RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STXBP5L (Homo sapiens)

Ensembl gene IDs: ENSG00000145087

Ensembl transcript IDs: ENST00000273666.10, ENST00000461772.5, ENST00000471262.1, ENST00000471454.6, ENST00000472879.5, ENST00000492541.5, ENST00000495504.5, ENST00000497029.5

Found 534 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTTCCAAGCCAGATTCTGTTACCGTAAGGCTGTTCACAGGAGTCTaGGAGATTCAGAGAGGCTTTCTTAACAAGAGGATTCAAGGACTC +
Preference number: 1 (lower is better)
Translates to: VSKPDSVTVRLFTGV*EIQRGFLNKRIQGL
Trigger: GAGTCCTTGAATCCTCTTGTTAAGAAAGCCTCTCTGAATCTCCCAGACTCCTGTGAACAGCCTTACGGTAACAGAATCTGGCTTGGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CCA 90 bp GGCCTTATCTTCCAAGGAAATCATAGGGAGACAAGGTCAACTTGTTaGGACTGTGGTTTGCAAGCCTTATCTTCTGATGTCGCTTTAGCA +
Preference number: 1 (lower is better)
Translates to: GLIFQGNHRETRSTC*DCGLQALSSDVALA
Trigger: TGCTAAAGCGACATCAGAAGATAAGGCTTGCAAACCACAGTCCCAACAAGTTGACCTTGTCTCCCTATGATTTCCTTGGAAGATAAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CCA 90 bp AAGGTTTCCTTAGTTGGCCATAAAGCAGTGATAATCAACTTTGGCTaGACATTAGAACCGCCTTGGAGGCTTTCGCAAATATTGGTGTCT +
Preference number: 1 (lower is better)
Translates to: KVSLVGHKAVIINFG*TLEPPWRLSQILVS
Trigger: AGACACCAATATTTGCGAAAGCCTCCAAGGCGGTTCTAATGTCCAGCCAAAGTTGATTATCACTGCTTTATGGCCAACTAAGGAAACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CCA 90 bp GAATTGCCAGTGTTTATTCCTTTTGAAAGCATACATCTTACCATGTaGAATTGTGGTCTGGAAAGGGCGACTTGGGCTTTTCAGGTTCCA +
Preference number: 1 (lower is better)
Translates to: ELPVFIPFESIHLTM*NCGLERATWAFQVP
Trigger: TGGAACCTGAAAAGCCCAAGTCGCCCTTTCCAGACCACAATTCCACATGGTAAGATGTATGCTTTCAAAAGGAATAAACACTGGCAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR TCA 90 bp ACTCCTCTAGATAAATGTGTAAATCAAAGCATCCATCTGTGCATCTaGTTCCTTAAAGCCTCTTTCACTTCACTGTGGCTCCCATGTCCT +
Preference number: 1 (lower is better)
Translates to: TPLDKCVNQSIHLCI*FLKASFTSLWLPCP
Trigger: AGGACATGGGAGCCACAGTGAAGTGAAAGAGGCTTTAAGGAATCAGATGCACAGATGGATGCTTTGATTTACACATTTATCTAGAGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR TCA 90 bp TTTCTCATAGCAGCAGGTTGTAATCACACAGATATACTCCCAGTTTaGCCCAATGATCCTAAGCCAAGGAGAGGATTTTTAGCTTACTTT +
Preference number: 1 (lower is better)
Translates to: FLIAAGCNHTDILPV*PNDPKPRRGFLAYF
Trigger: AAAGTAAGCTAAAAATCCTCTCCTTGGCTTAGGATCATTGGGTCAAACTGGGAGTATATCTGTGTGATTACAACCTGCTGCTATGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR TCA 90 bp GATGGAGCACTGCCTGGTCAGAAATTCTCAAATGCTTTTGTTCTGTaGGACATACAGAATAAATACCATTACTATATCTTACATCTTGCC +
Preference number: 1 (lower is better)
Translates to: DGALPGQKFSNAFVL*DIQNKYHYYILHLA
Trigger: GGCAAGATGTAAGATATAGTAATGGTATTTATTCTGTATGTCTCACAGAACAAAAGCATTTGAGAATTTCTGACCAGGCAGTGCTCCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR TCA 90 bp GGTAGTAGGTGTCTCTATTTGGTTTTGACTCTGGTGCTTTTCTGGTaGGTTATAGATACCTTGTATCATGTTAAGGATATTCTTTATTCC +
Preference number: 1 (lower is better)
Translates to: GSRCLYLVLTLVLFW*VIDTLYHVKDILYS
Trigger: GGAATAAAGAATATCCTTAACATGATACAAGGTATCTATAACTCACCAGAAAAGCACCAGAGTCAAAACCAAATAGAGACACCTACTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR GCA 90 bp TTCAGAGAGGCTTTCTTAACAAGAGGATTCAAGGACTCTGAGAAATaGTATCCTAGTGTACATTATCTAACTCTTTCACTCATCTTTGTT +
Preference number: 1 (lower is better)
Translates to: FREAFLTRGFKDSEK*YPSVHYLTLSLIFV
Trigger: AACAAAGATGAGTGAAAGAGTTAGATAATGTACACTAGGATAGCATTTCTCAGAGTCCTTGAATCCTCTTGTTAAGAAAGCCTCTCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACTGGCTTCTAGCAGTTaGGTAGTGATGCTGGGAATA +
Preference number: 2 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYELASSS*VVMLGI
Trigger: TATTCCCAGCATCACTACTCAACTGCTAGAAGCCAG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CAA 90 bp CTGTGGCTCCCATGTCCTTCCTCACCACGATCTTCTTGCACCAAATaGGTACTTCCTCCTCCTTTTCTAAGACAGACCTTACCTATTCTA +
Preference number: 2 (lower is better)
Translates to: LWLPCPSSPRSSCTK*VLPPPFLRQTLPIL
Trigger: TAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGGAGGAAGTACCAATTTGGTGCAAGAAGATCGTGGTGAGGAAGGACATGGGAGCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CAA 90 bp TTTCACTTCACTGTGGCTCCCATGTCCTTCCTCACCACGATCTTCTaGCACCAAATTGGTACTTCCTCCTCCTTTTCTAAGACAGACCTT +
Preference number: 2 (lower is better)
Translates to: FHFTVAPMSFLTTIF*HQIGTSSSFSKTDL
Trigger: AAGGTCTGTCTTAGAAAAGGAGGAGGAAGTACCAATTTGGTGCAAGAAGATCGTGGTGAGGAAGGACATGGGAGCCACAGTGAAGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGTGTGTGTGTGTGCGTaGGTGCTAAGGTCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVVCVCA*VLRSVQ
Trigger: TTGCACTGACCTTAGCACGCACGCACACACACACAC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR GCA 90 bp TCTTACCATGTGGAATTGTGGTCTGGAAAGGGCGACTTGGGCTTTTCAGGTTCCAACCTATTAGCAGTTTaGCTTCATCTCTTGGGCTAT +
Preference number: 2 (lower is better)
Translates to: SYHVELWSGKGDLGFSGSNLLAV*LHLLGY
Trigger: ATAGCCCAAGAGATGAAGGCAAACTGCTAATAGGTT...GGAACCTGAAAAGCCCAAGTCGCCCTTTCCAGACCACAATTCCACATGGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATGGGGCCCTAAAGTCTaGGGCTCAGTGAAGTGTAAG +
Preference number: 2 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLWGPKV*GSVKCK
Trigger: CTTACACTTCACTGAGCCCCAGACTTTAGGGCCCCA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CAA 90 bp ATGTCAGGCTGCAAGAGCACCTTTCGATTGCAGACCCTACTGGGTTaGAACAGTAATATACTGTGTAACTGGCAGACAAGGATACAAATG +
Preference number: 2 (lower is better)
Translates to: MSGCKSTFRLQTLLG*NSNILCNWQTRIQM
Trigger: CATTTGTATCCTTGTCTGCCAGTTACACAGTATATTACTGTTCAAACCCAGTAGGGTCTGCAATCGAAAGGTGCTCTTGCAGCCTGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CAA 90 bp GGGTTGGTAGGAAGAAGGGAAGTATGGAAAGTTTGGGGTACAATGTaGGGATCTGTAGGTGGTATAAAAGGGATGTTTAGAACCAGAAGC +
Preference number: 2 (lower is better)
Translates to: GLVGRREVWKVWGTM*GSVGGIKGMFRTRS
Trigger: GCTTCTGGTTCTAAACATCCCTTTTATACCACCTACAGATCCCAACATTGTACCCCAAACTTTCCATACTTCCCTTCTTCCTACCAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTGGCTTCTAGCAGTTaGGTAGTGATGCTGGGAATA +
Preference number: 2 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLASSS*VVMLGI
Trigger: TATTCCCAGCATCACTACTCAACTGCTAGAAGCCAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTGAAGAAAATGCTTTaGGGTGACCCAACCCTGCAT +
Preference number: 2 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLKKML*GDPTLH
Trigger: ATGCAGGGTTGGGTCACCTCAAAGCATTTTCTTCAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGAGTACAAGCCAGGCTaGAGAAAATGCTTTGAGGTG +
Preference number: 2 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVEYKPG*RKCFEV
Trigger: CACCTCAAAGCATTTTCTTCAGCCTGGCTTGTACTC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp TTGGGACAGTACATAACTACAGCTTACAAAACAGGGATGTGGGTTGGTAGGAAGAGTCAAACTACCATCTaGATGGCTGCACATGAACTG +
Preference number: 2 (lower is better)
Translates to: LGQYITTAYKTGMWVGRKSQTTI*MAAHEL
Trigger: CAGTTCATGTGCAGCCATTCAGATGGTAGTTTGACT...CTTCCTACCAACCCACATCCCTGTTTTGTAAGCTGTAGTTATGTACTGTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTAGGAGGTTCTTACTaGCATCTAGTAGACAGAGGC +
Preference number: 2 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLGGSY*HLVDRG
Trigger: GCCTCTGTCTACTAGATGCCAGTAAGAACCTCCTAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGAAAATGCTTTGAGGTaGCCCAACCCTGCATGGTTT +
Preference number: 2 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLENALR*PNPAWF
Trigger: AAACCATGCAGGGTTGGGTCACCTCAAAGCATTTTC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACTCCAGCCTTTGGGTTaGACAGTGTCTCTGATACAT +
Preference number: 2 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLLQPLG*TVSLIH
Trigger: ATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACCATGTTCCCTGGAATaGTGCATACTAGAGGTACTG +
Preference number: 2 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLPCSLE*CILEVL
Trigger: CAGTACCTCTAGTATGCACCATTCCAGGGAACATGG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CCA 90 bp CTTGTGATCTATGGGTCACCCATTACAGAAAACATACCACTACTTTCCAAATGTTGTGGAATTGTGGTCTaGAAAGGGCGACTTGGGCTT +
Preference number: 2 (lower is better)
Translates to: LVIYGSPITENIPLLSKCCGIVV*KGRLGL
Trigger: AAGCCCAAGTCGCCCTTTCCAGACCACAATTCCACA...ACATTTGGAAAGTAGTGGTATGTTTTCTGTAATGGGTGACCCATAGATCACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR CAA 90 bp AGTGGCTGTGAACTGGGAGAAATTTTGGCAATGACTGGAGACATTTaGATTGTCATTACTAGGAGGTTCTTACTGGCATCTAGTAGACAG +
Preference number: 2 (lower is better)
Translates to: SGCELGEILAMTGDI*IVITRRFLLASSRQ
Trigger: CTGTCTACTAGATGCCAGTAAGAACCTCCTAGTAATGACAATCAAAATGTCTCCAGTCATTGCCAAAATTTCTCCCAGTTCACAGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGATATACTCCCAGTTTaGCCCAATGATCCTAAGCCA +
Preference number: 2 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLDILPV*PNDPKP
Trigger: TGGCTTAGGATCATTGGGTCAAACTGGGAGTATATC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGAGGTGAAGAAGCTGTaGAAGCCACCACGTTTCTCC +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLEVKKL*KPPRFS
Trigger: GGAGAAACGTGGTGGCTTTCACAGCTTCTTCACCTC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp CTGCCCCAGATATATCAACCATCCATTATCCAATTTTTGGTTGGGACAGTACATATGAAGTGTATCATCTaGACTTGCACTGACCAAGGC +
Preference number: 2 (lower is better)
Translates to: LPQIYQPSIIQFLVGTVHMKCII*TCTDQG
Trigger: GCCTTGGTCAGTGCAAGTTCAGATGATACACTTCAT...ATGTACTGTCCCAACCAAAAATTGGATAATGGATGGTTGATATATCTGGGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTAACTTGTTGGGACTGTaGTTTGCAAGCCTTATCTTC +
Preference number: 2 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVNLLGL*FASLIF
Trigger: GAAGATAAGGCTTGCAAACCACAGTCCCAACAAGTT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATGGGGCCCTAAAGTCTaGGGCTCAGTGAAGTGTAAG +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLWGPKV*GSVKCK
Trigger: CTTACACTTCACTGAGCCCCAGACTTTAGGGCCCCA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTAGACCCTACTGGGTTTaGACAGTAATATACTGTGTA +
Preference number: 2 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVRPYWV*TVIYCV
Trigger: TACACAGTATATTACTGTTCAAACCCAGTAGGGTCT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGACCAGTTTGGTTTGTaGATGTCAGGCTGCAAGAGC +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLDQFGL*MSGCKS
Trigger: GCTCTTGCAGCCTGACATTCACAAACCAAACTGGTC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTGGTGCTTTTCTGGTaGGTTATAGATACCTTGTAT +
Preference number: 2 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLVLFW*VIDTLY
Trigger: ATACAAGGTATCTATAACTCACCAGAAAAGCACCAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTAGCTTCTCACAGATaGATAAATGAAAAGGCCCAT +
Preference number: 2 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLASHR*INEKAH
Trigger: ATGGGCCTTTTCATTTATTCATCTGTGAGAAGCTAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp TTGGGACAGTACATAACTACAGCTTACAAAACAGGGATGTGGGTTGGTAGGAAGCTAAGGTTCCACAAATaGAGTGTATCATCTGAACTT +
Preference number: 2 (lower is better)
Translates to: LGQYITTAYKTGMWVGRKLRFHK*SVSSEL
Trigger: AAGTTCAGATGATACACTTCATTTGTGGAACCTTAG...CTTCCTACCAACCCACATCCCTGTTTTGTAAGCTGTAGTTATGTACTGTCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR-3UTR TCA 90 bp CTTGTGATCTATGGGTCACCCATTACAGAAAACATACCACTACTTTCCAAATGTACAACTGGACCTGGATaGGTCTTAGTGGATAGTTCA +
Preference number: 2 (lower is better)
Translates to: LVIYGSPITENIPLLSKCTTGPG*VLVDSS
Trigger: TGAACTATCCACTAAGACTCATCCAGGTCCAGTTGT...ACATTTGGAAAGTAGTGGTATGTTTTCTGTAATGGGTGACCCATAGATCACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAAATTCAGCCGTATTTTaGGATTTTAACCAGGGCTCC +
Preference number: 2 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLNSAVF*DFNQGS
Trigger: GGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACTAAACTTGTTATGTTaGCAACCATGTTCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLLNLLC*QPCSLE
Trigger: TTCCAGGGAACATGGTTGTCAACATAACAAGTTTAG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp CAACCATCCATTATCCAATTTTTGGTTGGGACAGTACATAACTACAGCTTACAACCAAGGCACCCTCATTaGTCAAAAATTGGAGCTGTA +
Preference number: 2 (lower is better)
Translates to: QPSIIQFLVGTVHNYSLQPRHPH*SKIGAV
Trigger: TACAGCTCCAATTTTTGATCAATGAGGGTGCCTTGG...TTGTAAGCTGTAGTTATGTACTGTCCCAACCAAAAATTGGATAATGGATGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGAGGTGACCCAACCCTaGATGGTTTGTGCTAAAAAC +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLEVTQP*MVCAKN
Trigger: GTTTTTAGCACAAACCATGCAGGGTTGGGTCACCTC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATGTTCCCTGGAATGGTaGATACTAGAGGTACTGCTC +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLCSLEW*ILEVLL
Trigger: GAGCAGTACCTCTAGTATGCACCATTCCAGGGAACA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCAACATATTACAGGATaGGTCCTGGAATGTGTATAT +
Preference number: 2 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVQHITG*VLECVY
Trigger: ATATACACATTCCAGGACCCATCCTGTAATATGTTG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAACAAGGTCAACTTGTTaGGACTGTGGTTTGCAAGCC +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLTRSTC*DCGLQA
Trigger: GGCTTGCAAACCACAGTCCCAACAAGTTGACCTTGT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACCATGTTCCCTGGAATaGTGCATACTAGAGGTACTG +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLPCSLE*CILEVL
Trigger: CAGTACCTCTAGTATGCACCATTCCAGGGAACATGG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGTGGCTTATATTATTTaGCCTAGGGACAAAAGCATT +
Preference number: 2 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLVAYII*PRDKSI
Trigger: AATGCTTTTGTCCCTAGGTCAAATAATATAAGCCAC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATTCTTTTCAAGCATTTaGGAAGCACCTGTTTACTTC +
Preference number: 2 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLFFSSI*EAPVYF
Trigger: GAAGTAAACAGGTGCTTCTCAAATGCTTGAAAAGAA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTAAGGACTCTGAGAAATaGTATCCTAGTGTACATTAT +
Preference number: 2 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVKDSEK*YPSVHY
Trigger: ATAATGTACACTAGGATAGCATTTCTCAGAGTCCTT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGTAAAGATGAGACTATaGAAAGGATTACATGGATCA +
Preference number: 2 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVVKMRL*KGLHGS
Trigger: TGATCCATGTAATCCTTTGCATAGTCTCATCTTTAC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGTTTTCCGTTTCAGTTaGGTATGGCAAATATATTTG +
Preference number: 2 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVVFRFS*VWQIYL
Trigger: CAAATATATTTGCCATACCCAACTGAAACGGAAAAC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CAA 90 bp AAACGCATTAATACCATCTCTCTTACTTCAAGTCAAGGCACTGAATaGCCAGTGTTTATTCCTTTTGAAAGCATACATCTTACCATGTGG +
Preference number: 2 (lower is better)
Translates to: KRINTISLTSSQGTE*PVFIPFESIHLTMW
Trigger: CCACATGGTAAGATGTATGCTTTCAAAAGGAATAAACACTGGCAATTCAGTGCCTTGACTTGAAGTAAGAGAGATGGTATTAATGCGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGTCTCTATTTGGTTTTaGCTCTGGTGCTTTTCTGGT +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLVSIWF*LWCFSG
Trigger: ACCAGAAAAGCACCAGAGTCAAAACCAAATAGAGAC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAATCCATCTGTGCATCTaGTTCCTTAAAGCCTCTTTC +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLIHLCI*FLKASF
Trigger: GAAAGAGGCTTTAAGGAATCAGATGCACAGATGGAT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAAAGGACTCTGAGAAATaGTATCCTAGTGTACATTAT +
Preference number: 2 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLKDSEK*YPSVHY
Trigger: ATAATGTACACTAGGATAGCATTTCTCAGAGTCCTT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAACTCATCAAATGTACTaGTACTTTGGACTGAATTTC +
Preference number: 2 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLTHQMY*YFGLNF
Trigger: GAAATTCAGTCCAAAGTAGCAGTACATTTGATGAGT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGTAAAGATGAGACTATaGAAAGGATTACATGGATCA +
Preference number: 2 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLVKMRL*KGLHGS
Trigger: TGATCCATGTAATCCTTTGCATAGTCTCATCTTTAC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATCACCACGATCTTCTTaGACCAAATTGGTACTTCCT +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLSPRSS*TKLVLP
Trigger: AGGAAGTACCAATTTGGTGCAAGAAGATCGTGGTGA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAAATATACTGTGTAACTaGCAGACAAGGATACAAATG +
Preference number: 2 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLNILCN*QTRIQM
Trigger: CATTTGTATCCTTGTCTGCCAGTTACACAGTATATT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAAAATCCAAGTGGCCCTaGGAGCTTTTGATTGAGATA +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLKSKWP*ELLIEI
Trigger: TATCTCAATCAAAAGCTCCCAGGGCCACTTGGATTT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAACCCTTTCAGGGCACTaGATGTCATATAGGAAGTTA +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLTLSGH*MSYRKL
Trigger: TAACTTCCTATATGACATCCAGTGCCCTGAAAGGGT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CCA 90 bp CTTCATAACTTACTGGAATCAAATGGCAGAAATGGAAACAAGTGGGAGAATCTATCATTGATCAAAAATTaGAGCTGTAGGACAGCTGCA +
Preference number: 2 (lower is better)
Translates to: LHNLLESNGRNGNKWENLSLIKN*SCRTAA
Trigger: TGCAGCTGTCCTACAGCTCCAATTTTTGATCAATGA...TAGATTCTCCCACTTGTTTCCATTTCTGCCATTTGATTCCAGTAAGTTATGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAAGACCCTACTGGGTTTaGACAGTAATATACTGTGTA +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLRPYWV*TVIYCV
Trigger: TACACAGTATATTACTGTTCAAACCCAGTAGGGTCT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGTCTATAATGATGACTaGGACCAAGATAGCAAACAG +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLVYNDD*DQDSKQ
Trigger: CTGTTTGCTATCTTGGTCTCAGTCATCATTATAGAC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATCCAAGACTAATGGATaGTTTCAAGGTAGGGACTAT +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLSKTNG*FQGRDY
Trigger: ATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAACTTCTGGTATCTTGTaGTGTCACATGTGTAAGACA +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLTSGIL*CHMCKT
Trigger: TGTCTTACACATGTGACATCACAAGATACCAGAAGT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACTATTCTACATTTCATaGTTTCAGGGCTATGTTGTC +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLFYIS*FQGYVV
Trigger: GACAACATAGCCCTGAAAGCATGAAATGTAGAATAG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACTCTTGAATTTACTGTaGTACTTCTGGTATCTTGTG +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLLNLL*YFWYLV
Trigger: CACAAGATACCAGAAGTAGCACAGTAAATTCAAGAG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATTACTGTGCTACTTCTaGTATCTTGTGATGTCACAT +
Preference number: 2 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLLCYF*YLVMSH
Trigger: ATGTGACATCACAAGATACCAGAAGTAGCACAGTAA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CCA 72 bp ATATCTTACATCTTGCCTTCCCTGACCACTCAGAACTaGGGCTGGAGCACCAGCCAAGGCAGACAAACAAGG +
Preference number: 3 (lower is better)
Translates to: ISYILPSLTTQN*GWSTSQGRQTR
Trigger: CCTTGTTTGTCTGCCTTGGCTGGTGCTCCAGCCCCAGTTCTGAGTGGTCAGGGAAGGCAAGATGTAAGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CCA 72 bp CTTGCACTGACCAAGGCACCCTCATTGATCAAAAATTaGAGCTGTAGGACAGCTGCACCACTTTCATGTTGG +
Preference number: 3 (lower is better)
Translates to: LALTKAPSLIKN*SCRTAAPLSCW
Trigger: CCAACATGAAAGTGGTGCAGCTGTCCTACAGCTCCAATTTTTGATCAATGAGGGTGCCTTGGTCAGTGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGCTCCAGCCTTTGGGTaGCACAGTGTCTCTGATACA +
Preference number: 3 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVAPAFG*HSVSDT
Trigger: TGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp TCTTACCATGTGGAATTGTGGTCTGGAAAGGGCGACTTGGGCTTTTCAGGTTCCGTTTGCCTTCATCTCTaGGGCTATCGCTTAAATGTA +
Preference number: 3 (lower is better)
Translates to: SYHVELWSGKGDLGFSGSVCLHL*GYRLNV
Trigger: TACATTTAAGCGATAGCCCAAGAGATGAAGGCAAAC...GGAACCTGAAAAGCCCAAGTCGCCCTTTCCAGACCACAATTCCACATGGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR CCA 72 bp GTGATAATCAACTTTGGCTGGACATTAGAACCGCCTTaGAGGCTTTCGCAAATATTGGTGTCTGGTTCCCAC +
Preference number: 3 (lower is better)
Translates to: VIINFGWTLEPP*RLSQILVSGSH
Trigger: GTGGGAACCAGACACCAATATTTGCGAAAGCCTCCAAGGCGGTTCTAATGTCCAGCCAAAGTTGATTATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR TCA 72 bp GCAAGAGCACCTTTCGATTGCAGACCCTACTGGGTTTaGACAGTAATATACTGTGTAACTGGCAGACAAGGA +
Preference number: 3 (lower is better)
Translates to: ARAPFDCRPYWV*TVIYCVTGRQG
Trigger: TCCTTGTCTGCCAGTTACACAGTATATTACTGTTCAAACCCAGTAGGGTCTGCAATCGAAAGGTGCTCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CCA 72 bp CCAGATTCTGTTACCGTAAGGCTGTTCACAGGAGTCTaGGAGATTCAGAGAGGCTTTCTTAACAAGAGGATT +
Preference number: 3 (lower is better)
Translates to: PDSVTVRLFTGV*EIQRGFLNKRI
Trigger: AATCCTCTTGTTAAGAAAGCCTCTCTGAATCTCCCAGACTCCTGTGAACAGCCTTACGGTAACAGAATCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CCA 72 bp TCAGAGTTCCAGTTAGACAATGATCTTGACAATGATTaGGGCCCTAAAGTCTGGGGCTCAGTGAAGTGTAAG +
Preference number: 3 (lower is better)
Translates to: SEFQLDNDLDND*GPKVWGSVKCK
Trigger: CTTACACTTCACTGAGCCCCAGACTTTAGGGCCCCAATCATTGTCAAGATCATTGTCTAACTGGAACTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGGAGACAAGGTCAACTaGTTGGGACTGTGGTTTGCA +
Preference number: 3 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLGDKVN*LGLWFA
Trigger: TGCAAACCACAGTCCCAACAAGTTGACCTTGTCTCC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp TTGGGACAGTACATAACTACAGCTTACAAAACAGGGATGTGGGTTGGTAGGAAGGGAAGTATGGAAAGTTaGGGGTACAATGTTGGGATC +
Preference number: 3 (lower is better)
Translates to: LGQYITTAYKTGMWVGRKGSMES*GYNVGI
Trigger: GATCCCAACATTGTACCCCAAACTTTCCATACTTCC...CTTCCTACCAACCCACATCCCTGTTTTGTAAGCTGTAGTTATGTACTGTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR TCA 72 bp CTGAATCACACTAAAGAGAATGACCAGTTTGGTTTGTaGATGTCAGGCTGCAAGAGCACCTTTCGATTGCAG +
Preference number: 3 (lower is better)
Translates to: LNHTKENDQFGL*MSGCKSTFRLQ
Trigger: CTGCAATCGAAAGGTGCTCTTGCAGCCTGACATTCACAAACCAAACTGGTCATTCTCTTTAGTGTGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR TCA 72 bp CTTGGGCTATCGCTTAAATGTACAACTGGACCTGGATaGGTCTTAGTGGATAGTTCAATTGCCTTGTTCCAC +
Preference number: 3 (lower is better)
Translates to: LGLSLKCTTGPG*VLVDSSIALFH
Trigger: GTGGAACAAGGCAATTGAACTATCCACTAAGACTCATCCAGGTCCAGTTGTACATTTAAGCGATAGCCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR CCA 72 bp TTCCAAGGAAATCATAGGGAGACAAGGTCAACTTGTTaGGACTGTGGTTTGCAAGCCTTATCTTCTGATGTC +
Preference number: 3 (lower is better)
Translates to: FQGNHRETRSTC*DCGLQALSSDV
Trigger: GACATCAGAAGATAAGGCTTGCAAACCACAGTCCCAACAAGTTGACCTTGTCTCCCTATGATTTCCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGATGCTGGGAATAAATTaGGTTTCCCTGAATATGGTT +
Preference number: 3 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLMLGIN*VSLNMV
Trigger: AACCATATTCAGGGAAACCAAATTTATTCCCAGCAT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR TCA 72 bp GCAGCAGGTTGTAATCACACAGATATACTCCCAGTTTaGCCCAATGATCCTAAGCCAAGGAGAGGATTTTTA +
Preference number: 3 (lower is better)
Translates to: AAGCNHTDILPV*PNDPKPRRGFL
Trigger: TAAAAATCCTCTCCTTGGCTTAGGATCATTGGGTCAAACTGGGAGTATATCTGTGTGATTACAACCTGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTAAGAGAATGACCAGTTaGGTTTGTGAATGTCAGGCT +
Preference number: 3 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVKRMTS*VCECQA
Trigger: AGCCTGACATTCACAAACCAAACTGGTCATTCTCTT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTAGTAGGTGTCTCTATTaGGTTTTGACTCTGGTGCTT +
Preference number: 3 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVSRCLY*VLTLVL
Trigger: AAGCACCAGAGTCAAAACCAAATAGAGACACCTACT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp TTTTCTACCAAACGCATTAATACCATCTCTCTTACTTCAAGTCAAGGCACTGAATCTTACCATGTGGAATaGTGGTCTGGAAAGGGCGAC +
Preference number: 3 (lower is better)
Translates to: FSTKRINTISLTSSQGTESYHVE*WSGKGD
Trigger: GTCGCCCTTTCCAGACCACAATTCCACATGGTAAGA...TTCAGTGCCTTGACTTGAAGTAAGAGAGATGGTATTAATGCGTTTGGTAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR-3UTR CAA 90 bp CTGCCCCAGATATATCAACCATCCATTATCCAATTTTTGGTTGGGACAGTACATGTTTGGGGTACAATGTaGGGATCTGTAGGTGGTATA +
Preference number: 3 (lower is better)
Translates to: LPQIYQPSIIQFLVGTVHVWGTM*GSVGGI
Trigger: TATACCACCTACAGATCCCAACATTGTACCCCAAAC...ATGTACTGTCCCAACCAAAAATTGGATAATGGATGGTTGATATATCTGGGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTATGCTGGGAATAAATTaGGTTTCCCTGAATATGGTT +
Preference number: 3 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVMLGIN*VSLNMV
Trigger: AACCATATTCAGGGAAACCAAATTTATTCCCAGCAT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTAATAGTGCTGCTTTaGAGAAATCTCGATGTAGAT +
Preference number: 3 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLIVLL*RNLDVD
Trigger: ATCTACATCGAGATTTCTCAAAAGCAGCACTATTAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACAGAGGCCAGGGATGTaGCTAACATCCTACAATACA +
Preference number: 3 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLQRPGM*LTSYNT
Trigger: TGTATTGTAGGATGTTAGCAACATCCCTGGCCTCTG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAACTAAACTTGTTATGTaGACAACCATGTTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLTKLVM*TTMFPG
Trigger: TCCAGGGAACATGGTTGTCAACATAACAAGTTTAGT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATTGAGTGTGGCCCAATaGATAGAAATAGTTTACCAT +
Preference number: 3 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLLSVAQ*IEIVYH
Trigger: ATGGTAAACTATTTCTATCAATTGGGCCACACTCAA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAATAAGGGACAAGTGTTaGGCATCTATTGACATAATC +
Preference number: 3 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLIRDKC*ASIDII
Trigger: GATTATGTCAATAGATGCCAAACACTTGTCCCTTAT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACTCTTTCACTCATCTTaGTTCTCCTCAAAATTACTG +
Preference number: 3 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLLFHSS*FSSKLL
Trigger: CAGTAATTTTGAGGAGAACAAAGATGAGTGAAAGAG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATTGACTTCTTTTGCATaGCCCTGTGTGAGCCAACAT +
Preference number: 3 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLTSFA*PCVSQH
Trigger: ATGTTGGCTCACACAGGGCAATGCAAAAGAAGTCAA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACAGACCCTACTGGGTTaGAACAGTAATATACTGTGT +
Preference number: 3 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLQTLLG*NSNILC
Trigger: ACACAGTATATTACTGTTCAAACCCAGTAGGGTCTG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAAGATCCCTAGAAACTTaGAGGGAAAGGAGTTGGATT +
Preference number: 3 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLRSLET*RERSWI
Trigger: AATCCAACTCCTTTCCCTCAAAGTTTCTAGGGATCT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAATGACTGGAGACATTTaGATTGTCATTACTAGGAGG +
Preference number: 3 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLMTGDI*IVITRR
Trigger: CCTCCTAGTAATGACAATCAAAATGTCTCCAGTCAT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACTAATAGTGCTGCTTTaGAGAAATCTCGATGTAGAT +
Preference number: 3 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLIVLL*RNLDVD
Trigger: ATCTACATCGAGATTTCTCAAAAGCAGCACTATTAG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR TCA 72 bp TGTCTCTATTTGGTTTTGACTCTGGTGCTTTTCTGGTaGGTTATAGATACCTTGTATCATGTTAAGGATATT +
Preference number: 3 (lower is better)
Translates to: CLYLVLTLVLFW*VIDTLYHVKDI
Trigger: AATATCCTTAACATGATACAAGGTATCTATAACTCACCAGAAAAGCACCAGAGTCAAAACCAAATAGAGACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACTCCGGCCGCTTCTCTaGGCCCTCTGGTCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYELRPLL*ALWSRR
Trigger: GCGCCGCGACCAGAGGGCCCAGAGAAGCGGCCGGAG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAACGCCTCTAGCCGCCTaGCAGCCCGGGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYETPLAA*QPGKLR
Trigger: CCTCAGCTTCCCGGGCTGGCAGGCGGCTAGAGGCGT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACTTCCCCGGCAAAGCTaGGAGGTGAAGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYELPRQS*EVKGAG
Trigger: CCCCGCCCCCTTCACCTCCCAGCTTTGCCGGGGAAG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273666.10
CDS-3UTR GCA 90 bp GCACCCTCATTGATCAAAAATTGGAGCTGTAGGACAGCTGCACCACTTTCATGTACGCCTCTAGCCGCCTaGCAGCCCGGGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: APSLIKNWSCRTAAPLSCTPLAA*QPGKLR
Trigger: CCTCAGCTTCCCGGGCTGGCAGGCGGCTAGAGGCGT...ACATGAAAGTGGTGCAGCTGTCCTACAGCTCCAATTTTTGATCAATGAGGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGGCCGGCCCCTAGCTTaGCCCGCCCTGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLGRPLA*PALLLP
Trigger: GGGAAGAAGCAGGGCGGGGCAAGCTAGGGGCCGGCC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273666.10
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTACGCCTCTAGCCGCCTaGCAGCCCGGGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVTPLAA*QPGKLR
Trigger: CCTCAGCTTCCCGGGCTGGCAGGCGGCTAGAGGCGT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACTTCTCTGGGCCCTCTaGTCGCGGCGCCTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLLLWAL*SRRLAL
Trigger: GAGCGCCAGGCGCCGCGACCAGAGGGCCCAGAGAAG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCCTGAATTTCCTCTCTaGGAACCCCTGCAGTCCCCG +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLPEFPL*EPLQSP
Trigger: CGGGGACTGCAGGGGTTCTCAGAGAGGAAATTCAGG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCACTGTTACTGCCACTaGTGCTACCACTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLHCYCH*CYHCQG
Trigger: CCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACAGTG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACGCAAGGCTGCGGGATaGTTTTCCTGCCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYERKAAG*FSCRSF
Trigger: GAAGCTTCGGCAGGAAAAGCATCCCGCAGCCTTGCG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAATGTGTTGCGCAAGGCTaGGGGATGCTTTTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYECVAQG*GMLFLP
Trigger: CGGCAGGAAAAGCATCCCGCAGCCTTGCGCAACACA...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGGTCCAGGAATGTGTTaGGCAAGGCTGCGGGATGCT +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEGPGMC*ARLRDA
Trigger: AGCATCCCGCAGCCTTGCGCAACACATTCCTGGACC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CAACCATCCATTATCCAATTTTTGGTTGGGACAGTACATAACTACAGCTTACAACTCCGGCCGCTTCTCTaGGCCCTCTGGTCGCGGCGC +
Preference number: 4 (lower is better)
Translates to: QPSIIQFLVGTVHNYSLQLRPLL*ALWSRR
Trigger: GCGCCGCGACCAGAGGGCCCAGAGAAGCGGCCGGAG...TTGTAAGCTGTAGTTATGTACTGTCCCAACCAAAAATTGGATAATGGATGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGGCCTTTCGAAATGGTaGTCTTCCAGGACCCCAGCG +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLGLSKW*SSRTPA
Trigger: CGCTGGGGTCCTGGAAGACCACCATTTCGAAAGGCC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCTGACCACTCAGAACTaGGGCTGGAGCACCAGCCAA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLTTQN*GWSTSQ
Trigger: TTGGCTGGTGCTCCAGCCCCAGTTCTGAGTGGTCAG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGAGAAGGAAGCTGGGCTaGGAGATCTGGAAACGGAGG +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLRRKLG*EIWKRR
Trigger: CCTCCGTTTCCAGATCTCTCAGCCCAGCTTCCTTCT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCACCACCACTGTTACTaGCACTGCTGCTACCACTGC +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLHHHCY*HCCYHC
Trigger: GCAGTGGTAGCAGCAGTGGCAGTAACAGTGGTGGTG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACACCACCACTGTTACTaGCACTGCTGCTACCACTGC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEHHHCY*HCCYHC
Trigger: GCAGTGGTAGCAGCAGTGGCAGTAACAGTGGTGGTG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCTGGGCCTTTCGAAATaGTGGTCTTCCAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLGLSK*WSSRTP
Trigger: TGGGGTCCTGGAAGACCACCATTTCGAAAGGCCCAG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp TTGGGACAGTACATAACTACAGCTTACAAAACAGGGATGTGGGTTGGTAGGAAGCCTGAATTTCCTCTCTaGGAACCCCTGCAGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LGQYITTAYKTGMWVGRKPEFPL*EPLQSP
Trigger: CGGGGACTGCAGGGGTTCTCAGAGAGGAAATTCAGG...CTTCCTACCAACCCACATCCCTGTTTTGTAAGCTGTAGTTATGTACTGTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR TCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGACAGAGGACAGAGGTaGAGAAGCTGTGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEDRGQR*RSCESH
Trigger: GTGGCTTTCACAGCTTCTTCACCTCTGTCCTCTGTC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGATCAAGTGCAATCCGTaGACGGGTCAGCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLIKCNP*TGQLSH
Trigger: ATGGGAGAGCTGACCCGTGCACGGATTGCACTTGAT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACTTCTCTGGGCCCTCTaGTCGCGGCGCCTGGCGCTC +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLLWAL*SRRLAL
Trigger: GAGCGCCAGGCGCCGCGACCAGAGGGCCCAGAGAAG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTGGGGCCCTAAAGTCTaGGGCTCAGTGAAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLWGPKV*GSVKCK
Trigger: CTTACACTTCACTGAGCCCCAGACTTTAGGGCCCCA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAATGGGGCCCTAAAGTCTaGGGCTCAGTGAAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEWGPKV*GSVKCK
Trigger: CTTACACTTCACTGAGCCCCAGACTTTAGGGCCCCA...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGAGCAGAACAGGTACCTaGTACCCATGTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLSRTGT*YPCLLQ
Trigger: CTGGAGGAGACATGGGTACCAGGTACCTGTTCTGCT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAATGCAGTCAAGAAGGGTaGGCCAACAGCAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYECSQEG*ANSRGK
Trigger: TTTCCCTCTGCTGTTGGCCCACCCTTCTTGACTGCA...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCCAGAACTGCAACTCTaGGAAGTTGGACTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLPELQL*EVGLVQ
Trigger: CTGCACAAGTCCAACTTCTCAGAGTTGCAGTTCTGG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTCCATGCAGGCTGCTaGCTGGGCCTTTCGAAATGG +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLHAGC*LGLSKW
Trigger: CCATTTCGAAAGGCCCAGTCAGCAGCCTGCATGGAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGACCAGTTTGGTTTGTaGATGTCAGGCTGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLDQFGL*MSGCKS
Trigger: GCTCTTGCAGCCTGACATTCACAAACCAAACTGGTC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGTAAAGAAATCTCCATaGAGGCTGCTGACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLVKKSP*RLLTGP
Trigger: AGGCCCAGTCAGCAGCCTGCATGGAGATTTCTTTAC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCGCAAGGCTGCGGGATaGTTTTCCTGCCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVRKAAG*FSCRSF
Trigger: GAAGCTTCGGCAGGAAAAGCATCCCGCAGCCTTGCG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTGTGGAATTGTGGTCTaGAAAGGGCGACTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLCGIVV*KGRLGL
Trigger: AAGCCCAAGTCGCCCTTTCCAGACCACAATTCCACA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACCCTTCTATACTACCTaGTCCAGGAATGTGTTGCGC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEPFYTT*SRNVLR
Trigger: GCGCAACACATTCCTGGACCAGGTAGTATAGAAGGG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGATCTTGACAATGATTaGGGCCCTAAAGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLDLDND*GPKVWG
Trigger: GCCCCAGACTTTAGGGCCCCAATCATTGTCAAGATC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGATCTTGACAATGATTaGGGCCCTAAAGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEDLDND*GPKVWG
Trigger: GCCCCAGACTTTAGGGCCCCAATCATTGTCAAGATC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCACCACAAGTATTTCTaGCACCCAGGACAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLHHKYF*HPGQCA
Trigger: TGCACACTGTCCTGGGTGCCAGAAATACTTGTGGTG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTACTCAGAACTGGGGCTaGAGCACCAGCCAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVTQNWG*STSQGR
Trigger: TCTGCCTTGGCTGGTGCTCCAGCCCCAGTTCTGAGT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTGACCACTCAGAACTaGGGCTGGAGCACCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLTTQN*GWSTSQ
Trigger: TTGGCTGGTGCTCCAGCCCCAGTTCTGAGTGGTCAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp TCTTACCATGTGGAATTGTGGTCTGGAAAGGGCGACTTGGGCTTTTCAGGTTCCCCAAGGCACCCTCATTaGTCAAAAATTGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SYHVELWSGKGDLGFSGSPRHPH*SKIGAV
Trigger: TACAGCTCCAATTTTTGATCAATGAGGGTGCCTTGG...GGAACCTGAAAAGCCCAAGTCGCCCTTTCCAGACCACAATTCCACATGGTAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCTGAATGGCTGCACATaGACTGTTTGCCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLNGCT*TVCPHD
Trigger: ATCATGAGGGCAAACAGTTCATGTGCAGCCATTCAG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTAGAAGGAAGCTGGGCTaGGAGATCTGGAAACGGAGG +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVRRKLG*EIWKRR
Trigger: CCTCCGTTTCCAGATCTCTCAGCCCAGCTTCCTTCT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCACAGCTCCTTTCAATaGGAGGAATGTACCACTTGG +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLHSSFQ*EECTTW
Trigger: CCAAGTGGTACATTCCTCTCATTGAAAGGAGCTGTG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACTGAAGAAAATGCTTTaGGGTGACCCAACCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYELKKML*GDPTLH
Trigger: ATGCAGGGTTGGGTCACCTCAAAGCATTTTCTTCAG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCTGAAGAAAATGCTTTaGGGTGACCCAACCCTGCAT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLKKML*GDPTLH
Trigger: ATGCAGGGTTGGGTCACCTCAAAGCATTTTCTTCAG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTTGCATTGCCCTGTGTaGGCCAACATGGTCAAGTTA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLHCPV*ANMVKL
Trigger: TAACTTGACCATGTTGGCTCACACAGGGCAATGCAA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACACTGCTGCTACCACTaGCAGGGGAGGAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLHCCYH*QGRRQL
Trigger: TAACTGCCTCCTCCCCTGGCAGTGGTAGCAGCAGTG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATGTTACTGCCACTGCTaGTACCACTGCCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLCYCHC*YHCQGR
Trigger: CCTCCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCCACAGCCAACCCATTaGAGTTCCCAAATGCAACTA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLPQPTH*SSQMQL
Trigger: TAGTTGCATTTGGGAACTGCAATGGGTTGGCTGTGG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGTTAGCACAAAAGCATaGCAAGCAGGCACTGCTACA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLVSTKA*QAGTAT
Trigger: TGTAGCAGTGCCTGCTTGGCATGCTTTTGTGCTAAC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGCGGGATGCTTTTCCTaGCGAAGCTTCCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVAGCFS*RSFPKE
Trigger: CTCTTTGGGGAAGCTTCGGCAGGAAAAGCATCCCGC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATGTGTTGCGCAAGGCTaGGGGATGCTTTTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLCVAQG*GMLFLP
Trigger: CGGCAGGAAAAGCATCCCGCAGCCTTGCGCAACACA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGAGGTGACCCAACCCTaGATGGTTTGTGCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEEVTQP*MVCAKN
Trigger: GTTTTTAGCACAAACCATGCAGGGTTGGGTCACCTC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAATGTTCCCTGGAATGGTaGATACTAGAGGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYECSLEW*ILEVLL
Trigger: GAGCAGTACCTCTAGTATGCACCATTCCAGGGAACA...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTGGGCCTTTCGAAATaGTGGTCTTCCAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLGLSK*WSSRTP
Trigger: TGGGGTCCTGGAAGACCACCATTTCGAAAGGCCCAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGAGGAATGTACCACTTaGCAATACCATGACTGGCTC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEEECTT*QYHDWL
Trigger: GAGCCAGTCATGGTATTGCCAAGTGGTACATTCCTC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCTGTTCACAGGAGTCTaGGAGATTCAGAGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLFTGV*EIQRGF
Trigger: AAAGCCTCTCTGAATCTCCCAGACTCCTGTGAACAG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACTAGGAGGTTCTTACTaGCATCTAGTAGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYELGGSY*HLVDRG
Trigger: GCCTCTGTCTACTAGATGCCAGTAAGAACCTCCTAG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAACAAGGTCAACTTGTTaGGACTGTGGTTTGCAAGCC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYETRSTC*DCGLQA
Trigger: GGCTTGCAAACCACAGTCCCAACAAGTTGACCTTGT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCCATGTTCCCTGGAATaGTGCATACTAGAGGTACTG +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLPCSLE*CILEVL
Trigger: CAGTACCTCTAGTATGCACCATTCCAGGGAACATGG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp TTGGGACAGTACATAACTACAGCTTACAAAACAGGGATGTGGGTTGGTAGGAAGGTATTGGGGGTTAGCTaGGGGTGTGTGGACAGAACT +
Preference number: 4 (lower is better)
Translates to: LGQYITTAYKTGMWVGRKVLGVS*GCVDRT
Trigger: AGTTCTGTCCACACACCCCCAGCTAACCCCCAATAC...CTTCCTACCAACCCACATCCCTGTTTTGTAAGCTGTAGTTATGTACTGTCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR TCA 90 bp ACCAGGTCTCCCGAGTATTCGTATAGCACCTGTTCTCGTCCCAATAGCCAAGATGAAGTCAAAGTTTCCTaGATTTCCTCTCTGAGAACC +
Preference number: 4 (lower is better)
Translates to: TRSPEYSYSTCSRPNSQDEVKVS*ISSLRT
Trigger: GGTTCTCAGAGAGGAAATTCAGGAAACTTTGACTTC...ATCTTGGCTATTGGGACGAGAACAGGTGCTATACGAATACTCGGGAGACCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGATGAAGTGTATCATCTaGACTTGCACTGACCAAGGC +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLMKCII*TCTDQG
Trigger: GCCTTGGTCAGTGCAAGTTCAGATGATACACTTCAT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAACAACTGGACCTGGATaGGTCTTAGTGGATAGTTCA +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYETTGPG*VLVDSS
Trigger: TGAACTATCCACTAAGACTCATCCAGGTCCAGTTGT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGAGTCAAACTACCATCTaGATGGCTGCACATGAACTG +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLSQTTI*MAAHEL
Trigger: CAGTTCATGTGCAGCCATTCAGATGGTAGTTTGACT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGAGTCTGAGAAGGCAGTaGGAAGACTTTGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLSLRRQ*EDFGLF
Trigger: AAACAAGCCAAAGTCTTCTCACTGCCTTCTCAGACT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGAGGTGAAGAAGCTGTaGAAGCCACCACGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVEVKKL*KPPRFS
Trigger: GGAGAAACGTGGTGGCTTTCACAGCTTCTTCACCTC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGACAGAGGACAGAGGTaGAGAAGCTGTGAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVDRGQR*RSCESH
Trigger: GTGGCTTTCACAGCTTCTTCACCTCTGTCCTCTGTC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAAAAAATGGAGTTGCATaGCAGAGGACAGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEKNGVA*QRTEVK
Trigger: CTTCACCTCTGTCCTCTGTCATGCAACTCCATTTTT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGATCCGGAGGACAATCTaGAAAGTATGCTGTGCATGT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLIRRTI*KVCCAC
Trigger: ACATGCACAGCATACTTTGCAGATTGTCCTCCGGAT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGGTCAATGGTCCCCATaGTTAACAGTACTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLGQWSP*LTVLSS
Trigger: AGAAGACAGTACTGTTAAGCATGGGGACCATTGACC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGGTCAATGGTCCCCATaGTTAACAGTACTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEGQWSP*LTVLSS
Trigger: AGAAGACAGTACTGTTAAGCATGGGGACCATTGACC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGACGTTTTCCAGAACTaGAACTCTGAGAAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLDVFQN*NSEKLD
Trigger: GTCCAACTTCTCAGAGTTGCAGTTCTGGAAAACGTC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGACTTCATATGGCGGTTaGATTAATCCACCCATTCGG +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLTSYGG*INPPIR
Trigger: CCGAATGGGTGGATTAATGCAACCGCCATATGAAGT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGCGGGATGCTTTTCCTaGCGAAGCTTCCCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLAGCFS*RSFPKE
Trigger: CTCTTTGGGGAAGCTTCGGCAGGAAAAGCATCCCGC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAATTTGGAAAATGCTTCTaGACTGGTCATCATGCCTGC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEFGKCF*TGHHAC
Trigger: GCAGGCATGATGACCAGTGCAGAAGCATTTTCCAAA...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGAGTTGATGGAGCACTaGCTGGTCAGAAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEELMEH*LVRNSQ
Trigger: TTGAGAATTTCTGACCAGGCAGTGCTCCATCAACTC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp TTGGGACAGTACATAACTACAGCTTACAAAACAGGGATGTGGGTTGGTAGGAAGTGTGGAATTGTGGTCTaGAAAGGGCGACTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LGQYITTAYKTGMWVGRKCGIVV*KGRLGL
Trigger: AAGCCCAAGTCGCCCTTTCCAGACCACAATTCCACA...CTTCCTACCAACCCACATCCCTGTTTTGTAAGCTGTAGTTATGTACTGTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGACCGTGGTTGTCGCTaGTATAAGTCACTTGATCTA +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEDRGCR*YKSLDL
Trigger: TAGATCAAGTGACTTATACCAGCGACAACCACGGTC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTATGCAGGCTGCTGACTaGGCCTTTCGAAATGGTGGT +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVMQAAD*AFRNGG
Trigger: ACCACCATTTCGAAAGGCCCAGTCAGCAGCCTGCAT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GCACCCTCATTGATCAAAAATTGGAGCTGTAGGACAGCTGCACCACTTTCATGTATGAAGTGTATCATCTaGACTTGCACTGACCAAGGC +
Preference number: 4 (lower is better)
Translates to: APSLIKNWSCRTAAPLSCMKCII*TCTDQG
Trigger: GCCTTGGTCAGTGCAAGTTCAGATGATACACTTCAT...ACATGAAAGTGGTGCAGCTGTCCTACAGCTCCAATTTTTGATCAATGAGGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTTCCAAGCTCCTCCACTaGTTGGCCACTCCTTATTAC +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVSKLLH*LATPYY
Trigger: GTAATAAGGAGTGGCCAATCAGTGGAGGAGCTTGGA...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCCAGCGATTTACTTTTaGAACATCGGCACTAGAAAG +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLPAIYF*NIGTRK
Trigger: CTTTCTAGTGCCGATGTTTCAAAAGTAAATCGCTGG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGTAGGTTTAAGGAGATaGTTAACACCATTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEVGLRR*LTPFPD
Trigger: GTCTGGGAATGGTGTTAATCATCTCCTTAAACCTAC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTTGGGATGCAGAAGATaGGTTCATTACCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLGCRR*VHYHFP
Trigger: AGGAAAGTGGTAATGAACTCATCTTCTGCATCCCAA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGACCAGTTTGGTTTGTaGATGTCAGGCTGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVDQFGL*MSGCKS
Trigger: GCTCTTGCAGCCTGACATTCACAAACCAAACTGGTC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGTCTCTATTTGGTTTTaGCTCTGGTGCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLVSIWF*LWCFSG
Trigger: ACCAGAAAAGCACCAGAGTCAAAACCAAATAGAGAC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCAGGAGTTTGTGAGATaGAGTTACCCTTACGTTAAG +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLQEFVR*SYPYVK
Trigger: CTTAACGTAAGGGTAACTTCATCTCACAAACTCCTG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAATCCATCTGTGCATCTaGTTCCTTAAAGCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEIHLCI*FLKASF
Trigger: GAAAGAGGCTTTAAGGAATCAGATGCACAGATGGAT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAATGATTATTAAGAGTTaGTGGAGCACTGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEMIIKS*WSTAWS
Trigger: TGACCAGGCAGTGCTCCATCAACTCTTAATAATCAT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp TTTTCTACCAAACGCATTAATACCATCTCTCTTACTTCAAGTCAAGGCACTGAATGTTACTGCCACTGCTaGTACCACTGCCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FSTKRINTISLTSSQGTECYCHC*YHCQGR
Trigger: CCTCCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACA...TTCAGTGCCTTGACTTGAAGTAAGAGAGATGGTATTAATGCGTTTGGTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR GCA 90 bp TTTTCTACCAAACGCATTAATACCATCTCTCTTACTTCAAGTCAAGGCACTGAACACTGTTACTGCCACTaGTGCTACCACTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: FSTKRINTISLTSSQGTEHCYCH*CYHCQG
Trigger: CCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACAGTG...TTCAGTGCCTTGACTTGAAGTAAGAGAGATGGTATTAATGCGTTTGGTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR GCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGAGCTTGTACAGCATCTaGAGAGTTATTGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLSLYSI*RVIAEA
Trigger: TGCTTCTGCAATAACTCTGCAGATGCTGTACAAGCT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGAGAAGTTGGACTTGTaGAGTGTCCATTTACATGGT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLEKLDL*SVHLHG
Trigger: ACCATGTAAATGGACACTGCACAAGTCCAACTTCTC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAATCAAGTGCAATCCGTaGACGGGTCAGCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLIKCNP*TGQLSH
Trigger: ATGGGAGAGCTGACCCGTGCACGGATTGCACTTGAT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAATCACCACGATCTTCTTaGACCAAATTGGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYESPRSS*TKLVLP
Trigger: AGGAAGTACCAATTTGGTGCAAGAAGATCGTGGTGA...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACGGAGGACTTGTTTCTaGTTCAGGGGTAATAATATC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYERRTCF*FRGNNI
Trigger: GATATTATTACCCCTGAACCAGAAACAAGTCCTCCG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATGGAGGCATTCGCACTaGCCGTGTCTTCACATTGAG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLWRHSH*PCLHIE
Trigger: CTCAATGTGAAGACACGGCCAGTGCGAATGCCTCCA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATTCTGCTTGATATCCTaGAGGCATTCGCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLFCLIS*RHSHWP
Trigger: CGGCCAGTGCGAATGCCTCCAGGATATCAAGCAGAA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGACTAGTAATCTGTTGTaGAGGTTCACCATCTACCCA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLTSNLL*RFTIYP
Trigger: TGGGTAGATGGTGAACCTCCACAACAGATTACTAGT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAATGCAGGCTGCTGACTaGGCCTTTCGAAATGGTGGT +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLMQAAD*AFRNGG
Trigger: ACCACCATTTCGAAAGGCCCAGTCAGCAGCCTGCAT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGCAGTGAGAAGACTTTaGCTTGTTTTTCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLAVRRL*LVFLSR
Trigger: TCTGCTCAGAAAAACAAGCCAAAGTCTTCTCACTGC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGCAGTGAGAAGACTTTaGCTTGTTTTTCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEAVRRL*LVFLSR
Trigger: TCTGCTCAGAAAAACAAGCCAAAGTCTTCTCACTGC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGAATTCAGCCGTATTTTaGGATTTTAACCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLNSAVF*DFNQGS
Trigger: GGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAAACTTGTTGGGACTGTaGTTTGCAAGCCTTATCTTC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYENLLGL*FASLIF
Trigger: GAAGATAAGGCTTGCAAACCACAGTCCCAACAAGTT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCTTCTTGCACCAAATTaGTACTTCCTCCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLLAPN*YFLLLF
Trigger: GAAAAGGAGGAGGAAGTACCAATTTGGTGCAAGAAG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAAGCAGAACAGGTACCTaGTACCCATGTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLSRTGT*YPCLLQ
Trigger: CTGGAGGAGACATGGGTACCAGGTACCTGTTCTGCT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGAAATCCAAGTGGCCCTaGGAGCTTTTGATTGAGATA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLKSKWP*ELLIEI
Trigger: TATCTCAATCAAAAGCTCCCAGGGCCACTTGGATTT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAACCCTTTCAGGGCACTaGATGTCATATAGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYETLSGH*MSYRKL
Trigger: TAACTTCCTATATGACATCCAGTGCCCTGAAAGGGT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp ACCAGGTCTCCCGAGTATTCGTATAGCACCTGTTCTCGTCCCAATAGCCAAGATATACATCTTACCATGTaGAATTGTGGTCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: TRSPEYSYSTCSRPNSQDIHLTM*NCGLER
Trigger: CCTTTCCAGACCACAATTCCACATGGTAAGATGTAT...ATCTTGGCTATTGGGACGAGAACAGGTGCTATACGAATACTCGGGAGACCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR CCA 90 bp TTGGGACAGTACATAACTACAGCTTACAAAACAGGGATGTGGGTTGGTAGGAAGTTAGCTGGGGGTGTGTaGACAGAACTTATCCCCTAT +
Preference number: 4 (lower is better)
Translates to: LGQYITTAYKTGMWVGRKLAGGV*TELIPY
Trigger: ATAGGGGATAAGTTCTGTCCACACACCCCCAGCTAA...CTTCCTACCAACCCACATCCCTGTTTTGTAAGCTGTAGTTATGTACTGTCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR CAA 72 bp TGCAAGAGCACCTTTCGATTGCAGACCCTACTGGGTTaGAACAGTAATATACTGTGTAACTGGCAGACAAGG +
Preference number: 4 (lower is better)
Translates to: CKSTFRLQTLLG*NSNILCNWQTR
Trigger: CCTTGTCTGCCAGTTACACAGTATATTACTGTTCAAACCCAGTAGGGTCTGCAATCGAAAGGTGCTCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CAA 72 bp CATAGGGAGACAAGGTCAACTTGTTGGGACTGTGGTTaGCAAGCCTTATCTTCTGATGTCGCTTTAGCAGAT +
Preference number: 4 (lower is better)
Translates to: HRETRSTCWDCG*QALSSDVALAD
Trigger: ATCTGCTAAAGCGACATCAGAAGATAAGGCTTGCAAACCACAGTCCCAACAAGTTGACCTTGTCTCCCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CAA 72 bp CCATGTCCTTCCTCACCACGATCTTCTTGCACCAAATaGGTACTTCCTCCTCCTTTTCTAAGACAGACCTTA +
Preference number: 4 (lower is better)
Translates to: PCPSSPRSSCTK*VLPPPFLRQTL
Trigger: TAAGGTCTGTCTTAGAAAAGGAGGAGGAAGTACCAATTTGGTGCAAGAAGATCGTGGTGAGGAAGGACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
3UTR CAA 72 bp AGTGATAATCAACTTTGGCTGGACATTAGAACCGCCTaGGAGGCTTTCGCAAATATTGGTGTCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SDNQLWLDIRTA*EAFANIGVWFP
Trigger: TGGGAACCAGACACCAATATTTGCGAAAGCCTCCAAGGCGGTTCTAATGTCCAGCCAAAGTTGATTATCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACCTGAATTTCCTCTCTaGGAACCCCTGCAGTCCCCG +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLPEFPL*EPLQSP
Trigger: CGGGGACTGCAGGGGTTCTCAGAGAGGAAATTCAGG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACACCAGAGAATATTATaGATGGTTCGCTGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEHQRIL*MVRCFC
Trigger: GCAAAAACAGCGAACCATTCATAATATTCTCTGGTG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTTGCTTTTCCATGCATaGTGGTTAAACTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLLFHA*WLNLVF
Trigger: GAAGACCAAGTTTAACCATCATGCATGGAAAAGCAA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATCCAAGCTCCTCCACTaGTTGGCCACTCCTTATTAC +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLSKLLH*LATPYY
Trigger: GTAATAAGGAGTGGCCAATCAGTGGAGGAGCTTGGA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTCTTCAACATCATACTaGAGTCGTACCTCTAATGAC +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLSSTSY*SRTSND
Trigger: GTCATTAGAGGTACGACTTCAGTATGATGTTGAAGA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAAACTATTCCATATGCTaGGCTTACAGCAAGACTAGT +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYENYSIC*AYSKTS
Trigger: ACTAGTCTTGCTGTAAGCTCAGCATATGGAATAGTT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACCAGAACTGCAACTCTaGGAAGTTGGACTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLPELQL*EVGLVQ
Trigger: CTGCACAAGTCCAACTTCTCAGAGTTGCAGTTCTGG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAAGACCCTACTGGGTTTaGACAGTAATATACTGTGTA +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYERPYWV*TVIYCV
Trigger: TACACAGTATATTACTGTTCAAACCCAGTAGGGTCT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGTCTATAATGATGACTaGGACCAAGATAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLVYNDD*DQDSKQ
Trigger: CTGTTTGCTATCTTGGTCTCAGTCATCATTATAGAC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCTGGTGCTTTTCTGGTaGGTTATAGATACCTTGTAT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLVLFW*VIDTLY
Trigger: ATACAAGGTATCTATAACTCACCAGAAAAGCACCAG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTCCAAGACTAATGGATaGTTTCAAGGTAGGGACTAT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLSKTNG*FQGRDY
Trigger: ATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTAAGTCTGGGGCTCAGTaGAGTGTAAGAAGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVKSGAQ*SVRSKV
Trigger: GACTTTGCTTCTTACACTTCACTGAGCCCCAGACTT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCTCTCAAAGTCATGGTaGTCCCTTCATGTAGATAAA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLSKSW*SLHVDK
Trigger: TTTATCTACATGAAGGGATCACCATGACTTTGAGAG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACTAAACTTGTTATGTTaGCAACCATGTTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYELNLLC*QPCSLE
Trigger: TTCCAGGGAACATGGTTGTCAACATAACAAGTTTAG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATGTTACTGCCACTGCTaGTACCACTGCCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLCYCHC*YHCQGR
Trigger: CCTCCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACACTGTTACTGCCACTaGTGCTACCACTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLHCYCH*CYHCQG
Trigger: CCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACAGTG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTTCATAACTTACTGGAATCAAATGGCAGAAATGGAAACAAGTGGGAGAATCTACACCACCACTGTTACTaGCACTGCTGCTACCACTGC +
Preference number: 4 (lower is better)
Translates to: LHNLLESNGRNGNKWENLHHHCY*HCCYHC
Trigger: GCAGTGGTAGCAGCAGTGGCAGTAACAGTGGTGGTG...TAGATTCTCCCACTTGTTTCCATTTCTGCCATTTGATTCCAGTAAGTTATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAAACCTATTAGCAGTTTaGCTTCATCTCTTGGGCTAT +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYENLLAV*LHLLGY
Trigger: ATAGCCCAAGAGATGAAGGCAAACTGCTAATAGGTT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAACCACCACATTTGCTTaGAGTATAAAAGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYETTTFA*SIKDVS
Trigger: GGAGACATCTTTTATACTGCAAGCAAATGTGGTGGT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGTTAGCACAAAAGCATaGCAAGCAGGCACTGCTACA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVVSTKA*QAGTAT
Trigger: TGTAGCAGTGCCTGCTTGGCATGCTTTTGTGCTAAC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTCCAGCCTTTGGGTTaGACAGTGTCTCTGATACAT +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLQPLG*TVSLIH
Trigger: ATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGAGGTGACCCAACCCTaGATGGTTTGTGCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVEVTQP*MVCAKN
Trigger: GTTTTTAGCACAAACCATGCAGGGTTGGGTCACCTC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTCATTGATCAAAAATTaGAGCTGTAGGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLSLIKN*SCRTAA
Trigger: TGCAGCTGTCCTACAGCTCCAATTTTTGATCAATGA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTACACCATTCCCAGACTaGTTCCAACGAACAGACAAG +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVTPFPD*FQRTDK
Trigger: CTTGTCTGTTCGTTGGAACCAGTCTGGGAATGGTGT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTCTGTTTTGAGCTTCTaGTGTCTCTATGGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLSVLSF*CLYGSK
Trigger: TTTACTCCCATAGAGACACCAGAAGCTCAAAACAGA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACACCACAAGTATTTCTaGCACCCAGGACAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLHHKYF*HPGQCA
Trigger: TGCACACTGTCCTGGGTGCCAGAAATACTTGTGGTG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCCATGTTCCCTGGAATaGTGCATACTAGAGGTACTG +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVPCSLE*CILEVL
Trigger: CAGTACCTCTAGTATGCACCATTCCAGGGAACATGG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTTCTTTCACTTCACTGTaGCTCCCATGTCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVSFTSL*LPCPSS
Trigger: TGAGGAAGGACATGGGAGCCACAGTGAAGTGAAAGA...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAACTCAGAACTGGGGCTaGAGCACCAGCCAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLTQNWG*STSQGR
Trigger: TCTGCCTTGGCTGGTGCTCCAGCCCCAGTTCTGAGT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp TCTTACCATGTGGAATTGTGGTCTGGAAAGGGCGACTTGGGCTTTTCAGGTTCCAATGCTTGTGATCTATaGGTCACCCATTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: SYHVELWSGKGDLGFSGSNACDL*VTHYRK
Trigger: TTTTCTGTAATGGGTGACCCATAGATCACAAGCATT...GGAACCTGAAAAGCCCAAGTCGCCCTTTCCAGACCACAATTCCACATGGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCCAAGGCACCCTCATTaGTCAAAAATTGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVPRHPH*SKIGAV
Trigger: TACAGCTCCAATTTTTGATCAATGAGGGTGCCTTGG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACTGAATGGCTGCACATaGACTGTTTGCCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLLNGCT*TVCPHD
Trigger: ATCATGAGGGCAAACAGTTCATGTGCAGCCATTCAG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAATCCCAAAATTTTATTaGTCCATCTGCATGACCAGT +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEIPKFY*SICMTS
Trigger: ACTGGTCATGCAGATGGATCAATAAAATTTTGGGAT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTATAACAAGTTCTGCTTaGTATCCTGGAGGCATTCGC +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVITSSA*YPGGIR
Trigger: GCGAATGCCTCCAGGATATCAAGCAGAACTTGTTAT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACACAGCTCCTTTCAATaGGAGGAATGTACCACTTGG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLHSSFQ*EECTTW
Trigger: CCAAGTGGTACATTCCTCTCATTGAAAGGAGCTGTG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTGTATGTTAACCGCTaGATTTCAGTAGGAGAGACG +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLYVNR*ISVGET
Trigger: CGTCTCTCCTACTGAAATTCAGCGGTTAACATACAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGAAGGTTCTAGTACAATaGAAGTTACAGATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLKVLVQ*KLQMRR
Trigger: TCTCCTCATCTGTAACTTTCATTGTACTAGAACCTT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGAGTACAAGCCAGGCTaGAGAAAATGCTTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLEYKPG*RKCFEV
Trigger: CACCTCAAAGCATTTTCTTCAGCCTGGCTTGTACTC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGTGGCTTATATTATTTaGCCTAGGGACAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEVAYII*PRDKSI
Trigger: AATGCTTTTGTCCCTAGGTCAAATAATATAAGCCAC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGATATACTCCCAGTTTaGCCCAATGATCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVDILPV*PNDPKP
Trigger: TGGCTTAGGATCATTGGGTCAAACTGGGAGTATATC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATTGCATTGCCCTGTGTaGGCCAACATGGTCAAGTTA +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLLHCPV*ANMVKL
Trigger: TAACTTGACCATGTTGGCTCACACAGGGCAATGCAA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTAAAAATGGAGTTGCATaGCAGAGGACAGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVKNGVA*QRTEVK
Trigger: CTTCACCTCTGTCCTCTGTCATGCAACTCCATTTTT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCTGGGAGCTTTTGATTaGGATAACAATCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLGAFD*DNNQKG
Trigger: TCCTTTTTGATTGTTATCTCAATCAAAAGCTCCCAG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTTGCCTTCATCTCTTGGGCTATCGCTTAAATGTACAACTGGACCTGGATGAGAACCTATTAGCAGTTTaGCTTCATCTCTTGGGCTAT +
Preference number: 4 (lower is better)
Translates to: VCLHLLGYRLNVQLDLDENLLAV*LHLLGY
Trigger: ATAGCCCAAGAGATGAAGGCAAACTGCTAATAGGTT...CTCATCCAGGTCCAGTTGTACATTTAAGCGATAGCCCAAGAGATGAAGGCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR GCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGATGGTTCGCTGTTTTTaGAGGTCTTGTATTCTACTT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLMVRCF*RSCILL
Trigger: AAGTAGAATACAAGACCTGCAAAAACAGCGAACCAT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTATCCGGAGGACAATCTaGAAAGTATGCTGTGCATGT +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVIRRTI*KVCCAC
Trigger: ACATGCACAGCATACTTTGCAGATTGTCCTCCGGAT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTTTCTGGATATGTTTGTaGTCCAAGGTTCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVFWICL*SKVPSS
Trigger: GGAGCTTGGAACCTTGGAGCACAAACATATCCAGAA...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAATACACAGAATATTCTaGTCTCTGGACACCAGTAAA +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEIHRIF*SLDTSK
Trigger: TTTACTGGTGTCCAGAGAGCAGAATATTCTGTGTAT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTTGAATAACAAGTTCTaGTTGATATCCTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLNNKF*LISWRH
Trigger: ATGCCTCCAGGATATCAAGCAGAACTTGTTATTCAA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACTCTTGAATTTACTGTaGTACTTCTGGTATCTTGTG +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYELLNLL*YFWYLV
Trigger: CACAAGATACCAGAAGTAGCACAGTAAATTCAAGAG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGACTGTCTTGCAAATCTaGAAATACTCCGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLTVLQI*KYSEVK
Trigger: TTTGACTTCGGAGTATTTCCAGATTTGCAAGACAGT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTTGCCTTCATCTCTTGGGCTATCGCTTAAATGTACAACTGGACCTGGATGAGAAACTACCATCTGAATaGCTGCACATGAACTGTTTG +
Preference number: 4 (lower is better)
Translates to: VCLHLLGYRLNVQLDLDEKLPSE*LHMNCL
Trigger: CAAACAGTTCATGTGCAGCCATTCAGATGGTAGTTT...CTCATCCAGGTCCAGTTGTACATTTAAGCGATAGCCCAAGAGATGAAGGCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTAGCTCCTCCACTGATTaGCCACTCCTTATTACTGTA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVSSSTD*PLLITV
Trigger: TACAGTAATAAGGAGTGGCCAATCAGTGGAGGAGCT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAATCTATATAGGTCAATaGTCCCCATGCTTAACAGTA +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEIYIGQ*SPCLTV
Trigger: TACTGTTAAGCATGGGGACCATTGACCTATATAGAT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCAGTGTCCATTTACATaGTCTGAGGTAGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVQCPFT*SEVGDL
Trigger: CAAGTCTCCTACCTCAGACCATGTAAATGGACACTG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAACACCATTCCCAGACTaGTTCCAACGAACAGACAAG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLTPFPD*FQRTDK
Trigger: CTTGTCTGTTCGTTGGAACCAGTCTGGGAATGGTGT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACCTCATGTCTGTCAGTaGCAAATAATTAACATCCAA +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEPHVCQ*QIINIQ
Trigger: TTGGATGTTAATTATTTGCCACTGACAGACATGAGG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCAACATATTACAGGATaGGTCCTGGAATGTGTATAT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLQHITG*VLECVY
Trigger: ATATACACATTCCAGGACCCATCCTGTAATATGTTG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACAACATATTACAGGATaGGTCCTGGAATGTGTATAT +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEQHITG*VLECVY
Trigger: ATATACACATTCCAGGACCCATCCTGTAATATGTTG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACTGTTCACAGGAGTCTaGGAGATTCAGAGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLLFTGV*EIQRGF
Trigger: AAAGCCTCTCTGAATCTCCCAGACTCCTGTGAACAG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAATTACTGTGCTACTTCTaGTATCTTGTGATGTCACAT +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYELLCYF*YLVMSH
Trigger: ATGTGACATCACAAGATACCAGAAGTAGCACAGTAA...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GCACCCTCATTGATCAAAAATTGGAGCTGTAGGACAGCTGCACCACTTTCATGTGAAGTATGGAAAGTTTaGGGTACAATGTTGGGATCT +
Preference number: 4 (lower is better)
Translates to: APSLIKNWSCRTAAPLSCEVWKV*GTMLGS
Trigger: AGATCCCAACATTGTACCCCAAACTTTCCATACTTC...ACATGAAAGTGGTGCAGCTGTCCTACAGCTCCAATTTTTGATCAATGAGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACCAAGGCACCCTCATTaGTCAAAAATTGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLPRHPH*SKIGAV
Trigger: TACAGCTCCAATTTTTGATCAATGAGGGTGCCTTGG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTTGCCTTCATCTCTTGGGCTATCGCTTAAATGTACAACTGGACCTGGATGAGCTAAGGTTCCACAAATaGAGTGTATCATCTGAACTT +
Preference number: 4 (lower is better)
Translates to: VCLHLLGYRLNVQLDLDELRFHK*SVSSEL
Trigger: AAGTTCAGATGATACACTTCATTTGTGGAACCTTAG...CTCATCCAGGTCCAGTTGTACATTTAAGCGATAGCCCAAGAGATGAAGGCAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAACAACTGGACCTGGATaGGTCTTAGTGGATAGTTCA +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLTTGPG*VLVDSS
Trigger: TGAACTATCCACTAAGACTCATCCAGGTCCAGTTGT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTGCCCCAGATATATCAACCATCCATTATCCAATTTTTGGTTGGGACAGTACATACAACTGGACCTGGATaGGTCTTAGTGGATAGTTCA +
Preference number: 4 (lower is better)
Translates to: LPQIYQPSIIQFLVGTVHTTGPG*VLVDSS
Trigger: TGAACTATCCACTAAGACTCATCCAGGTCCAGTTGT...ATGTACTGTCCCAACCAAAAATTGGATAATGGATGGTTGATATATCTGGGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR TCA 90 bp CTTGTGATCTATGGGTCACCCATTACAGAAAACATACCACTACTTTCCAAATGTCTGAATGGCTGCACATaGACTGTTTGCCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: LVIYGSPITENIPLLSKCLNGCT*TVCPHD
Trigger: ATCATGAGGGCAAACAGTTCATGTGCAGCCATTCAG...ACATTTGGAAAGTAGTGGTATGTTTTCTGTAATGGGTGACCCATAGATCACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAAGTCAAACTACCATCTaGATGGCTGCACATGAACTG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLSQTTI*MAAHEL
Trigger: CAGTTCATGTGCAGCCATTCAGATGGTAGTTTGACT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAATAACAAGTTCTGCTTaGTATCCTGGAGGCATTCGC +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLITSSA*YPGGIR
Trigger: GCGAATGCCTCCAGGATATCAAGCAGAACTTGTTAT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCCAGCGATTTACTTTTaGAACATCGGCACTAGAAAG +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVPAIYF*NIGTRK
Trigger: CTTTCTAGTGCCGATGTTTCAAAAGTAAATCGCTGG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTTTGGGATGCAGAAGATaGGTTCATTACCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLGCRR*VHYHFP
Trigger: AGGAAAGTGGTAATGAACTCATCTTCTGCATCCCAA...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCAGGAGTTTGTGAGATaGAGTTACCCTTACGTTAAG +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVQEFVR*SYPYVK
Trigger: CTTAACGTAAGGGTAACTTCATCTCACAAACTCCTG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTATGATTATTAAGAGTTaGTGGAGCACTGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVMIIKS*WSTAWS
Trigger: TGACCAGGCAGTGCTCCATCAACTCTTAATAATCAT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACATGCCGAACTGTCTTaGAAATCTGGAAATACTCCG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLHAELS*KSGNTP
Trigger: CGGAGTATTTCCAGATTTGCAAGACAGTTCGGCATG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGTAATTGCTTTTCCATaGATGATGGTTAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEVIAFP*MMVKLG
Trigger: ACCAAGTTTAACCATCATGCATGGAAAAGCAATTAC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATTTGGAAAATGCTTCTaGACTGGTCATCATGCCTGC +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLFGKCF*TGHHAC
Trigger: GCAGGCATGATGACCAGTGCAGAAGCATTTTCCAAA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAAAGGACTCTGAGAAATaGTATCCTAGTGTACATTAT +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEKDSEK*YPSVHY
Trigger: ATAATGTACACTAGGATAGCATTTCTCAGAGTCCTT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAACTCATCAAATGTACTaGTACTTTGGACTGAATTTC +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYETHQMY*YFGLNF
Trigger: GAAATTCAGTCCAAAGTAGCAGTACATTTGATGAGT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGTGTGTGTGTGTGCGTaGGTGCTAAGGTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLVCVCA*VLRSVQ
Trigger: TTGCACTGACCTTAGCACGCACGCACACACACACAC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGTAAAGATGAGACTATaGAAAGGATTACATGGATCA +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEVKMRL*KGLHGS
Trigger: TGATCCATGTAATCCTTTGCATAGTCTCATCTTTAC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCAAGGTAGGGACTATTaGTCACGTTATTATCAGGGA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVQGRDY*SRYYQG
Trigger: TCCCTGATAATAACGTGAGCAATAGTCCCTACCTTG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTTCACCACGATCTTCTTaGACCAAATTGGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVSPRSS*TKLVLP
Trigger: AGGAAGTACCAATTTGGTGCAAGAAGATCGTGGTGA...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGAGAGAATATTATGAATaGTTCGCTGTTTTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLREYYE*FAVFAG
Trigger: ACCTGCAAAAACAGCGAACCATTCATAATATTCTCT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATTCTGCTTGATATCCTaGAGGCATTCGCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLFCLIS*RHSHWP
Trigger: CGGCCAGTGCGAATGCCTCCAGGATATCAAGCAGAA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTACTAGTAATCTGTTGTaGAGGTTCACCATCTACCCA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVTSNLL*RFTIYP
Trigger: TGGGTAGATGGTGAACCTCCACAACAGATTACTAGT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGCAACTCTGAGAAGTTaGACTTGTGCAGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLATLRS*TCAVSI
Trigger: AATGGACACTGCACAAGTCCAACTTCTCAGAGTTGC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAATTCATCTATGTTGTTTaGATCCCTCCAAACTTCATA +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEFIYVV*IPPNFI
Trigger: TATGAAGTTTGGAGGGATCCAAACAACATAGATGAA...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAAATATACTGTGTAACTaGCAGACAAGGATACAAATG +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYENILCN*QTRIQM
Trigger: CATTTGTATCCTTGTCTGCCAGTTACACAGTATATT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTTACAGGATGGGTCCTaGAATGTGTATATATACATT +
Preference number: 4 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLQDGS*NVYIYI
Trigger: AATGTATATATACACATTCCAGGACCCATCCTGTAA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAATTACAGGATGGGTCCTaGAATGTGTATATATACATT +
Preference number: 4 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYELQDGS*NVYIYI
Trigger: AATGTATATATACACATTCCAGGACCCATCCTGTAA...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTTCTTGCACCAAATTaGTACTTCCTCCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLLAPN*YFLLLF
Trigger: GAAAAGGAGGAGGAAGTACCAATTTGGTGCAAGAAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTAAATCCAAGTGGCCCTaGGAGCTTTTGATTGAGATA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVKSKWP*ELLIEI
Trigger: TATCTCAATCAAAAGCTCCCAGGGCCACTTGGATTT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATGCAGTCAAGAAGGGTaGGCCAACAGCAGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLCSQEG*ANSRGK
Trigger: TTTCCCTCTGCTGTTGGCCCACCCTTCTTGACTGCA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTTGTGATCTATGGGTCACCCATTACAGAAAACATACCACTACTTTCCAAATGTTACCATGTGGAATTGTaGTCTGGAAAGGGCGACTTG +
Preference number: 4 (lower is better)
Translates to: LVIYGSPITENIPLLSKCYHVEL*SGKGDL
Trigger: CAAGTCGCCCTTTCCAGACCACAATTCCACATGGTA...ACATTTGGAAAGTAGTGGTATGTTTTCTGTAATGGGTGACCCATAGATCACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR CAA 72 bp GGAAGAAGGGAAGTATGGAAAGTTTGGGGTACAATGTaGGGATCTGTAGGTGGTATAAAAGGGATGTTTAGA +
Preference number: 4 (lower is better)
Translates to: GRREVWKVWGTM*GSVGGIKGMFR
Trigger: TCTAAACATCCCTTTTATACCACCTACAGATCCCAACATTGTACCCCAAACTTTCCATACTTCCCTTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGAAGTCAAAGTTTCCTaGATTTCCTCTCTGAGAACC +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLEVKVS*ISSLRT
Trigger: GGTTCTCAGAGAGGAAATTCAGGAAACTTTGACTTC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGTAACTGGTGATTCATaGATGTCCATGGGATATGGA +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLVTGDS*MSMGYG
Trigger: TCCATATCCCATGGACATTCATGAATCACCAGTTAC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTATATGCAGAGACTCCTaGTACACAGAATATTCTGCT +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVICRDS*YTEYSA
Trigger: AGCAGAATATTCTGTGTATCAGGAGTCTCTGCATAT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGTCTCTATTTGGTTTTaGCTCTGGTGCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLVSIWF*LWCFSG
Trigger: ACCAGAAAAGCACCAGAGTCAAAACCAAATAGAGAC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTATCTACCTCTTTGTATaGTGTAGAATAGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVIYLFV*CRIVAV
Trigger: CACAGCCACTATTCTACATCATACAAAGAGGTAGAT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTTCCAAGACTAATGGATaGTTTCAAGGTAGGGACTAT +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVSKTNG*FQGRDY
Trigger: ATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGA...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTAACCTATTAGCAGTTTaGCTTCATCTCTTGGGCTAT +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVNLLAV*LHLLGY
Trigger: ATAGCCCAAGAGATGAAGGCAAACTGCTAATAGGTT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGTAAAGAAATCTCCATaGAGGCTGCTGACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLVKKSP*RLLTGP
Trigger: AGGCCCAGTCAGCAGCCTGCATGGAGATTTCTTTAC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTAGAGTCATTTTTCCGTaGAAAGGAGTCCATGAAGTA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVRVIFP*KGVHEV
Trigger: TACTTCATGGACTCCTTTGCACGGAAAAATGACTCT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATCCTCTTTCATCAAGTaGAATCCGTGCACGGGTCAG +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLSSFIK*NPCTGQ
Trigger: CTGACCCGTGCACGGATTGCACTTGATGAAAGAGGA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACAAGGTAGGGACTATTaGTCACGTTATTATCAGGGA +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLQGRDY*SRYYQG
Trigger: TCCCTGATAATAACGTGAGCAATAGTCCCTACCTTG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp TTGGGACAGTACATAACTACAGCTTACAAAACAGGGATGTGGGTTGGTAGGAAGCTATATTATCTCCTCTaGCCCAGATATATCAACCAT +
Preference number: 4 (lower is better)
Translates to: LGQYITTAYKTGMWVGRKLYYLL*PRYINH
Trigger: ATGGTTGATATATCTGGGGCAGAGGAGATAATATAG...CTTCCTACCAACCCACATCCCTGTTTTGTAAGCTGTAGTTATGTACTGTCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTAAACTACCATCTGAATaGCTGCACATGAACTGTTTG +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVKLPSE*LHMNCL
Trigger: CAAACAGTTCATGTGCAGCCATTCAGATGGTAGTTT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACGGAGGACTTGTTTCTaGTTCAGGGGTAATAATATC +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLRRTCF*FRGNNI
Trigger: GATATTATTACCCCTGAACCAGAAACAAGTCCTCCG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACCCTTCTATACTACCTaGTCCAGGAATGTGTTGCGC +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLPFYTT*SRNVLR
Trigger: GCGCAACACATTCCTGGACCAGGTAGTATAGAAGGG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTTGCCTTCATCTCTTGGGCTATCGCTTAAATGTACAACTGGACCTGGATGAGAGAAATGGAAACAAGTaGGAGAATCTAGAAAACAAC +
Preference number: 4 (lower is better)
Translates to: VCLHLLGYRLNVQLDLDERNGNK*ENLENN
Trigger: GTTGTTTTCTAGATTCTCCCACTTGTTTCCATTTCT...CTCATCCAGGTCCAGTTGTACATTTAAGCGATAGCCCAAGAGATGAAGGCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTAAGGTTCCACAAATaGAGTGTATCATCTGAACTT +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLRFHK*SVSSEL
Trigger: AAGTTCAGATGATACACTTCATTTGTGGAACCTTAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp TTTTCTACCAAACGCATTAATACCATCTCTCTTACTTCAAGTCAAGGCACTGAAAGTCAAACTACCATCTaGATGGCTGCACATGAACTG +
Preference number: 4 (lower is better)
Translates to: FSTKRINTISLTSSQGTESQTTI*MAAHEL
Trigger: CAGTTCATGTGCAGCCATTCAGATGGTAGTTTGACT...TTCAGTGCCTTGACTTGAAGTAAGAGAGATGGTATTAATGCGTTTGGTAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATTGCTTTTCCATGCATaGTGGTTAAACTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLLLFHA*WLNLVF
Trigger: GAAGACCAAGTTTAACCATCATGCATGGAAAAGCAA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTTCAGATCAACTACAATaGGATCTTTCTCCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVSDQLQ*DLSPEV
Trigger: TACTTCTGGAGAAAGATCTCATTGTAGTTGATCTGA...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATCTTCAACATCATACTaGAGTCGTACCTCTAATGAC +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLSSTSY*SRTSND
Trigger: GTCATTAGAGGTACGACTTCAGTATGATGTTGAAGA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAAACTATTCCATATGCTaGGCTTACAGCAAGACTAGT +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLNYSIC*AYSKTS
Trigger: ACTAGTCTTGCTGTAAGCTCAGCATATGGAATAGTT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACTGGCTTCTAGCAGTTaGGTAGTGATGCTGGGAATA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLASSS*VVMLGI
Trigger: TATTCCCAGCATCACTACTCAACTGCTAGAAGCCAG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGAAAATGCTTTGAGGTaGCCCAACCCTGCATGGTTT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLENALR*PNPAWF
Trigger: AAACCATGCAGGGTTGGGTCACCTCAAAGCATTTTC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGTCTATAATGATGACTaGGACCAAGATAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLVYNDD*DQDSKQ
Trigger: CTGTTTGCTATCTTGGTCTCAGTCATCATTATAGAC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGTGGCTTATATTATTTaGCCTAGGGACAAAAGCATT +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVVAYII*PRDKSI
Trigger: AATGCTTTTGTCCCTAGGTCAAATAATATAAGCCAC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAAAGTCTGGGGCTCAGTaGAGTGTAAGAAGCAAAGTC +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLKSGAQ*SVRSKV
Trigger: GACTTTGCTTCTTACACTTCACTGAGCCCCAGACTT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAACTTCTGGTATCTTGTaGTGTCACATGTGTAAGACA +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLTSGIL*CHMCKT
Trigger: TGTCTTACACATGTGACATCACAAGATACCAGAAGT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTATGGTTCGCTGTTTTTaGAGGTCTTGTATTCTACTT +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVMVRCF*RSCILL
Trigger: AAGTAGAATACAAGACCTGCAAAAACAGCGAACCAT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCATCTGCAGAGTTATTaGAGAAGCATCCCAAAATTT +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVHLQSY*RSIPKF
Trigger: AAATTTTGGGATGCTTCTGCAATAACTCTGCAGATG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACCACAGCCAACCCATTaGAGTTCCCAAATGCAACTA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLPQPTH*SSQMQL
Trigger: TAGTTGCATTTGGGAACTGCAATGGGTTGGCTGTGG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAAGAGTCATTTTTCCGTaGAAAGGAGTCCATGAAGTA +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLRVIFP*KGVHEV
Trigger: TACTTCATGGACTCCTTTGCACGGAAAAATGACTCT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATGCATGTTTGGAAAATaGTTCTGCACTGGTCATCAT +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLCMFGK*FCTGHH
Trigger: ATGATGACCAGTGCAGAAGCATTTTCCAAACATGCA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTATTCTACATTTCATaGTTTCAGGGCTATGTTGTC +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLFYIS*FQGYVV
Trigger: GACAACATAGCCCTGAAAGCATGAAATGTAGAATAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAAAACTACCATCTGAATaGCTGCACATGAACTGTTTG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLKLPSE*LHMNCL
Trigger: CAAACAGTTCATGTGCAGCCATTCAGATGGTAGTTT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGAATATTCTGCTCTCTaGACACCAGTAAATCATCTG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLEYSAL*TPVNHL
Trigger: CAGATGATTTACTGGTGTCCAGAGAGCAGAATATTC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTATCTATATAGGTCAATaGTCCCCATGCTTAACAGTA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVIYIGQ*SPCLTV
Trigger: TACTGTTAAGCATGGGGACCATTGACCTATATAGAT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACTAGGAGGTTCTTACTaGCATCTAGTAGACAGAGGC +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLGGSY*HLVDRG
Trigger: GCCTCTGTCTACTAGATGCCAGTAAGAACCTCCTAG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTGTGTGAGCCAACATaGTCAAGTTACAATTCTTTT +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLCEPT*SSYNSF
Trigger: AAAAGAATTGTAACTTGACCATGTTGGCTCACACAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATCTTTCACTTCACTGTaGCTCCCATGTCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLSFTSL*LPCPSS
Trigger: TGAGGAAGGACATGGGAGCCACAGTGAAGTGAAAGA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGAAAATAAATCCAAGTaGCCCTGGGAGCTTTTGATT +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLENKSK*PWELLI
Trigger: AATCAAAAGCTCCCAGGGCCACTTGGATTTATTTTC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp TTTTCTACCAAACGCATTAATACCATCTCTCTTACTTCAAGTCAAGGCACTGAATACAAAACAGGGATGTaGGTTGGTAGGAAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: FSTKRINTISLTSSQGTEYKTGM*VGRKKG
Trigger: TCCCTTCTTCCTACCAACCCACATCCCTGTTTTGTA...TTCAGTGCCTTGACTTGAAGTAAGAGAGATGGTATTAATGCGTTTGGTAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461772.5
3UTR CAA 72 bp CATTTTCATAACCTATTAGCAGTTTGCCTTCATCTCTaGGGCTATCGCTTAAATGTACAACTGGACCTGGAT +
Preference number: 4 (lower is better)
Translates to: HFHNLLAVCLHL*GYRLNVQLDLD
Trigger: ATCCAGGTCCAGTTGTACATTTAAGCGATAGCCCAAGAGATGAAGGCAAACTGCTAATAGGTTATGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAAGTCTGAGAAGGCAGTaGGAAGACTTTGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLSLRRQ*EDFGLF
Trigger: AAACAAGCCAAAGTCTTCTCACTGCCTTCTCAGACT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACTGTATGTTAACCGCTaGATTTCAGTAGGAGAGACG +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLYVNR*ISVGET
Trigger: CGTCTCTCCTACTGAAATTCAGCGGTTAACATACAG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGATATACTCCCAGTTTaGCCCAATGATCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLDILPV*PNDPKP
Trigger: TGGCTTAGGATCATTGGGTCAAACTGGGAGTATATC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACTGGGAGCTTTTGATTaGGATAACAATCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLLGAFD*DNNQKG
Trigger: TCCTTTTTGATTGTTATCTCAATCAAAAGCTCCCAG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp CTTGTGATCTATGGGTCACCCATTACAGAAAACATACCACTACTTTCCAAATGTACTACTTTCCAAATGTaGCATGATAACGAACGCTCA +
Preference number: 4 (lower is better)
Translates to: LVIYGSPITENIPLLSKCTTFQM*HDNERS
Trigger: TGAGCGTTCGTTATCATGTCACATTTGGAAAGTAGT...ACATTTGGAAAGTAGTGGTATGTTTTCTGTAATGGGTGACCCATAGATCACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATTCTGGATATGTTTGTaGTCCAAGGTTCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLFWICL*SKVPSS
Trigger: GGAGCTTGGAACCTTGGAGCACAAACATATCCAGAA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACATCTGCAGAGTTATTaGAGAAGCATCCCAAAATTT +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLHLQSY*RSIPKF
Trigger: AAATTTTGGGATGCTTCTGCAATAACTCTGCAGATG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGACGTTTTCCAGAACTaGAACTCTGAGAAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLDVFQN*NSEKLD
Trigger: GTCCAACTTCTCAGAGTTGCAGTTCTGGAAAACGTC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACTCTTGAATTTACTGTaGTACTTCTGGTATCTTGTG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLLLNLL*YFWYLV
Trigger: CACAAGATACCAGAAGTAGCACAGTAAATTCAAGAG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAACTGTCTTGCAAATCTaGAAATACTCCGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLTVLQI*KYSEVK
Trigger: TTTGACTTCGGAGTATTTCCAGATTTGCAAGACAGT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTTGTGATCTATGGGTCACCCATTACAGAAAACATACCACTACTTTCCAAATGTTCATTGATCAAAAATTaGAGCTGTAGGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LVIYGSPITENIPLLSKCSLIKN*SCRTAA
Trigger: TGCAGCTGTCCTACAGCTCCAATTTTTGATCAATGA...ACATTTGGAAAGTAGTGGTATGTTTTCTGTAATGGGTGACCCATAGATCACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAAGCTCCTCCACTGATTaGCCACTCCTTATTACTGTA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLSSSTD*PLLITV
Trigger: TACAGTAATAAGGAGTGGCCAATCAGTGGAGGAGCT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAAGTAAATCATCTGAATaGCAAATGGGTCTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLSKSSE*QMGLPL
Trigger: TAGAGGAAGACCCATTTGCCATTCAGATGATTTACT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACAGTGTCCATTTACATaGTCTGAGGTAGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLQCPFT*SEVGDL
Trigger: CAAGTCTCCTACCTCAGACCATGTAAATGGACACTG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTTTCATCTATGTTGTTTaGATCCCTCCAAACTTCATA +
Preference number: 4 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVFIYVV*IPPNFI
Trigger: TATGAAGTTTGGAGGGATCCAAACAACATAGATGAA...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGTACCTAGCCAAAAATaGAGTTGCATGACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLVPSQK*SCMTED
Trigger: GTCCTCTGTCATGCAACTCCATTTTTGGCTAGGTAC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATTACTGTGCTACTTCTaGTATCTTGTGATGTCACAT +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLLLCYF*YLVMSH
Trigger: ATGTGACATCACAAGATACCAGAAGTAGCACAGTAA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTTGTGATCTATGGGTCACCCATTACAGAAAACATACCACTACTTTCCAAATGTCCGAACTTGCAAATCTaGAAATACTCCGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: LVIYGSPITENIPLLSKCPNLQI*KYSEVK
Trigger: TTTGACTTCGGAGTATTTCCAGATTTGCAAGTTCGG...ACATTTGGAAAGTAGTGGTATGTTTTCTGTAATGGGTGACCCATAGATCACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR GCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATTCAAGTACTGTAATTaGTTTTCCATGCATGATGGT +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLFKYCN*FSMHDG
Trigger: ACCATCATGCATGGAAAAGCAATTACAGTACTTGAA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAAGCTTGTACAGCATCTaGAGAGTTATTGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLSLYSI*RVIAEA
Trigger: TGCTTCTGCAATAACTCTGCAGATGCTGTACAAGCT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGAGAAGTTGGACTTGTaGAGTGTCCATTTACATGGT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLEKLDL*SVHLHG
Trigger: ACCATGTAAATGGACACTGCACAAGTCCAACTTCTC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAAGAGAATATTATGAATaGTTCGCTGTTTTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLREYYE*FAVFAG
Trigger: ACCTGCAAAAACAGCGAACCATTCATAATATTCTCT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAAAAATGCTTCTGCACTaGTCATCATGCCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLKMLLH*SSCLQF
Trigger: AAACTGCAGGCATGATGACCAGTGCAGAAGCATTTT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGTTTTCCGTTTCAGTTaGGTATGGCAAATATATTTG +
Preference number: 4 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLVFRFS*VWQIYL
Trigger: CAAATATATTTGCCATACCCAACTGAAACGGAAAAC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAAACTTGTTGGGACTGTaGTTTGCAAGCCTTATCTTC +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLNLLGL*FASLIF
Trigger: GAAGATAAGGCTTGCAAACCACAGTCCCAACAAGTT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAATATGCAGAGACTCCTaGTACACAGAATATTCTGCT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLICRDS*YTEYSA
Trigger: AGCAGAATATTCTGTGTATCAGGAGTCTCTGCATAT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACTGGTGCTTTTCTGGTaGGTTATAGATACCTTGTAT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLVLFW*VIDTLY
Trigger: ATACAAGGTATCTATAACTCACCAGAAAAGCACCAG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAATCTACCTCTTTGTATaGTGTAGAATAGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLIYLFV*CRIVAV
Trigger: CACAGCCACTATTCTACATCATACAAAGAGGTAGAT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACTAGCTTCTCACAGATaGATAAATGAAAAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLASHR*INEKAH
Trigger: ATGGGCCTTTTCATTTATTCATCTGTGAGAAGCTAG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACTCTCAAAGTCATGGTaGTCCCTTCATGTAGATAAA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLSKSW*SLHVDK
Trigger: TTTATCTACATGAAGGGATCACCATGACTTTGAGAG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACTAAACTTGTTATGTTaGCAACCATGTTCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLNLLC*QPCSLE
Trigger: TTCCAGGGAACATGGTTGTCAACATAACAAGTTTAG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAACCACCACATTTGCTTaGAGTATAAAAGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLTTTFA*SIKDVS
Trigger: GGAGACATCTTTTATACTGCAAGCAAATGTGGTGGT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATGCATGTTTGGAAAATaGTTCTGCACTGGTCATCAT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLCMFGK*FCTGHH
Trigger: ATGATGACCAGTGCAGAAGCATTTTCCAAACATGCA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATCATTGATCAAAAATTaGAGCTGTAGGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLSLIKN*SCRTAA
Trigger: TGCAGCTGTCCTACAGCTCCAATTTTTGATCAATGA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATTGACTTTTTCCATGTaGAATTGTGGTCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLTFSM*NCGLER
Trigger: CCTTTCCAGACCACAATTCCACATGGAAAAAGTCAA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATCTGTTTTGAGCTTCTaGTGTCTCTATGGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLSVLSF*CLYGSK
Trigger: TTTACTCCCATAGAGACACCAGAAGCTCAAAACAGA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGAAAATAAATCCAAGTaGCCCTGGGAGCTTTTGATT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLENKSK*PWELLI
Trigger: AATCAAAAGCTCCCAGGGCCACTTGGATTTATTTTC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACTAAGGTTCCACAAATaGAGTGTATCATCTGAACTT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLRFHK*SVSSEL
Trigger: AAGTTCAGATGATACACTTCATTTGTGGAACCTTAG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAATCCCAAAATTTTATTaGTCCATCTGCATGACCAGT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLIPKFY*SICMTS
Trigger: ACTGGTCATGCAGATGGATCAATAAAATTTTGGGAT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR TCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAAAGGTTCTAGTACAATaGAAGTTACAGATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLKVLVQ*KLQMRR
Trigger: TCTCCTCATCTGTAACTTTCATTGTACTAGAACCTT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAATACACAGAATATTCTaGTCTCTGGACACCAGTAAA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLIHRIF*SLDTSK
Trigger: TTTACTGGTGTCCAGAGAGCAGAATATTCTGTGTAT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATTGAATAACAAGTTCTaGTTGATATCCTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLNNKF*LISWRH
Trigger: ATGCCTCCAGGATATCAAGCAGAACTTGTTATTCAA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACCTCATGTCTGTCAGTaGCAAATAATTAACATCCAA +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLPHVCQ*QIINIQ
Trigger: TTGGATGTTAATTATTTGCCACTGACAGACATGAGG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACTGTGTGAGCCAACATaGTCAAGTTACAATTCTTTT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLCEPT*SSYNSF
Trigger: AAAAGAATTGTAACTTGACCATGTTGGCTCACACAG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CCA 90 bp CTTCATAACTTACTGGAATCAAATGGCAGAAATGGAAACAAGTGGGAGAATCTACCATTATCCAATTTTTaGTTGGGACAGTACATAACT +
Preference number: 4 (lower is better)
Translates to: LHNLLESNGRNGNKWENLPLSNF*LGQYIT
Trigger: AGTTATGTACTGTCCCAACCAAAAATTGGATAATGG...TAGATTCTCCCACTTGTTTCCATTTCTGCCATTTGATTCCAGTAAGTTATGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR CCA 90 bp TTTTCTACCAAACGCATTAATACCATCTCTCTTACTTCAAGTCAAGGCACTGAAGTCTTCATAACTTACTaGAATCAAATGGCAGAAATG +
Preference number: 4 (lower is better)
Translates to: FSTKRINTISLTSSQGTEVFITY*NQMAEM
Trigger: CATTTCTGCCATTTGATTCCAGTAAGTTATGAAGAC...TTCAGTGCCTTGACTTGAAGTAAGAGAGATGGTATTAATGCGTTTGGTAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGTAATTGCTTTTCCATaGATGATGGTTAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLVIAFP*MMVKLG
Trigger: ACCAAGTTTAACCATCATGCATGGAAAAGCAATTAC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR GCA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATTCAAGTACTGTAATTaGTTTTCCATGCATGATGGT +
Preference number: 4 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLFKYCN*FSMHDG
Trigger: ACCATCATGCATGGAAAAGCAATTACAGTACTTGAA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS CCA 90 bp CGGGAAGCTGAGGGGGCCGAGGTAGGCGGGCTCCGGCCGCTTCTCTaGGCCCTCTGGTCGCGGCGCCTGGCGCTCTCCGAGGTCCTAACC +
Preference number: 5 (lower is better)
Translates to: REAEGAEVGGLRPLL*ALWSRRLALSEVLT
Trigger: GGTTAGGACCTCGGAGAGCGCCAGGCGCCGCGACCAGAGGGCCCAGAGAAGCGGCCGGAGCCCGCCTACCTCGGCCCCCTCAGCTTCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS CCA 90 bp GAGGGGGCCGAGGTAGGCGGGCTCCGGCCGCTTCTCTGGGCCCTCTaGTCGCGGCGCCTGGCGCTCTCCGAGGTCCTAACCGAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: EGAEVGGLRPLLWAL*SRRLALSEVLTEQS
Trigger: TGACTGCTCGGTTAGGACCTCGGAGAGCGCCAGGCGCCGCGACCAGAGGGCCCAGAGAAGCGGCCGGAGCCCGCCTACCTCGGCCCCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273666.10
CDS GCA 90 bp CCGCCGGATGTACGGAACCACTTCCAGCCCCACCACCACTGTTACTaGCACTGCTGCTACCACTGCCAGGGGAGGAGGCAGTTAAGCCAT +
Preference number: 5 (lower is better)
Translates to: PPDVRNHFQPHHHCY*HCCYHCQGRRQLSH
Trigger: ATGGCTTAACTGCCTCCTCCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACAGTGGTGGTGGGGCTGGAAGTGGTTCCGTACATCCGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273666.10
ENST00000461772.5
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000495504.5
ENST00000497029.5
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGGGCCGGCCCCTAGCTaGCCCCGCCCTGCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLGPAPS*PRPASS
Trigger: GGAAGAAGCAGGGCGGGGCAAGCTAGGGGCCGGCCC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000273666.10
CDS GCA 90 bp GATGTACGGAACCACTTCCAGCCCCACCACCACTGTTACTGCCACTaGTGCTACCACTGCCAGGGGAGGAGGCAGTTAAGCCATCCAAAA +
Preference number: 5 (lower is better)
Translates to: DVRNHFQPHHHCYCH*CYHCQGRRQLSHPK
Trigger: TTTTGGATGGCTTAACTGCCTCCTCCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACAGTGGTGGTGGGGCTGGAAGTGGTTCCGTACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273666.10
ENST00000461772.5
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000495504.5
ENST00000497029.5
CDS CCA 90 bp TCCCATCACCCCTCCAGCAGCGCCTTTCATCCCTTCTATACTACCTaGTCCAGGAATGTGTTGCGCAAGGCTGCGGGATGCTTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SHHPSSSAFHPFYTT*SRNVLRKAAGCFSC
Trigger: GCAGGAAAAGCATCCCGCAGCCTTGCGCAACACATTCCTGGACCAGGTAGTATAGAAGGGATGAAAGGCGCTGCTGGAGGGGTGATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
CDS GCA 90 bp GCAGCGCCTTTCATCCCTTCTATACTACCTGGTCCAGGAATGTGTTaGGCAAGGCTGCGGGATGCTTTTCCTGCCGAAGCTTCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: AAPFIPSILPGPGMC*ARLRDAFPAEASPK
Trigger: CTTTGGGGAAGCTTCGGCAGGAAAAGCATCCCGCAGCCTTGCGCAACACATTCCTGGACCAGGTAGTATAGAAGGGATGAAAGGCGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAATGGTCCAGGAATGTGTaGCGCAAGGCTGCGGGATGC +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEWSRNV*RKAAGC
Trigger: GCATCCCGCAGCCTTGCGCAACACATTCCTGGACCA...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS GCA 90 bp TTCTATACTACCTGGTCCAGGAATGTGTTGCGCAAGGCTGCGGGATaGTTTTCCTGCCGAAGCTTCCCCAAAGAGCTCTTCTCTGTCAAA +
Preference number: 5 (lower is better)
Translates to: FYTTWSRNVLRKAAG*FSCRSFPKELFSVK
Trigger: TTTGACAGAGAAGAGCTCTTTGGGGAAGCTTCGGCAGGAAAAGCATCCCGCAGCCTTGCGCAACACATTCCTGGACCAGGTAGTATAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGGCCGTGTCTTCACATaGAGGCATGGAATACTGTCC +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLGRVFT*RHGILS
Trigger: GGACAGTATTCCATGCCTCAATGTGAAGACACGGCC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAATCTGAGGTAGGAGACTaGCAGCGCTCAAGTTCTAGG +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYESEVGD*QRSSSR
Trigger: CCTAGAACTTGAGCGCTGCAAGTCTCCTACCTCAGA...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTTGGTCCAGGAATGTGTaGCGCAAGGCTGCGGGATGC +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVWSRNV*RKAAGC
Trigger: GCATCCCGCAGCCTTGCGCAACACATTCCTGGACCA...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGCTCCAGCCTTTGGGTaGCACAGTGTCTCTGATACA +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLAPAFG*HSVSDT
Trigger: TGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS CCA 90 bp TCTTCTGTTGTAACTGGTAAAGAAATCTCCATGCAGGCTGCTGACTaGGCCTTTCGAAATGGTGGTCTTCCAGGACCCCAGCGATTTACT +
Preference number: 5 (lower is better)
Translates to: SSVVTGKEISMQAAD*AFRNGGLPGPQRFT
Trigger: AGTAAATCGCTGGGGTCCTGGAAGACCACCATTTCGAAAGGCCCAGTCAGCAGCCTGCATGGAGATTTCTTTACCAGTTACAACAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273666.10
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAAAGAGCACCTTTCGATaGCAGACCCTACTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEKSTFR*QTLLGL
Trigger: CAAACCCAGTAGGGTCTGCAATCGAAAGGTGCTCTT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGGAGACAAGGTCAACTaGTTGGGACTGTGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEGDKVN*LGLWFA
Trigger: TGCAAACCACAGTCCCAACAAGTTGACCTTGTCTCC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACCATGCCGAACTGTCTaGCAAATCTGGAAATACTCC +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEPCRTV*QIWKYS
Trigger: GGAGTATTTCCAGATTTGCAAGACAGTTCGGCATGG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp ACCAGGTCTCCCGAGTATTCGTATAGCACCTGTTCTCGTCCCAATAGCCAAGATACCAAGGCACCCTCATaGATCAAAAATTGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: TRSPEYSYSTCSRPNSQDTKAPS*IKNWSC
Trigger: ACAGCTCCAATTTTTGATCAATGAGGGTGCCTTGGT...ATCTTGGCTATTGGGACGAGAACAGGTGCTATACGAATACTCGGGAGACCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAATGCAACTCTGAGAAGTaGGACTTGTGCAGTGTCCAT +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYECNSEK*DLCSVH
Trigger: ATGGACACTGCACAAGTCCAACTTCTCAGAGTTGCA...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACTCACCACGATCTTCTaGCACCAAATTGGTACTTCC +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYELTTIF*HQIGTS
Trigger: GGAAGTACCAATTTGGTGCAAGAAGATCGTGGTGAG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp ACCAGGTCTCCCGAGTATTCGTATAGCACCTGTTCTCGTCCCAATAGCCAAGATGTTTGGGGTACAATGTaGGGATCTGTAGGTGGTATA +
Preference number: 5 (lower is better)
Translates to: TRSPEYSYSTCSRPNSQDVWGTM*GSVGGI
Trigger: TATACCACCTACAGATCCCAACATTGTACCCCAAAC...ATCTTGGCTATTGGGACGAGAACAGGTGCTATACGAATACTCGGGAGACCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS TCA 90 bp GTTTGTCCGCTTCCACCAAACAGTCCCTTGAGAAAGCCTCTGTTTTaGGCTTCTGGTGTCTCTATGGGAGTAAACAAATCTCCTAGCATG +
Preference number: 5 (lower is better)
Translates to: VCPLPPNSPLRKPLF*ASGVSMGVNKSPSM
Trigger: CATGCTAGGAGATTTGTTTACTCCCATAGAGACACCAGAAGCTCAAAACAGAGGCTTTCTCAAGGGACTGTTTGGTGGAAGCGGACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAATGCACCACTTTCATGTaGGCAATAGCAATCAACACC +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYECTTFM*AIAINT
Trigger: GGTGTTGATTGCTATTGCCAACATGAAAGTGGTGCA...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGGCCGTGTCTTCACATaGAGGCATGGAATACTGTCC +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVGRVFT*RHGILS
Trigger: GGACAGTATTCCATGCCTCAATGTGAAGACACGGCC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGAGAAAGCCTCTGTTTaGAGCTTCTGGTGTCTCTAT +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLEKASV*SFWCLY
Trigger: ATAGAGACACCAGAAGCTCAAAACAGAGGCTTTCTC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTTCTCTGTCAAATGTTaGTCCGCTTCCACCAAACAG +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLFSVKC*SASTKQ
Trigger: CTGTTTGGTGGAAGCGGACAAACATTTGACAGAGAA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTGTTGGGACTGTGGTTaGCAAGCCTTATCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLCWDCG*QALSSD
Trigger: ATCAGAAGATAAGGCTTGCAAACCACAGTCCCAACA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGCTTTCAGGGCTATGTaGTCTGCAAATACACACACT +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLAFRAM*SANTHT
Trigger: AGTGTGTGTATTTGCAGACAACATAGCCCTGAAAGC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAACTATATCTTACATCTaGCCTTCCCTGACCACTCAG +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYETISYI*PSLTTQ
Trigger: CTGAGTGGTCAGGGAAGGCAAGATGTAAGATATAGT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTATGTGTTACTGCCTTaGATAGGCTGGACTCTCCTT +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLYVLLP*IGWTLL
Trigger: AAGGAGAGTCCAGCCTATCAAAGGCAGTAACACATA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GCACCCTCATTGATCAAAAATTGGAGCTGTAGGACAGCTGCACCACTTTCATGTTGCACCACTTTCATGTaGGCAATAGCAATCAACACC +
Preference number: 5 (lower is better)
Translates to: APSLIKNWSCRTAAPLSCCTTFM*AIAINT
Trigger: GGTGTTGATTGCTATTGCCAACATGAAAGTGGTGCA...ACATGAAAGTGGTGCAGCTGTCCTACAGCTCCAATTTTTGATCAATGAGGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGTTTGCCTTCATCTCTaGGGCTATCGCTTAAATGTA +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEVCLHL*GYRLNV
Trigger: TACATTTAAGCGATAGCCCAAGAGATGAAGGCAAAC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAAATTTCTGGATATGTTaGTGCTCCAAGGTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYENFWIC*CSKVPS
Trigger: GCTTGGAACCTTGGAGCACAAACATATCCAGAAATT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGGCATCTGCAGAGTTATaGCAGAAGCATCCCAAAATT +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLASAEL*QKHPKI
Trigger: AATTTTGGGATGCTTCTGCAATAACTCTGCAGATGC...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATCCCAGAAAGACTCCTaGAAGAAGGAAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLSQKDS*KKEAGL
Trigger: CAGCCCAGCTTCCTTCTTCAAGGAGTCTTTCTGGGA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAAAGACTAGTAATCTGTaGTGGAGGTTCACCATCTAC +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEKTSNL*WRFTIY
Trigger: GTAGATGGTGAACCTCCACAACAGATTACTAGTCTT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGAAGACTAGTAATCTGTaGTGGAGGTTCACCATCTAC +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLKTSNL*WRFTIY
Trigger: GTAGATGGTGAACCTCCACAACAGATTACTAGTCTT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTACCACAGCCAACCCATaGCAGTTCCCAAATGCAACT +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVTTANP*QFPNAT
Trigger: AGTTGCATTTGGGAACTGCAATGGGTTGGCTGTGGT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATCTGAGGTAGGAGACTaGCAGCGCTCAAGTTCTAGG +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLSEVGD*QRSSSR
Trigger: CCTAGAACTTGAGCGCTGCAAGTCTCCTACCTCAGA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAAACTCATGTGCATGTTaGGAAAATGCTTCTGCACTG +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYENSCAC*ENASAL
Trigger: CAGTGCAGAAGCATTTTCCAAACATGCACATGAGTT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTAAGAGCACCTTTCGATaGCAGACCCTACTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVKSTFR*QTLLGL
Trigger: CAAACCCAGTAGGGTCTGCAATCGAAAGGTGCTCTT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGAAGAGAATGACCAGTTaGGTTTGTGAATGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLKRMTS*VCECQA
Trigger: AGCCTGACATTCACAAACCAAACTGGTCATTCTCTT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAAGTAGGTGTCTCTATTaGGTTTTGACTCTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYESRCLY*VLTLVL
Trigger: AAGCACCAGAGTCAAAACCAAATAGAGACACCTACT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGGAGACAAGGTCAACTaGTTGGGACTGTGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVGDKVN*LGLWFA
Trigger: TGCAAACCACAGTCCCAACAAGTTGACCTTGTCTCC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAAGATCCCTAGAAACTTaGAGGGAAAGGAGTTGGATT +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYERSLET*RERSWI
Trigger: AATCCAACTCCTTTCCCTCAAAGTTTCTAGGGATCT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGTCTTCTTGCACCAAATaGGTACTTCCTCCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLSSCTK*VLPPPF
Trigger: AAAAGGAGGAGGAAGTACCAATTTGGTGCAAGAAGA...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGAATGGTTCGCTGTTTTaGCAGGTCTTGTATTCTACT +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLNGSLF*QVLYST
Trigger: AGTAGAATACAAGACCTGCAAAAACAGCGAACCATT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAACATCCCAAAATTTTATaGATCCATCTGCATGACCAG +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEHPKIL*IHLHDQ
Trigger: CTGGTCATGCAGATGGATCAATAAAATTTTGGGATG...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAATCTACCCACACCAATaGAATAACAAGTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEIYPHQ*NNKFCL
Trigger: CAAGCAGAACTTGTTATTCAATTGGTGTGGGTAGAT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGATCTACCCACACCAATaGAATAACAAGTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLIYPHQ*NNKFCL
Trigger: CAAGCAGAACTTGTTATTCAATTGGTGTGGGTAGAT...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCAGAGGCCAGGGATGTaGCTAACATCCTACAATACA +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVQRPGM*LTSYNT
Trigger: TGTATTGTAGGATGTTAGCAACATCCCTGGCCTCTG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAACTAAACTTGTTATGTaGACAACCATGTTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYETKLVM*TTMFPG
Trigger: TCCAGGGAACATGGTTGTCAACATAACAAGTTTAGT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTCACCACGATCTTCTaGCACCAAATTGGTACTTCC +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLTTIF*HQIGTS
Trigger: GGAAGTACCAATTTGGTGCAAGAAGATCGTGGTGAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS TCA 90 bp TTTGAAACATCGGCACTAGAAAGACGTTTTCCAGAACTGCAACTCTaGGAAGTTGGACTTGTGCAGTGTCCATTTACATGGTCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: FETSALERRFPELQL*EVGLVQCPFTWSEV
Trigger: TACCTCAGACCATGTAAATGGACACTGCACAAGTCCAACTTCTCAGAGTTGCAGTTCTGGAAAACGTCTTTCTAGTGCCGATGTTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273666.10
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAGTTCTTGAAATTCATTaGGATAGGGCGTTTCACATA +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEVLEIH*DRAFHI
Trigger: TATGTGAAACGCCCTATCCAAATGAATTTCAAGAAC...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAATTTCATCTATGTTGTTaGGATCCCTCCAAACTTCAT +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEFHLCC*DPSKLH
Trigger: ATGAAGTTTGGAGGGATCCAAACAACATAGATGAAA...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGGCAGTGAGAAGACTTaGGCTTGTTTTTCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLGSEKT*ACFSEQ
Trigger: CTGCTCAGAAAAACAAGCCAAAGTCTTCTCACTGCC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAATGCTGGGAATAAATTaGGTTTCCCTGAATATGGTT +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEMLGIN*VSLNMV
Trigger: AACCATATTCAGGGAAACCAAATTTATTCCCAGCAT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCAGGGCTCCAGCCTTTGGGTTGCACAGTGTCTCTGATACATCTCTTTTATGAAATAAGGGACAAGTGTTaGGCATCTATTGACATAATC +
Preference number: 5 (lower is better)
Translates to: PGLQPLGCTVSLIHLFYEIRDKC*ASIDII
Trigger: GATTATGTCAATAGATGCCAAACACTTGTCCCTTAT...TTCATAAAAGAGATGTATCAGAGACACTGTGCAACCCAAAGGCTGGAGCCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp AGGCAAATTCAGCCGTATTTTGGGATTTTAACCAGGGCTCCAGCCTTTGGGTTGCTAATAGTGCTGCTTTaGAGAAATCTCGATGTAGAT +
Preference number: 5 (lower is better)
Translates to: RQIQPYFGILTRAPAFGLLIVLL*RNLDVD
Trigger: ATCTACATCGAGATTTCTCAAAAGCAGCACTATTAG...CAACCCAAAGGCTGGAGCCCTGGTTAAAATCCCAAAATACGGCTGAATTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACAGAGGCCAGGGATGTaGCTAACATCCTACAATACA +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLQRPGM*LTSYNT
Trigger: TGTATTGTAGGATGTTAGCAACATCCCTGGCCTCTG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTTGTTGGGACTGTGGTTaGCAAGCCTTATCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVCWDCG*QALSSD
Trigger: ATCAGAAGATAAGGCTTGCAAACCACAGTCCCAACA...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTTTGACTTCTTTTGCATaGCCCTGTGTGAGCCAACAT +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLTSFA*PCVSQH
Trigger: ATGTTGGCTCACACAGGGCAATGCAAAAGAAGTCAA...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTACTATATCTTACATCTaGCCTTCCCTGACCACTCAG +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVTISYI*PSLTTQ
Trigger: CTGAGTGGTCAGGGAAGGCAAGATGTAAGATATAGT...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS GCA 90 bp TTTTCATCTATGTTGTTTGGATCCCTCCAAACTTCATATGGCGGTTaGATTAATCCACCCATTCGGTCCATACAGGAGAATGTTAGCACA +
Preference number: 5 (lower is better)
Translates to: FSSMLFGSLQTSYGG*INPPIRSIQENVST
Trigger: TGTGCTAACATTCTCCTGTATGGACCGAATGGGTGGATTAATGCAACCGCCATATGAAGTTTGGAGGGATCCAAACAACATAGATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000497029.5
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGTTTGCCTTCATCTCTaGGGCTATCGCTTAAATGTA +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVVCLHL*GYRLNV
Trigger: TACATTTAAGCGATAGCCCAAGAGATGAAGGCAAAC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTGCATCTGCAGAGTTATaGCAGAAGCATCCCAAAATT +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVASAEL*QKHPKI
Trigger: AATTTTGGGATGCTTCTGCAATAACTCTGCAGATGC...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATCCCAGAAAGACTCCTaGAAGAAGGAAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLSQKDS*KKEAGL
Trigger: CAGCCCAGCTTCCTTCTTCAAGGAGTCTTTCTGGGA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGAGAAAGCCTCTGTTTaGAGCTTCTGGTGTCTCTAT +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLEKASV*SFWCLY
Trigger: ATAGAGACACCAGAAGCTCAAAACAGAGGCTTTCTC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCAGACCCTACTGGGTTaGAACAGTAATATACTGTGT +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVQTLLG*NSNILC
Trigger: ACACAGTATATTACTGTTCAAACCCAGTAGGGTCTG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATTGACTTCTTTTGCATaGCCCTGTGTGAGCCAACAT +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLLTSFA*PCVSQH
Trigger: ATGTTGGCTCACACAGGGCAATGCAAAAGAAGTCAA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTTGGCCCTGGGAGCTTTaGATTGAGATAACAATCAAA +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVWPWEL*IEITIK
Trigger: TTTGATTGTTATCTCAATCAAAAGCTCCCAGGGCCA...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTTCATAACTTACTGGAATCAAATGGCAGAAATGGAAACAAGTGGGAGAATCTATCTTACCATGTGGAATaGTGGTCTGGAAAGGGCGAC +
Preference number: 5 (lower is better)
Translates to: LHNLLESNGRNGNKWENLSYHVE*WSGKGD
Trigger: GTCGCCCTTTCCAGACCACAATTCCACATGGTAAGA...TAGATTCTCCCACTTGTTTCCATTTCTGCCATTTGATTCCAGTAAGTTATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR CAA 90 bp CTGCCCCAGATATATCAACCATCCATTATCCAATTTTTGGTTGGGACAGTACATGGAAGTATGGAAAGTTaGGGGTACAATGTTGGGATC +
Preference number: 5 (lower is better)
Translates to: LPQIYQPSIIQFLVGTVHGSMES*GYNVGI
Trigger: GATCCCAACATTGTACCCCAAACTTTCCATACTTCC...ATGTACTGTCCCAACCAAAAATTGGATAATGGATGGTTGATATATCTGGGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGACAGCATAGGGTTCTaGAAATTCATTTGGATAGGG +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLDSIGF*KFIWIG
Trigger: CCCTATCCAAATGAATTTCAAGAACCCTATGCTGTC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAAATAACAAGTTCTGCTaGATATCCTGGAGGCATTCG +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLNNKFC*ISWRHS
Trigger: CGAATGCCTCCAGGATATCAAGCAGAACTTGTTATT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATCTGAGAAGTTGGACTaGTGCAGTGTCCATTTACAT +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLSEKLD*CSVHLH
Trigger: ATGTAAATGGACACTGCACAAGTCCAACTTCTCAGA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTACAGACCCTACTGGGTTaGAACAGTAATATACTGTGT +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLQTLLG*NSNILC
Trigger: ACACAGTATATTACTGTTCAAACCCAGTAGGGTCTG...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAAAGAGAATGACCAGTTaGGTTTGTGAATGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLKRMTS*VCECQA
Trigger: AGCCTGACATTCACAAACCAAACTGGTCATTCTCTT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAGAACTGGGAGAAATTTaGGCAATGACTGGAGACATT +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLELGEI*AMTGDI
Trigger: AATGTCTCCAGTCATTGCCAAAATTTCTCCCAGTTC...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAAGATCCCTAGAAACTTaGAGGGAAAGGAGTTGGATT +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLRSLET*RERSWI
Trigger: AATCCAACTCCTTTCCCTCAAAGTTTCTAGGGATCT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCCTGATATGAATGTTTaGACTTCTTTTGCATTGCCC +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVPDMNV*TSFALP
Trigger: GGGCAATGCAAAAGAAGTCAAAACATTCATATCAGG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATGGCCCTGGGAGCTTTaGATTGAGATAACAATCAAA +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLWPWEL*IEITIK
Trigger: TTTGATTGTTATCTCAATCAAAAGCTCCCAGGGCCA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTGCCCCAGATATATCAACCATCCATTATCCAATTTTTGGTTGGGACAGTACATAAAACCATGCCGAACTaGCAAATCTGGAAATACTCC +
Preference number: 5 (lower is better)
Translates to: LPQIYQPSIIQFLVGTVHKTMPN*QIWKYS
Trigger: GGAGTATTTCCAGATTTGCAAGTTCGGCATGGTTTT...ATGTACTGTCCCAACCAAAAATTGGATAATGGATGGTTGATATATCTGGGGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACCATGCCGAACTGTCTaGCAAATCTGGAAATACTCC +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLPCRTV*QIWKYS
Trigger: GGAGTATTTCCAGATTTGCAAGACAGTTCGGCATGG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTTGTGATCTATGGGTCACCCATTACAGAAAACATACCACTACTTTCCAAATGTTATGGCTGGCCTTTTTaGTCTAAGGTTCCACAAATG +
Preference number: 5 (lower is better)
Translates to: LVIYGSPITENIPLLSKCYGWPF*SKVPQM
Trigger: CATTTGTGGAACCTTAGACAAAAAAGGCCAGCCATA...ACATTTGGAAAGTAGTGGTATGTTTTCTGTAATGGGTGACCCATAGATCACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR CAA 90 bp CTTGTGATCTATGGGTCACCCATTACAGAAAACATACCACTACTTTCCAAATGTGTTTGCCTTCATCTCTaGGGCTATCGCTTAAATGTA +
Preference number: 5 (lower is better)
Translates to: LVIYGSPITENIPLLSKCVCLHL*GYRLNV
Trigger: TACATTTAAGCGATAGCCCAAGAGATGAAGGCAAAC...ACATTTGGAAAGTAGTGGTATGTTTTCTGTAATGGGTGACCCATAGATCACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAAATGGTTCGCTGTTTTaGCAGGTCTTGTATTCTACT +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLNGSLF*QVLYST
Trigger: AGTAGAATACAAGACCTGCAAAAACAGCGAACCATT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTTTTGAAGTTTTTAGCTaGTACAGCATCTGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVFEVFS*YSICRV
Trigger: AACTCTGCAGATGCTGTACAAGCTAAAAACTTCAAA...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATGCAACTCTGAGAAGTaGGACTTGTGCAGTGTCCAT +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLCNSEK*DLCSVH
Trigger: ATGGACACTGCACAAGTCCAACTTCTCAGAGTTGCA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGGCAGTGAGAAGACTTaGGCTTGTTTTTCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLGSEKT*ACFSEQ
Trigger: CTGCTCAGAAAAACAAGCCAAAGTCTTCTCACTGCC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTCCAAACTCCAAGACTAATGGATGATTTCAAGGTAGGGACTATTGCTCACGTTCTCTTTCACTCATCTTaGTTCTCCTCAAAATTACTG +
Preference number: 5 (lower is better)
Translates to: LQTPRLMDDFKVGTIAHVLFHSS*FSSKLL
Trigger: CAGTAATTTTGAGGAGAACAAAGATGAGTGAAAGAG...AACGTGAGCAATAGTCCCTACCTTGAAATCATCCATTAGTCTTGGAGTTTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTAATGACTGGAGACATTTaGATTGTCATTACTAGGAGG +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLMTGDI*IVITRR
Trigger: CCTCCTAGTAATGACAATCAAAATGTCTCCAGTCAT...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAACCAAGGCACCCTCATaGATCAAAAATTGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLTKAPS*IKNWSC
Trigger: ACAGCTCCAATTTTTGATCAATGAGGGTGCCTTGGT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACCACGCATGCAAAAGTaGTCTGCAATGAACTGTTTG +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLPRMQK*SAMNCL
Trigger: CAAACAGTTCATTGCAGACAACTTTTGCATGCGTGG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273666.10
CDS-3UTR CAA 90 bp CCTCCTTTTCTAAGACAGACCTTACCTATTCTACATTTCATGCTTTCAGGGCTATCATTTTCATCTATGTaGTTTGGATCCCTCCAAACT +
Preference number: 5 (lower is better)
Translates to: PPFLRQTLPILHFMLSGLSFSSM*FGSLQT
Trigger: AGTTTGGAGGGATCCAAACAACATAGATGAAAATGA...TAGCCCTGAAAGCATGAAATGTAGAATAGGTAAGGTCTGTCTTAGAAAAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATTCTCTGTCAAATGTTaGTCCGCTTCCACCAAACAG +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLFSVKC*SASTKQ
Trigger: CTGTTTGGTGGAAGCGGACAAACATTTGACAGAGAA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGCTTTCAGGGCTATGTaGTCTGCAAATACACACACT +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLAFRAM*SANTHT
Trigger: AGTGTGTGTATTTGCAGACAACATAGCCCTGAAAGC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS TCA 90 bp GATTTTCAAAGATTGGAAAATTGCTTTGTGTCAGATCAACTACAATaGGATCTTTCTCCAGAAGTACCACGACAGCATAGGGTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: DFQRLENCFVSDQLQ*DLSPEVPRQHRVLE
Trigger: TTCAAGAACCCTATGCTGTCGTGGTACTTCTGGAGAAAGATCTCATTGTAGTTGATCTGACACAAAGCAATTTTCCAATCTTTGAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000497029.5
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATATGGCTGGCCTTTTTaGTCTAAGGTTCCACAAATG +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLYGWPF*SKVPQM
Trigger: CATTTGTGGAACCTTAGACAAAAAAGGCCAGCCATA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGACAGCATAGGGTTCTaGAAATTCATTTGGATAGGG +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLDSIGF*KFIWIG
Trigger: CCCTATCCAAATGAATTTCAAGAACCCTATGCTGTC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATCTTCTTGCACCAAATaGGTACTTCCTCCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLSSCTK*VLPPPF
Trigger: AAAAGGAGGAGGAAGTACCAATTTGGTGCAAGAAGA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTACATCCCAAAATTTTATaGATCCATCTGCATGACCAG +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLHPKIL*IHLHDQ
Trigger: CTGGTCATGCAGATGGATCAATAAAATTTTGGGATG...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp CTTCATAACTTACTGGAATCAAATGGCAGAAATGGAAACAAGTGGGAGAATCTATCCATTATCCAATTTTaGGTTGGGACAGTACATAAC +
Preference number: 5 (lower is better)
Translates to: LHNLLESNGRNGNKWENLSIIQF*VGTVHN
Trigger: GTTATGTACTGTCCCAACCAAAAATTGGATAATGGA...TAGATTCTCCCACTTGTTTCCATTTCTGCCATTTGATTCCAGTAAGTTATGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461772.5
CDS CCA 90 bp AATATGGTTTCTCAAAGCAGTCACAGCTTCTTTAGAAGTCAGAATTaGTACCATTTCTTATCCTTGTATTTCAGCATTAACTCATGTGCA +
Preference number: 5 (lower is better)
Translates to: NMVSQSSHSFFRSQN*YHFLSLYFSINSCA
Trigger: TGCACATGAGTTAATGCTGAAATACAAGGATAAGAAATGGTACCAATTCTGACTTCTAAAGAAGCTGTGACTGCTTTGAGAAACCATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAGTTCTTGAAATTCATTaGGATAGGGCGTTTCACATA +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLVLEIH*DRAFHI
Trigger: TATGTGAAACGCCCTATCCAAATGAATTTCAAGAAC...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATTTCATCTATGTTGTTaGGATCCCTCCAAACTTCAT +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLFHLCC*DPSKLH
Trigger: ATGAAGTTTGGAGGGATCCAAACAACATAGATGAAA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATCATTTTCATCTATGTaGTTTGGATCCCTCCAAACT +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLSFSSM*FGSLQT
Trigger: AGTTTGGAGGGATCCAAACAACATAGATGAAAATGA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTAATGCTGGGAATAAATTaGGTTTCCCTGAATATGGTT +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLMLGIN*VSLNMV
Trigger: AACCATATTCAGGGAAACCAAATTTATTCCCAGCAT...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS-3UTR CAA 90 bp GTTATTAGAGATTCTGTTCCTGTGTACAATTGTCCAAAACCACCATCTAGTTTATTGAGTGTGGCCCAATaGATAGAAATAGTTTACCAT +
Preference number: 5 (lower is better)
Translates to: VIRDSVPVYNCPKPPSSLLSVAQ*IEIVYH
Trigger: ATGGTAAACTATTTCTATCAATTGGGCCACACTCAA...TAAACTAGATGGTGGTTTTGGACAATTGTACACAGGAACAGAATCTCTAATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS CCA 72 bp GAGGGGGCCGAGGTAGGCGGGCTCCGGCCGCTTCTCTaGGCCCTCTGGTCGCGGCGCCTGGCGCTCTCCGAG +
Preference number: 6 (lower is better)
Translates to: EGAEVGGLRPLL*ALWSRRLALSE
Trigger: CTCGGAGAGCGCCAGGCGCCGCGACCAGAGGGCCCAGAGAAGCGGCCGGAGCCCGCCTACCTCGGCCCCCTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS CCA 72 bp GAGGTAGGCGGGCTCCGGCCGCTTCTCTGGGCCCTCTaGTCGCGGCGCCTGGCGCTCTCCGAGGTCCTAACC +
Preference number: 6 (lower is better)
Translates to: EVGGLRPLLWAL*SRRLALSEVLT
Trigger: GGTTAGGACCTCGGAGAGCGCCAGGCGCCGCGACCAGAGGGCCCAGAGAAGCGGCCGGAGCCCGCCTACCTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273666.10
ENST00000471454.6
CDS GCA 72 bp GTACGGAACCACTTCCAGCCCCACCACCACTGTTACTaGCACTGCTGCTACCACTGCCAGGGGAGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: VRNHFQPHHHCY*HCCYHCQGRRQ
Trigger: CTGCCTCCTCCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACAGTGGTGGTGGGGCTGGAAGTGGTTCCGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273666.10
ENST00000461772.5
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000495504.5
ENST00000497029.5
CDS GCA 72 bp AACCACTTCCAGCCCCACCACCACTGTTACTGCCACTaGTGCTACCACTGCCAGGGGAGGAGGCAGTTAAGC +
Preference number: 6 (lower is better)
Translates to: NHFQPHHHCYCH*CYHCQGRRQLS
Trigger: GCTTAACTGCCTCCTCCCCTGGCAGTGGTAGCAGCAGTGGCAGTAACAGTGGTGGTGGGGCTGGAAGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273666.10
ENST00000461772.5
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000495504.5
ENST00000497029.5
CDS CCA 72 bp CCCTCCAGCAGCGCCTTTCATCCCTTCTATACTACCTaGTCCAGGAATGTGTTGCGCAAGGCTGCGGGATGC +
Preference number: 6 (lower is better)
Translates to: PSSSAFHPFYTT*SRNVLRKAAGC
Trigger: GCATCCCGCAGCCTTGCGCAACACATTCCTGGACCAGGTAGTATAGAAGGGATGAAAGGCGCTGCTGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
CDS GCA 72 bp ACCTGGTCCAGGAATGTGTTGCGCAAGGCTGCGGGATaGTTTTCCTGCCGAAGCTTCCCCAAAGAGCTCTTC +
Preference number: 6 (lower is better)
Translates to: TWSRNVLRKAAG*FSCRSFPKELF
Trigger: GAAGAGCTCTTTGGGGAAGCTTCGGCAGGAAAAGCATCCCGCAGCCTTGCGCAACACATTCCTGGACCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
CDS CAA 90 bp AGCAGCGCCTTTCATCCCTTCTATACTACCTGGTCCAGGAATGTGTaGCGCAAGGCTGCGGGATGCTTTTCCTGCCGAAGCTTCCCCAAA +
Preference number: 6 (lower is better)
Translates to: SSAFHPFYTTWSRNV*RKAAGCFSCRSFPK
Trigger: TTTGGGGAAGCTTCGGCAGGAAAAGCATCCCGCAGCCTTGCGCAACACATTCCTGGACCAGGTAGTATAGAAGGGATGAAAGGCGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
CDS CCA 72 bp GTAACTGGTAAAGAAATCTCCATGCAGGCTGCTGACTaGGCCTTTCGAAATGGTGGTCTTCCAGGACCCCAG +
Preference number: 6 (lower is better)
Translates to: VTGKEISMQAAD*AFRNGGLPGPQ
Trigger: CTGGGGTCCTGGAAGACCACCATTTCGAAAGGCCCAGTCAGCAGCCTGCATGGAGATTTCTTTACCAGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273666.10
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
CDS CAA 72 bp TTTCATCCCTTCTATACTACCTGGTCCAGGAATGTGTaGCGCAAGGCTGCGGGATGCTTTTCCTGCCGAAGC +
Preference number: 6 (lower is better)
Translates to: FHPFYTTWSRNV*RKAAGCFSCRS
Trigger: GCTTCGGCAGGAAAAGCATCCCGCAGCCTTGCGCAACACATTCCTGGACCAGGTAGTATAGAAGGGATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
CDS CCA 72 bp AACAAGTTCTGCTTGATATCCTGGAGGCATTCGCACTaGCCGTGTCTTCACATTGAGGCATGGAATACTGTC +
Preference number: 6 (lower is better)
Translates to: NKFCLISWRHSH*PCLHIEAWNTV
Trigger: GACAGTATTCCATGCCTCAATGTGAAGACACGGCCAGTGCGAATGCCTCCAGGATATCAAGCAGAACTTGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000497029.5
CDS TCA 72 bp TCGGCACTAGAAAGACGTTTTCCAGAACTGCAACTCTaGGAAGTTGGACTTGTGCAGTGTCCATTTACATGG +
Preference number: 6 (lower is better)
Translates to: SALERRFPELQL*EVGLVQCPFTW
Trigger: CCATGTAAATGGACACTGCACAAGTCCAACTTCTCAGAGTTGCAGTTCTGGAAAACGTCTTTCTAGTGCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273666.10
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
CDS CAA 90 bp AAGACTAGTAATCTGTTGTGGAGGTTCACCATCTACCCACACCAATaGAATAACAAGTTCTGCTTGATATCCTGGAGGCATTCGCACTGG +
Preference number: 6 (lower is better)
Translates to: KTSNLLWRFTIYPHQ*NNKFCLISWRHSHW
Trigger: CCAGTGCGAATGCCTCCAGGATATCAAGCAGAACTTGTTATTCAATTGGTGTGGGTAGATGGTGAACCTCCACAACAGATTACTAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000497029.5
CDS TCA 72 bp CTTCCACCAAACAGTCCCTTGAGAAAGCCTCTGTTTTaGGCTTCTGGTGTCTCTATGGGAGTAAACAAATCT +
Preference number: 6 (lower is better)
Translates to: LPPNSPLRKPLF*ASGVSMGVNKS
Trigger: AGATTTGTTTACTCCCATAGAGACACCAGAAGCTCAAAACAGAGGCTTTCTCAAGGGACTGTTTGGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
CDS GCA 72 bp ATGTTGTTTGGATCCCTCCAAACTTCATATGGCGGTTaGATTAATCCACCCATTCGGTCCATACAGGAGAAT +
Preference number: 6 (lower is better)
Translates to: MLFGSLQTSYGG*INPPIRSIQEN
Trigger: ATTCTCCTGTATGGACCGAATGGGTGGATTAATGCAACCGCCATATGAAGTTTGGAGGGATCCAAACAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000497029.5
CDS CCA 72 bp TTAACTCATGTGCATGTTTGGAAAATGCTTCTGCACTaGTCATCATGCCTGCAGTTTTCTCTTCCAGCTCTC +
Preference number: 6 (lower is better)
Translates to: LTHVHVWKMLLH*SSCLQFSLPAL
Trigger: GAGAGCTGGAAGAGAAAACTGCAGGCATGATGACCAGTGCAGAAGCATTTTCCAAACATGCACATGAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
CDS TCA 72 bp ACCTTTGTTCATCTGCTAATGGTAGGTTTAAGGAGATaGTTAACACCATTCCCAGACTGGTTCCAACGAACA +
Preference number: 6 (lower is better)
Translates to: TFVHLLMVGLRR*LTPFPDWFQRT
Trigger: TGTTCGTTGGAACCAGTCTGGGAATGGTGTTAATCATCTCCTTAAACCTACCATTAGCAGATGAACAAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000497029.5
CDS CAA 72 bp ATCTGCATGACCAGTAATAATAATTTCTGGATATGTTaGTGCTCCAAGGTTCCAAGCTCCTCCACTGATTGG +
Preference number: 6 (lower is better)
Translates to: ICMTSNNNFWIC*CSKVPSSSTDW
Trigger: CCAATCAGTGGAGGAGCTTGGAACCTTGGAGCACAAACATATCCAGAAATTATTATTACTGGTCATGCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000497029.5
CDS TCA 72 bp AGATTGGAAAATTGCTTTGTGTCAGATCAACTACAATaGGATCTTTCTCCAGAAGTACCACGACAGCATAGG +
Preference number: 6 (lower is better)
Translates to: RLENCFVSDQLQ*DLSPEVPRQHR
Trigger: CCTATGCTGTCGTGGTACTTCTGGAGAAAGATCTCATTGTAGTTGATCTGACACAAAGCAATTTTCCAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000497029.5
CDS TCA 72 bp TCTGCAAAGTATGCTGTGCATGTAACTGGTGATTCATaGATGTCCATGGGATATGGATTTTCAAAGATTGGA +
Preference number: 6 (lower is better)
Translates to: SAKYAVHVTGDS*MSMGYGFSKIG
Trigger: TCCAATCTTTGAAAATCCATATCCCATGGACATTCATGAATCACCAGTTACATGCACAGCATACTTTGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000497029.5
CDS CCA 72 bp CATAAAGGCAAGTCTGAGAAGGCAGTGAGAAGACTTTaGCTTGTTTTTCTGAGCAGATTATTGTATACTGAT +
Preference number: 6 (lower is better)
Translates to: HKGKSEKAVRRL*LVFLSRLLYTD
Trigger: ATCAGTATACAATAATCTGCTCAGAAAAACAAGCCAAAGTCTTCTCACTGCCTTCTCAGACTTGCCTTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000497029.5
CDS TCA 72 bp ATACTGATGATCTCCTATTTCTTGGGATGCAGAAGATaGGTTCATTACCACTTTCCTTCTCCAAGATTTTTC +
Preference number: 6 (lower is better)
Translates to: ILMISYFLGCRR*VHYHFPSPRFF
Trigger: GAAAAATCTTGGAGAAGGAAAGTGGTAATGAACTCATCTTCTGCATCCCAAGAAATAGGAGATCATCAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000497029.5
CDS TCA 72 bp TCTGGTTCAGGGGTAATAATATCTTCAACATCATACTaGAGTCGTACCTCTAATGACACTATTTCTGTTGTA +
Preference number: 6 (lower is better)
Translates to: SGSGVIISSTSY*SRTSNDTISVV
Trigger: TACAACAGAAATAGTGTCATTAGAGGTACGACTTCAGTATGATGTTGAAGATATTATTACCCCTGAACCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273666.10
ENST00000471262.1
ENST00000471454.6
ENST00000472879.5
ENST00000492541.5
ENST00000497029.5