS*CSCPSA
Trigger: TGCTGACGGGCAGGAGCACAAAGAAGACACATTCGA...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR CAA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTCCTGGGCCCTTCTTTTaGGACATGGGACGACCCCGA +
Preference number: 5 (lower is better)
Translates to: QARDSKAPRVAREHFQMPPGPFF*DMGRPR
Trigger: TCGGGGTCGTCCCATGTCCAAAAAGAAGGGCCCAGG...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593795.5
CDS-3UTR CAA 90 bp GAGGGCCCTGGTTACCTCGGAATGCCTTACCCAGCAGGAACTAAGCTCAGTATTGGTTCGCGGTCGTCCTaGGTTATCGTGAGCGTCCGC +
Preference number: 5 (lower is better)
Translates to: EGPGYLGMPYPAGTKLSIGSRSS*VIVSVR
Trigger: GCGGACGCTCACGATAACCAAGGACGACCGCGAACC...AATACTGAGCTTAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAGGGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR CAA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTACAGTCGCCCTTCCACTaGCATGATGGCAAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLQSPFH*HDGKAL
Trigger: GAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACTG...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS TCA 90 bp CTCTCTTGGGAGCTGGAATCATGCCAACCTTCAATGACTTGCTGCTaGTCCTCTTCCGAGGGAAGCAGGTACCTGAGGAGGCCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LSWELESCQPSMTCC*SSSEGSRYLRRPLG
Trigger: GCCCAGAGGCCTCCTCAGGTACCTGCTTCCCTCGGAAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCAAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000594773.5
CDS-3UTR CAA 90 bp GCTCTCCTGAGAACCCGTGGTGTCACCACCACCAGTGTGAAGGTTGTGCGGAGATGGATGGCCAAAGTCTaGTTCCCAAGAACCACGGAG +
Preference number: 5 (lower is better)
Translates to: ALLRTRGVTTTSVKVVRRWMAKV*FPRTTE
Trigger: CTCCGTGGTTCTTGGGAACAAGACTTTGGCCATCCA...TCTCCGCACAACCTTCACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTAACCTCTGGCCTGGACTaGACTGCCGCCCCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVTSGLD*TAAPKH
Trigger: GTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGGT...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp ACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTCCGGCAGAGAGAGTaGGTGGTTTCTAGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: TKPYLGTGSRPIQGRDDVFRQRE*VVSRAR
Trigger: TCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGAA...AACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGGAAGGAGTTTCTTCTaGAGGTTGCGGACAGCCCGG +
Preference number: 5 (lower is better)
Translates to: QARDSKAPRVAREHFQMPGRSFF*RLRTAR
Trigger: CCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCC...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCCTGGCAGGGATGGTTTaGCCTGTGAGAGGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SSDGNKPETVKHPEWRESLAGMV*PVRGLE
Trigger: CTCCAGGCCTCTCACAGGCAAAACCATCCCTGCCAG...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp GCCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACTGGCAGGGATGGTTTaGCCTGTGAGAGGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: ASETSAPETAETFVFMYTLAGMV*PVRGLE
Trigger: CTCCAGGCCTCTCACAGGCAAAACCATCCCTGCCAG...TGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTCCAACCTTCAATGACTaGCTGCTGATCCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: QSGERALPDACCPLGGDPPTFND*LLILFR
Trigger: TCGGAAGAGGATCAGCAGCAAGTCATTGAAGGTTGG...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp AGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGCCAACCTTCAATGACTaGCTGCTGATCCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: RVAREHFQMPVVLSGVTLPTFND*LLILFR
Trigger: TCGGAAGAGGATCAGCAGCAAGTCATTGAAGGTTGG...CAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGATTGGGTTTCTTCTTTTaGGACATGGGACGACCCCGA +
Preference number: 5 (lower is better)
Translates to: SGERALPDACCPLGGDPGLGFFF*DMGRPR
Trigger: TCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCAA...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp CCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGAAGGAGATGTGCCCTTaGACCCCTGCCAAGGACTCA +
Preference number: 5 (lower is better)
Translates to: PAKDSQNHLSSNLEERQEKEMCP*TPAKDS
Trigger: TGAGTCCTTGGCAGGGGTCAAAGGGCACATCTCCTT...CTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CAA 90 bp TCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGAAAGACACTGTGACTTaGACACGGCTGTGCCACCAC +
Preference number: 5 (lower is better)
Translates to: SCTHQTVLGHWLQADPGQKDTVT*TRLCHH
Trigger: GTGGTGGCACAGCCGTGTCAAAGTCACAGTGTCTTT...CTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CAA 90 bp TGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACTGGAACAAACCGTACTaGGGCACTGGCTCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: CRNTSNVSSLCSCPSAPNWNKPY*GTGSRP
Trigger: CGGCCTGGAGCCAGTGCCCAAGTACGGTTTGTTCCA...GTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593795.5
CDS-3UTR CAA 90 bp TACAGCCAATACAAGTGGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTAGCCCAGTCGCCCTTCCACTaGCATGATGGCAAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: YSQYKWHFPLSSVADALAQSPFH*HDGKAL
Trigger: GAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACTG...GGCTAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS CCA 90 bp TCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACACACTaGCCTGTGAACATACCTATTTGTTGGCCCGCTTGTGTCTGTACA +
Preference number: 5 (lower is better)
Translates to: SLHTSTPARADGLTH*PVNIPICWPACVCT
Trigger: TGTACAGACACAAGCGGGCCAACAAATAGGTATGTTCACAGGCCAGTGTGTAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GCCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACTTCTGTCCCTGGGTTaGTCCCCAGGGTCACATCAG +
Preference number: 5 (lower is better)
Translates to: ASETSAPETAETFVFMYTLLSLG*SPGSHQ
Trigger: CTGATGTGACCCTGGGGACAAACCCAGGGACAGAAG...TGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CTGCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCTGGAATCCTGCCCATTaGATTATTTCTATCCCAAAT +
Preference number: 5 (lower is better)
Translates to: LPAAYTLTGSLMPFPREPWNPAH*IISIPN
Trigger: ATTTGGGATAGAAATAATCAAATGGGCAGGATTCCA...GGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp CTGCCTGCTGCGTACACGCTGACCGGCTCCCTGATGCCCTTTCCGAGGGAGCCCGTCTTCACAGCACCTTaGTCTAAAAGCATGTTTAAA +
Preference number: 5 (lower is better)
Translates to: LPAAYTLTGSLMPFPREPVFTAP*SKSMFK
Trigger: TTTAAACATGCTTTTAGACAAAGGTGCTGTGAAGAC...GGGCTCCCTCGGAAAGGGCATCAGGGAGCCGGTCAGCGTGTACGCAGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCGGAAGGAGTTTCTTCTaGAGGTTGCGGACAGCCCGG +
Preference number: 5 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVGRSFF*RLRTAR
Trigger: CCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCC...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp TTTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATCTGGCAGGGATGGTTTaGCCTGTGAGAGGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: FWTWDDPEACHRQFELVHLAGMV*PVRGLE
Trigger: CTCCAGGCCTCTCACAGGCAAAACCATCCCTGCCAG...ATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp GCTCTCCTGAGAACCCGTGGTGTCACCACCACCAGTGTGAAGGTTGTGCGGAGAATGAGACACACTCTCTaGGGAGCTGGAATCATGCCA +
Preference number: 5 (lower is better)
Translates to: ALLRTRGVTTTSVKVVRRMRHTL*GAGIMP
Trigger: TGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCAT...TCTCCGCACAACCTTCACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGATATTTGTTGGCCCGCTaGTGTCTGTACATCTGCATC +
Preference number: 5 (lower is better)
Translates to: SGERALPDACCPLGGDPGYLLAR*CLYICI
Trigger: GATGCAGATGTACAGACACAAGCGGGCCAACAAATA...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR CAA 90 bp GTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCCGAGGGGGTGTTTTGATCTATTTGTaGGCCCGCTTGTGTCTGTAC +
Preference number: 5 (lower is better)
Translates to: VFFVLLPVSTQPFPFRGGVLIYL*ARLCLY
Trigger: GTACAGACACAAGCGGGCCAACAAATAGATCAAAAC...ACCCCCTCGGAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGACACACCAAACCGTACTaGGGCACTGGCTCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: VISSDGNKPETVKHPEWRHTKPY*GTGSRP
Trigger: CGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTG...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CAA 90 bp ATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCCACACCAAACCGTACTaGGGCACTGGCTCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: MGSREWESSSRRKLHRNTHTKPY*GTGSRP
Trigger: CGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTG...GGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CAA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGTGGGCTGAGCCCCGCTaGGAGCTCCATCCATTCACC +
Preference number: 5 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRWAEPR*ELHPFT
Trigger: GGTGAATGGATGGAGCTCCAAGCGGGGCTCAGCCCA...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS TCA 90 bp ATACCAGCACGCCAGCGAGGGCAGACGGCCTTACACACTGGCCTGTaGACATACCTATTTGTTGGCCCGCTTGTGTCTGTACATCTGCAT +
Preference number: 5 (lower is better)
Translates to: IPARQRGQTALHTGL*TYLFVGPLVSVHLH
Trigger: ATGCAGATGTACAGACACAAGCGGGCCAACAAATAGGTATGTTCACAGGCCAGTGTGTAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS CCA 90 bp GGAGCCGAAGATTCTTCAGATCCAGCCCCAGAGGGATCTTCTGAATaGGGAACTGGATATCTTCTGTCCCTGGGTTTGTCCCCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: GAEDSSDPAPEGSSE*GTGYLLSLGLSPGS
Trigger: TGACCCTGGGGACAAACCCAGGGACAGAAGATATCCAGTTCCCCATTCAGAAGATCCCTCTGGGGCTGGATCTGAAGAATCTTCGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGTCTCTGCTCTGGATCTaGGGACTGCCCTTAAGAGAT +
Preference number: 5 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRSLLWI*GLPLRD
Trigger: ATCTCTTAAGGGCAGTCCCAAGATCCAGAGCAGAGA...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp CAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTTGGATGGCCAAAGTCTaGTTCCCAAGAACCACGGAG +
Preference number: 5 (lower is better)
Translates to: QARDSKAPRVAREHFQMPWMAKV*FPRTTE
Trigger: CTCCGTGGTTCTTGGGAACAAGACTTTGGCCATCCA...AGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGTGGATGGCCAAAGTCTaGTTCCCAAGAACCACGGAG +
Preference number: 5 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSWMAKV*FPRTTE
Trigger: CTCCGTGGTTCTTGGGAACAAGACTTTGGCCATCCA...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTGGATGGCCAAAGTCTaGTTCCCAAGAACCACGGAG +
Preference number: 5 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSWMAKV*FPRTTE
Trigger: CTCCGTGGTTCTTGGGAACAAGACTTTGGCCATCCA...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp TTGACCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGTTCCGGCAGAGAGAGTaGGTGGTTTCTAGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: LTPAKDSQNHLSSNLEERFRQRE*VVSRAR
Trigger: TCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGAA...CCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CAA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGTGGAGTCTTCGAAGTTaGGAAACGCAGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSWSLRS*ETQQVR
Trigger: CCTCACCTGCTGCGTTTCCAAACTTCGAAGACTCCA...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGAAGTTTCTTCTTGAGGTaGCGGACAGCCCGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: GNKPETVKHPEWRESTSRSFFLR*RTAREY
Trigger: GTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACT...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGACTGGCAGGGATGGTTTaGCCTGTGAGAGGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: VISSDGNKPETVKHPEWRLAGMV*PVRGLE
Trigger: CTCCAGGCCTCTCACAGGCAAAACCATCCCTGCCAG...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCTGGCAGGGATGGTTTaGCCTGTGAGAGGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRLAGMV*PVRGLE
Trigger: CTCCAGGCCTCTCACAGGCAAAACCATCCCTGCCAG...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATCTGGCGGGCAGTCCTaGGCAGCATCATTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: GNKPETVKHPEWRESTSRSGGQS*AASFLS
Trigger: AGACAGAAATGATGCTGCCAAGGACTGCCCGCCAGA...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp GGCTGGCCCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTTCTCTGCAGTCTCCATaGTCTTCATGTCAATGTCAG +
Preference number: 5 (lower is better)
Translates to: GWPGYGFPGMGKQFQTETSLQSP*SSCQCQ
Trigger: CTGACATTGACATGAAGACAATGGAGACTGCAGAGA...AGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGGGCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp CAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGTTTTCTATGCTGAATaGTTCGATCTCTGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: QSGERALPDACCPLGGDPVFYAE*FDLWSH
Trigger: GTGGGACCAGAGATCGAACAATTCAGCATAGAAAAC...AGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp TGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTATTGGGTTTCTTCTTTTaGGACATGGGACGACCCCGA +
Preference number: 5 (lower is better)
Translates to: CWGKFLCIPARQRGQTALLGFFF*DMGRPR
Trigger: TCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCAA...TAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGTCGAATGTGTCTTCTTaGTGCTCCTGCCCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: WRIEWSYTQQSAGESGERSNVSS*CSCPSA
Trigger: TGCTGACGGGCAGGAGCACAAAGAAGACACATTCGA...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CAA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTATCGAATGTGTCTTCTTaGTGCTCCTGCCCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLSNVSS*CSCPSA
Trigger: TGCTGACGGGCAGGAGCACAAAGAAGACACATTCGA...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp ACATGCTCTGCTGGCTCCCGACACCTTCACTGCCCCAGCGCTGAATCCACAGGAGCATTTAACTATTTGTaGGCCCGCTTGTGTCTGTAC +
Preference number: 5 (lower is better)
Translates to: TCSAGSRHLHCPSAESTGAFNYL*ARLCLY
Trigger: GTACAGACACAAGCGGGCCAACAAATAGTTAAATGC...TCCTGTGGATTCAGCGCTGGGGCAGTGAAGGTGTCGGGAGCCAGCAGAGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR CAA 90 bp TGCCTTTCGGGGGCAGCGCCACCTTCTGAAGGGGAACCAAGACAGATTTGGAGGGTTTCCACATCACGTTaGCTAACAGAGCACTTCTGG +
Preference number: 5 (lower is better)
Translates to: CLSGAAPPSEGEPRQIWRVSTSR*LTEHFW
Trigger: CCAGAAGTGCTCTGTTAGCAAACGTGATGTGGAAAC...CCTCCAAATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCCCCCGAAAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GGAACATCAACTTTGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGCATGCGCATCTGCCCTaGGCCAGTGTGAGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: GTSTLLGEISLHTSTPARHAHLP*ASVRFA
Trigger: AGCAAACCTCACACTGGCCAAGGGCAGATGCGCATG...CCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACAAAGTTGATGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS TCA 90 bp GGAAATACGTCACTTCTCAGGCCTTCTCTTCCGGCATCTCTAGAGTaGGCTACAGATCCACTGAGGGAGTATCTGCCATCGCTGTGGACG +
Preference number: 5 (lower is better)
Translates to: GNTSLLRPSLPASLE*ATDPLREYLPSLWT
Trigger: CGTCCACAGCGATGGCAGATACTCCCTCAGTGGATCTGTAGCTCACTCTAGAGATGCCGGAAGAGAAGGCCTGAGAAGTGACGTATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594445.1
ENST00000594773.5
ENST00000598202.1
ENST00000598240.1
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS TCA 90 bp CCAAAGTCTTGTTCCCAAGAACCACGGAGCGCAAATTTCCAGTCCTaGGAACGGAAATGCCCCAATTTCCGGTGGCCAATGACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: PKSCSQEPRSANFQS*ERKCPNFRWPMTWS
Trigger: GGACCAGGTCATTGGCCACCGGAAATTGGGGCATTTCCGTTCTCAGGACTGGAAATTTGCGCTCCGTGGTTCTTGGGAACAAGACTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
ENST00000598202.1
ENST00000598240.1
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGTCACTGATGGAAGGGTaGCTTGATCTGAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSSLMEG*LDLKEG
Trigger: GCCTTCCTTCAGATCAAGCAACCCTTCCATCAGTGA...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp CCGGCTATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGATCACTGATGGAAGGGTaGCTTGATCTGAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: PAMGSREWESSSRRKLHRSLMEG*LDLKEG
Trigger: GCCTTCCTTCAGATCAAGCAACCCTTCCATCAGTGA...TCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCATAGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp GGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCATCACTGATGGAAGGGTaGCTTGATCTGAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: GSRPIQGRDDVLRAIAASSLMEG*LDLKEG
Trigger: GCCTTCCTTCAGATCAAGCAACCCTTCCATCAGTGA...TGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCTGGATGGCCAAAGTCTaGTTCCCAAGAACCACGGAG +
Preference number: 5 (lower is better)
Translates to: RCHTCEKCRVSEGLQPPSWMAKV*FPRTTE
Trigger: CTCCGTGGTTCTTGGGAACAAGACTTTGGCCATCCA...GGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGGGGTCACATCAGGACTaGGAGTGTTTTTCTGGATTT +
Preference number: 5 (lower is better)
Translates to: PLPRTHRTISAQTWRSGRGSHQD*ECFSGF
Trigger: AAATCCAGAAAAACACTCCAAGTCCTGATGTGACCC...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CAA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCTTCTGTCCCTGGGTTaGTCCCCAGGGTCACATCAG +
Preference number: 5 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRLLSLG*SPGSHQ
Trigger: CTGATGTGACCCTGGGGACAAACCCAGGGACAGAAG...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGACTTCAGAAGCCGGTCTaGAAGTCTCATTATGTACTT +
Preference number: 5 (lower is better)
Translates to: SGERALPDACCPLGGDPGLQKPV*KSHYVL
Trigger: AAGTACATAATGAGACTTCAAGACCGGCTTCTGAAG...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp GCCAGTCCAACTGGAAAATCAGCCAGAGGAGCTGGTTCCTCAGCACTCACAGGCCATCACTCAGACTACTaGGAGCCTTGGCCTGAATTT +
Preference number: 5 (lower is better)
Translates to: ASPTGKSARGAGSSALTGHHSDY*EPWPEF
Trigger: AAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGATG...GCCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGATTTTCCAGTTGGACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GAAAATGTCTGTCCCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTGGTGGTTGGAAGGAGTTTCTTCTaGAGGTTGCGGACAGCCCGG +
Preference number: 5 (lower is better)
Translates to: ENVCPKRAKDFRQRELVVGRSFF*RLRTAR
Trigger: CCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCC...AACCACCAACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CAA 90 bp GTGAGAGAAAACTTGAGCAAGAGAAGAGACAGGCGTGGCCTATTTCCACACGCAGGAAGGAGTTTCTTCTaGAGGTTGCGGACAGCCCGG +
Preference number: 5 (lower is better)
Translates to: VRENLSKRRDRRGLFPHAGRSFF*RLRTAR
Trigger: CCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCC...TGCGTGTGGAAATAGGCCACGCCTGTCTCTTCTCTTGCTCAAGTTTTCTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTGGAAGGAGTTTCTTCTaGAGGTTGCGGACAGCCCGG +
Preference number: 5 (lower is better)
Translates to: YGNCSESFRALVPECRLGGRSFF*RLRTAR
Trigger: CCGGGCTGTCCGCAACCTCAAGAAGAAACTCCTTCC...ACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGTCTGGCGGGCAGTCCTaGGCAGCATCATTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: NRALLESNGQSNWKISQRSGGQS*AASFLS
Trigger: AGACAGAAATGATGCTGCCAAGGACTGCCCGCCAGA...CCTCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CTGGGGAATCTGGAGAGCGGGGGCGATCACATGCCTGGAAATAGAGCAGCTGCATCTCTGCAGTCTCCATaGTCTTCATGTCAATGTCAG +
Preference number: 5 (lower is better)
Translates to: LGNLESGGDHMPGNRAAASLQSP*SSCQCQ
Trigger: CTGACATTGACATGAAGACAATGGAGACTGCAGAGA...TGCAGCTGCTCTATTTCCAGGCATGTGATCGCCCCCGCTCTCCAGATTCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CAA 90 bp GCCTGTTGTCCTCTCGGGGGTGACCCTGGAACTAGAACGACAGAAAAGACACTGCCAACCTTCAATGACTaGCTGCTGATCCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: ACCPLGGDPGTRTTEKTLPTFND*LLILFR
Trigger: TCGGAAGAGGATCAGCAGCAAGTCATTGAAGGTTGG...CAGTGTCTTTTCTGTCGTTCTAGTTCCAGGGTCACCCCCGAGAGGACAACAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CAA 90 bp CGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTCCAACCTTCAATGACTaGCTGCTGATCCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: RNTSNVSSLCSCPSAPNPPTFND*LLILFR
Trigger: TCGGAAGAGGATCAGCAGCAAGTCATTGAAGGTTGG...AGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGTTGGGTTTCTTCTTTTaGGACATGGGACGACCCCGA +
Preference number: 5 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGLGFFF*DMGRPR
Trigger: TCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCAA...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATCGAATGTGTCTTCTTaGTGCTCCTGCCCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: GNKPETVKHPEWRESTSRSNVSS*CSCPSA
Trigger: TGCTGACGGGCAGGAGCACAAAGAAGACACATTCGA...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR CAA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCCCTGGAACTATTTGTaGGCCCGCTTGTGTCTGTAC +
Preference number: 5 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVPWNYL*ARLCLY
Trigger: GTACAGACACAAGCGGGCCAACAAATAGTTCCAGGG...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337018.10
CDS-3UTR CAA 90 bp CTCTCGGGGGTGACCCTGGAACTAGAACGACAGAAAAGACACTGTGACTTTGACAAGGAGATGTGCCCTTaGACCCCTGCCAAGGACTCA +
Preference number: 5 (lower is better)
Translates to: LSGVTLELERQKRHCDFDKEMCP*TPAKDS
Trigger: TGAGTCCTTGGCAGGGGTCAAAGGGCACATCTCCTT...GTCAAAGTCACAGTGTCTTTTCTGTCGTTCTAGTTCCAGGGTCACCCCCGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CAA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGTTCATGGACTGGGGCTaGGAAAACAGTCAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGFMDWG*ENSQWL
Trigger: CAACCACTGACTGTTTTCCAAGCCCCAGTCCATGAA...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS TCA 90 bp ATTTCCAGTCCTGAGAACGGAAATGCCCCAATTTCCGGTGGCCAATaGCCTGGTCCCGAGAATCAGAGTGAGAAAATTCCAGATCCCGGC +
Preference number: 5 (lower is better)
Translates to: ISSPENGNAPISGGQ*PGPENQSEKIPDPG
Trigger: GCCGGGATCTGGAATTTTCTCACTCTGATTCTCGGGACCAGGTCATTGGCCACCGGAAATTGGGGCATTTCCGTTCTCAGGACTGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
ENST00000598202.1
ENST00000598240.1
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS CCA 90 bp AGGGCAGACGGCCTTACACACTGGCCTGTGAACATACCTATTTGTTaGCCCGCTTGTGTCTGTACATCTGCATCATCCTCTGTCGGAACA +
Preference number: 5 (lower is better)
Translates to: RADGLTHWPVNIPIC*PACVCTSASSSVGT
Trigger: TGTTCCGACAGAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGGTATGTTCACAGGCCAGTGTGTAAGGCCGTCTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCTCTCTGCTCTGGATCTaGGGACTGCCCTTAAGAGAT +
Preference number: 5 (lower is better)
Translates to: SSDGNKPETVKHPEWRESSLLWI*GLPLRD
Trigger: ATCTCTTAAGGGCAGTCCCAAGATCCAGAGCAGAGA...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp ACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGAGTGTTTTTCTGGATTaGGTTAGTGCCCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: TPNRTWALAPGRSRAGMMSVFLD*VSALSF
Trigger: AAAACTCAGGGCACTAACCAAATCCAGAAAAACACT...CATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GCCAGTCCAACTGGAAAATCAGCCAGAGGAGCTGGTTCCTCAGCACTCACAGGCGGGTCACATCAGGACTaGGAGTGTTTTTCTGGATTT +
Preference number: 5 (lower is better)
Translates to: ASPTGKSARGAGSSALTGGSHQD*ECFSGF
Trigger: AAATCCAGAAAAACACTCCAAGTCCTGATGTGACCC...GCCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGATTTTCCAGTTGGACTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAATTGGGCACTGGCTCCAGGTGGAATCCTGCCCATTaGATTATTTCTATCCCAAAT +
Preference number: 5 (lower is better)
Translates to: QMPVVLSGVTLELGTGSRWNPAH*IISIPN
Trigger: ATTTGGGATAGAAATAATCAAATGGGCAGGATTCCA...CCTGGAGCCAGTGCCCAATTCCAGGGTCACCCCCGAGAGGACAACAGGCATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR CAA 90 bp TGCCTTTCGGGGGCAGCGCCACCTTCTGAAGGGGAACCAAGACAGATTTGGAGGCTTCAGAAGCCGGTCTaGAAGTCTCATTATGTACTT +
Preference number: 5 (lower is better)
Translates to: CLSGAAPPSEGEPRQIWRLQKPV*KSHYVL
Trigger: AAGTACATAATGAGACTTCAAGACCGGCTTCTGAAG...CCTCCAAATCTGTCTTGGTTCCCCTTCAGAAGGTGGCGCTGCCCCCGAAAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCATCACTCAGACTACTaGGAGCCTTGGCCTGAATTT +
Preference number: 5 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGHHSDY*EPWPEF
Trigger: AAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGATG...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAAGTTTCTTCTTGAGGTaGCGGACAGCCCGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: LTEHFWRAMASPTGKSARSFFLR*RTAREY
Trigger: GTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACT...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGAGTTTCTTCTTGAGGTaGCGGACAGCCCGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRSFFLR*RTAREY
Trigger: GTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACT...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGATCTGGCGGGCAGTCCTaGGCAGCATCATTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: LTEHFWRAMASPTGKSARSGGQS*AASFLS
Trigger: AGACAGAAATGATGCTGCCAAGGACTGCCCGCCAGA...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp ATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCTCTGGCGGGCAGTCCTaGGCAGCATCATTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: MGSREWESSSRRKLHRNTSGGQS*AASFLS
Trigger: AGACAGAAATGATGCTGCCAAGGACTGCCCGCCAGA...GGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp TGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTATCTCTGCAGTCTCCATaGTCTTCATGTCAATGTCAG +
Preference number: 5 (lower is better)
Translates to: CWGKFLCIPARQRGQTALSLQSP*SSCQCQ
Trigger: CTGACATTGACATGAAGACAATGGAGACTGCAGAGA...TAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GGTTTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTGTTTTCTATGCTGAATaGTTCGATCTCTGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: GLINFGPVFGTLAGPAMGVFYAE*FDLWSH
Trigger: GTGGGACCAGAGATCGAACAATTCAGCATAGAAAAC...ACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp GGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAGCGAAGTCCAAGTCCTaGGGTTTCTTCTTTTTGGAC +
Preference number: 5 (lower is better)
Translates to: GSRPIQGRDDVLRAIAASAKSKS*GFFFLD
Trigger: GTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGC...TGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGTCGAATGTGTCTTCTTaGTGCTCCTGCCCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: NRALLESNGQSNWKISQRSNVSS*CSCPSA
Trigger: TGCTGACGGGCAGGAGCACAAAGAAGACACATTCGA...CCTCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTATTTGTTGGCCCGCTaGTGTCTGTACATCTGCATC +
Preference number: 5 (lower is better)
Translates to: ETVKHPEWRESTSRCLLSYLLAR*CLYICI
Trigger: GATGCAGATGTACAGACACAAGCGGGCCAACAAATA...GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR CAA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTATATTTGTTGGCCCGCTaGTGTCTGTACATCTGCATC +
Preference number: 5 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLYLLAR*CLYICI
Trigger: GATGCAGATGTACAGACACAAGCGGGCCAACAAATA...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CCCCTGCCAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAAAGCATTTAACTATTaGTTGGCCCGCTTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: PLPRTHRTISAQTWRSGRKAFNY*LARLCL
Trigger: CAGACACAAGCGGGCCAACAAATAGTTAAATGCTTT...CCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTGGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR CAA 90 bp CCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCGTGGTTTTGATCTATTaGTTGGCCCGCTTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: PLSEHIECVFFVLLPVSTVVLIY*LARLCL
Trigger: CAGACACAAGCGGGCCAACAAATAGATCAAAACCAC...GGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp ATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCGTGGTTTTGATCTATTaGTTGGCCCGCTTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: IECVFFVLLPVSTQPFPFVVLIY*LARLCL
Trigger: CAGACACAAGCGGGCCAACAAATAGATCAAAACCAC...GAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp TTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTTCCTTCACATCAGTGGTTTaGATCTATTTGTTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: LINFGPVFGTLAGPAMGSFTSVV*IYLLAR
Trigger: GCGGGCCAACAAATAGATCAAAACCACTGATGTGAA...GGAACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CAA 90 bp TCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGAGACTGCAGAGACGTTaGTTTTCATGTACACACCAA +
Preference number: 5 (lower is better)
Translates to: SCTHQTVLGHWLQADPGQRLQRR*FSCTHQ
Trigger: TTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCT...CTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGATTTGGAGGGGACTaGCTGCTAAAAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: FHVHTKPYLGTGSRPIQGRFGGD*LLKACE
Trigger: TTCACATGCTTTTAGCAGCAAGTCCCCTCCAAATCT...GCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGAGGATGAGTGGAGAATaGAGTGGAGTTACACGCAGC +
Preference number: 5 (lower is better)
Translates to: FGHGTTPRPVIGNSNWFMRMSGE*SGVTRS
Trigger: GCTGCGTGTAACTCCACTCAATTCTCCACTCATCCT...CATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CAA 90 bp TGGAGAATTGAGTGGAGTTACACGCAGCAGAGTGCTGGGGAATCTGGAGAGCGGGAACATACCTATTTGTaGGCCCGCTTGTGTCTGTAC +
Preference number: 5 (lower is better)
Translates to: WRIEWSYTQQSAGESGEREHTYL*ARLCLY
Trigger: GTACAGACACAAGCGGGCCAACAAATAGGTATGTTC...CCGCTCTCCAGATTCCCCAGCACTCTGCTGCGTGTAACTCCACTCAATTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS-3UTR CAA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTACTAGGAACAGTCCGTTaGCTGGTCATGTTATGTGGT +
Preference number: 5 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLLGTVR*LVMLCG
Trigger: ACCACATAACATGACCAGCAAACGGACTGTTCCTAG...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GCCAGTCCAACTGGAAAATCAGCCAGAGGAGCTGGTTCCTCAGCACTCACAGGCCAGAAGGAAAAGGATTaGAAGACCCTCACAAAGGGA +
Preference number: 5 (lower is better)
Translates to: ASPTGKSARGAGSSALTGQKEKD*KTLTKG
Trigger: TCCCTTTGTGAGGGTCTTCAAATCCTTTTCCTTCTG...GCCTGTGAGTGCTGAGGAACCAGCTCCTCTGGCTGATTTTCCAGTTGGACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCTCTCTGCTCTGGATCTaGGGACTGCCCTTAAGAGAT +
Preference number: 5 (lower is better)
Translates to: HHPLSEHIECVFFVLLPVSLLWI*GLPLRD
Trigger: ATCTCTTAAGGGCAGTCCCAAGATCCAGAGCAGAGA...GACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CAA 90 bp ACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTGGAATCCTGCCCATTaGATTATTTCTATCCCAAAT +
Preference number: 5 (lower is better)
Translates to: TPNRTWALAPGRSRAGMMWNPAH*IISIPN
Trigger: ATTTGGGATAGAAATAATCAAATGGGCAGGATTCCA...CATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGGGTGACCCTGGAGTCTTCACAGCACCTTaGTCTAAAAGCATGTTTAAA +
Preference number: 5 (lower is better)
Translates to: SGERALPDACCPLGGDPGVFTAP*SKSMFK
Trigger: TTTAAACATGCTTTTAGACAAAGGTGCTGTGAAGAC...TCCAGGGTCACCCCCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp CCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTCCGGCAGAGAGAGTaGGTGGTTTCTAGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: PIQGRDDVLRAIAASRLIFRQRE*VVSRAR
Trigger: TCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGAA...GATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CAACTCAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCTTCCGGCAGAGAGAGTaGGTGGTTTCTAGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: QLKYGNCSESFRALVPECFRQRE*VVSRAR
Trigger: TCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGAA...GCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCATTCCGGCAGAGAGAGTaGGTGGTTTCTAGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: AETFVFMYTPNRTWALAPFRQRE*VVSRAR
Trigger: TCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGAA...TGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGTGGAGTCTTCGAAGTTaGGAAACGCAGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRWSLRS*ETQQVR
Trigger: CCTCACCTGCTGCGTTTCCAAACTTCGAAGACTCCA...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCCATCACTCAGACTACTaGGAGCCTTGGCCTGAATTT +
Preference number: 5 (lower is better)
Translates to: SSDGNKPETVKHPEWRESHHSDY*EPWPEF
Trigger: AAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGATG...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp TTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATGCATCACTCAGACTACTaGGAGCCTTGGCCTGAATTT +
Preference number: 5 (lower is better)
Translates to: FGHGTTPRPVIGNSNWFMHHSDY*EPWPEF
Trigger: AAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGATG...CATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTTCTGGCGGGCAGTCCTaGGCAGCATCATTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: ATVQRASELWYPSADLVISGGQS*AASFLS
Trigger: AGACAGAAATGATGCTGCCAAGGACTGCCCGCCAGA...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGTTTTCTATGCTGAATaGTTCGATCTCTGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSVFYAE*FDLWSH
Trigger: GTGGGACCAGAGATCGAACAATTCAGCATAGAAAAC...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTATGAGACACACTCTCTaGGGAGCTGGAATCATGCCA +
Preference number: 5 (lower is better)
Translates to: SDGNKPETVKHPEWRESTMRHTL*GAGIMP
Trigger: TGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCAT...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp TTTTGGACATGGGACGACCCCGAGGCCTGTCATAGGCAATTCGAACTGGTTCATTTGGGTTTCTTCTTTTaGGACATGGGACGACCCCGA +
Preference number: 5 (lower is better)
Translates to: FWTWDDPEACHRQFELVHLGFFF*DMGRPR
Trigger: TCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCAA...ATGAACCAGTTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000597280.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCGCGAAGTCCAAGTCCTaGGGTTTCTTCTTTTTGGAC +
Preference number: 5 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVAKSKS*GFFFLD
Trigger: GTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGC...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp AGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCTATTTGTTGGCCCGCTaGTGTCTGTACATCTGCATC +
Preference number: 5 (lower is better)
Translates to: RDSKAPRVAREHFQMPVVYLLAR*CLYICI
Trigger: GATGCAGATGTACAGACACAAGCGGGCCAACAAATA...GACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
CDS-3UTR CAA 90 bp ATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCTTCACATCAGTGGTTTaGATCTATTTGTTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: IECVFFVLLPVSTQPFPFFTSVV*IYLLAR
Trigger: GCGGGCCAACAAATAGATCAAAACCACTGATGTGAA...GAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp AAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGGATGATGTTTTATTCACATCAGTGGTTTaGATCTATTTGTTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: KPYLGTGSRPIQGRDDVLFTSVV*IYLLAR
Trigger: GCGGGCCAACAAATAGATCAAAACCACTGATGTGAA...TAAAACATCATCCCTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp GTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGGTAATTACCGGGAATTaGTCTCCCCCGTATAAATTC +
Preference number: 5 (lower is better)
Translates to: VKHPEWRESTSRCLLSSRVITGN*SPPYKF
Trigger: GAATTTATACGGGGGAGACAAATTCCCGGTAATTAC...CCGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CAA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGAGTAATAAGACAGCACTaGACGATGCCATACGTGCGA +
Preference number: 5 (lower is better)
Translates to: GNKPETVKHPEWRESTSRVIRQH*TMPYVR
Trigger: TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTAC...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CAA 90 bp TACAGCCAATACAAGTGGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTAGCCTGGTTCGTTCGAGGGTaGGGTTATAAACCCAAACTC +
Preference number: 5 (lower is better)
Translates to: YSQYKWHFPLSSVADALAWFVRG*GYKPKL
Trigger: GAGTTTGGGTTTATAACCCAACCCTCGAACGAACCA...GGCTAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CAA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCATGAGATGCAGGTGTTaGGGACACACACTGAGACAT +
Preference number: 5 (lower is better)
Translates to: SSDGNKPETVKHPEWRESMRCRC*GHTLRH
Trigger: ATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCAT...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS-3UTR CAA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTACCTCTGGCCTGGACTaGACTGCCGCCCCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: RDDVLRAIAASRLIFHISTSGLD*TAAPKH
Trigger: GTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGGT...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AGTCGCCCTTCCACTTGCATGATGGCAAGGCCCTCTGGACTAGGAACAGTCCGTAGTGTTTTTCTGGATTaGGTTAGTGCCCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: SRPSTCMMARPSGLGTVRSVFLD*VSALSF
Trigger: AAAACTCAGGGCACTAACCAAATCCAGAAAAACACT...ACGGACTGTTCCTAGTCCAGAGGGCCTTGCCATCATGCAAGTGGAAGGGCGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGCAGGTCTTCACAGCACCTTaGTCTAAAAGCATGTTTAAA +
Preference number: 5 (lower is better)
Translates to: SCTHQTVLGHWLQADPGQVFTAP*SKSMFK
Trigger: TTTAAACATGCTTTTAGACAAAGGTGCTGTGAAGAC...CTGCCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GCCTGTTGTCCTCTCGGGGGTGACCCTGGAACTAGAACGACAGAAAAGACACTGCTTCAGAAGCCGGTCTaGAAGTCTCATTATGTACTT +
Preference number: 5 (lower is better)
Translates to: ACCPLGGDPGTRTTEKTLLQKPV*KSHYVL
Trigger: AAGTACATAATGAGACTTCAAGACCGGCTTCTGAAG...CAGTGTCTTTTCTGTCGTTCTAGTTCCAGGGTCACCCCCGAGAGGACAACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CAA 90 bp CTGGAAGCCCAGGTTCTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTCTTCAGAAGCCGGTCTaGAAGTCTCATTATGTACTT +
Preference number: 5 (lower is better)
Translates to: LEAQVLIGQLLLGEVQVLLQKPV*KSHYVL
Trigger: AAGTACATAATGAGACTTCAAGACCGGCTTCTGAAG...AAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAGAACCTGGGCTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTTGGAGTCTTCGAAGTTaGGAAACGCAGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: ESFRALVPECRLGNYREFWSLRS*ETQQVR
Trigger: CCTCACCTGCTGCGTTTCCAAACTTCGAAGACTCCA...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp ACAGGAGAGGTGTCCTCTGAGAGTGTAGGGGGCTTTCTAGGTTCAAGGAGATGTCATCACTCAGACTACTaGGAGCCTTGGCCTGAATTT +
Preference number: 5 (lower is better)
Translates to: TGEVSSESVGGFLGSRRCHHSDY*EPWPEF
Trigger: AAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGATG...ACATCTCCTTGAACCTAGAAAGCCCCCTACACTCTCAGAGGACACCTCTCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CAA 90 bp AGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTCATCACTCAGACTACTaGGAGCCTTGGCCTGAATTT +
Preference number: 5 (lower is better)
Translates to: SDGNKPETVKHPEWRESTHHSDY*EPWPEF
Trigger: AAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGATG...AGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCATCACTCAGACTACTaGGAGCCTTGGCCTGAATTT +
Preference number: 5 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGHHSDY*EPWPEF
Trigger: AAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGATG...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCTCTCTGCAGTCTCCATaGTCTTCATGTCAATGTCAG +
Preference number: 5 (lower is better)
Translates to: SSDGNKPETVKHPEWRESSLQSP*SSCQCQ
Trigger: CTGACATTGACATGAAGACAATGGAGACTGCAGAGA...GCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp GGAACAGTCCGTTTGCTGGTCATGTTATGTGGTAGGTGGCTGTCATCTGTGAGACCAACCTTCAATGACTaGCTGCTGATCCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: GTVRLLVMLCGRWLSSVRPTFND*LLILFR
Trigger: TCGGAAGAGGATCAGCAGCAAGTCATTGAAGGTTGG...TCTCACAGATGACAGCCACCTACCACATAACATGACCAGCAAACGGACTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGATGAGACACACTCTCTaGGGAGCTGGAATCATGCCA +
Preference number: 5 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRMRHTL*GAGIMP
Trigger: TGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCAT...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCATGAGACACACTCTCTaGGGAGCTGGAATCATGCCA +
Preference number: 5 (lower is better)
Translates to: KPPPQRLQRRLFSCTHQTMRHTL*GAGIMP
Trigger: TGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCAT...GGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTATGAGACACACTCTCTaGGGAGCTGGAATCATGCCA +
Preference number: 5 (lower is better)
Translates to: QVWQLFRELQSFGTRVQTMRHTL*GAGIMP
Trigger: TGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCAT...AGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp ATGTCTGTCCCAAAAGGGCCAAAGACTTCCGGCAGAGAGAGTTGGTGGTTTCTATTGGGTTTCTTCTTTTaGGACATGGGACGACCCCGA +
Preference number: 5 (lower is better)
Translates to: MSVPKGPKTSGRESWWFLLGFFF*DMGRPR
Trigger: TCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCAA...TAGAAACCACCAACTCTCTCTGCCGGAAGTCTTTGGCCCTTTTGGGACAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CAA 90 bp ACAGGAGAGGTGTCCTCTGAGAGTGTAGGGGGCTTTCTAGGTTCAAGGAGATGTGCGAAGTCCAAGTCCTaGGGTTTCTTCTTTTTGGAC +
Preference number: 5 (lower is better)
Translates to: TGEVSSESVGGFLGSRRCAKSKS*GFFFLD
Trigger: GTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGC...ACATCTCCTTGAACCTAGAAAGCCCCCTACACTCTCAGAGGACACCTCTCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CAA 90 bp GCGACTCACAGTAGAAACAAGGAGTACTCACCCTCGAAGAGCTGGCTTTTGAGGGCGAAGTCCAAGTCCTaGGGTTTCTTCTTTTTGGAC +
Preference number: 5 (lower is better)
Translates to: ATHSRNKEYSPSKSWLLRAKSKS*GFFFLD
Trigger: GTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGC...CCTCAAAAGCCAGCTCTTCGAGGGTGAGTACTCCTTGTTTCTACTGTGAGTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCGCGAAGTCCAAGTCCTaGGGTTTCTTCTTTTTGGAC +
Preference number: 5 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGAKSKS*GFFFLD
Trigger: GTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGC...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTTCGAATGTGTCTTCTTaGTGCTCCTGCCCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: ESFRALVPECRLGNYREFSNVSS*CSCPSA
Trigger: TGCTGACGGGCAGGAGCACAAAGAAGACACATTCGA...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGTATTTGTTGGCCCGCTaGTGTCTGTACATCTGCATC +
Preference number: 5 (lower is better)
Translates to: NRALLESNGQSNWKISQRYLLAR*CLYICI
Trigger: GATGCAGATGTACAGACACAAGCGGGCCAACAAATA...CCTCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCGTGGTTTTGATCTATTaGTTGGCCCGCTTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: HHPLSEHIECVFFVLLPVVVLIY*LARLCL
Trigger: CAGACACAAGCGGGCCAACAAATAGATCAAAACCAC...GACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp ATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCACCCAACCCTTCCCCTTCAGACTGCAGAGACGTTaGTTTTCATGTACACACCAA +
Preference number: 5 (lower is better)
Translates to: IECVFFVLLPVSTQPFPFRLQRR*FSCTHQ
Trigger: TTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCT...GAAGGGGAAGGGTTGGGTGCTGACGGGCAGGAGCACAAAGAAGACACATTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp GCTCTCCTGAGAACCCGTGGTGTCACCACCACCAGTGTGAAGGTTGTGCGGAGAAGAGGCAAAAGCACATaGAAAATGGTGCATGTTTTT +
Preference number: 5 (lower is better)
Translates to: ALLRTRGVTTTSVKVVRRRGKST*KMVHVF
Trigger: AAAAACATGCACCATTTTCAATGTGCTTTTGCCTCT...TCTCCGCACAACCTTCACACTGGTGGTGGTGACACCACGGGTTCTCAGGAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CAA 90 bp GTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGCAGACGGCCTTACAGAGGCAAAAGCACATaGAAAATGGTGCATGTTTTT +
Preference number: 5 (lower is better)
Translates to: VGGNFSAYQHASEGRRPYRGKST*KMVHVF
Trigger: AAAAACATGCACCATTTTCAATGTGCTTTTGCCTCT...GTAAGGCCGTCTGCCCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTATACCCGAGTGCAGACTaGGTAATTACCGGGAATTTG +
Preference number: 5 (lower is better)
Translates to: PPPQRLQRRLFSCTHQTVYPSAD*VITGNL
Trigger: CAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTA...TACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGGTAATAAGACAGCACTaGACGATGCCATACGTGCGA +
Preference number: 5 (lower is better)
Translates to: NRALLESNGQSNWKISQRVIRQH*TMPYVR
Trigger: TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTAC...CCTCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTAGGATGAGTGGAGAATaGAGTGGAGTTACACGCAGC +
Preference number: 5 (lower is better)
Translates to: QVWQLFRELQSFGTRVQTRMSGE*SGVTRS
Trigger: GCTGCGTGTAACTCCACTCAATTCTCCACTCATCCT...AGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CAA 90 bp AACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGGAACATACCTATTTGTaGGCCCGCTTGTGTCTGTAC +
Preference number: 5 (lower is better)
Translates to: NRALLESNGQSNWKISQREHTYL*ARLCLY
Trigger: GTACAGACACAAGCGGGCCAACAAATAGGTATGTTC...CCTCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTGTGTGGCATTTTaGGGGGAGCAGGGAACATCA +
Preference number: 5 (lower is better)
Translates to: QRASELWYPSADLVITGNLCVAF*GEQGTS
Trigger: TGATGTTCCCTGCTCCCCCAAAAATGCCACACACAA...ATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTCATGCGCATCTGCCCTaGGCCAGTGTGAGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: PYKGCNKTALDDAIRAKSHAHLP*ASVRFA
Trigger: AGCAAACCTCACACTGGCCAAGGGCAGATGCGCATG...ACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CTTATCGGTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTTCTCTGCTCTGGATCTaGGGACTGCCCTTAAGAGAT +
Preference number: 5 (lower is better)
Translates to: LIGQLLLGEVQVLGFLLFSLLWI*GLPLRD
Trigger: ATCTCTTAAGGGCAGTCCCAAGATCCAGAGCAGAGA...AAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGACCGATAAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp CCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGATCACTGATGGAAGGGTaGCTTGATCTGAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: PLLTKAVIRQHLTMPYVRSLMEG*LDLKEG
Trigger: GCCTTCCTTCAGATCAAGCAACCCTTCCATCAGTGA...TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CAAGGACTCACAGAACCATCTCAGCTCAAACTTGGAGGAGCGGCAGGAGGTGGGTGGAATCCTGCCCATTaGATTATTTCTATCCCAAAT +
Preference number: 5 (lower is better)
Translates to: QGLTEPSQLKLGGAAGGGWNPAH*IISIPN
Trigger: ATTTGGGATAGAAATAATCAAATGGGCAGGATTCCA...CCCACCTCCTGCCGCTCCTCCAAGTTTGAGCTGAGATGGTTCTGTGAGTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CAA 90 bp GGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGACTTCAGAAGCCGGTCTaGAAGTCTCATTATGTACTT +
Preference number: 5 (lower is better)
Translates to: GNKPETVKHPEWRESTSRLQKPV*KSHYVL
Trigger: AAGTACATAATGAGACTTCAAGACCGGCTTCTGAAG...TCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp CAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATCATCACTCAGACTACTaGGAGCCTTGGCCTGAATTT +
Preference number: 5 (lower is better)
Translates to: QRASELWYPSADLVITGNHHSDY*EPWPEF
Trigger: AAATTCAGGCCAAGGCTCCAAGTAGTCTGAGTGATG...ATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCTCTCTGCAGTCTCCATaGTCTTCATGTCAATGTCAG +
Preference number: 5 (lower is better)
Translates to: HHPLSEHIECVFFVLLPVSLQSP*SSCQCQ
Trigger: CTGACATTGACATGAAGACAATGGAGACTGCAGAGA...GACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CAA 90 bp CATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCGTTTTCTATGCTGAATaGTTCGATCTCTGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: HHPLSEHIECVFFVLLPVVFYAE*FDLWSH
Trigger: GTGGGACCAGAGATCGAACAATTCAGCATAGAAAAC...GACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CAA 90 bp TCTGCATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCGCGAAGTCCAAGTCCTaGGGTTTCTTCTTTTTGGAC +
Preference number: 5 (lower is better)
Translates to: SASSSVGTHRMCLLCAPAAKSKS*GFFFLD
Trigger: GTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGC...GGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp CTCTTGGGAGCTGGAATCATGCCAACCTTCAATGACTTGCTGCTGATCCTCTTCGCGAAGTCCAAGTCCTaGGGTTTCTTCTTTTTGGAC +
Preference number: 5 (lower is better)
Translates to: LLGAGIMPTFNDLLLILFAKSKS*GFFFLD
Trigger: GTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGC...GAAGAGGATCAGCAGCAAGTCATTGAAGGTTGGCATGATTCCAGCTCCCAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGTATTTGTTGGCCCGCTaGTGTCTGTACATCTGCATC +
Preference number: 5 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRYLLAR*CLYICI
Trigger: GATGCAGATGTACAGACACAAGCGGGCCAACAAATA...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGGTGGTTTTGATCTATTaGTTGGCCCGCTTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRVVLIY*LARLCL
Trigger: CAGACACAAGCGGGCCAACAAATAGATCAAAACCAC...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp TTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGGACGAGTGGTTTTGATCTATTaGTTGGCCCGCTTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: FCWAKSKSLGFFFLDMGRVVLIY*LARLCL
Trigger: CAGACACAAGCGGGCCAACAAATAGATCAAAACCAC...TCGTCCCATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp CAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGGGTTCACATCAGTGGTTTaGATCTATTTGTTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: QLLLGEVQVLGFLLFGHGFTSVV*IYLLAR
Trigger: GCGGGCCAACAAATAGATCAAAACCACTGATGTGAA...CCCATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp CCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTCATTAAGTCTCTCACACACCAAACCGTACTaGGGCACTGGCTCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: PHPIELFYTVAKISLSLSHTKPY*GTGSRP
Trigger: CGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTG...TGAGAGACTTAATGAAATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp ATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGCTCCTGCCCGTCAGCAAGATTTGGAGGGGACTaGCTGCTAAAAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: ILCRNTSNVSSLCSCPSARFGGD*LLKACE
Trigger: TTCACATGCTTTTAGCAGCAAGTCCCCTCCAAATCT...TGCTGACGGGCAGGAGCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp ACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACGTTTCCACATCACGTTaGCTAACAGAGCACTTCTGG +
Preference number: 5 (lower is better)
Translates to: TALDDAIRAKSAESQRVYVSTSR*LTEHFW
Trigger: CCAGAAGTGCTCTGTTAGCAAACGTGATGTGGAAAC...GTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGTTTCCACATCACGTTaGCTAACAGAGCACTTCTGG +
Preference number: 5 (lower is better)
Translates to: APETAETFVFMYTPNRTWVSTSR*LTEHFW
Trigger: CCAGAAGTGCTCTGTTAGCAAACGTGATGTGGAAAC...CCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TTAATAAACTTTGGGCCTGTGTTCGGGACCCTGGCTGGCCCGGCTATGGGTTCCCTTTGTAACTGTAGTTaGCTTACACTGTGGATTCTA +
Preference number: 5 (lower is better)
Translates to: LINFGPVFGTLAGPAMGSLCNCS*LTLWIL
Trigger: TAGAATCCACAGTGTAAGCAAACTACAGTTACAAAG...GGAACCCATAGCCGGGCCAGCCAGGGTCCCGAACACAGGCCCAAAGTTTATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CAA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTGTAATAAGACAGCACTaGACGATGCCATACGTGCGA +
Preference number: 5 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCVIRQH*TMPYVR
Trigger: TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTAC...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTAGGATGAGTGGAGAATaGAGTGGAGTTACACGCAGC +
Preference number: 5 (lower is better)
Translates to: ATVQRASELWYPSADLVIRMSGE*SGVTRS
Trigger: GCTGCGTGTAACTCCACTCAATTCTCCACTCATCCT...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CAA 90 bp CCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGATTCATGGACTGGGGCTaGGAAAACAGTCAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: PLLTKAVIRQHLTMPYVRFMDWG*ENSQWL
Trigger: CAACCACTGACTGTTTTCCAAGCCCCAGTCCATGAA...TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CAA 90 bp AAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACACCAAACCTGTGAACATACCTATTaGTTGGCCCGCTTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: KPPPQRLQRRLFSCTHQTCEHTY*LARLCL
Trigger: CAGACACAAGCGGGCCAACAAATAGGTATGTTCACA...GGTTTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GTGAGAGAAAACTTGAGCAAGAGAAGAGACAGGCGTGGCCTATTTCCACACGCATGTGAACATACCTATTaGTTGGCCCGCTTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: VRENLSKRRDRRGLFPHACEHTY*LARLCL
Trigger: CAGACACAAGCGGGCCAACAAATAGGTATGTTCACA...TGCGTGTGGAAATAGGCCACGCCTGTCTCTTCTCTTGCTCAAGTTTTCTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS GCA 90 bp GCCTGTGAACATACCTATTTGTTGGCCCGCTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGC +
Preference number: 5 (lower is better)
Translates to: ACEHTYLLARLCLYI*IILCRNTSNVSSLC
Trigger: GCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGGTATGTTCACAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CTGGTTACCTCGGAATGCCTTACCCAGCAGGAACTAAGCTCAGTATTAAATGAATGGATGGCCAAAGTCTaGTTCCCAAGAACCACGGAG +
Preference number: 5 (lower is better)
Translates to: LVTSECLTQQELSSVLNEWMAKV*FPRTTE
Trigger: CTCCGTGGTTCTTGGGAACAAGACTTTGGCCATCCA...TTCATTTAATACTGAGCTTAGTTCCTGCTGGGTAAGGCATTCCGAGGTAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGGGTCACATCAGGACTaGGAGTGTTTTTCTGGATTT +
Preference number: 5 (lower is better)
Translates to: VISSDGNKPETVKHPEWRGSHQD*ECFSGF
Trigger: AAATCCAGAAAAACACTCCAAGTCCTGATGTGACCC...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGGTCACATCAGGACTaGGAGTGTTTTTCTGGATTT +
Preference number: 5 (lower is better)
Translates to: LTEHFWRAMASPTGKSARGSHQD*ECFSGF
Trigger: AAATCCAGAAAAACACTCCAAGTCCTGATGTGACCC...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp ATGGGTTCCCGGGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCGGGTCACATCAGGACTaGGAGTGTTTTTCTGGATTT +
Preference number: 5 (lower is better)
Translates to: MGSREWESSSRRKLHRNTGSHQD*ECFSGF
Trigger: AAATCCAGAAAAACACTCCAAGTCCTGATGTGACCC...GGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCCCGGGAACCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CAA 90 bp TTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCCGATCCAGGGTGGAATCCTGCCCATTaGATTATTTCTATCCCAAAT +
Preference number: 5 (lower is better)
Translates to: FSCTHQTVLGHWLQADPGWNPAH*IISIPN
Trigger: ATTTGGGATAGAAATAATCAAATGGGCAGGATTCCA...CCCTGGATCGGCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCCTGTTGTCCTCTCGGTCTTCACAGCACCTTaGTCTAAAAGCATGTTTAAA +
Preference number: 5 (lower is better)
Translates to: SKAPRVAREHFQMPVVLSVFTAP*SKSMFK
Trigger: TTTAAACATGCTTTTAGACAAAGGTGCTGTGAAGAC...CGAGAGGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp AATTTGAAAGCAGAACTATTTTGGTCATGTAGAAACCACAGGTCAGGGTTATCGCTGGCAGGGATGGTTTaGCCTGTGAGAGGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: NLKAELFWSCRNHRSGLSLAGMV*PVRGLE
Trigger: CTCCAGGCCTCTCACAGGCAAAACCATCCCTGCCAG...CGATAACCCTGACCTGTGGTTTCTACATGACCAAAATAGTTCTGCTTTCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598240.1
CDS-3UTR CAA 90 bp GTGAGAGAAAACTTGAGCAAGAGAAGAGACAGGCGTGGCCTATTTCCACACGCAGTTTTCTATGCTGAATaGTTCGATCTCTGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: VRENLSKRRDRRGLFPHAVFYAE*FDLWSH
Trigger: GTGGGACCAGAGATCGAACAATTCAGCATAGAAAAC...TGCGTGTGGAAATAGGCCACGCCTGTCTCTTCTCTTGCTCAAGTTTTCTCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGTTGGGTTTCTTCTTTTaGGACATGGGACGACCCCGA +
Preference number: 5 (lower is better)
Translates to: KGCNKTALDDAIRAKSAELGFFF*DMGRPR
Trigger: TCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCAA...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCGTTTTGATCTATTTGTaGGCCCGCTTGTGTCTGTAC +
Preference number: 5 (lower is better)
Translates to: PIQGRDDVLRAIAASRLIVLIYL*ARLCLY
Trigger: GTACAGACACAAGCGGGCCAACAAATAGATCAAAAC...GATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000452918.7
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAAGATTTGGAGGGGACTaGCTGCTAAAAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: VISSDGNKPETVKHPEWRRFGGD*LLKACE
Trigger: TTCACATGCTTTTAGCAGCAAGTCCCCTCCAAATCT...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CAA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAAGATTTGGAGGGGACTaGCTGCTAAAAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: LTEHFWRAMASPTGKSARRFGGD*LLKACE
Trigger: TTCACATGCTTTTAGCAGCAAGTCCCCTCCAAATCT...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTGTTTCCACATCACGTTaGCTAACAGAGCACTTCTGG +
Preference number: 5 (lower is better)
Translates to: ASELWYPSADLVITGNLSVSTSR*LTEHFW
Trigger: CCAGAAGTGCTCTGTTAGCAAACGTGATGTGGAAAC...AGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GGAACATCAACTTTGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGGTAATTACCGGGAATTaGTCTCCCCCGTATAAATTC +
Preference number: 5 (lower is better)
Translates to: GTSTLLGEISLHTSTPARVITGN*SPPYKF
Trigger: GAATTTATACGGGGGAGACAAATTCCCGGTAATTAC...CCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACAAAGTTGATGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GTCCGTTTGCTGGTCATGTTATGTGGTAGGTGGCTGTCATCTGTGAGAGAAAACGTAATAAGACAGCACTaGACGATGCCATACGTGCGA +
Preference number: 5 (lower is better)
Translates to: VRLLVMLCGRWLSSVRENVIRQH*TMPYVR
Trigger: TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTAC...GTTTTCTCTCACAGATGACAGCCACCTACCACATAACATGACCAGCAAACGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CCGATCCAGGGCAGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCCAGGGAACATCAACTTaGTTGGGGGAAATTTCTCTG +
Preference number: 5 (lower is better)
Translates to: PIQGRDDVLRAIAASRLIQGTST*LGEISL
Trigger: CAGAGAAATTTCCCCCAACAAAGTTGATGTTCCCTG...GATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCTGCCCTGGATCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GTCCGTTTGCTGGTCATGTTATGTGGTAGGTGGCTGTCATCTGTGAGAGAAAACCTAGGAACAGTCCGTTaGCTGGTCATGTTATGTGGT +
Preference number: 5 (lower is better)
Translates to: VRLLVMLCGRWLSSVRENLGTVR*LVMLCG
Trigger: ACCACATAACATGACCAGCAAACGGACTGTTCCTAG...GTTTTCTCTCACAGATGACAGCCACCTACCACATAACATGACCAGCAAACGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AGAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCAGAAGGAAAAGGATTaGAAGACCCTCACAAAGGGA +
Preference number: 5 (lower is better)
Translates to: RDVCFHVHTKPYLGTGSRQKEKD*KTLTKG
Trigger: TCCCTTTGTGAGGGTCTTCAAATCCTTTTCCTTCTG...CCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp ACAGGAGAGGTGTCCTCTGAGAGTGTAGGGGGCTTTCTAGGTTCAAGGAGATGTAGTGTTTTTCTGGATTaGGTTAGTGCCCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: TGEVSSESVGGFLGSRRCSVFLD*VSALSF
Trigger: AAAACTCAGGGCACTAACCAAATCCAGAAAAACACT...ACATCTCCTTGAACCTAGAAAGCCCCCTACACTCTCAGAGGACACCTCTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330854.15
ENST00000452918.7
CDS-3UTR CAA 90 bp GCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTGGGTCACATCAGGACTaGGAGTGTTTTTCTGGATTT +
Preference number: 5 (lower is better)
Translates to: ATVQRASELWYPSADLVIGSHQD*ECFSGF
Trigger: AAATCCAGAAAAACACTCCAAGTCCTGATGTGACCC...AATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGAGAGCACTTCCAGATGCTGGAATCCTGCCCATTaGATTATTTCTATCCCAAAT +
Preference number: 5 (lower is better)
Translates to: NKPETVKHPEWRESTSRCWNPAH*IISIPN
Trigger: ATTTGGGATAGAAATAATCAAATGGGCAGGATTCCA...GCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTTTTCTATGCTGAATaGTTCGATCTCTGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: ESFRALVPECRLGNYREFVFYAE*FDLWSH
Trigger: GTGGGACCAGAGATCGAACAATTCAGCATAGAAAAC...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTGTCTCCCCCGTATAAAGTTTTCTATGCTGAATaGTTCGATCTCTGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: WYPSADLVITGNLSPPYKVFYAE*FDLWSH
Trigger: GTGGGACCAGAGATCGAACAATTCAGCATAGAAAAC...TTTATACGGGGGAGACAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GTCCGTTTGCTGGTCATGTTATGTGGTAGGTGGCTGTCATCTGTGAGAGAAAACGTTTTCTATGCTGAATaGTTCGATCTCTGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: VRLLVMLCGRWLSSVRENVFYAE*FDLWSH
Trigger: GTGGGACCAGAGATCGAACAATTCAGCATAGAAAAC...GTTTTCTCTCACAGATGACAGCCACCTACCACATAACATGACCAGCAAACGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAATGAGACACACTCTCTaGGGAGCTGGAATCATGCCA +
Preference number: 5 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKMRHTL*GAGIMP
Trigger: TGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCAT...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAATTGGGTTTCTTCTTTTaGGACATGGGACGACCCCGA +
Preference number: 5 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKLGFFF*DMGRPR
Trigger: TCGGGGTCGTCCCATGTCCAAAAAGAAGAAACCCAA...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGGCGAAGTCCAAGTCCTaGGGTTTCTTCTTTTTGGAC +
Preference number: 5 (lower is better)
Translates to: KGCNKTALDDAIRAKSAEAKSKS*GFFFLD
Trigger: GTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGC...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTTTCACATCAGTGGTTTaGATCTATTTGTTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: ESFRALVPECRLGNYREFFTSVV*IYLLAR
Trigger: GCGGGCCAACAAATAGATCAAAACCACTGATGTGAA...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452918.7
ENST00000600239.5
CDS-3UTR CAA 90 bp CAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTAGACTGCAGAGACGTTaGTTTTCATGTACACACCAA +
Preference number: 5 (lower is better)
Translates to: QVWQLFRELQSFGTRVQTRLQRR*FSCTHQ
Trigger: TTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCT...AGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CATGGGCACAAACAGTCCATGAGATGCAGGTGTTTGGGACACACACTGAGACATAGACTGCAGAGACGTTaGTTTTCATGTACACACCAA +
Preference number: 5 (lower is better)
Translates to: HGHKQSMRCRCLGHTLRHRLQRR*FSCTHQ
Trigger: TTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCT...ATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCATGGACTGTTTGTGCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CAA 90 bp CAACTCAAGTATGGCAACTGTTCAGAGAGCTTCAGAGCTTTGGTACCCGAGTGCGTAATTACCGGGAATTaGTCTCCCCCGTATAAATTC +
Preference number: 5 (lower is better)
Translates to: QLKYGNCSESFRALVPECVITGN*SPPYKF
Trigger: GAATTTATACGGGGGAGACAAATTCCCGGTAATTAC...GCACTCGGGTACCAAAGCTCTGAAGCTCTCTGAACAGTTGCCATACTTGAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGATCTGTGAGAGAAAACTaGAGCAAGAGAAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: PLLTKAVIRQHLTMPYVRSVREN*SKRRDR
Trigger: CCTGTCTCTTCTCTTGCTCAAGTTTTCTCTCACAGA...TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAGGAGGAAGAGAACGATTTaGTTCAAAACTGAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: NRALLESNGQSNWKISQRRKRTI*FKTEVE
Trigger: TTCCACCTCAGTTTTGAACAAAATCGTTCTCTTCCT...CCTCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GCCAGCGAAACCTCCGCCCCAGAGACTGCAGAGACGTTTGTTTTCATGTACACATTCACATCAGTGGTTTaGATCTATTCAGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: ASETSAPETAETFVFMYTFTSVV*IYSGRE
Trigger: TTCTCTTCCTGAATAGATCAAAACCACTGATGTGAA...TGTGTACATGAAAACAAACGTCTCTGCAGTCTCTGGGGCGGAGGTTTCGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CAACCCCCATCCCTTTGTAACTGTAGTTTGCTTACACTGTGGATTCTAAAGAGATCACTGATGGAAGGGTaGCTTGATCTGAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: QPPSLCNCSLLTLWILKRSLMEG*LDLKEG
Trigger: GCCTTCCTTCAGATCAAGCAACCCTTCCATCAGTGA...TCTCTTTAGAATCCACAGTGTAAGCAAACTACAGTTACAAAGGGATGGGGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GAGACGTTTGTTTTCATGTACACACCAAACCGTACTTGGGCACTGGCTCCAGGCGTCTTCACAGCACCTTaGTCTAAAAGCATGTTTAAA +
Preference number: 5 (lower is better)
Translates to: ETFVFMYTPNRTWALAPGVFTAP*SKSMFK
Trigger: TTTAAACATGCTTTTAGACAAAGGTGCTGTGAAGAC...GCCTGGAGCCAGTGCCCAAGTACGGTTTGGTGTGTACATGAAAACAAACGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CGATTTCATCTGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTCTGGCGGGCAGTCCTaGGCAGCATCATTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: RFHLFNDYSPPDRAILYCSGGQS*AASFLS
Trigger: AGACAGAAATGATGCTGCCAAGGACTGCCCGCCAGA...ACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACAGATGAAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTCCAACCTTCAATGACTaGCTGCTGATCCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: GMGKQFQTETTQKYHLAFPTFND*LLILFR
Trigger: TCGGAAGAGGATCAGCAGCAAGTCATTGAAGGTTGG...AAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp GTGGTTTTGATCTATTTGTTGGCCCGCTTGTGTCTGTACATCTGCATCATCCTCGTTTTGATCTATTTGTaGGCCCGCTTGTGTCTGTAC +
Preference number: 5 (lower is better)
Translates to: VVLIYLLARLCLYICIILVLIYL*ARLCLY
Trigger: GTACAGACACAAGCGGGCCAACAAATAGATCAAAAC...GAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGATCAAAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000593795.5
ENST00000594773.5
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp CACTTAGCTTTTATGATGGTCACAAATGTGGCCAAAATGACCAGGGCCAACAAGTACCCGAGTGCAGACTaGGTAATTACCGGGAATTTG +
Preference number: 5 (lower is better)
Translates to: HLAFMMVTNVAKMTRANKYPSAD*VITGNL
Trigger: CAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTA...CTTGTTGGCCCTGGTCATTTTGGCCACATTTGTGACCATCATAAAAGCTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CAA 90 bp GGAACATCAACTTTGTTGGGGGAAATTTCTCTGCATACCAGCACGCCAGCGAGGCTTTGTAACTGTAGTTaGCTTACACTGTGGATTCTA +
Preference number: 5 (lower is better)
Translates to: GTSTLLGEISLHTSTPARLCNCS*LTLWIL
Trigger: TAGAATCCACAGTGTAAGCAAACTACAGTTACAAAG...CCTCGCTGGCGTGCTGGTATGCAGAGAAATTTCCCCCAACAAAGTTGATGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CCTCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAGGAACATCAACTTTGTaGGGGGAAATTTCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: PLLTKAVIRQHLTMPYVRGTSTL*GEISLH
Trigger: ATGCAGAGAAATTTCCCCCAACAAAGTTGATGTTCC...TCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTTTGTGTGTGGCATTTTaGGGGGAGCAGGGAACATCA +
Preference number: 5 (lower is better)
Translates to: NSGEQRENTICDRFHITFLCVAF*GEQGTS
Trigger: TGATGTTCCCTGCTCCCCCAAAAATGCCACACACAA...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CTAACAGAGCACTTCTGGAGAGCAATGGCCAGTCCAACTGGAAAATCAGCCAGAAGGAAGAGAACGATTTaGTTCAAAACTGAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: LTEHFWRAMASPTGKSARRKRTI*FKTEVE
Trigger: TTCCACCTCAGTTTTGAACAAAATCGTTCTCTTCCT...TCTGGCTGATTTTCCAGTTGGACTGGCCATTGCTCTCCAGAAGTGCTCTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS GCA 90 bp CCTAAAGCATTTAACTATTTGTTGGCCCGCTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAACACATCGAATGTGTCTTCTTTGTGC +
Preference number: 5 (lower is better)
Translates to: PKAFNYLLARLCLYI*IILCRNTSNVSSLC
Trigger: GCACAAAGAAGACACATTCGATGTGTTCCGACAGAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGTTAAATGCTTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS-3UTR CAA 90 bp GGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATGATTCACTGATGGAAGGGTaGCTTGATCTGAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: GKAVPDGNYTEIPLSFYDSLMEG*LDLKEG
Trigger: GCCTTCCTTCAGATCAAGCAACCCTTCCATCAGTGA...ATCATAAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTAGTGTTTTTCTGGATTaGGTTAGTGCCCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: ESFRALVPECRLGNYREFSVFLD*VSALSF
Trigger: AAAACTCAGGGCACTAACCAAATCCAGAAAAACACT...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGGGTCACATCAGGACTaGGAGTGTTTTTCTGGATTT +
Preference number: 5 (lower is better)
Translates to: PYKGCNKTALDDAIRAKSGSHQD*ECFSGF
Trigger: AAATCCAGAAAAACACTCCAAGTCCTGATGTGACCC...ACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCACTTCTGTCCCTGGGTTaGTCCCCAGGGTCACATCAG +
Preference number: 5 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPLLSLG*SPGSHQ
Trigger: CTGATGTGACCCTGGGGACAAACCCAGGGACAGAAG...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp CTTTACAGCCAATACAAGTGGCATTTCCCGCTCAGTTCTGTGGCTGATGCCCTATGGAATCCTGCCCATTaGATTATTTCTATCCCAAAT +
Preference number: 5 (lower is better)
Translates to: LYSQYKWHFPLSSVADALWNPAH*IISIPN
Trigger: ATTTGGGATAGAAATAATCAAATGGGCAGGATTCCA...TAGGGCATCAGCCACAGAACTGAGCGGGAAATGCCACTTGTATTGGCTGTAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000601879.5
CDS-3UTR CAA 90 bp GTGATTTCCAGTGATGGAAACAAGCCAGAGACAGTAAAGCACCCAGAGTGGCGAGTCTTCACAGCACCTTaGTCTAAAAGCATGTTTAAA +
Preference number: 5 (lower is better)
Translates to: VISSDGNKPETVKHPEWRVFTAP*SKSMFK
Trigger: TTTAAACATGCTTTTAGACAAAGGTGCTGTGAAGAC...TCGCCACTCTGGGTGCTTTACTGTCTCTGGCTTGTTTCCATCACTGGAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp TGCGGAGATGACGTGAAACAAATTGATGGACATAGTTCAAACACTTTCTTTCGATTCCGGCAGAGAGAGTaGGTGGTTTCTAGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: CGDDVKQIDGHSSNTFFRFRQRE*VVSRAR
Trigger: TCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGAA...TCGAAAGAAAGTGTTTGAACTATGTCCATCAATTTGTTTCACGTCATCTCCGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp TGCGGAGATGACGTGAAACAAATTGATGGACATAGTTCAAACACTTTCTTTCGATGGAGTCTTCGAAGTTaGGAAACGCAGCAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: CGDDVKQIDGHSSNTFFRWSLRS*ETQQVR
Trigger: CCTCACCTGCTGCGTTTCCAAACTTCGAAGACTCCA...TCGAAAGAAAGTGTTTGAACTATGTCCATCAATTTGTTTCACGTCATCTCCGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp AAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGCAGAGAGACTGCAGAGACGTTaGTTTTCATGTACACACCAA +
Preference number: 5 (lower is better)
Translates to: KGCNKTALDDAIRAKSAERLQRR*FSCTHQ
Trigger: TTGGTGTGTACATGAAAACAAACGTCTCTGCAGTCT...CTCTGCACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTAGAGGCAAAAGCACATaGAAAATGGTGCATGTTTTT +
Preference number: 5 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCRGKST*KMVHVF
Trigger: AAAAACATGCACCATTTTCAATGTGCTTTTGCCTCT...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GTCAGCTTCTGCTGGGCGAAGTCCAAGTCCTTGGGTTTCTTCTTTTTGGACATGAGAGGCAAAAGCACATaGAAAATGGTGCATGTTTTT +
Preference number: 5 (lower is better)
Translates to: VSFCWAKSKSLGFFFLDMRGKST*KMVHVF
Trigger: AAAAACATGCACCATTTTCAATGTGCTTTTGCCTCT...CATGTCCAAAAAGAAGAAACCCAAGGACTTGGACTTCGCCCAGCAGAAGCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597280.5
ENST00000600239.5
CDS-3UTR CAA 90 bp CATACGTGCGAAAAGTGCAGAGTCTCAGAGGGTTTACAACCCCCATCCCTTTGTCTTTGTAACTGTAGTTaGCTTACACTGTGGATTCTA +
Preference number: 5 (lower is better)
Translates to: HTCEKCRVSEGLQPPSLCLCNCS*LTLWIL
Trigger: TAGAATCCACAGTGTAAGCAAACTACAGTTACAAAG...ACAAAGGGATGGGGGTTGTAAACCCTCTGAGACTCTGCACTTTTCGCACGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTCAGGGAACATCAACTTaGTTGGGGGAAATTTCTCTG +
Preference number: 5 (lower is better)
Translates to: PYKGCNKTALDDAIRAKSQGTST*LGEISL
Trigger: CAGAGAAATTTCCCCCAACAAAGTTGATGTTCCCTG...ACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTCATTAAGTCTCTCATCACTGATGGAAGGGTaGCTTGATCTGAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: PHPIELFYTVAKISLSLSSLMEG*LDLKEG
Trigger: GCCTTCCTTCAGATCAAGCAACCCTTCCATCAGTGA...TGAGAGACTTAATGAAATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTTGGAATCCTGCCCATTaGATTATTTCTATCCCAAAT +
Preference number: 5 (lower is better)
Translates to: ESFRALVPECRLGNYREFWNPAH*IISIPN
Trigger: ATTTGGGATAGAAATAATCAAATGGGCAGGATTCCA...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CACTTAGCTTTTATGATGGTCACAAATGTGGCCAAAATGACCAGGGCCAACAAGCTTCAGAAGCCGGTCTaGAAGTCTCATTATGTACTT +
Preference number: 5 (lower is better)
Translates to: HLAFMMVTNVAKMTRANKLQKPV*KSHYVL
Trigger: AAGTACATAATGAGACTTCAAGACCGGCTTCTGAAG...CTTGTTGGCCCTGGTCATTTTGGCCACATTTGTGACCATCATAAAAGCTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTAGTTTCTTCTTGAGGTaGCGGACAGCCCGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: CLMITPHPIELFYTVAKISFFLR*RTAREY
Trigger: GTACTCCCGGGCTGTCCGCAACCTCAAGAAGAAACT...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GAGAGCTTCAGAGCTTTGGTACCCGAGTGCAGACTTGGTAATTACCGGGAATTTAGAGGCAAAAGCACATaGAAAATGGTGCATGTTTTT +
Preference number: 5 (lower is better)
Translates to: ESFRALVPECRLGNYREFRGKST*KMVHVF
Trigger: AAAAACATGCACCATTTTCAATGTGCTTTTGCCTCT...AAATTCCCGGTAATTACCAAGTCTGCACTCGGGTACCAAAGCTCTGAAGCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTAGATTTGGAGGGGACTaGCTGCTAAAAGCATGTGAA +
Preference number: 5 (lower is better)
Translates to: GMGKQFQTETTQKYHLAFRFGGD*LLKACE
Trigger: TTCACATGCTTTTAGCAGCAAGTCCCCTCCAAATCT...AAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS-3UTR CAA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTATAAAGATCTGCCAGTaGCCAAAGCTACAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: NSGEQRENTICDRFHITFIKICQ*PKLQKP
Trigger: TGGCTTCTGTAGCTTTGGCAACTGGCAGATCTTTAT...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452918.7
CDS-3UTR CAA 90 bp AGGGATGATGTTTTAAGGGCAATTGCTGCTTCAAGGCTTATCTTTCACATCAGTATGAGATGCAGGTGTTaGGGACACACACTGAGACAT +
Preference number: 5 (lower is better)
Translates to: RDDVLRAIAASRLIFHISMRCRC*GHTLRH
Trigger: ATGTCTCAGTGTGTGTCCCAAACACCTGCATCTCAT...ACTGATGTGAAAGATAAGCCTTGAAGCAGCAATTGCCCTTAAAACATCATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CAA 90 bp GGAATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTCTTCAGAAGCCGGTCTaGAAGTCTCATTATGTACTT +
Preference number: 5 (lower is better)
Translates to: GMGKQFQTETTQKYHLAFLQKPV*KSHYVL
Trigger: AAGTACATAATGAGACTTCAAGACCGGCTTCTGAAG...AAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
CDS-3UTR CAA 90 bp AATTCTGGCGAACAACGAGAAAACACCATCTGTGATCGTTTCCACATCACGTTTCTTCAGAAGCCGGTCTaGAAGTCTCATTATGTACTT +
Preference number: 5 (lower is better)
Translates to: NSGEQRENTICDRFHITFLQKPV*KSHYVL
Trigger: AAGTACATAATGAGACTTCAAGACCGGCTTCTGAAG...AAACGTGATGTGGAAACGATCACAGATGGTGTTTTCTCGTTGTTCGCCAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCATTCCGGCAGAGAGAGTaGGTGGTTTCTAGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPFRQRE*VVSRAR
Trigger: TCTTGCCCTAGAAACCACCAACTCTCTCTGCCGGAA...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp AATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATTATTTGTTGGCCCGCTaGTGTCTGTACATCTGCATC +
Preference number: 5 (lower is better)
Translates to: NGKAVPDGNYTEIPLSFYYLLAR*CLYICI
Trigger: GATGCAGATGTACAGACACAAGCGGGCCAACAAATA...ATAAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CAA 90 bp CCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTCATTAAGTCTCTCATATTTGTTGGCCCGCTaGTGTCTGTACATCTGCATC +
Preference number: 5 (lower is better)
Translates to: PHPIELFYTVAKISLSLSYLLAR*CLYICI
Trigger: GATGCAGATGTACAGACACAAGCGGGCCAACAAATA...TGAGAGACTTAATGAAATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GAGACATGTAAATCTGGGGCCGATTTCATCTGTTTAATGATTACTCCCCACCCGCTTTGTAACTGTAGTTaGCTTACACTGTGGATTCTA +
Preference number: 5 (lower is better)
Translates to: ETCKSGADFICLMITPHPLCNCS*LTLWIL
Trigger: TAGAATCCACAGTGTAAGCAAACTACAGTTACAAAG...CGGGTGGGGAGTAATCATTAAACAGATGAAATCGGCCCCAGATTTACATGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AGTTTGCTTACACTGTGGATTCTAAAGAGACATGTAAATCTGGGGCCGATTTCATCTGTGAGAGAAAACTaGAGCAAGAGAAGAGACAGG +
Preference number: 5 (lower is better)
Translates to: SLLTLWILKRHVNLGPISSVREN*SKRRDR
Trigger: CCTGTCTCTTCTCTTGCTCAAGTTTTCTCTCACAGA...TGAAATCGGCCCCAGATTTACATGTCTCTTTAGAATCCACAGTGTAAGCAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GAGACATGTAAATCTGGGGCCGATTTCATCTGTTTAATGATTACTCCCCACCCGTTCACATCAGTGGTTTaGATCTATTCAGGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: ETCKSGADFICLMITPHPFTSVV*IYSGRE
Trigger: TTCTCTTCCTGAATAGATCAAAACCACTGATGTGAA...CGGGTGGGGAGTAATCATTAAACAGATGAAATCGGCCCCAGATTTACATGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCATCACTGATGGAAGGGTaGCTTGATCTGAAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPSLMEG*LDLKEG
Trigger: GCCTTCCTTCAGATCAAGCAACCCTTCCATCAGTGA...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp TCTCCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAGTCTTCACAGCACCTTaGTCTAAAAGCATGTTTAAA +
Preference number: 5 (lower is better)
Translates to: SPYKGCNKTALDDAIRAKVFTAP*SKSMFK
Trigger: TTTAAACATGCTTTTAGACAAAGGTGCTGTGAAGAC...TTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CCTTACAAAGGCTGTAATAAGACAGCACTTGACGATGCCATACGTGCGAAAAGTGTCTTCACAGCACCTTaGTCTAAAAGCATGTTTAAA +
Preference number: 5 (lower is better)
Translates to: PYKGCNKTALDDAIRAKSVFTAP*SKSMFK
Trigger: TTTAAACATGCTTTTAGACAAAGGTGCTGTGAAGAC...ACTTTTCGCACGTATGGCATCGTCAAGTGCTGTCTTATTACAGCCTTTGTAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTCATTAAGTCTCTCATCTCTGCAGTCTCCATaGTCTTCATGTCAATGTCAG +
Preference number: 5 (lower is better)
Translates to: PHPIELFYTVAKISLSLSSLQSP*SSCQCQ
Trigger: CTGACATTGACATGAAGACAATGGAGACTGCAGAGA...TGAGAGACTTAATGAAATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTCCAACCTTCAATGACTaGCTGCTGATCCTCTTCCGA +
Preference number: 5 (lower is better)
Translates to: CLMITPHPIELFYTVAKIPTFND*LLILFR
Trigger: TCGGAAGAGGATCAGCAGCAAGTCATTGAAGGTTGG...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452918.7
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCAATGAGACACACTCTCTaGGGAGCTGGAATCATGCCA +
Preference number: 5 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPMRHTL*GAGIMP
Trigger: TGGCATGATTCCAGCTCCCAAGAGAGTGTGTCTCAT...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp GGCTTATCTTTCACATCAGTGGTTTTGATCTATTCAGGAAGAGAACGATTTTGTTACCCGAGTGCAGACTaGGTAATTACCGGGAATTTG +
Preference number: 5 (lower is better)
Translates to: GLSFTSVVLIYSGRERFCYPSAD*VITGNL
Trigger: CAAATTCCCGGTAATTACCAAGTCTGCACTCGGGTA...ACAAAATCGTTCTCTTCCTGAATAGATCAAAACCACTGATGTGAAAGATAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp CCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTTCATTAAGTCTCTCAGGAACATCAACTTTGTaGGGGGAAATTTCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: PHPIELFYTVAKISLSLSGTSTL*GEISLH
Trigger: ATGCAGAGAAATTTCCCCCAACAAAGTTGATGTTCC...TGAGAGACTTAATGAAATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS-3UTR CAA 90 bp AATGGGAAAGCAGTTCCAGACGGAAACTACACAGAAATACCACTTAGCTTTTATAGTGTTTTTCTGGATTaGGTTAGTGCCCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: NGKAVPDGNYTEIPLSFYSVFLD*VSALSF
Trigger: AAAACTCAGGGCACTAACCAAATCCAGAAAAACACT...ATAAAAGCTAAGTGGTATTTCTGTGTAGTTTCCGTCTGGAACTGCTTTCCCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594773.5
ENST00000600239.5
CDS-3UTR CAA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCATCTCTGCAGTCTCCATaGTCTTCATGTCAATGTCAG +
Preference number: 5 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPSLQSP*SSCQCQ
Trigger: CTGACATTGACATGAAGACAATGGAGACTGCAGAGA...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS-3UTR CAA 90 bp TGTTTAATGATTACTCCCCACCCGATAGAGCTATTCTATACTGTTGCTAAAATTGTTTTGATCTATTTGTaGGCCCGCTTGTGTCTGTAC +
Preference number: 5 (lower is better)
Translates to: CLMITPHPIELFYTVAKIVLIYL*ARLCLY
Trigger: GTACAGACACAAGCGGGCCAACAAATAGATCAAAAC...AATTTTAGCAACAGTATAGAATAGCTCTATCGGGTGGGGAGTAATCATTAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452918.7
ENST00000600239.5
CDS-3UTR CAA 90 bp GAAAACTTCCATTTTGTAACATCACAAATGTCTTCTAGGCTTTATCAAGGACCAAGTGTTTTTCTGGATTaGGTTAGTGCCCTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: ENFHFVTSQMSSRLYQGPSVFLD*VSALSF
Trigger: AAAACTCAGGGCACTAACCAAATCCAGAAAAACACT...TGGTCCTTGATAAAGCCTAGAAGACATTTGTGATGTTACAAAATGGAAGTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
CDS CCA 72 bp AGACGCTGCGGCTGCCGAGGCCTGTCCCGCGCGGAGTaGGGAGTGGGGGTGCCGCAGGGTCGGGCTGGCGCG +
Preference number: 6 (lower is better)
Translates to: RRCGCRGLSRAE*GVGVPQGRAGA
Trigger: CGCGCCAGCCCGACCCTGCGGCACCCCCACTCCCCACTCCGCGCGGGACAGGCCTCGGCAGCCGCAGCGTCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS TCA 72 bp CGCCCCACCTTTCCCCACGTGGCCGCGAAGACCGGGTaGGACGCTGCGGCTGCCGAGGCCTGTCCCGCGCGG +
Preference number: 6 (lower is better)
Translates to: RPTFPHVAAKTG*DAAAAEACPAR
Trigger: CCGCGCGGGACAGGCCTCGGCAGCCGCAGCGTCTCACCCGGTCTTCGCGGCCACGTGGGGAAAGGTGGGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS GCA 72 bp CCACGTGGCCGCGAAGACCGGGTGAGACGCTGCGGCTaGCGAGGCCTGTCCCGCGCGGAGTGGGGAGTGGGG +
Preference number: 6 (lower is better)
Translates to: PRGREDRVRRCG*RGLSRAEWGVG
Trigger: CCCCACTCCCCACTCCGCGCGGGACAGGCCTCGGCAGCCGCAGCGTCTCACCCGGTCTTCGCGGCCACGTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS CCA 72 bp ACCGGTTCTAAAGAGGGCAAGGGCCCGATGCAGCGCTaGGCGCCGTTATCTCCTCCCGAGCGGGGGCCGCTC +
Preference number: 6 (lower is better)
Translates to: TGSKEGKGPMQR*APLSPPERGPL
Trigger: GAGCGGCCCCCGCTCGGGAGGAGATAACGGCGCCCAGCGCTGCATCGGGCCCTTGCCCTCTTTAGAACCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594445.1
CDS GCA 72 bp GGGGCTGAACCGGTTCTAAAGAGGGCAAGGGCCCGATaGAGCGCTGGGCGCCGTTATCTCCTCCCGAGCGGG +
Preference number: 6 (lower is better)
Translates to: GAEPVLKRARAR*SAGRRYLLPSG
Trigger: CCCGCTCGGGAGGAGATAACGGCGCCCAGCGCTGCATCGGGCCCTTGCCCTCTTTAGAACCGGTTCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594445.1
CDS TCA 72 bp CCGAGTTCGGGAGGAATGAATGAACGACTGAACCAATaGGCCTTTGTGGACGCGGCCCGCCGTCTCCCGGCC +
Preference number: 6 (lower is better)
Translates to: PSSGGMNERLNQ*AFVDAARRLPA
Trigger: GGCCGGGAGACGGCGGGCCGCGTCCACAAAGGCTCATTGGTTCAGTCGTTCATTCATTCCTCCCGAACTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594445.1
CDS TCA 72 bp CCGAGCGGGGGCCGCTCCGAGTTCGGGAGGAATGAATaGACGACTGAACCAATGAGCCTTTGTGGACGCGGC +
Preference number: 6 (lower is better)
Translates to: PSGGRSEFGRNE*TTEPMSLCGRG
Trigger: GCCGCGTCCACAAAGGCTCATTGGTTCAGTCGTTCATTCATTCCTCCCGAACTCGGAGCGGCCCCCGCTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594445.1
CDS CAA 90 bp ATCTGCCATCGCTGTGGACGTCATCATACATCTCTGCTCTGGATCTaGGGACTGCCCTTAAGAGATCCCGAGACCACCGCGCGCGGAGCC +
Preference number: 6 (lower is better)
Translates to: ICHRCGRHHTSLLWI*GLPLRDPETTARGA
Trigger: GGCTCCGCGCGCGGTGGTCTCGGGATCTCTTAAGGGCAGTCCCAAGATCCAGAGCAGAGATGTATGATGACGTCCACAGCGATGGCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598202.1
CDS TCA 72 bp TCAACGATGTTTAGAGCTCGACCTCTGGCCTGGACTTaGCTGCCGCCCCTAAGCACAGAGTCAGCCTCCCCA +
Preference number: 6 (lower is better)
Translates to: STMFRARPLAWT*LPPLSTESASP
Trigger: TGGGGAGGCTGACTCTGTGCTTAGGGGCGGCAGTCAAGTCCAGGCCAGAGGTCGAGCTCTAAACATCGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
ENST00000598202.1
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS TCA 72 bp TGGGCTGAGCCCCGCTTGGAGCTCCATCCATTCACCTaGCCCATGGCCAACATGGAAGCAAACCGTACTTGG +
Preference number: 6 (lower is better)
Translates to: WAEPRLELHPFT*PMANMEANRTW
Trigger: CCAAGTACGGTTTGCTTCCATGTTGGCCATGGGTCAGGTGAATGGATGGAGCTCCAAGCGGGGCTCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598863.1
CDS CCA 72 bp GGAGCTGTGCACGACCTGGGCCCTTCTTTTTGGACATaGGACGACCCCGAGGCCTGTCATAGGCAATTCGAA +
Preference number: 6 (lower is better)
Translates to: GAVHDLGPSFWT*DDPEACHRQFE
Trigger: TTCGAATTGCCTATGACAGGCCTCGGGGTCGTCCCATGTCCAAAAAGAAGGGCCCAGGTCGTGCACAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593795.5
CDS CCA 72 bp AGCCCCGCTTGGAGCTCCATCCATTCACCTGACCCATaGCCAACATGGAAGCAAACCGTACTTGGGCACTGG +
Preference number: 6 (lower is better)
Translates to: SPAWSSIHSPDP*PTWKQTVLGHW
Trigger: CCAGTGCCCAAGTACGGTTTGCTTCCATGTTGGCCATGGGTCAGGTGAATGGATGGAGCTCCAAGCGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598863.1
CDS CCA 72 bp ACCAGCACGCCAGCGAGGGCAGACGGCCTTACACACTaGCCTGTGAACATACCTATTTGTTGGCCCGCTTGT +
Preference number: 6 (lower is better)
Translates to: TSTPARADGLTH*PVNIPICWPAC
Trigger: ACAAGCGGGCCAACAAATAGGTATGTTCACAGGCCAGTGTGTAAGGCCGTCTGCCCTCGCTGGCGTGCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS CAA 72 bp CTGCCATGTTATTTTGCCCTTGGTTCGCGGTCGTCCTaGGTTATCGTGAGCGTCCGCGAGTCTCTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: LPCYFALGSRSS*VIVSVRESLGG
Trigger: GCCTCCCAGAGACTCGCGGACGCTCACGATAACCAAGGACGACCGCGAACCAAGGGCAAAATAACATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS TCA 72 bp CGCCAGCGAGGGCAGACGGCCTTACACACTGGCCTGTaGACATACCTATTTGTTGGCCCGCTTGTGTCTGTA +
Preference number: 6 (lower is better)
Translates to: RQRGQTALHTGL*TYLFVGPLVSV
Trigger: TACAGACACAAGCGGGCCAACAAATAGGTATGTTCACAGGCCAGTGTGTAAGGCCGTCTGCCCTCGCTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS TCA 72 bp AAAATACACTTGGTTCGCGGTCGTCCTTGGTTATCGTaGGCGTCCGCGAGTCTCTGGGAGGCCAAGCCTAGG +
Preference number: 6 (lower is better)
Translates to: KIHLVRGRPWLS*ASASLWEAKPR
Trigger: CCTAGGCTTGGCCTCCCAGAGACTCGCGGACGCTCACGATAACCAAGGACGACCGCGAACCAAGTGTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601879.5
CDS CAA 72 bp CGCTGTGGACGTCATCATACATCTCTGCTCTGGATCTaGGGACTGCCCTTAAGAGATCCCGAGACCACCGCG +
Preference number: 6 (lower is better)
Translates to: RCGRHHTSLLWI*GLPLRDPETTA
Trigger: CGCGGTGGTCTCGGGATCTCTTAAGGGCAGTCCCAAGATCCAGAGCAGAGATGTATGATGACGTCCACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598202.1
CDS CAA 90 bp AGCGAGGGCAGACGGCCTTACACACTGGCCTGTGAACATACCTATTaGTTGGCCCGCTTGTGTCTGTACATCTGCATCATCCTCTGTCGG +
Preference number: 6 (lower is better)
Translates to: SEGRRPYTLACEHTY*LARLCLYICIILCR
Trigger: CCGACAGAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGGTATGTTCACAGGCCAGTGTGTAAGGCCGTCTGCCCTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS CCA 72 bp TGCCATCGCTGTGGACGTCATCATACATCTCTGCTCTaGATCTTGGGACTGCCCTTAAGAGATCCCGAGACC +
Preference number: 6 (lower is better)
Translates to: CHRCGRHHTSLL*ILGLPLRDPET
Trigger: GGTCTCGGGATCTCTTAAGGGCAGTCCCAAGATCCAGAGCAGAGATGTATGATGACGTCCACAGCGATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598202.1
CDS CAA 90 bp GAGGGCAGACGGCCTTACACACTGGCCTGTGAACATACCTATTTGTaGGCCCGCTTGTGTCTGTACATCTGCATCATCCTCTGTCGGAAC +
Preference number: 6 (lower is better)
Translates to: EGRRPYTLACEHTYL*ARLCLYICIILCRN
Trigger: GTTCCGACAGAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGGTATGTTCACAGGCCAGTGTGTAAGGCCGTCTGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS TCA 72 bp TCACTTCTCAGGCCTTCTCTTCCGGCATCTCTAGAGTaGGCTACAGATCCACTGAGGGAGTATCTGCCATCG +
Preference number: 6 (lower is better)
Translates to: SLLRPSLPASLE*ATDPLREYLPS
Trigger: CGATGGCAGATACTCCCTCAGTGGATCTGTAGCTCACTCTAGAGATGCCGGAAGAGAAGGCCTGAGAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594445.1
ENST00000594773.5
ENST00000598202.1
ENST00000598240.1
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS TCA 72 bp TGTTCCCAAGAACCACGGAGCGCAAATTTCCAGTCCTaGGAACGGAAATGCCCCAATTTCCGGTGGCCAATG +
Preference number: 6 (lower is better)
Translates to: CSQEPRSANFQS*ERKCPNFRWPM
Trigger: CATTGGCCACCGGAAATTGGGGCATTTCCGTTCTCAGGACTGGAAATTTGCGCTCCGTGGTTCTTGGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
ENST00000598202.1
ENST00000598240.1
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS CCA 72 bp GCTACAGATCCACTGAGGGAGTATCTGCCATCGCTGTaGACGTCATCATACATCTCTGCTCTGGATCTTGGG +
Preference number: 6 (lower is better)
Translates to: ATDPLREYLPSL*TSSYISALDLG
Trigger: CCCAAGATCCAGAGCAGAGATGTATGATGACGTCCACAGCGATGGCAGATACTCCCTCAGTGGATCTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594445.1
ENST00000594773.5
ENST00000598202.1
ENST00000598240.1
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS TCA 72 bp CCTGAGAACGGAAATGCCCCAATTTCCGGTGGCCAATaGCCTGGTCCCGAGAATCAGAGTGAGAAAATTCCA +
Preference number: 6 (lower is better)
Translates to: PENGNAPISGGQ*PGPENQSEKIP
Trigger: TGGAATTTTCTCACTCTGATTCTCGGGACCAGGTCATTGGCCACCGGAAATTGGGGCATTTCCGTTCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
ENST00000598202.1
ENST00000598240.1
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS GCA 72 bp GTCTCCTGTGTAATTCGTCTGGCTGCCATGTTATTTTaGCCTATGGAATGGGCAGCCAGTAAAGGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: VSCVIRLAAMLF*PMEWAASKGAG
Trigger: ACCAGCCCCTTTACTGGCTGCCCATTCCATAGGGCAAAATAACATGGCAGCCAGACGAATTACACAGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594445.1
CDS CCA 72 bp GATCTTCTGAATGGGGAACTGGATATCTTCTGTCCCTaGGTTTGTCCCCAGGGTCACATCAGGACTTGGAGT +
Preference number: 6 (lower is better)
Translates to: DLLNGELDIFCP*VCPQGHIRTWS
Trigger: ACTCCAAGTCCTGATGTGACCCTGGGGACAAACCCAGGGACAGAAGATATCCAGTTCCCCATTCAGAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS CCA 72 bp GATTCTTCAGATCCAGCCCCAGAGGGATCTTCTGAATaGGGAACTGGATATCTTCTGTCCCTGGGTTTGTCC +
Preference number: 6 (lower is better)
Translates to: DSSDPAPEGSSE*GTGYLLSLGLS
Trigger: GGACAAACCCAGGGACAGAAGATATCCAGTTCCCCATTCAGAAGATCCCTCTGGGGCTGGATCTGAAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS CAA 72 bp CGGCCTTACACACTGGCCTGTGAACATACCTATTTGTaGGCCCGCTTGTGTCTGTACATCTGCATCATCCTC +
Preference number: 6 (lower is better)
Translates to: RPYTLACEHTYL*ARLCLYICIIL
Trigger: GAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGGTATGTTCACAGGCCAGTGTGTAAGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS CAA 90 bp CGGCCTTACACACTGGCCTGTGAACATACCTATTTGTTGGCCCGCTaGTGTCTGTACATCTGCATCATCCTCTGTCGGAACACATCGAAT +
Preference number: 6 (lower is better)
Translates to: RPYTLACEHTYLLAR*CLYICIILCRNTSN
Trigger: ATTCGATGTGTTCCGACAGAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGGTATGTTCACAGGCCAGTGTGTAAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS TCA 72 bp CGAAGATTCTTCAGATCCAGCCCCAGAGGGATCTTCTaGATGGGGAACTGGATATCTTCTGTCCCTGGGTTT +
Preference number: 6 (lower is better)
Translates to: RRFFRSSPRGIF*MGNWISSVPGF
Trigger: AAACCCAGGGACAGAAGATATCCAGTTCCCCATTCAGAAGATCCCTCTGGGGCTGGATCTGAAGAATCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS TCA 72 bp CCCACAGGTCAGGGTTATCGGTGCTGTTTTCTATGCTaGATTGTTCGATCTCTGGTCCCACCTGAGCAACAA +
Preference number: 6 (lower is better)
Translates to: PTGQGYRCCFLC*IVRSLVPPEQQ
Trigger: TTGTTGCTCAGGTGGGACCAGAGATCGAACAATTCAGCATAGAAAACAGCACCGATAACCCTGACCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS CCA 72 bp TGCCATCGCTGTGGACGTCATCATACATCTCTGCTCTaGATCTTGGGACTGCCCTTAAGAGATCTTGAGCTT +
Preference number: 6 (lower is better)
Translates to: CHRCGRHHTSLL*ILGLPLRDLEL
Trigger: AAGCTCAAGATCTCTTAAGGGCAGTCCCAAGATCCAGAGCAGAGATGTATGATGACGTCCACAGCGATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594445.1
ENST00000594773.5
ENST00000598240.1
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS CCA 72 bp GGCCTTACACACTGGCCTGTGAACATACCTATTTGTTaGCCCGCTTGTGTCTGTACATCTGCATCATCCTCT +
Preference number: 6 (lower is better)
Translates to: GLTHWPVNIPIC*PACVCTSASSS
Trigger: AGAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGGTATGTTCACAGGCCAGTGTGTAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS CAA 72 bp ACACTGGCCTGTGAACATACCTATTTGTTGGCCCGCTaGTGTCTGTACATCTGCATCATCCTCTGTCGGAAC +
Preference number: 6 (lower is better)
Translates to: TLACEHTYLLAR*CLYICIILCRN
Trigger: GTTCCGACAGAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGGTATGTTCACAGGCCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS CAA 72 bp AGACGGCCTTACACACTGGCCTGTGAACATACCTATTaGTTGGCCCGCTTGTGTCTGTACATCTGCATCATC +
Preference number: 6 (lower is better)
Translates to: RRPYTLACEHTY*LARLCLYICII
Trigger: GATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGGTATGTTCACAGGCCAGTGTGTAAGGCCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS CAA 90 bp AGGTCCCCACAGGTCAGGGTTATCGGTGCTGTTTTCTATGCTGAATaGTTCGATCTCTGGTCCCACCTGAGCAACAAATCTAGCCAGTTT +
Preference number: 6 (lower is better)
Translates to: RSPQVRVIGAVFYAE*FDLWSHLSNKSSQF
Trigger: AAACTGGCTAGATTTGTTGCTCAGGTGGGACCAGAGATCGAACAATTCAGCATAGAAAACAGCACCGATAACCCTGACCTGTGGGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600239.5
CDS GCA 72 bp TACAGCATCAAAAGTCTCCTGTGTAATTCGTCTGGCTaGCATGTTATTTTGCCCTTGGTTCGCGGTCGTCCT +
Preference number: 6 (lower is better)
Translates to: YSIKSLLCNSSG*HVILPLVRGRP
Trigger: AGGACGACCGCGAACCAAGGGCAAAATAACATGGCAGCCAGACGAATTACACAGGAGACTTTTGATGCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594773.5
CDS GCA 72 bp TGGAACTATTTGTTGGCCCGCTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAACACATCGAATGTGTCT +
Preference number: 6 (lower is better)
Translates to: WNYLLARLCLYI*IILCRNTSNVS
Trigger: AGACACATTCGATGTGTTCCGACAGAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337018.10
CDS GCA 72 bp TACAGCATCAAAAGTCTCCTGTGTAATTCGTCTGGCTaGCATGTTATTTTGCCCTATGGAATGGGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: YSIKSLLCNSSG*HVILPYGMGSQ
Trigger: CTGGCTGCCCATTCCATAGGGCAAAATAACATGGCAGCCAGACGAATTACACAGGAGACTTTTGATGCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594445.1
CDS GCA 72 bp CATACCTATTTGTTGGCCCGCTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAACACATCGAATGTGTCT +
Preference number: 6 (lower is better)
Translates to: HTYLLARLCLYI*IILCRNTSNVS
Trigger: AGACACATTCGATGTGTTCCGACAGAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600377.1
ENST00000601879.5
CDS TCA 72 bp GGACTTGGAGTGTTTTTCTGGATTTGGTTAGTGCCCTaGGTTTTGGGAGTAATACGATTCACGGTGGGTATT +
Preference number: 6 (lower is better)
Translates to: GLGVFFWIWLVP*VLGVIRFTVGI
Trigger: AATACCCACCGTGAATCGTATTACTCCCAAAACTCAGGGCACTAACCAAATCCAGAAAAACACTCCAAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000330854.15
ENST00000337018.10
ENST00000452918.7
ENST00000594773.5
ENST00000600239.5
ENST00000600377.1
ENST00000601879.5
CDS GCA 72 bp TTTAACTATTTGTTGGCCCGCTTGTGTCTGTACATCTaGATCATCCTCTGTCGGAACACATCGAATGTGTCT +
Preference number: 6 (lower is better)
Translates to: FNYLLARLCLYI*IILCRNTSNVS
Trigger: AGACACATTCGATGTGTTCCGACAGAGGATGATGCAGATGTACAGACACAAGCGGGCCAACAAATAGTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330854.15
CDS GCA 72 bp TACAGCATCAAAAGTCTCCTGTGTAATTCGTCTGGCTaGCATGTTATTTTGCCCTATGGTGAGAGAGAAAAA +
Preference number: 6 (lower is better)
Translates to: YSIKSLLCNSSG*HVILPYGEREK
Trigger: TTTTTCTCTCTCACCATAGGGCAAAATAACATGGCAGCCAGACGAATTACACAGGAGACTTTTGATGCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601879.5