RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STXBP6 (Homo sapiens)

Ensembl gene IDs: ENSG00000168952

Ensembl transcript IDs: ENST00000323944.9, ENST00000396700.5, ENST00000419632.6, ENST00000546511.5, ENST00000548182.1, ENST00000548369.1, ENST00000550887.5

Found 667 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGCCTAATCGCTCTCCACGCTCATTCAAGGCCTGGCTTGCCTTCTaGACTGCGCTGGTCACGCTGTCAGCAGCTGAATGGAGGATGCTG +
Preference number: 1 (lower is better)
Translates to: RPNRSPRSFKAWLAF*TALVTLSAAEWRML
Trigger: CAGCATCCTCCATTCAGCTGCTGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 90 bp GCTCTCCACGCTCATTCAAGGCCTGGCTTGCCTTCTGCACTGCGCTaGTCACGCTGTCAGCAGCTGAATGGAGGATGCTGTTTCCTCCCA +
Preference number: 1 (lower is better)
Translates to: ALHAHSRPGLPSALR*SRCQQLNGGCCFLP
Trigger: TGGGAGGAAACAGCATCCTCCATTCAGCTGCTGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 90 bp TTCTCCTCTGCTCGGCCTAATCGCTCTCCACGCTCATTCAAGGCCTaGCTTGCCTTCTGCACTGCGCTGGTCACGCTGTCAGCAGCTGAA +
Preference number: 1 (lower is better)
Translates to: FSSARPNRSPRSFKA*LAFCTALVTLSAAE
Trigger: TTCAGCTGCTGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCGAGCAGAGGAGAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR TCA 90 bp CAGAGCCATGCTTGTCTAGGGGGTAGAATGCTTGGGTTCCATCTCTaGACTCTCCCCTCACCAGCAGGCCTGGCTGTGGCTTGTCCAGTA +
Preference number: 1 (lower is better)
Translates to: QSHACLGGRMLGFHL*TLPSPAGLAVACPV
Trigger: TACTGGACAAGCCACAGCCAGGCCTGCTGGTGAGGGGAGAGTTCAGAGATGGAACCCAAGCATTCTACCCCCTAGACAAGCATGGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 90 bp GGCACCCTTATTCAACTGGGAGCTCTAGGAGCTGCCACCTGGCATTaGCATTTTCAGCTCAGGACTCTGCCATGTGTTCTGGCCCCCACT +
Preference number: 1 (lower is better)
Translates to: GTLIQLGALGAATWH*HFQLRTLPCVLAPT
Trigger: AGTGGGGGCCAGAACACATGGCAGAGTCCTGAGCTGAAAATGGCAATGCCAGGTGGCAGCTCCTAGAGCTCCCAGTTGAATAAGGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 90 bp CCAGCTGGGGTTCGGCACCCTTATTCAACTGGGAGCTCTAGGAGCTaGCACCTGGCATTGCCATTTTCAGCTCAGGACTCTGCCATGTGT +
Preference number: 1 (lower is better)
Translates to: PAGVRHPYSTGSSRS*HLALPFSAQDSAMC
Trigger: ACACATGGCAGAGTCCTGAGCTGAAAATGGCAATGCCAGGTGGCAGCTCCTAGAGCTCCCAGTTGAATAAGGGTGCCGAACCCCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 90 bp GGCTTCCTGTCCGTGAGGTACCTCTGGCAGGTATGGTGGAGGATCTaGAAGAAGGTGCATTTTTCTGACGCTGTGCTGGCTACCCACTGG +
Preference number: 1 (lower is better)
Translates to: GFLSVRYLWQVWWRI*KKVHFSDAVLATHW
Trigger: CCAGTGGGTAGCCAGCACAGCGTCAGAAAAATGCACCTTCTTCCAGATCCTCCACCATACCTGCCAGAGGTACCTCACGGACAGGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 90 bp GGGTTCGGCACCCTTATTCAACTGGGAGCTCTAGGAGCTGCCACCTaGCATTGCCATTTTCAGCTCAGGACTCTGCCATGTGTTCTGGCC +
Preference number: 1 (lower is better)
Translates to: GFGTLIQLGALGAAT*HCHFQLRTLPCVLA
Trigger: GGCCAGAACACATGGCAGAGTCCTGAGCTGAAAATGGCAATGCCAGGTGGCAGCTCCTAGAGCTCCCAGTTGAATAAGGGTGCCGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 90 bp GAGCTCAAGAAAGGACCACATTTCCTCAAACCAGGCTCACCAGAGTaGAGGTGGGGGAGTCAGTCTAGGAAGGCAGGGCGGAAGGATCAT +
Preference number: 1 (lower is better)
Translates to: ELKKGPHFLKPGSPE*RWGSQSRKAGRKDH
Trigger: ATGATCCTTCCGCCCTGCCTTCCTAGACTGACTCCCCCACCTCCACTCTGGTGAGCCTGGTTTGAGGAAATGTGGTCCTTTCTTGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 90 bp GAGGTAAAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTTGTaGGGAGGCCTAGGTAGGACTTTGACACTGAGAGGTCAAAGGTAT +
Preference number: 1 (lower is better)
Translates to: EVKEGQGLLLRPSLL*GGLGRTLTLRGQRY
Trigger: ATACCTTTGACCTCTCAGTGTCAAAGTCCTACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTTTACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR CCA 90 bp TTTCTTCCCCGAAAGGTCACCTTGTGCGCAGTTTCTGCAAACTGCTaGGCGCTGTTCTTCAGGTCTTCTGTCTTCTCCTCTGCTCGGCCT +
Preference number: 1 (lower is better)
Translates to: FLPRKVTLCAVSANC*ALFFRSSVFSSARP
Trigger: AGGCCGAGCAGAGGAGAAGACAGAAGACCTGAAGAACAGCGCCCAGCAGTTTGCAGAAACTGCGCACAAGGTGACCTTTCGGGGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR TCA 90 bp ACTCTCCCCTCACCAGCAGGCCTGGCTGTGGCTTGTCCAGTAAAATaGCAGCTTCATGGTCAGCCTATGCTAGCAGGTCCAAATCAAGAG +
Preference number: 1 (lower is better)
Translates to: TLPSPAGLAVACPVK*QLHGQPMLAGPNQE
Trigger: CTCTTGATTTGGACCTGCTAGCATAGGCTGACCATGAAGCTGTCATTTTACTGGACAAGCCACAGCCAGGCCTGCTGGTGAGGGGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 90 bp TCCAATCCAGTGTTTGTACAGCCCCCTCTGGGAGGGACGCCTACGTaGACGACATCCAGGTATTGTCTATGCCACCTTAGGAAGAGCAAT +
Preference number: 1 (lower is better)
Translates to: SNPVFVQPPLGGTPT*TTSRYCLCHLRKSN
Trigger: ATTGCTCTTCCTAAGGTGGCATAGACAATACCTGGATGTCGTCCACGTAGGCGTCCCTCCCAGAGGGGGCTGTACAAACACTGGATTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 90 bp GGCGGGGCCGTCAAAGCATTGCGTCTGCTGCAACATTGTGCTTTTTaGCAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCAC +
Preference number: 1 (lower is better)
Translates to: GGAVKALRLLQHCAF*QGKVSRSVSAIVVH
Trigger: GTGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTGCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGACGGCCCCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 90 bp AGTATCAGGGAAACAGGGCTACCAGGGCCAAGAATTCAGGCCATCTaGTTAGGTTATCCAATCCAGTGTTTGTACAGCCCCCTCTGGGAG +
Preference number: 1 (lower is better)
Translates to: SIRETGLPGPRIQAI*LGYPIQCLYSPLWE
Trigger: CTCCCAGAGGGGGCTGTACAAACACTGGATTGGATAACCTAACCAGATGGCCTGAATTCTTGGCCCTGGTAGCCCTGTTTCCCTGATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 90 bp TCTGCCGAATCCCCATTAGGATCGATACCATTAACCTGGCGAAGCTaGTCGAGCATCCACTGTGATCTCCGAACAAATGATGTGGAGCCT +
Preference number: 1 (lower is better)
Translates to: SAESPLGSIPLTWRS*SSIHCDLRTNDVEP
Trigger: AGGCTCCACATCATTTGTTCGGAGATCACAGTGGATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGATCCTAATGGGGATTCGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 90 bp CCAATTCTCCTTGAAGGAACTCGAAATGGGCCCCACGGGCAACAGTaGAGTAAGACCCTGTCACGACAGAGAATGAATGAGATGACAAGA +
Preference number: 1 (lower is better)
Translates to: PILLEGTRNGPHGQQ*SKTLSRQRMNEMTR
Trigger: TCTTGTCATCTCATTCATTCTCTGTCGTGACAGGGTCTTACTGCACTGTTGCCCGTGGGGCCCATTTCGAGTTCCTTCAAGGAGAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR TCA 90 bp TCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTAACTTTGCATaGAGCCCGGAGCTCAAGAAAGGACCACATTTCCTCAAACCAGGC +
Preference number: 1 (lower is better)
Translates to: SVSAIVVHFPEVNFA*SPELKKGPHFLKPG
Trigger: GCCTGGTTTGAGGAAATGTGGTCCTTTCTTGAGCTCCGGGCTTCATGCAAAGTTAACCTCAGGAAAGTGCACCACAATCGCAGAAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 90 bp GATTGGCAGTTAATAAACTCTGGCTTCCTGTCCGTGAGGTACCTCTaGCAGGTATGGTGGAGGATCTGGAAGAAGGTGCATTTTTCTGAC +
Preference number: 1 (lower is better)
Translates to: DWQLINSGFLSVRYL*QVWWRIWKKVHFSD
Trigger: GTCAGAAAAATGCACCTTCTTCCAGATCCTCCACCATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAGAGTTTATTAACTGCCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 90 bp CAAGTTAGAAGGCCAAGTTATTTTCTACTGGACTCTACAAAGGTGTaGCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTCAACTGGGA +
Preference number: 1 (lower is better)
Translates to: QVRRPSYFLLDSTKV*QTLQLGFGTLIQLG
Trigger: TCCCAGTTGAATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCCAGTAGAAAATAACTTGGCCTTCTAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 90 bp GATGCTGTTTCCTCCCATAATTTTGGATTGGCAGTTAATAAACTCTaGCTTCCTGTCCGTGAGGTACCTCTGGCAGGTATGGTGGAGGAT +
Preference number: 1 (lower is better)
Translates to: DAVSSHNFGLAVNKL*LPVREVPLAGMVED
Trigger: ATCCTCCACCATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAGAGTTTATTAACTGCCAATCCAAAATTATGGGAGGAAACAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 90 bp CTGGTCCCTGGGAAAATAGCCACACCTTATCTAAAGAGGTCAATCTaGTTGTTAGGAATACTGCCAGTGCCAGTGATTCATAGGCACACA +
Preference number: 1 (lower is better)
Translates to: LVPGKIATPYLKRSI*LLGILPVPVIHRHT
Trigger: TGTGTGCCTATGAATCACTGGCACTGGCAGTATTCCTAACAAGCAGATTGACCTCTTTAGATAAGGTGTGGCTATTTTCCCAGGGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 90 bp AAATCAAACTCTGCCGAATCCCCATTAGGATCGATACCATTAACCTaGCGAAGCTGCTCGAGCATCCACTGTGATCTCCGAACAAATGAT +
Preference number: 1 (lower is better)
Translates to: KSNSAESPLGSIPLT*RSCSSIHCDLRTND
Trigger: ATCATTTGTTCGGAGATCACAGTGGATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGATCCTAATGGGGATTCGGCAGAGTTTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 90 bp TCAGCTACTTTGGAATCAGCTTCCCAAACATTGTTGTTAGAGAGTTaGCAACCACTTCTGTTCTTGAATTTGGCGGACTGTCAGGGGGTT +
Preference number: 1 (lower is better)
Translates to: SATLESASQTLLLES*QPLLFLNLADCQGV
Trigger: AACCCCCTGACAGTCCGCCAAATTCAAGAACAGAAGTGGTTGCCAACTCTCTAACAACAATGTTTGGGAAGCTGATTCCAAAGTAGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTCTGAACTaGGATCTGCAAACAAAATCTATTTGGAGTGATATTTGGGGCTTT +
Preference number: 1 (lower is better)
Translates to: VCVCVCVCVCVCILN*DLQTKSIWSDIWGF
Trigger: AAAGCCCCAAATATCACTCCAAATAGATTTTGTTTGCAGATCTCAGTTCAGAATGCACACACACACACACACACACACACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR TCA 90 bp TCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTCTaGACTGAGATCTGCAAACAAAATCTATTTGGAGTGATATTTGGG +
Preference number: 1 (lower is better)
Translates to: SLCVCVCVCVCVCAF*TEICKQNLFGVIFG
Trigger: CCCAAATATCACTCCAAATAGATTTTGTTTGCAGATCTCAGTTCAGAATGCACACACACACACACACACACACACACACACACACAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR GCA 90 bp GACAGCGCTATATTCAAACACAAGATGTTAACTACTATTCCATATTaGTTTCCCAATTGCCTCGCAAACTTGGCCACAGTATCAGGGAAA +
Preference number: 1 (lower is better)
Translates to: DSAIFKHKMLTTIPY*FPNCLANLATVSGK
Trigger: TTTCCCTGATACTGTGGCCAAGTTTGCGAGGCAATTGGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATATAGCGCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 90 bp TCCCAAATCATGACAGTTATTTTGTCTAAGACCGTATTAATACTTTaGACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTTCACAT +
Preference number: 1 (lower is better)
Translates to: SQIMTVILSKTVLIL*TAAPSTRGQQRTSH
Trigger: ATGTGAAGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGTCTTAGACAAAATAACTGTCATGATTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR CCA 90 bp TTTATCAAGAGTAACTATTGTAATTCTACCAGGGAAGAAGAATCTTaGGTTTCACAGTATGCTTATGACCTCATCCTCAGCTACTTTGGA +
Preference number: 1 (lower is better)
Translates to: FIKSNYCNSTREEES*VSQYAYDLILSYFG
Trigger: TCCAAAGTAGCTGAGGATGAGGTCATAAGCATACTGTGAAACCCAAGATTCTTCTTCCCTGGTAGAATTACAATAGTTACTCTTGATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR CAA 90 bp CCTCTGCTCGGCCTAATCGCTCTCCACGCTCATTCAAGGCCTGGCTaGCCTTCTGCACTGCGCTGGTCACGCTGTCAGCAGCTGAATGGA +
Preference number: 2 (lower is better)
Translates to: PLLGLIALHAHSRPG*PSALRWSRCQQLNG
Trigger: TCCATTCAGCTGCTGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCGAGCAGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 90 bp CGGCACCCTTATTCAACTGGGAGCTCTAGGAGCTGCCACCTGGCATaGCCATTTTCAGCTCAGGACTCTGCCATGTGTTCTGGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: RHPYSTGSSRSCHLA*PFSAQDSAMCSGPH
Trigger: GTGGGGGCCAGAACACATGGCAGAGTCCTGAGCTGAAAATGGCAATGCCAGGTGGCAGCTCCTAGAGCTCCCAGTTGAATAAGGGTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 90 bp TGGGAGGTAAAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTaGTGGGGAGGCCTAGGTAGGACTTTGACACTGAGAGGTCAAAGG +
Preference number: 2 (lower is better)
Translates to: WEVKEGQGLLLRPSL*WGGLGRTLTLRGQR
Trigger: CCTTTGACCTCTCAGTGTCAAAGTCCTACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTTTACCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR CCA 90 bp ATCCAGTGTTTGTACAGCCCCCTCTGGGAGGGACGCCTACGTGGACGACATCCACTGTCAGCAGCTGAATaGAGGATGCTGTTTCCTCCC +
Preference number: 2 (lower is better)
Translates to: IQCLYSPLWEGRLRGRHPLSAAE*RMLFPP
Trigger: GGGAGGAAACAGCATCCTCCATTCAGCTGCTGACAG...TGGATGTCGTCCACGTAGGCGTCCCTCCCAGAGGGGGCTGTACAAACACTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 90 bp GGGCCAAGAATTCAGGCCATCTGGTTAGGTTATCCAATCCAGTGTTaGTACAGCCCCCTCTGGGAGGGACGCCTACGTGGACGACATCCA +
Preference number: 2 (lower is better)
Translates to: GPRIQAIWLGYPIQC*YSPLWEGRLRGRHP
Trigger: TGGATGTCGTCCACGTAGGCGTCCCTCCCAGAGGGGGCTGTACAAACACTGGATTGGATAACCTAACCAGATGGCCTGAATTCTTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp AAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTTGTGGGGAGGCCTAGGTCACACATACACACAGTaGGAGGAGGCAAAAACCCAA +
Preference number: 2 (lower is better)
Translates to: KEGQGLLLRPSLLWGGLGHTYTQ*EEAKTQ
Trigger: TTGGGTTTTTGCCTCCTCCCACTGTGTGTATGTGTG...ACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR CCA 90 bp TCCTTGAAGGAACTCGAAATGGGCCCCACGGGCAACAGTGCAGTAAGACCCTGTTCCGTGAGGTACCTCTaGCAGGTATGGTGGAGGATC +
Preference number: 2 (lower is better)
Translates to: SLKELEMGPTGNSAVRPCSVRYL*QVWWRI
Trigger: GATCCTCCACCATACCTGCCAGAGGTACCTCACGGA...ACAGGGTCTTACTGCACTGTTGCCCGTGGGGCCCATTTCGAGTTCCTTCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 90 bp GTTCCATCTCTGAACTCTCCCCTCACCAGCAGGCCTGGCTGTGGCTaGTCCAGTAAAATGACAGCTTCATGGTCAGCCTATGCTAGCAGG +
Preference number: 2 (lower is better)
Translates to: VPSLNSPLTSRPGCG*SSKMTASWSAYASR
Trigger: CCTGCTAGCATAGGCTGACCATGAAGCTGTCATTTTACTGGACAAGCCACAGCCAGGCCTGCTGGTGAGGGGAGAGTTCAGAGATGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR TCA 90 bp AATGAGATGACAAGACAGCGCTGTGCAAAGGGGATGCAGGAAGAGAAGGCAGGACTGGCTTCCTGTCCGTaGGGTACCTCTGGCAGGTAT +
Preference number: 2 (lower is better)
Translates to: NEMTRQRCAKGMQEEKAGLASCP*GTSGRY
Trigger: ATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAG...TCCTGCCTTCTCTTCCTGCATCCCCTTTGCACAGCGCTGTCTTGTCATCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR TCA 90 bp GGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTCACTTGGGTTCCATCTCTaGACTCTCCCCTCACCAGCA +
Preference number: 2 (lower is better)
Translates to: GLYKGVPNSPAGVRHPYSLGFHL*TLPSPA
Trigger: TGCTGGTGAGGGGAGAGTTCAGAGATGGAACCCAAG...TGAATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR GCA 90 bp AAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTTGTGGGGAGGCCTAGGTCAGCTTAAAAATCAATaGGCTGCAGTGGTAGGCTTA +
Preference number: 2 (lower is better)
Translates to: KEGQGLLLRPSLLWGGLGQLKNQ*AAVVGL
Trigger: TAAGCCTACCACTGCAGCGCATTGATTTTTAAGCTG...ACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR GCA 90 bp CAGCTTCATGGTCAGCCTATGCTAGCAGGTCCAAATCAAGAGTCCTGGTCCCTGGCAGTTTCTGCAAACTaGTGGGCGCTGTTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: QLHGQPMLAGPNQESWSLAVSAN*WALFFR
Trigger: CCTGAAGAACAGCGCCCAGCAGTTTGCAGAAACTGC...CAGGGACCAGGACTCTTGATTTGGACCTGCTAGCATAGGCTGACCATGAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR GCA 90 bp GGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTCAGACAAGACAGCGCTGTaGAAAGGGGATGCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: GLYKGVPNSPAGVRHPYSDKTAL*KGDAGR
Trigger: TCTTCCTGCATCCCCTTTGCACAGCGCTGTCTTGTC...TGAATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp AAGGCAGGAGTCATCCACTTAGAGCTGGATCCCCAGCTGGACCTGAGCGTGAGCTCACCGCAACTCAGCTaGGAATATTCTTCTCATTGC +
Preference number: 2 (lower is better)
Translates to: KAGVIHLELDPQLDLSVSSPQLS*EYSSHC
Trigger: GCAATGAGAAGAATATTCCCAGCTGAGTTGCGGTGA...GCTCACGCTCAGGTCCAGCTGGGGATCCAGCTCTAAGTGGATGACTCCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 90 bp TGGCGGGGCCGTCAAAGCATTGCGTCTGCTGCAACATTGTGCTTTTaGGCAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCA +
Preference number: 2 (lower is better)
Translates to: WRGRQSIASAATLCF*ARESEQICFCDCGA
Trigger: TGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTGCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGACGGCCCCGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR TCA 90 bp ATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGATTCATAGGCACACATCCCAGCTCACCCCTCCCGAGTaGAAGCAGGTAACTGCTAGG +
Preference number: 2 (lower is better)
Translates to: ICLLGILPVPVIHRHTSQLTPPE*KQVTAR
Trigger: CCTAGCAGTTACCTGCTTTCACTCGGGAGGGGTGAG...CTGGGATGTGTGCCTATGAATCACTGGCACTGGCAGTATTCCTAACAAGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp CTGGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTTCGATACCATTAACCTaGCGAAGCTGCTCGAGCATC +
Preference number: 2 (lower is better)
Translates to: LDSTKVCQTLQLGFGTLISIPLT*RSCSSI
Trigger: GATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGA...AATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp CTCTGGCTTCCTGTCCGTGAGGTACCTCTGGCAGGTATGGTGGAGGATCTGGAAGTGCTGGCTACCCACTaGTCAAAAGCATTTTCAAAC +
Preference number: 2 (lower is better)
Translates to: LWLPVREVPLAGMVEDLEVLATH*SKAFSN
Trigger: GTTTGAAAATGCTTTTGACCAGTGGGTAGCCAGCAC...TTCCAGATCCTCCACCATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp TTCCCTGTCCCTGTGTTGAGGATCCTCAATCACCAGTATCAATTCTCCAATCCCCGCTCATTCAAGGCCTaGCTTGCCTTCTGCACTGCG +
Preference number: 2 (lower is better)
Translates to: FPVPVLRILNHQYQFSNPRSFKA*LAFCTA
Trigger: CGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCG...GGGATTGGAGAATTGATACTGGTGATTGAGGATCCTCAACACAGGGACAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp CCCACTGGTCAAGCCAGAGACCCCTTTGCCTTTGGTGGCCGCATTAGTTTCTATGTTTCTGCAAACTGCTaGGCGCTGTTCTTCAGGTCT +
Preference number: 2 (lower is better)
Translates to: PTGQARDPFAFGGRISFYVSANC*ALFFRS
Trigger: AGACCTGAAGAACAGCGCCCAGCAGTTTGCAGAAAC...ATAGAAACTAATGCGGCCACCAAAGGCAAAGGGGTCTCTGGCTTGACCAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp TATGGCGGGGCCGTCAAAGCATTGCGTCTGCTGCAACATTGTGCTTTTTGGCAAATTGACTCTTGCACCTaGGTCACTGCAGGAGTCCTG +
Preference number: 2 (lower is better)
Translates to: YGGAVKALRLLQHCAFWQIDSCT*VTAGVL
Trigger: CAGGACTCCTGCAGTGACCCAGGTGCAAGAGTCAAT...TTGCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGACGGCCCCGCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 90 bp TTGCTGTTACGGCCCTCTCTGTTGTGGGGAGGCCTAGGTAGGACTTaGACACTGAGAGGTCAAAGGTATGAACGCAGCCTGGAAACTAAT +
Preference number: 2 (lower is better)
Translates to: LLLRPSLLWGGLGRT*TLRGQRYERSLETN
Trigger: ATTAGTTTCCAGGCTGCGTTCATACCTTTGACCTCTCAGTGTCAAAGTCCTACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR GCA 90 bp AATGAGATGACAAGACAGCGCTGTGCAAAGGGGATGCAGGAAGAGAAGGCAGGATTAACCTGGCGAAGCTaGTCGAGCATCCACTGTGAT +
Preference number: 2 (lower is better)
Translates to: NEMTRQRCAKGMQEEKAGLTWRS*SSIHCD
Trigger: ATCACAGTGGATGCTCGAGCAGCTTCGCCAGGTTAA...TCCTGCCTTCTCTTCCTGCATCCCCTTTGCACAGCGCTGTCTTGTCATCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR GCA 90 bp ACACCTTATCTAAAGAGGTCAATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGGCTTGCCTTCTGCACTaGGCTGGTCACGCTGTCAGC +
Preference number: 2 (lower is better)
Translates to: TPYLKRSICLLGILPVPVACLLH*AGHAVS
Trigger: GCTGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGC...CACTGGCACTGGCAGTATTCCTAACAAGCAGATTGACCTCTTTAGATAAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp CTGGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTATTGCCTCGCAAACTTaGCCACAGTATCAGGGAAAC +
Preference number: 2 (lower is better)
Translates to: LDSTKVCQTLQLGFGTLIIASQT*PQYQGN
Trigger: GTTTCCCTGATACTGTGGCCAAGTTTGCGAGGCAAT...AATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp CAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTGCCAAACTCTCCAGCTaGGGTTCGGCACCCTTATTC +
Preference number: 2 (lower is better)
Translates to: QGKVSRSVSAIVVHFPEVAKLSS*GSAPLF
Trigger: GAATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGC...AACCTCAGGAAAGTGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR TCA 90 bp CAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTGAAGGTGCATTTTTCTaGCGCTGTGCTGGCTACCCA +
Preference number: 2 (lower is better)
Translates to: QGKVSRSVSAIVVHFPEVEGAFF*RCAGYP
Trigger: TGGGTAGCCAGCACAGCGTCAGAAAAATGCACCTTC...AACCTCAGGAAAGTGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR GCA 90 bp CAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTTCCAAGTTCACTCTCTaGCTCTGCACCAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: QGKVSRSVSAIVVHFPEVSKFTL*LCTNSS
Trigger: GCTGCTGTTGGTGCAGAGGCAGAGAGTGAACTTGGA...AACCTCAGGAAAGTGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp CCCACTGGTCAAGCCAGAGACCCCTTTGCCTTTGGTGGCCGCATTAGTTTCTATCTTTCCCTTTGGGTTTaGGAGGCACAAAATCTTCTC +
Preference number: 2 (lower is better)
Translates to: PTGQARDPFAFGGRISFYLSLWV*EAQNLL
Trigger: GAGAAGATTTTGTGCCTCCCAAACCCAAAGGGAAAG...ATAGAAACTAATGCGGCCACCAAAGGCAAAGGGGTCTCTGGCTTGACCAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR TCA 90 bp ACACCTTATCTAAAGAGGTCAATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGCACGCTGTCAGCAGCTaGATGGAGGATGCTGTTTCC +
Preference number: 2 (lower is better)
Translates to: TPYLKRSICLLGILPVPVHAVSS*MEDAVS
Trigger: GGAAACAGCATCCTCCATTCAGCTGCTGACAGCGTG...CACTGGCACTGGCAGTATTCCTAACAAGCAGATTGACCTCTTTAGATAAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR TCA 90 bp ACCTGGGTCACTGCAGGAGTCCTGGAACAAGTTAGAAGGCCAAGTTATTTTCTATATCAACATTTAGCATaGGGGCCCTCCCACACCCCT +
Preference number: 2 (lower is better)
Translates to: TWVTAGVLEQVRRPSYFLYQHLA*GPSHTP
Trigger: AGGGGTGTGGGAGGGCCCTCATGCTAAATGTTGATA...TAGAAAATAACTTGGCCTTCTAACTTGTTCCAGGACTCCTGCAGTGACCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR GCA 90 bp ACCTGGGTCACTGCAGGAGTCCTGGAACAAGTTAGAAGGCCAAGTTATTTTCTACTTGTGCGCAGTTTCTaGAAACTGCTGGGCGCTGTT +
Preference number: 2 (lower is better)
Translates to: TWVTAGVLEQVRRPSYFLLVRSF*KLLGAV
Trigger: AACAGCGCCCAGCAGTTTGCAGAAACTGCGCACAAG...TAGAAAATAACTTGGCCTTCTAACTTGTTCCAGGACTCCTGCAGTGACCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp ACCTGGGTCACTGCAGGAGTCCTGGAACAAGTTAGAAGGCCAAGTTATTTTCTACTAGGAGCTGCCACCTaGCATTGCCATTTTCAGCTC +
Preference number: 2 (lower is better)
Translates to: TWVTAGVLEQVRRPSYFLLGAAT*HCHFQL
Trigger: GAGCTGAAAATGGCAATGCCAGGTGGCAGCTCCTAG...TAGAAAATAACTTGGCCTTCTAACTTGTTCCAGGACTCCTGCAGTGACCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 90 bp GCAGATCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTAACTTaGCATGAAGCCCGGAGCTCAAGAAAGGACCACATTTCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: ADLFLRLWCTFLRLT*HEARSSRKDHISSN
Trigger: GTTTGAGGAAATGTGGTCCTTTCTTGAGCTCCGGGCTTCATGCAAAGTTAACCTCAGGAAAGTGCACCACAATCGCAGAAACAGATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR TCA 90 bp CAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTGCTTGTCCAGTAAAATaGCAGCTTCATGGTCAGCCT +
Preference number: 2 (lower is better)
Translates to: QGKVSRSVSAIVVHFPEVACPVK*QLHGQP
Trigger: AGGCTGACCATGAAGCTGTCATTTTACTGGACAAGC...AACCTCAGGAAAGTGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR GCA 90 bp CAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTATTTTTCTGACGCTGTaGTGGCTACCCACTGGTCAA +
Preference number: 2 (lower is better)
Translates to: QGKVSRSVSAIVVHFPEVIFLTL*WLPTGQ
Trigger: TTGACCAGTGGGTAGCCAGCACAGCGTCAGAAAAAT...AACCTCAGGAAAGTGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR GCA 90 bp GACAGCGCTATATTCAAACACAAGATGTTAACTACTATTCCATATTGCTTTCCCGCCTGGCTTGCCTTCTaGACTGCGCTGGTCACGCTG +
Preference number: 2 (lower is better)
Translates to: DSAIFKHKMLTTIPYCFPAWLAF*TALVTL
Trigger: CAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCAGGC...GGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATATAGCGCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR GCA 90 bp TCCTCTACCCAACTCAACAACTTAAATGTTTCCCCAGATTTCCACTATCCGTCTATTCAAGGCCTGGCTTaGCTTCTGCACTGCGCTGGT +
Preference number: 2 (lower is better)
Translates to: SSTQLNNLNVSPDFHYPSIQGLA*LLHCAG
Trigger: ACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAAT...AGACGGATAGTGGAAATCTGGGGAAACATTTAAGTTGTTGAGTTGGGTAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR GCA 90 bp TATGGCGGGGCCGTCAAAGCATTGCGTCTGCTGCAACATTGTGCTTTTTGGCAATTTCTGCGATTGTGGTaGACTTTCCTGAGGTTAACT +
Preference number: 2 (lower is better)
Translates to: YGGAVKALRLLQHCAFWQFLRLW*TFLRLT
Trigger: AGTTAACCTCAGGAAAGTGCACCACAATCGCAGAAA...TTGCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGACGGCCCCGCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp CAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTAAGAGTCCTGGTCCCTaGGAAAATAGCCACACCTTA +
Preference number: 2 (lower is better)
Translates to: QGKVSRSVSAIVVHFPEVKSPGP*ENSHTL
Trigger: TAAGGTGTGGCTATTTTCCCAGGGACCAGGACTCTT...AACCTCAGGAAAGTGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 90 bp CTCAGCTACTTTGGAATCAGCTTCCCAAACATTGTTGTTAGAGAGTaGGCAACCACTTCTGTTCTTGAATTTGGCGGACTGTCAGGGGGT +
Preference number: 2 (lower is better)
Translates to: LSYFGISFPNIVVRE*ATTSVLEFGGLSGG
Trigger: ACCCCCTGACAGTCCGCCAAATTCAAGAACAGAAGTGGTTGCCAACTCTCTAACAACAATGTTTGGGAAGCTGATTCCAAAGTAGCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR CAA 90 bp GTCCCTGGGAAAATAGCCACACCTTATCTAAAGAGGTCAATCTGCTaGTTAGGAATACTGCCAGTGCCAGTGATTCATAGGCACACATCC +
Preference number: 2 (lower is better)
Translates to: VPGKIATPYLKRSIC*LGILPVPVIHRHTS
Trigger: GGATGTGTGCCTATGAATCACTGGCACTGGCAGTATTCCTAACAAGCAGATTGACCTCTTTAGATAAGGTGTGGCTATTTTCCCAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR TCA 90 bp ATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGATTCATAGGCACACATCCCAGCTGTGTGGGAAGACATaGAAGAAAAATGCCTGTACC +
Preference number: 2 (lower is better)
Translates to: ICLLGILPVPVIHRHTSQLCGKT*KKNACT
Trigger: GGTACAGGCATTTTTCTTTCATGTCTTCCCACACAG...CTGGGATGTGTGCCTATGAATCACTGGCACTGGCAGTATTCCTAACAAGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR TCA 90 bp TATGGCGGGGCCGTCAAAGCATTGCGTCTGCTGCAACATTGTGCTTTTTGGCAATTATCAGTGCACTATTaGTTGCTCTATTCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: YGGAVKALRLLQHCAFWQLSVHY*LLYSVW
Trigger: CCACACAGAATAGAGCAATCAATAGTGCACTGATAA...TTGCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGACGGCCCCGCCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 90 bp ATCCACTGTGATCTCCGAACAAATGATGTGGAGCCTTCAAACTGTTaGACCTTTGTGATGGACGCCTGTGTGGGTTTCTTGTTTGTCACT +
Preference number: 2 (lower is better)
Translates to: IHCDLRTNDVEPSNC*TFVMDACVGFLFVT
Trigger: AGTGACAAACAAGAAACCCACACAGGCGTCCATCACAAAGGTCAAACAGTTTGAAGGCTCCACATCATTTGTTCGGAGATCACAGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 90 bp ATGTTAACTACTATTCCATATTGCTTTCCCAATTGCCTCGCAAACTaGGCCACAGTATCAGGGAAACAGGGCTACCAGGGCCAAGAATTC +
Preference number: 2 (lower is better)
Translates to: MLTTIPYCFPNCLAN*ATVSGKQGYQGQEF
Trigger: GAATTCTTGGCCCTGGTAGCCCTGTTTCCCTGATACTGTGGCCAAGTTTGCGAGGCAATTGGGAAAGCAATATGGAATAGTAGTTAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR GCA 90 bp ACATCCCAGTTTCACACAACTGCAAGTCTGGCCATGACACTCTCTCACTCTCATGACATGAAAGAAAAATaGCTGTACCATCACCCTTCC +
Preference number: 2 (lower is better)
Translates to: TSQFHTTASLAMTLSHSHDMKEK*LYHHPS
Trigger: GGAAGGGTGATGGTACAGGCATTTTTCTTTCATGTC...ATGAGAGTGAGAGAGTGTCATGGCCAGACTTGCAGTTGTGTGAAACTGGGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR GCA 90 bp ACACCTTATCTAAAGAGGTCAATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGCCAGTTTCACACAACTaGAAGTCTGGCCATGACACT +
Preference number: 2 (lower is better)
Translates to: TPYLKRSICLLGILPVPVPVSHN*KSGHDT
Trigger: AGTGTCATGGCCAGACTTGCAGTTGTGTGAAACTGG...CACTGGCACTGGCAGTATTCCTAACAAGCAGATTGACCTCTTTAGATAAGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp ACCTGGGTCACTGCAGGAGTCCTGGAACAAGTTAGAAGGCCAAGTTATTTTCTAGCAGTTAATAAACTCTaGCTTCCTGTCCGTGAGGTA +
Preference number: 2 (lower is better)
Translates to: TWVTAGVLEQVRRPSYFLAVNKL*LPVREV
Trigger: TACCTCACGGACAGGAAGCCAGAGTTTATTAACTGC...TAGAAAATAACTTGGCCTTCTAACTTGTTCCAGGACTCCTGCAGTGACCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp GCTTTGAACTCATTCAATTCTCTGAACACTCTAGTACGTAGGTACTATTCTCATAGCAATCTGAGGCTCTaGCCTCCAGCAGGGCTGTCT +
Preference number: 2 (lower is better)
Translates to: ALNSFNSLNTLVRRYYSHSNLRL*PPAGLS
Trigger: AGACAGCCCTGCTGGAGGCCAGAGCCTCAGATTGCT...ATGAGAATAGTACCTACGTACTAGAGTGTTCAGAGAATTGAATGAGTTCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp ACACCTTATCTAAAGAGGTCAATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGACACCCCTTTCCCTTTaGGTTTGGGAGGCACAAAAT +
Preference number: 2 (lower is better)
Translates to: TPYLKRSICLLGILPVPVTPLSL*VWEAQN
Trigger: ATTTTGTGCCTCCCAAACCCAAAGGGAAAGGGGTGT...CACTGGCACTGGCAGTATTCCTAACAAGCAGATTGACCTCTTTAGATAAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR GCA 90 bp GCCACCTTAGGAAGAGCAATTTTACAATCTTCCTTGGTAACCTGGTTCATGGTTGGATCTGGAAGAAGGTaGATTTTTCTGACGCTGTGC +
Preference number: 2 (lower is better)
Translates to: ATLGRAILQSSLVTWFMVGSGRR*IFLTLC
Trigger: GCACAGCGTCAGAAAAATGCACCTTCTTCCAGATCC...AACCATGAACCAGGTTACCAAGGAAGATTGTAAAATTGCTCTTCCTAAGGTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp ATGACAGTGACAAGAGAAACATCTGTGAGTACACAGAGGGTTTTAGGTAGGCTTCACACATACACACAGTaGGAGGAGGCAAAAACCCAA +
Preference number: 2 (lower is better)
Translates to: MTVTRETSVSTQRVLGRLHTYTQ*EEAKTQ
Trigger: TTGGGTTTTTGCCTCCTCCCACTGTGTGTATGTGTG...AAGCCTACCTAAAACCCTCTGTGTACTCACAGATGTTTCTCTTGTCACTGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR CAA 90 bp GGATCATTTTCTATCTGCACTGTAGACAACAAGCACCTGCGTATTTaGAAGTCAGGGTTGTGCAAAAGTGATCCATTGACTCTTGCACCT +
Preference number: 2 (lower is better)
Translates to: GSFSICTVDNKHLRI*KSGLCKSDPLTLAP
Trigger: AGGTGCAAGAGTCAATGGATCACTTTTGCACAACCCTGACTTCAAAATACGCAGGTGCTTGTTGTCTACAGTGCAGATAGAAAATGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR GCA 90 bp ACACCTTATCTAAAGAGGTCAATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGCAACAAATCAAACTCTaGCGAATCCCCATTAGGATC +
Preference number: 2 (lower is better)
Translates to: TPYLKRSICLLGILPVPVQQIKL*RIPIRI
Trigger: GATCCTAATGGGGATTCGGCAGAGTTTGATTTGTTG...CACTGGCACTGGCAGTATTCCTAACAAGCAGATTGACCTCTTTAGATAAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CCA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTGGTATGAACGCAGCCTaGAAACTAATCATTAGAGGG +
Preference number: 2 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTGMNAA*KLIIRG
Trigger: CCCTCTAATGATTAGTTTCCAGGCTGCGTTCATACC...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR CCA 90 bp GACAGCGCTATATTCAAACACAAGATGTTAACTACTATTCCATATTGCTTTCCCCTCTGGCAGGTATGGTaGAGGATCTGGAAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: DSAIFKHKMLTTIPYCFPLWQVW*RIWKKV
Trigger: CACCTTCTTCCAGATCCTCCACCATACCTGCCAGAG...GGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATATAGCGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 90 bp GCTTCCCAAACATTGTTGTTAGAGAGTTGGCAACCACTTCTGTTCTaGAATTTGGCGGACTGTCAGGGGGTTTTAGATTTATCCTTTCAA +
Preference number: 2 (lower is better)
Translates to: ASQTLLLESWQPLLF*NLADCQGVLDLSFQ
Trigger: TTGAAAGGATAAATCTAAAACCCCCTGACAGTCCGCCAAATTCAAGAACAGAAGTGGTTGCCAACTCTCTAACAACAATGTTTGGGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR CAA 90 bp AATCTTGGGTTTCACAGTATGCTTATGACCTCATCCTCAGCTACTTaGGAATCAGCTTCCCAAACATTGTTGTTAGAGAGTTGGCAACCA +
Preference number: 2 (lower is better)
Translates to: NLGFHSMLMTSSSAT*ESASQTLLLESWQP
Trigger: TGGTTGCCAACTCTCTAACAACAATGTTTGGGAAGCTGATTCCAAAGTAGCTGAGGATGAGGTCATAAGCATACTGTGAAACCCAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR TCA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTTGTGTGTGTGCATTCTaGACTGAGATCTGCAAACAA +
Preference number: 2 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTCVCAF*TEICKQ
Trigger: TTGTTTGCAGATCTCAGTTCAGAATGCACACACACA...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR TCA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTCCAACTCTCTATCTCTaGAACCAGAATCCAATTTGG +
Preference number: 2 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTPTLYL*NQNPIW
Trigger: CCAAATTGGATTCTGGTTTCAGAGATAGAGAGTTGG...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR TCA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTTTCACAGTATGCTTATaGCCTCATCCTCAGCTACTT +
Preference number: 2 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTFTVCL*PHPQLL
Trigger: AAGTAGCTGAGGATGAGGTCATAAGCATACTGTGAA...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR TCA 90 bp AATAGCTTCCAACGGTACTCACCAAATGGCATGTTCCTCGCTTCTTTAAATTTTAAATCACGAGGTGTGTaGCCAACTGTATTGAAACTG +
Preference number: 2 (lower is better)
Translates to: NSFQRYSPNGMFLASLNFKSRGV*PTVLKL
Trigger: CAGTTTCAATACAGTTGGTCACACACCTCGTGATTT...AAAATTTAAAGAAGCGAGGAACATGCCATTTGGTGAGTACCGTTGGAAGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR CCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTCACACATACACACAGTaGGAGGAGGCAAAAACCCAA +
Preference number: 2 (lower is better)
Translates to: FHLGKITSDVTTLKCLPAHTYTQ*EEAKTQ
Trigger: TTGGGTTTTTGCCTCCTCCCACTGTGTGTATGTGTG...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
3UTR-3UTR CCA 90 bp GAGAAGTGCAGAAATGAAACAAATGAAATGTCTTCTGACAAGCTCAACCAAACTACGGTACTCACCAAATaGCATGTTCCTCGCTTCTTT +
Preference number: 2 (lower is better)
Translates to: EKCRNETNEMSSDKLNQTTVLTK*HVPRFF
Trigger: AAAGAAGCGAGGAACATGCCATTTGGTGAGTACCGT...AGTTTGGTTGAGCTTGTCAGAAGACATTTCATTTGTTTCATTTCTGCACTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR GCA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTGCAATTGCCATGAAATaGAATTTGTCAAGAAACTCA +
Preference number: 2 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTAIAMK*NLSRNS
Trigger: TGAGTTTCTTGACAAATTGCATTTCATGGCAATTGC...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR GCA 90 bp GAGAAGTGCAGAAATGAAACAAATGAAATGTCTTCTGACAAGCTCAACCAAACTCAGCTTAAAAATCAATaGGCTGCAGTGGTAGGCTTA +
Preference number: 2 (lower is better)
Translates to: EKCRNETNEMSSDKLNQTQLKNQ*AAVVGL
Trigger: TAAGCCTACCACTGCAGCGCATTGATTTTTAAGCTG...AGTTTGGTTGAGCTTGTCAGAAGACATTTCATTTGTTTCATTTCTGCACTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR TCA 90 bp GCTTTGAACTCATTCAATTCTCTGAACACTCTAGTACGTAGGTACTATTCTCATCACCAAGATGGTAAATaGCAGCGCTATATTCAAACA +
Preference number: 2 (lower is better)
Translates to: ALNSFNSLNTLVRRYYSHHQDGK*QRYIQT
Trigger: TGTTTGAATATAGCGCTGTCATTTACCATCTTGGTG...ATGAGAATAGTACCTACGTACTAGAGTGTTCAGAGAATTGAATGAGTTCAAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR TCA 90 bp TTCTTGAATTTGGCGGACTGTCAGGGGGTTTTAGATTTATCCTTTCAATTATTTAGCCCCTTATTATCTTaGGTAATAGAAAATCACGAG +
Preference number: 2 (lower is better)
Translates to: FLNLADCQGVLDLSFQLFSPLLS*VIENHE
Trigger: CTCGTGATTTTCTATTACTCAAGATAATAAGGGGCT...AAATAATTGAAAGGATAAATCTAAAACCCCCTGACAGTCCGCCAAATTCAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR GCA 90 bp TTCTTGAATTTGGCGGACTGTCAGGGGGTTTTAGATTTATCCTTTCAATTATTTGCAATTGCCATGAAATaGAATTTGTCAAGAAACTCA +
Preference number: 2 (lower is better)
Translates to: FLNLADCQGVLDLSFQLFAIAMK*NLSRNS
Trigger: TGAGTTTCTTGACAAATTGCATTTCATGGCAATTGC...AAATAATTGAAAGGATAAATCTAAAACCCCCTGACAGTCCGCCAAATTCAAGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR CCA 72 bp GCTCGGCCTAATCGCTCTCCACGCTCATTCAAGGCCTaGCTTGCCTTCTGCACTGCGCTGGTCACGCTGTCA +
Preference number: 3 (lower is better)
Translates to: ARPNRSPRSFKA*LAFCTALVTLS
Trigger: TGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCGAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 72 bp GAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTTGTaGGGAGGCCTAGGTAGGACTTTGACACTGAGAGGT +
Preference number: 3 (lower is better)
Translates to: EGQGLLLRPSLL*GGLGRTLTLRG
Trigger: ACCTCTCAGTGTCAAAGTCCTACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR CCA 72 bp AAAGGACCACATTTCCTCAAACCAGGCTCACCAGAGTaGAGGTGGGGGAGTCAGTCTAGGAAGGCAGGGCGG +
Preference number: 3 (lower is better)
Translates to: KGPHFLKPGSPE*RWGSQSRKAGR
Trigger: CCGCCCTGCCTTCCTAGACTGACTCCCCCACCTCCACTCTGGTGAGCCTGGTTTGAGGAAATGTGGTCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CAA 90 bp AAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTTGTGGGGAGGCCTAGGTCTTCTGTTCTTGAATTaGGCGGACTGTCAGGGGGTT +
Preference number: 3 (lower is better)
Translates to: KEGQGLLLRPSLLWGGLGLLFLN*ADCQGV
Trigger: AACCCCCTGACAGTCCGCCAAATTCAAGAACAGAAG...ACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR CCA 72 bp GTGTTTGTACAGCCCCCTCTGGGAGGGACGCCTACGTaGACGACATCCAGGTATTGTCTATGCCACCTTAGG +
Preference number: 3 (lower is better)
Translates to: VFVQPPLGGTPT*TTSRYCLCHLR
Trigger: CCTAAGGTGGCATAGACAATACCTGGATGTCGTCCACGTAGGCGTCCCTCCCAGAGGGGGCTGTACAAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CAA 90 bp AAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTTGTGGGGAGGCCTAGGTCAACCACTTCTGTTCTaGAATTTGGCGGACTGTCAG +
Preference number: 3 (lower is better)
Translates to: KEGQGLLLRPSLLWGGLGQPLLF*NLADCQ
Trigger: CTGACAGTCCGCCAAATTCAAGAACAGAAGTGGTTG...ACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR GCA 72 bp CTGCCACCTGGCATTGCCATTTTCAGCTCAGGACTCTaGCATGTGTTCTGGCCCCCACTTGTAAGCACAGCT +
Preference number: 3 (lower is better)
Translates to: LPPGIAIFSSGL*HVFWPPLVSTA
Trigger: AGCTGTGCTTACAAGTGGGGGCCAGAACACATGGCAGAGTCCTGAGCTGAAAATGGCAATGCCAGGTGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CAA 90 bp AAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTTGTGGGGAGGCCTAGGTGCTTCCCAAACATTGTaGTTAGAGAGTTGGCAACCA +
Preference number: 3 (lower is better)
Translates to: KEGQGLLLRPSLLWGGLGASQTL*LESWQP
Trigger: TGGTTGCCAACTCTCTAACAACAATGTTTGGGAAGC...ACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR CAA 90 bp CGGCCTAATCGCTCTCCACGCTCATTCAAGGCCTGGCTTGCCTTCTGCACTGCGGTGTGGGTTTCTTGTTaGTCACTTTTTCAGTCCACC +
Preference number: 3 (lower is better)
Translates to: RPNRSPRSFKAWLAFCTAVWVSC*SLFQST
Trigger: GGTGGACTGAAAAAGTGACAAACAAGAAACCCACAC...CGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CAA 90 bp ATCCAGTGTTTGTACAGCCCCCTCTGGGAGGGACGCCTACGTGGACGACATCCATCTAGCCAATTCTCCTaGAAGGAACTCGAAATGGGC +
Preference number: 3 (lower is better)
Translates to: IQCLYSPLWEGRLRGRHPSSQFS*KELEMG
Trigger: GCCCATTTCGAGTTCCTTCAAGGAGAATTGGCTAGA...TGGATGTCGTCCACGTAGGCGTCCCTCCCAGAGGGGGCTGTACAAACACTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 72 bp ACCTCTGGCAGGTATGGTGGAGGATCTGGAAGAAGGTaGATTTTTCTGACGCTGTGCTGGCTACCCACTGGT +
Preference number: 3 (lower is better)
Translates to: TSGRYGGGSGRR*IFLTLCWLPTG
Trigger: ACCAGTGGGTAGCCAGCACAGCGTCAGAAAAATGCACCTTCTTCCAGATCCTCCACCATACCTGCCAGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 72 bp GTTCGGCACCCTTATTCAACTGGGAGCTCTAGGAGCTaGCACCTGGCATTGCCATTTTCAGCTCAGGACTCT +
Preference number: 3 (lower is better)
Translates to: VRHPYSTGSSRS*HLALPFSAQDS
Trigger: AGAGTCCTGAGCTGAAAATGGCAATGCCAGGTGGCAGCTCCTAGAGCTCCCAGTTGAATAAGGGTGCCGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR TCA 72 bp TGCCTTCTGCACTGCGCTGGTCACGCTGTCAGCAGCTaGATGGAGGATGCTGTTTCCTCCCATAATTTTGGA +
Preference number: 3 (lower is better)
Translates to: CLLHCAGHAVSS*MEDAVSSHNFG
Trigger: TCCAAAATTATGGGAGGAAACAGCATCCTCCATTCAGCTGCTGACAGCGTGACCAGCGCAGTGCAGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 72 bp CTTGAAGGAACTCGAAATGGGCCCCACGGGCAACAGTaGAGTAAGACCCTGTCACGACAGAGAATGAATGAG +
Preference number: 3 (lower is better)
Translates to: LEGTRNGPHGQQ*SKTLSRQRMNE
Trigger: CTCATTCATTCTCTGTCGTGACAGGGTCTTACTGCACTGTTGCCCGTGGGGCCCATTTCGAGTTCCTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 72 bp ACTGACTCACTGACTATGGCGGGGCCGTCAAAGCATTaGGTCTGCTGCAACATTGTGCTTTTTGGCAAGGGA +
Preference number: 3 (lower is better)
Translates to: TDSLTMAGPSKH*VCCNIVLFGKG
Trigger: TCCCTTGCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGACGGCCCCGCCATAGTCAGTGAGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 72 bp TCTGCCGAATCCCCATTAGGATCGATACCATTAACCTaGCGAAGCTGCTCGAGCATCCACTGTGATCTCCGA +
Preference number: 3 (lower is better)
Translates to: SAESPLGSIPLT*RSCSSIHCDLR
Trigger: TCGGAGATCACAGTGGATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGATCCTAATGGGGATTCGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 72 bp CGAAAGGTCACCTTGTGCGCAGTTTCTGCAAACTGCTaGGCGCTGTTCTTCAGGTCTTCTGTCTTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: RKVTLCAVSANC*ALFFRSSVFSS
Trigger: AGAGGAGAAGACAGAAGACCTGAAGAACAGCGCCCAGCAGTTTGCAGAAACTGCGCACAAGGTGACCTTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 72 bp TTAGGTTATCCAATCCAGTGTTTGTACAGCCCCCTCTaGGAGGGACGCCTACGTGGACGACATCCAGGTATT +
Preference number: 3 (lower is better)
Translates to: LGYPIQCLYSPL*EGRLRGRHPGI
Trigger: AATACCTGGATGTCGTCCACGTAGGCGTCCCTCCCAGAGGGGGCTGTACAAACACTGGATTGGATAACCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 72 bp ACCCTTATTCAACTGGGAGCTCTAGGAGCTGCCACCTaGCATTGCCATTTTCAGCTCAGGACTCTGCCATGT +
Preference number: 3 (lower is better)
Translates to: TLIQLGALGAAT*HCHFQLRTLPC
Trigger: ACATGGCAGAGTCCTGAGCTGAAAATGGCAATGCCAGGTGGCAGCTCCTAGAGCTCCCAGTTGAATAAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CAA 90 bp GGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTCAGAGCCTTCAAACTGTTaGACCTTTGTGATGGACGCC +
Preference number: 3 (lower is better)
Translates to: GLYKGVPNSPAGVRHPYSEPSNC*TFVMDA
Trigger: GGCGTCCATCACAAAGGTCAAACAGTTTGAAGGCTC...TGAATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CAA 90 bp TATGGCGGGGCCGTCAAAGCATTGCGTCTGCTGCAACATTGTGCTTTTTGGCAATATCCAATCCAGTGTTaGTACAGCCCCCTCTGGGAG +
Preference number: 3 (lower is better)
Translates to: YGGAVKALRLLQHCAFWQYPIQC*YSPLWE
Trigger: CTCCCAGAGGGGGCTGTACAAACACTGGATTGGATA...TTGCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGACGGCCCCGCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CAA 90 bp TCCTTGAAGGAACTCGAAATGGGCCCCACGGGCAACAGTGCAGTAAGACCCTGTTTAGGTTATCCATCCTaGTTTCCTCAGCAGAAGTGG +
Preference number: 3 (lower is better)
Translates to: SLKELEMGPTGNSAVRPCLGYPS*FPQQKW
Trigger: CCACTTCTGCTGAGGAAACAAGGATGGATAACCTAA...ACAGGGTCTTACTGCACTGTTGCCCGTGGGGCCCATTTCGAGTTCCTTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 72 bp CGGGGCCGTCAAAGCATTGCGTCTGCTGCAACATTGTaGTTTTTGGCAAGGGAAAGTGAGCAGATCTGTTTC +
Preference number: 3 (lower is better)
Translates to: RGRQSIASAATL*FLARESEQICF
Trigger: GAAACAGATCTGCTCACTTTCCCTTGCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGACGGCCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 72 bp TTCTGCACTGCGCTGGTCACGCTGTCAGCAGCTGAATaGAGGATGCTGTTTCCTCCCATAATTTTGGATTGG +
Preference number: 3 (lower is better)
Translates to: FCTALVTLSAAE*RMLFPPIILDW
Trigger: CCAATCCAAAATTATGGGAGGAAACAGCATCCTCCATTCAGCTGCTGACAGCGTGACCAGCGCAGTGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 72 bp GAAACAGGGCTACCAGGGCCAAGAATTCAGGCCATCTaGTTAGGTTATCCAATCCAGTGTTTGTACAGCCCC +
Preference number: 3 (lower is better)
Translates to: ETGLPGPRIQAI*LGYPIQCLYSP
Trigger: GGGGCTGTACAAACACTGGATTGGATAACCTAACCAGATGGCCTGAATTCTTGGCCCTGGTAGCCCTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 72 bp CTATTCCATATTGCTTTCCCAATTGCCTCGCAAACTTaGCCACAGTATCAGGGAAACAGGGCTACCAGGGCC +
Preference number: 3 (lower is better)
Translates to: LFHIAFPIASQT*PQYQGNRATRA
Trigger: GGCCCTGGTAGCCCTGTTTCCCTGATACTGTGGCCAAGTTTGCGAGGCAATTGGGAAAGCAATATGGAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CAA 90 bp TATGGCGGGGCCGTCAAAGCATTGCGTCTGCTGCAACATTGTGCTTTTTGGCAACCTTTCCCTTTGGGTTaGGGAGGCACAAAATCTTCT +
Preference number: 3 (lower is better)
Translates to: YGGAVKALRLLQHCAFWQPFPLG*GGTKSS
Trigger: AGAAGATTTTGTGCCTCCCAAACCCAAAGGGAAAGG...TTGCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGACGGCCCCGCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR TCA 72 bp ATAAACACAAGCTGTCCACGCCTCACCCCTCCCGAGTaGAAGCAGGTAACTGCTAGGCATAAATTTTCCCAC +
Preference number: 3 (lower is better)
Translates to: INTSCPRLTPPE*KQVTARHKFSH
Trigger: GTGGGAAAATTTATGCCTAGCAGTTACCTGCTTTCACTCGGGAGGGGTGAGGCGTGGACAGCTTGTGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR TCA 72 bp GCGATTGTGGTGCACTTTCCTGAGGTTAACTTTGCATaGAGCCCGGAGCTCAAGAAAGGACCACATTTCCTC +
Preference number: 3 (lower is better)
Translates to: AIVVHFPEVNFA*SPELKKGPHFL
Trigger: GAGGAAATGTGGTCCTTTCTTGAGCTCCGGGCTTCATGCAAAGTTAACCTCAGGAAAGTGCACCACAATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CAA 90 bp GGACAGCAAAGAACTTCACATGTGTTATCACTGGGCTCCTCTGCAAGAGGCTGGTCATCCTCAGCTACTTaGGAATCAGCTTCCCAAACA +
Preference number: 3 (lower is better)
Translates to: GQQRTSHVLSLGSSARGWSSSAT*ESASQT
Trigger: TGTTTGGGAAGCTGATTCCAAAGTAGCTGAGGATGA...CCAGCCTCTTGCAGAGGAGCCCAGTGATAACACATGTGAAGTTCTTTGCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR TCA 72 bp TGTCTGCATTTTCAGATAGATCTAGCCAATTCTCCTTaGAGGAACTCGAAATGGGCCCCACGGGCAACAGTG +
Preference number: 3 (lower is better)
Translates to: CLHFQIDLANSP*RNSKWAPRATV
Trigger: CACTGTTGCCCGTGGGGCCCATTTCGAGTTCCTTCAAGGAGAATTGGCTAGATCTATCTGAAAATGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 72 bp TCCCCATTAGGATCGATACCATTAACCTGGCGAAGCTaGTCGAGCATCCACTGTGATCTCCGAACAAATGAT +
Preference number: 3 (lower is better)
Translates to: SPLGSIPLTWRS*SSIHCDLRTND
Trigger: ATCATTTGTTCGGAGATCACAGTGGATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGATCCTAATGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 72 bp AGGCCAAGTTATTTTCTACTGGACTCTACAAAGGTGTaGCAAACTCTCCAGCTGGGGTTCGGCACCCTTATT +
Preference number: 3 (lower is better)
Translates to: RPSYFLLDSTKV*QTLQLGFGTLI
Trigger: AATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCCAGTAGAAAATAACTTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CAA 90 bp GGACAGCAAAGAACTTCACATGTGTTATCACTGGGCTCCTCTGCAAGAGGCTGGTCAGCTTCCCAAACATaGTTGTTAGAGAGTTGGCAA +
Preference number: 3 (lower is better)
Translates to: GQQRTSHVLSLGSSARGWSASQT*LLESWQ
Trigger: TTGCCAACTCTCTAACAACAATGTTTGGGAAGCTGA...CCAGCCTCTTGCAGAGGAGCCCAGTGATAACACATGTGAAGTTCTTTGCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR CAA 90 bp GGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTCATCCCATAATTTTGGATaGGCAGTTAATAAACTCTGG +
Preference number: 3 (lower is better)
Translates to: GLYKGVPNSPAGVRHPYSSHNFG*AVNKLW
Trigger: CCAGAGTTTATTAACTGCCAATCCAAAATTATGGGA...TGAATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CAA 90 bp GACAGCGCTATATTCAAACACAAGATGTTAACTACTATTCCATATTGCTTTCCCCATTCAAGGCCTGGCTaGCCTTCTGCACTGCGCTGG +
Preference number: 3 (lower is better)
Translates to: DSAIFKHKMLTTIPYCFPHSRPG*PSALRW
Trigger: CCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATG...GGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATATAGCGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CAA 90 bp CAGCTTCATGGTCAGCCTATGCTAGCAGGTCCAAATCAAGAGTCCTGGTCCCTGTTTATCAGTGCACTATaGATTGCTCTATTCTGTGTG +
Preference number: 3 (lower is better)
Translates to: QLHGQPMLAGPNQESWSLFISAL*IALFCV
Trigger: CACACAGAATAGAGCAATCAATAGTGCACTGATAAA...CAGGGACCAGGACTCTTGATTTGGACCTGCTAGCATAGGCTGACCATGAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR GCA 72 bp GACAACAAGCACCTGCGTATTTTGAAGTCAGGGTTGTaGAAAAGTGATCCATTGACTCTTGCACCTGGGTCA +
Preference number: 3 (lower is better)
Translates to: DNKHLRILKSGL*KSDPLTLAPGS
Trigger: TGACCCAGGTGCAAGAGTCAATGGATCACTTTTGCACAACCCTGACTTCAAAATACGCAGGTGCTTGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR TCA 72 bp ACACATCCCAGTTTCACACAACTGCAAGTCTGGCCATaGCACTCTCTCACTCTCATACACATTAACAGACAC +
Preference number: 3 (lower is better)
Translates to: THPSFTQLQVWP*HSLTLIHINRH
Trigger: GTGTCTGTTAATGTGTATGAGAGTGAGAGAGTGTCATGGCCAGACTTGCAGTTGTGTGAAACTGGGATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 72 bp GTCAAAGCATTGCGTCTGCTGCAACATTGTGCTTTTTaGCAAGGGAAAGTGAGCAGATCTGTTTCTGCGATT +
Preference number: 3 (lower is better)
Translates to: VKALRLLQHCAF*QGKVSRSVSAI
Trigger: AATCGCAGAAACAGATCTGCTCACTTTCCCTTGCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR-3UTR CAA 90 bp GCCACCTTAGGAAGAGCAATTTTACAATCTTCCTTGGTAACCTGGTTCATGGTTTCACGGAAGCTGCTGTaGTTGTTAAAGAAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: ATLGRAILQSSLVTWFMVSRKLL*LLKKLR
Trigger: CCTCAGCTTCTTTAACAACAACAGCAGCTTCCGTGA...AACCATGAACCAGGTTACCAAGGAAGATTGTAAAATTGCTCTTCCTAAGGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR TCA 72 bp TGCACTATTGATTGCTCTATTCTGTGTGGGAAGACATaGAAGAAAAATGCCTGTACCATCACCCTTCCCAGA +
Preference number: 3 (lower is better)
Translates to: CTIDCSILCGKT*KKNACTITLPR
Trigger: TCTGGGAAGGGTGATGGTACAGGCATTTTTCTTTCATGTCTTCCCACACAGAATAGAGCAATCAATAGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CCA 72 bp TTGGAATCAGCTTCCCAAACATTGTTGTTAGAGAGTTaGCAACCACTTCTGTTCTTGAATTTGGCGGACTGT +
Preference number: 3 (lower is better)
Translates to: LESASQTLLLES*QPLLFLNLADC
Trigger: ACAGTCCGCCAAATTCAAGAACAGAAGTGGTTGCCAACTCTCTAACAACAATGTTTGGGAAGCTGATTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR CAA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTTCTGAGATGTGCAGCTaGTCTCCTAGTTTCACAAAA +
Preference number: 3 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTSEMCS*SPSFTK
Trigger: TTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGA...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR CCA 72 bp AGTAACTATTGTAATTCTACCAGGGAAGAAGAATCTTaGGTTTCACAGTATGCTTATGACCTCATCCTCAGC +
Preference number: 3 (lower is better)
Translates to: SNYCNSTREEES*VSQYAYDLILS
Trigger: GCTGAGGATGAGGTCATAAGCATACTGTGAAACCCAAGATTCTTCTTCCCTGGTAGAATTACAATAGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR-3UTR CAA 90 bp GAGAAGTGCAGAAATGAAACAAATGAAATGTCTTCTGACAAGCTCAACCAAACTCAGGGAAGAAGAATCTaGGGTTTCACAGTATGCTTA +
Preference number: 3 (lower is better)
Translates to: EKCRNETNEMSSDKLNQTQGRRI*GFTVCL
Trigger: TAAGCATACTGTGAAACCCAAGATTCTTCTTCCCTG...AGTTTGGTTGAGCTTGTCAGAAGACATTTCATTTGTTTCATTTCTGCACTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR GCA 72 bp ATGACAGTTATTTTGTCTAAGACCGTATTAATACTTTaGACTGCAGCACCTTCTACAAGAGGACAGCAAAGA +
Preference number: 3 (lower is better)
Translates to: MTVILSKTVLIL*TAAPSTRGQQR
Trigger: TCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGTCTTAGACAAAATAACTGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR GCA 72 bp TTGTGGTGTTTTATATCAGACCAGGCAAGGTGCAATTaGCATGAAATGCAATTTGTCAAGAAACTCACATAT +
Preference number: 3 (lower is better)
Translates to: LWCFISDQARCN*HEMQFVKKLTY
Trigger: ATATGTGAGTTTCTTGACAAATTGCATTTCATGGCAATTGCACCTTGCCTGGTCTGATATAAAACACCACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR GCA 72 bp ATATTCAAACACAAGATGTTAACTACTATTCCATATTaGTTTCCCAATTGCCTCGCAAACTTGGCCACAGTA +
Preference number: 3 (lower is better)
Translates to: IFKHKMLTTIPY*FPNCLANLATV
Trigger: TACTGTGGCCAAGTTTGCGAGGCAATTGGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR TCA 72 bp AACTCTTGTTTTAGCAGAATTTTATCAGTGCACTATTaGTTGCTCTATTCTGTGTGGGAAGACATGAAAGAA +
Preference number: 3 (lower is better)
Translates to: NSCFSRILSVHY*LLYSVWEDMKE
Trigger: TTCTTTCATGTCTTCCCACACAGAATAGAGCAATCAATAGTGCACTGATAAAATTCTGCTAAAACAAGAGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp AAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTTGTGGGGAGGCCTAGGTCGGCCCTCTCTGTTGTaGGGAGGCCTAGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: KEGQGLLLRPSLLWGGLGRPSLL*GGLGRT
Trigger: AGTCCTACCTAGGCCTCCCCACAACAGAGAGGGCCG...ACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR CAA 72 bp GGCCTAATCGCTCTCCACGCTCATTCAAGGCCTGGCTaGCCTTCTGCACTGCGCTGGTCACGCTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLIALHAHSRPG*PSALRWSRCQQ
Trigger: CTGCTGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp CGGCCTAATCGCTCTCCACGCTCATTCAAGGCCTGGCTTGCCTTCTGCACTGCGCTTGGGTTCCATCTCTaGACTCTCCCCTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: RPNRSPRSFKAWLAFCTALGFHL*TLPSPA
Trigger: TGCTGGTGAGGGGAGAGTTCAGAGATGGAACCCAAG...CGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp CGGCCTAATCGCTCTCCACGCTCATTCAAGGCCTGGCTTGCCTTCTGCACTGCGGGAGGGACGCCTACGTaGACGACATCCAGGTATTGT +
Preference number: 4 (lower is better)
Translates to: RPNRSPRSFKAWLAFCTAGGTPT*TTSRYC
Trigger: ACAATACCTGGATGTCGTCCACGTAGGCGTCCCTCC...CGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp AAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTTGTGGGGAGGCCTAGGTGAAGGTGCATTTTTCTaGCGCTGTGCTGGCTACCCA +
Preference number: 4 (lower is better)
Translates to: KEGQGLLLRPSLLWGGLGEGAFF*RCAGYP
Trigger: TGGGTAGCCAGCACAGCGTCAGAAAAATGCACCTTC...ACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp GGACAGCAAAGAACTTCACATGTGTTATCACTGGGCTCCTCTGCAAGAGGCTGGTCTGAGCATGCTCAGTaGCGCCGTGGGCGAGCCCGA +
Preference number: 4 (lower is better)
Translates to: GQQRTSHVLSLGSSARGWSEHAQ*RRGRAR
Trigger: TCGGGCTCGCCCACGGCGGCACTGAGCATGCTCAGA...CCAGCCTCTTGCAGAGGAGCCCAGTGATAACACATGTGAAGTTCTTTGCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323944.9
CDS-3UTR TCA 90 bp AAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTTGTGGGGAGGCCTAGGTGAGGACAGCACGCAGTaGATCTTTAACGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: KEGQGLLLRPSLLWGGLGEDSTQ*IFNAAF
Trigger: AAAGGCTGCGTTAAAGATTCACTGCGTGCTGTCCTC...ACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396700.5
CDS-3UTR GCA 90 bp GGACAGCAAAGAACTTCACATGTGTTATCACTGGGCTCCTCTGCAAGAGGCTGGGCCTGGCTTGCCTTCTaGACTGCGCTGGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: GQQRTSHVLSLGSSARGWAWLAF*TALVTL
Trigger: CAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCAGGC...CCAGCCTCTTGCAGAGGAGCCCAGTGATAACACATGTGAAGTTCTTTGCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR CAA 72 bp AAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTaGTGGGGAGGCCTAGGTAGGACTTTGACACTGAGA +
Preference number: 4 (lower is better)
Translates to: KEGQGLLLRPSL*WGGLGRTLTLR
Trigger: TCTCAGTGTCAAAGTCCTACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp AAGGCAGGAGTCATCCACTTAGAGCTGGATCCCCAGCTGGACCTGAGCGTGAGCAATGCTCTTGTCTACTaGCTCACTGACTATGGCGGG +
Preference number: 4 (lower is better)
Translates to: KAGVIHLELDPQLDLSVSNALVY*LTDYGG
Trigger: CCCGCCATAGTCAGTGAGTCAGTAGACAAGAGCATT...GCTCACGCTCAGGTCCAGCTGGGGATCCAGCTCTAAGTGGATGACTCCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTCCCCTGCCGTGCCAGTaGGCGGCACGCGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTPLPCQ*AARVPE
Trigger: CTCTGGGACGCGTGCCGCGCACTGGCACGGCAGGGG...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTTGTGGGGAGGCCTAGGTGGATCTGGAAGAAGGTaGATTTTTCTGACGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KEGQGLLLRPSLLWGGLGGSGRR*IFLTLC
Trigger: GCACAGCGTCAGAAAAATGCACCTTCTTCCAGATCC...ACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp GGACAGCAAAGAACTTCACATGTGTTATCACTGGGCTCCTCTGCAAGAGGCTGGGCTTGCCTTCTGCACTaGGCTGGTCACGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GQQRTSHVLSLGSSARGWACLLH*AGHAVS
Trigger: GCTGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGC...CCAGCCTCTTGCAGAGGAGCCCAGTGATAACACATGTGAAGTTCTTTGCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp AACCTCCAAAATCCAGATACCAAGAAACTAAAGGCCCTCTCCCAAGGACATTATCGAGCCCGAGCGCCCTaGCCCGGGGCAAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: NLQNPDTKKLKALSQGHYRARAP*PGAKSS
Trigger: GCTGCTCTTTGCCCCGGGCCAGGGCGCTCGGGCTCG...ATAATGTCCTTGGGAGAGGGCCTTTAGTTTCTTGGTATCTGGATTTTGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323944.9
CDS-3UTR CCA 90 bp TATGGCGGGGCCGTCAAAGCATTGCGTCTGCTGCAACATTGTGCTTTTTGGCAACCTTCTGCACTGCGCTaGTCACGCTGTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: YGGAVKALRLLQHCAFWQPSALR*SRCQQL
Trigger: CAGCTGCTGACAGCGTGACCAGCGCAGTGCAGAAGG...TTGCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGACGGCCCCGCCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp TCTCCTCTGCTCGGCCTAATCGCTCTCCACGCTCATTCAAGGCCTGGCTTGCCTACAGTGCTCATTATGTaGCTGAATAGGGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SPLLGLIALHAHSRPGLPTVLIM*LNRAGS
Trigger: TGACCCTGCCCTATTCAGTCACATAATGAGCACTGT...AGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCGAGCAGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp TCCTTGAAGGAACTCGAAATGGGCCCCACGGGCAACAGTGCAGTAAGACCCTGTTCCCTGTCCCTGTGTTaGGGATCCTCAATCACCAGT +
Preference number: 4 (lower is better)
Translates to: SLKELEMGPTGNSAVRPCSLSLC*GSSITS
Trigger: ACTGGTGATTGAGGATCCTCAACACAGGGACAGGGA...ACAGGGTCTTACTGCACTGTTGCCCGTGGGGCCCATTTCGAGTTCCTTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp CTGGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTTGTCTACTGACTCACTaGCTATGGCGGGGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: LDSTKVCQTLQLGFGTLICLLTH*LWRGRQ
Trigger: TTGACGGCCCCGCCATAGTCAGTGAGTCAGTAGACA...AATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp ATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGATTCATAGGCACACATCCCAGGCCTGGCTTGCCTTCTaGACTGCGCTGGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: ICLLGILPVPVIHRHTSQAWLAF*TALVTL
Trigger: CAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCAGGC...CTGGGATGTGTGCCTATGAATCACTGGCACTGGCAGTATTCCTAACAAGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp CTGGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTATTCAAGGCCTGGCTTaGCTTCTGCACTGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LDSTKVCQTLQLGFGTLIIQGLA*LLHCAG
Trigger: ACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAAT...AATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp AAGGCAGGAGTCATCCACTTAGAGCTGGATCCCCAGCTGGACCTGAGCGTGAGCGAGCAGATCTGTTTCTaGGATTGTGGTGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: KAGVIHLELDPQLDLSVSEQICF*DCGALS
Trigger: GGAAAGTGCACCACAATCGCAGAAACAGATCTGCTC...GCTCACGCTCAGGTCCAGCTGGGGATCCAGCTCTAAGTGGATGACTCCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp ATCCAGTGTTTGTACAGCCCCCTCTGGGAGGGACGCCTACGTGGACGACATCCAACACCCCTTTCCCTTTaGGTTTGGGAGGCACAAAAT +
Preference number: 4 (lower is better)
Translates to: IQCLYSPLWEGRLRGRHPTPLSL*VWEAQN
Trigger: ATTTTGTGCCTCCCAAACCCAAAGGGAAAGGGGTGT...TGGATGTCGTCCACGTAGGCGTCCCTCCCAGAGGGGGCTGTACAAACACTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 72 bp ATTCAGGCCATCTGGTTAGGTTATCCAATCCAGTGTTaGTACAGCCCCCTCTGGGAGGGACGCCTACGTGGA +
Preference number: 4 (lower is better)
Translates to: IQAIWLGYPIQC*YSPLWEGRLRG
Trigger: TCCACGTAGGCGTCCCTCCCAGAGGGGGCTGTACAAACACTGGATTGGATAACCTAACCAGATGGCCTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp AAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTTGTGGGGAGGCCTAGGTTGTGTGTGTGCATTCTaGACTGAGATCTGCAAACAA +
Preference number: 4 (lower is better)
Translates to: KEGQGLLLRPSLLWGGLGCVCAF*TEICKQ
Trigger: TTGTTTGCAGATCTCAGTTCAGAATGCACACACACA...ACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp CTCTGGCTTCCTGTCCGTGAGGTACCTCTGGCAGGTATGGTGGAGGATCTGGAAAGGGTTGTGCAAAAGTaGTCCATTGACTCTTGCACC +
Preference number: 4 (lower is better)
Translates to: LWLPVREVPLAGMVEDLERVVQK*SIDSCT
Trigger: GGTGCAAGAGTCAATGGATCACTTTTGCACAACCCT...TTCCAGATCCTCCACCATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp CTCTGGCTTCCTGTCCGTGAGGTACCTCTGGCAGGTATGGTGGAGGATCTGGAAGAGGTTAACTTTGCATaGAGCCCGGAGCTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: LWLPVREVPLAGMVEDLEEVNFA*SPELKK
Trigger: TTTCTTGAGCTCCGGGCTTCATGCAAAGTTAACCTC...TTCCAGATCCTCCACCATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp AATAGCTTCCAACGGTACTCACCAAATGGCATGTTCCTCGCTTCTTTAAATTTTCGCGCCGGCTCCTGCTaGCGCGCGCGAAAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: NSFQRYSPNGMFLASLNFRAGSC*RARKGR
Trigger: CCTCCCTTTTCGCGCGCGGCAGCAGGAGCCGGCGCG...AAAATTTAAAGAAGCGAGGAACATGCCATTTGGTGAGTACCGTTGGAAGCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323944.9
CDS-3UTR GCA 90 bp TTTAATGTGCACCATCTGATATTTTTACCCCCAGTAGACAAACTTTCTCTCTCCCCCCTGCCGTGCCAGTaGGCGGCACGCGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: FNVHHLIFLPPVDKLSLSPLPCQ*AARVPE
Trigger: CTCTGGGACGCGTGCCGCGCACTGGCACGGCAGGGG...GGAGAGAGAAAGTTTGTCTACTGGGGGTAAAAATATCAGATGGTGCACATTAAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp CAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTGCTTGCCTTCTGCACTaGGCTGGTCACGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: QGKVSRSVSAIVVHFPEVACLLH*AGHAVS
Trigger: GCTGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGC...AACCTCAGGAAAGTGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTGGGGGCAGGGTGCCGTaGCCGCCAGAAAAGCTCGCC +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLGGRVP*PPEKLA
Trigger: GGCGAGCTTTTCTGGCGGGCACGGCACCCTGCCCCC...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR GCA 90 bp TCCTTGAAGGAACTCGAAATGGGCCCCACGGGCAACAGTGCAGTAAGACCCTGTCGAAAGGTCACCTTGTaGGCAGTTTCTGCAAACTGC +
Preference number: 4 (lower is better)
Translates to: SLKELEMGPTGNSAVRPCRKVTL*AVSANC
Trigger: GCAGTTTGCAGAAACTGCGCACAAGGTGACCTTTCG...ACAGGGTCTTACTGCACTGTTGCCCGTGGGGCCCATTTCGAGTTCCTTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp CTCTGGCTTCCTGTCCGTGAGGTACCTCTGGCAGGTATGGTGGAGGATCTGGAACCAGTTTCACACAACTaGAAGTCTGGCCATGACACT +
Preference number: 4 (lower is better)
Translates to: LWLPVREVPLAGMVEDLEPVSHN*KSGHDT
Trigger: AGTGTCATGGCCAGACTTGCAGTTGTGTGAAACTGG...TTCCAGATCCTCCACCATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp ATGACAGTGACAAGAGAAACATCTGTGAGTACACAGAGGGTTTTAGGTAGGCTTAGGAAACGTGCAGCCTaGCTCGCGCCCCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: MTVTRETSVSTQRVLGRLRKRAA*LAPLPC
Trigger: GCACGGCAGGGGCGCGAGCCAGGCTGCACGTTTCCT...AAGCCTACCTAAAACCCTCTGTGTACTCACAGATGTTTCTCTTGTCACTGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396700.5
CDS-3UTR CCA 90 bp ATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGATTCATAGGCACACATCCCAGTTGTACAGCCCCCTCTaGGAGGGACGCCTACGTGGA +
Preference number: 4 (lower is better)
Translates to: ICLLGILPVPVIHRHTSQLYSPL*EGRLRG
Trigger: TCCACGTAGGCGTCCCTCCCAGAGGGGGCTGTACAA...CTGGGATGTGTGCCTATGAATCACTGGCACTGGCAGTATTCCTAACAAGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp CTCTGGCTTCCTGTCCGTGAGGTACCTCTGGCAGGTATGGTGGAGGATCTGGAAAAGAGTCCTGGTCCCTaGGAAAATAGCCACACCTTA +
Preference number: 4 (lower is better)
Translates to: LWLPVREVPLAGMVEDLEKSPGP*ENSHTL
Trigger: TAAGGTGTGGCTATTTTCCCAGGGACCAGGACTCTT...TTCCAGATCCTCCACCATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp CCCACTGGTCAAGCCAGAGACCCCTTTGCCTTTGGTGGCCGCATTAGTTTCTATATTGACTCTTGCACCTaGGTCACTGCAGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PTGQARDPFAFGGRISFYIDSCT*VTAGVL
Trigger: CAGGACTCCTGCAGTGACCCAGGTGCAAGAGTCAAT...ATAGAAACTAATGCGGCCACCAAAGGCAAAGGGGTCTCTGGCTTGACCAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 72 bp TGGCGGGGCCGTCAAAGCATTGCGTCTGCTGCAACATaGTGCTTTTTGGCAAGGGAAAGTGAGCAGATCTGT +
Preference number: 4 (lower is better)
Translates to: WRGRQSIASAAT*CFLARESEQIC
Trigger: ACAGATCTGCTCACTTTCCCTTGCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGACGGCCCCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp ACCTGGGTCACTGCAGGAGTCCTGGAACAAGTTAGAAGGCCAAGTTATTTTCTACCAACAGCAGCAATCTaGGGCTCTGGCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TWVTAGVLEQVRRPSYFLPTAAI*GSGLQQ
Trigger: CTGCTGGAGGCCAGAGCCTCAGATTGCTGCTGTTGG...TAGAAAATAACTTGGCCTTCTAACTTGTTCCAGGACTCCTGCAGTGACCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp ACATCCCAGTTTCACACAACTGCAAGTCTGGCCATGACACTCTCTCACTCTCATCTCACCCCTCCCGAGTaGAAGCAGGTAACTGCTAGG +
Preference number: 4 (lower is better)
Translates to: TSQFHTTASLAMTLSHSHLTPPE*KQVTAR
Trigger: CCTAGCAGTTACCTGCTTTCACTCGGGAGGGGTGAG...ATGAGAGTGAGAGAGTGTCATGGCCAGACTTGCAGTTGTGTGAAACTGGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp TCCTTGAAGGAACTCGAAATGGGCCCCACGGGCAACAGTGCAGTAAGACCCTGTACAGCTTACTCCTTCTaGGTCAACAGAGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: SLKELEMGPTGNSAVRPCTAYSF*VNRAML
Trigger: AAGCATGGCTCTGTTGACTCAGAAGGAGTAAGCTGT...ACAGGGTCTTACTGCACTGTTGCCCGTGGGGCCCATTTCGAGTTCCTTCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAGGCAGGTGGGTCACTTaGGCCCGGGAGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLGRWVT*AREAEA
Trigger: AGCCTCTGCCTCCCGGGCTCAAGTGACCCACCTGCC...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550887.5
CDS-3UTR GCA 90 bp GAGAAGTGCAGAAATGAAACAAATGAAATGTCTTCTGACAAGCTCAACCAAACTTCCCGCGCCGGCTCCTaGTGCCGCGCGCGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: EKCRNETNEMSSDKLNQTSRAGS*CRARKG
Trigger: CCCTTTTCGCGCGCGGCAGCAGGAGCCGGCGCGGGA...AGTTTGGTTGAGCTTGTCAGAAGACATTTCATTTGTTTCATTTCTGCACTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp TCTCCTCTGCTCGGCCTAATCGCTCTCCACGCTCATTCAAGGCCTGGCTTGCCTCAACAAATCAAACTCTaGCGAATCCCCATTAGGATC +
Preference number: 4 (lower is better)
Translates to: SPLLGLIALHAHSRPGLPQQIKL*RIPIRI
Trigger: GATCCTAATGGGGATTCGGCAGAGTTTGATTTGTTG...AGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCGAGCAGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp TATGGCGGGGCCGTCAAAGCATTGCGTCTGCTGCAACATTGTGCTTTTTGGCAAGCAGTTTCTGCAAACTaGTGGGCGCTGTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: YGGAVKALRLLQHCAFWQAVSAN*WALFFR
Trigger: CCTGAAGAACAGCGCCCAGCAGTTTGCAGAAACTGC...TTGCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGACGGCCCCGCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp AAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTTGTGGGGAGGCCTAGGTGCTGGTGATGGTTCATaGAAAAGATTACTATGCAAG +
Preference number: 4 (lower is better)
Translates to: KEGQGLLLRPSLLWGGLGAGDGS*KRLLCK
Trigger: CTTGCATAGTAATCTTTTGCATGAACCATCACCAGC...ACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTACATTCTCGGGGCCCATaGCATCGCGGGGACGGTGCG +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLHSRGP*HRGDGA
Trigger: CGCACCGTCCCCGCGATGGCATGGGCCCCGAGAATG...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR GCA 90 bp CAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTCCCCACGGGCAACAGTaGAGTAAGACCCTGTCACGA +
Preference number: 4 (lower is better)
Translates to: QGKVSRSVSAIVVHFPEVPHGQQ*SKTLSR
Trigger: TCGTGACAGGGTCTTACTGCACTGTTGCCCGTGGGG...AACCTCAGGAAAGTGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp CGGCCTAATCGCTCTCCACGCTCATTCAAGGCCTGGCTTGCCTTCTGCACTGCGACTACTATTCCATATTaGTTTCCCAATTGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: RPNRSPRSFKAWLAFCTATTIPY*FPNCLA
Trigger: TGCGAGGCAATTGGGAAAGCAATATGGAATAGTAGT...CGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp AATGAGATGACAAGACAGCGCTGTGCAAAGGGGATGCAGGAAGAGAAGGCAGGAGGGCCGTCAAAGCATTaGGTCTGCTGCAACATTGTG +
Preference number: 4 (lower is better)
Translates to: NEMTRQRCAKGMQEEKAGGPSKH*VCCNIV
Trigger: CACAATGTTGCAGCAGACGCAATGCTTTGACGGCCC...TCCTGCCTTCTCTTCCTGCATCCCCTTTGCACAGCGCTGTCTTGTCATCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATGCTCAGTGCCGCCGTaGGCGAGCCCGAGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISCSVPP*ASPSAL
Trigger: CAGGGCGCTCGGGCTCGCCCACGGCGGCACTGAGCA...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323944.9
CDS-3UTR CCA 90 bp GGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTCATCGATACCATTAACCTaGCGAAGCTGCTCGAGCATC +
Preference number: 4 (lower is better)
Translates to: GLYKGVPNSPAGVRHPYSSIPLT*RSCSSI
Trigger: GATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGA...TGAATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp CGAATCCCCATTAGGATCGATACCATTAACCTGGCGAAGCTGCTCGAGCATCCACTCTGGCAGGTATGGTaGAGGATCTGGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RIPIRIDTINLAKLLEHPLWQVW*RIWKKV
Trigger: CACCTTCTTCCAGATCCTCCACCATACCTGCCAGAG...TGGATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGATCCTAATGGGGATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp ATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGATTCATAGGCACACATCCCAGCGCTCATTCAAGGCCTaGCTTGCCTTCTGCACTGCG +
Preference number: 4 (lower is better)
Translates to: ICLLGILPVPVIHRHTSQRSFKA*LAFCTA
Trigger: CGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCG...CTGGGATGTGTGCCTATGAATCACTGGCACTGGCAGTATTCCTAACAAGCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp CTCTGGCTTCCTGTCCGTGAGGTACCTCTGGCAGGTATGGTGGAGGATCTGGAACTTTCCCTTTGGGTTTaGGAGGCACAAAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: LWLPVREVPLAGMVEDLELSLWV*EAQNLL
Trigger: GAGAAGATTTTGTGCCTCCCAAACCCAAAGGGAAAG...TTCCAGATCCTCCACCATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp CAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTCACGCTGTCAGCAGCTaGATGGAGGATGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: QGKVSRSVSAIVVHFPEVHAVSS*MEDAVS
Trigger: GGAAACAGCATCCTCCATTCAGCTGCTGACAGCGTG...AACCTCAGGAAAGTGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp GGACAGCAAAGAACTTCACATGTGTTATCACTGGGCTCCTCTGCAAGAGGCTGGGGCTTACAATGTGTCTaGGATGTGCAGCTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GQQRTSHVLSLGSSARGWGLQCV*DVQLVS
Trigger: GGAGACAAGCTGCACATCTCAGACACATTGTAAGCC...CCAGCCTCTTGCAGAGGAGCCCAGTGATAACACATGTGAAGTTCTTTGCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp AAGGAGGGGCAGGGATTGCTGTTACGGCCCTCTCTGTTGTGGGGAGGCCTAGGTCATCTAAAAGGATTCTaGAATCTGTCTCCGACAAAT +
Preference number: 4 (lower is better)
Translates to: KEGQGLLLRPSLLWGGLGHLKGF*NLSPTN
Trigger: ATTTGTCGGAGACAGATTTCAGAATCCTTTTAGATG...ACCTAGGCCTCCCCACAACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGGCCCGGCGGTGTTGGTaGGGCTCGATGCCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRARRCW*GSMPAC
Trigger: GCACGCCGGCATCGAGCCTCACCAACACCGCCGGGC...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR TCA 90 bp TATGGCGGGGCCGTCAAAGCATTGCGTCTGCTGCAACATTGTGCTTTTTGGCAACTGCAAGTCTGGCCATaGCACTCTCTCACTCTCATA +
Preference number: 4 (lower is better)
Translates to: YGGAVKALRLLQHCAFWQLQVWP*HSLTLI
Trigger: TATGAGAGTGAGAGAGTGTCATGGCCAGACTTGCAG...TTGCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGACGGCCCCGCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp GGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTCAGCTTGTCCAGTAAAATaGCAGCTTCATGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GLYKGVPNSPAGVRHPYSACPVK*QLHGQP
Trigger: AGGCTGACCATGAAGCTGTCATTTTACTGGACAAGC...TGAATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCACCGCCCGCCGCCGAGTaGGAGCGCCTGCGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISPPAAE*ERLRSK
Trigger: TTTGCTTCGCAGGCGCTCGCACTCGGCGGCGGGCGG...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323944.9
CDS-3UTR GCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCGCCCTGGGGGCAGGGTaGCGTGCCCGCCAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGALGAG*RARQKS
Trigger: GCTTTTCTGGCGGGCACGGCACCCTGCCCCCAGGGC...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR GCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTGGCTCGATGCCGGCGTaGACGGCAAGCGCGAATTCG +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLGSMPA*TASANS
Trigger: CGAATTCGCGCTTGCCGTGCACGCCGGCATCGAGCC...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR GCA 90 bp TCTCCTCTGCTCGGCCTAATCGCTCTCCACGCTCATTCAAGGCCTGGCTTGCCTTTCATTCAATATCACTaGATTGTCCTAACGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SPLLGLIALHAHSRPGLPFIQYH*IVLTLR
Trigger: CCTCAGCGTTAGGACAATGCAGTGATATTGAATGAA...AGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCGAGCAGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp ATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGATTCATAGGCACACATCCCAGGGGAGCTCTAGGAGCTaGCACCTGGCATTGCCATTT +
Preference number: 4 (lower is better)
Translates to: ICLLGILPVPVIHRHTSQGSSRS*HLALPF
Trigger: AAATGGCAATGCCAGGTGGCAGCTCCTAGAGCTCCC...CTGGGATGTGTGCCTATGAATCACTGGCACTGGCAGTATTCCTAACAAGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp CTCTGGCTTCCTGTCCGTGAGGTACCTCTGGCAGGTATGGTGGAGGATCTGGAATCTGCTGCAACATTGTaGTTTTTGGCAAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: LWLPVREVPLAGMVEDLESAATL*FLARES
Trigger: ACTTTCCCTTGCCAAAAAGCACAATGTTGCAGCAGA...TTCCAGATCCTCCACCATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp TTTAATGTGCACCATCTGATATTTTTACCCCCAGTAGACAAACTTTCTCTCTCCGTGAATCGTGCAGCCTaGCTCGCGCCCCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: FNVHHLIFLPPVDKLSLSVNRAA*LAPLPC
Trigger: GCACGGCAGGGGCGCGAGCCAGGCTGCACGATTCAC...GGAGAGAGAAAGTTTGTCTACTGGGGGTAAAAATATCAGATGGTGCACATTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000323944.9
CDS-3UTR CCA 90 bp TCCTTGAAGGAACTCGAAATGGGCCCCACGGGCAACAGTGCAGTAAGACCCTGTGTGCTGGCTACCCACTaGTCAAAAGCATTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SLKELEMGPTGNSAVRPCVLATH*SKAFSN
Trigger: GTTTGAAAATGCTTTTGACCAGTGGGTAGCCAGCAC...ACAGGGTCTTACTGCACTGTTGCCCGTGGGGCCCATTTCGAGTTCCTTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp ATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGATTCATAGGCACACATCCCAGTCCGTGAGGTACCTCTaGCAGGTATGGTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: ICLLGILPVPVIHRHTSQSVRYL*QVWWRI
Trigger: GATCCTCCACCATACCTGCCAGAGGTACCTCACGGA...CTGGGATGTGTGCCTATGAATCACTGGCACTGGCAGTATTCCTAACAAGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp CGAATCCCCATTAGGATCGATACCATTAACCTGGCGAAGCTGCTCGAGCATCCAGTTTCTGCAAACTGCTaGGCGCTGTTCTTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RIPIRIDTINLAKLLEHPVSANC*ALFFRS
Trigger: AGACCTGAAGAACAGCGCCCAGCAGTTTGCAGAAAC...TGGATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGATCCTAATGGGGATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTACGAGCTCCCCCACACTaGGAGCCTCGGGGCAGCATT +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLRAPPH*EPRGSI
Trigger: AATGCTGCCCCGAGGCTCCCAGTGTGGGGGAGCTCG...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR CCA 90 bp CTGGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTTCACTGCAGGAGTCCTaGAACAAGTTAGAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LDSTKVCQTLQLGFGTLISLQES*NKLEGQ
Trigger: TTGGCCTTCTAACTTGTTCCAGGACTCCTGCAGTGA...AATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 72 bp ATTTTCCCACTGGTCAAGCCAGAGACCCCTTTGCCTTaGGTGGCCGCATTAGTTTCTATCCTGATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: IFPLVKPETPLP*VAALVSILMGP
Trigger: AGGACCCATCAGGATAGAAACTAATGCGGCCACCAAAGGCAAAGGGGTCTCTGGCTTGACCAGTGGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 72 bp TATTCAACTGGGAGCTCTAGGAGCTGCCACCTGGCATaGCCATTTTCAGCTCAGGACTCTGCCATGTGTTCT +
Preference number: 4 (lower is better)
Translates to: YSTGSSRSCHLA*PFSAQDSAMCS
Trigger: AGAACACATGGCAGAGTCCTGAGCTGAAAATGGCAATGCCAGGTGGCAGCTCCTAGAGCTCCCAGTTGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp ATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGATTCATAGGCACACATCCCAGGAAGGTGCATTTTTCTaGCGCTGTGCTGGCTACCCA +
Preference number: 4 (lower is better)
Translates to: ICLLGILPVPVIHRHTSQEGAFF*RCAGYP
Trigger: TGGGTAGCCAGCACAGCGTCAGAAAAATGCACCTTC...CTGGGATGTGTGCCTATGAATCACTGGCACTGGCAGTATTCCTAACAAGCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTCCGAGTGCGAGCGCCTaGGAAGCAAACCTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIPSASA*EANLPA
Trigger: CGCGGGCAGGTTTGCTTCGCAGGCGCTCGCACTCGG...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323944.9
CDS-3UTR GCA 90 bp AATGAGATGACAAGACAGCGCTGTGCAAAGGGGATGCAGGAAGAGAAGGCAGGAGGATCTGGAAGAAGGTaGATTTTTCTGACGCTGTGC +
Preference number: 4 (lower is better)
Translates to: NEMTRQRCAKGMQEEKAGGSGRR*IFLTLC
Trigger: GCACAGCGTCAGAAAAATGCACCTTCTTCCAGATCC...TCCTGCCTTCTCTTCCTGCATCCCCTTTGCACAGCGCTGTCTTGTCATCTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTGCCTGGCTTGCCTTCTaGACTGCGCTGGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLAWLAF*TALVTL
Trigger: CAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCAGGC...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR GCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAGCCTGGCTTGCCTTCTaGACTGCGCTGGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLAWLAF*TALVTL
Trigger: CAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCAGGC...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR GCA 90 bp GGACAGCAAAGAACTTCACATGTGTTATCACTGGGCTCCTCTGCAAGAGGCTGGTTCATGGCAAGCTTGTaGGCAGTTTCTGCAAACTGC +
Preference number: 4 (lower is better)
Translates to: GQQRTSHVLSLGSSARGWFMASL*AVSANC
Trigger: GCAGTTTGCAGAAACTGCGCACAAGCTTGCCATGAA...CCAGCCTCTTGCAGAGGAGCCCAGTGATAACACATGTGAAGTTCTTTGCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTACGGCTTGCCCAATACTaGCCGCACAACGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLRLAQY*PHNGSQ
Trigger: CTGGGACCCGTTGTGCGGGCAGTATTGGGCAAGCCG...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR GCA 90 bp ACATCCCAGTTTCACACAACTGCAAGTCTGGCCATGACACTCTCTCACTCTCATGACTCTACAAAGGTGTaGCAAACTCTCCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TSQFHTTASLAMTLSHSHDSTKV*QTLQLG
Trigger: CCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTC...ATGAGAGTGAGAGAGTGTCATGGCCAGACTTGCAGTTGTGTGAAACTGGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp TGCTCGAGCATCCACTGTGATCTCCGAACAAATGATGTGGAGCCTTCAAACTGTTTGCACCTGGGTCACTaGAGGAGTCCTGGAACAAGT +
Preference number: 4 (lower is better)
Translates to: CSSIHCDLRTNDVEPSNCLHLGH*RSPGTS
Trigger: ACTTGTTCCAGGACTCCTGCAGTGACCCAGGTGCAA...ACAGTTTGAAGGCTCCACATCATTTGTTCGGAGATCACAGTGGATGCTCGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp ACATCCCAGTTTCACACAACTGCAAGTCTGGCCATGACACTCTCTCACTCTCATCTGTCAGCAGCTGAATaGAGGATGCTGTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TSQFHTTASLAMTLSHSHLSAAE*RMLFPP
Trigger: GGGAGGAAACAGCATCCTCCATTCAGCTGCTGACAG...ATGAGAGTGAGAGAGTGTCATGGCCAGACTTGCAGTTGTGTGAAACTGGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTCCTTCTGCACTGCGCTaGTCACGCTGTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTPSALR*SRCQQL
Trigger: CAGCTGCTGACAGCGTGACCAGCGCAGTGCAGAAGG...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTGCCTGCCTACTCCCCTaGCCTCACAGCCACCCGCCT +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIACLLP*PHSHPP
Trigger: AGGCGGGTGGCTGTGAGGCCAGGGGAGTAGGCAGGC...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR CCA 90 bp TTCCCTGTCCCTGTGTTGAGGATCCTCAATCACCAGTATCAATTCTCCAATCCCCTAGGAGCTGCCACCTaGCATTGCCATTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: FPVPVLRILNHQYQFSNPLGAAT*HCHFQL
Trigger: GAGCTGAAAATGGCAATGCCAGGTGGCAGCTCCTAG...GGGATTGGAGAATTGATACTGGTGATTGAGGATCCTCAACACAGGGACAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCCGGGAGGCAGAGGCTaGAGTGAGCTGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLPGGRG*SELRSR
Trigger: GCGTGATCTCAGCTCACTCCAGCCTCTGCCTCCCGG...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550887.5
3UTR CAA 72 bp ACTATTCCATATTGCTTTCCCAATTGCCTCGCAAACTaGGCCACAGTATCAGGGAAACAGGGCTACCAGGGC +
Preference number: 4 (lower is better)
Translates to: TIPYCFPNCLAN*ATVSGKQGYQG
Trigger: GCCCTGGTAGCCCTGTTTCCCTGATACTGTGGCCAAGTTTGCGAGGCAATTGGGAAAGCAATATGGAATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp CCCACTGGTCAAGCCAGAGACCCCTTTGCCTTTGGTGGCCGCATTAGTTTCTATGTTAAATATTCGCCTTaGCCTCCAGTTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: PTGQARDPFAFGGRISFYVKYSP*PPVAKK
Trigger: TTTCTTGGCAACTGGAGGTCAAGGCGAATATTTAAC...ATAGAAACTAATGCGGCCACCAAAGGCAAAGGGGTCTCTGGCTTGACCAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp ATGACAGTGACAAGAGAAACATCTGTGAGTACACAGAGGGTTTTAGGTAGGCTTCTGGCTTCCTGTCCGTaGGGTACCTCTGGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: MTVTRETSVSTQRVLGRLLASCP*GTSGRY
Trigger: ATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAG...AAGCCTACCTAAAACCCTCTGTGTACTCACAGATGTTTCTCTTGTCACTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTGGAACCTGGCGCCCTTaGCCAAGCCTGAGATCGGAA +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLGTWRP*PSLRSE
Trigger: TTCCGATCTCAGGCTTGGTCAAGGGCGCCAGGTTCC...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR TCA 90 bp GGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTCACCTTTGAAGCTGACTTaGTATCTGACAGGCAGATAT +
Preference number: 4 (lower is better)
Translates to: GLYKGVPNSPAGVRHPYSPLKLT*YLTGRY
Trigger: ATATCTGCCTGTCAGATATCAAGTCAGCTTCAAAGG...TGAATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp CAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTCTAGCCAATTCTCCTTaGAGGAACTCGAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: QGKVSRSVSAIVVHFPEVLANSP*RNSKWA
Trigger: GGCCCATTTCGAGTTCCTTCAAGGAGAATTGGCTAG...AACCTCAGGAAAGTGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp GTGTTTCTGTTAAAGCCAGTTATTTTCTTCCCCGAAAGGTCACCTTGTGCGCAGCTATCCGTCTCCCACTaGAATCACGGAAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VFLLKPVIFFPERSPCAQLSVSH*NHGSCC
Trigger: ACAGCAGCTTCCGTGATTTCAGTGGGAGACGGATAG...CTGCGCACAAGGTGACCTTTCGGGGAAGAAAATAACTGGCTTTAACAGAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp CGAATCCCCATTAGGATCGATACCATTAACCTGGCGAAGCTGCTCGAGCATCCACTGTGTGGGAAGACATaGAAGAAAAATGCCTGTACC +
Preference number: 4 (lower is better)
Translates to: RIPIRIDTINLAKLLEHPLCGKT*KKNACT
Trigger: GGTACAGGCATTTTTCTTTCATGTCTTCCCACACAG...TGGATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGATCCTAATGGGGATTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp TCCTTGAAGGAACTCGAAATGGGCCCCACGGGCAACAGTGCAGTAAGACCCTGTCACCAAGATGGTAAATaGCAGCGCTATATTCAAACA +
Preference number: 4 (lower is better)
Translates to: SLKELEMGPTGNSAVRPCHQDGK*QRYIQT
Trigger: TGTTTGAATATAGCGCTGTCATTTACCATCTTGGTG...ACAGGGTCTTACTGCACTGTTGCCCGTGGGGCCCATTTCGAGTTCCTTCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAAGGCAGAGGCTGGAGTaGGCTGAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLRQRLE*AEITPL
Trigger: CAGTGGCGTGATCTCAGCTCACTCCAGCCTCTGCCT...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550887.5
CDS-3UTR GCA 90 bp CCCACTGGTCAAGCCAGAGACCCCTTTGCCTTTGGTGGCCGCATTAGTTTCTATGCCTTGACCTCCAGTTaGCAAGAAAGGAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: PTGQARDPFAFGGRISFYALTSS*QERNLF
Trigger: AAAAAGATTCCTTTCTTGGCAACTGGAGGTCAAGGC...ATAGAAACTAATGCGGCCACCAAAGGCAAAGGGGTCTCTGGCTTGACCAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp CAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTTTAACCTGGCGAAGCTaGTCGAGCATCCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: QGKVSRSVSAIVVHFPEVLTWRS*SSIHCD
Trigger: ATCACAGTGGATGCTCGAGCAGCTTCGCCAGGTTAA...AACCTCAGGAAAGTGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAGCTTGCCTTCTGCACTaGGCTGGTCACGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLACLLH*AGHAVS
Trigger: GCTGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGC...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR GCA 90 bp AACCTCCAAAATCCAGATACCAAGAAACTAAAGGCCCTCTCCCAAGGACATTATAGGAGGGGCAGGGATTaGTGTTACGGCCCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: NLQNPDTKKLKALSQGHYRRGRD*CYGPLC
Trigger: ACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCT...ATAATGTCCTTGGGAGAGGGCCTTTAGTTTCTTGGTATCTGGATTTTGGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCAGTTGGTGAGGCTCGATaGCGGCGTGCACGGCAAGCG +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISVGEAR*RRARQA
Trigger: CGCTTGCCGTGCACGCCGGCATCGAGCCTCACCAAC...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR CCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTACCTTCTGCACTGCGCTaGTCACGCTGTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLPSALR*SRCQQL
Trigger: CAGCTGCTGACAGCGTGACCAGCGCAGTGCAGAAGG...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR CCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAGCGCCCCAACAGCCGTaGCGGCTGCAACCGCATCTC +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKAPQQP*RLQPHL
Trigger: GAGATGCGGTTGCAGCCGCCACGGCTGTTGGGGCGC...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR CCA 90 bp AATGAGATGACAAGACAGCGCTGTGCAAAGGGGATGCAGGAAGAGAAGGCAGGATCACCGCAACTCAGCTaGGAATATTCTTCTCATTGC +
Preference number: 4 (lower is better)
Translates to: NEMTRQRCAKGMQEEKAGSPQLS*EYSSHC
Trigger: GCAATGAGAAGAATATTCCCAGCTGAGTTGCGGTGA...TCCTGCCTTCTCTTCCTGCATCCCCTTTGCACAGCGCTGTCTTGTCATCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp TCCTCTACCCAACTCAACAACTTAAATGTTTCCCCAGATTTCCACTATCCGTCTAGCAATCTGAGGCTCTaGCCTCCAGCAGGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SSTQLNNLNVSPDFHYPSSNLRL*PPAGLS
Trigger: AGACAGCCCTGCTGGAGGCCAGAGCCTCAGATTGCT...AGACGGATAGTGGAAATCTGGGGAAACATTTAAGTTGTTGAGTTGGGTAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp GGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTCACAACATTGTGCTTTTTaGCAAGGGAAAGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GLYKGVPNSPAGVRHPYSQHCAF*QGKVSR
Trigger: TCTGCTCACTTTCCCTTGCCAAAAAGCACAATGTTG...TGAATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTGTTGTCCCAGCTACTTaGGAGGCTGAGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLVVPAT*EAEAGG
Trigger: CCCACCTGCCTCAGCCTCCCAAGTAGCTGGGACAAC...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550887.5
3UTR CAA 72 bp CTGTCTGCATTTTCAGATAGATCTAGCCAATTCTCCTaGAAGGAACTCGAAATGGGCCCCACGGGCAACAGT +
Preference number: 4 (lower is better)
Translates to: LSAFSDRSSQFS*KELEMGPTGNS
Trigger: ACTGTTGCCCGTGGGGCCCATTTCGAGTTCCTTCAAGGAGAATTGGCTAGATCTATCTGAAAATGCAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp GGACAGCAAAGAACTTCACATGTGTTATCACTGGGCTCCTCTGCAAGAGGCTGGTTCACAGTATGCTTATaGCCTCATCCTCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: GQQRTSHVLSLGSSARGWFTVCL*PHPQLL
Trigger: AAGTAGCTGAGGATGAGGTCATAAGCATACTGTGAA...CCAGCCTCTTGCAGAGGAGCCCAGTGATAACACATGTGAAGTTCTTTGCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp GGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTCATTATCAGTGCACTATTaGTTGCTCTATTCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GLYKGVPNSPAGVRHPYSLSVHY*LLYSVW
Trigger: CCACACAGAATAGAGCAATCAATAGTGCACTGATAA...TGAATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp CAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTTTTGGCAAGGGAAAGTaGGCAGATCTGTTTCTGCGA +
Preference number: 4 (lower is better)
Translates to: QGKVSRSVSAIVVHFPEVFGKGK*ADLFLR
Trigger: TCGCAGAAACAGATCTGCTCACTTTCCCTTGCCAAA...AACCTCAGGAAAGTGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp GGACAGCAAAGAACTTCACATGTGTTATCACTGGGCTCCTCTGCAAGAGGCTGGGCCTTGACCTCCAGTTaGCAAGAAAGGAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: GQQRTSHVLSLGSSARGWALTSS*QERNLF
Trigger: AAAAAGATTCCTTTCTTGGCAACTGGAGGTCAAGGC...CCAGCCTCTTGCAGAGGAGCCCAGTGATAACACATGTGAAGTTCTTTGCTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp ACATCCCAGTTTCACACAACTGCAAGTCTGGCCATGACACTCTCTCACTCTCATATTTTTCTGACGCTGTaGTGGCTACCCACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: TSQFHTTASLAMTLSHSHIFLTL*WLPTGQ
Trigger: TTGACCAGTGGGTAGCCAGCACAGCGTCAGAAAAAT...ATGAGAGTGAGAGAGTGTCATGGCCAGACTTGCAGTTGTGTGAAACTGGGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTGCCTGGCTTGCCTTCTaGACTGCGCTGGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIAWLAF*TALVTL
Trigger: CAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCAGGC...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp GGTAGGCTTACAATGTGTCTGAGATGTGCAGCTTGTCTCCTAGTTTCACAAAAAATTCAAGGCCTGGCTTaGCTTCTGCACTGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GRLTMCLRCAACLLVSQKIQGLA*LLHCAG
Trigger: ACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAAT...TTTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGACACATTGTAAGCCTACC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp GGACAGCAAAGAACTTCACATGTGTTATCACTGGGCTCCTCTGCAAGAGGCTGGCAGGCAAGGTGCAATTaGCATGAAATGCAATTTGTC +
Preference number: 4 (lower is better)
Translates to: GQQRTSHVLSLGSSARGWQARCN*HEMQFV
Trigger: GACAAATTGCATTTCATGGCAATTGCACCTTGCCTG...CCAGCCTCTTGCAGAGGAGCCCAGTGATAACACATGTGAAGTTCTTTGCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTAACAGCCGTGGCGGCTaGAACCGCATCTCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: FHLGKITSDVTTLKCLPANSRGG*NRISRA
Trigger: AGCCCGGGAGATGCGGTTGCAGCCGCCACGGCTGTT...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR CCA 90 bp GGTAGGCTTACAATGTGTCTGAGATGTGCAGCTTGTCTCCTAGTTTCACAAAAATCCGTGAGGTACCTCTaGCAGGTATGGTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: GRLTMCLRCAACLLVSQKSVRYL*QVWWRI
Trigger: GATCCTCCACCATACCTGCCAGAGGTACCTCACGGA...TTTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGACACATTGTAAGCCTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTACGCTCATTCAAGGCCTaGCTTGCCTTCTGCACTGCG +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLRSFKA*LAFCTA
Trigger: CGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCG...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR CCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCGCTCATTCAAGGCCTaGCTTGCCTTCTGCACTGCG +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLRSFKA*LAFCTA
Trigger: CGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCG...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR CCA 90 bp GGACAGCAAAGAACTTCACATGTGTTATCACTGGGCTCCTCTGCAAGAGGCTGGAACATTTGTGCTTCATaGCAAGCTTGTGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GQQRTSHVLSLGSSARGWNICAS*QACAQF
Trigger: AAACTGCGCACAAGCTTGCCATGAAGCACAAATGTT...CCAGCCTCTTGCAGAGGAGCCCAGTGATAACACATGTGAAGTTCTTTGCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTACGCCACCCGCCAACTTaGAAGAATCTCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLRHPPT*KNLSGS
Trigger: GCTCCCAGAGAGATTCTTCCAAGTTGGCGGGTGGCG...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR TCA 90 bp GGTAGGCTTACAATGTGTCTGAGATGTGCAGCTTGTCTCCTAGTTTCACAAAAAGAAGGTGCATTTTTCTaGCGCTGTGCTGGCTACCCA +
Preference number: 4 (lower is better)
Translates to: GRLTMCLRCAACLLVSQKEGAFF*RCAGYP
Trigger: TGGGTAGCCAGCACAGCGTCAGAAAAATGCACCTTC...TTTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGACACATTGTAAGCCTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCACGCTGTCAGCAGCTaGATGGAGGATGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLHAVSS*MEDAVS
Trigger: GGAAACAGCATCCTCCATTCAGCTGCTGACAGCGTG...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR TCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTACACGCTGTCAGCAGCTaGATGGAGGATGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLHAVSS*MEDAVS
Trigger: GGAAACAGCATCCTCCATTCAGCTGCTGACAGCGTG...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR TCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGACTCCGGCAGGGTaGGTATCCTGTAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLQTPAG*VSCKRK
Trigger: CTTCCTCTTACAGGATACTCACCCTGCCGGAGTCTG...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548369.1
CDS-3UTR GCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTGCTTGCCTTCTGCACTaGGCTGGTCACGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIACLLH*AGHAVS
Trigger: GCTGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGC...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGGCCTGGCTTGCCTTCTaGACTGCGCTGGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRAWLAF*TALVTL
Trigger: CAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCAGGC...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAATTCAAGGCCTGGCTTaGCTTCTGCACTGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLIQGLA*LLHCAG
Trigger: ACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAAT...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR GCA 90 bp AACCTCCAAAATCCAGATACCAAGAAACTAAAGGCCCTCTCCCAAGGACATTATCTTGTGCGCAGTTTCTaGAAACTGCTGGGCGCTGTT +
Preference number: 4 (lower is better)
Translates to: NLQNPDTKKLKALSQGHYLVRSF*KLLGAV
Trigger: AACAGCGCCCAGCAGTTTGCAGAAACTGCGCACAAG...ATAATGTCCTTGGGAGAGGGCCTTTAGTTTCTTGGTATCTGGATTTTGGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTCTACTCCAGCCACGTTaGCCGGCGGTGTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FHLGKITSDVTTLKCLPALLQPR*PAVLVR
Trigger: CCTCACCAACACCGCCGGGCAACGTGGCTGGAGTAG...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR GCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAGAAGGCAGGTCACACTaGAGAAAGGCCGCTCGTCTA +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLEGRSH*RKAARL
Trigger: TAGACGAGCGGCCTTTCTGCAGTGTGACCTGCCTTC...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548369.1
CDS-3UTR GCA 90 bp GCCACCTTAGGAAGAGCAATTTTACAATCTTCCTTGGTAACCTGGTTCATGGTTGACAAGACAGCGCTGTaGAAAGGGGATGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: ATLGRAILQSSLVTWFMVDKTAL*KGDAGR
Trigger: TCTTCCTGCATCCCCTTTGCACAGCGCTGTCTTGTC...AACCATGAACCAGGTTACCAAGGAAGATTGTAAAATTGCTCTTCCTAAGGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp GGTAGGCTTACAATGTGTCTGAGATGTGCAGCTTGTCTCCTAGTTTCACAAAAAGTCCTCCTCTTGACTTaGACAGCTCCCAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: GRLTMCLRCAACLLVSQKVLLLT*TAPSIL
Trigger: AAGGATGCTGGGAGCTGTCCAAGTCAAGAGGAGGAC...TTTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGACACATTGTAAGCCTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp AACCTCCAAAATCCAGATACCAAGAAACTAAAGGCCCTCTCCCAAGGACATTATCTCTGGCAGGTATGGTaGAGGATCTGGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: NLQNPDTKKLKALSQGHYLWQVW*RIWKKV
Trigger: CACCTTCTTCCAGATCCTCCACCATACCTGCCAGAG...ATAATGTCCTTGGGAGAGGGCCTTTAGTTTCTTGGTATCTGGATTTTGGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTTCCGTGAGGTACCTCTaGCAGGTATGGTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLSVRYL*QVWWRI
Trigger: GATCCTCCACCATACCTGCCAGAGGTACCTCACGGA...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp TTCCCTGTCCCTGTGTTGAGGATCCTCAATCACCAGTATCAATTCTCCAATCCCGCAGTTAATAAACTCTaGCTTCCTGTCCGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: FPVPVLRILNHQYQFSNPAVNKL*LPVREV
Trigger: TACCTCACGGACAGGAAGCCAGAGTTTATTAACTGC...GGGATTGGAGAATTGATACTGGTGATTGAGGATCCTCAACACAGGGACAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp GGTAGGCTTACAATGTGTCTGAGATGTGCAGCTTGTCTCCTAGTTTCACAAAAACTGTCAGCAGCTGAATaGAGGATGCTGTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GRLTMCLRCAACLLVSQKLSAAE*RMLFPP
Trigger: GGGAGGAAACAGCATCCTCCATTCAGCTGCTGACAG...TTTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGACACATTGTAAGCCTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTCCTTCTGCACTGCGCTaGTCACGCTGTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIPSALR*SRCQQL
Trigger: CAGCTGCTGACAGCGTGACCAGCGCAGTGCAGAAGG...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCACCTTCTGCACTGCGCTaGTCACGCTGTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISPSALR*SRCQQL
Trigger: CAGCTGCTGACAGCGTGACCAGCGCAGTGCAGAAGG...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp TGCTCGAGCATCCACTGTGATCTCCGAACAAATGATGTGGAGCCTTCAAACTGTCATAAATTTTCCCACTaGTCAAGCCAGAGACCCCTT +
Preference number: 4 (lower is better)
Translates to: CSSIHCDLRTNDVEPSNCHKFSH*SSQRPL
Trigger: AAGGGGTCTCTGGCTTGACCAGTGGGAAAATTTATG...ACAGTTTGAAGGCTCCACATCATTTGTTCGGAGATCACAGTGGATGCTCGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp GACAGCGCTATATTCAAACACAAGATGTTAACTACTATTCCATATTGCTTTCCCCCAGGCTCACCAGAGTaGAGGTGGGGGAGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: DSAIFKHKMLTTIPYCFPPGSPE*RWGSQS
Trigger: AGACTGACTCCCCCACCTCCACTCTGGTGAGCCTGG...GGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATATAGCGCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 72 bp GATCTCCGAACAAATGATGTGGAGCCTTCAAACTGTTaGACCTTTGTGATGGACGCCTGTGTGGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: DLRTNDVEPSNC*TFVMDACVGFL
Trigger: CAAGAAACCCACACAGGCGTCCATCACAAAGGTCAAACAGTTTGAAGGCTCCACATCATTTGTTCGGAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 72 bp TTTCTGCGATTGTGGTGCACTTTCCTGAGGTTAACTTaGCATGAAGCCCGGAGCTCAAGAAAGGACCACATT +
Preference number: 4 (lower is better)
Translates to: FLRLWCTFLRLT*HEARSSRKDHI
Trigger: AATGTGGTCCTTTCTTGAGCTCCGGGCTTCATGCAAAGTTAACCTCAGGAAAGTGCACCACAATCGCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCACTGGCTTCCTGTCCGTaGGGTACCTCTGGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISLASCP*GTSGRY
Trigger: ATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAG...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR TCA 90 bp GCTTTGAACTCATTCAATTCTCTGAACACTCTAGTACGTAGGTACTATTCTCATCTGGCTTCCTGTCCGTaGGGTACCTCTGGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: ALNSFNSLNTLVRRYYSHLASCP*GTSGRY
Trigger: ATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAG...ATGAGAATAGTACCTACGTACTAGAGTGTTCAGAGAATTGAATGAGTTCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTCTGGCTTCCTGTCCGTaGGGTACCTCTGGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHILASCP*GTSGRY
Trigger: ATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAG...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR TCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAGCCCTTGACCAAGCCTaGGATCGGAAAGGGGGCATC +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKALDQA*DRKGGI
Trigger: GATGCCCCCTTTCCGATCTCAGGCTTGGTCAAGGGC...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR GCA 90 bp AACCTCCAAAATCCAGATACCAAGAAACTAAAGGCCCTCTCCCAAGGACATTATTTAACCTGGCGAAGCTaGTCGAGCATCCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: NLQNPDTKKLKALSQGHYLTWRS*SSIHCD
Trigger: ATCACAGTGGATGCTCGAGCAGCTTCGCCAGGTTAA...ATAATGTCCTTGGGAGAGGGCCTTTAGTTTCTTGGTATCTGGATTTTGGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAGCTTGCCTTCTGCACTaGGCTGGTCACGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKACLLH*AGHAVS
Trigger: GCTGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGC...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGGCTTGCCTTCTGCACTaGGCTGGTCACGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRACLLH*AGHAVS
Trigger: GCTGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGC...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTGCAGTTTCTGCAAACTaGTGGGCGCTGTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLAVSAN*WALFFR
Trigger: CCTGAAGAACAGCGCCCAGCAGTTTGCAGAAACTGC...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR GCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAGCAGTTTCTGCAAACTaGTGGGCGCTGTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLAVSAN*WALFFR
Trigger: CCTGAAGAACAGCGCCCAGCAGTTTGCAGAAACTGC...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR GCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCTTGTGCGCAGTTTCTaGAAACTGCTGGGCGCTGTT +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLLVRSF*KLLGAV
Trigger: AACAGCGCCCAGCAGTTTGCAGAAACTGCGCACAAG...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR GCA 90 bp GAGAAGTGCAGAAATGAAACAAATGAAATGTCTTCTGACAAGCTCAACCAAACTAGGAGGGGCAGGGATTaGTGTTACGGCCCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: EKCRNETNEMSSDKLNQTRRGRD*CYGPLC
Trigger: ACAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCT...AGTTTGGTTGAGCTTGTCAGAAGACATTTCATTTGTTTCATTTCTGCACTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTATCTCTCTGGGAGCCTaGCTACTCCCCTGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: FHLGKITSDVTTLKCLPAISLGA*LLPWPH
Trigger: GTGAGGCCAGGGGAGTAGGCAGGCTCCCAGAGAGAT...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR GCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGACACGAGTCCCTCTCTaGGCGCACAAAGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRTRVPL*AHKAAA
Trigger: CGCAGCTGCTTTGTGCGCGCAGAGAGGGACTCGTGT...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR GCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCCTCCGTTCTGCGGCTTaGCCAATACTGCCCGCACAA +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGLRSAA*PILPAQ
Trigger: TTGTGCGGGCAGTATTGGGCAAGCCGCAGAACGGAG...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR CCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAGTCCTCCTCTTGACTTaGACAGCTCCCAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLVLLLT*TAPSIL
Trigger: AAGGATGCTGGGAGCTGTCCAAGTCAAGAGGAGGAC...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTACTCTGGCAGGTATGGTaGAGGATCTGGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLLWQVW*RIWKKV
Trigger: CACCTTCTTCCAGATCCTCCACCATACCTGCCAGAG...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCTGTCAGCAGCTGAATaGAGGATGCTGTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLLSAAE*RMLFPP
Trigger: GGGAGGAAACAGCATCCTCCATTCAGCTGCTGACAG...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTACTGTCAGCAGCTGAATaGAGGATGCTGTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLLSAAE*RMLFPP
Trigger: GGGAGGAAACAGCATCCTCCATTCAGCTGCTGACAG...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTGTTTCTGCAAACTGCTaGGCGCTGTTCTTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTVSANC*ALFFRS
Trigger: AGACCTGAAGAACAGCGCCCAGCAGTTTGCAGAAAC...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp GGTAGGCTTACAATGTGTCTGAGATGTGCAGCTTGTCTCCTAGTTTCACAAAAAGTTTCTGCAAACTGCTaGGCGCTGTTCTTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GRLTMCLRCAACLLVSQKVSANC*ALFFRS
Trigger: AGACCTGAAGAACAGCGCCCAGCAGTTTGCAGAAAC...TTTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGACACATTGTAAGCCTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCGGCCCTCTCTGTTGTaGGGAGGCCTAGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRRPSLL*GGLGRT
Trigger: AGTCCTACCTAGGCCTCCCCACAACAGAGAGGGCCG...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp ATGACAGTGACAAGAGAAACATCTGTGAGTACACAGAGGGTTTTAGGTAGGCTTCACATGTGTTATCACTaGGCTCCTCTGCAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: MTVTRETSVSTQRVLGRLHMCYH*APLQEA
Trigger: AGCCTCTTGCAGAGGAGCCCAGTGATAACACATGTG...AAGCCTACCTAAAACCCTCTGTGTACTCACAGATGTTTCTCTTGTCACTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTTTGGAAGAATCTCTCTaGGAGCCTGCCTACTCCCCT +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLLEESL*EPAYSP
Trigger: AGGGGAGTAGGCAGGCTCCCAGAGAGATTCTTCCAA...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR CCA 90 bp ACCTGGGTCACTGCAGGAGTCCTGGAACAAGTTAGAAGGCCAAGTTATTTTCTACTGTTTCTGCGATTGTaGTGCACTTTCCTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: TWVTAGVLEQVRRPSYFLLFLRL*CTFLRL
Trigger: TAACCTCAGGAAAGTGCACCACAATCGCAGAAACAG...TAGAAAATAACTTGGCCTTCTAACTTGTTCCAGGACTCCTGCAGTGACCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAACTGGCTTCCTGTCCGTaGGGTACCTCTGGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKLASCP*GTSGRY
Trigger: ATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAG...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR TCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCCACGCTGTCAGCAGCTaGATGGAGGATGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGHAVSS*MEDAVS
Trigger: GGAAACAGCATCCTCCATTCAGCTGCTGACAGCGTG...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR TCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTCACGCTGTCAGCAGCTaGATGGAGGATGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIHAVSS*MEDAVS
Trigger: GGAAACAGCATCCTCCATTCAGCTGCTGACAGCGTG...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR TCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTGGCTTACAATGTGTCTaGGATGTGCAGCTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLGLQCV*DVQLVS
Trigger: GGAGACAAGCTGCACATCTCAGACACATTGTAAGCC...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCTCGCGAAGATCGGAGTaGTTCGCGGATTTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGSRRSE*FADFCA
Trigger: AGCGCAGAAATCCGCGAATCACTCCGATCTTCGCGA...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR TCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTAGCAAGAACACCCACTaGCTGCAGGACCTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLSKNTH*LQDLGK
Trigger: TTTTCCTAGGTCCTGCAGTCAGTGGGTGTTCTTGCT...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548369.1
CDS-3UTR TCA 90 bp TCCTCTACCCAACTCAACAACTTAAATGTTTCCCCAGATTTCCACTATCCGTCTTCATCTGAGGATGTCTaGGTGTGGGTAATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SSTQLNNLNVSPDFHYPSSSEDV*VWVMLL
Trigger: CAAGAGCATTACCCACACTCAGACATCCTCAGATGA...AGACGGATAGTGGAAATCTGGGGAAACATTTAAGTTGTTGAGTTGGGTAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp GCCACCTTAGGAAGAGCAATTTTACAATCTTCCTTGGTAACCTGGTTCATGGTTGCAAGAAATGTCATCTaGGGATGTCTGAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: ATLGRAILQSSLVTWFMVARNVI*GCLSVG
Trigger: ACCCACACTCAGACATCCTCAGATGACATTTCTTGC...AACCATGAACCAGGTTACCAAGGAAGATTGTAAAATTGCTCTTCCTAAGGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGGAGGCTGGAGTGAGCTaGGATCACGCCACTGCACTA +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRREAGVS*DHATAL
Trigger: TAGTGCAGTGGCGTGATCTCAGCTCACTCCAGCCTC...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550887.5
CDS-3UTR GCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTTTAACCTGGCGAAGCTaGTCGAGCATCCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLLTWRS*SSIHCD
Trigger: ATCACAGTGGATGCTCGAGCAGCTTCGCCAGGTTAA...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTATTAACCTGGCGAAGCTaGTCGAGCATCCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLLTWRS*SSIHCD
Trigger: ATCACAGTGGATGCTCGAGCAGCTTCGCCAGGTTAA...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AACCTCCAAAATCCAGATACCAAGAAACTAAAGGCCCTCTCCCAAGGACATTATGGATCTGGAAGAAGGTaGATTTTTCTGACGCTGTGC +
Preference number: 4 (lower is better)
Translates to: NLQNPDTKKLKALSQGHYGSGRR*IFLTLC
Trigger: GCACAGCGTCAGAAAAATGCACCTTCTTCCAGATCC...ATAATGTCCTTGGGAGAGGGCCTTTAGTTTCTTGGTATCTGGATTTTGGAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCATTCAAGGCCTGGCTTaGCTTCTGCACTGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGIQGLA*LLHCAG
Trigger: ACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAAT...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTATTCAAGGCCTGGCTTaGCTTCTGCACTGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIIQGLA*LLHCAG
Trigger: ACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAAT...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTGAAATCGCTCCGTTCTaGGGCTTGCCCAATACTGCC +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIEIAPF*GLPNTA
Trigger: GGCAGTATTGGGCAAGCCGCAGAACGGAGCGATTTC...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR GCA 90 bp ATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGATTCATAGGCACACATCCCAGTTGAAGTCAGGGTTGTaGAAAAGTGATCCATTGACT +
Preference number: 4 (lower is better)
Translates to: ICLLGILPVPVIHRHTSQLKSGL*KSDPLT
Trigger: AGTCAATGGATCACTTTTGCACAACCCTGACTTCAA...CTGGGATGTGTGCCTATGAATCACTGGCACTGGCAGTATTCCTAACAAGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp ACACCTTATCTAAAGAGGTCAATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGAAGCATTGCGTCTGCTaGAACATTGTGCTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: TPYLKRSICLLGILPVPVKHCVC*NIVLFG
Trigger: GCCAAAAAGCACAATGTTGCAGCAGACGCAATGCTT...CACTGGCACTGGCAGTATTCCTAACAAGCAGATTGACCTCTTTAGATAAGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTTCGATACCATTAACCTaGCGAAGCTGCTCGAGCATC +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLSIPLT*RSCSSI
Trigger: GATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGA...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTTCCGTGAGGTACCTCTaGCAGGTATGGTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHISVRYL*QVWWRI
Trigger: GATCCTCCACCATACCTGCCAGAGGTACCTCACGGA...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCGCTCATTCAAGGCCTaGCTTGCCTTCTGCACTGCG +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRRSFKA*LAFCTA
Trigger: CGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCG...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTCGCTCATTCAAGGCCTaGCTTGCCTTCTGCACTGCG +
Preference number: 4 (lower is better)
Translates to: FHLGKITSDVTTLKCLPARSFKA*LAFCTA
Trigger: CGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCG...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
CDS-3UTR CCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAACGCTCATTCAAGGCCTaGCTTGCCTTCTGCACTGCG +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKRSFKA*LAFCTA
Trigger: CGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCG...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAGTTTCTGCAAACTGCTaGGCGCTGTTCTTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLVSANC*ALFFRS
Trigger: AGACCTGAAGAACAGCGCCCAGCAGTTTGCAGAAAC...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR CCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTGTTTCTGCAAACTGCTaGGCGCTGTTCTTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLVSANC*ALFFRS
Trigger: AGACCTGAAGAACAGCGCCCAGCAGTTTGCAGAAAC...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR CCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCACATGTGTTATCACTaGGCTCCTCTGCAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLHMCYH*APLQEA
Trigger: AGCCTCTTGCAGAGGAGCCCAGTGATAACACATGTG...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGAACGGGTCCCAGGGTTaGAGAGAACCAGGGACACGA +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRNGSQG*REPGTR
Trigger: TCGTGTCCCTGGTTCTCTCCAACCCTGGGACCCGTT...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR CCA 90 bp GCTTTGAACTCATTCAATTCTCTGAACACTCTAGTACGTAGGTACTATTCTCATGCCAAACTCTCCAGCTaGGGTTCGGCACCCTTATTC +
Preference number: 4 (lower is better)
Translates to: ALNSFNSLNTLVRRYYSHAKLSS*GSAPLF
Trigger: GAATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGC...ATGAGAATAGTACCTACGTACTAGAGTGTTCAGAGAATTGAATGAGTTCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTGAAGGTGCATTTTTCTaGCGCTGTGCTGGCTACCCA +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIEGAFF*RCAGYP
Trigger: TGGGTAGCCAGCACAGCGTCAGAAAAATGCACCTTC...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR TCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCGAAGGTGCATTTTTCTaGCGCTGTGCTGGCTACCCA +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGEGAFF*RCAGYP
Trigger: TGGGTAGCCAGCACAGCGTCAGAAAAATGCACCTTC...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR TCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCAGAAGGTGCATTTTTCTaGCGCTGTGCTGGCTACCCA +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISEGAFF*RCAGYP
Trigger: TGGGTAGCCAGCACAGCGTCAGAAAAATGCACCTTC...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR TCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTATTGATTGGGTTTGACTaGCGCACTTGCAGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLLIGFD*RTCSKN
Trigger: GTTCTTGCTGCAAGTGCGTCAGTCAAACCCAATCAA...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548369.1
CDS-3UTR TCA 90 bp GCTTTGAACTCATTCAATTCTCTGAACACTCTAGTACGTAGGTACTATTCTCATTATCAACATTTAGCATaGGGGCCCTCCCACACCCCT +
Preference number: 4 (lower is better)
Translates to: ALNSFNSLNTLVRRYYSHYQHLA*GPSHTP
Trigger: AGGGGTGTGGGAGGGCCCTCATGCTAAATGTTGATA...ATGAGAATAGTACCTACGTACTAGAGTGTTCAGAGAATTGAATGAGTTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp GACAGCGCTATATTCAAACACAAGATGTTAACTACTATTCCATATTGCTTTCCCTACTGCCAGTGCCAGTaGTTCATAGGCACACATCCC +
Preference number: 4 (lower is better)
Translates to: DSAIFKHKMLTTIPYCFPYCQCQ*FIGTHP
Trigger: GGGATGTGTGCCTATGAATCACTGGCACTGGCAGTA...GGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATATAGCGCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp TCCTCTACCCAACTCAACAACTTAAATGTTTCCCCAGATTTCCACTATCCGTCTAGCACCTGCGTATTTTaGAGTCAGGGTTGTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SSTQLNNLNVSPDFHYPSSTCVF*SQGCAK
Trigger: TTTTGCACAACCCTGACTTCAAAATACGCAGGTGCT...AGACGGATAGTGGAAATCTGGGGAAACATTTAAGTTGTTGAGTTGGGTAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTATTTTTCTGACGCTGTaGTGGCTACCCACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLIFLTL*WLPTGQ
Trigger: TTGACCAGTGGGTAGCCAGCACAGCGTCAGAAAAAT...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTATTCAAGGCCTGGCTTaGCTTCTGCACTGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: FHLGKITSDVTTLKCLPAIQGLA*LLHCAG
Trigger: ACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAAT...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
CDS-3UTR GCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAATTCAAGGCCTGGCTTaGCTTCTGCACTGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKIQGLA*LLHCAG
Trigger: ACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAAT...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCGCAGTTTCTGCAAACTaGTGGGCGCTGTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGAVSAN*WALFFR
Trigger: CCTGAAGAACAGCGCCCAGCAGTTTGCAGAAACTGC...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCAGCAGTTTCTGCAAACTaGTGGGCGCTGTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISAVSAN*WALFFR
Trigger: CCTGAAGAACAGCGCCCAGCAGTTTGCAGAAACTGC...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTGCAGTTTCTGCAAACTaGTGGGCGCTGTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIAVSAN*WALFFR
Trigger: CCTGAAGAACAGCGCCCAGCAGTTTGCAGAAACTGC...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp GCTTTGAACTCATTCAATTCTCTGAACACTCTAGTACGTAGGTACTATTCTCATCTTGTGCGCAGTTTCTaGAAACTGCTGGGCGCTGTT +
Preference number: 4 (lower is better)
Translates to: ALNSFNSLNTLVRRYYSHLVRSF*KLLGAV
Trigger: AACAGCGCCCAGCAGTTTGCAGAAACTGCGCACAAG...ATGAGAATAGTACCTACGTACTAGAGTGTTCAGAGAATTGAATGAGTTCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTCTTGTGCGCAGTTTCTaGAAACTGCTGGGCGCTGTT +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHILVRSF*KLLGAV
Trigger: AACAGCGCCCAGCAGTTTGCAGAAACTGCGCACAAG...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTTTCATGGCAAGCTTGTaGGCAGTTTCTGCAAACTGC +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLFMASL*AVSANC
Trigger: GCAGTTTGCAGAAACTGCGCACAAGCTTGCCATGAA...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR GCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTATTCATGGCAAGCTTGTaGGCAGTTTCTGCAAACTGC +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLFMASL*AVSANC
Trigger: GCAGTTTGCAGAAACTGCGCACAAGCTTGCCATGAA...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCAATCACTGGGCTCCTCTaGAAGAGGCTGGGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISITGLL*KRLGGK
Trigger: TTTACCTCCCAGCCTCTTGCAGAGGAGCCCAGTGAT...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTACAGCTGAATGGAGGATaGTGTTTCCTGAAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLQLNGG*CFLKGG
Trigger: TCCTCCTTTCAGGAAACAGCATCCTCCATTCAGCTG...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548369.1
CDS-3UTR GCA 90 bp TATTCTGTGTGGGAAGACATGAAAGAAAAATGCCTGTACCATCACCCTTCCCAGGACATGAAAGAAAAATaGCTGTACCATCACCCTTCC +
Preference number: 4 (lower is better)
Translates to: YSVWEDMKEKCLYHHPSQDMKEK*LYHHPS
Trigger: GGAAGGGTGATGGTACAGGCATTTTTCTTTCATGTC...CTGGGAAGGGTGATGGTACAGGCATTTTTCTTTCATGTCTTCCCACACAGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp TATTCTGTGTGGGAAGACATGAAAGAAAAATGCCTGTACCATCACCCTTCCCAGGAGAAATTAAGCATTTaGCCAAGGTCACCAAGATGG +
Preference number: 4 (lower is better)
Translates to: YSVWEDMKEKCLYHHPSQEKLSI*PRSPRW
Trigger: CCATCTTGGTGACCTTGGGCAAATGCTTAATTTCTC...CTGGGAAGGGTGATGGTACAGGCATTTTTCTTTCATGTCTTCCCACACAGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp ACACCTTATCTAAAGAGGTCAATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGTTTCTGCGATTGTGGTaGACTTTCCTGAGGTTAACT +
Preference number: 4 (lower is better)
Translates to: TPYLKRSICLLGILPVPVFLRLW*TFLRLT
Trigger: AGTTAACCTCAGGAAAGTGCACCACAATCGCAGAAA...CACTGGCACTGGCAGTATTCCTAACAAGCAGATTGACCTCTTTAGATAAGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCCTCTGGCAGGTATGGTaGAGGATCTGGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGLWQVW*RIWKKV
Trigger: CACCTTCTTCCAGATCCTCCACCATACCTGCCAGAG...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAATCCGTGAGGTACCTCTaGCAGGTATGGTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKSVRYL*QVWWRI
Trigger: GATCCTCCACCATACCTGCCAGAGGTACCTCACGGA...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTCTGTCAGCAGCTGAATaGAGGATGCTGTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHILSAAE*RMLFPP
Trigger: GGGAGGAAACAGCATCCTCCATTCAGCTGCTGACAG...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTACGGTACTCACCAAATaGCATGTTCCTCGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTTVLTK*HVPRFF
Trigger: AAAGAAGCGAGGAACATGCCATTTGGTGAGTACCGT...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTTGGGACTGCACTTCATaGAAAACTCCACACACAAAG +
Preference number: 4 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTWDCTS*KTPHTK
Trigger: CTTTGTGTGTGGAGTTTTCCATGAAGTGCAGTCCCA...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396700.5
CDS-3UTR CCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCTGTCAGCAGCTGAATaGAGGATGCTGTTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLLSAAE*RMLFPE
Trigger: TTCAGGAAACAGCATCCTCCATTCAGCTGCTGACAG...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548369.1
3UTR CAA 72 bp TCTATCTGCACTGTAGACAACAAGCACCTGCGTATTTaGAAGTCAGGGTTGTGCAAAAGTGATCCATTGACT +
Preference number: 4 (lower is better)
Translates to: SICTVDNKHLRI*KSGLCKSDPLT
Trigger: AGTCAATGGATCACTTTTGCACAACCCTGACTTCAAAATACGCAGGTGCTTGTTGTCTACAGTGCAGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp GGTAGGCTTACAATGTGTCTGAGATGTGCAGCTTGTCTCCTAGTTTCACAAAAATGTGTGTGTGCATTCTaGACTGAGATCTGCAAACAA +
Preference number: 4 (lower is better)
Translates to: GRLTMCLRCAACLLVSQKCVCAF*TEICKQ
Trigger: TTGTTTGCAGATCTCAGTTCAGAATGCACACACACA...TTTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGACACATTGTAAGCCTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp ATGACAGTGACAAGAGAAACATCTGTGAGTACACAGAGGGTTTTAGGTAGGCTTCCAACTCTCTATCTCTaGAACCAGAATCCAATTTGG +
Preference number: 4 (lower is better)
Translates to: MTVTRETSVSTQRVLGRLPTLYL*NQNPIW
Trigger: CCAAATTGGATTCTGGTTTCAGAGATAGAGAGTTGG...AAGCCTACCTAAAACCCTCTGTGTACTCACAGATGTTTCTCTTGTCACTGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTATCTTTTGATTGGGTTTaGCTGACGCACTTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLSFDWV*LTHLQQ
Trigger: TTGCTGCAAGTGCGTCAGTCAAACCCAATCAAAAGA...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548369.1
CDS-3UTR TCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTAGCCGACATTTCTTTTaGTTGGGTTTGACTGACGCA +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLSRHFF*LGLTDA
Trigger: TGCGTCAGTCAAACCCAATCAAAAGAAATGTCGGCT...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548369.1
CDS-3UTR GCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATTAACCTGGCGAAGCTaGTCGAGCATCCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISLTWRS*SSIHCD
Trigger: ATCACAGTGGATGCTCGAGCAGCTTCGCCAGGTTAA...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp TTTAATGTGCACCATCTGATATTTTTACCCCCAGTAGACAAACTTTCTCTCTCCATTTTTCTGACGCTGTaGTGGCTACCCACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: FNVHHLIFLPPVDKLSLSIFLTL*WLPTGQ
Trigger: TTGACCAGTGGGTAGCCAGCACAGCGTCAGAAAAAT...GGAGAGAGAAAGTTTGTCTACTGGGGGTAAAAATATCAGATGGTGCACATTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAACTTGTGCGCAGTTTCTaGAAACTGCTGGGCGCTGTT +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKLVRSF*KLLGAV
Trigger: AACAGCGCCCAGCAGTTTGCAGAAACTGCGCACAAG...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTGTTTCTCAACATTTGTaGTTCATGGCAAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTVSQHL*FMASLC
Trigger: GCACAAGCTTGCCATGAAGCACAAATGTTGAGAAAC...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTTCAGACCAGGCAAGGTaGAATTGCCATGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLSDQAR*NCHEMQ
Trigger: TTGCATTTCATGGCAATTGCACCTTGCCTGGTCTGA...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp GGTAGGCTTACAATGTGTCTGAGATGTGCAGCTTGTCTCCTAGTTTCACAAAAACAGCTTAAAAATCAATaGGCTGCAGTGGTAGGCTTA +
Preference number: 4 (lower is better)
Translates to: GRLTMCLRCAACLLVSQKQLKNQ*AAVVGL
Trigger: TAAGCCTACCACTGCAGCGCATTGATTTTTAAGCTG...TTTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGACACATTGTAAGCCTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAGATTTTCCTAGAAGATaGCAGAGTTCGCGAAGATCG +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLDFPRR*QSSRRS
Trigger: CGATCTTCGCGAACTCTGGCATCTTCTAGGAAAATC...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR GCA 90 bp TATTCTGTGTGGGAAGACATGAAAGAAAAATGCCTGTACCATCACCCTTCCCAGGGATCATTTTCTATCTaGACTGTAGACAACAAGCAC +
Preference number: 4 (lower is better)
Translates to: YSVWEDMKEKCLYHHPSQGSFSI*TVDNKH
Trigger: GTGCTTGTTGTCTACAGTGCAGATAGAAAATGATCC...CTGGGAAGGGTGATGGTACAGGCATTTTTCTTTCATGTCTTCCCACACAGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCTCGATACCATTAACCTaGCGAAGCTGCTCGAGCATC +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGSIPLT*RSCSSI
Trigger: GATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGA...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTCTCTGGCAGGTATGGTaGAGGATCTGGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: FHLGKITSDVTTLKCLPALWQVW*RIWKKV
Trigger: CACCTTCTTCCAGATCCTCCACCATACCTGCCAGAG...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
CDS-3UTR CCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTGCAGTTAATAAACTCTaGCTTCCTGTCCGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLAVNKL*LPVREV
Trigger: TACCTCACGGACAGGAAGCCAGAGTTTATTAACTGC...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCTGTCAGCAGCTGAATaGAGGATGCTGTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRLSAAE*RMLFPP
Trigger: GGGAGGAAACAGCATCCTCCATTCAGCTGCTGACAG...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp GGTAGGCTTACAATGTGTCTGAGATGTGCAGCTTGTCTCCTAGTTTCACAAAAAAACATTTGTGCTTCATaGCAAGCTTGTGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GRLTMCLRCAACLLVSQKNICAS*QACAQF
Trigger: AAACTGCGCACAAGCTTGCCATGAAGCACAAATGTT...TTTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGACACATTGTAAGCCTACC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp AATAGCTTCCAACGGTACTCACCAAATGGCATGTTCCTCGCTTCTTTAAATTTTCACACATACACACAGTaGGAGGAGGCAAAAACCCAA +
Preference number: 4 (lower is better)
Translates to: NSFQRYSPNGMFLASLNFHTYTQ*EEAKTQ
Trigger: TTGGGTTTTTGCCTCCTCCCACTGTGTGTATGTGTG...AAAATTTAAAGAAGCGAGGAACATGCCATTTGGTGAGTACCGTTGGAAGCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAACGCAGCCTTTTAGTTaGGACTGCACTTCATGGAAA +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLTQPFS*DCTSWK
Trigger: TTTCCATGAAGTGCAGTCCCAACTAAAAGGCTGCGT...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396700.5
ENST00000550887.5
CDS-3UTR CCA 90 bp TCCTCTACCCAACTCAACAACTTAAATGTTTCCCCAGATTTCCACTATCCGTCTAGAATTCAGGCCATCTaGTTAGGTTATCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: SSTQLNNLNVSPDFHYPSRIQAI*LGYPIQ
Trigger: CTGGATTGGATAACCTAACCAGATGGCCTGAATTCT...AGACGGATAGTGGAAATCTGGGGAAACATTTAAGTTGTTGAGTTGGGTAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 72 bp ACATTGTTGTTAGAGAGTTGGCAACCACTTCTGTTCTaGAATTTGGCGGACTGTCAGGGGGTTTTAGATTTA +
Preference number: 4 (lower is better)
Translates to: TLLLESWQPLLF*NLADCQGVLDL
Trigger: TAAATCTAAAACCCCCTGACAGTCCGCCAAATTCAAGAACAGAAGTGGTTGCCAACTCTCTAACAACAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAGTTAAATATTCGCCTTaGCCTCCAGTTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLVKYSP*PPVAKK
Trigger: TTTCTTGGCAACTGGAGGTCAAGGCGAATATTTAAC...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR TCA 90 bp ATGACAGTGACAAGAGAAACATCTGTGAGTACACAGAGGGTTTTAGGTAGGCTTGTGTGCATTCTGAACTaGGATCTGCAAACAAAATCT +
Preference number: 4 (lower is better)
Translates to: MTVTRETSVSTQRVLGRLVCILN*DLQTKS
Trigger: AGATTTTGTTTGCAGATCTCAGTTCAGAATGCACAC...AAGCCTACCTAAAACCCTCTGTGTACTCACAGATGTTTCTCTTGTCACTGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAACCACTTCTGTTCTTaGATTTGGCGGACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGNHFCS*IWRTVR
Trigger: CCTGACAGTCCGCCAAATTCAAGAACAGAAGTGGTT...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAATTAACCTGGCGAAGCTaGTCGAGCATCCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKLTWRS*SSIHCD
Trigger: ATCACAGTGGATGCTCGAGCAGCTTCGCCAGGTTAA...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTACAACAAATCAAACTCTaGCGAATCCCCATTAGGATC +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLQQIKL*RIPIRI
Trigger: GATCCTAATGGGGATTCGGCAGAGTTTGATTTGTTG...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAACAAATCAAACTCTaGCGAATCCCCATTAGGATC +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLQQIKL*RIPIRI
Trigger: GATCCTAATGGGGATTCGGCAGAGTTTGATTTGTTG...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTGGATCTGGAAGAAGGTaGATTTTTCTGACGCTGTGC +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIGSGRR*IFLTLC
Trigger: GCACAGCGTCAGAAAAATGCACCTTCTTCCAGATCC...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCTTCATGGCAAGCTTGTaGGCAGTTTCTGCAAACTGC +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGFMASL*AVSANC
Trigger: GCAGTTTGCAGAAACTGCGCACAAGCTTGCCATGAA...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATTCATGGCAAGCTTGTaGGCAGTTTCTGCAAACTGC +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISFMASL*AVSANC
Trigger: GCAGTTTGCAGAAACTGCGCACAAGCTTGCCATGAA...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTTTCATGGCAAGCTTGTaGGCAGTTTCTGCAAACTGC +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIFMASL*AVSANC
Trigger: GCAGTTTGCAGAAACTGCGCACAAGCTTGCCATGAA...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAGTTTCTCAACATTTGTaGTTCATGGCAAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLVSQHL*FMASLC
Trigger: GCACAAGCTTGCCATGAAGCACAAATGTTGAGAAAC...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR GCA 90 bp ATGACAGTGACAAGAGAAACATCTGTGAGTACACAGAGGGTTTTAGGTAGGCTTGCTGGTGATGGTTCATaGAAAAGATTACTATGCAAG +
Preference number: 4 (lower is better)
Translates to: MTVTRETSVSTQRVLGRLAGDGS*KRLLCK
Trigger: CTTGCATAGTAATCTTTTGCATGAACCATCACCAGC...AAGCCTACCTAAAACCCTCTGTGTACTCACAGATGTTTCTCTTGTCACTGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp GGTAGGCTTACAATGTGTCTGAGATGTGCAGCTTGTCTCCTAGTTTCACAAAAACTCTCTCCTTGGGAATaGTTTATTAGGAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: GRLTMCLRCAACLLVSQKLSPWE*FIRRTS
Trigger: TGAAGTTCTCCTAATAAAGCATTCCCAAGGAGAGAG...TTTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGACACATTGTAAGCCTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AACCTCCAAAATCCAGATACCAAGAAACTAAAGGCCCTCTCCCAAGGACATTATACCGTATTAATACTTTaGACTGCAGCACCTTCTACA +
Preference number: 4 (lower is better)
Translates to: NLQNPDTKKLKALSQGHYTVLIL*TAAPST
Trigger: TGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT...ATAATGTCCTTGGGAGAGGGCCTTTAGTTTCTTGGTATCTGGATTTTGGAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCCTTTTAGTTGGGACTaGACTTCATGGAAAACTCCA +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLPFSWD*TSWKTP
Trigger: TGGAGTTTTCCATGAAGTGCAGTCCCAACTAAAAGG...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396700.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTAACTCATCACTGACATaGCAGTCATTTCCATTCTGC +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLNSSLT*QSFPFC
Trigger: GCAGAATGGAAATGACTGGCATGTCAGTGATGAGTT...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548369.1
CDS-3UTR CCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTTCGATACCATTAACCTaGCGAAGCTGCTCGAGCATC +
Preference number: 4 (lower is better)
Translates to: FHLGKITSDVTTLKCLPASIPLT*RSCSSI
Trigger: GATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGA...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
CDS-3UTR CCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGTCGATACCATTAACCTaGCGAAGCTGCTCGAGCATC +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRSIPLT*RSCSSI
Trigger: GATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGA...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp AATAGCTTCCAACGGTACTCACCAAATGGCATGTTCCTCGCTTCTTTAAATTTTGTGCTGGCTACCCACTaGTCAAAAGCATTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: NSFQRYSPNGMFLASLNFVLATH*SKAFSN
Trigger: GTTTGAAAATGCTTTTGACCAGTGGGTAGCCAGCAC...AAAATTTAAAGAAGCGAGGAACATGCCATTTGGTGAGTACCGTTGGAAGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTGTTTCTGCAAACTGCTaGGCGCTGTTCTTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FHLGKITSDVTTLKCLPAVSANC*ALFFRS
Trigger: AGACCTGAAGAACAGCGCCCAGCAGTTTGCAGAAAC...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
CDS-3UTR CCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGGTTTCTGCAAACTGCTaGGCGCTGTTCTTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRVSANC*ALFFRS
Trigger: AGACCTGAAGAACAGCGCCCAGCAGTTTGCAGAAAC...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTAACATTTGTGCTTCATaGCAAGCTTGTGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLNICAS*QACAQF
Trigger: AAACTGCGCACAAGCTTGCCATGAAGCACAAATGTT...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR CCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTCACACATACACACAGTaGGAGGAGGCAAAAACCCAA +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIHTYTQ*EEAKTQ
Trigger: TTGGGTTTTTGCCTCCTCCCACTGTGTGTATGTGTG...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTTTGTTGTTAGAGAGTTaGCAACCACTTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTLLLES*QPLLFL
Trigger: CAAGAACAGAAGTGGTTGCCAACTCTCTAACAACAA...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp TTTAATGTGCACCATCTGATATTTTTACCCCCAGTAGACAAACTTTCTCTCTCCGTTAAATATTCGCCTTaGCCTCCAGTTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: FNVHHLIFLPPVDKLSLSVKYSP*PPVAKK
Trigger: TTTCTTGGCAACTGGAGGTCAAGGCGAATATTTAAC...GGAGAGAGAAAGTTTGTCTACTGGGGGTAAAAATATCAGATGGTGCACATTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTAGCCCCTTATTATCTTaGGTAATAGAAAATCACGAG +
Preference number: 4 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTSPLLS*VIENHE
Trigger: CTCGTGATTTTCTATTACTCAAGATAATAAGGGGCT...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTAACCACTTCTGTTCTTaGATTTGGCGGACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: FHLGKITSDVTTLKCLPANHFCS*IWRTVR
Trigger: CCTGACAGTCCGCCAAATTCAAGAACAGAAGTGGTT...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTTCAGGCTATTTCCAATaGAACTTAGGTCTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTSGYFQ*NLGLKG
Trigger: TCCTTTTAGACCTAAGTTTCATTGGAAATAGCCTGA...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp GGTAGGCTTACAATGTGTCTGAGATGTGCAGCTTGTCTCCTAGTTTCACAAAAATCAGGCTATTTCCAATaGAACTTAGGTCTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: GRLTMCLRCAACLLVSQKSGYFQ*NLGLKG
Trigger: TCCTTTTAGACCTAAGTTTCATTGGAAATAGCCTGA...TTTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGACACATTGTAAGCCTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGATTTTTCTGACGCTGTaGTGGCTACCCACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRIFLTL*WLPTGQ
Trigger: TTGACCAGTGGGTAGCCAGCACAGCGTCAGAAAAAT...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAATTTTTCTGACGCTGTaGTGGCTACCCACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKIFLTL*WLPTGQ
Trigger: TTGACCAGTGGGTAGCCAGCACAGCGTCAGAAAAAT...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGGGATCTGGAAGAAGGTaGATTTTTCTGACGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRGSGRR*IFLTLC
Trigger: GCACAGCGTCAGAAAAATGCACCTTCTTCCAGATCC...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AATAGCTTCCAACGGTACTCACCAAATGGCATGTTCCTCGCTTCTTTAAATTTTGTTTCTCAACATTTGTaGTTCATGGCAAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: NSFQRYSPNGMFLASLNFVSQHL*FMASLC
Trigger: GCACAAGCTTGCCATGAAGCACAAATGTTGAGAAAC...AAAATTTAAAGAAGCGAGGAACATGCCATTTGGTGAGTACCGTTGGAAGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAGCTGGTGATGGTTCATaGAAAAGATTACTATGCAAG +
Preference number: 4 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLAGDGS*KRLLCK
Trigger: CTTGCATAGTAATCTTTTGCATGAACCATCACCAGC...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
CDS-3UTR CCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTGTGCTGGCTACCCACTaGTCAAAAGCATTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIVLATH*SKAFSN
Trigger: GTTTGAAAATGCTTTTGACCAGTGGGTAGCCAGCAC...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCAGCAGTTAATAAACTCTaGCTTCCTGTCCGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISAVNKL*LPVREV
Trigger: TACCTCACGGACAGGAAGCCAGAGTTTATTAACTGC...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCGCAGTTAATAAACTCTaGCTTCCTGTCCGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGAVNKL*LPVREV
Trigger: TACCTCACGGACAGGAAGCCAGAGTTTATTAACTGC...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCACACATACACACAGTaGGAGGAGGCAAAAACCCAA +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRHTYTQ*EEAKTQ
Trigger: TTGGGTTTTTGCCTCCTCCCACTGTGTGTATGTGTG...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTACGGTACTCACCAAATaGCATGTTCCTCGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHITVLTK*HVPRFF
Trigger: AAAGAAGCGAGGAACATGCCATTTGGTGAGTACCGT...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTTGGGACTGCACTTCATaGAAAACTCCACACACAAAG +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIWDCTS*KTPHTK
Trigger: CTTTGTGTGTGGAGTTTTCCATGAAGTGCAGTCCCA...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396700.5
ENST00000550887.5
CDS-3UTR CCA 90 bp GACAGCGCTATATTCAAACACAAGATGTTAACTACTATTCCATATTGCTTTCCCAAGTACTTTCCCTCATaGAGCTTACATTCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: DSAIFKHKMLTTIPYCFPKYFPS*SLHSCS
Trigger: GCTGCACGAATGTAAGCTCCATGAGGGAAAGTACTT...GGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATATAGCGCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp GACAGCGCTATATTCAAACACAAGATGTTAACTACTATTCCATATTGCTTTCCCAAAATGACAGCTTCATaGTCAGCCTATGCTAGCAGG +
Preference number: 4 (lower is better)
Translates to: DSAIFKHKMLTTIPYCFPKMTAS*SAYASR
Trigger: CCTGCTAGCATAGGCTGACCATGAAGCTGTCATTTT...GGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATATAGCGCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
3UTR CAA 72 bp TTTCACAGTATGCTTATGACCTCATCCTCAGCTACTTaGGAATCAGCTTCCCAAACATTGTTGTTAGAGAGT +
Preference number: 4 (lower is better)
Translates to: FHSMLMTSSSAT*ESASQTLLLES
Trigger: ACTCTCTAACAACAATGTTTGGGAAGCTGATTCCAAAGTAGCTGAGGATGAGGTCATAAGCATACTGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR CAA 72 bp GCTCAACCAAACTGGTCCCAAATCATGACAGTTATTTaGTCTAAGACCGTATTAATACTTTGCACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AQPNWSQIMTVI*SKTVLILCTAA
Trigger: TGCTGCAGTGCAAAGTATTAATACGGTCTTAGACAAAATAACTGTCATGATTTGGGACCAGTTTGGTTGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCGTTAAATATTCGCCTTaGCCTCCAGTTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGVKYSP*PPVAKK
Trigger: TTTCTTGGCAACTGGAGGTCAAGGCGAATATTTAAC...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR TCA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTACTGGTCCCAAATCATaGCAGTTATTTTGTCTAAGA +
Preference number: 4 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLTGPKS*QLFCLR
Trigger: TCTTAGACAAAATAACTGTCATGATTTGGGACCAGT...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCAGCCTTGACCTCCAGTTaGCAAGAAAGGAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISALTSS*QERNLF
Trigger: AAAAAGATTCCTTTCTTGGCAACTGGAGGTCAAGGC...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTGCCTTGACCTCCAGTTaGCAAGAAAGGAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIALTSS*QERNLF
Trigger: AAAAAGATTCCTTTCTTGGCAACTGGAGGTCAAGGC...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCAGTTTCTCAACATTTGTaGTTCATGGCAAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISVSQHL*FMASLC
Trigger: GCACAAGCTTGCCATGAAGCACAAATGTTGAGAAAC...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp GAGAAGTGCAGAAATGAAACAAATGAAATGTCTTCTGACAAGCTCAACCAAACTCAGGCAAGGTGCAATTaGCATGAAATGCAATTTGTC +
Preference number: 4 (lower is better)
Translates to: EKCRNETNEMSSDKLNQTQARCN*HEMQFV
Trigger: GACAAATTGCATTTCATGGCAATTGCACCTTGCCTG...AGTTTGGTTGAGCTTGTCAGAAGACATTTCATTTGTTTCATTTCTGCACTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAATCAGACCAGGCAAGGTaGAATTGCCATGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKSDQAR*NCHEMQ
Trigger: TTGCATTTCATGGCAATTGCACCTTGCCTGGTCTGA...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp TTTAATGTGCACCATCTGATATTTTTACCCCCAGTAGACAAACTTTCTCTCTCCATTAATACTTTGCACTaGAGCACCTTCTACAAGAGG +
Preference number: 4 (lower is better)
Translates to: FNVHHLIFLPPVDKLSLSINTLH*STFYKR
Trigger: CCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAAT...GGAGAGAGAAAGTTTGTCTACTGGGGGTAAAAATATCAGATGGTGCACATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTGTGCTGGCTACCCACTaGTCAAAAGCATTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: FHLGKITSDVTTLKCLPAVLATH*SKAFSN
Trigger: GTTTGAAAATGCTTTTGACCAGTGGGTAGCCAGCAC...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
CDS-3UTR CCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAGTGCTGGCTACCCACTaGTCAAAAGCATTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKVLATH*SKAFSN
Trigger: GTTTGAAAATGCTTTTGACCAGTGGGTAGCCAGCAC...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAGCAGTTAATAAACTCTaGCTTCCTGTCCGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKAVNKL*LPVREV
Trigger: TACCTCACGGACAGGAAGCCAGAGTTTATTAACTGC...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAACATTTGTGCTTCATaGCAAGCTTGTGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGNICAS*QACAQF
Trigger: AAACTGCGCACAAGCTTGCCATGAAGCACAAATGTT...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCCATCCTCAGCTACTTTaGAATCAGCTTCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGHPQLL*NQLPKH
Trigger: ATGTTTGGGAAGCTGATTCCAAAGTAGCTGAGGATG...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAGGTATGAACGCAGCCTaGAAACTAATCATTAGAGGG +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKGMNAA*KLIIRG
Trigger: CCCTCTAATGATTAGTTTCCAGGCTGCGTTCATACC...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTCAAGCTCAACCAAACTaGTCCCAAATCATGACAGTT +
Preference number: 4 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIQAQPN*SQIMTV
Trigger: AACTGTCATGATTTGGGACCAGTTTGGTTGAGCTTG...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGACGCAGCCTTTTAGTTaGGACTGCACTTCATGGAAA +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRTQPFS*DCTSWK
Trigger: TTTCCATGAAGTGCAGTCCCAACTAAAAGGCTGCGT...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396700.5
ENST00000550887.5
CDS-3UTR TCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAGTTAAATATTCGCCTTaGCCTCCAGTTGCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKVKYSP*PPVAKK
Trigger: TTTCTTGGCAACTGGAGGTCAAGGCGAATATTTAAC...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR TCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGAAATCACGAGGTGTGTaGCCAACTGTATTGAAACTG +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRKSRGV*PTVLKL
Trigger: CAGTTTCAATACAGTTGGTCACACACCTCGTGATTT...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp TTTAATGTGCACCATCTGATATTTTTACCCCCAGTAGACAAACTTTCTCTCTCCCATCTAAAAGGATTCTaGAATCTGTCTCCGACAAAT +
Preference number: 4 (lower is better)
Translates to: FNVHHLIFLPPVDKLSLSHLKGF*NLSPTN
Trigger: ATTTGTCGGAGACAGATTTCAGAATCCTTTTAGATG...GGAGAGAGAAAGTTTGTCTACTGGGGGTAAAAATATCAGATGGTGCACATTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCGTGTGCATTCTGAACTaGGATCTGCAAACAAAATCT +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGVCILN*DLQTKS
Trigger: AGATTTTGTTTGCAGATCTCAGTTCAGAATGCACAC...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCCAACTCTCTATCTCTaGAACCAGAATCCAATTTGG +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRPTLYL*NQNPIW
Trigger: CCAAATTGGATTCTGGTTTCAGAGATAGAGAGTTGG...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGTTCACAGTATGCTTATaGCCTCATCCTCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRFTVCL*PHPQLL
Trigger: AAGTAGCTGAGGATGAGGTCATAAGCATACTGTGAA...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTGCCTTGACCTCCAGTTaGCAAGAAAGGAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: FHLGKITSDVTTLKCLPAALTSS*QERNLF
Trigger: AAAAAGATTCCTTTCTTGGCAACTGGAGGTCAAGGC...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
CDS-3UTR GCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAACAAATCAAACTCTaGCGAATCCCCATTAGGATC +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRQQIKL*RIPIRI
Trigger: GATCCTAATGGGGATTCGGCAGAGTTTGATTTGTTG...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAACAACAAATCAAACTCTaGCGAATCCCCATTAGGATC +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKQQIKL*RIPIRI
Trigger: GATCCTAATGGGGATTCGGCAGAGTTTGATTTGTTG...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAGTTTCTCAACATTTGTaGTTCATGGCAAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKVSQHL*FMASLC
Trigger: GCACAAGCTTGCCATGAAGCACAAATGTTGAGAAAC...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR GCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTCAGCTTAAAAATCAATaGGCTGCAGTGGTAGGCTTA +
Preference number: 4 (lower is better)
Translates to: FHLGKITSDVTTLKCLPAQLKNQ*AAVVGL
Trigger: TAAGCCTACCACTGCAGCGCATTGATTTTTAAGCTG...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCACTCTCTCCTTGGGAATaGTTTATTAGGAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISLSPWE*FIRRTS
Trigger: TGAAGTTCTCCTAATAAAGCATTCCCAAGGAGAGAG...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp GAGAAGTGCAGAAATGAAACAAATGAAATGTCTTCTGACAAGCTCAACCAAACTATTAATACTTTGCACTaGAGCACCTTCTACAAGAGG +
Preference number: 4 (lower is better)
Translates to: EKCRNETNEMSSDKLNQTINTLH*STFYKR
Trigger: CCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAAT...AGTTTGGTTGAGCTTGTCAGAAGACATTTCATTTGTTTCATTTCTGCACTTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp GAGAAGTGCAGAAATGAAACAAATGAAATGTCTTCTGACAAGCTCAACCAAACTACCGTATTAATACTTTaGACTGCAGCACCTTCTACA +
Preference number: 4 (lower is better)
Translates to: EKCRNETNEMSSDKLNQTTVLIL*TAAPST
Trigger: TGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT...AGTTTGGTTGAGCTTGTCAGAAGACATTTCATTTGTTTCATTTCTGCACTTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp TTCTTGAATTTGGCGGACTGTCAGGGGGTTTTAGATTTATCCTTTCAATTATTTCCTTTTAGTTGGGACTaGACTTCATGGAAAACTCCA +
Preference number: 4 (lower is better)
Translates to: FLNLADCQGVLDLSFQLFPFSWD*TSWKTP
Trigger: TGGAGTTTTCCATGAAGTGCAGTCCCAACTAAAAGG...AAATAATTGAAAGGATAAATCTAAAACCCCCTGACAGTCCGCCAAATTCAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396700.5
CDS-3UTR GCA 90 bp GCTTTGAACTCATTCAATTCTCTGAACACTCTAGTACGTAGGTACTATTCTCATCTAAAGAGGTCAATCTaGTTGTTAGGAATACTGCCA +
Preference number: 4 (lower is better)
Translates to: ALNSFNSLNTLVRRYYSHLKRSI*LLGILP
Trigger: TGGCAGTATTCCTAACAAGCAGATTGACCTCTTTAG...ATGAGAATAGTACCTACGTACTAGAGTGTTCAGAGAATTGAATGAGTTCAAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR GCA 90 bp GACAGCGCTATATTCAAACACAAGATGTTAACTACTATTCCATATTGCTTTCCCTCAAAGCATTGCGTCTaGTGCAACATTGTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: DSAIFKHKMLTTIPYCFPSKHCV*CNIVLF
Trigger: AAAAAGCACAATGTTGCAGCAGACGCAATGCTTTGA...GGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATATAGCGCTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTAACATTTGTGCTTCATaGCAAGCTTGTGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: FHLGKITSDVTTLKCLPANICAS*QACAQF
Trigger: AAACTGCGCACAAGCTTGCCATGAAGCACAAATGTT...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
CDS-3UTR CCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAAACATTTGTGCTTCATaGCAAGCTTGTGCGCAGTTT +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKNICAS*QACAQF
Trigger: AAACTGCGCACAAGCTTGCCATGAAGCACAAATGTT...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CCA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCTTGTTGTTAGAGAGTTaGCAACCACTTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGLLLES*QPLLFL
Trigger: CAAGAACAGAAGTGGTTGCCAACTCTCTAACAACAA...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCATCCTCAGCTACTTTaGAATCAGCTTCCCAAACAT +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRHPQLL*NQLPKH
Trigger: ATGTTTGGGAAGCTGATTCCAAAGTAGCTGAGGATG...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAACAAGCTCAACCAAACTaGTCCCAAATCATGACAGTT +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKQAQPN*SQIMTV
Trigger: AACTGTCATGATTTGGGACCAGTTTGGTTGAGCTTG...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
3UTR CAA 72 bp TATATTCAAACACAAGATGTTAACTACTATTCCATATaGCTTTCCCAATTGCCTCGCAAACTTGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: YIQTQDVNYYSI*LSQLPRKLGHS
Trigger: ACTGTGGCCAAGTTTGCGAGGCAATTGGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR TCA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCAAGCCCCTTATTATCTTaGGTAATAGAAAATCACGAG +
Preference number: 4 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISSPLLS*VIENHE
Trigger: CTCGTGATTTTCTATTACTCAAGATAATAAGGGGCT...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR TCA 90 bp GAGAAGTGCAGAAATGAAACAAATGAAATGTCTTCTGACAAGCTCAACCAAACTACTGGTCCCAAATCATaGCAGTTATTTTGTCTAAGA +
Preference number: 4 (lower is better)
Translates to: EKCRNETNEMSSDKLNQTTGPKS*QLFCLR
Trigger: TCTTAGACAAAATAACTGTCATGATTTGGGACCAGT...AGTTTGGTTGAGCTTGTCAGAAGACATTTCATTTGTTTCATTTCTGCACTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp GAGAAGTGCAGAAATGAAACAAATGAAATGTCTTCTGACAAGCTCAACCAAACTAACTTTCTCTCTCCTTaGGAATGCTTTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: EKCRNETNEMSSDKLNQTNFLSP*ECFIRR
Trigger: TCTCCTAATAAAGCATTCCCAAGGAGAGAGAAAGTT...AGTTTGGTTGAGCTTGTCAGAAGACATTTCATTTGTTTCATTTCTGCACTTCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAATCCTATGTAAGAGGCTaGAATACATATCGACTCAAT +
Preference number: 4 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKSYVRG*NTYRLN
Trigger: ATTGAGTCGATATGTATTGCAGCCTCTTACATAGGA...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTTCCTATGTAAGAGGCTaGAATACATATCGACTCAAT +
Preference number: 4 (lower is better)
Translates to: FHLGKITSDVTTLKCLPASYVRG*NTYRLN
Trigger: ATTGAGTCGATATGTATTGCAGCCTCTTACATAGGA...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGAACTTTCTCTCTCCTTaGGAATGCTTTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRNFLSP*ECFIRR
Trigger: TCTCCTAATAAAGCATTCCCAAGGAGAGAGAAAGTT...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR GCA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGGCAATTGCCATGAAATaGAATTTGTCAAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRAIAMK*NLSRNS
Trigger: TGAGTTTCTTGACAAATTGCATTTCATGGCAATTGC...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS GCA 90 bp GGCGCTGGAGCTCCAGCTGCAGCCGCGCGCCCGCCCGCCGCCGAGTaGGAGCGCCTGCGAAGCAAACCTGCCCGCGCGGCCGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: GAGAPAAAARPPAAE*ERLRSKPARAAASE
Trigger: CTCAGAGGCGGCCGCGCGGGCAGGTTTGCTTCGCAGGCGCTCGCACTCGGCGGCGGGCGGGCGCGCGGCTGCAGCTGGAGCTCCAGCGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323944.9
CDS TCA 90 bp CGAGTGCGAGCGCCTGCGAAGCAAACCTGCCCGCGCGGCCGCCTCTaGGCATGCTCAGTGCCGCCGTGGGCGAGCCCGAGCGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: RVRAPAKQTCPRGRL*ACSVPPWASPSALA
Trigger: GGCCAGGGCGCTCGGGCTCGCCCACGGCGGCACTGAGCATGCTCAGAGGCGGCCGCGCGGGCAGGTTTGCTTCGCAGGCGCTCGCACTCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323944.9
CDS GCA 90 bp CTCCAGCTGCAGCCGCGCGCCCGCCCGCCGCCGAGTGCGAGCGCCTaGGAAGCAAACCTGCCCGCGCGGCCGCCTCTGAGCATGCTCAGT +
Preference number: 5 (lower is better)
Translates to: LQLQPRARPPPSASA*EANLPARPPLSMLS
Trigger: ACTGAGCATGCTCAGAGGCGGCCGCGCGGGCAGGTTTGCTTCGCAGGCGCTCGCACTCGGCGGCGGGCGGGCGCGCGGCTGCAGCTGGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323944.9
CDS CCA 90 bp CACAGCCACCCGCCTCGGACGGAGCGCCAGGCGCCCCAACAGCCGTaGCGGCTGCAACCGCATCTCCCGGGCTTGGCCTCCGCCCTGACC +
Preference number: 5 (lower is better)
Translates to: HSHPPRTERQAPQQP*RLQPHLPGLASALT
Trigger: GGTCAGGGCGGAGGCCAAGCCCGGGAGATGCGGTTGCAGCCGCCACGGCTGTTGGGGCGCCTGGCGCTCCGTCCGAGGCGGGTGGCTGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS GCA 90 bp CTGCGAAGCAAACCTGCCCGCGCGGCCGCCTCTGAGCATGCTCAGTaGCGCCGTGGGCGAGCCCGAGCGCCCTGGCCCGGGGCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: LRSKPARAAASEHAQ*RRGRARAPWPGAKS
Trigger: GCTCTTTGCCCCGGGCCAGGGCGCTCGGGCTCGCCCACGGCGGCACTGAGCATGCTCAGAGGCGGCCGCGCGGGCAGGTTTGCTTCGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323944.9
CDS GCA 90 bp GGACAGCACGCAGTGAATCGTGCAGCCTGGCTCGCGCCCCTGCCGTaGCAGTGCGCGGCACGCGTCCCAGAGCACGAGGCTCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: GQHAVNRAAWLAPLP*QCAARVPEHEAPPR
Trigger: CCGGGGAGGAGCCTCGTGCTCTGGGACGCGTGCCGCGCACTGGCACGGCAGGGGCGCGAGCCAGGCTGCACGATTCACTGCGTGCTGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323944.9
CDS GCA 90 bp GAGAGAACCAGGGACACGAGTCCCTCTCTGCGCGCACAAAGCAGCTaGGCCGGGGCGCGCGGCCCCCTCTCCCGCCACCCGCCAACTTGG +
Preference number: 5 (lower is better)
Translates to: ERTRDTSPSLRAQSS*AGARGPLSRHPPTW
Trigger: CCAAGTTGGCGGGTGGCGGGAGAGGGGGCCGCGCGCCCCGGCGCAGCTGCTTTGTGCGCGCAGAGAGGGACTCGTGTCCCTGGTTCTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS GCA 90 bp AACGGGTCCCAGGGTTGGAGAGAACCAGGGACACGAGTCCCTCTCTaGGCGCACAAAGCAGCTGCGCCGGGGCGCGCGGCCCCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: NGSQGWREPGTRVPL*AHKAAAPGRAAPSP
Trigger: GGGAGAGGGGGCCGCGCGCCCCGGCGCAGCTGCTTTGTGCGCGCAGAGAGGGACTCGTGTCCCTGGTTCTCTCCAACCCTGGGACCCGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS TCA 90 bp TGCACGGCAAGCGCGAATTCGGAACCTGGCGCCCTTGACCAAGCCTaGGATCGGAAAGGGGGCATCGCCCAGGGCCAGCGCCCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: CTASANSEPGALDQA*DRKGGIAQGQRPGG
Trigger: GCCCCCAGGGCGCTGGCCCTGGGCGATGCCCCCTTTCCGATCTCAGGCTTGGTCAAGGGCGCCAGGTTCCGAATTCGCGCTTGCCGTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS GCA 90 bp CCCTCTCCCGCCACCCGCCAACTTGGAAGAATCTCTCTGGGAGCCTaGCTACTCCCCTGGCCTCACAGCCACCCGCCTCGGACGGAGCGC +
Preference number: 5 (lower is better)
Translates to: PSPATRQLGRISLGA*LLPWPHSHPPRTER
Trigger: GCGCTCCGTCCGAGGCGGGTGGCTGTGAGGCCAGGGGAGTAGGCAGGCTCCCAGAGAGATTCTTCCAAGTTGGCGGGTGGCGGGAGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS TCA 90 bp GATGCCGGCGTGCACGGCAAGCGCGAATTCGGAACCTGGCGCCCTTaGCCAAGCCTGAGATCGGAAAGGGGGCATCGCCCAGGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: DAGVHGKREFGTWRP*PSLRSERGHRPGPA
Trigger: CGCTGGCCCTGGGCGATGCCCCCTTTCCGATCTCAGGCTTGGTCAAGGGCGCCAGGTTCCGAATTCGCGCTTGCCGTGCACGCCGGCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS GCA 90 bp AACTTTCTAAACAGGAAACGTGCAGCCTGGCTCGCGCCCCTGCCGTaGCAGTGCGCGGCACGCGTCCCAGAGCACGAGGCTCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: NFLNRKRAAWLAPLP*QCAARVPEHEAPPR
Trigger: CCGGGGAGGAGCCTCGTGCTCTGGGACGCGTGCCGCGCACTGGCACGGCAGGGGCGCGAGCCAGGCTGCACGTTTCCTGTTTAGAAAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396700.5
CDS GCA 90 bp GAATCTACTCCAGCCACGTTGCCCGGCGGTGTTGGTGAGGCTCGATaGCGGCGTGCACGGCAAGCGCGAATTCGGAACCTGGCGCCCTTG +
Preference number: 5 (lower is better)
Translates to: ESTPATLPGGVGEAR*RRARQARIRNLAPL
Trigger: CAAGGGCGCCAGGTTCCGAATTCGCGCTTGCCGTGCACGCCGGCATCGAGCCTCACCAACACCGCCGGGCAACGTGGCTGGAGTAGATTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS CCA 90 bp GTTCTGCGGCTTGCCCAATACTGCCCGCACAACGGGTCCCAGGGTTaGAGAGAACCAGGGACACGAGTCCCTCTCTGCGCGCACAAAGCA +
Preference number: 5 (lower is better)
Translates to: VLRLAQYCPHNGSQG*REPGTRVPLCAHKA
Trigger: TGCTTTGTGCGCGCAGAGAGGGACTCGTGTCCCTGGTTCTCTCCAACCCTGGGACCCGTTGTGCGGGCAGTATTGGGCAAGCCGCAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS GCA 90 bp AACTTTCTCGGAGGAAATCGCTCCGTTCTGCGGCTTGCCCAATACTaGCCGCACAACGGGTCCCAGGGTTGGAGAGAACCAGGGACACGA +
Preference number: 5 (lower is better)
Translates to: NFLGGNRSVLRLAQY*PHNGSQGWREPGTR
Trigger: TCGTGTCCCTGGTTCTCTCCAACCCTGGGACCCGTTGTGCGGGCAGTATTGGGCAAGCCGCAGAACGGAGCGATTTCCTCCGAGAAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS GCA 90 bp CTCCATCCTCAACTTTCTCGGAGGAAATCGCTCCGTTCTGCGGCTTaGCCAATACTGCCCGCACAACGGGTCCCAGGGTTGGAGAGAACC +
Preference number: 5 (lower is better)
Translates to: LHPQLSRRKSLRSAA*PILPAQRVPGLERT
Trigger: GGTTCTCTCCAACCCTGGGACCCGTTGTGCGGGCAGTATTGGGCAAGCCGCAGAACGGAGCGATTTCCTCCGAGAAAGTTGAGGATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS TCA 90 bp CAGAAACTGGCTCAGCTGACCCACAGTGACCAGACTCCGGCAGGGTaGGTATCCTGTAAGAGGAAGGCAGGTCACACTGCAGAAAGGCCG +
Preference number: 5 (lower is better)
Translates to: QKLAQLTHSDQTPAG*VSCKRKAGHTAERP
Trigger: CGGCCTTTCTGCAGTGTGACCTGCCTTCCTCTTACAGGATACTCACCCTGCCGGAGTCTGGTCACTGTGGGTCAGCTGAGCCAGTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548369.1
CDS-3UTR CAA 90 bp AAGGCAGGAGTCATCCACTTAGAGCTGGATCCCCAGCTGGACCTGAGCGTGAGCCCCCGAAAGGTCACCTaGTGCGCAGTTTCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: KAGVIHLELDPQLDLSVSPRKVT*CAVSAN
Trigger: GTTTGCAGAAACTGCGCACAAGGTGACCTTTCGGGG...GCTCACGCTCAGGTCCAGCTGGGGATCCAGCTCTAAGTGGATGACTCCTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp TCTCCTCTGCTCGGCCTAATCGCTCTCCACGCTCATTCAAGGCCTGGCTTGCCTAGCTGCCACCTGGCATaGCCATTTTCAGCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: SPLLGLIALHAHSRPGLPSCHLA*PFSAQD
Trigger: GTCCTGAGCTGAAAATGGCAATGCCAGGTGGCAGCT...AGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCGAGCAGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS GCA 90 bp AAAAAGGCTCCATCCTCAACTTTCTCGGAGGAAATCGCTCCGTTCTaGGGCTTGCCCAATACTGCCCGCACAACGGGTCCCAGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: KKAPSSTFSEEIAPF*GLPNTARTTGPRVG
Trigger: TCCAACCCTGGGACCCGTTGTGCGGGCAGTATTGGGCAAGCCGCAGAACGGAGCGATTTCCTCCGAGAAAGTTGAGGATGGAGCCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS CCA 90 bp GCTCTCCACGCTCATTCAAGGCCTGGCTTGCCTTCTGCACTGCGCTaGTCACGCTGTCAGCAGCTGAATGGAGGATGCTGTTTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: ALHAHSRPGLPSALR*SRCQQLNGGCCFLK
Trigger: TTTCAGGAAACAGCATCCTCCATTCAGCTGCTGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548369.1
CDS-3UTR CAA 90 bp TCTCCTCTGCTCGGCCTAATCGCTCTCCACGCTCATTCAAGGCCTGGCTTGCCTTTCTTTGTCCTCCTCTaGACTTGGACAGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: SPLLGLIALHAHSRPGLPFFVLL*TWTAPS
Trigger: GCTGGGAGCTGTCCAAGTCAAGAGGAGGACAAAGAA...AGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCGAGCAGAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp CTGGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTCATTCAAGGCCTGGCTaGCCTTCTGCACTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: LDSTKVCQTLQLGFGTLIHSRPG*PSALRW
Trigger: CCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATG...AATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp TCTCCTCTGCTCGGCCTAATCGCTCTCCACGCTCATTCAAGGCCTGGCTTGCCTTATCCAATCCAGTGTTaGTACAGCCCCCTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SPLLGLIALHAHSRPGLPYPIQC*YSPLWE
Trigger: CTCCCAGAGGGGGCTGTACAAACACTGGATTGGATA...AGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCGAGCAGAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS CCA 90 bp TGGCTTGCCTTCTGCACTGCGCTGGTCACGCTGTCAGCAGCTGAATaGAGGATGCTGTTTCCTGAAAGGAGGAGAGCAGGAGCATCAGAA +
Preference number: 5 (lower is better)
Translates to: WLAFCTALVTLSAAE*RMLFPERRRAGASE
Trigger: TTCTGATGCTCCTGCTCTCCTCCTTTCAGGAAACAGCATCCTCCATTCAGCTGCTGACAGCGTGACCAGCGCAGTGCAGAAGGCAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548369.1
CDS-3UTR CAA 90 bp AAGGCAGGAGTCATCCACTTAGAGCTGGATCCCCAGCTGGACCTGAGCGTGAGCGAGCCTTCAAACTGTTaGACCTTTGTGATGGACGCC +
Preference number: 5 (lower is better)
Translates to: KAGVIHLELDPQLDLSVSEPSNC*TFVMDA
Trigger: GGCGTCCATCACAAAGGTCAAACAGTTTGAAGGCTC...GCTCACGCTCAGGTCCAGCTGGGGATCCAGCTCTAAGTGGATGACTCCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp CAGCTTCATGGTCAGCCTATGCTAGCAGGTCCAAATCAAGAGTCCTGGTCCCTGTGTCCTCCTCTTGACTaGGACAGCTCCCAGCATCCT +
Preference number: 5 (lower is better)
Translates to: QLHGQPMLAGPNQESWSLCPPLD*DSSQHP
Trigger: AGGATGCTGGGAGCTGTCCAAGTCAAGAGGAGGACA...CAGGGACCAGGACTCTTGATTTGGACCTGCTAGCATAGGCTGACCATGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp ATCCAGTGTTTGTACAGCCCCCTCTGGGAGGGACGCCTACGTGGACGACATCCAAATTGCCTCGCAAACTaGGCCACAGTATCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: IQCLYSPLWEGRLRGRHPNCLAN*ATVSGK
Trigger: TTTCCCTGATACTGTGGCCAAGTTTGCGAGGCAATT...TGGATGTCGTCCACGTAGGCGTCCCTCCCAGAGGGGGCTGTACAAACACTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp TCCTTGAAGGAACTCGAAATGGGCCCCACGGGCAACAGTGCAGTAAGACCCTGTTTCCCTGTCCCTGTGTaGAGGATCCTCAATCACCAG +
Preference number: 5 (lower is better)
Translates to: SLKELEMGPTGNSAVRPCFPVPV*RILNHQ
Trigger: CTGGTGATTGAGGATCCTCAACACAGGGACAGGGAA...ACAGGGTCTTACTGCACTGTTGCCCGTGGGGCCCATTTCGAGTTCCTTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS TCA 90 bp AGTAATGATTTTCCTAGAAGATGCCAGAGTTCGCGAAGATCGGAGTaGTTCGCGGATTTCTGCGCTCAAGCTAGAGGCGCAGCGACCCCG +
Preference number: 5 (lower is better)
Translates to: SNDFPRRCQSSRRSE*FADFCAQARGAATP
Trigger: CGGGGTCGCTGCGCCTCTAGCTTGAGCGCAGAAATCCGCGAATCACTCCGATCTTCGCGAACTCTGGCATCTTCTAGGAAAATCATTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS CCA 90 bp CATTTGTGCTTCATGGCAAGCTTGTGCGCAGTTTCTGCAAACTGCTaGGCGCTGTTCTTCAGGTCTTCTGTCTTCTCCTCTGCTCGGCCT +
Preference number: 5 (lower is better)
Translates to: HLCFMASLCAVSANC*ALFFRSSVFSSARP
Trigger: AGGCCGAGCAGAGGAGAAGACAGAAGACCTGAAGAACAGCGCCCAGCAGTTTGCAGAAACTGCGCACAAGCTTGCCATGAAGCACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR CAA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCGTTGCCCGGCGGTGTaGGTGAGGCTCGATGCCGGC +
Preference number: 5 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLRCPAV*VRLDAG
Trigger: GCCGGCATCGAGCCTCACCAACACCGCCGGGCAACG...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR CAA 90 bp ATCCAGTGTTTGTACAGCCCCCTCTGGGAGGGACGCCTACGTGGACGACATCCATTAGGTTATCCATCCTaGTTTCCTCAGCAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: IQCLYSPLWEGRLRGRHPLGYPS*FPQQKW
Trigger: CCACTTCTGCTGAGGAAACAAGGATGGATAACCTAA...TGGATGTCGTCCACGTAGGCGTCCCTCCCAGAGGGGGCTGTACAAACACTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp CTCTGGCTTCCTGTCCGTGAGGTACCTCTGGCAGGTATGGTGGAGGATCTGGAAGTGTGGGTTTCTTGTTaGTCACTTTTTCAGTCCACC +
Preference number: 5 (lower is better)
Translates to: LWLPVREVPLAGMVEDLEVWVSC*SLFQST
Trigger: GGTGGACTGAAAAAGTGACAAACAAGAAACCCACAC...TTCCAGATCCTCCACCATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp ATCCAGTGTTTGTACAGCCCCCTCTGGGAGGGACGCCTACGTGGACGACATCCATTGCTGATAGCAGATTaGGCACTCATTGTAGAACAA +
Preference number: 5 (lower is better)
Translates to: IQCLYSPLWEGRLRGRHPLLIAD*ALIVEQ
Trigger: TTGTTCTACAATGAGTGCCAAATCTGCTATCAGCAA...TGGATGTCGTCCACGTAGGCGTCCCTCCCAGAGGGGGCTGTACAAACACTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp AATGAGATGACAAGACAGCGCTGTGCAAAGGGGATGCAGGAAGAGAAGGCAGGATTCCTGAGGTTAACTTaGCATGAAGCCCGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: NEMTRQRCAKGMQEEKAGFLRLT*HEARSS
Trigger: TGAGCTCCGGGCTTCATGCAAAGTTAACCTCAGGAA...TCCTGCCTTCTCTTCCTGCATCCCCTTTGCACAGCGCTGTCTTGTCATCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp AATGAGATGACAAGACAGCGCTGTGCAAAGGGGATGCAGGAAGAGAAGGCAGGAGATCTGTTTCTGCGATaGTGGTGCACTTTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: NEMTRQRCAKGMQEEKAGDLFLR*WCTFLR
Trigger: CCTCAGGAAAGTGCACCACAATCGCAGAAACAGATC...TCCTGCCTTCTCTTCCTGCATCCCCTTTGCACAGCGCTGTCTTGTCATCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp AATGAGATGACAAGACAGCGCTGTGCAAAGGGGATGCAGGAAGAGAAGGCAGGACGCCTTGACCTCCAGTaGCCAAGAAAGGAATCTTTT +
Preference number: 5 (lower is better)
Translates to: NEMTRQRCAKGMQEEKAGRLDLQ*PRKESF
Trigger: AAAAGATTCCTTTCTTGGCAACTGGAGGTCAAGGCG...TCCTGCCTTCTCTTCCTGCATCCCCTTTGCACAGCGCTGTCTTGTCATCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp AACCTCCAAAATCCAGATACCAAGAAACTAAAGGCCCTCTCCCAAGGACATTATTTACGGCCCTCTCTGTaGTGGGGAGGCCTAGGTAGG +
Preference number: 5 (lower is better)
Translates to: NLQNPDTKKLKALSQGHYLRPSL*WGGLGR
Trigger: CCTACCTAGGCCTCCCCACAACAGAGAGGGCCGTAA...ATAATGTCCTTGGGAGAGGGCCTTTAGTTTCTTGGTATCTGGATTTTGGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTAAGGAGGGGCAGGGATaGCTGTTACGGCCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTKEGQG*LLRPSL
Trigger: CAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp CGAATCCCCATTAGGATCGATACCATTAACCTGGCGAAGCTGCTCGAGCATCCATCACGGAAGCTGCTGTaGTTGTTAAAGAAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: RIPIRIDTINLAKLLEHPSRKLL*LLKKLR
Trigger: CCTCAGCTTCTTTAACAACAACAGCAGCTTCCGTGA...TGGATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGATCCTAATGGGGATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp GTGTTTCTGTTAAAGCCAGTTATTTTCTTCCCCGAAAGGTCACCTTGTGCGCAGGGGGCCGTCAAAGCATaGCGTCTGCTGCAACATTGT +
Preference number: 5 (lower is better)
Translates to: VFLLKPVIFFPERSPCAQGAVKA*RLLQHC
Trigger: ACAATGTTGCAGCAGACGCAATGCTTTGACGGCCCC...CTGCGCACAAGGTGACCTTTCGGGGAAGAAAATAACTGGCTTTAACAGAAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS TCA 90 bp CGTCTAGTGTCTAGGAAACAAGCCGACATTTCTTTTGATTGGGTTTaGCTGACGCACTTGCAGCAAGAACACCCACTGACTGCAGGACCT +
Preference number: 5 (lower is better)
Translates to: RLVSRKQADISFDWV*LTHLQQEHPLTAGP
Trigger: AGGTCCTGCAGTCAGTGGGTGTTCTTGCTGCAAGTGCGTCAGTCAAACCCAATCAAAAGAAATGTCGGCTTGTTTCCTAGACACTAGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548369.1
CDS-3UTR CAA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTACATTCAAGGCCTGGCTaGCCTTCTGCACTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLHSRPG*PSALRW
Trigger: CCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATG...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR CAA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTACCGCCACCCGCCAACTaGGAAGAATCTCTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLPPPAN*EESLWE
Trigger: CTCCCAGAGAGATTCTTCCAAGTTGGCGGGTGGCGG...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR CAA 90 bp GTGTTTCTGTTAAAGCCAGTTATTTTCTTCCCCGAAAGGTCACCTTGTGCGCAGCACACCCCTTTCCCTTaGGGTTTGGGAGGCACAAAA +
Preference number: 5 (lower is better)
Translates to: VFLLKPVIFFPERSPCAQHTPFP*GLGGTK
Trigger: TTTTGTGCCTCCCAAACCCAAAGGGAAAGGGGTGTG...CTGCGCACAAGGTGACCTTTCGGGGAAGAAAATAACTGGCTTTAACAGAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAAGGCAGGTGGGTCACTaGAGCCCGGGAGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKRQVGH*SPGGRG
Trigger: GCCTCTGCCTCCCGGGCTCAAGTGACCCACCTGCCT...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550887.5
CDS-3UTR CAA 90 bp AATAGCTTCCAACGGTACTCACCAAATGGCATGTTCCTCGCTTCTTTAAATTTTAAGGAGGGGCAGGGATaGCTGTTACGGCCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: NSFQRYSPNGMFLASLNFKEGQG*LLRPSL
Trigger: CAGAGAGGGCCGTAACAGCAATCCCTGCCCCTCCTT...AAAATTTAAAGAAGCGAGGAACATGCCATTTGGTGAGTACCGTTGGAAGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCAGCTCCGTTCTGCGGCTaGCCCAATACTGCCCGCACA +
Preference number: 5 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISAPFCG*PNTART
Trigger: TGTGCGGGCAGTATTGGGCAAGCCGCAGAACGGAGC...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR CAA 90 bp AATGAGATGACAAGACAGCGCTGTGCAAAGGGGATGCAGGAAGAGAAGGCAGGATCCTTTGAAGCTGACTaGATATCTGACAGGCAGATA +
Preference number: 5 (lower is better)
Translates to: NEMTRQRCAKGMQEEKAGSFEAD*ISDRQI
Trigger: TATCTGCCTGTCAGATATCAAGTCAGCTTCAAAGGA...TCCTGCCTTCTCTTCCTGCATCCCCTTTGCACAGCGCTGTCTTGTCATCTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp TGCTCGAGCATCCACTGTGATCTCCGAACAAATGATGTGGAGCCTTCAAACTGTTCTAGCCAATTCTCCTaGAAGGAACTCGAAATGGGC +
Preference number: 5 (lower is better)
Translates to: CSSIHCDLRTNDVEPSNCSSQFS*KELEMG
Trigger: GCCCATTTCGAGTTCCTTCAAGGAGAATTGGCTAGA...ACAGTTTGAAGGCTCCACATCATTTGTTCGGAGATCACAGTGGATGCTCGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp TGCTCGAGCATCCACTGTGATCTCCGAACAAATGATGTGGAGCCTTCAAACTGTCCTTTCCCTTTGGGTTaGGGAGGCACAAAATCTTCT +
Preference number: 5 (lower is better)
Translates to: CSSIHCDLRTNDVEPSNCPFPLG*GGTKSS
Trigger: AGAAGATTTTGTGCCTCCCAAACCCAAAGGGAAAGG...ACAGTTTGAAGGCTCCACATCATTTGTTCGGAGATCACAGTGGATGCTCGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp ACACCTTATCTAAAGAGGTCAATCTGCTTGTTAGGAATACTGCCAGTGCCAGTGGAGACCCCTTTGCCTTaGGTGGCCGCATTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: TPYLKRSICLLGILPVPVETPLP*VAALVS
Trigger: AGAAACTAATGCGGCCACCAAAGGCAAAGGGGTCTC...CACTGGCACTGGCAGTATTCCTAACAAGCAGATTGACCTCTTTAGATAAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp TGCTCGAGCATCCACTGTGATCTCCGAACAAATGATGTGGAGCCTTCAAACTGTTGCAAAAGTGATCCATaGACTCTTGCACCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: CSSIHCDLRTNDVEPSNCCKSDP*TLAPGS
Trigger: TGACCCAGGTGCAAGAGTCAATGGATCACTTTTGCA...ACAGTTTGAAGGCTCCACATCATTTGTTCGGAGATCACAGTGGATGCTCGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp GGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTCAATTTTGAAGTCAGGGTaGTGCAAAAGTGATCCATTG +
Preference number: 5 (lower is better)
Translates to: GLYKGVPNSPAGVRHPYSILKSG*CKSDPL
Trigger: CAATGGATCACTTTTGCACAACCCTGACTTCAAAAT...TGAATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp CAAGGGAAAGTGAGCAGATCTGTTTCTGCGATTGTGGTGCACTTTCCTGAGGTTGCAACATTGTGCTTTTaGGCAAGGGAAAGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: QGKVSRSVSAIVVHFPEVATLCF*ARESEQ
Trigger: CTGCTCACTTTCCCTTGCCAAAAAGCACAATGTTGC...AACCTCAGGAAAGTGCACCACAATCGCAGAAACAGATCTGCTCACTTTCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCACATTCAAGGCCTGGCTaGCCTTCTGCACTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISHSRPG*PSALRW
Trigger: CCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATG...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCCATTCAAGGCCTGGCTaGCCTTCTGCACTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGHSRPG*PSALRW
Trigger: CCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATG...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AACCTCCAAAATCCAGATACCAAGAAACTAAAGGCCCTCTCCCAAGGACATTATGGCCTAGGTAGGACTTaGACACTGAGAGGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: NLQNPDTKKLKALSQGHYGLGRT*TLRGQR
Trigger: CCTTTGACCTCTCAGTGTCAAAGTCCTACCTAGGCC...ATAATGTCCTTGGGAGAGGGCCTTTAGTTTCTTGGTATCTGGATTTTGGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCTTACGGCCCTCTCTGTaGTGGGGAGGCCTAGGTAGG +
Preference number: 5 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGLRPSL*WGGLGR
Trigger: CCTACCTAGGCCTCCCCACAACAGAGAGGGCCGTAA...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAACGGAACCTGGCGCCCTaGACCAAGCCTGAGATCGGA +
Preference number: 5 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKRNLAP*TKPEIG
Trigger: TCCGATCTCAGGCTTGGTCAAGGGCGCCAGGTTCCG...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR CAA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAATCTACTCCAGCCACGTaGCCCGGCGGTGTTGGTGAG +
Preference number: 5 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKSTPAT*PGGVGE
Trigger: CTCACCAACACCGCCGGGCAACGTGGCTGGAGTAGA...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS-3UTR CAA 90 bp GGACTCTACAAAGGTGTGCCAAACTCTCCAGCTGGGGTTCGGCACCCTTATTCAATTTTACAATCTTCCTaGGTAACCTGGTTCATGGTT +
Preference number: 5 (lower is better)
Translates to: GLYKGVPNSPAGVRHPYSILQSS*VTWFMV
Trigger: AACCATGAACCAGGTTACCAAGGAAGATTGTAAAAT...TGAATAAGGGTGCCGAACCCCAGCTGGAGAGTTTGGCACACCTTTGTAGAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS GCA 90 bp CCTCCTCTTGACTTGGACAGCTCCCAGCATCCTTTCATCAAGAGGTaGAAAAATTTCCTTGCTGATAGCAGATTTGGCACTCATTGTAGA +
Preference number: 5 (lower is better)
Translates to: PPLDLDSSQHPFIKR*KNFLADSRFGTHCR
Trigger: TCTACAATGAGTGCCAAATCTGCTATCAGCAAGGAAATTTTTGCACCTCTTGATGAAAGGATGCTGGGAGCTGTCCAAGTCAAGAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548182.1
ENST00000550887.5
CDS-3UTR CAA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTTTCTTTGTCCTCCTCTaGACTTGGACAGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLFFVLL*TWTAPS
Trigger: GCTGGGAGCTGTCCAAGTCAAGAGGAGGACAAAGAA...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp ATGACAGTGACAAGAGAAACATCTGTGAGTACACAGAGGGTTTTAGGTAGGCTTGAGCCTTCAAACTGTTaGACCTTTGTGATGGACGCC +
Preference number: 5 (lower is better)
Translates to: MTVTRETSVSTQRVLGRLEPSNC*TFVMDA
Trigger: GGCGTCCATCACAAAGGTCAAACAGTTTGAAGGCTC...AAGCCTACCTAAAACCCTCTGTGTACTCACAGATGTTTCTCTTGTCACTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp GGACAGCAAAGAACTTCACATGTGTTATCACTGGGCTCCTCTGCAAGAGGCTGGTCCCATAATTTTGGATaGGCAGTTAATAAACTCTGG +
Preference number: 5 (lower is better)
Translates to: GQQRTSHVLSLGSSARGWSHNFG*AVNKLW
Trigger: CCAGAGTTTATTAACTGCCAATCCAAAATTATGGGA...CCAGCCTCTTGCAGAGGAGCCCAGTGATAACACATGTGAAGTTCTTTGCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp TTCTTGAATTTGGCGGACTGTCAGGGGGTTTTAGATTTATCCTTTCAATTATTTCATTCAAGGCCTGGCTaGCCTTCTGCACTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: FLNLADCQGVLDLSFQLFHSRPG*PSALRW
Trigger: CCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATG...AAATAATTGAAAGGATAAATCTAAAACCCCCTGACAGTCCGCCAAATTCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAACATTCAAGGCCTGGCTaGCCTTCTGCACTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKHSRPG*PSALRW
Trigger: CCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATG...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCATTCAAGGCCTGGCTaGCCTTCTGCACTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRHSRPG*PSALRW
Trigger: CCAGCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATG...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AACCTCCAAAATCCAGATACCAAGAAACTAAAGGCCCTCTCCCAAGGACATTATTGCTTCATGGCAAGCTaGTGCGCAGTTTCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: NLQNPDTKKLKALSQGHYCFMAS*CAVSAN
Trigger: GTTTGCAGAAACTGCGCACAAGCTTGCCATGAAGCA...ATAATGTCCTTGGGAGAGGGCCTTTAGTTTCTTGGTATCTGGATTTTGGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTCTTCTGTTCTTGAATTaGGCGGACTGTCAGGGGGTT +
Preference number: 5 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTLLFLN*ADCQGV
Trigger: AACCCCCTGACAGTCCGCCAAATTCAAGAACAGAAG...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp CGAATCCCCATTAGGATCGATACCATTAACCTGGCGAAGCTGCTCGAGCATCCATTTATCAGTGCACTATaGATTGCTCTATTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: RIPIRIDTINLAKLLEHPFISAL*IALFCV
Trigger: CACACAGAATAGAGCAATCAATAGTGCACTGATAAA...TGGATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGATCCTAATGGGGATTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp TTCCCTGTCCCTGTGTTGAGGATCCTCAATCACCAGTATCAATTCTCCAATCCCAACTACTATTCCATATaGCTTTCCCAATTGCCTCGC +
Preference number: 5 (lower is better)
Translates to: FPVPVLRILNHQYQFSNPNYYSI*LSQLPR
Trigger: GCGAGGCAATTGGGAAAGCAATATGGAATAGTAGTT...GGGATTGGAGAATTGATACTGGTGATTGAGGATCCTCAACACAGGGACAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp TCCTCTACCCAACTCAACAACTTAAATGTTTCCCCAGATTTCCACTATCCGTCTGCGTCTGCTGCAACATaGTGCTTTTTGGCAAGGGAA +
Preference number: 5 (lower is better)
Translates to: SSTQLNNLNVSPDFHYPSASAAT*CFLARE
Trigger: TTCCCTTGCCAAAAAGCACAATGTTGCAGCAGACGC...AGACGGATAGTGGAAATCTGGGGAAACATTTAAGTTGTTGAGTTGGGTAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS GCA 90 bp GTAGAACAAGTGAGGACAGCACGCAGTGAATTCATTCAATATCACTaGATTGTCCTAACGCTGAGGATACTGAGGAGAAGAAGAGCAACA +
Preference number: 5 (lower is better)
Translates to: VEQVRTARSEFIQYH*IVLTLRILRRRRAT
Trigger: TGTTGCTCTTCTTCTCCTCAGTATCCTCAGCGTTAGGACAATGCAGTGATATTGAATGAATTCACTGCGTGCTGTCCTCACTTGTTCTAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS CCA 90 bp CCAGTTGCCAAGAAAGGAATCTTTTTCTTTGTCCTCCTCTTGACTTaGACAGCTCCCAGCATCCTTTCATCAAGAGGTGCAAAAATTTCC +
Preference number: 5 (lower is better)
Translates to: PVAKKGIFFFVLLLT*TAPSILSSRGAKIS
Trigger: GGAAATTTTTGCACCTCTTGATGAAAGGATGCTGGGAGCTGTCCAAGTCAAGAGGAGGACAAAGAAAAAGATTCCTTTCTTGGCAACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548182.1
ENST00000550887.5
CDS-3UTR CAA 90 bp ACCTGGGTCACTGCAGGAGTCCTGGAACAAGTTAGAAGGCCAAGTTATTTTCTAGGTGCAAAAATTTCCTaGCTGATAGCAGATTTGGCA +
Preference number: 5 (lower is better)
Translates to: TWVTAGVLEQVRRPSYFLGAKIS*LIADLA
Trigger: TGCCAAATCTGCTATCAGCAAGGAAATTTTTGCACC...TAGAAAATAACTTGGCCTTCTAACTTGTTCCAGGACTCCTGCAGTGACCCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATGTCCTCCTCTTGACTaGGACAGCTCCCAGCATCCT +
Preference number: 5 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISCPPLD*DSSQHP
Trigger: AGGATGCTGGGAGCTGTCCAAGTCAAGAGGAGGACA...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCTGTCCTCCTCTTGACTaGGACAGCTCCCAGCATCCT +
Preference number: 5 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGCPPLD*DSSQHP
Trigger: AGGATGCTGGGAGCTGTCCAAGTCAAGAGGAGGACA...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTTGTCCTCCTCTTGACTaGGACAGCTCCCAGCATCCT +
Preference number: 5 (lower is better)
Translates to: HVASLDSAQFIIWSKFHICPPLD*DSSQHP
Trigger: AGGATGCTGGGAGCTGTCCAAGTCAAGAGGAGGACA...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AATAGCTTCCAACGGTACTCACCAAATGGCATGTTCCTCGCTTCTTTAAATTTTGCCTGTGTGGGTTTCTaGTTTGTCACTGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: NSFQRYSPNGMFLASLNFACVGF*FVTDRQ
Trigger: CTGCCTGTCAGTGACAAACAAGAAACCCACACAGGC...AAAATTTAAAGAAGCGAGGAACATGCCATTTGGTGAGTACCGTTGGAAGCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTGAGCCTTCAAACTGTTaGACCTTTGTGATGGACGCC +
Preference number: 5 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLEPSNC*TFVMDA
Trigger: GGCGTCCATCACAAAGGTCAAACAGTTTGAAGGCTC...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTATGCTTCATGGCAAGCTaGTGCGCAGTTTCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLCFMAS*CAVSAN
Trigger: GTTTGCAGAAACTGCGCACAAGCTTGCCATGAAGCA...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR CAA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTTGCTTCATGGCAAGCTaGTGCGCAGTTTCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLCFMAS*CAVSAN
Trigger: GTTTGCAGAAACTGCGCACAAGCTTGCCATGAAGCA...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR CAA 90 bp ATGACAGTGACAAGAGAAACATCTGTGAGTACACAGAGGGTTTTAGGTAGGCTTCAACCACTTCTGTTCTaGAATTTGGCGGACTGTCAG +
Preference number: 5 (lower is better)
Translates to: MTVTRETSVSTQRVLGRLQPLLF*NLADCQ
Trigger: CTGACAGTCCGCCAAATTCAAGAACAGAAGTGGTTG...AAGCCTACCTAAAACCCTCTGTGTACTCACAGATGTTTCTCTTGTCACTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AATAGCTTCCAACGGTACTCACCAAATGGCATGTTCCTCGCTTCTTTAAATTTTGGCCTAGGTAGGACTTaGACACTGAGAGGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: NSFQRYSPNGMFLASLNFGLGRT*TLRGQR
Trigger: CCTTTGACCTCTCAGTGTCAAAGTCCTACCTAGGCC...AAAATTTAAAGAAGCGAGGAACATGCCATTTGGTGAGTACCGTTGGAAGCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp GCTTTGAACTCATTCAATTCTCTGAACACTCTAGTACGTAGGTACTATTCTCATAAGCCAGAGACCCCTTaGCCTTTGGTGGCCGCATTA +
Preference number: 5 (lower is better)
Translates to: ALNSFNSLNTLVRRYYSHKPETP*PLVAAL
Trigger: TAATGCGGCCACCAAAGGCAAAGGGGTCTCTGGCTT...ATGAGAATAGTACCTACGTACTAGAGTGTTCAGAGAATTGAATGAGTTCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS TCA 90 bp AGCAGATTTGGCACTCATTGTAGAACAAGTGAGGACAGCACGCAGTaGATTCATTCAATATCACTGCATTGTCCTAACGCTGAGGATACT +
Preference number: 5 (lower is better)
Translates to: SRFGTHCRTSEDSTQ*IHSISLHCPNAEDT
Trigger: AGTATCCTCAGCGTTAGGACAATGCAGTGATATTGAATGAATTCACTGCGTGCTGTCCTCACTTGTTCTACAATGAGTGCCAAATCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTTGTCCTCCTCTTGACTaGGACAGCTCCCAGCATCCT +
Preference number: 5 (lower is better)
Translates to: FHLGKITSDVTTLKCLPACPPLD*DSSQHP
Trigger: AGGATGCTGGGAGCTGTCCAAGTCAAGAGGAGGACA...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
CDS-3UTR CAA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAATGTCCTCCTCTTGACTaGGACAGCTCCCAGCATCCT +
Preference number: 5 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKCPPLD*DSSQHP
Trigger: AGGATGCTGGGAGCTGTCCAAGTCAAGAGGAGGACA...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCTTCTTTGTCCTCCTCTaGACTTGGACAGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGFFVLL*TWTAPS
Trigger: GCTGGGAGCTGTCCAAGTCAAGAGGAGGACAAAGAA...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATTCTTTGTCCTCCTCTaGACTTGGACAGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISFFVLL*TWTAPS
Trigger: GCTGGGAGCTGTCCAAGTCAAGAGGAGGACAAAGAA...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTTTCTTTGTCCTCCTCTaGACTTGGACAGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIFFVLL*TWTAPS
Trigger: GCTGGGAGCTGTCCAAGTCAAGAGGAGGACAAAGAA...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTACGCCTTGACCTCCAGTaGCCAAGAAAGGAATCTTTT +
Preference number: 5 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLRLDLQ*PRKESF
Trigger: AAAAGATTCCTTTCTTGGCAACTGGAGGTCAAGGCG...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCGCCTGTGTGGGTTTCTaGTTTGTCACTGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGACVGF*FVTDRQ
Trigger: CTGCCTGTCAGTGACAAACAAGAAACCCACACAGGC...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCAGCCTGTGTGGGTTTCTaGTTTGTCACTGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISACVGF*FVTDRQ
Trigger: CTGCCTGTCAGTGACAAACAAGAAACCCACACAGGC...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AATAGCTTCCAACGGTACTCACCAAATGGCATGTTCCTCGCTTCTTTAAATTTTGAGCCTTCAAACTGTTaGACCTTTGTGATGGACGCC +
Preference number: 5 (lower is better)
Translates to: NSFQRYSPNGMFLASLNFEPSNC*TFVMDA
Trigger: GGCGTCCATCACAAAGGTCAAACAGTTTGAAGGCTC...AAAATTTAAAGAAGCGAGGAACATGCCATTTGGTGAGTACCGTTGGAAGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTGCAGTTTCTCAACATTaGTGCTTCATGGCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTAVSQH*CFMASL
Trigger: CAAGCTTGCCATGAAGCACAAATGTTGAGAAACTGC...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTGCTTCCCAAACATTGTaGTTAGAGAGTTGGCAACCA +
Preference number: 5 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTASQTL*LESWQP
Trigger: TGGTTGCCAACTCTCTAACAACAATGTTTGGGAAGC...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp TGGCCTTTTCTTAAACTGAATTTCTTAGCAGACACGCTGGGATGTTCAACCATAGTGTGGGTAATGCTCTaGTCTACTGACTCACTGACT +
Preference number: 5 (lower is better)
Translates to: WPFLKLNFLADTLGCSTIVWVML*STDSLT
Trigger: AGTCAGTGAGTCAGTAGACAAGAGCATTACCCACAC...TATGGTTGAACATCCCAGCGTGTCTGCTAAGAAATTCAGTTTAAGAAAAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp AATAGCTTCCAACGGTACTCACCAAATGGCATGTTCCTCGCTTCTTTAAATTTTCGCCTTGACCTCCAGTaGCCAAGAAAGGAATCTTTT +
Preference number: 5 (lower is better)
Translates to: NSFQRYSPNGMFLASLNFRLDLQ*PRKESF
Trigger: AAAAGATTCCTTTCTTGGCAACTGGAGGTCAAGGCG...AAAATTTAAAGAAGCGAGGAACATGCCATTTGGTGAGTACCGTTGGAAGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGGCCTGTGTGGGTTTCTaGTTTGTCACTGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRACVGF*FVTDRQ
Trigger: CTGCCTGTCAGTGACAAACAAGAAACCCACACAGGC...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTAGCAGTTTCTCAACATTaGTGCTTCATGGCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLAVSQH*CFMASL
Trigger: CAAGCTTGCCATGAAGCACAAATGTTGAGAAACTGC...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS-3UTR CAA 90 bp ATGACAGTGACAAGAGAAACATCTGTGAGTACACAGAGGGTTTTAGGTAGGCTTTCTGAGATGTGCAGCTaGTCTCCTAGTTTCACAAAA +
Preference number: 5 (lower is better)
Translates to: MTVTRETSVSTQRVLGRLSEMCS*SPSFTK
Trigger: TTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGA...AAGCCTACCTAAAACCCTCTGTGTACTCACAGATGTTTCTCTTGTCACTGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp ACCGTATTAATACTTTGCACTGCAGCACCTTCTACAAGAGGACAGCAAAGAACTTCAGCTTCCCAAACATaGTTGTTAGAGAGTTGGCAA +
Preference number: 5 (lower is better)
Translates to: TVLILCTAAPSTRGQQRTSASQT*LLESWQ
Trigger: TTGCCAACTCTCTAACAACAATGTTTGGGAAGCTGA...AGTTCTTTGCTGTCCTCTTGTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTTCATCCTCAGCTACTTaGGAATCAGCTTCCCAAACA +
Preference number: 5 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLSSSAT*ESASQT
Trigger: TGTTTGGGAAGCTGATTCCAAAGTAGCTGAGGATGA...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTGACCGTATTAATACTTaGCACTGCAGCACCTTCTAC +
Preference number: 5 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLDRINT*HCSTFY
Trigger: GTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGTC...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp GACAGCGCTATATTCAAACACAAGATGTTAACTACTATTCCATATTGCTTTCCCCGGAAGCTGCTGTTGTaGTTAAAGAAGCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: DSAIFKHKMLTTIPYCFPRKLLL*LKKLRL
Trigger: CAGCCTCAGCTTCTTTAACAACAACAGCAGCTTCCG...GGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATATAGCGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp AAAAGAAGCAAGCGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTGGTGCAAAAATTTCCTaGCTGATAGCAGATTTGGCA +
Preference number: 5 (lower is better)
Translates to: KRSKRRSRILVKTAEQTLGAKIS*LIADLA
Trigger: TGCCAAATCTGCTATCAGCAAGGAAATTTTTGCACC...AAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCGCTTGCTTCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp GAGAAGTGCAGAAATGAAACAAATGAAATGTCTTCTGACAAGCTCAACCAAACTCGCCTTGACCTCCAGTaGCCAAGAAAGGAATCTTTT +
Preference number: 5 (lower is better)
Translates to: EKCRNETNEMSSDKLNQTRLDLQ*PRKESF
Trigger: AAAAGATTCCTTTCTTGGCAACTGGAGGTCAAGGCG...AGTTTGGTTGAGCTTGTCAGAAGACATTTCATTTGTTTCATTTCTGCACTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTCGCCTTGACCTCCAGTaGCCAAGAAAGGAATCTTTT +
Preference number: 5 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIRLDLQ*PRKESF
Trigger: AAAAGATTCCTTTCTTGGCAACTGGAGGTCAAGGCG...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCACGCCTTGACCTCCAGTaGCCAAGAAAGGAATCTTTT +
Preference number: 5 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISRLDLQ*PRKESF
Trigger: AAAAGATTCCTTTCTTGGCAACTGGAGGTCAAGGCG...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp TTTAATGTGCACCATCTGATATTTTTACCCCCAGTAGACAAACTTTCTCTCTCCGTGTGGGTTTCTTGTTaGTCACTGACAGGCAGATAT +
Preference number: 5 (lower is better)
Translates to: FNVHHLIFLPPVDKLSLSVWVSC*SLTGRY
Trigger: ATATCTGCCTGTCAGTGACAAACAAGAAACCCACAC...GGAGAGAGAAAGTTTGTCTACTGGGGGTAAAAATATCAGATGGTGCACATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGGAGCCTTCAAACTGTTaGACCTTTGTGATGGACGCC +
Preference number: 5 (lower is better)
Translates to: KENIFKTYIYTHTHSGRREPSNC*TFVMDA
Trigger: GGCGTCCATCACAAAGGTCAAACAGTTTGAAGGCTC...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTGAGCCTTCAAACTGTTaGACCTTTGTGATGGACGCC +
Preference number: 5 (lower is better)
Translates to: FHLGKITSDVTTLKCLPAEPSNC*TFVMDA
Trigger: GGCGTCCATCACAAAGGTCAAACAGTTTGAAGGCTC...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
CDS-3UTR CAA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAATGCTTCATGGCAAGCTaGTGCGCAGTTTCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKCFMAS*CAVSAN
Trigger: GTTTGCAGAAACTGCGCACAAGCTTGCCATGAAGCA...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTTGCTTCATGGCAAGCTaGTGCGCAGTTTCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: FHLGKITSDVTTLKCLPACFMAS*CAVSAN
Trigger: GTTTGCAGAAACTGCGCACAAGCTTGCCATGAAGCA...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
CDS-3UTR CAA 90 bp TTTAATGTGCACCATCTGATATTTTTACCCCCAGTAGACAAACTTTCTCTCTCCGCAGTTTCTCAACATTaGTGCTTCATGGCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: FNVHHLIFLPPVDKLSLSAVSQH*CFMASL
Trigger: CAAGCTTGCCATGAAGCACAAATGTTGAGAAACTGC...GGAGAGAGAAAGTTTGTCTACTGGGGGTAAAAATATCAGATGGTGCACATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AACCTCCAAAATCCAGATACCAAGAAACTAAAGGCCCTCTCCCAAGGACATTATATTGTTGTTAGAGAGTaGGCAACCACTTCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: NLQNPDTKKLKALSQGHYIVVRE*ATTSVL
Trigger: AAGAACAGAAGTGGTTGCCAACTCTCTAACAACAAT...ATAATGTCCTTGGGAGAGGGCCTTTAGTTTCTTGGTATCTGGATTTTGGAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AATAGCTTCCAACGGTACTCACCAAATGGCATGTTCCTCGCTTCTTTAAATTTTGACCGTATTAATACTTaGCACTGCAGCACCTTCTAC +
Preference number: 5 (lower is better)
Translates to: NSFQRYSPNGMFLASLNFDRINT*HCSTFY
Trigger: GTAGAAGGTGCTGCAGTGCAAAGTATTAATACGGTC...AAAATTTAAAGAAGCGAGGAACATGCCATTTGGTGAGTACCGTTGGAAGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp CGGAGGTCCCGAATTCTTGTAAAAACTGCTGAACAAACTCTTCAGTTTCTCTTATTGCTGATAGCAGATTaGGCACTCATTGTAGAACAA +
Preference number: 5 (lower is better)
Translates to: RRSRILVKTAEQTLQFLLLLIAD*ALIVEQ
Trigger: TTGTTCTACAATGAGTGCCAAATCTGCTATCAGCAA...TAAGAGAAACTGAAGAGTTTGTTCAGCAGTTTTTACAAGAATTCGGGACCTCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCAGTGTGGGTTTCTTGTTaGTCACTGACAGGCAGATAT +
Preference number: 5 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISVWVSC*SLTGRY
Trigger: ATATCTGCCTGTCAGTGACAAACAAGAAACCCACAC...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCGTGTGGGTTTCTTGTTaGTCACTGACAGGCAGATAT +
Preference number: 5 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGVWVSC*SLTGRY
Trigger: ATATCTGCCTGTCAGTGACAAACAAGAAACCCACAC...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp GGTAGGCTTACAATGTGTCTGAGATGTGCAGCTTGTCTCCTAGTTTCACAAAAAGAGGGTTTTCTTGAATaGGATCATCTAAAAGGATTC +
Preference number: 5 (lower is better)
Translates to: GRLTMCLRCAACLLVSQKEGFLE*DHLKGF
Trigger: GAATCCTTTTAGATGATCCAATTCAAGAAAACCCTC...TTTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGACACATTGTAAGCCTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAACCACTTCTGTTCTaGAATTTGGCGGACTGTCAG +
Preference number: 5 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRQPLLF*NLADCQ
Trigger: CTGACAGTCCGCCAAATTCAAGAACAGAAGTGGTTG...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp GAGAAGTGCAGAAATGAAACAAATGAAATGTCTTCTGACAAGCTCAACCAAACTTCATCCTCAGCTACTTaGGAATCAGCTTCCCAAACA +
Preference number: 5 (lower is better)
Translates to: EKCRNETNEMSSDKLNQTSSSAT*ESASQT
Trigger: TGTTTGGGAAGCTGATTCCAAAGTAGCTGAGGATGA...AGTTTGGTTGAGCTTGTCAGAAGACATTTCATTTGTTTCATTTCTGCACTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp GACAGCGCTATATTCAAACACAAGATGTTAACTACTATTCCATATTGCTTTCCCAAGAGGTCAATCTGCTaGTTAGGAATACTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: DSAIFKHKMLTTIPYCFPKRSIC*LGILPV
Trigger: CACTGGCAGTATTCCTAACAAGCAGATTGACCTCTT...GGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATATAGCGCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp GACAGCGCTATATTCAAACACAAGATGTTAACTACTATTCCATATTGCTTTCCCAAGCACCTGCGTATTTaGAAGTCAGGGTTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: DSAIFKHKMLTTIPYCFPKHLRI*KSGLCK
Trigger: TTTGCACAACCCTGACTTCAAAATACGCAGGTGCTT...GGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATATAGCGCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTGGTGCAAAAATTTCCTaGCTGATAGCAGATTTGGCA +
Preference number: 5 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIGAKIS*LIADLA
Trigger: TGCCAAATCTGCTATCAGCAAGGAAATTTTTGCACC...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCGGTGCAAAAATTTCCTaGCTGATAGCAGATTTGGCA +
Preference number: 5 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGGAKIS*LIADLA
Trigger: TGCCAAATCTGCTATCAGCAAGGAAATTTTTGCACC...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAGTGTGGGTTTCTTGTTaGTCACTGACAGGCAGATAT +
Preference number: 5 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKVWVSC*SLTGRY
Trigger: ATATCTGCCTGTCAGTGACAAACAAGAAACCCACAC...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTGCAGTTTCTCAACATTaGTGCTTCATGGCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: FHLGKITSDVTTLKCLPAAVSQH*CFMASL
Trigger: CAAGCTTGCCATGAAGCACAAATGTTGAGAAACTGC...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
CDS-3UTR CAA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAGCAGTTTCTCAACATTaGTGCTTCATGGCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKAVSQH*CFMASL
Trigger: CAAGCTTGCCATGAAGCACAAATGTTGAGAAACTGC...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATCTGAGATGTGCAGCTaGTCTCCTAGTTTCACAAAA +
Preference number: 5 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISSEMCS*SPSFTK
Trigger: TTTTGTGAAACTAGGAGACAAGCTGCACATCTCAGA...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp TTCTTGAATTTGGCGGACTGTCAGGGGGTTTTAGATTTATCCTTTCAATTATTTGCTTCCCAAACATTGTaGTTAGAGAGTTGGCAACCA +
Preference number: 5 (lower is better)
Translates to: FLNLADCQGVLDLSFQLFASQTL*LESWQP
Trigger: TGGTTGCCAACTCTCTAACAACAATGTTTGGGAAGC...AAATAATTGAAAGGATAAATCTAAAACCCCCTGACAGTCCGCCAAATTCAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCCAGGGAAGAAGAATCTaGGGTTTCACAGTATGCTTA +
Preference number: 5 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGQGRRI*GFTVCL
Trigger: TAAGCATACTGTGAAACCCAAGATTCTTCTTCCCTG...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp TTTAATGTGCACCATCTGATATTTTTACCCCCAGTAGACAAACTTTCTCTCTCCATAGATGCACAACCTTaGCTAGCCACAAAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: FNVHHLIFLPPVDKLSLSIDAQP*LATKVV
Trigger: TACTACTTTTGTGGCTAGCAAAGGTTGTGCATCTAT...GGAGAGAGAAAGTTTGTCTACTGGGGGTAAAAATATCAGATGGTGCACATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATTGCTGATAGCAGATTaGGCACTCATTGTAGAACAA +
Preference number: 5 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISLLIAD*ALIVEQ
Trigger: TTGTTCTACAATGAGTGCCAAATCTGCTATCAGCAA...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCTTGCTGATAGCAGATTaGGCACTCATTGTAGAACAA +
Preference number: 5 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGLLIAD*ALIVEQ
Trigger: TTGTTCTACAATGAGTGCCAAATCTGCTATCAGCAA...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp TTCTTGAATTTGGCGGACTGTCAGGGGGTTTTAGATTTATCCTTTCAATTATTTGGTGCAAAAATTTCCTaGCTGATAGCAGATTTGGCA +
Preference number: 5 (lower is better)
Translates to: FLNLADCQGVLDLSFQLFGAKIS*LIADLA
Trigger: TGCCAAATCTGCTATCAGCAAGGAAATTTTTGCACC...AAATAATTGAAAGGATAAATCTAAAACCCCCTGACAGTCCGCCAAATTCAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AAAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGTTGCTGATAGCAGATTaGGCACTCATTGTAGAACAA +
Preference number: 5 (lower is better)
Translates to: KENIFKTYIYTHTHSGRRLLIAD*ALIVEQ
Trigger: TTGTTCTACAATGAGTGCCAAATCTGCTATCAGCAA...CCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AAGAAAACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCTCCCATAATTTTGGATaGGCAGTTAATAAACTCTGG +
Preference number: 5 (lower is better)
Translates to: KKTYSKHTYTHIHTVGGGSHNFG*AVNKLW
Trigger: CCAGAGTTTATTAACTGCCAATCCAAAATTATGGGA...GCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp AATACATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATCCCATAATTTTGGATaGGCAGTTAATAAACTCTGG +
Preference number: 5 (lower is better)
Translates to: NTCCQFRLSAVYHLVQISSHNFG*AVNKLW
Trigger: CCAGAGTTTATTAACTGCCAATCCAAAATTATGGGA...TGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp GACAGCGCTATATTCAAACACAAGATGTTAACTACTATTCCATATTGCTTTCCCTCCCATAATTTTGGATaGGCAGTTAATAAACTCTGG +
Preference number: 5 (lower is better)
Translates to: DSAIFKHKMLTTIPYCFPSHNFG*AVNKLW
Trigger: CCAGAGTTTATTAACTGCCAATCCAAAATTATGGGA...GGGAAAGCAATATGGAATAGTAGTTAACATCTTGTGTTTGAATATAGCGCTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS-3UTR CAA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTTCCCATAATTTTGGATaGGCAGTTAATAAACTCTGG +
Preference number: 5 (lower is better)
Translates to: HVASLDSAQFIIWSKFHISHNFG*AVNKLW
Trigger: CCAGAGTTTATTAACTGCCAATCCAAAATTATGGGA...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000550887.5
CDS-3UTR CAA 90 bp CATGTTGCCAGTTTAGACTCAGCGCAGTTTATCATTTGGTCCAAATTTCATATTGAGGGTTTTCTTGAATaGGATCATCTAAAAGGATTC +
Preference number: 5 (lower is better)
Translates to: HVASLDSAQFIIWSKFHIEGFLE*DHLKGF
Trigger: GAATCCTTTTAGATGATCCAATTCAAGAAAACCCTC...AATATGAAATTTGGACCAAATGATAAACTGCGCTGAGTCTAAACTGGCAACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp TTCTTGAATTTGGCGGACTGTCAGGGGGTTTTAGATTTATCCTTTCAATTATTTATTGTTGTTAGAGAGTaGGCAACCACTTCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: FLNLADCQGVLDLSFQLFIVVRE*ATTSVL
Trigger: AAGAACAGAAGTGGTTGCCAACTCTCTAACAACAAT...AAATAATTGAAAGGATAAATCTAAAACCCCCTGACAGTCCGCCAAATTCAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp AACATATTCAAAACATACATATACACACATACACACAGTGGGAGGAGGCAAAAAATAGATGCACAACCTTaGCTAGCCACAAAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: NIFKTYIYTHTHSGRRQKIDAQP*LATKVV
Trigger: TACTACTTTTGTGGCTAGCAAAGGTTGTGCATCTAT...TTTTTGCCTCCTCCCACTGTGTGTATGTGTGTATATGTATGTTTTGAATATGTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323944.9
ENST00000396700.5
CDS-3UTR CAA 90 bp TTTCATCTAGGAAAAATAACATCTGATGTCACCACATTAAAATGCCTTCCTGCTTCCCATAATTTTGGATaGGCAGTTAATAAACTCTGG +
Preference number: 5 (lower is better)
Translates to: FHLGKITSDVTTLKCLPASHNFG*AVNKLW
Trigger: CCAGAGTTTATTAACTGCCAATCCAAAATTATGGGA...AGCAGGAAGGCATTTTAATGTGGTGACATCAGATGTTATTTTTCCTAGATGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
CDS CCA 72 bp CCGCCTCGGACGGAGCGCCAGGCGCCCCAACAGCCGTaGCGGCTGCAACCGCATCTCCCGGGCTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: PPRTERQAPQQP*RLQPHLPGLAS
Trigger: GGAGGCCAAGCCCGGGAGATGCGGTTGCAGCCGCCACGGCTGTTGGGGCGCCTGGCGCTCCGTCCGAGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS TCA 72 bp GCGCCTGCGAAGCAAACCTGCCCGCGCGGCCGCCTCTaGGCATGCTCAGTGCCGCCGTGGGCGAGCCCGAGC +
Preference number: 6 (lower is better)
Translates to: APAKQTCPRGRL*ACSVPPWASPS
Trigger: GCTCGGGCTCGCCCACGGCGGCACTGAGCATGCTCAGAGGCGGCCGCGCGGGCAGGTTTGCTTCGCAGGCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323944.9
CDS GCA 72 bp GCAGTGAATCGTGCAGCCTGGCTCGCGCCCCTGCCGTaGCAGTGCGCGGCACGCGTCCCAGAGCACGAGGCT +
Preference number: 6 (lower is better)
Translates to: AVNRAAWLAPLP*QCAARVPEHEA
Trigger: AGCCTCGTGCTCTGGGACGCGTGCCGCGCACTGGCACGGCAGGGGCGCGAGCCAGGCTGCACGATTCACTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323944.9
CDS GCA 72 bp AACAGGAAACGTGCAGCCTGGCTCGCGCCCCTGCCGTaGCAGTGCGCGGCACGCGTCCCAGAGCACGAGGCT +
Preference number: 6 (lower is better)
Translates to: NRKRAAWLAPLP*QCAARVPEHEA
Trigger: AGCCTCGTGCTCTGGGACGCGTGCCGCGCACTGGCACGGCAGGGGCGCGAGCCAGGCTGCACGTTTCCTGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396700.5
CDS GCA 72 bp CAGGGTTGGAGAGAACCAGGGACACGAGTCCCTCTCTaGGCGCACAAAGCAGCTGCGCCGGGGCGCGCGGCC +
Preference number: 6 (lower is better)
Translates to: QGWREPGTRVPL*AHKAAAPGRAA
Trigger: GGCCGCGCGCCCCGGCGCAGCTGCTTTGTGCGCGCAGAGAGGGACTCGTGTCCCTGGTTCTCTCCAACCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS CAA 90 bp CGATGCCGGCGTGCACGGCAAGCGCGAATTCGGAACCTGGCGCCCTaGACCAAGCCTGAGATCGGAAAGGGGGCATCGCCCAGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: RCRRARQARIRNLAP*TKPEIGKGASPRAS
Trigger: GCTGGCCCTGGGCGATGCCCCCTTTCCGATCTCAGGCTTGGTCAAGGGCGCCAGGTTCCGAATTCGCGCTTGCCGTGCACGCCGGCATCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS GCA 72 bp CCAGCCACGTTGCCCGGCGGTGTTGGTGAGGCTCGATaGCGGCGTGCACGGCAAGCGCGAATTCGGAACCTG +
Preference number: 6 (lower is better)
Translates to: PATLPGGVGEAR*RRARQARIRNL
Trigger: CAGGTTCCGAATTCGCGCTTGCCGTGCACGCCGGCATCGAGCCTCACCAACACCGCCGGGCAACGTGGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS TCA 72 bp AGCGCGAATTCGGAACCTGGCGCCCTTGACCAAGCCTaGGATCGGAAAGGGGGCATCGCCCAGGGCCAGCGC +
Preference number: 6 (lower is better)
Translates to: SANSEPGALDQA*DRKGGIAQGQR
Trigger: GCGCTGGCCCTGGGCGATGCCCCCTTTCCGATCTCAGGCTTGGTCAAGGGCGCCAGGTTCCGAATTCGCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS CAA 72 bp GCAGTGAATCTACTCCAGCCACGTTGCCCGGCGGTGTaGGTGAGGCTCGATGCCGGCGTGCACGGCAAGCGC +
Preference number: 6 (lower is better)
Translates to: AVNLLQPRCPAV*VRLDAGVHGKR
Trigger: GCGCTTGCCGTGCACGCCGGCATCGAGCCTCACCAACACCGCCGGGCAACGTGGCTGGAGTAGATTCACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS CAA 72 bp CGTGCACGGCAAGCGCGAATTCGGAACCTGGCGCCCTaGACCAAGCCTGAGATCGGAAAGGGGGCATCGCCC +
Preference number: 6 (lower is better)
Translates to: RARQARIRNLAP*TKPEIGKGASP
Trigger: GGGCGATGCCCCCTTTCCGATCTCAGGCTTGGTCAAGGGCGCCAGGTTCCGAATTCGCGCTTGCCGTGCACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS CAA 90 bp GGACAGCACGCAGTGAATCTACTCCAGCCACGTTGCCCGGCGGTGTaGGTGAGGCTCGATGCCGGCGTGCACGGCAAGCGCGAATTCGGA +
Preference number: 6 (lower is better)
Translates to: GQHAVNLLQPRCPAV*VRLDAGVHGKREFG
Trigger: TCCGAATTCGCGCTTGCCGTGCACGCCGGCATCGAGCCTCACCAACACCGCCGGGCAACGTGGCTGGAGTAGATTCACTGCGTGCTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS TCA 72 bp GTGCACGGCAAGCGCGAATTCGGAACCTGGCGCCCTTaGCCAAGCCTGAGATCGGAAAGGGGGCATCGCCCA +
Preference number: 6 (lower is better)
Translates to: VHGKREFGTWRP*PSLRSERGHRP
Trigger: TGGGCGATGCCCCCTTTCCGATCTCAGGCTTGGTCAAGGGCGCCAGGTTCCGAATTCGCGCTTGCCGTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS CCA 72 bp CTTGCCCAATACTGCCCGCACAACGGGTCCCAGGGTTaGAGAGAACCAGGGACACGAGTCCCTCTCTGCGCG +
Preference number: 6 (lower is better)
Translates to: LAQYCPHNGSQG*REPGTRVPLCA
Trigger: CGCGCAGAGAGGGACTCGTGTCCCTGGTTCTCTCCAACCCTGGGACCCGTTGTGCGGGCAGTATTGGGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS CAA 72 bp GTGAGGACAGCACGCAGTGAATCTACTCCAGCCACGTaGCCCGGCGGTGTTGGTGAGGCTCGATGCCGGCGT +
Preference number: 6 (lower is better)
Translates to: VRTARSESTPAT*PGGVGEARCRR
Trigger: ACGCCGGCATCGAGCCTCACCAACACCGCCGGGCAACGTGGCTGGAGTAGATTCACTGCGTGCTGTCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS CAA 90 bp CGTTCTGCGGCTTGCCCAATACTGCCCGCACAACGGGTCCCAGGGTaGGAGAGAACCAGGGACACGAGTCCCTCTCTGCGCGCACAAAGC +
Preference number: 6 (lower is better)
Translates to: RSAACPILPAQRVPG*ERTRDTSPSLRAQS
Trigger: GCTTTGTGCGCGCAGAGAGGGACTCGTGTCCCTGGTTCTCTCCAACCCTGGGACCCGTTGTGCGGGCAGTATTGGGCAAGCCGCAGAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS GCA 72 bp GGAGGAAATCGCTCCGTTCTGCGGCTTGCCCAATACTaGCCGCACAACGGGTCCCAGGGTTGGAGAGAACCA +
Preference number: 6 (lower is better)
Translates to: GGNRSVLRLAQY*PHNGSQGWREP
Trigger: TGGTTCTCTCCAACCCTGGGACCCGTTGTGCGGGCAGTATTGGGCAAGCCGCAGAACGGAGCGATTTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS GCA 72 bp CAACTTTCTCGGAGGAAATCGCTCCGTTCTGCGGCTTaGCCAATACTGCCCGCACAACGGGTCCCAGGGTTG +
Preference number: 6 (lower is better)
Translates to: QLSRRKSLRSAA*PILPAQRVPGL
Trigger: CAACCCTGGGACCCGTTGTGCGGGCAGTATTGGGCAAGCCGCAGAACGGAGCGATTTCCTCCGAGAAAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS GCA 72 bp CCATCCTCAACTTTCTCGGAGGAAATCGCTCCGTTCTaGGGCTTGCCCAATACTGCCCGCACAACGGGTCCC +
Preference number: 6 (lower is better)
Translates to: PSSTFSEEIAPF*GLPNTARTTGP
Trigger: GGGACCCGTTGTGCGGGCAGTATTGGGCAAGCCGCAGAACGGAGCGATTTCCTCCGAGAAAGTTGAGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS CAA 90 bp GCTCCATCCTCAACTTTCTCGGAGGAAATCGCTCCGTTCTGCGGCTaGCCCAATACTGCCCGCACAACGGGTCCCAGGGTTGGAGAGAAC +
Preference number: 6 (lower is better)
Translates to: APSSTFSEEIAPFCG*PNTARTTGPRVGEN
Trigger: GTTCTCTCCAACCCTGGGACCCGTTGTGCGGGCAGTATTGGGCAAGCCGCAGAACGGAGCGATTTCCTCCGAGAAAGTTGAGGATGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS CAA 72 bp TCAACTTTCTCGGAGGAAATCGCTCCGTTCTGCGGCTaGCCCAATACTGCCCGCACAACGGGTCCCAGGGTT +
Preference number: 6 (lower is better)
Translates to: STFSEEIAPFCG*PNTARTTGPRV
Trigger: AACCCTGGGACCCGTTGTGCGGGCAGTATTGGGCAAGCCGCAGAACGGAGCGATTTCCTCCGAGAAAGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS GCA 72 bp CTGCGCTGGTCACGCTGTCAGCAGCTGAATGGAGGATaGTGTTTCCTGAAAGGAGGAGAGCAGGAGCATCAG +
Preference number: 6 (lower is better)
Translates to: LRWSRCQQLNGG*CFLKGGEQEHQ
Trigger: CTGATGCTCCTGCTCTCCTCCTTTCAGGAAACAGCATCCTCCATTCAGCTGCTGACAGCGTGACCAGCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548369.1
CDS TCA 72 bp TTTCCTAGAAGATGCCAGAGTTCGCGAAGATCGGAGTaGTTCGCGGATTTCTGCGCTCAAGCTAGAGGCGCA +
Preference number: 6 (lower is better)
Translates to: FPRRCQSSRRSE*FADFCAQARGA
Trigger: TGCGCCTCTAGCTTGAGCGCAGAAATCCGCGAATCACTCCGATCTTCGCGAACTCTGGCATCTTCTAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419632.6
CDS CCA 72 bp TTCATGGCAAGCTTGTGCGCAGTTTCTGCAAACTGCTaGGCGCTGTTCTTCAGGTCTTCTGTCTTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: FMASLCAVSANC*ALFFRSSVFSS
Trigger: AGAGGAGAAGACAGAAGACCTGAAGAACAGCGCCCAGCAGTTTGCAGAAACTGCGCACAAGCTTGCCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548369.1
ENST00000550887.5
CDS TCA 72 bp TCTAGGAAACAAGCCGACATTTCTTTTGATTGGGTTTaGCTGACGCACTTGCAGCAAGAACACCCACTGACT +
Preference number: 6 (lower is better)
Translates to: SRKQADISFDWV*LTHLQQEHPLT
Trigger: AGTCAGTGGGTGTTCTTGCTGCAAGTGCGTCAGTCAAACCCAATCAAAAGAAATGTCGGCTTGTTTCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548369.1
CDS GCA 72 bp CGCAGTGAATCTTTAACGCAGCCTTTTAGTTGGGACTaGACTTCATGGAAAACTCCACACACAAAGCACCTT +
Preference number: 6 (lower is better)
Translates to: RSESLTQPFSWD*TSWKTPHTKHL
Trigger: AAGGTGCTTTGTGTGTGGAGTTTTCCATGAAGTGCAGTCCCAACTAAAAGGCTGCGTTAAAGATTCACTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396700.5
CDS GCA 72 bp GTGAGGACAGCACGCAGTGAATTCATTCAATATCACTaGATTGTCCTAACGCTGAGGATACTGAGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: VRTARSEFIQYH*IVLTLRILRRR
Trigger: TCTTCTCCTCAGTATCCTCAGCGTTAGGACAATGCAGTGATATTGAATGAATTCACTGCGTGCTGTCCTCAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS CAA 72 bp CAAGAAAGGAATCTTTTTCTTTGTCCTCCTCTTGACTaGGACAGCTCCCAGCATCCTTTCATCAAGAGGTGC +
Preference number: 6 (lower is better)
Translates to: QERNLFLCPPLD*DSSQHPFIKRC
Trigger: GCACCTCTTGATGAAAGGATGCTGGGAGCTGTCCAAGTCAAGAGGAGGACAAAGAAAAAGATTCCTTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548182.1
ENST00000550887.5
CDS CAA 90 bp TGGACAGCTCCCAGCATCCTTTCATCAAGAGGTGCAAAAATTTCCTaGCTGATAGCAGATTTGGCACTCATTGTAGAACAAGTGAGGACA +
Preference number: 6 (lower is better)
Translates to: WTAPSILSSRGAKIS*LIADLALIVEQVRT
Trigger: TGTCCTCACTTGTTCTACAATGAGTGCCAAATCTGCTATCAGCAAGGAAATTTTTGCACCTCTTGATGAAAGGATGCTGGGAGCTGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548182.1
ENST00000550887.5
CDS TCA 72 bp GGCACTCATTGTAGAACAAGTGAGGACAGCACGCAGTaGATTCATTCAATATCACTGCATTGTCCTAACGCT +
Preference number: 6 (lower is better)
Translates to: GTHCRTSEDSTQ*IHSISLHCPNA
Trigger: AGCGTTAGGACAATGCAGTGATATTGAATGAATTCACTGCGTGCTGTCCTCACTTGTTCTACAATGAGTGCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548182.1
CDS CAA 90 bp TCCAGTTGCCAAGAAAGGAATCTTTTTCTTTGTCCTCCTCTTGACTaGGACAGCTCCCAGCATCCTTTCATCAAGAGGTGCAAAAATTTC +
Preference number: 6 (lower is better)
Translates to: SSCQERNLFLCPPLD*DSSQHPFIKRCKNF
Trigger: GAAATTTTTGCACCTCTTGATGAAAGGATGCTGGGAGCTGTCCAAGTCAAGAGGAGGACAAAGAAAAAGATTCCTTTCTTGGCAACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548182.1
ENST00000550887.5
CDS CAA 72 bp CCCAGCATCCTTTCATCAAGAGGTGCAAAAATTTCCTaGCTGATAGCAGATTTGGCACTCATTGTAGAACAA +
Preference number: 6 (lower is better)
Translates to: PSILSSRGAKIS*LIADLALIVEQ
Trigger: TTGTTCTACAATGAGTGCCAAATCTGCTATCAGCAAGGAAATTTTTGCACCTCTTGATGAAAGGATGCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323944.9
ENST00000396700.5
ENST00000419632.6
ENST00000546511.5
ENST00000548182.1
ENST00000550887.5