Pregenerated sensors for SUCLA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000136143Ensembl transcript IDs: ENST00000470760.2, ENST00000481279.2, ENST00000484941.2, ENST00000493152.6, ENST00000642944.1, ENST00000643246.1, ENST00000643584.1, ENST00000644338.1, ENST00000646602.1, ENST00000646804.1, ENST00000647008.1, ENST00000647361.1
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGGAGCTGATGTCATCCACACACTTCACTGGAACTGGAGGATCTaGTTCCAGGTTGGCTCACTCACACGCCTGGCGAGTCGCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: AGADVIHTLHWNWRI*FQVGSLTRLASRCC Trigger: GCAGCAGCGACTCGCCAGGCGTGTGAGTGAGCCAACCTGGAAGCAGATCCTCCAGTTCCAGTGAAGTGTGTGGATGACATCAGCTCCAGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR TCA 90 bp | ACACGCCTGGCGAGTCGCTGCTGCAAACCTCGGTTTCCCCCTACGTaGGCCTCTCCTCATGCAGCTTGGATGTCCATTTTTGATGCTAAC | + |
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Preference number: 1 (lower is better) Translates to: TRLASRCCKPRFPPT*ASPHAAWMSIFDAN Trigger: GTTAGCATCAAAAATGGACATCCAAGCTGCATGAGGAGAGGCTCACGTAGGGGGAAACCGAGGTTTGCAGCAGCGACTCGCCAGGCGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR TCA 90 bp | CATTGGAGTGCTTTAGAAAGAAGGAAGCCAGTGCAAGGAAAGCCCTaGGCTGATTCCTTACTTGGGTCGAGCCCTCTTGAAGAGGATGGG | + |
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Preference number: 1 (lower is better) Translates to: HWSALERRKPVQGKP*ADSLLGSSPLEEDG Trigger: CCCATCCTCTTCAAGAGGGCTCGACCCAAGTAAGGAATCAGCTCAGGGCTTTCCTTGCACTGGCTTCCTTCTTTCTAAAGCACTCCAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR TCA 90 bp | CAAGGGTGGTTCTGGCTTAGGGCATCTCATGAGTTGTGGTCAAAATaGAGGCTGGAGCTGATGTCATCCACACACTTCACTGGAACTGGA | + |
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Preference number: 1 (lower is better) Translates to: QGWFWLRASHELWSK*RLELMSSTHFTGTG Trigger: TCCAGTTCCAGTGAAGTGTGTGGATGACATCAGCTCCAGCCTTCATTTTGACCACAACTCATGAGATGCCCTAAGCCAGAACCACCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR GCA 90 bp | ATGCTCAGCTGGTCACTCTGGAATTGTCACTCTCAACTGATGAACTaGAGGCTCTCAACTGGTGGTCAATCAACTCCTTCAGCCATCCAC | + |
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Preference number: 1 (lower is better) Translates to: MLSWSLWNCHSQLMN*RLSTGGQSTPSAIH Trigger: GTGGATGGCTGAAGGAGTTGATTGACCACCAGTTGAGAGCCTGCAGTTCATCAGTTGAGAGTGACAATTCCAGAGTGACCAGCTGAGCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493152.6 |
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| 3UTR CCA 90 bp | GCTTTTCTCCAGTTTCCTTCATATTACATGCTCAGCTGGTCACTCTaGAATTGTCACTCTCAACTGATGAACTGCAGGCTCTCAACTGGT | + |
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Preference number: 1 (lower is better) Translates to: AFLQFPSYYMLSWSL*NCHSQLMNCRLSTG Trigger: ACCAGTTGAGAGCCTGCAGTTCATCAGTTGAGAGTGACAATTCCAGAGTGACCAGCTGAGCATGTAATATGAAGGAAACTGGAGAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493152.6 |
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| 3UTR GCA 90 bp | GCTGAGTTGACAGTAGCATTTTCAATGCAATGCTTACATATTCAGTaGTCTTGCCTTGACTCACAAATGTCTGTTCCCATGGAACACTGG | + |
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Preference number: 1 (lower is better) Translates to: AELTVAFSMQCLHIQ*SCLDSQMSVPMEHW Trigger: CCAGTGTTCCATGGGAACAGACATTTGTGAGTCAAGGCAAGAGCACTGAATATGTAAGCATTGCATTGAAAATGCTACTGTCAACTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR CCA 90 bp | CAGTGCTCTTGCCTTGACTCACAAATGTCTGTTCCCATGGAACACTaGCTACATCACACTAATATAAGCATCACCACACTTATACATATT | + |
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Preference number: 1 (lower is better) Translates to: QCSCLDSQMSVPMEH*LHHTNISITTLIHI Trigger: AATATGTATAAGTGTGGTGATGCTTATATTAGTGTGATGTAGCCAGTGTTCCATGGGAACAGACATTTGTGAGTCAAGGCAAGAGCACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR TCA 90 bp | ATGTATGCCATTAGTAACTGGTTCTCATCACTGCAATTGTTTTCATaGGGCAGAGACAGCAAGATTCTTACAGACAGACAGCTTCTAACA | + |
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Preference number: 1 (lower is better) Translates to: MYAISNWFSSLQLFS*GRDSKILTDRQLLT Trigger: TGTTAGAAGCTGTCTGTCTGTAAGAATCTTGCTGTCTCTGCCTCATGAAAACAATTGCAGTGATGAGAACCAGTTACTAATGGCATACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR CAA 90 bp | ATGTCATCCACACACTTCACTGGAACTGGAGGATCTGCTTCCAGGTaGGCTCACTCACACGCCTGGCGAGTCGCTGCTGCAAACCTCGGT | + |
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Preference number: 2 (lower is better) Translates to: MSSTHFTGTGGSASR*AHSHAWRVAAANLG Trigger: ACCGAGGTTTGCAGCAGCGACTCGCCAGGCGTGTGAGTGAGCCAACCTGGAAGCAGATCCTCCAGTTCCAGTGAAGTGTGTGGATGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR-3UTR CCA 90 bp | GAAAGCCCTGAGCTGATTCCTTACTTGGGTCGAGCCCTCTTGAAGAGGATGGGCTGCTCACCCAGAAGATaGGCTGAAATGTGTGATGTA | + |
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Preference number: 2 (lower is better) Translates to: ESPELIPYLGRALLKRMGCSPRR*AEMCDV Trigger: TACATCACACATTTCAGCCCATCTTCTGGGTGAGCA...GCCCATCCTCTTCAAGAGGGCTCGACCCAAGTAAGGAATCAGCTCAGGGCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR-3UTR CCA 90 bp | GAAAGCCCTGAGCTGATTCCTTACTTGGGTCGAGCCCTCTTGAAGAGGATGGGCAAAGGGACACTATTATaGGTATTATCTGCACCTAGA | + |
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Preference number: 2 (lower is better) Translates to: ESPELIPYLGRALLKRMGKGTLL*VLSAPR Trigger: TCTAGGTGCAGATAATACCCATAATAGTGTCCCTTT...GCCCATCCTCTTCAAGAGGGCTCGACCCAAGTAAGGAATCAGCTCAGGGCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR CAA 90 bp | TCTCCAGTTTCCTTCATATTACATGCTCAGCTGGTCACTCTGGAATaGTCACTCTCAACTGATGAACTGCAGGCTCTCAACTGGTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: SPVSFILHAQLVTLE*SLSTDELQALNWWS Trigger: TGACCACCAGTTGAGAGCCTGCAGTTCATCAGTTGAGAGTGACAATTCCAGAGTGACCAGCTGAGCATGTAATATGAAGGAAACTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493152.6 |
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| 3UTR-3UTR TCA 90 bp | GTTTTCCTTCTGCATTGGAGTGCTTTAGAAAGAAGGAAGCCAGTGCAAGGAAAGGAGTTGTGGTCAAAATaGAGGCTGGAGCTGATGTCA | + |
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Preference number: 2 (lower is better) Translates to: VFLLHWSALERRKPVQGKELWSK*RLELMS Trigger: TGACATCAGCTCCAGCCTTCATTTTGACCACAACTC...CTTTCCTTGCACTGGCTTCCTTCTTTCTAAAGCACTCCAATGCAGAAGGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR-3UTR TCA 90 bp | GTTTTCCTTCTGCATTGGAGTGCTTTAGAAAGAAGGAAGCCAGTGCAAGGAAAGGAAGGTCAGCAGAGGTaGCACAACAGATCTTATAGA | + |
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Preference number: 2 (lower is better) Translates to: VFLLHWSALERRKPVQGKEGQQR*HNRSYR Trigger: TCTATAAGATCTGTTGTGTCACCTCTGCTGACCTTC...CTTTCCTTGCACTGGCTTCCTTCTTTCTAAAGCACTCCAATGCAGAAGGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR-3UTR CCA 90 bp | CTTGGAGGAAGAATAATTGACTGTACCGGGGTCAGTTGGAGAGGGTCTAGGAGTTATGCCATTAGTAACTaGTTCTCATCACTGCAATTG | + |
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Preference number: 2 (lower is better) Translates to: LGGRIIDCTGVSWRGSRSYAISN*FSSLQL Trigger: CAATTGCAGTGATGAGAACCAGTTACTAATGGCATA...ACTCCTAGACCCTCTCCAACTGACCCCGGTACAGTCAATTATTCTTCCTCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR-3UTR CCA 90 bp | GTTTTCCTTCTGCATTGGAGTGCTTTAGAAAGAAGGAAGCCAGTGCAAGGAAAGTCTCCTCATGCAGCTTaGATGTCCATTTTTGATGCT | + |
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Preference number: 2 (lower is better) Translates to: VFLLHWSALERRKPVQGKSPHAA*MSIFDA Trigger: AGCATCAAAAATGGACATCCAAGCTGCATGAGGAGA...CTTTCCTTGCACTGGCTTCCTTCTTTCTAAAGCACTCCAATGCAGAAGGAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR-3UTR CCA 90 bp | CTGCTAGGTGCCAGATATTCTATTTCAAAGCTGGTGTGGAATCCACAAGCTTGCATTGATCCCTCCTCATaGTTTCCAAAAGTCAAGATG | + |
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Preference number: 2 (lower is better) Translates to: LLGARYSISKLVWNPQACIDPSS*FPKVKM Trigger: CATCTTGACTTTTGGAAACCATGAGGAGGGATCAAT...GCAAGCTTGTGGATTCCACACCAGCTTTGAAATAGAATATCTGGCACCTAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR-3UTR TCA 90 bp | ATATATTATTTCCACTTTCGGAATTTAAAAGCAGCTTCAAGGGTGGTTCTGGCTTTGATGCTAACTTCCTaGTTCAAAGGCGAGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: IYYFHFRNLKAASRVVLALMLTS*FKGEGQ Trigger: CTGTCCCTCGCCTTTGAATCAGGAAGTTAGCATCAA...AGCCAGAACCACCCTTGAAGCTGCTTTTAAATTCCGAAAGTGGAAATAATATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR-3UTR TCA 90 bp | ATATTATTTCCACTTTCGGAATTTAAAAGCAGCTTCAAGGGTGGTTCTGGCTTAAATGAAGGCTGGAGCTaGTGTCATCCACACACTTCA | + |
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Preference number: 2 (lower is better) Translates to: ILFPLSEFKSSFKGGSGLNEGWS*CHPHTS Trigger: TGAAGTGTGTGGATGACATCAGCTCCAGCCTTCATT...TAAGCCAGAACCACCCTTGAAGCTGCTTTTAAATTCCGAAAGTGGAAATAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR-3UTR GCA 90 bp | ATTGGTTATCCATTGCAACATAACAAATGGCATGCAAAACAAATCACTACCCCAGTGAGCCTCTCCTCATaGAGCTTGGATGTCCATTTT | + |
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Preference number: 2 (lower is better) Translates to: IGYPLQHNKWHAKQITTPVSLSS*SLDVHF Trigger: AAAATGGACATCCAAGCTGCATGAGGAGAGGCTCAC...TGGGGTAGTGATTTGTTTTGCATGCCATTTGTTATGTTGCAATGGATAACCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR-3UTR TCA 90 bp | ACCAGAAGCTTTATGTTCAACATTTTAGGTTCCATAAAGAGAGGAGAGCTGTGCTTCTCAATCTGGAGATaGTCCAGAGATGATTTAAGC | + |
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Preference number: 2 (lower is better) Translates to: TRSFMFNILGSIKRGELCFSIWR*SRDDLS Trigger: GCTTAAATCATCTCTGGATCATCTCCAGATTGAGAA...GCACAGCTCTCCTCTCTTTATGGAACCTAAAATGTTGAACATAAAGCTTCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470760.2 |
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| 3UTR-3UTR TCA 90 bp | ATATTATTTCCACTTTCGGAATTTAAAAGCAGCTTCAAGGGTGGTTCTGGCTTACTGCAATTGTTTTCATaGGGCAGAGACAGCAAGATT | + |
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Preference number: 2 (lower is better) Translates to: ILFPLSEFKSSFKGGSGLLQLFS*GRDSKI Trigger: AATCTTGCTGTCTCTGCCTCATGAAAACAATTGCAG...TAAGCCAGAACCACCCTTGAAGCTGCTTTTAAATTCCGAAAGTGGAAATAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR CAA 90 bp | GAAAAATCAGTAAATAAGGACCTGTGCAATTGCCTTTTGGGACCTTaGTTGATTTCTCTCATTCAAAGGGACACTATTATGGGTATTATC | + |
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Preference number: 2 (lower is better) Translates to: EKSVNKDLCNCLLGP*LISLIQRDTIMGII Trigger: GATAATACCCATAATAGTGTCCCTTTGAATGAGAGAAATCAACAAAGGTCCCAAAAGGCAATTGCACAGGTCCTTATTTACTGATTTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR-3UTR CCA 90 bp | AAAAACAAGCTAGTTAACACACAGATTCAGCTTGTAAAACCTAATACCCTCGAACAGAAGATGAGGCAATaGATACACATTCTTCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: KNKLVNTQIQLVKPNTLEQKMRQ*IHILLV Trigger: CACTAGAAGAATGTGTATCCATTGCCTCATCTTCTG...TTCGAGGGTATTAGGTTTTACAAGCTGAATCTGTGTGTTAACTAGCTTGTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470760.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTAATGGCAGTGATGGTGATGATGATGATGATGATAGCAATAACATATGGCGTATTGGTTATCCATTaGAACATAACAAATGGCATG | + |
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Preference number: 2 (lower is better) Translates to: CLMAVMVMMMMMIAITYGVLVIH*NITNGM Trigger: CATGCCATTTGTTATGTTGCAATGGATAACCAATAC...GCCATATGTTATTGCTATCATCATCATCATCATCACCATCACTGCCATTAAACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTATTATGGAGATATATAAGACAGTGTCCCATCCATTCTACACAATTTACACCACAGCTCTATTATaGAGATATATAAGACAGTGT | + |
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Preference number: 2 (lower is better) Translates to: SSIMEIYKTVSHPFYTIYTTALL*RYIRQC Trigger: ACACTGTCTTATATATCTCCATAATAGAGCTGTGGT...GTAAATTGTGTAGAATGGATGGGACACTGTCTTATATATCTCCATAATAGAGCT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644338.1 ENST00000646602.1 |
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| 3UTR CCA 72 bp | GGAGGATCTGCTTCCAGGTTGGCTCACTCACACGCCTaGCGAGTCGCTGCTGCAAACCTCGGTTTCCCCCTA | + |
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Preference number: 3 (lower is better) Translates to: GGSASRLAHSHA*RVAAANLGFPL Trigger: TAGGGGGAAACCGAGGTTTGCAGCAGCGACTCGCCAGGCGTGTGAGTGAGCCAACCTGGAAGCAGATCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR GCA 72 bp | GATGTCATCCACACACTTCACTGGAACTGGAGGATCTaGTTCCAGGTTGGCTCACTCACACGCCTGGCGAGT | + |
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Preference number: 3 (lower is better) Translates to: DVIHTLHWNWRI*FQVGSLTRLAS Trigger: ACTCGCCAGGCGTGTGAGTGAGCCAACCTGGAAGCAGATCCTCCAGTTCCAGTGAAGTGTGTGGATGACATC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR CCA 72 bp | GCTGGAGCTGATGTCATCCACACACTTCACTGGAACTaGAGGATCTGCTTCCAGGTTGGCTCACTCACACGC | + |
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Preference number: 3 (lower is better) Translates to: AGADVIHTLHWN*RICFQVGSLTR Trigger: GCGTGTGAGTGAGCCAACCTGGAAGCAGATCCTCCAGTTCCAGTGAAGTGTGTGGATGACATCAGCTCCAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR-3UTR CAA 90 bp | GAAAGCCCTGAGCTGATTCCTTACTTGGGTCGAGCCCTCTTGAAGAGGATGGGCTCTGAAGGTCCAGCCTaGTACAGAAGGACAAAACCC | + |
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Preference number: 3 (lower is better) Translates to: ESPELIPYLGRALLKRMGSEGPA*YRRTKP Trigger: GGGTTTTGTCCTTCTGTACAAGGCTGGACCTTCAGA...GCCCATCCTCTTCAAGAGGGCTCGACCCAAGTAAGGAATCAGCTCAGGGCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR CCA 72 bp | ATGAAGGCTGGAGCTGATGTCATCCACACACTTCACTaGAACTGGAGGATCTGCTTCCAGGTTGGCTCACTC | + |
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Preference number: 3 (lower is better) Translates to: MKAGADVIHTLH*NWRICFQVGSL Trigger: GAGTGAGCCAACCTGGAAGCAGATCCTCCAGTTCCAGTGAAGTGTGTGGATGACATCAGCTCCAGCCTTCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR CCA 72 bp | CTTGGAGGAAGAATAATTGACTGTACCGGGGTCAGTTaGAGAGGGTCTAGGAGTGGTGGATCCACTGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: LGGRIIDCTGVS*RGSRSGGSTGS Trigger: TGACCCAGTGGATCCACCACTCCTAGACCCTCTCCAACTGACCCCGGTACAGTCAATTATTCTTCCTCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR GCA 72 bp | CTTCCTGATTCAAAGGCGAGGGACAGCTCAACCACCTaGTCACCCAGAAGATGGGCTGAAATGTGTGATGTA | + |
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Preference number: 3 (lower is better) Translates to: LPDSKARDSSTT*SPRRWAEMCDV Trigger: TACATCACACATTTCAGCCCATCTTCTGGGTGAGCAGGTGGTTGAGCTGTCCCTCGCCTTTGAATCAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR TCA 72 bp | GCTTTAGAAAGAAGGAAGCCAGTGCAAGGAAAGCCCTaGGCTGATTCCTTACTTGGGTCGAGCCCTCTTGAA | + |
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Preference number: 3 (lower is better) Translates to: ALERRKPVQGKP*ADSLLGSSPLE Trigger: TTCAAGAGGGCTCGACCCAAGTAAGGAATCAGCTCAGGGCTTTCCTTGCACTGGCTTCCTTCTTTCTAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR CCA 72 bp | TTGTCACTCTCAACTGATGAACTGCAGGCTCTCAACTaGTGGTCAATCAACTCCTTCAGCCATCCACTGGGT | + |
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Preference number: 3 (lower is better) Translates to: LSLSTDELQALN*WSINSFSHPLG Trigger: ACCCAGTGGATGGCTGAAGGAGTTGATTGACCACCAGTTGAGAGCCTGCAGTTCATCAGTTGAGAGTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493152.6 |
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| 3UTR TCA 72 bp | TTCTGGCTTAGGGCATCTCATGAGTTGTGGTCAAAATaGAGGCTGGAGCTGATGTCATCCACACACTTCACT | + |
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Preference number: 3 (lower is better) Translates to: FWLRASHELWSK*RLELMSSTHFT Trigger: AGTGAAGTGTGTGGATGACATCAGCTCCAGCCTTCATTTTGACCACAACTCATGAGATGCCCTAAGCCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR GCA 72 bp | TGGTCACTCTGGAATTGTCACTCTCAACTGATGAACTaGAGGCTCTCAACTGGTGGTCAATCAACTCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: WSLWNCHSQLMN*RLSTGGQSTPS Trigger: TGAAGGAGTTGATTGACCACCAGTTGAGAGCCTGCAGTTCATCAGTTGAGAGTGACAATTCCAGAGTGACCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493152.6 |
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| 3UTR CCA 72 bp | AGGTGGACATCATGGCTGGATAATGACTCATCAGGCTaGGTTTTCCTTCTGCATTGGAGTGCTTTAGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: RWTSWLDNDSSG*VFLLHWSALER Trigger: TCTTTCTAAAGCACTCCAATGCAGAAGGAAAACCCAGCCTGATGAGTCATTATCCAGCCATGATGTCCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR TCA 72 bp | TTCAATGCAATGCTTACATATTCAGTGCTCTTGCCTTaGCTCACAAATGTCTGTTCCCATGGAACACTGGCT | + |
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Preference number: 3 (lower is better) Translates to: FNAMLTYSVLLP*LTNVCSHGTLA Trigger: AGCCAGTGTTCCATGGGAACAGACATTTGTGAGTCAAGGCAAGAGCACTGAATATGTAAGCATTGCATTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR CCA 72 bp | TGCCTTGACTCACAAATGTCTGTTCCCATGGAACACTaGCTACATCACACTAATATAAGCATCACCACACTT | + |
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Preference number: 3 (lower is better) Translates to: CLDSQMSVPMEH*LHHTNISITTL Trigger: AAGTGTGGTGATGCTTATATTAGTGTGATGTAGCCAGTGTTCCATGGGAACAGACATTTGTGAGTCAAGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR GCA 72 bp | ACAGTAGCATTTTCAATGCAATGCTTACATATTCAGTaGTCTTGCCTTGACTCACAAATGTCTGTTCCCATG | + |
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Preference number: 3 (lower is better) Translates to: TVAFSMQCLHIQ*SCLDSQMSVPM Trigger: CATGGGAACAGACATTTGTGAGTCAAGGCAAGAGCACTGAATATGTAAGCATTGCATTGAAAATGCTACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR GCA 72 bp | GGAAATAATTCCTTTTATCTTATGCTAACTGCTAGGTaGCAGATATTCTATTTCAAAGCTGGTGTGGAATCC | + |
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Preference number: 3 (lower is better) Translates to: GNNSFYLMLTAR*QIFYFKAGVES Trigger: GGATTCCACACCAGCTTTGAAATAGAATATCTGGCACCTAGCAGTTAGCATAAGATAAAAGGAATTATTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR TCA 90 bp | CTTCACTGGAACTGGAGGATCTGCTTCCAGGTTGGCTCACTCACACGCCTGGCGTGGGTCGAGCCCTCTTaGAGAGGATGGGCATTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LHWNWRICFQVGSLTRLAWVEPS*RGWAFP Trigger: GGGAAATGCCCATCCTCTTCAAGAGGGCTCGACCCA...CGCCAGGCGTGTGAGTGAGCCAACCTGGAAGCAGATCCTCCAGTTCCAGTGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR CAA 72 bp | ACACACTTCACTGGAACTGGAGGATCTGCTTCCAGGTaGGCTCACTCACACGCCTGGCGAGTCGCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: THFTGTGGSASR*AHSHAWRVAAA Trigger: TGCAGCAGCGACTCGCCAGGCGTGTGAGTGAGCCAACCTGGAAGCAGATCCTCCAGTTCCAGTGAAGTGTGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR GCA 90 bp | CTTGGAGGAAGAATAATTGACTGTACCGGGGTCAGTTGGAGAGGGTCTAGGAGTCCACGGCCACTAGCCTaGCGTAGAACATGGAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: LGGRIIDCTGVSWRGSRSPRPLA*RRTWRP Trigger: CGGCCTCCATGTTCTACGGCAGGCTAGTGGCCGTGG...ACTCCTAGACCCTCTCCAACTGACCCCGGTACAGTCAATTATTCTTCCTCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR CAA 72 bp | AGCCCTGAGCTGATTCCTTACTTGGGTCGAGCCCTCTaGAAGAGGATGGGCATTTCCCCATCCTCCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SPELIPYLGRAL*KRMGISPSSCG Trigger: TCCACAGGAGGATGGGGAAATGCCCATCCTCTTCAAGAGGGCTCGACCCAAGTAAGGAATCAGCTCAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR TCA 90 bp | CTTCACTGGAACTGGAGGATCTGCTTCCAGGTTGGCTCACTCACACGCCTGGCGAATGAAGGCTGGAGCTaGTGTCATCCACACACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHWNWRICFQVGSLTRLANEGWS*CHPHTS Trigger: TGAAGTGTGTGGATGACATCAGCTCCAGCCTTCATT...CGCCAGGCGTGTGAGTGAGCCAACCTGGAAGCAGATCCTCCAGTTCCAGTGAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| CDS-3UTR TCA 90 bp | GCGAGGGACAGCTCAACCACCTGCTCACCCAGAAGATGGGCTGAAATGTGTGATAGGAAAGCCCTGAGCTaGTTCCTTACTTGGGTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARDSSTTCSPRRWAEMCDRKALS*FLTWVE Trigger: CTCGACCCAAGTAAGGAATCAGCTCAGGGCTTTCCT...ATCACACATTTCAGCCCATCTTCTGGGTGAGCAGGTGGTTGAGCTGTCCCTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| CDS-3UTR GCA 90 bp | GCGAGGGACAGCTCAACCACCTGCTCACCCAGAAGATGGGCTGAAATGTGTGATATCCTCCTGTGGAGATaGCTGAGAAGGTCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARDSSTTCSPRRWAEMCDILLWR*LRRSAE Trigger: CTCTGCTGACCTTCTCAGGCATCTCCACAGGAGGAT...ATCACACATTTCAGCCCATCTTCTGGGTGAGCAGGTGGTTGAGCTGTCCCTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CCA 90 bp | CTGCTAGGTGCCAGATATTCTATTTCAAAGCTGGTGTGGAATCCACAAGCTTGCGGTGGTTCCGAAGGGTaGCCACGGCCACTAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGARYSISKLVWNPQACGGSEG*PRPLAC Trigger: GCAGGCTAGTGGCCGTGGCCACCCTTCGGAACCACC...GCAAGCTTGTGGATTCCACACCAGCTTTGAAATAGAATATCTGGCACCTAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| 3UTR CAA 72 bp | AGCCAGTGCAAGGAAAGCCCTGAGCTGATTCCTTACTaGGGTCGAGCCCTCTTGAAGAGGATGGGCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQCKESPELIPY*GRALLKRMGIS Trigger: GGAAATGCCCATCCTCTTCAAGAGGGCTCGACCCAAGTAAGGAATCAGCTCAGGGCTTTCCTTGCACTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR TCA 90 bp | GCGAGGGACAGCTCAACCACCTGCTCACCCAGAAGATGGGCTGAAATGTGTGATGAGTTGTGGTCAAAATaGAGGCTGGAGCTGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ARDSSTTCSPRRWAEMCDELWSK*RLELMS Trigger: TGACATCAGCTCCAGCCTTCATTTTGACCACAACTC...ATCACACATTTCAGCCCATCTTCTGGGTGAGCAGGTGGTTGAGCTGTCCCTCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR TCA 90 bp | ACCAGAAGCTTTATGTTCAACATTTTAGGTTCCATAAAGAGAGGAGAGCTGTGCGAACTTCCCAGAACCTaGGCAGCAGCCCGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TRSFMFNILGSIKRGELCELPRT*AAARWA Trigger: GGCCCAGCGGGCTGCTGCTCAGGTTCTGGGAAGTTC...GCACAGCTCTCCTCTCTTTATGGAACCTAAAATGTTGAACATAAAGCTTCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470760.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTCCTTCTGCATTGGAGTGCTTTAGAAAGAAGGAAGCCAGTGCAAGGAAAGCGGTTTCCCCCTACGTaGGCCTCTCCTCATGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFLLHWSALERRKPVQGKRFPPT*ASPHAA Trigger: AGCTGCATGAGGAGAGGCTCACGTAGGGGGAAACCG...CTTTCCTTGCACTGGCTTCCTTCTTTCTAAAGCACTCCAATGCAGAAGGAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| CDS-3UTR TCA 90 bp | CTTGGAGGAAGAATAATTGACTGTACCGGGGTCAGTTGGAGAGGGTCTAGGAGTGTGCAAGGAAAGCCCTaGGCTGATTCCTTACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGGRIIDCTGVSWRGSRSVQGKP*ADSLLG Trigger: CCCAAGTAAGGAATCAGCTCAGGGCTTTCCTTGCAC...ACTCCTAGACCCTCTCCAACTGACCCCGGTACAGTCAATTATTCTTCCTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| CDS-3UTR CCA 90 bp | ATATTATTTCCACTTTCGGAATTTAAAAGCAGCTTCAAGGGTGGTTCTGGCTTAGCCGTCCGAGGCCGGTaGTTCCGAAGGGTGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: ILFPLSEFKSSFKGGSGLAVRGR*FRRVAT Trigger: CGTGGCCACCCTTCGGAACCACCGGCCTCGGACGGC...TAAGCCAGAACCACCCTTGAAGCTGCTTTTAAATTCCGAAAGTGGAAATAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| CDS-3UTR CCA 90 bp | ATAAGACAGTGTCCCATCCATTCTACACAATTTACAGAAAATAAAGGGGACACAGCCGTCCGAGGCCGGTaGTTCCGAAGGGTGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: IRQCPIHSTQFTENKGDTAVRGR*FRRVAT Trigger: CGTGGCCACCCTTCGGAACCACCGGCCTCGGACGGC...TGTGTCCCCTTTATTTTCTGTAAATTGTGTAGAATGGATGGGACACTGTCTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000644338.1 ENST00000646602.1 |
||
| CDS-3UTR CCA 90 bp | TCTTTTGAACCTACTACACTTCTTTCCGCCATAGAATTCATCATCTTCGTACATGCCGTCCGAGGCCGGTaGTTCCGAAGGGTGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SFEPTTLLSAIEFIIFVHAVRGR*FRRVAT Trigger: CGTGGCCACCCTTCGGAACCACCGGCCTCGGACGGC...ATGTACGAAGATGATGAATTCTATGGCGGAAAGAAGTGTAGTAGGTTCAAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647361.1 |
||
| CDS-3UTR GCA 90 bp | ACCAGAAGCTTTATGTTCAACATTTTAGGTTCCATAAAGAGAGGAGAGCTGTGCCCACGGCCACTAGCCTaGCGTAGAACATGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TRSFMFNILGSIKRGELCPRPLA*RRTWRP Trigger: CGGCCTCCATGTTCTACGGCAGGCTAGTGGCCGTGG...GCACAGCTCTCCTCTCTTTATGGAACCTAAAATGTTGAACATAAAGCTTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470760.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACAAGCTAGTTAACACACAGATTCAGCTTGTAAAACCTAATACCCTCGAAGCCGTCCGAGGCCGGTaGTTCCGAAGGGTGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: KNKLVNTQIQLVKPNTLEAVRGR*FRRVAT Trigger: CGTGGCCACCCTTCGGAACCACCGGCCTCGGACGGC...TTCGAGGGTATTAGGTTTTACAAGCTGAATCTGTGTGTTAACTAGCTTGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470760.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTATTATGGAGATATATAAGACAGTGTCCCATCCATTCTACACAATTTACAGCCGTCCGAGGCCGGTaGTTCCGAAGGGTGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: ALLWRYIRQCPIHSTQFTAVRGR*FRRVAT Trigger: CGTGGCCACCCTTCGGAACCACCGGCCTCGGACGGC...TGTAAATTGTGTAGAATGGATGGGACACTGTCTTATATATCTCCATAATAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644338.1 ENST00000646602.1 |
||
| CDS-3UTR CCA 90 bp | ACTGATGAACTGCAGGCTCTCAACTGGTGGTCAATCAACTCCTTCAGCCATCCACTGCAGGCTCTCAACTaGTGGTCAATCAACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TDELQALNWWSINSFSHPLQALN*WSINSF Trigger: GAAGGAGTTGATTGACCACCAGTTGAGAGCCTGCAG...TGGATGGCTGAAGGAGTTGATTGACCACCAGTTGAGAGCCTGCAGTTCATCAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493152.6 |
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| CDS-3UTR CCA 90 bp | AGGCTGGGTTTTCCTTCTGCATTGGAGTGCTTTAGAAAGAAGGAAGCCAGTGCATTCCCCATCCTCCTGTaGAGATGCCTGAGAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLGFPSALECFRKKEASAFPILL*RCLRRS Trigger: TGACCTTCTCAGGCATCTCCACAGGAGGATGGGGAA...TGCACTGGCTTCCTTCTTTCTAAAGCACTCCAATGCAGAAGGAAAACCCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| CDS-3UTR TCA 90 bp | CTTGGAGGAAGAATAATTGACTGTACCGGGGTCAGTTGGAGAGGGTCTAGGAGTTTGATGCTAACTTCCTaGTTCAAAGGCGAGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LGGRIIDCTGVSWRGSRSLMLTS*FKGEGQ Trigger: CTGTCCCTCGCCTTTGAATCAGGAAGTTAGCATCAA...ACTCCTAGACCCTCTCCAACTGACCCCGGTACAGTCAATTATTCTTCCTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| CDS-3UTR TCA 90 bp | ATTGGTTATCCATTGCAACATAACAAATGGCATGCAAAACAAATCACTACCCCAGAACTTCCCAGAACCTaGGCAGCAGCCCGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IGYPLQHNKWHAKQITTPELPRT*AAARWA Trigger: GGCCCAGCGGGCTGCTGCTCAGGTTCTGGGAAGTTC...TGGGGTAGTGATTTGTTTTGCATGCCATTTGTTATGTTGCAATGGATAACCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| CDS-3UTR TCA 90 bp | ATAAGACAGTGTCCCATCCATTCTACACAATTTACAGAAAATAAAGGGGACACAGAACTTCCCAGAACCTaGGCAGCAGCCCGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IRQCPIHSTQFTENKGDTELPRT*AAARWA Trigger: GGCCCAGCGGGCTGCTGCTCAGGTTCTGGGAAGTTC...TGTGTCCCCTTTATTTTCTGTAAATTGTGTAGAATGGATGGGACACTGTCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000644338.1 ENST00000646602.1 |
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| CDS-3UTR TCA 90 bp | GCTCTATTATGGAGATATATAAGACAGTGTCCCATCCATTCTACACAATTTACAGGAGGCCGCCATTTCTaGGTCGGACCCCGTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALLWRYIRQCPIHSTQFTGGRHF*VGPRPL Trigger: GAGGGGACGGGGTCCGACTCAGAAATGGCGGCCTCC...TGTAAATTGTGTAGAATGGATGGGACACTGTCTTATATATCTCCATAATAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646602.1 |
||
| CDS-3UTR GCA 90 bp | CTTCACTGGAACTGGAGGATCTGCTTCCAGGTTGGCTCACTCACACGCCTGGCGAAATATCCATGGCAGTaGTGTATTCATAAACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHWNWRICFQVGSLTRLAKYPWQ*CIHKHF Trigger: GAAGTGTTTATGAATACAGCACTGCCATGGATATTT...CGCCAGGCGTGTGAGTGAGCCAACCTGGAAGCAGATCCTCCAGTTCCAGTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CCA 90 bp | ATAAACCACAGCTCTATTATGGAGATATATAAGACAGTGTCCCATCCATTCTACGGTGGTTCCGAAGGGTaGCCACGGCCACTAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: INHSSIMEIYKTVSHPFYGGSEG*PRPLAC Trigger: GCAGGCTAGTGGCCGTGGCCACCCTTCGGAACCACC...GTAGAATGGATGGGACACTGTCTTATATATCTCCATAATAGAGCTGTGGTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644338.1 ENST00000646602.1 |
||
| CDS-3UTR CCA 90 bp | TCTTTTGAACCTACTACACTTCTTTCCGCCATAGAATTCATCATCTTCGTACATGGTGGTTCCGAAGGGTaGCCACGGCCACTAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFEPTTLLSAIEFIIFVHGGSEG*PRPLAC Trigger: GCAGGCTAGTGGCCGTGGCCACCCTTCGGAACCACC...ATGTACGAAGATGATGAATTCTATGGCGGAAAGAAGTGTAGTAGGTTCAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647361.1 |
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| CDS-3UTR CCA 90 bp | AGCTCAACCACCTGCTCACCCAGAAGATGGGCTGAAATGTGTGATGTATGCCATATCCACACACTTCACTaGAACTGGAGGATCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSTTCSPRRWAEMCDVCHIHTLH*NWRICF Trigger: GAAGCAGATCCTCCAGTTCCAGTGAAGTGTGTGGAT...ATGGCATACATCACACATTTCAGCCCATCTTCTGGGTGAGCAGGTGGTTGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR TCA 90 bp | CTTGGAGGAAGAATAATTGACTGTACCGGGGTCAGTTGGAGAGGGTCTAGGAGTGAAGGTCAGCAGAGGTaGCACAACAGATCTTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGGRIIDCTGVSWRGSRSEGQQR*HNRSYR Trigger: TCTATAAGATCTGTTGTGTCACCTCTGCTGACCTTC...ACTCCTAGACCCTCTCCAACTGACCCCGGTACAGTCAATTATTCTTCCTCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR TCA 90 bp | CTGCTAGGTGCCAGATATTCTATTTCAAAGCTGGTGTGGAATCCACAAGCTTGCAGCCATTCCAGTCTGTaGTGGTTCTGCCTCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGARYSISKLVWNPQACSHSSL*WFCLTS Trigger: TGATGTGAGGCAGAACCATCACAGACTGGAATGGCT...GCAAGCTTGTGGATTCCACACCAGCTTTGAAATAGAATATCTGGCACCTAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR GCA 90 bp | TCTTTTGAACCTACTACACTTCTTTCCGCCATAGAATTCATCATCTTCGTACATCCACGGCCACTAGCCTaGCGTAGAACATGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SFEPTTLLSAIEFIIFVHPRPLA*RRTWRP Trigger: CGGCCTCCATGTTCTACGGCAGGCTAGTGGCCGTGG...ATGTACGAAGATGATGAATTCTATGGCGGAAAGAAGTGTAGTAGGTTCAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647361.1 |
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| CDS-3UTR GCA 90 bp | CACTCTCAACTGATGAACTGCAGGCTCTCAACTGGTGGTCAATCAACTCCTTCATCTCAACTGATGAACTaGAGGCTCTCAACTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSQLMNCRLSTGGQSTPSSQLMN*RLSTGG Trigger: ACCACCAGTTGAGAGCCTGCAGTTCATCAGTTGAGA...TGAAGGAGTTGATTGACCACCAGTTGAGAGCCTGCAGTTCATCAGTTGAGAGTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493152.6 |
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| CDS-3UTR GCA 90 bp | GTGGTCAAAATGAAGGCTGGAGCTGATGTCATCCACACACTTCACTGGAACTGGAAGGACCTGTGCAATTaGCTTTTGGGACCTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VVKMKAGADVIHTLHWNWKDLCN*LLGPLL Trigger: CAACAAAGGTCCCAAAAGGCAATTGCACAGGTCCTT...CCAGTTCCAGTGAAGTGTGTGGATGACATCAGCTCCAGCCTTCATTTTGACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR GCA 90 bp | CTTGGAGGAAGAATAATTGACTGTACCGGGGTCAGTTGGAGAGGGTCTAGGAGTCCTTCTGCATTGGAGTaGTTTAGAAAGAAGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGGRIIDCTGVSWRGSRSPSALE*FRKKEA Trigger: GGCTTCCTTCTTTCTAAAGCACTCCAATGCAGAAGG...ACTCCTAGACCCTCTCCAACTGACCCCGGTACAGTCAATTATTCTTCCTCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CCA 90 bp | AAAAACAAGCTAGTTAACACACAGATTCAGCTTGTAAAACCTAATACCCTCGAAGGTGGTTCCGAAGGGTaGCCACGGCCACTAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KNKLVNTQIQLVKPNTLEGGSEG*PRPLAC Trigger: GCAGGCTAGTGGCCGTGGCCACCCTTCGGAACCACC...TTCGAGGGTATTAGGTTTTACAAGCTGAATCTGTGTGTTAACTAGCTTGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470760.2 |
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| CDS-3UTR CCA 90 bp | ACCACAGCGTTCATCGAATTCTTAAAATCATTCATAAACCACAGCTCTATTATGGGTGGTTCCGAAGGGTaGCCACGGCCACTAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TTAFIEFLKSFINHSSIMGGSEG*PRPLAC Trigger: GCAGGCTAGTGGCCGTGGCCACCCTTCGGAACCACC...CATAATAGAGCTGTGGTTTATGAATGATTTTAAGAATTCGATGAACGCTGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646602.1 |
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| CDS-3UTR CCA 90 bp | ACTCTGGAATTGTCACTCTCAACTGATGAACTGCAGGCTCTCAACTGGTGGTCACTCAGCTGGTCACTCTaGAATTGTCACTCTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TLELSLSTDELQALNWWSLSWSL*NCHSQL Trigger: CAGTTGAGAGTGACAATTCCAGAGTGACCAGCTGAG...TGACCACCAGTTGAGAGCCTGCAGTTCATCAGTTGAGAGTGACAATTCCAGAGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493152.6 |
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| CDS-3UTR TCA 90 bp | ATGAGGCAGAGACAGCAAGATTCTTACAGACAGACAGCTTCTAACACTGAGTCCTGGAGGAAGAATAATTaGCTGTACCGGGGTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MRQRQQDSYRQTASNTESWRKNN*LYRGQL Trigger: CAACTGACCCCGGTACAGTCAATTATTCTTCCTCCA...GGACTCAGTGTTAGAAGCTGTCTGTCTGTAAGAATCTTGCTGTCTCTGCCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR GCA 90 bp | GCTCTATTATGGAGATATATAAGACAGTGTCCCATCCATTCTACACAATTTACACCACGGCCACTAGCCTaGCGTAGAACATGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ALLWRYIRQCPIHSTQFTPRPLA*RRTWRP Trigger: CGGCCTCCATGTTCTACGGCAGGCTAGTGGCCGTGG...TGTAAATTGTGTAGAATGGATGGGACACTGTCTTATATATCTCCATAATAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644338.1 ENST00000646602.1 |
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| CDS-3UTR GCA 90 bp | ACCACAGCGTTCATCGAATTCTTAAAATCATTCATAAACCACAGCTCTATTATGCCACGGCCACTAGCCTaGCGTAGAACATGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TTAFIEFLKSFINHSSIMPRPLA*RRTWRP Trigger: CGGCCTCCATGTTCTACGGCAGGCTAGTGGCCGTGG...CATAATAGAGCTGTGGTTTATGAATGATTTTAAGAATTCGATGAACGCTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646602.1 |
||
| CDS-3UTR GCA 90 bp | CAGCTGGTCACTCTGGAATTGTCACTCTCAACTGATGAACTGCAGGCTCTCAACACATCCACATGTGCTTaGTTCGCTAAGGTCACTATT | + |
|
Preference number: 4 (lower is better) Translates to: QLVTLELSLSTDELQALNTSTCA*FAKVTI Trigger: AATAGTGACCTTAGCGAAGCAAGCACATGTGGATGT...GTTGAGAGCCTGCAGTTCATCAGTTGAGAGTGACAATTCCAGAGTGACCAGCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493152.6 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGGAAGAATAATTGACTGTACCGGGGTCAGTTGGAGAGGGTCTAGGAGTACTGGTTCTCATCACTaGAATTGTTTTCATGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGGRIIDCTGVSWRGSRSTGSHH*NCFHEA Trigger: TGCCTCATGAAAACAATTGCAGTGATGAGAACCAGT...ACTCCTAGACCCTCTCCAACTGACCCCGGTACAGTCAATTATTCTTCCTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| CDS-3UTR GCA 90 bp | TATCTTATGCTAACTGCTAGGTGCCAGATATTCTATTTCAAAGCTGGTGTGGAAGACAGCTCAACCACCTaGTCACCCAGAAGATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YLMLTARCQIFYFKAGVEDSSTT*SPRRWA Trigger: AGCCCATCTTCTGGGTGAGCAGGTGGTTGAGCTGTC...TTCCACACCAGCTTTGAAATAGAATATCTGGCACCTAGCAGTTAGCATAAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| 3UTR CAA 72 bp | TCCTTCATATTACATGCTCAGCTGGTCACTCTGGAATaGTCACTCTCAACTGATGAACTGCAGGCTCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFILHAQLVTLE*SLSTDELQALN Trigger: GTTGAGAGCCTGCAGTTCATCAGTTGAGAGTGACAATTCCAGAGTGACCAGCTGAGCATGTAATATGAAGGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493152.6 |
||
| CDS-3UTR CCA 90 bp | GCCTTGACTCACAAATGTCTGTTCCCATGGAACACTGGCTACATCACACTAATATGCTCACCCAGAAGATaGGCTGAAATGTGTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALTHKCLFPWNTGYITLICSPRR*AEMCDV Trigger: TACATCACACATTTCAGCCCATCTTCTGGGTGAGCA...TATTAGTGTGATGTAGCCAGTGTTCCATGGGAACAGACATTTGTGAGTCAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| CDS-3UTR CCA 90 bp | TCTTACAGACAGACAGCTTCTAACACTGAGTCCCAGAACACCTTCAGCCATCCAATTTCAAAGCTGGTGTaGAATCCACAAGCTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SYRQTASNTESQNTFSHPISKLV*NPQACF Trigger: AAAGCAAGCTTGTGGATTCCACACCAGCTTTGAAAT...TGGATGGCTGAAGGTGTTCTGGGACTCAGTGTTAGAAGCTGTCTGTCTGTAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| CDS-3UTR CCA 90 bp | GTTTTCCTTCTGCATTGGAGTGCTTTAGAAAGAAGGAAGCCAGTGCAAGGAAAGAATGACTCATCAGGCTaGGTTTTCCTTCTGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFLLHWSALERRKPVQGKNDSSG*VFLLHW Trigger: CCAATGCAGAAGGAAAACCCAGCCTGATGAGTCATT...CTTTCCTTGCACTGGCTTCCTTCTTTCTAAAGCACTCCAATGCAGAAGGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| CDS-3UTR CCA 90 bp | AAAACATTGATCCCTCCTCATGGTTTCCAAAAGTCAAGATGTATTGGTTATCCATGTACCGGGGTCAGTTaGAGAGGGTCTAGGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KTLIPPHGFQKSRCIGYPCTGVS*RGSRSG Trigger: ACCACTCCTAGACCCTCTCCAACTGACCCCGGTACA...TGGATAACCAATACATCTTGACTTTTGGAAACCATGAGGAGGGATCAATGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| CDS-3UTR TCA 90 bp | GCCTTGACTCACAAATGTCTGTTCCCATGGAACACTGGCTACATCACACTAATACTGCAATTGTTTTCATaGGGCAGAGACAGCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: ALTHKCLFPWNTGYITLILQLFS*GRDSKI Trigger: AATCTTGCTGTCTCTGCCTCATGAAAACAATTGCAG...TATTAGTGTGATGTAGCCAGTGTTCCATGGGAACAGACATTTGTGAGTCAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
||
| CDS-3UTR GCA 90 bp | GTTTTCCTTCTGCATTGGAGTGCTTTAGAAAGAAGGAAGCCAGTGCAAGGAAAGGTAAATAAGGACCTGTaGAATTGCCTTTTGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: VFLLHWSALERRKPVQGKVNKDL*NCLLGP Trigger: AGGTCCCAAAAGGCAATTGCACAGGTCCTTATTTAC...CTTTCCTTGCACTGGCTTCCTTCTTTCTAAAGCACTCCAATGCAGAAGGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CCA 90 bp | AGGCTGGGTTTTCCTTCTGCATTGGAGTGCTTTAGAAAGAAGGAAGCCAGTGCATATGCCATTAGTAACTaGTTCTCATCACTGCAATTG | + |
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Preference number: 4 (lower is better) Translates to: RLGFPSALECFRKKEASAYAISN*FSSLQL Trigger: CAATTGCAGTGATGAGAACCAGTTACTAATGGCATA...TGCACTGGCTTCCTTCTTTCTAAAGCACTCCAATGCAGAAGGAAAACCCAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CCA 90 bp | ATGAGGCAGAGACAGCAAGATTCTTACAGACAGACAGCTTCTAACACTGAGTCCTTAAGGTGGACATCATaGCTGGATAATGACTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: MRQRQQDSYRQTASNTESLRWTS*LDNDSS Trigger: TGATGAGTCATTATCCAGCCATGATGTCCACCTTAA...GGACTCAGTGTTAGAAGCTGTCTGTCTGTAAGAATCTTGCTGTCTCTGCCTCAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR GCA 90 bp | GTTTTCCTTCTGCATTGGAGTGCTTTAGAAAGAAGGAAGCCAGTGCAAGGAAAGTGCTTACATATTCAGTaGTCTTGCCTTGACTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VFLLHWSALERRKPVQGKCLHIQ*SCLDSQ Trigger: TTGTGAGTCAAGGCAAGAGCACTGAATATGTAAGCA...CTTTCCTTGCACTGGCTTCCTTCTTTCTAAAGCACTCCAATGCAGAAGGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CCA 90 bp | CTGCTAGGTGCCAGATATTCTATTTCAAAGCTGGTGTGGAATCCACAAGCTTGCATTCTATTTCAAAGCTaGTGTGGAATCCACAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLGARYSISKLVWNPQACILFQS*CGIHKL Trigger: AAGCTTGTGGATTCCACACCAGCTTTGAAATAGAAT...GCAAGCTTGTGGATTCCACACCAGCTTTGAAATAGAATATCTGGCACCTAGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CCA 90 bp | ATGAGGCAGAGACAGCAAGATTCTTACAGACAGACAGCTTCTAACACTGAGTCCAAAGGGACACTATTATaGGTATTATCTGCACCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MRQRQQDSYRQTASNTESKGTLL*VLSAPR Trigger: TCTAGGTGCAGATAATACCCATAATAGTGTCCCTTT...GGACTCAGTGTTAGAAGCTGTCTGTCTGTAAGAATCTTGCTGTCTCTGCCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR TCA 90 bp | ATTGGTTATCCATTGCAACATAACAAATGGCATGCAAAACAAATCACTACCCCACATGAGAGCACTGAGTaGCCGTCAATAGGTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IGYPLQHNKWHAKQITTPHESTE*PSIGEE Trigger: TTCTTCACCTATTGACGGTCACTCAGTGCTCTCATG...TGGGGTAGTGATTTGTTTTGCATGCCATTTGTTATGTTGCAATGGATAACCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR GCA 90 bp | TTTTATCTTATGCTAACTGCTAGGTGCCAGATATTCTATTTCAAAGCTGGTGTGGTGAGCCTCTCCTCATaGAGCTTGGATGTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FYLMLTARCQIFYFKAGVVSLSS*SLDVHF Trigger: AAAATGGACATCCAAGCTGCATGAGGAGAGGCTCAC...CACACCAGCTTTGAAATAGAATATCTGGCACCTAGCAGTTAGCATAAGATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CCA 90 bp | ATATATTATTTCCACTTTCGGAATTTAAAAGCAGCTTCAAGGGTGGTTCTGGCTGGTGGACATCATGGCTaGATAATGACTCATCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IYYFHFRNLKAASRVVLAGGHHG*IMTHQA Trigger: AGCCTGATGAGTCATTATCCAGCCATGATGTCCACC...AGCCAGAACCACCCTTGAAGCTGCTTTTAAATTCCGAAAGTGGAAATAATATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR TCA 90 bp | TCTTTTGAACCTACTACACTTCTTTCCGCCATAGAATTCATCATCTTCGTACATGCTTCTTATTACTTGTaGGTTCTGGTCCCAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFEPTTLLSAIEFIIFVHASYYL*VLVPEN Trigger: GTTCTCTGGGACCAGAACTCACAAGTAATAAGAAGC...ATGTACGAAGATGATGAATTCTATGGCGGAAAGAAGTGTAGTAGGTTCAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647361.1 |
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| CDS-3UTR CCA 90 bp | TCTTTTGAACCTACTACACTTCTTTCCGCCATAGAATTCATCATCTTCGTACATATTACTTGTGAGTTCTaGTCCCAGAGAACTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFEPTTLLSAIEFIIFVHITCEF*SQRTCQ Trigger: CTGGCAAGTTCTCTGGGACCAGAACTCACAAGTAAT...ATGTACGAAGATGATGAATTCTATGGCGGAAAGAAGTGTAGTAGGTTCAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647361.1 |
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| CDS-3UTR GCA 90 bp | AAAACATTGATCCCTCCTCATGGTTTCCAAAAGTCAAGATGTATTGGTTATCCAACATCCACATGTGCTTaGTTCGCTAAGGTCACTATT | + |
|
Preference number: 4 (lower is better) Translates to: KTLIPPHGFQKSRCIGYPTSTCA*FAKVTI Trigger: AATAGTGACCTTAGCGAAGCAAGCACATGTGGATGT...TGGATAACCAATACATCTTGACTTTTGGAAACCATGAGGAGGGATCAATGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR GCA 90 bp | TCTTTTGAACCTACTACACTTCTTTCCGCCATAGAATTCATCATCTTCGTACATACATCCACATGTGCTTaGTTCGCTAAGGTCACTATT | + |
|
Preference number: 4 (lower is better) Translates to: SFEPTTLLSAIEFIIFVHTSTCA*FAKVTI Trigger: AATAGTGACCTTAGCGAAGCAAGCACATGTGGATGT...ATGTACGAAGATGATGAATTCTATGGCGGAAAGAAGTGTAGTAGGTTCAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647361.1 |
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| CDS-3UTR CCA 90 bp | AGTGTCCCATCCATTCTACACAATTTACAGAAAATAAAGGGGACACAGGAATATAAACCCCATCTCTACTaGAGAGCTTGTTCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVPSILHNLQKIKGTQEYKPHLY*RACSFL Trigger: CAAAAAGGAACAAGCTCTCCAGTAGAGATGGGGTTT...ATATTCCTGTGTCCCCTTTATTTTCTGTAAATTGTGTAGAATGGATGGGACACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000644338.1 |
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| CDS-3UTR CCA 90 bp | TGTTTAATGGCAGTGATGGTGATGATGATGATGATGATAGCAATAACATATGGCTCTCCTCATGCAGCTTaGATGTCCATTTTTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLMAVMVMMMMMIAITYGSPHAA*MSIFDA Trigger: AGCATCAAAAATGGACATCCAAGCTGCATGAGGAGA...GCCATATGTTATTGCTATCATCATCATCATCATCACCATCACTGCCATTAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CCA 90 bp | ATTGGTTATCCATTGCAACATAACAAATGGCATGCAAAACAAATCACTACCCCAAAATGTCTGTTCCCATaGAACACTGGCTACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: IGYPLQHNKWHAKQITTPKCLFP*NTGYIT Trigger: TGTGATGTAGCCAGTGTTCCATGGGAACAGACATTT...TGGGGTAGTGATTTGTTTTGCATGCCATTTGTTATGTTGCAATGGATAACCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| 3UTR CAA 72 bp | GAAAAATCAGTAAATAAGGACCTGTGCAATTGCCTTTaGGGACCTTTGTTGATTTCTCTCATTCAAAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: EKSVNKDLCNCL*GPLLISLIQRD Trigger: GTCCCTTTGAATGAGAGAAATCAACAAAGGTCCCAAAAGGCAATTGCACAGGTCCTTATTTACTGATTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR GCA 90 bp | ATTGGTTATCCATTGCAACATAACAAATGGCATGCAAAACAAATCACTACCCCACATATTCAGTGCTCTTaGCTTGACTCACAAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IGYPLQHNKWHAKQITTPHIQCS*LDSQMS Trigger: AGACATTTGTGAGTCAAGGCAAGAGCACTGAATATG...TGGGGTAGTGATTTGTTTTGCATGCCATTTGTTATGTTGCAATGGATAACCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CCA 90 bp | TGTTTAATGGCAGTGATGGTGATGATGATGATGATGATAGCAATAACATATGGCATTGATCCCTCCTCATaGTTTCCAAAAGTCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: CLMAVMVMMMMMIAITYGIDPSS*FPKVKM Trigger: CATCTTGACTTTTGGAAACCATGAGGAGGGATCAAT...GCCATATGTTATTGCTATCATCATCATCATCATCACCATCACTGCCATTAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CCA 90 bp | ATATATTATTTCCACTTTCGGAATTTAAAAGCAGCTTCAAGGGTGGTTCTGGCTTTTGGAAGGTTAAGGTaGACATCATGGCTGGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: IYYFHFRNLKAASRVVLAFGRLR*TSWLDN Trigger: ATTATCCAGCCATGATGTCCACCTTAACCTTCCAAA...AGCCAGAACCACCCTTGAAGCTGCTTTTAAATTCCGAAAGTGGAAATAATATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CCA 90 bp | ATATTATTTCCACTTTCGGAATTTAAAAGCAGCTTCAAGGGTGGTTCTGGCTTAGTTCCCATGGAACACTaGCTACATCACACTAATATA | + |
|
Preference number: 4 (lower is better) Translates to: ILFPLSEFKSSFKGGSGLVPMEH*LHHTNI Trigger: TATATTAGTGTGATGTAGCCAGTGTTCCATGGGAAC...TAAGCCAGAACCACCCTTGAAGCTGCTTTTAAATTCCGAAAGTGGAAATAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CCA 90 bp | AGCTCTATTATGGAGATATATAAGACAGTGTCCCATCCATTCTACACAATTTACCTTCAACAACTGAACTaGAGAGCTTGTTCCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSIMEIYKTVSHPFYTIYLQQLN*RACSFL Trigger: CAAAAAGGAACAAGCTCTCCAGTTCAGTTGTTGAAG...GTAAATTGTGTAGAATGGATGGGACACTGTCTTATATATCTCCATAATAGAGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646602.1 |
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| CDS-3UTR GCA 90 bp | AAAACATTGATCCCTCCTCATGGTTTCCAAAAGTCAAGATGTATTGGTTATCCAGTATTGGTTATCCATTaGAACATAACAAATGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KTLIPPHGFQKSRCIGYPVLVIH*NITNGM Trigger: CATGCCATTTGTTATGTTGCAATGGATAACCAATAC...TGGATAACCAATACATCTTGACTTTTGGAAACCATGAGGAGGGATCAATGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CCA 90 bp | AGTGTCCCATCCATTCTACACAATTTACAGAAAATAAAGGGGACACAGGAATATACCACAGCTCTATTATaGAGATATATAAGACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVPSILHNLQKIKGTQEYTTALL*RYIRQC Trigger: ACACTGTCTTATATATCTCCATAATAGAGCTGTGGT...ATATTCCTGTGTCCCCTTTATTTTCTGTAAATTGTGTAGAATGGATGGGACACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000644338.1 ENST00000646602.1 |
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| CDS TCA 90 bp | GCGCGTCACTTCCTGCCGCTGCCAGGCGCGTCCTCCCGCGCGCTATaGCGGCCAGCGCACAGCCGCGCGGGCGGCGGCCAGGAGTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARHFLPLPGASSRAL*RPAHSRAGGGQESE Trigger: CTCCGACTCCTGGCCGCCGCCCGCGCGGCTGTGCGCTGGCCGTCATAGCGCGCGGGAGGACGCGCCTGGCAGCGGCAGGAAGTGACGCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643246.1 ENST00000646804.1 |
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| CDS GCA 90 bp | GCTGCGGCCGCGGGACGGGGTAGTGAGCGCGTCACTTCCTGCCGCTaGCAGGCGCGTCCTCCCGCGCGCTATGACGGCCAGCGCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAAAGRGSERVTSCR*QARPPARYDGQRTA Trigger: GGCTGTGCGCTGGCCGTCATAGCGCGCGGGAGGACGCGCCTGGCAGCGGCAGGAAGTGACGCGCTCACTACCCCGTCCCGCGGCCGCAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643246.1 ENST00000646804.1 |
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| CDS GCA 90 bp | AGATTGGCTGCGGCCGCGGGACGGGGTAGTGAGCGCGTCACTTCCTaGCGCTGCCAGGCGCGTCCTCCCGCGCGCTATGACGGCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RLAAAAGRGSERVTS*RCQARPPARYDGQR Trigger: GCGCTGGCCGTCATAGCGCGCGGGAGGACGCGCCTGGCAGCGGCAGGAAGTGACGCGCTCACTACCCCGTCCCGCGGCCGCAGCCAATCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643246.1 ENST00000646804.1 |
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| CDS TCA 90 bp | GAGCAAGACCCGCGGACAGCTGGAGAGGCCGAGGCGCTCTCGCTTTaGTTTCGGCGCCTCCGCCCTCGCGGGGAGAGATTGGCTGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EQDPRTAGEAEALSL*FRRLRPRGERLAAA Trigger: GGCCGCAGCCAATCTCTCCCCGCGAGGGCGGAGGCGCCGAAATCAAAGCGAGAGCGCCTCGGCCTCTCCAGCTGTCCGCGGGTCTTGCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643246.1 |
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| CDS CCA 90 bp | CGCTCTCGCTTTGATTTCGGCGCCTCCGCCCTCGCGGGGAGAGATTaGCTGCGGCCGCGGGACGGGGTAGTGAGCGCGTCACTTCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSRFDFGASALAGRD*LRPRDGVVSASLPA Trigger: GGCAGGAAGTGACGCGCTCACTACCCCGTCCCGCGGCCGCAGCCAATCTCTCCCCGCGAGGGCGGAGGCGCCGAAATCAAAGCGAGAGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000643246.1 ENST00000646804.1 |
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| CDS TCA 90 bp | TTCCCAGAACCGCGGACAGCTGGAGAGGCCGAGGCGCTCTCGCTTTaGTTTCGGCGCCTCCGCCCTCGCGGGGAGAGATTGGCTGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FPEPRTAGEAEALSL*FRRLRPRGERLAAA Trigger: GGCCGCAGCCAATCTCTCCCCGCGAGGGCGGAGGCGCCGAAATCAAAGCGAGAGCGCCTCGGCCTCTCCAGCTGTCCGCGGTTCTGGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646804.1 |
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| CDS GCA 90 bp | AATCCAGAACTTCCCAGAACCTGCTCCCGCCCATCTCTTAGAAACTaGAGGAGCAGCCACGGCCGGGCCGCCGGGGATCCTCGCGGACTA | + |
|
Preference number: 5 (lower is better) Translates to: NPELPRTCSRPSLRN*RSSHGRAAGDPRGL Trigger: TAGTCCGCGAGGATCCCCGGCGGCCCGGCCGTGGCTGCTCCTGCAGTTTCTAAGAGATGGGCGGGAGCAGGTTCTGGGAAGTTCTGGATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642944.1 |
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| CDS CCA 90 bp | CAGGGGAAGGAGCAACCTGGCTGTCCAGGTGCACAGGCAGAAAGCTaGCATTTGGCAGCCTTCCAGCAGGCTGTGGGGCTCACAAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QGKEQPGCPGAQAES*HLAAFQQAVGLTSQ Trigger: TTGACTTGTGAGCCCCACAGCCTGCTGGAAGGCTGCCAAATGCCAGCTTTCTGCCTGTGCACCTGGACAGCCAGGTTGCTCCTTCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS CCA 90 bp | AGGAGCAACCTGGCTGTCCAGGTGCACAGGCAGAAAGCTGGCATTTaGCAGCCTTCCAGCAGGCTGTGGGGCTCACAAGTCAAAGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RSNLAVQVHRQKAGI*QPSSRLWGSQVKVG Trigger: ACCCACTTTGACTTGTGAGCCCCACAGCCTGCTGGAAGGCTGCCAAATGCCAGCTTTCTGCCTGTGCACCTGGACAGCCAGGTTGCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS CCA 90 bp | ACAGAGCGACAGACTTCGGTTCCAGGATCAGGGGAAGGAGCAACCTaGCTGTCCAGGTGCACAGGCAGAAAGCTGGCATTTGGCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TERQTSVPGSGEGAT*LSRCTGRKLAFGSL Trigger: AAGGCTGCCAAATGCCAGCTTTCTGCCTGTGCACCTGGACAGCCAGGTTGCTCCTTCCCCTGATCCTGGAACCGAAGTCTGTCGCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS GCA 90 bp | TCGCTGCTGCAAACCTCGGTTTCCCCCTACGTGAGCCTCTCCTCATaGAGCTTGGATGTCCGCTGCCAACCAGACGTCTTCCTTATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLLQTSVSPYVSLSS*SLDVRCQPDVFLID Trigger: GTCTATAAGGAAGACGTCTGGTTGGCAGCGGACATCCAAGCTGCATGAGGAGAGGCTCACGTAGGGGGAAACCGAGGTTTGCAGCAGCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS GCA 90 bp | GTTTCCCCCTACGTGAGCCTCTCCTCATGCAGCTTGGATGTCCGCTaGCAACCAGACGTCTTCCTTATAGACCCGCCTCCTCTTTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSPYVSLSSCSLDVR*QPDVFLIDPPPLCL Trigger: AAGACAAAGAGGAGGCGGGTCTATAAGGAAGACGTCTGGTTGGCAGCGGACATCCAAGCTGCATGAGGAGAGGCTCACGTAGGGGGAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS-3UTR CAA 90 bp | GTGGTCAAAATGAAGGCTGGAGCTGATGTCATCCACACACTTCACTGGAACTGGTTGGGTCGAGCCCTCTaGAAGAGGATGGGCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVKMKAGADVIHTLHWNWLGRAL*KRMGIS Trigger: GGAAATGCCCATCCTCTTCAAGAGGGCTCGACCCAA...CCAGTTCCAGTGAAGTGTGTGGATGACATCAGCTCCAGCCTTCATTTTGACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS GCA 90 bp | CCAACCAGACGTCTTCCTTATAGACCCGCCTCCTCTTTGTCTTCCTaGCAGTCACTGCTGCTCTGGCTGGAAATAGATGTGTCAAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PTRRLPYRPASSLSS*QSLLLWLEIDVSSC Trigger: ACAACTTGACACATCTATTTCCAGCCAGAGCAGCAGTGACTGGCAGGAAGACAAAGAGGAGGCGGGTCTATAAGGAAGACGTCTGGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS CCA 90 bp | TATAGACCCGCCTCCTCTTTGTCTTCCTGCCAGTCACTGCTGCTCTaGCTGGAAATAGATGTGTCAAGTTGTTCTCTAGATTTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: YRPASSLSSCQSLLL*LEIDVSSCSLDFRS Trigger: GGACCTGAAATCTAGAGAACAACTTGACACATCTATTTCCAGCCAGAGCAGCAGTGACTGGCAGGAAGACAAAGAGGAGGCGGGTCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS-3UTR CAA 90 bp | AGCAAGATTCTTACAGACAGACAGCTTCTAACACTGAGTCCCAGAACACCTTCAGAGCTGATTCCTTACTaGGGTCGAGCCCTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SKILTDRQLLTLSPRTPSELIPY*GRALLK Trigger: CTTCAAGAGGGCTCGACCCAAGTAAGGAATCAGCTC...TGAAGGTGTTCTGGGACTCAGTGTTAGAAGCTGTCTGTCTGTAAGAATCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS GCA 90 bp | GTCTTCCCACAGCTGCCTCCTTATGTTACTTCTCTATCCAAGTCTTaGACGGATGTATCTGACTGGAAGTACCTGAATCGCATTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VFPQLPPYVTSLSKS*TDVSDWKYLNRILP Trigger: TGGAAGAATGCGATTCAGGTACTTCCAGTCAGATACATCCGTGCAAGACTTGGATAGAGAAGTAACATAAGGAGGCAGCTGTGGGAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS-3UTR CAA 90 bp | AGCAAGATTCTTACAGACAGACAGCTTCTAACACTGAGTCCCAGAACACCTTCATCTGAAGGTCCAGCCTaGTACAGAAGGACAAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: SKILTDRQLLTLSPRTPSSEGPA*YRRTKP Trigger: GGGTTTTGTCCTTCTGTACAAGGCTGGACCTTCAGA...TGAAGGTGTTCTGGGACTCAGTGTTAGAAGCTGTCTGTCTGTAAGAATCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CAA 90 bp | GTGGTCAAAATGAAGGCTGGAGCTGATGTCATCCACACACTTCACTGGAACTGGTGCCTTTTGGGACCTTaGTTGATTTCTCTCATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: VVKMKAGADVIHTLHWNWCLLGP*LISLIQ Trigger: TTGAATGAGAGAAATCAACAAAGGTCCCAAAAGGCA...CCAGTTCCAGTGAAGTGTGTGGATGACATCAGCTCCAGCCTTCATTTTGACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CAA 90 bp | AATTGTCACTCTCAACTGATGAACTGCAGGCTCTCAACTGGTGGTCAATCAACTCTGGTCACTCTGGAATaGTCACTCTCAACTGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: NCHSQLMNCRLSTGGQSTLVTLE*SLSTDE Trigger: TTCATCAGTTGAGAGTGACAATTCCAGAGTGACCAG...AGTTGATTGACCACCAGTTGAGAGCCTGCAGTTCATCAGTTGAGAGTGACAATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493152.6 |
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| CDS-3UTR CAA 90 bp | AGCAAGATTCTTACAGACAGACAGCTTCTAACACTGAGTCCCAGAACACCTTCATTCAGTGCTCTTGCCTaGACTCACAAATGTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKILTDRQLLTLSPRTPSFSALA*THKCLF Trigger: GAACAGACATTTGTGAGTCAAGGCAAGAGCACTGAA...TGAAGGTGTTCTGGGACTCAGTGTTAGAAGCTGTCTGTCTGTAAGAATCTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS GCA 90 bp | AGTTCAATTTTTCTACAAATAAGCAAGGATAACTTTGACAGGCGCTaGAACACTCTCTGTCATGGTTTCAACAGATCTCTTTCCTACCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSIFLQISKDNFDRR*NTLCHGFNRSLSYL Trigger: GAGGTAGGAAAGAGATCTGTTGAAACCATGACAGAGAGTGTTGCAGCGCCTGTCAAAGTTATCCTTGCTTATTTGTAGAAAAATTGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS CCA 90 bp | ATAGATGTGTCAAGTTGTTCTCTAGATTTCAGGTCCTTTAGCATATaGGACAAGGTCATCCTTCTTTCTCAGTCATACAGGCAGTATAAT | + |
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Preference number: 5 (lower is better) Translates to: IDVSSCSLDFRSFSI*DKVILLSQSYRQYN Trigger: ATTATACTGCCTGTATGACTGAGAAAGAAGGATGACCTTGTCCCATATGCTAAAGGACCTGAAATCTAGAGAACAACTTGACACATCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS-3UTR CAA 90 bp | TGTTTAATGGCAGTGATGGTGATGATGATGATGATGATAGCAATAACATATGGCGGTTTTCCTTCTGCATaGGAGTGCTTTAGAAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: CLMAVMVMMMMMIAITYGGFPSA*ECFRKK Trigger: CTTCTTTCTAAAGCACTCCAATGCAGAAGGAAAACC...GCCATATGTTATTGCTATCATCATCATCATCATCACCATCACTGCCATTAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643584.1 |
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| CDS-3UTR CAA 90 bp | TCTTTTGAACCTACTACACTTCTTTCCGCCATAGAATTCATCATCTTCGTACATCAGAATCATGAAGACTaGCAGTTAATCAGTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SFEPTTLLSAIEFIIFVHQNHED*QLISVS Trigger: GGAAACACTGATTAACTGCAAGTCTTCATGATTCTG...ATGTACGAAGATGATGAATTCTATGGCGGAAAGAAGTGTAGTAGGTTCAAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647361.1 |
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| CDS TCA 72 bp | TTCCTGCCGCTGCCAGGCGCGTCCTCCCGCGCGCTATaGCGGCCAGCGCACAGCCGCGCGGGCGGCGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: FLPLPGASSRAL*RPAHSRAGGGQ Trigger: CTGGCCGCCGCCCGCGCGGCTGTGCGCTGGCCGTCATAGCGCGCGGGAGGACGCGCCTGGCAGCGGCAGGAA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643246.1 ENST00000646804.1 |
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| CDS GCA 72 bp | GCGGCCGCGGGACGGGGTAGTGAGCGCGTCACTTCCTaGCGCTGCCAGGCGCGTCCTCCCGCGCGCTATGAC | + |
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Preference number: 6 (lower is better) Translates to: AAAGRGSERVTS*RCQARPPARYD Trigger: GTCATAGCGCGCGGGAGGACGCGCCTGGCAGCGGCAGGAAGTGACGCGCTCACTACCCCGTCCCGCGGCCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643246.1 ENST00000646804.1 |
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| CDS GCA 72 bp | GCGGGACGGGGTAGTGAGCGCGTCACTTCCTGCCGCTaGCAGGCGCGTCCTCCCGCGCGCTATGACGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: AGRGSERVTSCR*QARPPARYDGQ Trigger: CTGGCCGTCATAGCGCGCGGGAGGACGCGCCTGGCAGCGGCAGGAAGTGACGCGCTCACTACCCCGTCCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643246.1 ENST00000646804.1 |
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| CDS CAA 90 bp | AGAGCAAGACCCGCGGACAGCTGGAGAGGCCGAGGCGCTCTCGCTTaGATTTCGGCGCCTCCGCCCTCGCGGGGAGAGATTGGCTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: RARPADSWRGRGALA*ISAPPPSRGEIGCG Trigger: GCCGCAGCCAATCTCTCCCCGCGAGGGCGGAGGCGCCGAAATCAAAGCGAGAGCGCCTCGGCCTCTCCAGCTGTCCGCGGGTCTTGCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643246.1 |
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| CDS CAA 90 bp | CTTCCCAGAACCGCGGACAGCTGGAGAGGCCGAGGCGCTCTCGCTTaGATTTCGGCGCCTCCGCCCTCGCGGGGAGAGATTGGCTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: LPRTADSWRGRGALA*ISAPPPSRGEIGCG Trigger: GCCGCAGCCAATCTCTCCCCGCGAGGGCGGAGGCGCCGAAATCAAAGCGAGAGCGCCTCGGCCTCTCCAGCTGTCCGCGGTTCTGGGAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646804.1 |
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| CDS CCA 72 bp | TTTGATTTCGGCGCCTCCGCCCTCGCGGGGAGAGATTaGCTGCGGCCGCGGGACGGGGTAGTGAGCGCGTCA | + |
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Preference number: 6 (lower is better) Translates to: FDFGASALAGRD*LRPRDGVVSAS Trigger: TGACGCGCTCACTACCCCGTCCCGCGGCCGCAGCCAATCTCTCCCCGCGAGGGCGGAGGCGCCGAAATCAAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000643246.1 ENST00000646804.1 |
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| CDS CCA 72 bp | AGCCTTCCAGCAGGCTGTGGGGCTCACAAGTCAAAGTaGGTCCTGGGGAGGCGCCAGATGGTCAGTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: SLPAGCGAHKSK*VLGRRQMVSLP Trigger: GGGAAGACTGACCATCTGGCGCCTCCCCAGGACCCACTTTGACTTGTGAGCCCCACAGCCTGCTGGAAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS CCA 72 bp | GAGCAACCTGGCTGTCCAGGTGCACAGGCAGAAAGCTaGCATTTGGCAGCCTTCCAGCAGGCTGTGGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: EQPGCPGAQAES*HLAAFQQAVGL Trigger: GAGCCCCACAGCCTGCTGGAAGGCTGCCAAATGCCAGCTTTCTGCCTGTGCACCTGGACAGCCAGGTTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS CCA 72 bp | CTGGCTGTCCAGGTGCACAGGCAGAAAGCTGGCATTTaGCAGCCTTCCAGCAGGCTGTGGGGCTCACAAGTC | + |
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Preference number: 6 (lower is better) Translates to: LAVQVHRQKAGI*QPSSRLWGSQV Trigger: GACTTGTGAGCCCCACAGCCTGCTGGAAGGCTGCCAAATGCCAGCTTTCTGCCTGTGCACCTGGACAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS CAA 90 bp | AAGGAGCAACCTGGCTGTCCAGGTGCACAGGCAGAAAGCTGGCATTaGGCAGCCTTCCAGCAGGCTGTGGGGCTCACAAGTCAAAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: KEQPGCPGAQAESWH*AAFQQAVGLTSQSG Trigger: CCCACTTTGACTTGTGAGCCCCACAGCCTGCTGGAAGGCTGCCAAATGCCAGCTTTCTGCCTGTGCACCTGGACAGCCAGGTTGCTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS GCA 72 bp | CAAACCTCGGTTTCCCCCTACGTGAGCCTCTCCTCATaGAGCTTGGATGTCCGCTGCCAACCAGACGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: QTSVSPYVSLSS*SLDVRCQPDVF Trigger: GAAGACGTCTGGTTGGCAGCGGACATCCAAGCTGCATGAGGAGAGGCTCACGTAGGGGGAAACCGAGGTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS CAA 90 bp | TGTCCGCTGCCAACCAGACGTCTTCCTTATAGACCCGCCTCCTCTTaGTCTTCCTGCCAGTCACTGCTGCTCTGGCTGGAAATAGATGTG | + |
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Preference number: 6 (lower is better) Translates to: CPLPTRRLPYRPASS*SSCQSLLLWLEIDV Trigger: CACATCTATTTCCAGCCAGAGCAGCAGTGACTGGCAGGAAGACAAAGAGGAGGCGGGTCTATAAGGAAGACGTCTGGTTGGCAGCGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS GCA 72 bp | CGTCTTCCTTATAGACCCGCCTCCTCTTTGTCTTCCTaGCAGTCACTGCTGCTCTGGCTGGAAATAGATGTG | + |
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Preference number: 6 (lower is better) Translates to: RLPYRPASSLSS*QSLLLWLEIDV Trigger: CACATCTATTTCCAGCCAGAGCAGCAGTGACTGGCAGGAAGACAAAGAGGAGGCGGGTCTATAAGGAAGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS CCA 72 bp | TACCCAAAAGACAAAAGGCTGCAGACAGTCTACATCTaGAGGACAGAGCGACAGACTTCGGTTCCAGGATCA | + |
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Preference number: 6 (lower is better) Translates to: YPKDKRLQTVYI*RTERQTSVPGS Trigger: TGATCCTGGAACCGAAGTCTGTCGCTCTGTCCTCCAGATGTAGACTGTCTGCAGCCTTTTGTCTTTTGGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS GCA 72 bp | ACCATCCTGCTCCAAGTGGAATGTGAACCATCTCTTTaGCCAGCGTATCCACGCTGTATAAACTACTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: TILLQVECEPSL*PAYPRCINYSS Trigger: GGAAGAGTAGTTTATACAGCGTGGATACGCTGGGCAAAGAGATGGTTCACATTCCACTTGGAGCAGGATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481279.2 |
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| CDS GCA 72 bp | TCTACAACAGGTCCGGCAGCAGGGAAACAAAGGTACTaGACGTTCCATCCAGATGATTCAGCAAAAAGTACC | + |
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Preference number: 6 (lower is better) Translates to: STTGPAAGKQRY*TFHPDDSAKST Trigger: GGTACTTTTTGCTGAATCATCTGGATGGAACGTGCAGTACCTTTGTTTCCCTGCTGCCGGACCTGTTGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS CAA 90 bp | TGTCTGGTTGCAAGTCAGGAACAAAGAGCTTCAGAGACTGGCGCTTaGAGCAGCATTCTGCTAAGCCATAAAAAGATATCTCCTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: CLVASQEQRASETGA*SSILLSHKKISPPA Trigger: TGCAGGAGGAGATATCTTTTTATGGCTTAGCAGAATGCTGCTCAAAGCGCCAGTCTCTGAAGCTCTTTGTTCCTGACTTGCAACCAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS GCA 72 bp | CAGCTGCCTCCTTATGTTACTTCTCTATCCAAGTCTTaGACGGATGTATCTGACTGGAAGTACCTGAATCGC | + |
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Preference number: 6 (lower is better) Translates to: QLPPYVTSLSKS*TDVSDWKYLNR Trigger: GCGATTCAGGTACTTCCAGTCAGATACATCCGTGCAAGACTTGGATAGAGAAGTAACATAAGGAGGCAGCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS GCA 72 bp | TGGTCACTCTGGAATTGTCACTCTCAACTGATGAACTaGAGGCTCTCAACTGGTGGTCAATCAACTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: WSLWNCHSQLMN*RLSTGGQSTPK Trigger: TTTTGGAGTTGATTGACCACCAGTTGAGAGCCTGCAGTTCATCAGTTGAGAGTGACAATTCCAGAGTGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484941.2 |
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| CDS CAA 72 bp | GCAAGTCAGGAACAAAGAGCTTCAGAGACTGGCGCTTaGAGCAGCATTCTGCTAAGCCATAAAAAGATATCT | + |
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Preference number: 6 (lower is better) Translates to: ASQEQRASETGA*SSILLSHKKIS Trigger: AGATATCTTTTTATGGCTTAGCAGAATGCTGCTCAAAGCGCCAGTCTCTGAAGCTCTTTGTTCCTGACTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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| CDS CAA 72 bp | AACAAGCGTCTGGGAGAGTTCCTAGCACATAATATTTaGCTGCTTCTTATTACTTGTGAGTTCTGGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: NKRLGEFLAHNI*LLLITCEFWSQ Trigger: CTGGGACCAGAACTCACAAGTAATAAGAAGCAGCAAAATATTATGTGCTAGGAACTCTCCCAGACGCTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647361.1 |
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| CDS CAA 90 bp | CATCTTCGTACATATGTAATTCTCTTACATATATCATTTGTTGTTTaGCTTCCCCATCAGAAAAGAGGCCCAGGAGGGCAGAATCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: HLRTYVILLHISFVV*LPHQKRGPGGQNLC Trigger: ACAAAGATTCTGCCCTCCTGGGCCTCTTTTCTGATGGGGAAGCAAAACAACAAATGATATATGTAAGAGAATTACATATGTACGAAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647361.1 |
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| CDS TCA 72 bp | ATAAGTAAATGGTGTTTGGGAAACAGATTAGGCATTTaGGAGGGGAAATTTGCATTCATAACTCAAGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ISKWCLGNRLGI*EGKFAFITQVQ Trigger: CTGAACTTGAGTTATGAATGCAAATTTCCCCTCTCAAATGCCTAATCTGTTTCCCAAACACCATTTACTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647008.1 |
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