RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STYXL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000127952

Ensembl transcript IDs: ENST00000248600.5, ENST00000340062.9, ENST00000359697.8, ENST00000360591.7, ENST00000430497.5, ENST00000431581.5, ENST00000438695.5, ENST00000451157.1, ENST00000454618.5, ENST00000460184.2, ENST00000474328.5

Found 391 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATaGCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAG +
Preference number: 1 (lower is better)
Translates to: PDKPGYTHSGPPPTK*PQVRLFSTLRWASE
Trigger: CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
3UTR TCA 90 bp CTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTaGGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGATCAGTA +
Preference number: 1 (lower is better)
Translates to: LGIHTLALHPQNAPR*GSSVPFGGPRRRSV
Trigger: TACTGATCTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
3UTR CCA 90 bp CAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTaGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTAC +
Preference number: 1 (lower is better)
Translates to: QQRPSPSRQAWVYTL*PSTHKMPPGEALQY
Trigger: GTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
3UTR CCA 90 bp CATGAGACTTTCAGGCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTaGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGT +
Preference number: 1 (lower is better)
Translates to: HETFRQQRPSPSRQA*VYTLWPSTHKMPPG
Trigger: ACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGCCTGAAAGTCTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000360591.7
3UTR CCA 90 bp GATAGTCTTCTCCCATTCCAGCAGCTGGCTCACCAATCCCCGATTTaGACACATGTTGTTTTTGCACTTCTTGACATAGGCCCAGGACCT +
Preference number: 1 (lower is better)
Translates to: DSLLPFQQLAHQSPI*THVVFALLDIGPGP
Trigger: AGGTCCTGGGCCTATGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGAGAAGACTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
3UTR-3UTR CCA 90 bp CACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCCTTCCAGACAAGCCTaGGTATACACACTCTGGCCC +
Preference number: 2 (lower is better)
Translates to: HSGPPPTKCPQVRLFSTLPSRQA*VYTLWP
Trigger: GGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGG...AAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
3UTR-3UTR TCA 90 bp CACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTTTGGGGTCACAGGCTTaGCTGAAATTGCCAACGAAG +
Preference number: 2 (lower is better)
Translates to: HSGPPPTKCPQVRLFSTLLGSQA*LKLPTK
Trigger: CTTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAA...AAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
3UTR-3UTR TCA 90 bp GAATCTCCAAGGATAGTCTTCTCCCATTCCAGCAGCTGGCTCACCAATCCCCGACAAAATGCCCCCAGGTaGGGCTCTTCAGTACCCTTC +
Preference number: 2 (lower is better)
Translates to: ESPRIVFSHSSSWLTNPRQNAPR*GSSVPF
Trigger: GAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTG...TCGGGGATTGGTGAGCCAGCTGCTGGAATGGGAGAAGACTATCCTTGGAGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
3UTR-3UTR GCA 90 bp ACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCTCTTCTATCCGGATGTaGAGAAGCTTGTCAGCATCG +
Preference number: 2 (lower is better)
Translates to: THSGPPPTKCPQVRLFSTSSIRM*RSLSAS
Trigger: CGATGCTGACAAGCTTCTGCACATCCGGATAGAAGA...GGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
3UTR-3UTR TCA 90 bp CCAAGGATAGTCTTCTCCCATTCCAGCAGCTGGCTCACCAATCCCCGATTTGGATTGGGGTCACAGGCTTaGCTGAAATTGCCAACGAAG +
Preference number: 2 (lower is better)
Translates to: PRIVFSHSSSWLTNPRFGLGSQA*LKLPTK
Trigger: CTTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAA...TCCAAATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGAGAAGACTATCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
3UTR-3UTR TCA 90 bp GAAGAATCTGGGCTTCCGGGGAATCTTCTATCCGGATGTGCAGAAGCTTGTCAGGGTCACAGGCTTGACTaGAATTGCCAACGAAGACCT +
Preference number: 2 (lower is better)
Translates to: EESGLPGNLLSGCAEACQGHRLD*NCQRRP
Trigger: AGGTCTTCGTTGGCAATTTCAGTCAAGCCTGTGACC...CTGACAAGCTTCTGCACATCCGGATAGAAGATTCCCCGGAAGCCCAGATTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
3UTR-3UTR TCA 90 bp CTGGCTCACCAATCCCCGATTTGGACACATGTTGTTTTTGCACTTCTTGACATAGGTCACAGGCTTGACTaGAATTGCCAACGAAGACCT +
Preference number: 2 (lower is better)
Translates to: LAHQSPIWTHVVFALLDIGHRLD*NCQRRP
Trigger: AGGTCTTCGTTGGCAATTTCAGTCAAGCCTGTGACC...TATGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCGGGGATTGGTGAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
3UTR-3UTR TCA 90 bp CTGGCTCACCAATCCCCGATTTGGACACATGTTGTTTTTGCACTTCTTGACATAAGGACCTCAATGAAGTaGCACATGTGGCGTAAGAAG +
Preference number: 2 (lower is better)
Translates to: LAHQSPIWTHVVFALLDIRTSMK*HMWRKK
Trigger: CTTCTTACGCCACATGTGTCACTTCATTGAGGTCCT...TATGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCGGGGATTGGTGAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430497.5
3UTR-3UTR CCA 90 bp TTCTCCCATTCCAGCAGCTGGCTCACCAATCCCCGATTTGGACACATGTTGTTTATGGAGACATTGACATaGGCTTTGATTTTCAAGTCC +
Preference number: 2 (lower is better)
Translates to: FSHSSSWLTNPRFGHMLFMETLT*ALIFKS
Trigger: GGACTTGAAAATCAAAGCCCATGTCAATGTCTCCAT...AAACAACATGTGTCCAAATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
3UTR-3UTR CCA 90 bp ATATTCATATCCACAAATGTGATTGATCAATTCCTTGAAAGACACAGACTGCCAGCTGAGGCAGAAGAATaGCATGAGCCCGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: IFISTNVIDQFLERHRLPAEAEE*HEPGRQ
Trigger: CTGCCTCCCGGGCTCATGCCATTCTTCTGCCTCAGC...TGGCAGTCTGTGTCTTTCAAGGAATTGATCAATCACATTTGTGGATATGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451157.1
3UTR-3UTR GCA 90 bp TCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAATTGAAATTGAAAGACACAGACTaGCAAAACTCACACAAGAAG +
Preference number: 2 (lower is better)
Translates to: STNGARKTRYAMQRMKLKLKDTD*QNSHKK
Trigger: CTTCTTGTGTGAGTTTTGGCAGTCTGTGTCTTTCAA...TTTCAATTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451157.1
3UTR TCA 72 bp CACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTaGGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGA +
Preference number: 3 (lower is better)
Translates to: HTLALHPQNAPR*GSSVPFGGPRR
Trigger: TCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
3UTR-3UTR CAA 90 bp GTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGATCAGTAGAGCGGATCGGATGTGCAGAAGCTaGTCAGCATCGCCTGCAAAA +
Preference number: 3 (lower is better)
Translates to: VRLFSTLRWASEKISRADRMCRS*SASPAK
Trigger: TTTTGCAGGCGATGCTGACAAGCTTCTGCACATCCG...ATCCGCTCTACTGATCTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
3UTR CCA 72 bp TTCAGGCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTaGGTATACACACTCTGGCCCTCCACCCACAAAATG +
Preference number: 3 (lower is better)
Translates to: FRQQRPSPSRQA*VYTLWPSTHKM
Trigger: CATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
3UTR-3UTR CAA 90 bp TCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCTCACCAATCCCCGATTaGGACACATGTTGTTTTTGC +
Preference number: 3 (lower is better)
Translates to: SFQTSLGIHTLALHPQNASPIPD*DTCCFC
Trigger: GCAAAAACAACATGTGTCCAAATCGGGGATTGGTGA...GGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
3UTR TCA 72 bp ATCCCCGATTTGGACACATGTTGTTTTTGCACTTCTTaGCATAGGCCCAGGACCTCTGCAAGGTCTGCTCGT +
Preference number: 3 (lower is better)
Translates to: IPDLDTCCFCTS*HRPRTSARSAR
Trigger: ACGAGCAGACCTTGCAGAGGTCCTGGGCCTATGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438695.5
3UTR CCA 72 bp CTCCCATTCCAGCAGCTGGCTCACCAATCCCCGATTTaGACACATGTTGTTTTTGCACTTCTTGACATAGGC +
Preference number: 3 (lower is better)
Translates to: LPFQQLAHQSPI*THVVFALLDIG
Trigger: GCCTATGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
3UTR-3UTR CAA 90 bp AGCTGGCTCACCAATCCCCGATTTGGACACATGTTGTTTTTGCACTTCTTGACAGTATCCATGGAGACATaGACATGGGCTTTGATTTTC +
Preference number: 3 (lower is better)
Translates to: SWLTNPRFGHMLFLHFLTVSMET*TWALIF
Trigger: GAAAATCAAAGCCCATGTCAATGTCTCCATGGATAC...TGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCGGGGATTGGTGAGCCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
3UTR CCA 72 bp AATCTGAATAGGCCTACATATATTAAAGAAATTGAGTaGTGGCAGATGCCTGTAGTCCCAGTTACTCGGGAG +
Preference number: 3 (lower is better)
Translates to: NLNRPTYIKEIE*WQMPVVPVTRE
Trigger: CTCCCGAGTAACTGGGACTACAGGCATCTGCCACCACTCAATTTCTTTAATATATGTAGGCCTATTCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451157.1
3UTR-3UTR CAA 90 bp ATATTCATATCCACAAATGTGATTGATCAATTCCTTGAAAGACACAGACTGCCACATATATTAAAGAAATaGAGTGGTGGCAGATGCCTG +
Preference number: 3 (lower is better)
Translates to: IFISTNVIDQFLERHRLPHILKK*SGGRCL
Trigger: CAGGCATCTGCCACCACTCAATTTCTTTAATATATG...TGGCAGTCTGTGTCTTTCAAGGAATTGATCAATCACATTTGTGGATATGAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR GCA 90 bp GGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGCCCTGTCGGAGCCTCTaGCTGGGGCCCCACCTGGAA +
Preference number: 4 (lower is better)
Translates to: GPPPTKCPQVRLFSTLRWPCRSL*LGPHLE
Trigger: TTCCAGGTGGGGCCCCAGGCAGAGGCTCCGACAGGG...CCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR GCA 90 bp ACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGACTCCACCTCCCCGGCTaGGCGACTATGGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: THKMPPGEALQYPSVGLGLHLPG*ATMARL
Trigger: GAGCCTGGCCATAGTCGCGCAGCCGGGGAGGTGGAG...TCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp TGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGCCGGCTGCGCGACTATaGCCAGGCTCCCTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: WPSTHKMPPGEALQYPSVPAARL*PGSLSE
Trigger: CTCCGACAGGGAGCCTGGCCATAGTCGCGCAGCCGG...CACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp GCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCCGGCTGCGCGACTATaGCCAGGCTCCCTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: AWVYTLWPSTHKMPPGEAPAARL*PGSLSE
Trigger: CTCCGACAGGGAGCCTGGCCATAGTCGCGCAGCCGG...AGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCTCGGGGGCTCGGGTCTaGGACGCGCTCCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: QQRPSPSRQAWVYTLWPSSGARV*DALHLP
Trigger: GGGGAGGTGGAGCGCGTCCCAGACCCGAGCCCCCGA...GGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CAGGCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCTCGGGGGCTCGGGTCTaGGACGCGCTCCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: QAAKAFSFQTSLGIHTLASGARV*DALHLP
Trigger: GGGGAGGTGGAGCGCGTCCCAGACCCGAGCCCCCGA...GGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp TGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTTCGGGGGCTCGGGTCTaGGACGCGCTCCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: WVYTLWPSTHKMPPGEALSGARV*DALHLP
Trigger: GGGGAGGTGGAGCGCGTCCCAGACCCGAGCCCCCGA...AAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR GCA 90 bp CAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGCTCCACCTCCCCGGCTaGGCGACTATGGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QAWVYTLWPSTHKMPPGELHLPG*ATMARL
Trigger: GAGCCTGGCCATAGTCGCGCAGCCGGGGAGGTGGAG...CTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp TGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGCTCTTGGGTGCAGACTaGCCCTCCCACTCCGACCGC +
Preference number: 4 (lower is better)
Translates to: WPSTHKMPPGEALQYPSVLLGAD*PSHSDR
Trigger: GCGGTCGGAGTGGGAGGGCCAGTCTGCACCCAAGAG...CACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGCCGGCTGCGCGACTATaGCCAGGCTCCCTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: QTSLGIHTLALHPQNAPRPAARL*PGSLSE
Trigger: CTCCGACAGGGAGCCTGGCCATAGTCGCGCAGCCGG...CCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR GCA 90 bp GGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCAAACACCGGGGTTaGCAGGATGGTCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: GPPPTKCPQVRLFSTLRWAKHRG*QDGPTA
Trigger: AGCTGTGGGACCATCCTGGCAACCCCGGTGTTTGGC...CCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR GCA 90 bp CTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCCCTGTCGGAGCCTCTaGCTGGGGCCCCACCTGGAA +
Preference number: 4 (lower is better)
Translates to: LPDKPGYTHSGPPPTKCPPCRSL*LGPHLE
Trigger: TTCCAGGTGGGGCCCCAGGCAGAGGCTCCGACAGGG...GGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR GCA 90 bp AAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACTCCACCTCCCCGGCTaGGCGACTATGGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KAFSFQTSLGIHTLALHPLHLPG*ATMARL
Trigger: GAGCCTGGCCATAGTCGCGCAGCCGGGGAGGTGGAG...TGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp AAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTGGGTGCAGACTaGCCCTCCCACTCCGACCGC +
Preference number: 4 (lower is better)
Translates to: KPGYTHSGPPPTKCPQVRLLGAD*PSHSDR
Trigger: GCGGTCGGAGTGGGAGGGCCAGTCTGCACCCAAGAG...CCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp GGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGCAGAAGGAATGGGTTTaGCTGAGGTCGGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: GPPPTKCPQVRLFSTLRWQKEWV*LRSGAR
Trigger: CCGAGCCCCCGACCTCAGCCAAACCCATTCCTTCTG...CCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp AAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGAGGAATGGGTTTGGCTaGGGTCGGGGGCTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: KPGYTHSGPPPTKCPQVRRNGFG*GRGLGS
Trigger: AGACCCGAGCCCCCGACCTCAGCCAAACCCATTCCT...CCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR GCA 90 bp TCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCTGTCGGAGCCTCTaGCTGGGGCCCCACCTGGAA +
Preference number: 4 (lower is better)
Translates to: SFQTSLGIHTLALHPQNAPCRSL*LGPHLE
Trigger: TTCCAGGTGGGGCCCCAGGCAGAGGCTCCGACAGGG...GGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGCCGGGGTTGCCAGGATaGTCCCACAGCTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PTKCPQVRLFSTLRWASEPGLPG*SHSFPF
Trigger: GAAAGGAAAGCTGTGGGACCATCCTGGCAACCCCGG...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp GCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTGCTCAGAGTCCCCTCTaGCCTCCAAGGGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: AWVYTLWPSTHKMPPGEAAQSPL*PPRAEG
Trigger: TCCTTCTGCCCTTGGAGGCCAGAGGGGACTCTGAGC...AGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGTGGGTCCGGAGAAAGTaGTACGTGCCTGAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: PPTKCPQVRLFSTLRWASWVRRK*YVPEKR
Trigger: GCGCTTCTCAGGCACGTACCACTTTCTCCGGACCCA...CGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR TCA 90 bp CAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCAGGAATGGGTTTGGCTaGGGTCGGGGGCTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: QQRPSPSRQAWVYTLWPSRNGFG*GRGLGS
Trigger: AGACCCGAGCCCCCGACCTCAGCCAAACCCATTCCT...GGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp TGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGAAAGTGGTACGTGCCTaGGAAGCGCTCATAGCCCCC +
Preference number: 4 (lower is better)
Translates to: WPSTHKMPPGEALQYPSVKVVRA*EALIAP
Trigger: GGGGGCTATGAGCGCTTCTCAGGCACGTACCACTTT...CACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR TCA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGCAAAATGCCCCCAGGTaGGGCTCTTCAGTACCCTTC +
Preference number: 4 (lower is better)
Translates to: PTKCPQVRLFSTLRWASEQNAPR*GSSVPF
Trigger: GAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTG...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR GCA 90 bp CCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGCCAAACACCGGGGTTaGCAGGATGGTCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: PDKPGYTHSGPPPTKCPQAKHRG*QDGPTA
Trigger: AGCTGTGGGACCATCCTGGCAACCCCGGTGTTTGGC...CTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGCCGGGGTTGCCAGGATaGTCCCACAGCTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LWPSTHKMPPGEALQYPSPGLPG*SHSFPF
Trigger: GAAAGGAAAGCTGTGGGACCATCCTGGCAACCCCGG...CGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp AGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACGTCGGAGCCTCTGCCTaGGGCCCCACCTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: RPSPSRQAWVYTLWPSTHVGASA*GPTWKN
Trigger: ATTTTTCCAGGTGGGGCCCCAGGCAGAGGCTCCGAC...GTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp ACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGAAAGTGGTACGTGCCTaGGAAGCGCTCATAGCCCCC +
Preference number: 4 (lower is better)
Translates to: TKCPQVRLFSTLRWASEKKVVRA*EALIAP
Trigger: GGGGGCTATGAGCGCTTCTCAGGCACGTACCACTTT...CTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
CDS-3UTR TCA 90 bp CTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGCAAAATGCCCCCAGGTaGGGCTCTTCAGTACCCTTC +
Preference number: 4 (lower is better)
Translates to: LWPSTHKMPPGEALQYPSQNAPR*GSSVPF
Trigger: GAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTG...CGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR GCA 90 bp GCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAGCCAAACACCGGGGTTaGCAGGATGGTCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: AFSFQTSLGIHTLALHPQAKHRG*QDGPTA
Trigger: AGCTGTGGGACCATCCTGGCAACCCCGGTGTTTGGC...TTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR GCA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGGGAGAAAGTGGTACGTaGCTGAGAAGCGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: PTKCPQVRLFSTLRWASEGESGT*LRSAHS
Trigger: GCTATGAGCGCTTCTCAGGCACGTACCACTTTCTCC...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
CDS-3UTR CCA 90 bp GGCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTGTCGGAGCCTCTGCCTaGGGCCCCACCTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: GSKGLLLPDKPGYTHSGPVGASA*GPTWKN
Trigger: ATTTTTCCAGGTGGGGCCCCAGGCAGAGGCTCCGAC...AGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp TGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTGTCGGAGCCTCTGCCTaGGGCCCCACCTGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: WVYTLWPSTHKMPPGEALVGASA*GPTWKN
Trigger: ATTTTTCCAGGTGGGGCCCCAGGCAGAGGCTCCGAC...AAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp TGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGAAGGAATGGGTTTaGCTGAGGTCGGGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: WVYTLWPSTHKMPPGEALQKEWV*LRSGAR
Trigger: CCGAGCCCCCGACCTCAGCCAAACCCATTCCTTCTG...AAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp ACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCAAGGGCAGAAGGAATaGGTTTGGCTGAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: THSGPPPTKCPQVRLFSTQGQKE*VWLRSG
Trigger: CCCCGACCTCAGCCAAACCCATTCCTTCTGCCCTTG...GGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGCAAGGGCAGAAGGAATaGGTTTGGCTGAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: PDKPGYTHSGPPPTKCPQQGQKE*VWLRSG
Trigger: CCCCGACCTCAGCCAAACCCATTCCTTCTGCCCTTG...CTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp GCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCGCTCAGAGTCCCCTCTaGCCTCCAAGGGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: AAKAFSFQTSLGIHTLALAQSPL*PPRAEG
Trigger: TCCTTCTGCCCTTGGAGGCCAGAGGGGACTCTGAGC...GAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp ACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTGGGTCCGGAGAAAGTaGTACGTGCCTGAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: TLWPSTHKMPPGEALQYPWVRRK*YVPEKR
Trigger: GCGCTTCTCAGGCACGTACCACTTTCTCCGGACCCA...AGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR CCA 90 bp ACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGTGGGTCCGGAGAAAGTaGTACGTGCCTGAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: TKCPQVRLFSTLRWASEKWVRRK*YVPEKR
Trigger: GCGCTTCTCAGGCACGTACCACTTTCTCCGGACCCA...CTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
CDS-3UTR CCA 90 bp CCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCTTCAGTACCCTTCGGTaGGCCTCGGAGAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: PSTHKMPPGEALQYPSVGFSTLR*ASEKIS
Trigger: ACTGATCTTCTCCGAGGCCCACCGAAGGGTACTGAA...GCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp ACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGACCTTCCAGACAAGCCTaGGTATACACACTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: THKMPPGEALQYPSVGLGPSRQA*VYTLWP
Trigger: GGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGG...TCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGTTGGGGTCACAGGCTTaGCTGAAATTGCCAACGAAG +
Preference number: 4 (lower is better)
Translates to: PTKCPQVRLFSTLRWASELGSQA*LKLPTK
Trigger: CTTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAA...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR TCA 90 bp ACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTCGGCACAACTGCGGCTaGTACCTTGGGTGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: TLWPSTHKMPPGEALQYPRHNCG*YLGWKR
Trigger: TCTTTTCCACCCAAGGTATCAGCCGCAGTTGTGCCG...AGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000438695.5
CDS-3UTR TCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAACGGCACAACTGCGGCTaGTACCTTGGGTGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGERHNCG*YLGWKR
Trigger: TCTTTTCCACCCAAGGTATCAGCCGCAGTTGTGCCG...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000438695.5
CDS-3UTR TCA 90 bp GGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACACAAAATGCCCCCAGGTaGGGCTCTTCAGTACCCTTC +
Preference number: 4 (lower is better)
Translates to: GLLLPDKPGYTHSGPPPTQNAPR*GSSVPF
Trigger: GAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTG...TGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp CAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGCAAAATGCCCCCAGGTaGGGCTCTTCAGTACCCTTC +
Preference number: 4 (lower is better)
Translates to: QAWVYTLWPSTHKMPPGEQNAPR*GSSVPF
Trigger: GAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTG...CTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp CCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGGCCCAGGACCTCAATaGAGTGACACATGTGGCGTA +
Preference number: 4 (lower is better)
Translates to: PDKPGYTHSGPPPTKCPQGPGPQ*SDTCGV
Trigger: TACGCCACATGTGTCACTTCATTGAGGTCCTGGGCC...CTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430497.5
CDS-3UTR GCA 90 bp AGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCAGCCAAACACCGGGGTTaGCAGGATGGTCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: SKGLLLPDKPGYTHSGPPAKHRG*QDGPTA
Trigger: AGCTGTGGGACCATCCTGGCAACCCCGGTGTTTGGC...TGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR GCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGGCGGGTCAGGATCCTaGCATACTCAATGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGEGGSGS*HTQWLL
Trigger: AAGCAGCCATTGAGTATGGCAGGATCCTGACCCGCC...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
CDS-3UTR GCA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGGACCTCTGCAAGGTCTaGTCGTTACTATGCATGAGG +
Preference number: 4 (lower is better)
Translates to: PTKCPQVRLFSTLRWASEDLCKV*SLLCMR
Trigger: CCTCATGCATAGTAACGAGCAGACCTTGCAGAGGTC...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000438695.5
CDS-3UTR GCA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGGCAAACCAGGCATCCTaGTGGAAAAATGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PTKCPQVRLFSTLRWASEANQAS*WKNGSS
Trigger: AGAGGAGCCATTTTTCCAGCAGGATGCCTGGTTTGC...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000431581.5
CDS-3UTR CCA 90 bp GCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCCGGGGTTGCCAGGATaGTCCCACAGCTTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: AAKAFSFQTSLGIHTLALPGLPG*SHSFPF
Trigger: GAAAGGAAAGCTGTGGGACCATCCTGGCAACCCCGG...GAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCGCTCAGAGTCCCCTCTaGCCTCCAAGGGCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LLPDKPGYTHSGPPPTKCAQSPL*PPRAEG
Trigger: TCCTTCTGCCCTTGGAGGCCAGAGGGGACTCTGAGC...GCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp ACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGATCCCATTCCAGCAGCTaGCTCACCAATCCCCGATTT +
Preference number: 4 (lower is better)
Translates to: THKMPPGEALQYPSVGLGSHSSS*LTNPRF
Trigger: AAATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGA...TCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR CCA 90 bp TGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGTTCAGTACCCTTCGGTaGGCCTCGGAGAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: WPSTHKMPPGEALQYPSVFSTLR*ASEKIS
Trigger: ACTGATCTTCTCCGAGGCCCACCGAAGGGTACTGAA...CACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp AGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACCCTTCCAGACAAGCCTaGGTATACACACTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RPSPSRQAWVYTLWPSTHPSRQA*VYTLWP
Trigger: GGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGG...GTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAACCTTCCAGACAAGCCTaGGTATACACACTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGEPSRQA*VYTLWP
Trigger: GGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGG...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp TTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATAGGAATGGGTTTGGCTaGGGTCGGGGGCTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: FSFQTSLGIHTLALHPQNRNGFG*GRGLGS
Trigger: AGACCCGAGCCCCCGACCTCAGCCAAACCCATTCCT...ATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp TGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGTTGGGGTCACAGGCTTaGCTGAAATTGCCAACGAAG +
Preference number: 4 (lower is better)
Translates to: WPSTHKMPPGEALQYPSVLGSQA*LKLPTK
Trigger: CTTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAA...CACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp GCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCGGCACAACTGCGGCTaGTACCTTGGGTGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: AAKAFSFQTSLGIHTLALRHNCG*YLGWKR
Trigger: TCTTTTCCACCCAAGGTATCAGCCGCAGTTGTGCCG...GAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp CCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCGGCACAACTGCGGCTaGTACCTTGGGTGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: PSRQAWVYTLWPSTHKMPRHNCG*YLGWKR
Trigger: TCTTTTCCACCCAAGGTATCAGCCGCAGTTGTGCCG...GGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000438695.5
CDS-3UTR TCA 90 bp CCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGTCAATGGGGTATGGCTaGAATGCATCCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PPTKCPQVRLFSTLRWASSMGYG*NASSSF
Trigger: GAAGGAACTGGATGCATTTCAGCCATACCCCATTGA...CGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340062.9
ENST00000360591.7
CDS-3UTR GCA 90 bp GCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAGGCGGGTCAGGATCCTaGCATACTCAATGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: AFSFQTSLGIHTLALHPQGGSGS*HTQWLL
Trigger: AAGCAGCCATTGAGTATGGCAGGATCCTGACCCGCC...TTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR GCA 90 bp TGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGACCTCTGCAAGGTCTaGTCGTTACTATGCATGAGG +
Preference number: 4 (lower is better)
Translates to: WPSTHKMPPGEALQYPSVDLCKV*SLLCMR
Trigger: CCTCATGCATAGTAACGAGCAGACCTTGCAGAGGTC...CACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000438695.5
CDS-3UTR CCA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAGGGCAGTGATCACATaGCTTTCGTCATACTCCCAT +
Preference number: 4 (lower is better)
Translates to: PTKCPQVRLFSTLRWASERAVIT*LSSYSH
Trigger: ATGGGAGTATGACGAAAGCCATGTGATCACTGCCCT...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
CDS-3UTR CCA 90 bp GGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGAAGAAGGGAAGAATCTaGGCTTCCGGGGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: GPPPTKCPQVRLFSTLRWKKGRI*ASGESS
Trigger: AGAAGATTCCCCGGAAGCCCAGATTCTTCCCTTCTT...CCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGAAGGGAAGAATCTaGGCTTCCGGGGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: PTKCPQVRLFSTLRWASEKKGRI*ASGESS
Trigger: AGAAGATTCCCCGGAAGCCCAGATTCTTCCCTTCTT...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGTCCCATTCCAGCAGCTaGCTCACCAATCCCCGATTT +
Preference number: 4 (lower is better)
Translates to: PDKPGYTHSGPPPTKCPQSHSSS*LTNPRF
Trigger: AAATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGA...CTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGTTCAGTACCCTTCGGTaGGCCTCGGAGAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: QAWVYTLWPSTHKMPPGEFSTLR*ASEKIS
Trigger: ACTGATCTTCTCCGAGGCCCACCGAAGGGTACTGAA...CTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp ACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGTTCAGTACCCTTCGGTaGGCCTCGGAGAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: TKCPQVRLFSTLRWASEKFSTLR*ASEKIS
Trigger: ACTGATCTTCTCCGAGGCCCACCGAAGGGTACTGAA...CTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR TCA 90 bp GGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCTCACTCGAAGGGCAGTaGTCACATGGCTTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: GYTHSGPPPTKCPQVRLFSLEGQ*SHGFRH
Trigger: ATGACGAAAGCCATGTGATCACTGCCCTTCGAGTGA...GAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp CAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGTCACTCGAAGGGCAGTaGTCACATGGCTTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: QAWVYTLWPSTHKMPPGESLEGQ*SHGFRH
Trigger: ATGACGAAAGCCATGTGATCACTGCCCTTCGAGTGA...CTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp ACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGATACTCAATGGCTGCTTaGGGCACAAGATCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: THKMPPGEALQYPSVGLGYSMAA*GTRSLP
Trigger: TGGCAAAGATCTTGTGCCTCAAGCAGCCATTGAGTA...TCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
CDS-3UTR TCA 90 bp GGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAGGTCACAGGCTTGACTaGAATTGCCAACGAAGACCT +
Preference number: 4 (lower is better)
Translates to: GLLLPDKPGYTHSGPPPTGHRLD*NCQRRP
Trigger: AGGTCTTCGTTGGCAATTTCAGTCAAGCCTGTGACC...TGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp CAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGGTCACAGGCTTGACTaGAATTGCCAACGAAGACCT +
Preference number: 4 (lower is better)
Translates to: QAWVYTLWPSTHKMPPGEGHRLD*NCQRRP
Trigger: AGGTCTTCGTTGGCAATTTCAGTCAAGCCTGTGACC...CTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp CCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGGTCACAGGCTTGACTaGAATTGCCAACGAAGACCT +
Preference number: 4 (lower is better)
Translates to: PDKPGYTHSGPPPTKCPQGHRLD*NCQRRP
Trigger: AGGTCTTCGTTGGCAATTTCAGTCAAGCCTGTGACC...CTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGGTCACAGGCTTGACTaGAATTGCCAACGAAGACCT +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGEGHRLD*NCQRRP
Trigger: AGGTCTTCGTTGGCAATTTCAGTCAAGCCTGTGACC...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR TCA 90 bp CCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGTTGGGGTCACAGGCTTaGCTGAAATTGCCAACGAAG +
Preference number: 4 (lower is better)
Translates to: PDKPGYTHSGPPPTKCPQLGSQA*LKLPTK
Trigger: CTTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAA...CTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp GGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCTTGGGGTCACAGGCTTaGCTGAAATTGCCAACGAAG +
Preference number: 4 (lower is better)
Translates to: GYTHSGPPPTKCPQVRLFLGSQA*LKLPTK
Trigger: CTTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAA...GAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp GACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGTTGGGGTCACAGGCTTaGCTGAAATTGCCAACGAAG +
Preference number: 4 (lower is better)
Translates to: DKPGYTHSGPPPTKCPQVLGSQA*LKLPTK
Trigger: CTTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAA...CACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp CCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAACGGCACAACTGCGGCTaGTACCTTGGGTGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: PSPSRQAWVYTLWPSTHKRHNCG*YLGWKR
Trigger: TCTTTTCCACCCAAGGTATCAGCCGCAGTTGTGCCG...TTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp TCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCGGCACAACTGCGGCTaGTACCTTGGGTGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: SFQTSLGIHTLALHPQNARHNCG*YLGWKR
Trigger: TCTTTTCCACCCAAGGTATCAGCCGCAGTTGTGCCG...GGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000438695.5
CDS-3UTR TCA 90 bp AGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACAAAATGCCCCCAGGTaGGGCTCTTCAGTACCCTTC +
Preference number: 4 (lower is better)
Translates to: SKGLLLPDKPGYTHSGPPQNAPR*GSSVPF
Trigger: GAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTG...TGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR GCA 90 bp CCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGTATCTCCAGGGTGCTaGTGTTGTTATCATACACCA +
Preference number: 4 (lower is better)
Translates to: PPTKCPQVRLFSTLRWASVSPGC*CCYHTP
Trigger: TGGTGTATGATAACAACAGCAGCACCCTGGAGATAC...CGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000430497.5
ENST00000438695.5
CDS-3UTR GCA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGGTATCTCCAGGGTGCTaGTGTTGTTATCATACACCA +
Preference number: 4 (lower is better)
Translates to: PTKCPQVRLFSTLRWASEVSPGC*CCYHTP
Trigger: TGGTGTATGATAACAACAGCAGCACCCTGGAGATAC...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR GCA 90 bp ACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAGGCACAAGATCTTTaGCATCACCATCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: THKMPPGEALQYPSVGLGEAQDL*HHHQSL
Trigger: CAGACTCTGATGGTGATGGCAAAGATCTTGTGCCTC...TCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
CDS-3UTR GCA 90 bp CAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCGGAGAAAGTGGTACGTaGCTGAGAAGCGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: QQRPSPSRQAWVYTLWPSGESGT*LRSAHS
Trigger: GCTATGAGCGCTTCTCAGGCACGTACCACTTTCTCC...GGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR GCA 90 bp ACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCGACCTCTGCAAGGTCTaGTCGTTACTATGCATGAGG +
Preference number: 4 (lower is better)
Translates to: THSGPPPTKCPQVRLFSTDLCKV*SLLCMR
Trigger: CCTCATGCATAGTAACGAGCAGACCTTGCAGAGGTC...GGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000438695.5
CDS-3UTR CCA 90 bp TACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACTCCCATTCCAGCAGCTaGCTCACCAATCCCCGATTT +
Preference number: 4 (lower is better)
Translates to: YTLWPSTHKMPPGEALQYSHSSS*LTNPRF
Trigger: AAATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGA...GTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp GCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAATCCCATTCCAGCAGCTaGCTCACCAATCCCCGATTT +
Preference number: 4 (lower is better)
Translates to: AFSFQTSLGIHTLALHPQSHSSS*LTNPRF
Trigger: AAATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGA...TTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp GCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCTCCCATTCCAGCAGCTaGCTCACCAATCCCCGATTT +
Preference number: 4 (lower is better)
Translates to: AAKAFSFQTSLGIHTLALSHSSS*LTNPRF
Trigger: AAATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGA...GAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp GGCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTTTCAGTACCCTTCGGTaGGCCTCGGAGAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: GSKGLLLPDKPGYTHSGPFSTLR*ASEKIS
Trigger: ACTGATCTTCTCCGAGGCCCACCGAAGGGTACTGAA...AGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp AGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTTTCAGTACCCTTCGGTaGGCCTCGGAGAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: RQAWVYTLWPSTHKMPPGFSTLR*ASEKIS
Trigger: ACTGATCTTCTCCGAGGCCCACCGAAGGGTACTGAA...ACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp GGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCTGGGTATACACACTCTaGCCCTCCACCCACAAAATG +
Preference number: 4 (lower is better)
Translates to: GYTHSGPPPTKCPQVRLFWVYTL*PSTHKM
Trigger: CATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCA...GAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp ACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGTGGGTATACACACTCTaGCCCTCCACCCACAAAATG +
Preference number: 4 (lower is better)
Translates to: TKCPQVRLFSTLRWASEKWVYTL*PSTHKM
Trigger: CATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCA...CTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp AGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACTACTCAATGGCTGCTTaGGGCACAAGATCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: RPSPSRQAWVYTLWPSTHYSMAA*GTRSLP
Trigger: TGGCAAAGATCTTGTGCCTCAAGCAGCCATTGAGTA...GTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR TCA 90 bp AAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCAGGTCACAGGCTTGACTaGAATTGCCAACGAAGACCT +
Preference number: 4 (lower is better)
Translates to: KAFSFQTSLGIHTLALHPGHRLD*NCQRRP
Trigger: AGGTCTTCGTTGGCAATTTCAGTCAAGCCTGTGACC...TGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGGATGGTGAATTTCAATaGAGTGACACATGTGGCGTA +
Preference number: 4 (lower is better)
Translates to: PTKCPQVRLFSTLRWASEDGEFQ*SDTCGV
Trigger: TACGCCACATGTGTCACTTCATTGAAATTCACCATC...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000438695.5
CDS-3UTR TCA 90 bp GCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTTGGAAAAGATCAGAATaGCAGAGCCAAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: AWVYTLWPSTHKMPPGEAWKRSE*QSQGDG
Trigger: ACCATCACCTTGGCTCTGTCATTCTGATCTTTTCCA...AGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000438695.5
CDS-3UTR TCA 90 bp ACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGATGGAAAAGATCAGAATaGCAGAGCCAAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: THKMPPGEALQYPSVGLGWKRSE*QSQGDG
Trigger: ACCATCACCTTGGCTCTGTCATTCTGATCTTTTCCA...TCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000438695.5
CDS-3UTR TCA 90 bp AAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGTGTTTTTGCACTTCTTaGCATAGGCCCAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: KPGYTHSGPPPTKCPQVRCFCTS*HRPRTS
Trigger: AGAGGTCCTGGGCCTATGTCAAGAAGTGCAAAAACA...CCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000438695.5
CDS-3UTR TCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAATGTTTTTGCACTTCTTaGCATAGGCCCAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGECFCTS*HRPRTS
Trigger: AGAGGTCCTGGGCCTATGTCAAGAAGTGCAAAAACA...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000438695.5
CDS-3UTR GCA 90 bp TCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGGGCGGGTCAGGATCCTaGCATACTCAATGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SPSRQAWVYTLWPSTHKMGGSGS*HTQWLL
Trigger: AAGCAGCCATTGAGTATGGCAGGATCCTGACCCGCC...CATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR GCA 90 bp AGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCAGGAGAAAGTGGTACGTaGCTGAGAAGCGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: SKGLLLPDKPGYTHSGPPGESGT*LRSAHS
Trigger: GCTATGAGCGCTTCTCAGGCACGTACCACTTTCTCC...TGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR GCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAATCTTCTATCCGGATGTaGAGAAGCTTGTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGESSIRM*RSLSAS
Trigger: CGATGCTGACAAGCTTCTGCACATCCGGATAGAAGA...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR GCA 90 bp AAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGTCTTCTATCCGGATGTaGAGAAGCTTGTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: KPGYTHSGPPPTKCPQVRSSIRM*RSLSAS
Trigger: CGATGCTGACAAGCTTCTGCACATCCGGATAGAAGA...CCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR GCA 90 bp ACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGTCTTCTATCCGGATGTaGAGAAGCTTGTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: TKCPQVRLFSTLRWASEKSSIRM*RSLSAS
Trigger: CGATGCTGACAAGCTTCTGCACATCCGGATAGAAGA...CTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR GCA 90 bp AGGCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCGACCTCTGCAAGGTCTaGTCGTTACTATGCATGAGG +
Preference number: 4 (lower is better)
Translates to: RQQRPSPSRQAWVYTLWPDLCKV*SLLCMR
Trigger: CCTCATGCATAGTAACGAGCAGACCTTGCAGAGGTC...GGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR GCA 90 bp CAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGGGGTATGGCTGAAATaGATCCAGTTCCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: QAWVYTLWPSTHKMPPGEGVWLK*IQFLCH
Trigger: ATGGCAAAGGAACTGGATGCATTTCAGCCATACCCC...CTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp TTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATCAAGGGCAGAAGGAATaGGTTTGGCTGAGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: FSFQTSLGIHTLALHPQNQGQKE*VWLRSG
Trigger: CCCCGACCTCAGCCAAACCCATTCCTTCTGCCCTTG...ATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp ACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGATGGGGTCTGTTAATCTaGAGAGTTTTGTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: THKMPPGEALQYPSVGLGWGLLI*RVLWPD
Trigger: ATCAGGCCACAAAACTCTCCAGATTAACAGACCCCA...TCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
CDS-3UTR CCA 90 bp CCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGCGTCATACTCCCATTTaGAACGGACATCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: PPTKCPQVRLFSTLRWASRHTPI*NGHPIN
Trigger: GTTTATTGGATGTCCGTTCCAAATGGGAGTATGACG...CGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp GACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGGCAGTGATCACATaGCTTTCGTCATACTCCCAT +
Preference number: 4 (lower is better)
Translates to: DKPGYTHSGPPPTKCPQVRAVIT*LSSYSH
Trigger: ATGGGAGTATGACGAAAGCCATGTGATCACTGCCCT...CACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp ACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTAGGGCAGTGATCACATaGCTTTCGTCATACTCCCAT +
Preference number: 4 (lower is better)
Translates to: TLWPSTHKMPPGEALQYPRAVIT*LSSYSH
Trigger: ATGGGAGTATGACGAAAGCCATGTGATCACTGCCCT...AGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAAGGGCAGTGATCACATaGCTTTCGTCATACTCCCAT +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGERAVIT*LSSYSH
Trigger: ATGGGAGTATGACGAAAGCCATGTGATCACTGCCCT...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
CDS-3UTR CCA 90 bp GACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGATCCAGATGATCTTCTaGGTCCGGAGAAAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: DKPGYTHSGPPPTKCPQVIQMIF*VRRKWY
Trigger: GTACCACTTTCTCCGGACCCAGAAGATCATCTGGAT...CACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR CCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAATCCAGATGATCTTCTaGGTCCGGAGAAAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGEIQMIF*VRRKWY
Trigger: GTACCACTTTCTCCGGACCCAGAAGATCATCTGGAT...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
CDS-3UTR CCA 90 bp ACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGATCCAGATGATCTTCTaGGTCCGGAGAAAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: TKCPQVRLFSTLRWASEKIQMIF*VRRKWY
Trigger: GTACCACTTTCTCCGGACCCAGAAGATCATCTGGAT...CTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
CDS-3UTR CCA 90 bp CCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCGATTTCAATGGGGTATaGCTGAAATGCATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: PSTHKMPPGEALQYPSVGDFNGV*LKCIQF
Trigger: GAACTGGATGCATTTCAGCCATACCCCATTGAAATC...GCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp TGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGATCAGTCTGGCACGATTTCAATaGGGTATGGCTGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: CPQVRLFSTLRWASEKISLARFQ*GMAEMH
Trigger: ATGCATTTCAGCCATACCCCATTGAAATCGTGCCAG...ACTGATCTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp AGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAACGAAGACCTTCCCTaGCACGATTTCAATGGGGTA +
Preference number: 4 (lower is better)
Translates to: RPSPSRQAWVYTLWPSTHNEDLP*HDFNGV
Trigger: TACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTT...GTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp ACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTAACGAAGACCTTCCCTaGCACGATTTCAATGGGGTA +
Preference number: 4 (lower is better)
Translates to: TLWPSTHKMPPGEALQYPNEDLP*HDFNGV
Trigger: TACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTT...AGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAAACGAAGACCTTCCCTaGCACGATTTCAATGGGGTA +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGENEDLP*HDFNGV
Trigger: TACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTT...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGAACGAAGACCTTCCCTaGCACGATTTCAATGGGGTA +
Preference number: 4 (lower is better)
Translates to: QTSLGIHTLALHPQNAPRNEDLP*HDFNGV
Trigger: TACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTT...CCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp TACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACTGGGTATACACACTCTaGCCCTCCACCCACAAAATG +
Preference number: 4 (lower is better)
Translates to: YTLWPSTHKMPPGEALQYWVYTL*PSTHKM
Trigger: CATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCA...GTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAACCTTCCAGACAAGCCTaGGTATACACACTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LLLPDKPGYTHSGPPPTKPSRQA*VYTLWP
Trigger: GGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGG...TTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp ACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTGCAAACCAGGCATCCTaGAAAAATGGCTCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: TLWPSTHKMPPGEALQYPANQAS*KNGSSK
Trigger: CTTAGAGGAGCCATTTTTCCAGGATGCCTGGTTTGC...AGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340062.9
CDS-3UTR CCA 90 bp ACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGAACCAGGCATCCTGCTaGAAAAATGGCTCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: TKCPQVRLFSTLRWASEKNQASC*KNGSSK
Trigger: CTTAGAGGAGCCATTTTTCCAGCAGGATGCCTGGTT...CTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000431581.5
CDS-3UTR TCA 90 bp TCAGGCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCTTGGGGTCACAGGCTTaGCTGAAATTGCCAACGAAG +
Preference number: 4 (lower is better)
Translates to: SGSKGLLLPDKPGYTHSGLGSQA*LKLPTK
Trigger: CTTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAA...GCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp TGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGATGGTGAATTTCAATaGAGTGACACATGTGGCGTA +
Preference number: 4 (lower is better)
Translates to: WPSTHKMPPGEALQYPSVDGEFQ*SDTCGV
Trigger: TACGCCACATGTGTCACTTCATTGAAATTCACCATC...CACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000438695.5
CDS-3UTR TCA 90 bp CTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGATGGTGAATTTCAATaGAGTGACACATGTGGCGTA +
Preference number: 4 (lower is better)
Translates to: LWPSTHKMPPGEALQYPSDGEFQ*SDTCGV
Trigger: TACGCCACATGTGTCACTTCATTGAAATTCACCATC...CGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000438695.5
CDS-3UTR TCA 90 bp CCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGTGGAAAAGATCAGAATaGCAGAGCCAAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: PDKPGYTHSGPPPTKCPQWKRSE*QSQGDG
Trigger: ACCATCACCTTGGCTCTGTCATTCTGATCTTTTCCA...CTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000438695.5
CDS-3UTR TCA 90 bp GCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCTGTTTTTGCACTTCTTaGCATAGGCCCAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: AAKAFSFQTSLGIHTLALCFCTS*HRPRTS
Trigger: AGAGGTCCTGGGCCTATGTCAAGAAGTGCAAAAACA...GAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp GAAGAATCTGGGCTTCCGGGGAATCTTCTATCCGGATGTGCAGAAGCTTGTCAGCAAAATGCCCCCAGGTaGGGCTCTTCAGTACCCTTC +
Preference number: 4 (lower is better)
Translates to: EESGLPGNLLSGCAEACQQNAPR*GSSVPF
Trigger: GAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTG...CTGACAAGCTTCTGCACATCCGGATAGAAGATTCCCCGGAAGCCCAGATTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp AAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCATCAATGGGGTATGGCTaGAATGCATCCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: KAFSFQTSLGIHTLALHPSMGYG*NASSSF
Trigger: GAAGGAACTGGATGCATTTCAGCCATACCCCATTGA...TGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340062.9
ENST00000360591.7
CDS-3UTR GCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGTATCTCCAGGGTGCTaGTGTTGTTATCATACACCA +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGEVSPGC*CCYHTP
Trigger: TGGTGTATGATAACAACAGCAGCACCCTGGAGATAC...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR GCA 90 bp ACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGGTATCTCCAGGGTGCTaGTGTTGTTATCATACACCA +
Preference number: 4 (lower is better)
Translates to: TKCPQVRLFSTLRWASEKVSPGC*CCYHTP
Trigger: TGGTGTATGATAACAACAGCAGCACCCTGGAGATAC...CTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR GCA 90 bp ACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAAGAGTATCTCCAGGGTaGTGCTGTTGTTATCATACA +
Preference number: 4 (lower is better)
Translates to: THKMPPGEALQYPSVGLGRVSPG*CCCYHT
Trigger: TGTATGATAACAACAGCAGCACCCTGGAGATACTCT...TCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR GCA 90 bp ACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGGCCATACTCAATGGCTaGTTGAGGCACAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: TKCPQVRLFSTLRWASEKAILNG*LRHKIF
Trigger: AAAGATCTTGTGCCTCAAGCAGCCATTGAGTATGGC...CTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
CDS-3UTR GCA 90 bp GCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCTCTTCTATCCGGATGTaGAGAAGCTTGTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: AAKAFSFQTSLGIHTLALSSIRM*RSLSAS
Trigger: CGATGCTGACAAGCTTCTGCACATCCGGATAGAAGA...GAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR GCA 90 bp AAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGATTCTTCTATCCGGATGTaGAGAAGCTTGTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: KMPPGEALQYPSVGLGEDSSIRM*RSLSAS
Trigger: CGATGCTGACAAGCTTCTGCACATCCGGATAGAAGA...ATCTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR GCA 90 bp TCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCATCTTCTATCCGGATGTaGAGAAGCTTGTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: SRQAWVYTLWPSTHKMPPSSIRM*RSLSAS
Trigger: CGATGCTGACAAGCTTCTGCACATCCGGATAGAAGA...TGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR GCA 90 bp AGCCACTGCACCGGGCCTGTCAAGGAATTTTTGATAGTATGCCAAGACCATTCGACAGGTGTGAGCCACTaGACCGGGCCTGTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: SHCTGPVKEFLIVCQDHSTGVSH*TGPVKE
Trigger: TTCCTTGACAGGCCCGGTGCAGTGGCTCACACCTGT...CGAATGGTCTTGGCATACTATCAAAAATTCCTTGACAGGCCCGGTGCAGTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp ACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAATCTGGAGAGTTTTGTaGCCTGATTCAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: THKMPPGEALQYPSVGLGIWRVL*PDSGCC
Trigger: ACAACATCCTGAATCAGGCCACAAAACTCTCCAGAT...TCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
CDS-3UTR CCA 90 bp CAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGTGGGGTCTGTTAATCTaGAGAGTTTTGTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: QAWVYTLWPSTHKMPPGEWGLLI*RVLWPD
Trigger: ATCAGGCCACAAAACTCTCCAGATTAACAGACCCCA...CTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp AGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACTGGGGTCTGTTAATCTaGAGAGTTTTGTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: RPSPSRQAWVYTLWPSTHWGLLI*RVLWPD
Trigger: ATCAGGCCACAAAACTCTCCAGATTAACAGACCCCA...GTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp TCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCCGTCATACTCCCATTTaGAACGGACATCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: STHKMPPGEALQYPSVGLRHTPI*NGHPIN
Trigger: GTTTATTGGATGTCCGTTCCAAATGGGAGTATGACG...GAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp GTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGAGGGCAGTGATCACATaGCTTTCGTCATACTCCCAT +
Preference number: 4 (lower is better)
Translates to: VYTLWPSTHKMPPGEALQRAVIT*LSSYSH
Trigger: ATGGGAGTATGACGAAAGCCATGTGATCACTGCCCT...CTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp ACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGATTTCAATGGGGTATaGCTGAAATGCATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: THKMPPGEALQYPSVGLGDFNGV*LKCIQF
Trigger: GAACTGGATGCATTTCAGCCATACCCCATTGAAATC...TCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAACTGGCACGATTTCAATaGGGTATGGCTGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGELARFQ*GMAEMH
Trigger: ATGCATTTCAGCCATACCCCATTGAAATCGTGCCAG...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR CCA 90 bp GCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACAACGAAGACCTTCCCTaGCACGATTTCAATGGGGTA +
Preference number: 4 (lower is better)
Translates to: AKAFSFQTSLGIHTLALHNEDLP*HDFNGV
Trigger: TACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTT...GTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp AGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTAAGAAGGGAAGAATCTaGGCTTCCGGGGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: RQAWVYTLWPSTHKMPPGKKGRI*ASGESS
Trigger: AGAAGATTCCCCGGAAGCCCAGATTCTTCCCTTCTT...ACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp TGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTAAGAAGGGAAGAATCTaGGCTTCCGGGGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: WVYTLWPSTHKMPPGEALKKGRI*ASGESS
Trigger: AGAAGATTCCCCGGAAGCCCAGATTCTTCCCTTCTT...AAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp TCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAAAGAAGGGAAGAATCTaGGCTTCCGGGGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: SRQAWVYTLWPSTHKMPPKKGRI*ASGESS
Trigger: AGAAGATTCCCCGGAAGCCCAGATTCTTCCCTTCTT...TGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp TCAGGCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCTGGGTATACACACTCTaGCCCTCCACCCACAAAATG +
Preference number: 4 (lower is better)
Translates to: SGSKGLLLPDKPGYTHSGWVYTL*PSTHKM
Trigger: CATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCA...GCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp TCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGTTGGGGTCACAGGCTTaGCTGAAATTGCCAACGAAG +
Preference number: 4 (lower is better)
Translates to: SPSRQAWVYTLWPSTHKMLGSQA*LKLPTK
Trigger: CTTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAA...CATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp GCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCTGGAAAAGATCAGAATaGCAGAGCCAAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: AAKAFSFQTSLGIHTLALWKRSE*QSQGDG
Trigger: ACCATCACCTTGGCTCTGTCATTCTGATCTTTTCCA...GAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp AGCCACTGCACCGGGCCTGTCAAGGAATTTTTGATAGTATGCCAAGACCATTCGCGGCACAACTGCGGCTaGTACCTTGGGTGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: SHCTGPVKEFLIVCQDHSRHNCG*YLGWKR
Trigger: TCTTTTCCACCCAAGGTATCAGCCGCAGTTGTGCCG...CGAATGGTCTTGGCATACTATCAAAAATTCCTTGACAGGCCCGGTGCAGTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR TCA 90 bp CTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCTGTTTTTGCACTTCTTaGCATAGGCCCAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: LLPDKPGYTHSGPPPTKCCFCTS*HRPRTS
Trigger: AGAGGTCCTGGGCCTATGTCAAGAAGTGCAAAAACA...GCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000438695.5
CDS-3UTR GCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAAGAGTATCTCCAGGGTaGTGCTGTTGTTATCATACA +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGERVSPG*CCCYHT
Trigger: TGTATGATAACAACAGCAGCACCCTGGAGATACTCT...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR GCA 90 bp AGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCAGAGGCACAAGATCTTTaGCATCACCATCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SKGLLLPDKPGYTHSGPPEAQDL*HHHQSL
Trigger: CAGACTCTGATGGTGATGGCAAAGATCTTGTGCCTC...TGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR GCA 90 bp TGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTGCCATACTCAATGGCTaGTTGAGGCACAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: WVYTLWPSTHKMPPGEALAILNG*LRHKIF
Trigger: AAAGATCTTGTGCCTCAAGCAGCCATTGAGTATGGC...AAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR GCA 90 bp AGCCACTGCACCGGGCCTGTCAAGGAATTTTTGATAGTATGCCAAGACCATTCGGGCGGGTCAGGATCCTaGCATACTCAATGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SHCTGPVKEFLIVCQDHSGGSGS*HTQWLL
Trigger: AAGCAGCCATTGAGTATGGCAGGATCCTGACCCGCC...CGAATGGTCTTGGCATACTATCAAAAATTCCTTGACAGGCCCGGTGCAGTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp GACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGATCTGGAGAGTTTTGTaGCCTGATTCAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: DKPGYTHSGPPPTKCPQVIWRVL*PDSGCC
Trigger: ACAACATCCTGAATCAGGCCACAAAACTCTCCAGAT...CACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGATCTGGAGAGTTTTGTaGCCTGATTCAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: QTSLGIHTLALHPQNAPRIWRVL*PDSGCC
Trigger: ACAACATCCTGAATCAGGCCACAAAACTCTCCAGAT...CCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp AAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGATCTGGAGAGTTTTGTaGCCTGATTCAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: KPGYTHSGPPPTKCPQVRIWRVL*PDSGCC
Trigger: ACAACATCCTGAATCAGGCCACAAAACTCTCCAGAT...CCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCTGGGGTCTGTTAATCTaGAGAGTTTTGTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: QQRPSPSRQAWVYTLWPSWGLLI*RVLWPD
Trigger: ATCAGGCCACAAAACTCTCCAGATTAACAGACCCCA...GGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGATAAACAGAGATAGTTaGGGTCTGTTAATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PTKCPQVRLFSTLRWASEINRDS*GLLIWR
Trigger: TCTCCAGATTAACAGACCCCAACTATCTCTGTTTAT...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
CDS-3UTR CCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAACGTCATACTCCCATTTaGAACGGACATCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGERHTPI*NGHPIN
Trigger: GTTTATTGGATGTCCGTTCCAAATGGGAGTATGACG...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
CDS-3UTR CCA 90 bp GACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGGATTTCAATGGGGTATaGCTGAAATGCATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: DKPGYTHSGPPPTKCPQVDFNGV*LKCIQF
Trigger: GAACTGGATGCATTTCAGCCATACCCCATTGAAATC...CACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCTGGCACGATTTCAATaGGGTATGGCTGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: LPDKPGYTHSGPPPTKCPLARFQ*GMAEMH
Trigger: ATGCATTTCAGCCATACCCCATTGAAATCGTGCCAG...GGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp AAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACTGGCACGATTTCAATaGGGTATGGCTGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: KAFSFQTSLGIHTLALHPLARFQ*GMAEMH
Trigger: ATGCATTTCAGCCATACCCCATTGAAATCGTGCCAG...TGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp ACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCACCAATCCCCGATTTaGACACATGTTGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: THSGPPPTKCPQVRLFSTHQSPI*THVVFA
Trigger: TGCAAAAACAACATGTGTCCAAATCGGGGATTGGTG...GGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp ACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGCACCAATCCCCGATTTaGACACATGTTGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: TKCPQVRLFSTLRWASEKHQSPI*THVVFA
Trigger: TGCAAAAACAACATGTGTCCAAATCGGGGATTGGTG...CTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR CCA 90 bp ATCTCCAAGGATAGTCTTCTCCCATTCCAGCAGCTGGCTCACCAATCCCCGATTTCCCATTCCAGCAGCTaGCTCACCAATCCCCGATTT +
Preference number: 4 (lower is better)
Translates to: ISKDSLLPFQQLAHQSPISHSSS*LTNPRF
Trigger: AAATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGA...AATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGAGAAGACTATCCTTGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp GACACATGTGGCGTAAGAAGGGAAGAATCTGGGCTTCCGGGGAATCTTCTATCCTTCAGTACCCTTCGGTaGGCCTCGGAGAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: DTCGVRREESGLPGNLLSFSTLR*ASEKIS
Trigger: ACTGATCTTCTCCGAGGCCCACCGAAGGGTACTGAA...GGATAGAAGATTCCCCGGAAGCCCAGATTCTTCCCTTCTTACGCCACATGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGGGTATACACACTCTaGCCCTCCACCCACAAAATG +
Preference number: 4 (lower is better)
Translates to: LLLPDKPGYTHSGPPPTKWVYTL*PSTHKM
Trigger: CATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCA...TTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp CTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATACTCAATGGCTGCTTaGGGCACAAGATCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LLLPDKPGYTHSGPPPTKYSMAA*GTRSLP
Trigger: TGGCAAAGATCTTGTGCCTCAAGCAGCCATTGAGTA...TTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR TCA 90 bp ATCTCCAAGGATAGTCTTCTCCCATTCCAGCAGCTGGCTCACCAATCCCCGATTGGTCACAGGCTTGACTaGAATTGCCAACGAAGACCT +
Preference number: 4 (lower is better)
Translates to: ISKDSLLPFQQLAHQSPIGHRLD*NCQRRP
Trigger: AGGTCTTCGTTGGCAATTTCAGTCAAGCCTGTGACC...AATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGAGAAGACTATCCTTGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp AAGGATAGTCTTCTCCCATTCCAGCAGCTGGCTCACCAATCCCCGATTTGGACAGGTCACAGGCTTGACTaGAATTGCCAACGAAGACCT +
Preference number: 4 (lower is better)
Translates to: KDSLLPFQQLAHQSPIWTGHRLD*NCQRRP
Trigger: AGGTCTTCGTTGGCAATTTCAGTCAAGCCTGTGACC...TGTCCAAATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGAGAAGACTATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp GCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACGATGGTGAATTTCAATaGAGTGACACATGTGGCGTA +
Preference number: 4 (lower is better)
Translates to: AKAFSFQTSLGIHTLALHDGEFQ*SDTCGV
Trigger: TACGCCACATGTGTCACTTCATTGAAATTCACCATC...GTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp TCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGTGTTTTTGCACTTCTTaGCATAGGCCCAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: SPSRQAWVYTLWPSTHKMCFCTS*HRPRTS
Trigger: AGAGGTCCTGGGCCTATGTCAAGAAGTGCAAAAACA...CATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000438695.5
CDS-3UTR GCA 90 bp TACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACAGAGTATCTCCAGGGTaGTGCTGTTGTTATCATACA +
Preference number: 4 (lower is better)
Translates to: YTLWPSTHKMPPGEALQYRVSPG*CCCYHT
Trigger: TGTATGATAACAACAGCAGCACCCTGGAGATACTCT...GTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000430497.5
ENST00000438695.5
CDS-3UTR GCA 90 bp AGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCAGCCATACTCAATGGCTaGTTGAGGCACAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: SKGLLLPDKPGYTHSGPPAILNG*LRHKIF
Trigger: AAAGATCTTGTGCCTCAAGCAGCCATTGAGTATGGC...TGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR GCA 90 bp GACACATGTGGCGTAAGAAGGGAAGAATCTGGGCTTCCGGGGAATCTTCTATCCGACCTCTGCAAGGTCTaGTCGTTACTATGCATGAGG +
Preference number: 4 (lower is better)
Translates to: DTCGVRREESGLPGNLLSDLCKV*SLLCMR
Trigger: CCTCATGCATAGTAACGAGCAGACCTTGCAGAGGTC...GGATAGAAGATTCCCCGGAAGCCCAGATTCTTCCCTTCTTACGCCACATGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438695.5
CDS-3UTR CCA 90 bp TCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAATCTGGAGAGTTTTGTaGCCTGATTCAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: SRQAWVYTLWPSTHKMPPIWRVL*PDSGCC
Trigger: ACAACATCCTGAATCAGGCCACAAAACTCTCCAGAT...TGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp GCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAACGTCATACTCCCATTTaGAACGGACATCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: AFSFQTSLGIHTLALHPQRHTPI*NGHPIN
Trigger: GTTTATTGGATGTCCGTTCCAAATGGGAGTATGACG...TTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp GCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAGATTTCAATGGGGTATaGCTGAAATGCATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: AFSFQTSLGIHTLALHPQDFNGV*LKCIQF
Trigger: GAACTGGATGCATTTCAGCCATACCCCATTGAAATC...TTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCTGGCACGATTTCAATaGGGTATGGCTGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: LLPDKPGYTHSGPPPTKCLARFQ*GMAEMH
Trigger: ATGCATTTCAGCCATACCCCATTGAAATCGTGCCAG...GCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAACTGGCACGATTTCAATaGGGTATGGCTGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: PSPSRQAWVYTLWPSTHKLARFQ*GMAEMH
Trigger: ATGCATTTCAGCCATACCCCATTGAAATCGTGCCAG...TTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp TCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGAACGAAGACCTTCCCTaGCACGATTTCAATGGGGTA +
Preference number: 4 (lower is better)
Translates to: SPSRQAWVYTLWPSTHKMNEDLP*HDFNGV
Trigger: TACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTT...CATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAATGGAGACATTGACATaGGCTTTGATTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGEMETLT*ALIFKS
Trigger: GGACTTGAAAATCAAAGCCCATGTCAATGTCTCCAT...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGATGGAGACATTGACATaGGCTTTGATTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: QAWVYTLWPSTHKMPPGEMETLT*ALIFKS
Trigger: GGACTTGAAAATCAAAGCCCATGTCAATGTCTCCAT...CTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTATGGAGACATTGACATaGGCTTTGATTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: HSGPPPTKCPQVRLFSTLMETLT*ALIFKS
Trigger: GGACTTGAAAATCAAAGCCCATGTCAATGTCTCCAT...AAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp ACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGATGGAGACATTGACATaGGCTTTGATTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: TKCPQVRLFSTLRWASEKMETLT*ALIFKS
Trigger: GGACTTGAAAATCAAAGCCCATGTCAATGTCTCCAT...CTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CCAAGGATAGTCTTCTCCCATTCCAGCAGCTGGCTCACCAATCCCCGATTTGGAAAGAAGGGAAGAATCTaGGCTTCCGGGGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: PRIVFSHSSSWLTNPRFGKKGRI*ASGESS
Trigger: AGAAGATTCCCCGGAAGCCCAGATTCTTCCCTTCTT...TCCAAATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGAGAAGACTATCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp GCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCACCAATCCCCGATTTaGACACATGTTGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: AKAFSFQTSLGIHTLALHHQSPI*THVVFA
Trigger: TGCAAAAACAACATGTGTCCAAATCGGGGATTGGTG...GTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp AAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACACCAATCCCCGATTTaGACACATGTTGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: KAFSFQTSLGIHTLALHPHQSPI*THVVFA
Trigger: TGCAAAAACAACATGTGTCCAAATCGGGGATTGGTG...TGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp TCTTCTCCCATTCCAGCAGCTGGCTCACCAATCCCCGATTTGGACACATGTTGTTGGGTATACACACTCTaGCCCTCCACCCACAAAATG +
Preference number: 4 (lower is better)
Translates to: SSPIPAAGSPIPDLDTCCWVYTL*PSTHKM
Trigger: CATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCA...ACAACATGTGTCCAAATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp AGCCACTGCACCGGGCCTGTCAAGGAATTTTTGATAGTATGCCAAGACCATTCGTTGGGGTCACAGGCTTaGCTGAAATTGCCAACGAAG +
Preference number: 4 (lower is better)
Translates to: SHCTGPVKEFLIVCQDHSLGSQA*LKLPTK
Trigger: CTTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAA...CGAATGGTCTTGGCATACTATCAAAAATTCCTTGACAGGCCCGGTGCAGTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR TCA 90 bp AGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCAGATGGTGAATTTCAATaGAGTGACACATGTGGCGTA +
Preference number: 4 (lower is better)
Translates to: SKGLLLPDKPGYTHSGPPDGEFQ*SDTCGV
Trigger: TACGCCACATGTGTCACTTCATTGAAATTCACCATC...TGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR TCA 90 bp TTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATTGTTTTTGCACTTCTTaGCATAGGCCCAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: FSFQTSLGIHTLALHPQNCFCTS*HRPRTS
Trigger: AGAGGTCCTGGGCCTATGTCAAGAAGTGCAAAAACA...ATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000438695.5
CDS-3UTR GCA 90 bp AAGACCATTCGATGGGGGAAAAGGACAGTCATTTCAACAAATGGTGCTAGGAAAGCCAAACACCGGGGTTaGCAGGATGGTCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: KTIRWGKRTVISTNGARKAKHRG*QDGPTA
Trigger: AGCTGTGGGACCATCCTGGCAACCCCGGTGTTTGGC...TTTCCTAGCACCATTTGTTGAAATGACTGTCCTTTTCCCCCATCGAATGGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR GCA 90 bp TTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGAGGCACAAGATCTTTaGCATCACCATCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: FSFQTSLGIHTLALHPQNEAQDL*HHHQSL
Trigger: CAGACTCTGATGGTGATGGCAAAGATCTTGTGCCTC...ATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR CCA 90 bp GACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGATAAACAGAGATAGTTaGGGTCTGTTAATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: DKPGYTHSGPPPTKCPQVINRDS*GLLIWR
Trigger: TCTCCAGATTAACAGACCCCAACTATCTCTGTTTAT...CACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAATAAACAGAGATAGTTaGGGTCTGTTAATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: HKMPPGEALQYPSVGLGEINRDS*GLLIWR
Trigger: TCTCCAGATTAACAGACCCCAACTATCTCTGTTTAT...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
CDS-3UTR CCA 90 bp ACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTATAAACAGAGATAGTTaGGGTCTGTTAATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TLWPSTHKMPPGEALQYPINRDS*GLLIWR
Trigger: TCTCCAGATTAACAGACCCCAACTATCTCTGTTTAT...AGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp AGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACGTCATACTCCCATTTaGAACGGACATCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: SKGLLLPDKPGYTHSGPPRHTPI*NGHPIN
Trigger: GTTTATTGGATGTCCGTTCCAAATGGGAGTATGACG...TGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp AGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACACCAATCCCCGATTTaGACACATGTTGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: SKGLLLPDKPGYTHSGPPHQSPI*THVVFA
Trigger: TGCAAAAACAACATGTGTCCAAATCGGGGATTGGTG...TGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp GACATGGGCTTTGATTTTCAAGTCCTTCTGAATCTTGGGGTCACAGGCTTGACTCCTTCCAGACAAGCCTaGGTATACACACTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: DMGFDFQVLLNLGVTGLTPSRQA*VYTLWP
Trigger: GGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGG...AGTCAAGCCTGTGACCCCAAGATTCAGAAGGACTTGAAAATCAAAGCCCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp AAGACCATTCGATGGGGGAAAAGGACAGTCATTTCAACAAATGGTGCTAGGAAAGCTGAGGCAGAAGAATaGCATGAGCCCGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KTIRWGKRTVISTNGARKAEAEE*HEPGRQ
Trigger: CTGCCTCCCGGGCTCATGCCATTCTTCTGCCTCAGC...TTTCCTAGCACCATTTGTTGAAATGACTGTCCTTTTCCCCCATCGAATGGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR TCA 90 bp TTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATTGGAAAAGATCAGAATaGCAGAGCCAAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: FSFQTSLGIHTLALHPQNWKRSE*QSQGDG
Trigger: ACCATCACCTTGGCTCTGTCATTCTGATCTTTTCCA...ATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000438695.5
CDS-3UTR TCA 90 bp GAAGAATCTGGGCTTCCGGGGAATCTTCTATCCGGATGTGCAGAAGCTTGTCAGTCAATGGGGTATGGCTaGAATGCATCCAGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: EESGLPGNLLSGCAEACQSMGYG*NASSSF
Trigger: AAAGGAACTGGATGCATTTCAGCCATACCCCATTGA...CTGACAAGCTTCTGCACATCCGGATAGAAGATTCCCCGGAAGCCCAGATTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp GTGATGGAATCTCCAAGGATAGTCTTCTCCCATTCCAGCAGCTGGCTCACCAATTGTTTTTGCACTTCTTaGCATAGGCCCAGGACCTCA +
Preference number: 4 (lower is better)
Translates to: VMESPRIVFSHSSSWLTNCFCTS*HRPRTS
Trigger: TGAGGTCCTGGGCCTATGTCAAGAAGTGCAAAAACA...ATTGGTGAGCCAGCTGCTGGAATGGGAGAAGACTATCCTTGGAGATTCCATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430497.5
CDS-3UTR GCA 90 bp TTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGTATCTCCAGGGTGCTaGTGTTGTTATCATACACCA +
Preference number: 4 (lower is better)
Translates to: FSFQTSLGIHTLALHPQNVSPGC*CCYHTP
Trigger: TGGTGTATGATAACAACAGCAGCACCCTGGAGATAC...ATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp TACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACATAAACAGAGATAGTTaGGGTCTGTTAATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: YTLWPSTHKMPPGEALQYINRDS*GLLIWR
Trigger: TCTCCAGATTAACAGACCCCAACTATCTCTGTTTAT...GTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp TCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGGATTTCAATGGGGTATaGCTGAAATGCATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SPSRQAWVYTLWPSTHKMDFNGV*LKCIQF
Trigger: GAACTGGATGCATTTCAGCCATACCCCATTGAAATC...CATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp GAAGAATCTGGGCTTCCGGGGAATCTTCTATCCGGATGTGCAGAAGCTTGTCAGCTGGCACGATTTCAATaGGGTATGGCTGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: EESGLPGNLLSGCAEACQLARFQ*GMAEMH
Trigger: ATGCATTTCAGCCATACCCCATTGAAATCGTGCCAG...CTGACAAGCTTCTGCACATCCGGATAGAAGATTCCCCGGAAGCCCAGATTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp CATTCCAGCAGCTGGCTCACCAATCCCCGATTTGGACACATGTTGTTTTTGCACAACGAAGACCTTCCCTaGCACGATTTCAATGGGGTA +
Preference number: 4 (lower is better)
Translates to: HSSSWLTNPRFGHMLFLHNEDLP*HDFNGV
Trigger: TACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTT...GTGCAAAAACAACATGTGTCCAAATCGGGGATTGGTGAGCCAGCTGCTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp AGCCACTGCACCGGGCCTGTCAAGGAATTTTTGATAGTATGCCAAGACCATTCGAACGAAGACCTTCCCTaGCACGATTTCAATGGGGTA +
Preference number: 4 (lower is better)
Translates to: SHCTGPVKEFLIVCQDHSNEDLP*HDFNGV
Trigger: TACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTT...CGAATGGTCTTGGCATACTATCAAAAATTCCTTGACAGGCCCGGTGCAGTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp CCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGGAGACATTGACATaGGCTTTGATTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: PSPSRQAWVYTLWPSTHKMETLT*ALIFKS
Trigger: GGACTTGAAAATCAAAGCCCATGTCAATGTCTCCAT...TTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp AGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCAATGGAGACATTGACATaGGCTTTGATTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SKGLLLPDKPGYTHSGPPMETLT*ALIFKS
Trigger: GGACTTGAAAATCAAAGCCCATGTCAATGTCTCCAT...TGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CCA 90 bp GACATTGACATGGGCTTTGATTTTCAAGTCCTTCTGAATCTTGGGGTCACAGGCTCCCATTCCAGCAGCTaGCTCACCAATCCCCGATTT +
Preference number: 4 (lower is better)
Translates to: DIDMGFDFQVLLNLGVTGSHSSS*LTNPRF
Trigger: AAATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGA...GCCTGTGACCCCAAGATTCAGAAGGACTTGAAAATCAAAGCCCATGTCAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR GCA 90 bp AGCCACTGCACCGGGCCTGTCAAGGAATTTTTGATAGTATGCCAAGACCATTCGGTATCTCCAGGGTGCTaGTGTTGTTATCATACACCA +
Preference number: 4 (lower is better)
Translates to: SHCTGPVKEFLIVCQDHSVSPGC*CCYHTP
Trigger: TGGTGTATGATAACAACAGCAGCACCCTGGAGATAC...CGAATGGTCTTGGCATACTATCAAAAATTCCTTGACAGGCCCGGTGCAGTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp CGTAAGAAGGGAAGAATCTGGGCTTCCGGGGAATCTTCTATCCGGATGTGCAGAGATTTCAATGGGGTATaGCTGAAATGCATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RKKGRIWASGESSIRMCRDFNGV*LKCIQF
Trigger: GAACTGGATGCATTTCAGCCATACCCCATTGAAATC...TCTGCACATCCGGATAGAAGATTCCCCGGAAGCCCAGATTCTTCCCTTCTTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp AGCCACTGCACCGGGCCTGTCAAGGAATTTTTGATAGTATGCCAAGACCATTCGCTGGCACGATTTCAATaGGGTATGGCTGAAATGCAT +
Preference number: 4 (lower is better)
Translates to: SHCTGPVKEFLIVCQDHSLARFQ*GMAEMH
Trigger: ATGCATTTCAGCCATACCCCATTGAAATCGTGCCAG...CGAATGGTCTTGGCATACTATCAAAAATTCCTTGACAGGCCCGGTGCAGTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp ATCTCCAAGGATAGTCTTCTCCCATTCCAGCAGCTGGCTCACCAATCCCCGATTCACCAATCCCCGATTTaGACACATGTTGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: ISKDSLLPFQQLAHQSPIHQSPI*THVVFA
Trigger: TGCAAAAACAACATGTGTCCAAATCGGGGATTGGTG...AATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGAGAAGACTATCCTTGGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp ATCCATGGAGACATTGACATGGGCTTTGATTTTCAAGTCCTTCTGAATCTTGGGCCTTCCAGACAAGCCTaGGTATACACACTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: IHGDIDMGFDFQVLLNLGPSRQA*VYTLWP
Trigger: GGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGG...CCCAAGATTCAGAAGGACTTGAAAATCAAAGCCCATGTCAATGTCTCCATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp GGGCCCTGTATCCATGGAGACATTGACATGGGCTTTGATTTTCAAGTCCTTCTGTCAATGGGGTATGGCTaGAATGCATCCAGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GPCIHGDIDMGFDFQVLLSMGYG*NASSSF
Trigger: AAAGGAACTGGATGCATTTCAGCCATACCCCATTGA...CAGAAGGACTTGAAAATCAAAGCCCATGTCAATGTCTCCATGGATACAGGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp GACATTGACATGGGCTTTGATTTTCAAGTCCTTCTGAATCTTGGGGTCACAGGCAGGACCTCAATGAAGTaGCACATGTGGCGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: DIDMGFDFQVLLNLGVTGRTSMK*HMWRKK
Trigger: CTTCTTACGCCACATGTGTCACTTCATTGAGGTCCT...GCCTGTGACCCCAAGATTCAGAAGGACTTGAAAATCAAAGCCCATGTCAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430497.5
CDS-3UTR GCA 90 bp GACATTGACATGGGCTTTGATTTTCAAGTCCTTCTGAATCTTGGGGTCACAGGCGGGGTATGGCTGAAATaGATCCAGTTCCTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: DIDMGFDFQVLLNLGVTGGVWLK*IQFLCH
Trigger: ATGGCAAAGGAACTGGATGCATTTCAGCCATACCCC...GCCTGTGACCCCAAGATTCAGAAGGACTTGAAAATCAAAGCCCATGTCAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp AATCGATACACCGCTAGCCAGGCTAACTTAAACAGAAGACACAAATTACTAATAAAAGTGGTACGTGCCTaGGAAGCGCTCATAGCCCCC +
Preference number: 4 (lower is better)
Translates to: NRYTASQANLNRRHKLLIKVVRA*EALIAP
Trigger: GGGGGCTATGAGCGCTTCTCAGGCACGTACCACTTT...TATTAGTAATTTGTGTCTTCTGTTTAAGTTAGCCTGGCTAGCGGTGTATCGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR TCA 90 bp AAGACCATTCGATGGGGGAAAAGGACAGTCATTTCAACAAATGGTGCTAGGAAAGGTCACAGGCTTGACTaGAATTGCCAACGAAGACCT +
Preference number: 4 (lower is better)
Translates to: KTIRWGKRTVISTNGARKGHRLD*NCQRRP
Trigger: AGGTCTTCGTTGGCAATTTCAGTCAAGCCTGTGACC...TTTCCTAGCACCATTTGTTGAAATGACTGTCCTTTTCCCCCATCGAATGGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR GCA 90 bp GGGCCCTGTATCCATGGAGACATTGACATGGGCTTTGATTTTCAAGTCCTTCTGAGAGTATCTCCAGGGTaGTGCTGTTGTTATCATACA +
Preference number: 4 (lower is better)
Translates to: GPCIHGDIDMGFDFQVLLRVSPG*CCCYHT
Trigger: TGTATGATAACAACAGCAGCACCCTGGAGATACTCT...CAGAAGGACTTGAAAATCAAAGCCCATGTCAATGTCTCCATGGATACAGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CCA 90 bp GAAACAGACAATCTGAATAGGCCTACATATATTAAAGAAATTGAGTGGTGGCAGTGGGTCCGGAGAAAGTaGTACGTGCCTGAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: ETDNLNRPTYIKEIEWWQWVRRK*YVPEKR
Trigger: GCGCTTCTCAGGCACGTACCACTTTCTCCGGACCCA...CTGCCACCACTCAATTTCTTTAATATATGTAGGCCTATTCAGATTGTCTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp GACATTGACATGGGCTTTGATTTTCAAGTCCTTCTGAATCTTGGGGTCACAGGCCACCAATCCCCGATTTaGACACATGTTGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: DIDMGFDFQVLLNLGVTGHQSPI*THVVFA
Trigger: TGCAAAAACAACATGTGTCCAAATCGGGGATTGGTG...GCCTGTGACCCCAAGATTCAGAAGGACTTGAAAATCAAAGCCCATGTCAATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR GCA 90 bp GAAACAGACAATCTGAATAGGCCTACATATATTAAAGAAATTGAGTGGTGGCAGGGAGAAAGTGGTACGTaGCTGAGAAGCGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: ETDNLNRPTYIKEIEWWQGESGT*LRSAHS
Trigger: GCTATGAGCGCTTCTCAGGCACGTACCACTTTCTCC...CTGCCACCACTCAATTTCTTTAATATATGTAGGCCTATTCAGATTGTCTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR TCA 90 bp AAGACCATTCGATGGGGGAAAAGGACAGTCATTTCAACAAATGGTGCTAGGAAAGATGGTGAATTTCAATaGAGTGACACATGTGGCGTA +
Preference number: 4 (lower is better)
Translates to: KTIRWGKRTVISTNGARKDGEFQ*SDTCGV
Trigger: TACGCCACATGTGTCACTTCATTGAAATTCACCATC...TTTCCTAGCACCATTTGTTGAAATGACTGTCCTTTTCCCCCATCGAATGGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp CTGGCTCACCAATCCCCGATTTGGACACATGTTGTTTTTGCACTTCTTGACATAATGGAGACATTGACATaGGCTTTGATTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LAHQSPIWTHVVFALLDIMETLT*ALIFKS
Trigger: GGACTTGAAAATCAAAGCCCATGTCAATGTCTCCAT...TATGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCGGGGATTGGTGAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR TCA 90 bp GTCATTTCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAATACTCAATGGCTGCTTaGGGCACAAGATCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: VISTNGARKTRYAMQRMKYSMAA*GTRSLP
Trigger: TGGCAAAGATCTTGTGCCTCAAGCAGCCATTGAGTA...TTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGAAATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR GCA 90 bp GAAACAGACAATCTGAATAGGCCTACATATATTAAAGAAATTGAGTGGTGGCAGGAGGCACAAGATCTTTaGCATCACCATCAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ETDNLNRPTYIKEIEWWQEAQDL*HHHQSL
Trigger: CAGACTCTGATGGTGATGGCAAAGATCTTGTGCCTC...CTGCCACCACTCAATTTCTTTAATATATGTAGGCCTATTCAGATTGTCTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR GCA 90 bp TCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAATTGAAATCCGTCTGCAAGGTCTaGTCGTTACTATGCATGAGG +
Preference number: 4 (lower is better)
Translates to: STNGARKTRYAMQRMKLKSVCKV*SLLCMR
Trigger: CCTCATGCATAGTAACGAGCAGACCTTGCAGACGGA...TTTCAATTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR GCA 90 bp TCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAATTGAAAAGTGAGTCGAGATTGTaGTACTGTACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: STNGARKTRYAMQRMKLKSESRL*YCTPAW
Trigger: CCAGGCTGGAGTACAGTAGCACAATCTCGACTCACT...TTTCAATTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR GCA 90 bp AAGACCATTCGATGGGGGAAAAGGACAGTCATTTCAACAAATGGTGCTAGGAAATTGAAAGACACAGACTaGCAAAACTCACACAAGAAG +
Preference number: 4 (lower is better)
Translates to: KTIRWGKRTVISTNGARKLKDTD*QNSHKK
Trigger: CTTCTTGTGTGAGTTTTGGCAGTCTGTGTCTTTCAA...TTTCCTAGCACCATTTGTTGAAATGACTGTCCTTTTCCCCCATCGAATGGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR GCA 90 bp AATCGATACACCGCTAGCCAGGCTAACTTAAACAGAAGACACAAATTACTAATAGCCATACTCAATGGCTaGTTGAGGCACAAGATCTTT +
Preference number: 4 (lower is better)
Translates to: NRYTASQANLNRRHKLLIAILNG*LRHKIF
Trigger: AAAGATCTTGTGCCTCAAGCAGCCATTGAGTATGGC...TATTAGTAATTTGTGTCTTCTGTTTAAGTTAGCCTGGCTAGCGGTGTATCGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR GCA 90 bp ATATTCATATCCACAAATGTGATTGATCAATTCCTTGAAAGACACAGACTGCCATCTTCTATCCGGATGTaGAGAAGCTTGTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: IFISTNVIDQFLERHRLPSSIRM*RSLSAS
Trigger: CGATGCTGACAAGCTTCTGCACATCCGGATAGAAGA...TGGCAGTCTGTGTCTTTCAAGGAATTGATCAATCACATTTGTGGATATGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp GTCATTTCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAATGGGGTCTGTTAATCTaGAGAGTTTTGTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: VISTNGARKTRYAMQRMKWGLLI*RVLWPD
Trigger: ATCAGGCCACAAAACTCTCCAGATTAACAGACCCCA...TTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGAAATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp TCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAATTGAAAAGGGCAGTGATCACATaGCTTTCGTCATACTCCCAT +
Preference number: 4 (lower is better)
Translates to: STNGARKTRYAMQRMKLKRAVIT*LSSYSH
Trigger: ATGGGAGTATGACGAAAGCCATGTGATCACTGCCCT...TTTCAATTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp TCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAATTGAAAATCCAGATGATCTTCTaGGTCCGGAGAAAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: STNGARKTRYAMQRMKLKIQMIF*VRRKWY
Trigger: GTACCACTTTCTCCGGACCCAGAAGATCATCTGGAT...TTTCAATTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp TCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAATTGAAAAAGAAGGGAAGAATCTaGGCTTCCGGGGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: STNGARKTRYAMQRMKLKKKGRI*ASGESS
Trigger: AGAAGATTCCCCGGAAGCCCAGATTCTTCCCTTCTT...TTTCAATTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp TCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAATTGAAAGCAAACCAGGCATCCTaGAAAAATGGCTCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: STNGARKTRYAMQRMKLKANQAS*KNGSSK
Trigger: CTTAGAGGAGCCATTTTTCCAGGATGCCTGGTTTGC...TTTCAATTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp GTCATTTCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAAAAAGAAATTGAGTGGTaGCAGATGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: VISTNGARKTRYAMQRMKKEIEW*QMPVVP
Trigger: TGGGACTACAGGCATCTGCCACCACTCAATTTCTTT...TTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGAAATGAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR TCA 90 bp TCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAATTGAAATGGAAAAGATCAGAATaGCAGAGCCAAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: STNGARKTRYAMQRMKLKWKRSE*QSQGDG
Trigger: ACCATCACCTTGGCTCTGTCATTCTGATCTTTTCCA...TTTCAATTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR GCA 90 bp GAAACAGACAATCTGAATAGGCCTACATATATTAAAGAAATTGAGTGGTGGCAGAGAGTATCTCCAGGGTaGTGCTGTTGTTATCATACA +
Preference number: 4 (lower is better)
Translates to: ETDNLNRPTYIKEIEWWQRVSPG*CCCYHT
Trigger: TGTATGATAACAACAGCAGCACCCTGGAGATACTCT...CTGCCACCACTCAATTTCTTTAATATATGTAGGCCTATTCAGATTGTCTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp ATATTCATATCCACAAATGTGATTGATCAATTCCTTGAAAGACACAGACTGCCAATCTGGAGAGTTTTGTaGCCTGATTCAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: IFISTNVIDQFLERHRLPIWRVL*PDSGCC
Trigger: ACAACATCCTGAATCAGGCCACAAAACTCTCCAGAT...TGGCAGTCTGTGTCTTTCAAGGAATTGATCAATCACATTTGTGGATATGAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp TCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAATTGAAACGTCATACTCCCATTTaGAACGGACATCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: STNGARKTRYAMQRMKLKRHTPI*NGHPIN
Trigger: GTTTATTGGATGTCCGTTCCAAATGGGAGTATGACG...TTTCAATTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp TCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAATTGAAAGATTTCAATGGGGTATaGCTGAAATGCATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: STNGARKTRYAMQRMKLKDFNGV*LKCIQF
Trigger: GAACTGGATGCATTTCAGCCATACCCCATTGAAATC...TTTCAATTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp GAAACAGACAATCTGAATAGGCCTACATATATTAAAGAAATTGAGTGGTGGCAGATGGAGACATTGACATaGGCTTTGATTTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: ETDNLNRPTYIKEIEWWQMETLT*ALIFKS
Trigger: GGACTTGAAAATCAAAGCCCATGTCAATGTCTCCAT...CTGCCACCACTCAATTTCTTTAATATATGTAGGCCTATTCAGATTGTCTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CCA 90 bp GTCATTTCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAAATAAACAGAGATAGTTaGGGTCTGTTAATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VISTNGARKTRYAMQRMKINRDS*GLLIWR
Trigger: TCTCCAGATTAACAGACCCCAACTATCTCTGTTTAT...TTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGAAATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS CCA 90 bp CAAGGGCAGAAGGAATGGGTTTGGCTGAGGTCGGGGGCTCGGGTCTaGGACGCGCTCCACCTCCCCGGCTGCGCGACTATGGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: QGQKEWVWLRSGARV*DALHLPGCATMARL
Trigger: GAGCCTGGCCATAGTCGCGCAGCCGGGGAGGTGGAGCGCGTCCCAGACCCGAGCCCCCGACCTCAGCCAAACCCATTCCTTCTGCCCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS GCA 90 bp CTAAGGCGCTTCCAGCCTAAAGCCCGTCCTCTTCCACCTCTTGGGTaGAGACTGGCCCTCCCACTCCGACCGCAGGTCCCCCACCGGCCA +
Preference number: 5 (lower is better)
Translates to: LRRFQPKARPLPPLG*RLALPLRPQVPHRP
Trigger: TGGCCGGTGGGGGACCTGCGGTCGGAGTGGGAGGGCCAGTCTGCACCCAAGAGGTGGAAGAGGACGGGCTTTAGGCTGGAAGCGCCTTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
ENST00000474328.5
CDS CCA 90 bp GCTTCCAGCCTAAAGCCCGTCCTCTTCCACCTCTTGGGTGCAGACTaGCCCTCCCACTCCGACCGCAGGTCCCCCACCGGCCACACAGAC +
Preference number: 5 (lower is better)
Translates to: ASSLKPVLFHLLGAD*PSHSDRRSPTGHTD
Trigger: GTCTGTGTGGCCGGTGGGGGACCTGCGGTCGGAGTGGGAGGGCCAGTCTGCACCCAAGAGGTGGAAGAGGACGGGCTTTAGGCTGGAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
ENST00000474328.5
CDS-3UTR CAA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAGCCAAACACCGGGGTaGCCAGGATGGTCCCACAGC +
Preference number: 5 (lower is better)
Translates to: PTKCPQVRLFSTLRWASESQTPG*PGWSHS
Trigger: GCTGTGGGACCATCCTGGCAACCCCGGTGTTTGGCT...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp CTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGAGCCAAACACCGGGGTaGCCAGGATGGTCCCACAGC +
Preference number: 5 (lower is better)
Translates to: LWPSTHKMPPGEALQYPSSQTPG*PGWSHS
Trigger: GCTGTGGGACCATCCTGGCAACCCCGGTGTTTGGCT...CGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp AAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGAGCCAAACACCGGGGTaGCCAGGATGGTCCCACAGC +
Preference number: 5 (lower is better)
Translates to: KPGYTHSGPPPTKCPQVRSQTPG*PGWSHS
Trigger: GCTGTGGGACCATCCTGGCAACCCCGGTGTTTGGCT...CCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp GGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCGTCCTCTTCCACCTCTaGGGTGCAGACTGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GYTHSGPPPTKCPQVRLFVLFHL*GADWPS
Trigger: GGAGGGCCAGTCTGCACCCAAGAGGTGGAAGAGGAC...GAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp ACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGGTCCTCTTCCACCTCTaGGGTGCAGACTGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: TKCPQVRLFSTLRWASEKVLFHL*GADWPS
Trigger: GGAGGGCCAGTCTGCACCCAAGAGGTGGAAGAGGAC...CTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
CDS-3UTR CAA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGTCCTCTTCCACCTCTaGGGTGCAGACTGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: HKMPPGEALQYPSVGLGEVLFHL*GADWPS
Trigger: GGAGGGCCAGTCTGCACCCAAGAGGTGGAAGAGGAC...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
CDS-3UTR CAA 90 bp CAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCAGAAGGAATGGGTTaGGCTGAGGTCGGGGGCTCG +
Preference number: 5 (lower is better)
Translates to: QAWVYTLWPSTHKMPPGEAEGMG*AEVGGS
Trigger: CGAGCCCCCGACCTCAGCCAAACCCATTCCTTCTGC...CTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp TACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACGTCCTCTTCCACCTCTaGGGTGCAGACTGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: YTLWPSTHKMPPGEALQYVLFHL*GADWPS
Trigger: GGAGGGCCAGTCTGCACCCAAGAGGTGGAAGAGGAC...GTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp CAGGCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCGCAGAAGGAATGGGTTaGGCTGAGGTCGGGGGCTCG +
Preference number: 5 (lower is better)
Translates to: QAAKAFSFQTSLGIHTLAAEGMG*AEVGGS
Trigger: CGAGCCCCCGACCTCAGCCAAACCCATTCCTTCTGC...GGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS TCA 90 bp AGAAGCGCTCATAGCCCCCTTTCAGGATGTAGACGGGGTGGTGGGTaGGGCGGGTCAGGATCCTGCCATACTCAATGGCTGCTTGAGGCA +
Preference number: 5 (lower is better)
Translates to: RSAHSPLSGCRRGGG*GGSGSCHTQWLLEA
Trigger: TGCCTCAAGCAGCCATTGAGTATGGCAGGATCCTGACCCGCCTCACCCACCACCCCGTCTACATCCTGAAAGGGGGCTATGAGCGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
ENST00000451157.1
ENST00000454618.5
ENST00000460184.2
CDS-3UTR CAA 90 bp CCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAGCAGAAGGAATGGGTTaGGCTGAGGTCGGGGGCTCG +
Preference number: 5 (lower is better)
Translates to: PSPSRQAWVYTLWPSTHKAEGMG*AEVGGS
Trigger: CGAGCCCCCGACCTCAGCCAAACCCATTCCTTCTGC...TTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGTCCAGGGTGCTGCTGTaGTTATCATACACCACGCAG +
Preference number: 5 (lower is better)
Translates to: PTKCPQVRLFSTLRWASESRVLL*LSYTTQ
Trigger: CTGCGTGGTGTATGATAACAACAGCAGCACCCTGGA...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR CAA 90 bp CTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAAAGCCAAACACCGGGGTaGCCAGGATGGTCCCACAGC +
Preference number: 5 (lower is better)
Translates to: LLLPDKPGYTHSGPPPTKSQTPG*PGWSHS
Trigger: GCTGTGGGACCATCCTGGCAACCCCGGTGTTTGGCT...TTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGCTTGGGGTCACAGGCTaGACTGAAATTGCCAACGAA +
Preference number: 5 (lower is better)
Translates to: PTKCPQVRLFSTLRWASELGVTG*TEIANE
Trigger: TTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAAG...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS TCA 90 bp AGGCATCCAGATGATCTTCTGGGTCCGGAGAAAGTGGTACGTGCCTaGGAAGCGCTCATAGCCCCCTTTCAGGATGTAGACGGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: RHPDDLLGPEKVVRA*EALIAPFQDVDGVV
Trigger: CACCACCCCGTCTACATCCTGAAAGGGGGCTATGAGCGCTTCTCAGGCACGTACCACTTTCTCCGGACCCAGAAGATCATCTGGATGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
ENST00000451157.1
ENST00000454618.5
CDS-3UTR CAA 90 bp AGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACCGGATGTGCAGAAGCTaGTCAGCATCGCCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: RPSPSRQAWVYTLWPSTHRMCRS*SASPAK
Trigger: TTTTGCAGGCGATGCTGACAAGCTTCTGCACATCCG...GTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAACGGATGTGCAGAAGCTaGTCAGCATCGCCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: HKMPPGEALQYPSVGLGERMCRS*SASPAK
Trigger: TTTTGCAGGCGATGCTGACAAGCTTCTGCACATCCG...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR CAA 90 bp CAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGCGGATGTGCAGAAGCTaGTCAGCATCGCCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: QTSLGIHTLALHPQNAPRRMCRS*SASPAK
Trigger: TTTTGCAGGCGATGCTGACAAGCTTCTGCACATCCG...CCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp GCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCTCCAGGGTGCTGCTGTaGTTATCATACACCACGCAG +
Preference number: 5 (lower is better)
Translates to: AAKAFSFQTSLGIHTLALSRVLL*LSYTTQ
Trigger: CTGCGTGGTGTATGATAACAACAGCAGCACCCTGGA...GAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR CAA 90 bp AAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGATTCCAGGGTGCTGCTGTaGTTATCATACACCACGCAG +
Preference number: 5 (lower is better)
Translates to: KMPPGEALQYPSVGLGEDSRVLL*LSYTTQ
Trigger: CTGCGTGGTGTATGATAACAACAGCAGCACCCTGGA...ATCTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp GCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCGGATGTGCAGAAGCTaGTCAGCATCGCCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: AAKAFSFQTSLGIHTLALRMCRS*SASPAK
Trigger: TTTTGCAGGCGATGCTGACAAGCTTCTGCACATCCG...GAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp CCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAATCCAGGGTGCTGCTGTaGTTATCATACACCACGCAG +
Preference number: 5 (lower is better)
Translates to: PSPSRQAWVYTLWPSTHKSRVLL*LSYTTQ
Trigger: CTGCGTGGTGTATGATAACAACAGCAGCACCCTGGA...TTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR CAA 90 bp GACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGATACTCAATGGCTGCTaGAGGCACAAGATCTTTGCC +
Preference number: 5 (lower is better)
Translates to: DKPGYTHSGPPPTKCPQVILNGC*RHKIFA
Trigger: GGCAAAGATCTTGTGCCTCAAGCAGCCATTGAGTAT...CACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR CAA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAATACTCAATGGCTGCTaGAGGCACAAGATCTTTGCC +
Preference number: 5 (lower is better)
Translates to: HKMPPGEALQYPSVGLGEILNGC*RHKIFA
Trigger: GGCAAAGATCTTGTGCCTCAAGCAGCCATTGAGTAT...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
CDS-3UTR CAA 90 bp AAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACTTGGGGTCACAGGCTaGACTGAAATTGCCAACGAA +
Preference number: 5 (lower is better)
Translates to: KAFSFQTSLGIHTLALHPLGVTG*TEIANE
Trigger: TTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAAG...TGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp GTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGCTTGGGGTCACAGGCTaGACTGAAATTGCCAACGAA +
Preference number: 5 (lower is better)
Translates to: VYTLWPSTHKMPPGEALQLGVTG*TEIANE
Trigger: TTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAAG...CTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp CCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCTTGGGGTCACAGGCTaGACTGAAATTGCCAACGAA +
Preference number: 5 (lower is better)
Translates to: PSRQAWVYTLWPSTHKMPLGVTG*TEIANE
Trigger: TTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAAG...GGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp CCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGGTATCCATGGAGACATaGACATGGGCTTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: PTKCPQVRLFSTLRWASEVSMET*TWALIF
Trigger: GAAAATCAAAGCCCATGTCAATGTCTCCATGGATAC...CTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR CAA 90 bp CTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCGGATGTGCAGAAGCTaGTCAGCATCGCCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: LLPDKPGYTHSGPPPTKCRMCRS*SASPAK
Trigger: TTTTGCAGGCGATGCTGACAAGCTTCTGCACATCCG...GCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp TCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCTCACCAATCCCCGATTaGGACACATGTTGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: STHKMPPGEALQYPSVGLSPIPD*DTCCFC
Trigger: GCAAAAACAACATGTGTCCAAATCGGGGATTGGTGA...GAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp CTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCATACTCAATGGCTGCTaGAGGCACAAGATCTTTGCC +
Preference number: 5 (lower is better)
Translates to: LPDKPGYTHSGPPPTKCPILNGC*RHKIFA
Trigger: GGCAAAGATCTTGTGCCTCAAGCAGCCATTGAGTAT...GGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000248600.5
ENST00000359697.8
CDS-3UTR CAA 90 bp CTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCTTGGGGTCACAGGCTaGACTGAAATTGCCAACGAA +
Preference number: 5 (lower is better)
Translates to: LLPDKPGYTHSGPPPTKCLGVTG*TEIANE
Trigger: TTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAAG...GCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp TCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCGGATGTGCAGAAGCTaGTCAGCATCGCCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: SPSRQAWVYTLWPSTHKMRMCRS*SASPAK
Trigger: TTTTGCAGGCGATGCTGACAAGCTTCTGCACATCCG...CATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAATCACCAATCCCCGATTaGGACACATGTTGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: HKMPPGEALQYPSVGLGESPIPD*DTCCFC
Trigger: GCAAAAACAACATGTGTCCAAATCGGGGATTGGTGA...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR CAA 90 bp CAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTCACCAATCCCCGATTaGGACACATGTTGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: QTSLGIHTLALHPQNAPRSPIPD*DTCCFC
Trigger: GCAAAAACAACATGTGTCCAAATCGGGGATTGGTGA...CCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp ACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGTCACCAATCCCCGATTaGGACACATGTTGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: TKCPQVRLFSTLRWASEKSPIPD*DTCCFC
Trigger: GCAAAAACAACATGTGTCCAAATCGGGGATTGGTGA...CTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR CAA 90 bp AAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGTCGTCATACTCCCATTaGGAACGGACATCCAATAAA +
Preference number: 5 (lower is better)
Translates to: KPGYTHSGPPPTKCPQVRSSYSH*ERTSNK
Trigger: TTTATTGGATGTCCGTTCCAAATGGGAGTATGACGA...CCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp ACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAAGTCGTCATACTCCCATTaGGAACGGACATCCAATAAA +
Preference number: 5 (lower is better)
Translates to: TKCPQVRLFSTLRWASEKSSYSH*ERTSNK
Trigger: TTTATTGGATGTCCGTTCCAAATGGGAGTATGACGA...CTTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
CDS-3UTR CAA 90 bp CCCTTCGGTGGGCCTCGGAGAAGATCAGTAGAGCGGATCCATGATGTTTGTGATCTTGGGGTCACAGGCTaGACTGAAATTGCCAACGAA +
Preference number: 5 (lower is better)
Translates to: PFGGPRRRSVERIHDVCDLGVTG*TEIANE
Trigger: TTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAAG...ATCACAAACATCATGGATCCGCTCTACTGATCTTCTCCGAGGCCCACCGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp GGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCGTATCCATGGAGACATaGACATGGGCTTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: GYTHSGPPPTKCPQVRLFVSMET*TWALIF
Trigger: GAAAATCAAAGCCCATGTCAATGTCTCCATGGATAC...GAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp TCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCCGATTTGGACACATGTaGTTTTTGCACTTCTTGACA +
Preference number: 5 (lower is better)
Translates to: STHKMPPGEALQYPSVGLRFGHM*FLHFLT
Trigger: TGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCG...GAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp TCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCATCACCAATCCCCGATTaGGACACATGTTGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: SRQAWVYTLWPSTHKMPPSPIPD*DTCCFC
Trigger: GCAAAAACAACATGTGTCCAAATCGGGGATTGGTGA...TGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp AAGACCATTCGATGGGGGAAAAGGACAGTCATTTCAACAAATGGTGCTAGGAAAAGCCAAACACCGGGGTaGCCAGGATGGTCCCACAGC +
Preference number: 5 (lower is better)
Translates to: KTIRWGKRTVISTNGARKSQTPG*PGWSHS
Trigger: GCTGTGGGACCATCCTGGCAACCCCGGTGTTTGGCT...TTTCCTAGCACCATTTGTTGAAATGACTGTCCTTTTCCCCCATCGAATGGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CAA 90 bp AAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCATCGTCATACTCCCATTaGGAACGGACATCCAATAAA +
Preference number: 5 (lower is better)
Translates to: KAFSFQTSLGIHTLALHPSSYSH*ERTSNK
Trigger: TTTATTGGATGTCCGTTCCAAATGGGAGTATGACGA...TGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp TCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCATCGTCATACTCCCATTaGGAACGGACATCCAATAAA +
Preference number: 5 (lower is better)
Translates to: SRQAWVYTLWPSTHKMPPSSYSH*ERTSNK
Trigger: TTTATTGGATGTCCGTTCCAAATGGGAGTATGACGA...TGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp AGCCACTGCACCGGGCCTGTCAAGGAATTTTTGATAGTATGCCAAGACCATTCGTCCAGGGTGCTGCTGTaGTTATCATACACCACGCAG +
Preference number: 5 (lower is better)
Translates to: SHCTGPVKEFLIVCQDHSSRVLL*LSYTTQ
Trigger: CTGCGTGGTGTATGATAACAACAGCAGCACCCTGGA...CGAATGGTCTTGGCATACTATCAAAAATTCCTTGACAGGCCCGGTGCAGTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CAA 90 bp GGCAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTGTATCCATGGAGACATaGACATGGGCTTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: GSKGLLLPDKPGYTHSGPVSMET*TWALIF
Trigger: GAAAATCAAAGCCCATGTCAATGTCTCCATGGATAC...AGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp TCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGTATCCATGGAGACATaGACATGGGCTTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: SRQAWVYTLWPSTHKMPPVSMET*TWALIF
Trigger: GAAAATCAAAGCCCATGTCAATGTCTCCATGGATAC...TGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp ACACACTCTGGCCCTCCACCCACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCGATTTGGACACATGTaGTTTTTGCACTTCTTGACA +
Preference number: 5 (lower is better)
Translates to: THSGPPPTKCPQVRLFSTRFGHM*FLHFLT
Trigger: TGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCG...GGTACTGAAGAGCCTCACCTGGGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp CACAAAATGCCCCCAGGTGAGGCTCTTCAGTACCCTTCGGTGGGCCTCGGAGAACGATTTGGACACATGTaGTTTTTGCACTTCTTGACA +
Preference number: 5 (lower is better)
Translates to: HKMPPGEALQYPSVGLGERFGHM*FLHFLT
Trigger: TGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCG...TTCTCCGAGGCCCACCGAAGGGTACTGAAGAGCCTCACCTGGGGGCATTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
CDS-3UTR CAA 90 bp AGCCACTGCACCGGGCCTGTCAAGGAATTTTTGATAGTATGCCAAGACCATTCGTGCAGTGAGTCGAGATaGTGCTACTGTACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SHCTGPVKEFLIVCQDHSCSESR*CYCTPA
Trigger: GGCTGGAGTACAGTAGCACAATCTCGACTCACTGCA...CGAATGGTCTTGGCATACTATCAAAAATTCCTTGACAGGCCCGGTGCAGTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CAA 90 bp AGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCAGTATCCATGGAGACATaGACATGGGCTTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: SKGLLLPDKPGYTHSGPPVSMET*TWALIF
Trigger: GAAAATCAAAGCCCATGTCAATGTCTCCATGGATAC...TGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp CTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCCGATTTGGACACATGTaGTTTTTGCACTTCTTGACA +
Preference number: 5 (lower is better)
Translates to: LPDKPGYTHSGPPPTKCPRFGHM*FLHFLT
Trigger: TGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCG...GGGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp CAGCAAAGGCCTTCTCCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCCGATTTGGACACATGTaGTTTTTGCACTTCTTGACA +
Preference number: 5 (lower is better)
Translates to: QQRPSPSRQAWVYTLWPSRFGHM*FLHFLT
Trigger: TGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCG...GGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGGAGAAGGCCTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
CDS-3UTR CAA 90 bp CCTTCCAGACAAGCCTGGGTATACACACTCTGGCCCTCCACCCACAAAATGCCCCGATTTGGACACATGTaGTTTTTGCACTTCTTGACA +
Preference number: 5 (lower is better)
Translates to: PSRQAWVYTLWPSTHKMPRFGHM*FLHFLT
Trigger: TGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCG...GGGCATTTTGTGGGTGGAGGGCCAGAGTGTGTATACCCAGGCTTGTCTGGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp GATGGAATCTCCAAGGATAGTCTTCTCCCATTCCAGCAGCTGGCTCACCAATCCATGCATCCAGTTCCTTaGCCATCACCATCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: DGISKDSLLPFQQLAHQSMHPVP*PSPSES
Trigger: AGACTCTGATGGTGATGGCAAAGGAACTGGATGCAT...GGATTGGTGAGCCAGCTGCTGGAATGGGAGAAGACTATCCTTGGAGATTCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS CCA 90 bp GAAATTGCCAACGAAGACCTTCCCTGGCACGATTTCAATGGGGTATaGCTGAAATGCATCCAGTTCCTTTGCCATCACCATCAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: EIANEDLPWHDFNGV*LKCIQFLCHHHQSL
Trigger: CAGACTCTGATGGTGATGGCAAAGGAACTGGATGCATTTCAGCCATACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTTGGCAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp AGCCACTGCACCGGGCCTGTCAAGGAATTTTTGATAGTATGCCAAGACCATTCGATACTCAATGGCTGCTaGAGGCACAAGATCTTTGCC +
Preference number: 5 (lower is better)
Translates to: SHCTGPVKEFLIVCQDHSILNGC*RHKIFA
Trigger: GGCAAAGATCTTGTGCCTCAAGCAGCCATTGAGTAT...CGAATGGTCTTGGCATACTATCAAAAATTCCTTGACAGGCCCGGTGCAGTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CAA 90 bp GTGATGGAATCTCCAAGGATAGTCTTCTCCCATTCCAGCAGCTGGCTCACCAATATGCATCCAGTTCCTTaGCCATCACCATCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: VMESPRIVFSHSSSWLTNMHPVP*PSPSES
Trigger: AGACTCTGATGGTGATGGCAAAGGAACTGGATGCAT...ATTGGTGAGCCAGCTGCTGGAATGGGAGAAGACTATCCTTGGAGATTCCATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp GTCATTTCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAAGTCCTCTTCCACCTCTaGGGTGCAGACTGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: VISTNGARKTRYAMQRMKVLFHL*GADWPS
Trigger: GGAGGGCCAGTCTGCACCCAAGAGGTGGAAGAGGAC...TTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGAAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CAA 90 bp ATCTCCAAGGATAGTCTTCTCCCATTCCAGCAGCTGGCTCACCAATCCCCGATTGTATCCATGGAGACATaGACATGGGCTTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: ISKDSLLPFQQLAHQSPIVSMET*TWALIF
Trigger: GAAAATCAAAGCCCATGTCAATGTCTCCATGGATAC...AATCGGGGATTGGTGAGCCAGCTGCTGGAATGGGAGAAGACTATCCTTGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS GCA 90 bp AACGAAGACCTTCCCTGGCACGATTTCAATGGGGTATGGCTGAAATaGATCCAGTTCCTTTGCCATCACCATCAGAGTCTGAATCATCAT +
Preference number: 5 (lower is better)
Translates to: NEDLPWHDFNGVWLK*IQFLCHHHQSLNHH
Trigger: ATGATGATTCAGACTCTGATGGTGATGGCAAAGGAACTGGATGCATTTCAGCCATACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp ATCCATGGAGACATTGACATGGGCTTTGATTTTCAAGTCCTTCTGAATCTTGGGTCCAGGGTGCTGCTGTaGTTATCATACACCACGCAG +
Preference number: 5 (lower is better)
Translates to: IHGDIDMGFDFQVLLNLGSRVLL*LSYTTQ
Trigger: CTGCGTGGTGTATGATAACAACAGCAGCACCCTGGA...CCCAAGATTCAGAAGGACTTGAAAATCAAAGCCCATGTCAATGTCTCCATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp GTTTGTGATGGAATCTCCAAGGATAGTCTTCTCCCATTCCAGCAGCTGGCTCACCGATTTGGACACATGTaGTTTTTGCACTTCTTGACA +
Preference number: 5 (lower is better)
Translates to: VCDGISKDSLLPFQQLAHRFGHM*FLHFLT
Trigger: TGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCG...GTGAGCCAGCTGCTGGAATGGGAGAAGACTATCCTTGGAGATTCCATCACAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp GGAGACATTGACATGGGCTTTGATTTTCAAGTCCTTCTGAATCTTGGGGTCACATCACCAATCCCCGATTaGGACACATGTTGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: GDIDMGFDFQVLLNLGVTSPIPD*DTCCFC
Trigger: GCAAAAACAACATGTGTCCAAATCGGGGATTGGTGA...TGTGACCCCAAGATTCAGAAGGACTTGAAAATCAAAGCCCATGTCAATGTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp CTGGCTCACCAATCCCCGATTTGGACACATGTTGTTTTTGCACTTCTTGACATATCACCAATCCCCGATTaGGACACATGTTGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: LAHQSPIWTHVVFALLDISPIPD*DTCCFC
Trigger: GCAAAAACAACATGTGTCCAAATCGGGGATTGGTGA...TATGTCAAGAAGTGCAAAAACAACATGTGTCCAAATCGGGGATTGGTGAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS CCA 90 bp TGGAACGGACATCCAATAAACAGAGATAGTTGGGGTCTGTTAATCTaGAGAGTTTTGTGGCCTGATTCAGGATGTTGTAAAGCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: WNGHPINRDSWGLLI*RVLWPDSGCCKALL
Trigger: CAACAGAGCTTTACAACATCCTGAATCAGGCCACAAAACTCTCCAGATTAACAGACCCCAACTATCTCTGTTTATTGGATGTCCGTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
ENST00000474328.5
CDS-3UTR CAA 90 bp TGTATCCATGGAGACATTGACATGGGCTTTGATTTTCAAGTCCTTCTGAATCTTCTTGGGGTCACAGGCTaGACTGAAATTGCCAACGAA +
Preference number: 5 (lower is better)
Translates to: CIHGDIDMGFDFQVLLNLLGVTG*TEIANE
Trigger: TTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAAG...AAGATTCAGAAGGACTTGAAAATCAAAGCCCATGTCAATGTCTCCATGGATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS-3UTR CAA 90 bp GAAACAGACAATCTGAATAGGCCTACATATATTAAAGAAATTGAGTGGTGGCAGCTTGGGGTCACAGGCTaGACTGAAATTGCCAACGAA +
Preference number: 5 (lower is better)
Translates to: ETDNLNRPTYIKEIEWWQLGVTG*TEIANE
Trigger: TTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAAG...CTGCCACCACTCAATTTCTTTAATATATGTAGGCCTATTCAGATTGTCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CAA 90 bp AAGACCATTCGATGGGGGAAAAGGACAGTCATTTCAACAAATGGTGCTAGGAAAGTATCCATGGAGACATaGACATGGGCTTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: KTIRWGKRTVISTNGARKVSMET*TWALIF
Trigger: GAAAATCAAAGCCCATGTCAATGTCTCCATGGATAC...TTTCCTAGCACCATTTGTTGAAATGACTGTCCTTTTCCCCCATCGAATGGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CAA 90 bp TCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAATTGAAACGGATGTGCAGAAGCTaGTCAGCATCGCCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: STNGARKTRYAMQRMKLKRMCRS*SASPAK
Trigger: TTTTGCAGGCGATGCTGACAAGCTTCTGCACATCCG...TTTCAATTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS CCA 90 bp CCAATAAACAGAGATAGTTGGGGTCTGTTAATCTGGAGAGTTTTGTaGCCTGATTCAGGATGTTGTAAAGCTCTGTTGGTTCACATAAAA +
Preference number: 5 (lower is better)
Translates to: PINRDSWGLLIWRVL*PDSGCCKALLVHIK
Trigger: TTTTATGTGAACCAACAGAGCTTTACAACATCCTGAATCAGGCCACAAAACTCTCCAGATTAACAGACCCCAACTATCTCTGTTTATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
ENST00000474328.5
CDS CCA 90 bp AGATATTCATTATTTTTCTTCTTCACTCGAAGGGCAGTGATCACATaGCTTTCGTCATACTCCCATTTGGAACGGACATCCAATAAACAG +
Preference number: 5 (lower is better)
Translates to: RYSLFFFFTRRAVIT*LSSYSHLERTSNKQ
Trigger: CTGTTTATTGGATGTCCGTTCCAAATGGGAGTATGACGAAAGCCATGTGATCACTGCCCTTCGAGTGAAGAAGAAAAATAATGAATATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
CDS-3UTR CAA 90 bp AATCGATACACCGCTAGCCAGGCTAACTTAAACAGAAGACACAAATTACTAATAGTGAAAGAGAAGACATaGCTACAGATCCCACAGACA +
Preference number: 5 (lower is better)
Translates to: NRYTASQANLNRRHKLLIVKEKT*LQIPQT
Trigger: TGTCTGTGGGATCTGTAGCAATGTCTTCTCTTTCAC...TATTAGTAATTTGTGTCTTCTGTTTAAGTTAGCCTGGCTAGCGGTGTATCGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CAA 90 bp GTCATTTCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAATCGTCATACTCCCATTaGGAACGGACATCCAATAAA +
Preference number: 5 (lower is better)
Translates to: VISTNGARKTRYAMQRMKSSYSH*ERTSNK
Trigger: TTTATTGGATGTCCGTTCCAAATGGGAGTATGACGA...TTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGAAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS-3UTR CAA 90 bp GTCATTTCAACAAATGGTGCTAGGAAAACTAGATACGCCATGCAAAGAATGAAACATATATTAAAGAAATaGAGTGGTGGCAGATGCCTG +
Preference number: 5 (lower is better)
Translates to: VISTNGARKTRYAMQRMKHILKK*SGGRCL
Trigger: CAGGCATCTGCCACCACTCAATTTCTTTAATATATG...TTTCATTCTTTGCATGGCGTATCTAGTTTTCCTAGCACCATTTGTTGAAATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451157.1
CDS GCA 72 bp GGGGCTCGGGTCTGGGACGCGCTCCACCTCCCCGGCTaGGCGACTATGGCCAGGCTCCCTGTCGGAGCCTCT +
Preference number: 6 (lower is better)
Translates to: GARVWDALHLPG*ATMARLPVGAS
Trigger: AGAGGCTCCGACAGGGAGCCTGGCCATAGTCGCGCAGCCGGGGAGGTGGAGCGCGTCCCAGACCCGAGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS TCA 72 bp CCTCTGGCCTCCAAGGGCAGAAGGAATGGGTTTGGCTaGGGTCGGGGGCTCGGGTCTGGGACGCGCTCCACC +
Preference number: 6 (lower is better)
Translates to: PLASKGRRNGFG*GRGLGSGTRST
Trigger: GGTGGAGCGCGTCCCAGACCCGAGCCCCCGACCTCAGCCAAACCCATTCCTTCTGCCCTTGGAGGCCAGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000360591.7
CDS CCA 72 bp CTAAAGCCCGTCCTCTTCCACCTCTTGGGTGCAGACTaGCCCTCCCACTCCGACCGCAGGTCCCCCACCGGC +
Preference number: 6 (lower is better)
Translates to: LKPVLFHLLGAD*PSHSDRRSPTG
Trigger: GCCGGTGGGGGACCTGCGGTCGGAGTGGGAGGGCCAGTCTGCACCCAAGAGGTGGAAGAGGACGGGCTTTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
ENST00000474328.5
CDS CAA 72 bp GGCGCTTCCAGCCTAAAGCCCGTCCTCTTCCACCTCTaGGGTGCAGACTGGCCCTCCCACTCCGACCGCAGG +
Preference number: 6 (lower is better)
Translates to: GASSLKPVLFHL*GADWPSHSDRR
Trigger: CCTGCGGTCGGAGTGGGAGGGCCAGTCTGCACCCAAGAGGTGGAAGAGGACGGGCTTTAGGCTGGAAGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
ENST00000474328.5
CDS GCA 72 bp TTCCAGCCTAAAGCCCGTCCTCTTCCACCTCTTGGGTaGAGACTGGCCCTCCCACTCCGACCGCAGGTCCCC +
Preference number: 6 (lower is better)
Translates to: FQPKARPLPPLG*RLALPLRPQVP
Trigger: GGGGACCTGCGGTCGGAGTGGGAGGGCCAGTCTGCACCCAAGAGGTGGAAGAGGACGGGCTTTAGGCTGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
ENST00000474328.5
CDS CCA 72 bp ACGCTAGAACCCAGCCAAACACCGGGGTTGCCAGGATaGTCCCACAGCTTTCCTTTCCGACTCCCGGAAGTG +
Preference number: 6 (lower is better)
Translates to: TLEPSQTPGLPG*SHSFPFRLPEV
Trigger: CACTTCCGGGAGTCGGAAAGGAAAGCTGTGGGACCATCCTGGCAACCCCGGTGTTTGGCTGGGTTCTAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248600.5
ENST00000360591.7
ENST00000460184.2
CDS TCA 72 bp GATGATCTTCTGGGTCCGGAGAAAGTGGTACGTGCCTaGGAAGCGCTCATAGCCCCCTTTCAGGATGTAGAC +
Preference number: 6 (lower is better)
Translates to: DDLLGPEKVVRA*EALIAPFQDVD
Trigger: GTCTACATCCTGAAAGGGGGCTATGAGCGCTTCTCAGGCACGTACCACTTTCTCCGGACCCAGAAGATCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
ENST00000451157.1
ENST00000454618.5
ENST00000460184.2
CDS GCA 72 bp GGTGAGGCGGGTCAGGATCCTGCCATACTCAATGGCTaGTTGAGGCACAAGATCTTTGCCATCACCATCAGA +
Preference number: 6 (lower is better)
Translates to: GEAGQDPAILNG*LRHKIFAITIR
Trigger: TCTGATGGTGATGGCAAAGATCTTGTGCCTCAAGCAGCCATTGAGTATGGCAGGATCCTGACCCGCCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
ENST00000451157.1
ENST00000454618.5
ENST00000460184.2
CDS TCA 72 bp AAGACCTTCCCTGGCACGATTTCAATGGGGTATGGCTaGAATGCATCCAGTTCCTTCTTCACTCGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: KTFPGTISMGYG*NASSSFFTRRA
Trigger: TGCCCTTCGAGTGAAGAAGGAACTGGATGCATTTCAGCCATACCCCATTGAAATCGTGCCAGGGAAGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340062.9
ENST00000360591.7
ENST00000474328.5
CDS CCA 72 bp AACGAAGACCTTCCCTGGCACGATTTCAATGGGGTATaGCTGAAATGCATCCAGTTCCTGAGGCATCCAGAT +
Preference number: 6 (lower is better)
Translates to: NEDLPWHDFNGV*LKCIQFLRHPD
Trigger: ATCTGGATGCCTCAGGAACTGGATGCATTTCAGCCATACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
ENST00000451157.1
ENST00000454618.5
CDS CCA 72 bp AATTGCCAACGAAGACCTTCCCTGGCACGATTTCAATaGGGTATGGCTGAAATGCATCCAGTTCCTGAGGCA +
Preference number: 6 (lower is better)
Translates to: NCQRRPSLARFQ*GMAEMHPVPEA
Trigger: TGCCTCAGGAACTGGATGCATTTCAGCCATACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTTGGCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
ENST00000451157.1
ENST00000454618.5
CDS CCA 72 bp TCCAGTTCCTTCTTCACTCGAAGGGCAGTGATCACATaGCTTTCGTCATACTCCCATTTGGAACGGACATCC +
Preference number: 6 (lower is better)
Translates to: SSSFFTRRAVIT*LSSYSHLERTS
Trigger: GGATGTCCGTTCCAAATGGGAGTATGACGAAAGCCATGTGATCACTGCCCTTCGAGTGAAGAAGGAACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340062.9
ENST00000360591.7
ENST00000474328.5
CDS TCA 72 bp TCAAGTCCTTCTGAATCTTGGGGTCACAGGCTTGACTaGAATTGCCAACGAAGACCTTCCCTGGCACGATTT +
Preference number: 6 (lower is better)
Translates to: SSPSESWGHRLD*NCQRRPSLARF
Trigger: AAATCGTGCCAGGGAAGGTCTTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAAGATTCAGAAGGACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
ENST00000451157.1
ENST00000454618.5
ENST00000474328.5
CDS TCA 72 bp AAGACCTTCCCTGGCACGATTTCAATGGGGTATGGCTaGAATGCATCCAGTTCCTTTGCCATCACCATCAGA +
Preference number: 6 (lower is better)
Translates to: KTFPGTISMGYG*NASSSFAITIR
Trigger: TCTGATGGTGATGGCAAAGGAACTGGATGCATTTCAGCCATACCCCATTGAAATCGTGCCAGGGAAGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS CCA 72 bp ACAGGCTTGACTGAAATTGCCAACGAAGACCTTCCCTaGCACGATTTCAATGGGGTATGGCTGAAATGCATC +
Preference number: 6 (lower is better)
Translates to: TGLTEIANEDLP*HDFNGVWLKCI
Trigger: GATGCATTTCAGCCATACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTTGGCAATTTCAGTCAAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
ENST00000451157.1
ENST00000454618.5
ENST00000474328.5
CDS CCA 72 bp AACGAAGACCTTCCCTGGCACGATTTCAATGGGGTATaGCTGAAATGCATCCAGTTCCTTCTTCACTCGAAG +
Preference number: 6 (lower is better)
Translates to: NEDLPWHDFNGV*LKCIQFLLHSK
Trigger: CTTCGAGTGAAGAAGGAACTGGATGCATTTCAGCCATACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340062.9
ENST00000360591.7
ENST00000474328.5
CDS CCA 72 bp AACGAAGACCTTCCCTGGCACGATTTCAATGGGGTATaGCTGAAATGCATCCAGTTCCTTTGCCATCACCAT +
Preference number: 6 (lower is better)
Translates to: NEDLPWHDFNGV*LKCIQFLCHHH
Trigger: ATGGTGATGGCAAAGGAACTGGATGCATTTCAGCCATACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS CCA 72 bp AATTGCCAACGAAGACCTTCCCTGGCACGATTTCAATaGGGTATGGCTGAAATGCATCCAGTTCCTTTGCCA +
Preference number: 6 (lower is better)
Translates to: NCQRRPSLARFQ*GMAEMHPVPLP
Trigger: TGGCAAAGGAACTGGATGCATTTCAGCCATACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTTGGCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430497.5
ENST00000438695.5
CDS CCA 72 bp AATTGCCAACGAAGACCTTCCCTGGCACGATTTCAATaGGGTATGGCTGAAATGCATCCAGTTCCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: NCQRRPSLARFQ*GMAEMHPVPSS
Trigger: TGAAGAAGGAACTGGATGCATTTCAGCCATACCCCATTGAAATCGTGCCAGGGAAGGTCTTCGTTGGCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340062.9
ENST00000360591.7
ENST00000474328.5
CDS CAA 90 bp ATGGGCTTTGATTTTCAAGTCCTTCTGAATCTTGGGGTCACAGGCTaGACTGAAATTGCCAACGAAGACCTTCCCTGGCACGATTTCAAT +
Preference number: 6 (lower is better)
Translates to: MGFDFQVLLNLGVTG*TEIANEDLPWHDFN
Trigger: ATTGAAATCGTGCCAGGGAAGGTCTTCGTTGGCAATTTCAGTCAAGCCTGTGACCCCAAGATTCAGAAGGACTTGAAAATCAAAGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
ENST00000451157.1
ENST00000454618.5
ENST00000474328.5
CDS CCA 72 bp CCCATTTGGAACGGACATCCAATAAACAGAGATAGTTaGGGTCTGTTAATCTGGAGAGTTTTGTGGCCTGAT +
Preference number: 6 (lower is better)
Translates to: PIWNGHPINRDS*GLLIWRVLWPD
Trigger: ATCAGGCCACAAAACTCTCCAGATTAACAGACCCCAACTATCTCTGTTTATTGGATGTCCGTTCCAAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
ENST00000474328.5
CDS CCA 72 bp TTATTTTTCTTCTTCACTCGAAGGGCAGTGATCACATaGCTTTCGTCATACTCCCATTTGGAACGGACATCC +
Preference number: 6 (lower is better)
Translates to: LFFFFTRRAVIT*LSSYSHLERTS
Trigger: GGATGTCCGTTCCAAATGGGAGTATGACGAAAGCCATGTGATCACTGCCCTTCGAGTGAAGAAGAAAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
CDS CAA 72 bp TCATCATCTTTTAAGAGTATCTCCAGGGTGCTGCTGTaGTTATCATACACCACGCAGTACTTCACACACTCC +
Preference number: 6 (lower is better)
Translates to: SSSFKSISRVLL*LSYTTQYFTHS
Trigger: GGAGTGTGTGAAGTACTGCGTGGTGTATGATAACAACAGCAGCACCCTGGAGATACTCTTAAAAGATGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
ENST00000451157.1
ENST00000454618.5
ENST00000460184.2
CDS GCA 72 bp CATCATCATCATCTTTTAAGAGTATCTCCAGGGTGCTaGTGTTGTTATCATACACCACGCAGTACTTCACAC +
Preference number: 6 (lower is better)
Translates to: HHHHLLRVSPGC*CCYHTPRSTSH
Trigger: GTGTGAAGTACTGCGTGGTGTATGATAACAACAGCAGCACCCTGGAGATACTCTTAAAAGATGATGATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000430497.5
ENST00000431581.5
ENST00000438695.5
ENST00000451157.1
ENST00000454618.5
ENST00000460184.2
CDS CCA 72 bp AGAGATAGTTGGGGTCTGTTAATCTGGAGAGTTTTGTaGCCTGATTCAGGATGTTGTAAAGCTCTGTTGGTT +
Preference number: 6 (lower is better)
Translates to: RDSWGLLIWRVL*PDSGCCKALLV
Trigger: AACCAACAGAGCTTTACAACATCCTGAATCAGGCCACAAAACTCTCCAGATTAACAGACCCCAACTATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
ENST00000474328.5
CDS CAA 72 bp AACAGAGATAGTTGGGGTCTGTTAATCTGGAGAGTTTaGTGGCCTGATTCAGGATGTTGTAAAGCTCTGTTG +
Preference number: 6 (lower is better)
Translates to: NRDSWGLLIWRV*WPDSGCCKALL
Trigger: CAACAGAGCTTTACAACATCCTGAATCAGGCCACAAAACTCTCCAGATTAACAGACCCCAACTATCTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
ENST00000474328.5
CDS CAA 90 bp CATCCAATAAACAGAGATAGTTGGGGTCTGTTAATCTGGAGAGTTTaGTGGCCTGATTCAGGATGTTGTAAAGCTCTGTTGGTTCACATA +
Preference number: 6 (lower is better)
Translates to: HPINRDSWGLLIWRV*WPDSGCCKALLVHI
Trigger: TATGTGAACCAACAGAGCTTTACAACATCCTGAATCAGGCCACAAAACTCTCCAGATTAACAGACCCCAACTATCTCTGTTTATTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
ENST00000474328.5
CDS TCA 72 bp GATATTCATTATTTTTCTTCTTCACTCGAAGGGCAGTaGTCACATGGCTTTCGTCATACTCCCATTTGGAAC +
Preference number: 6 (lower is better)
Translates to: DIHYFSSSLEGQ*SHGFRHTPIWN
Trigger: GTTCCAAATGGGAGTATGACGAAAGCCATGTGATCACTGCCCTTCGAGTGAAGAAGAAAAATAATGAATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000248600.5
ENST00000359697.8
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
CDS CCA 72 bp CATCCAATAAACAGAGATAGTTGGGGTCTGTTAATCTaGAGAGTTTTGTGGCCTGATTCAGGATGTTGTAAA +
Preference number: 6 (lower is better)
Translates to: HPINRDSWGLLI*RVLWPDSGCCK
Trigger: TTTACAACATCCTGAATCAGGCCACAAAACTCTCCAGATTAACAGACCCCAACTATCTCTGTTTATTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000248600.5
ENST00000340062.9
ENST00000359697.8
ENST00000360591.7
ENST00000431581.5
ENST00000451157.1
ENST00000460184.2
ENST00000474328.5