Pregenerated sensors for SUCLG2 (Homo sapiens)
Ensembl gene IDs: ENSG00000172340Ensembl transcript IDs: ENST00000492795.1, ENST00000493112.5
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GGCGGTCTTACTGTAAAGTCCATGTTCGTTCCACTCCCTCTGGCAGTCTCTCTACTTCCCGGCCTGCGCTaGTACGGGGGACGCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: GGLTVKSMFVPLPLAVSLLPGLR*YGGRHL Trigger: AAGATGGCGTCCCCCGTAGCAGCGCAGGCCGGGAAG...TAGAGAGACTGCCAGAGGGAGTGGAACGAACATGGACTTTACAGTAAGACCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492795.1 |
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| CDS-3UTR GCA 90 bp | TTAAGGCGGTCTTACTGTAAAGTCCATGTTCGTTCCACTCCCTCTGGCAGTCTCAGAAGCTTCCCGGCCTaGGCTGCTACGGGGGACGCC | + |
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Preference number: 4 (lower is better) Translates to: LRRSYCKVHVRSTPSGSLRSFPA*AATGDA Trigger: GGCGTCCCCCGTAGCAGCGCAGGCCGGGAAGCTTCT...GAGACTGCCAGAGGGAGTGGAACGAACATGGACTTTACAGTAAGACCGCCTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492795.1 |
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| CDS-3UTR TCA 90 bp | AGGCGGTCTTACTGTAAAGTCCATGTTCGTTCCACTCCCTCTGGCAGTCTCTCTCTTCTGGAGGTTAATTaGACTGCCTGGGACCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: RRSYCKVHVRSTPSGSLSLLEVN*TAWDPA Trigger: GGCCGGGTCCCAGGCAGTTCAATTAACCTCCAGAAG...AGAGAGACTGCCAGAGGGAGTGGAACGAACATGGACTTTACAGTAAGACCGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492795.1 |
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| CDS-3UTR TCA 90 bp | TCCACTCCCTCTGGCAGTCTCTCTATAATCAGAGACTCCCAAGATGAGTCAGGACAGAGACTCCCAAGATaGGTCAGGAGTTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: STPSGSLSIIRDSQDESGQRLPR*VRSSSS Trigger: GGAGCTGGAACTCCTGACTCATCTTGGGAGTCTCTG...TCCTGACTCATCTTGGGAGTCTCTGATTATAGAGAGACTGCCAGAGGGAGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492795.1 |
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| CDS-3UTR CCA 90 bp | TTAAGGCGGTCTTACTGTAAAGTCCATGTTCGTTCCACTCCCTCTGGCAGTCTCTCGTTCCACTCCCTCTaGCAGTCTCTCTATAATCAG | + |
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Preference number: 4 (lower is better) Translates to: LRRSYCKVHVRSTPSGSLSFHSL*QSLYNQ Trigger: CTGATTATAGAGAGACTGCCAGAGGGAGTGGAACGA...GAGACTGCCAGAGGGAGTGGAACGAACATGGACTTTACAGTAAGACCGCCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492795.1 |
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| CDS-3UTR GCA 90 bp | AGGCGGTCTTACTGTAAAGTCCATGTTCGTTCCACTCCCTCTGGCAGTCTCTCTGCTTTCAAATTTTGCTaGTTAGGATCAGCTGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RRSYCKVHVRSTPSGSLSAFKFC*LGSAVS Trigger: GCTCACAGCTGATCCTAAGCAGCAAAATTTGAAAGC...AGAGAGACTGCCAGAGGGAGTGGAACGAACATGGACTTTACAGTAAGACCGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492795.1 |
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| CDS-3UTR CCA 90 bp | TCCACTCCCTCTGGCAGTCTCTCTATAATCAGAGACTCCCAAGATGAGTCAGGAGTTCCAGCTCCATATTaGTCCTATTTCCAAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: STPSGSLSIIRDSQDESGVPAPY*SYFQAS Trigger: TGAAGCTTGGAAATAGGACCAATATGGAGCTGGAAC...TCCTGACTCATCTTGGGAGTCTCTGATTATAGAGAGACTGCCAGAGGGAGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492795.1 |
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| CDS-3UTR TCA 90 bp | ATGGTGTCAAGATTTAAATTAAGGCGGTCTTACTGTAAAGTCCATGTTCGTTCCTCAAGAACGTGCTTCTaGGTCCTGTATTCTGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: MVSRFKLRRSYCKVHVRSSRTCF*VLYSGA Trigger: GGCACCAGAATACAGGACTCAGAAGCACGTTCTTGA...GGAACGAACATGGACTTTACAGTAAGACCGCCTTAATTTAAATCTTGACACCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492795.1 |
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| CDS-3UTR GCA 90 bp | ATGGTGTCAAGATTTAAATTAAGGCGGTCTTACTGTAAAGTCCATGTTCGTTCCCTTGCTTTCAAATTTTaGTGCTTAGGATCAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: MVSRFKLRRSYCKVHVRSLAFKF*CLGSAV Trigger: CACAGCTGATCCTAAGCAGCAAAATTTGAAAGCAAG...GGAACGAACATGGACTTTACAGTAAGACCGCCTTAATTTAAATCTTGACACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492795.1 |
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| CDS-3UTR GCA 90 bp | ATGGTGTCAAGATTTAAATTAAGGCGGTCTTACTGTAAAGTCCATGTTCGTTCCAGTCCTGTATTCTGGTaGCCAAGTATTTCTTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: MVSRFKLRRSYCKVHVRSSPVFW*PSISCF Trigger: AAAGCAAGAAATACTTGGGCACCAGAATACAGGACT...GGAACGAACATGGACTTTACAGTAAGACCGCCTTAATTTAAATCTTGACACCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492795.1 |
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| CDS-3UTR CAA 90 bp | AGGCGGTCTTACTGTAAAGTCCATGTTCGTTCCACTCCCTCTGGCAGTCTCTCTAGTTCCAGCTCCATATaGGTCCTATTTCCAAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: RRSYCKVHVRSTPSGSLSSSSSI*VLFPSF Trigger: GAAGCTTGGAAATAGGACCAATATGGAGCTGGAACT...AGAGAGACTGCCAGAGGGAGTGGAACGAACATGGACTTTACAGTAAGACCGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492795.1 |
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| CDS TCA 90 bp | CCAGCTCCATATTGGTCCTATTTCCAAGCTTCAAGAACGTGCTTCTaGGTCCTGTATTCTGGTGCCCAAGTATTTCTTGCTTTCAAATTT | + |
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Preference number: 5 (lower is better) Translates to: PAPYWSYFQASRTCF*VLYSGAQVFLAFKF Trigger: AAATTTGAAAGCAAGAAATACTTGGGCACCAGAATACAGGACTCAGAAGCACGTTCTTGAAGCTTGGAAATAGGACCAATATGGAGCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492795.1 |
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| CDS CCA 72 bp | GCACACTTACTCAGATTTTGGTGGGCGACGTTCTCTTaGATACCAGTTATATTCTCATTTGAATTTCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: AHLLRFWWATFS*IPVIFSFEFPV Trigger: AACAGGAAATTCAAATGAGAATATAACTGGTATCCAAGAGAACGTCGCCCACCAAAATCTGAGTAAGTGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493112.5 |
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