RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STXBP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000166263

Ensembl transcript IDs: ENST00000376352.6, ENST00000398391.6, ENST00000405898.5, ENST00000434978.6, ENST00000461444.5, ENST00000463234.1, ENST00000464340.5, ENST00000468837.1

Found 616 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTaGGCCGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGA +
Preference number: 1 (lower is better)
Translates to: AEAGEWREPGKRSLQ*AEIAPLQSAVPPGR
Trigger: TCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 90 bp GGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTaGAGTGAGCCGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTG +
Preference number: 1 (lower is better)
Translates to: GRLRQENGVNPGSGA*SEPRLRRCSPQSRL
Trigger: CAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 90 bp ACAGCTGTGGAGCCAGCTGCATCAACACAATCACAGTGTCCTGCGTaGTGGGCTGTGACCTCCCTCCGTGGAGACAGCAGGGTATGGGGG +
Preference number: 1 (lower is better)
Translates to: TAVEPAASTQSQCPA*WAVTSLRGDSRVWG
Trigger: CCCCCATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR TCA 90 bp CAGCAGGTAACTAGAACTCAGCTCAGTCCTTGTGTAGGTGCAGGGTaGCCTACCTGTCCTGGCTTGCCCAGAGCTGAGGGAGTTCCCAGG +
Preference number: 1 (lower is better)
Translates to: QQVTRTQLSPCVGAG*PTCPGLPRAEGVPR
Trigger: CCTGGGAACTCCCTCAGCTCTGGGCAAGCCAGGACAGGTAGGTCACCCTGCACCTACACAAGGACTGAGCTGAGTTCTAGTTACCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 90 bp ATGCACAGCTGTGGAGCCAGCTGCATCAACACAATCACAGTGTCCTaGGTGATGGGCTGTGACCTCCCTCCGTGGAGACAGCAGGGTATG +
Preference number: 1 (lower is better)
Translates to: MHSCGASCINTITVS*VMGCDLPPWRQQGM
Trigger: CATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR CCA 90 bp AACACAATCACAGTGTCCTGCGTGATGGGCTGTGACCTCCCTCCGTaGAGACAGCAGGGTATGGGGGAAGGGGGACTGCTCATGGAATCA +
Preference number: 1 (lower is better)
Translates to: NTITVSCVMGCDLPP*RQQGMGEGGLLMES
Trigger: TGATTCCATGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR GCA 90 bp AGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTaGATCAACACAATCACAGTGTCCTGCGTGATGGGCTGTGACCTC +
Preference number: 1 (lower is better)
Translates to: RCLLNLCGMHSCGAS*INTITVSCVMGCDL
Trigger: GAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR TCA 90 bp AGGCCAGCAACTCTCTTGAGGTGGAAGTTCTTGCTCTACCACTCCTaGGTGGGAAGTGGGGTTGGGCAGGTGTGTAAAAATGCAGGCATG +
Preference number: 1 (lower is better)
Translates to: RPATLLRWKFLLYHS*VGSGVGQVCKNAGM
Trigger: CATGCCTGCATTTTTACACACCTGCCCAACCCCACTTCCCACTCAGGAGTGGTAGAGCAAGAACTTCCACCTCAAGAGAGTTGCTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 90 bp CACCTCTTTGTTGGACGGCTGTCCTCAGGCTACAGGAACATGCTTTaGCTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACCC +
Preference number: 1 (lower is better)
Translates to: HLFVGRLSSGYRNML*LHCRLEAPGNLHPP
Trigger: GGGTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCCTGTAGCCTGAGGACAGCCGTCCAACAAAGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 90 bp TTGTGTAGGTGCAGGGTGACCTACCTGTCCTGGCTTGCCCAGAGCTaGGGGAGTTCCCAGGATTTGGGACCTTCAGTTTACAAATCAGGA +
Preference number: 1 (lower is better)
Translates to: LCRCRVTYLSWLAQS*GSSQDLGPSVYKSG
Trigger: TCCTGATTTGTAAACTGAAGGTCCCAAATCCTGGGAACTCCCTCAGCTCTGGGCAAGCCAGGACAGGTAGGTCACCCTGCACCTACACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 90 bp GCTTCTGGTGAGGGCTTGCTCTCTGCTTCAAAGATGGCAACTTCTTaGTGCATCCTCACAAGGCAGAAGGGGCAAACAGGTTCCCTGAAG +
Preference number: 1 (lower is better)
Translates to: ASGEGLLSASKMATS*CILTRQKGQTGSLK
Trigger: CTTCAGGGAACCTGTTTGCCCCTTCTGCCTTGTGAGGATGCAGCAAGAAGTTGCCATCTTTGAAGCAGAGAGCAAGCCCTCACCAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 90 bp TCTTTGTTGGACGGCTGTCCTCAGGCTACAGGAACATGCTTTGACTaGATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACCCCCAC +
Preference number: 1 (lower is better)
Translates to: SLLDGCPQATGTCFD*IAGWKHLEIYTHPH
Trigger: GTGGGGGTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCCTGTAGCCTGAGGACAGCCGTCCAACAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 90 bp TTGACCGAAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTaGAGCCAGCTGCATCAACACAATCACAGTGTCCTGCGTGATGGG +
Preference number: 1 (lower is better)
Translates to: LTEEVPSESLWNAQL*SQLHQHNHSVLRDG
Trigger: CCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTTCGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR GCA 90 bp AGGGGGACTGCTCATGGAATCAGAAGACTTAGGAGTGAGTCTCGGTaGTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTAC +
Preference number: 1 (lower is better)
Translates to: RGTAHGIRRLRSESR*WDRELPLSELLFPY
Trigger: GTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR GCA 90 bp ACCTGCACCTCTTTGTTGGACGGCTGTCCTCAGGCTACAGGAACATaGTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACC +
Preference number: 1 (lower is better)
Translates to: TCTSLLDGCPQATGT*FDCIAGWKHLEIYT
Trigger: GGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCCTGTAGCCTGAGGACAGCCGTCCAACAAAGAGGTGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 90 bp CAGGTGTGTAAAAATGCAGGCATGGCATCCATAGAGTGCCAGCTCTaGGCATGGGGAAGGCAGCATGTGTCAAGGAGCTCTTCAAAGAAG +
Preference number: 1 (lower is better)
Translates to: QVCKNAGMASIECQL*AWGRQHVSRSSSKK
Trigger: CTTCTTTGAAGAGCTCCTTGACACATGCTGCCTTCCCCATGCCCAGAGCTGGCACTCTATGGATGCCATGCCTGCATTTTTACACACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 90 bp ATAGAGGGGCCATGTTTGACCGAAGAGGTGCCTTCTGAATCTCTGTaGAATGCACAGCTGTGGAGCCAGCTGCATCAACACAATCACAGT +
Preference number: 1 (lower is better)
Translates to: IEGPCLTEEVPSESL*NAQLWSQLHQHNHS
Trigger: ACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR GCA 90 bp TGGTTCTTAGACTATGTTCTAAGGACCTCTAGGTCTGCACAGCAGTaGTGGGAGCTGCTCGACTTGGGCTTTAGGCTTCCATCTTGTTTC +
Preference number: 1 (lower is better)
Translates to: WFLDYVLRTSRSAQQ*WELLDLGFRLPSCF
Trigger: GAAACAAGATGGAAGCCTAAAGCCCAAGTCGAGCAGCTCCCAGCACTGCTGTGCAGACCTAGAGGTCCTTAGAACATAGTCTAAGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 90 bp TTCTTAGACTATGTTCTAAGGACCTCTAGGTCTGCACAGCAGTGCTaGGAGCTGCTCGACTTGGGCTTTAGGCTTCCATCTTGTTTCGAG +
Preference number: 1 (lower is better)
Translates to: FLDYVLRTSRSAQQC*ELLDLGFRLPSCFE
Trigger: CTCGAAACAAGATGGAAGCCTAAAGCCCAAGTCGAGCAGCTCCCAGCACTGCTGTGCAGACCTAGAGGTCCTTAGAACATAGTCTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 90 bp CTCTTATGGCACCGACCTGATGGTTTAGAAGTCACGGAAGCTTTATaGAGAGGGAATCTGAGAGAGTGGCCAACTGGTTCAGTCCATTCA +
Preference number: 1 (lower is better)
Translates to: LLWHRPDGLEVTEAL*RGNLREWPTGSVHS
Trigger: TGAATGGACTGAACCAGTTGGCCACTCTCTCAGATTCCCTCTTCATAAAGCTTCCGTGACTTCTAAACCATCAGGTCGGTGCCATAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 90 bp TGTGATCCTTTTGGGTTCACAGAAATCAATCTAATCCTCCAATGTTaGCCACATTGGGCTGGAGGAAGCTCACTGGCGTTGTCCAAGGTC +
Preference number: 1 (lower is better)
Translates to: CDPFGFTEINLILQC*PHWAGGSSLALSKV
Trigger: GACCTTGGACAACGCCAGTGAGCTTCCTCCAGCCCAATGTGGTCAACATTGGAGGATTAGATTGATTTCTGTGAACCCAAAAGGATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 90 bp GCTACCAAGAGCCTCTTAATATACCAGACCTGGTCATCGCCCACATaGGCTTGCACCTTTAAGATGGTGCCACTTGGAAGTTTGTTCTTA +
Preference number: 1 (lower is better)
Translates to: ATKSLLIYQTWSSPT*ACTFKMVPLGSLFL
Trigger: TAAGAACAAACTTCCAAGTGGCACCATCTTAAAGGTGCAAGCCCATGTGGGCGATGACCAGGTCTGGTATATTAAGAGGCTCTTGGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 90 bp AAGAGCCTCTTAATATACCAGACCTGGTCATCGCCCACATGGGCTTaGACCTTTAAGATGGTGCCACTTGGAAGTTTGTTCTTACTACTA +
Preference number: 1 (lower is better)
Translates to: KSLLIYQTWSSPTWA*TFKMVPLGSLFLLL
Trigger: TAGTAGTAAGAACAAACTTCCAAGTGGCACCATCTTAAAGGTGCAAGCCCATGTGGGCGATGACCAGGTCTGGTATATTAAGAGGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 90 bp GAAAAGATCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTaGTCCTTTTGGGTTCACAGAAATCAATCTAATCCTCCAATGTTG +
Preference number: 1 (lower is better)
Translates to: EKILIQVQQVLLLLL*SFWVHRNQSNPPML
Trigger: CAACATTGGAGGATTAGATTGATTTCTGTGAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGATCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 90 bp AGGACTTCTGATCTCAATAGGGCAATAACTCACATCTACAAAGAATaGCCAACAGTGGGACCAGTCACTCAGGGTAATGACACTATAATT +
Preference number: 1 (lower is better)
Translates to: RTSDLNRAITHIYKE*PTVGPVTQGNDTII
Trigger: AATTATAGTGTCATTACCCTGAGTGACTGGTCCCACTGTTGGTCATTCTTTGTAGATGTGAGTTATTGCCCTATTGAGATCAGAAGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 90 bp TGGATTGAATGGAAAAGATCCTCATTCAGGTCCAGCAGGTGTTATTaGTACTCCTGTGATCCTTTTGGGTTCACAGAAATCAATCTAATC +
Preference number: 1 (lower is better)
Translates to: WIEWKRSSFRSSRCY*YSCDPFGFTEINLI
Trigger: GATTAGATTGATTTCTGTGAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGATCTTTTCCATTCAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 90 bp AAGGTTTGTTTGAAATTGGCAAGGAGCAAGGTACATGAGGGAGTTTaGATTGTCCACAGCCTTAAAGGTTCACTTCACACAGTAAATACT +
Preference number: 1 (lower is better)
Translates to: KVCLKLARSKVHEGV*IVHSLKGSLHTVNT
Trigger: AGTATTTACTGTGTGAAGTGAACCTTTAAGGCTGTGGACAATGCAAACTCCCTCATGTACCTTGCTCCTTGCCAATTTCAAACAAACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 90 bp CCTTTGAGTAAAATCACTCACCACAGTATTAGTGACTGCTACCTCTaGAAAGTGAGACAGGCTATCTCTTACTTTATTCACTTCCAAAGT +
Preference number: 1 (lower is better)
Translates to: PLSKITHHSISDCYL*KVRQAISYFIHFQS
Trigger: ACTTTGGAAGTGAATAAAGTAAGAGATAGCCTGTCTCACTTTCCAGAGGTAGCAGTCACTAATACTGTGGTGAGTGATTTTACTCAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 90 bp GTAAAATCACTCACCACAGTATTAGTGACTGCTACCTCTGGAAAGTaGGACAGGCTATCTCTTACTTTATTCACTTCCAAAGTACTTGAT +
Preference number: 1 (lower is better)
Translates to: VKSLTTVLVTATSGK*DRLSLTLFTSKVLD
Trigger: ATCAAGTACTTTGGAAGTGAATAAAGTAAGAGATAGCCTGTCTCACTTTCCAGAGGTAGCAGTCACTAATACTGTGGTGAGTGATTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATaGTTTACTCCTATTTTAGACTGTTTCATCTCAGAATTGGATGTT +
Preference number: 1 (lower is better)
Translates to: TQSPESPFHTSTSSA*FTPILDCFISELDV
Trigger: AACATCCAATTCTGAGATGAAACAGTCTAAAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR GCA 90 bp AGAGGAACTTACAAATTCACCTCAATTCTAGGATTTTGTGCTTCTTaGAAAGACTATTCAGAGGCACACCTGATGTTTTGTGGTAGAGTT +
Preference number: 1 (lower is better)
Translates to: RGTYKFTSILGFCAS*KDYSEAHLMFCGRV
Trigger: AACTCTACCACAAAACATCAGGTGTGCCTCTGAATAGTCTTTGCAAGAAGCACAAAATCCTAGAATTGAGGTGAATTTGTAAGTTCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 90 bp CACATCTGTGACAACTCTAGCATTTCTAGCAGGAAAAACAAATCCTaGAAAAGCATCAAATGCAGTGAATCTGACCACACAATGGTAAAA +
Preference number: 1 (lower is better)
Translates to: HICDNSSISSRKNKS*KSIKCSESDHTMVK
Trigger: TTTTACCATTGTGTGGTCAGATTCACTGCATTTGATGCTTTTTCAGGATTTGTTTTTCCTGCTAGAAATGCTAGAGTTGTCACAGATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 90 bp CAAGTAAGGAATTCAGATTGCTGGGATAGTGTTTCCATTTTCTCCTaGGGAATTCTTTTCTTATCAGCTCTAATTACTAGAAAGTTCCTT +
Preference number: 1 (lower is better)
Translates to: QVRNSDCWDSVSIFS*GILFLSALITRKFL
Trigger: AAGGAACTTTCTAGTAATTAGAGCTGATAAGAAAAGAATTCCCCAGGAGAAAATGGAAACACTATCCCAGCAATCTGAATTCCTTACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 90 bp TTTGGTTTCAGGCTTTATCTACCCTTCTATACCAAAATCATTCTGTaGTATTTCTTCAGAACCTTGGGCAAATCAACAATGTGTGAGTAT +
Preference number: 1 (lower is better)
Translates to: FGFRLYLPFYTKIIL*YFFRTLGKSTMCEY
Trigger: ATACTCACACATTGTTGATTTGCCCAAGGTTCTGAAGAAATACCACAGAATGATTTTGGTATAGAAGGGTAGATAAAGCCTGAAACCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp CGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCACAGAACTATTGATCTaGTCGCCCTTTCCCTCAGAA +
Preference number: 2 (lower is better)
Translates to: RDCAAAVRSPAWATERDSTELLI*SPFPSE
Trigger: TTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGT...GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATAGGAGACAGCAGGGTATaGGGGAAGGGGGACTGCTCA +
Preference number: 2 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIGDSRV*GKGDCS
Trigger: TGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCC...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR CAA 90 bp TGTTGGACGGCTGTCCTCAGGCTACAGGAACATGCTTTGACTGCATaGCAGGCTGGAAGCACCTGGAAATTTACACCCACCCCCACCCCC +
Preference number: 2 (lower is better)
Translates to: CWTAVLRLQEHALTA*QAGSTWKFTPTPTP
Trigger: GGGGGTGGGGGTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCCTGTAGCCTGAGGACAGCCGTCCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp CGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCAGGAATTCAGATTGCTaGGATAGTGTTTCCATTTTC +
Preference number: 2 (lower is better)
Translates to: RDCAAAVRSPAWATERDSRNSDC*DSVSIF
Trigger: GAAAATGGAAACACTATCCCAGCAATCTGAATTCCT...GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGTCTGCACAGCAGTGCTaGGAGCTGCTCGACTTGGGC +
Preference number: 2 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLSAQQC*ELLDLG
Trigger: GCCCAAGTCGAGCAGCTCCCAGCACTGCTGTGCAGA...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACTCACAGTGTCCTGCGTaGTGGGCTGTGACCTCCCTC +
Preference number: 2 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHSQCPA*WAVTSL
Trigger: GAGGGAGGTCACAGCCCATCACGCAGGACACTGTGA...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTCGAAGAGGTGCCTTCTaGATCTCTGTGGAATGCACA +
Preference number: 2 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVRRGAF*ISVECT
Trigger: TGTGCATTCCACAGAGATTCAGAAGGCACCTCTTCG...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR-3UTR GCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTAGCTGTGGAGCCAGCTaGATCAACACAATCACAGTG +
Preference number: 2 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVSCGAS*INTITV
Trigger: CACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCT...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR-3UTR CCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCAGTGAGTCTCGGTGCTaGGACAGAGAGCTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: KRCLLNLCGMHSCGASCISESRC*DRELPL
Trigger: GAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACT...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR CAA 90 bp GCACCTCTTTGTTGGACGGCTGTCCTCAGGCTACAGGAACATGCTTaGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACC +
Preference number: 2 (lower is better)
Translates to: APLCWTAVLRLQEHA*TALQAGSTWKFTPT
Trigger: GGTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCCTGTAGCCTGAGGACAGCCGTCCAACAAAGAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR GCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGAGGAGTGAGTCTCGGTaGTGGGACAGAGAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLRSESR*WDRELP
Trigger: AGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCT...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTGTCCGCAGTCCCGCCTaGGCGACAGAGCGAGACTCC +
Preference number: 2 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLVRSPA*ATERDS
Trigger: GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGAC...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATAAGAGCTTCCTCTCTCTaGACTGCTATTTCCCTACTG +
Preference number: 2 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIRASSL*TAISLL
Trigger: CAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCT...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR-3UTR GCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTGATGTTATGCGTCTCTaGTCACATCATCCATGTAGC +
Preference number: 2 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVDVMRL*SHHPCS
Trigger: GCTACATGGATGATGTGAGCAGAGACGCATAACATC...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR-3UTR GCA 90 bp AATGGAATGGGGGACAGAACTATTGATCTGATCGCCCTTTCCCTCAGAACAGTCTGGCGAAGGCTTGGGTaGAGAGAAGGGGGAAGGGTT +
Preference number: 2 (lower is better)
Translates to: NGMGDRTIDLIALSLRTVWRRLG*REGGRV
Trigger: AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCA...GACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGCTCAAACCATCCCTCTaGGAAGGGCAACCTAAGCAG +
Preference number: 2 (lower is better)
Translates to: TTVTENRAVIARSWGGEGLKPSL*EGQPKQ
Trigger: CTGCTTAGGTTGCCCTTCCCAGAGGGATGGTTTGAG...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGTGGCCTAGGCTTCAATaGGGAGGTATTCCCTGGTCA +
Preference number: 2 (lower is better)
Translates to: TTVTENRAVIARSWGGEGWPRLQ*GGIPWS
Trigger: TGACCAGGGAATACCTCCCCATTGAAGCCTAGGCCA...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTCTGCGTGATGGGCTGTaGCCTCCCTCCGTGGAGACA +
Preference number: 2 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLLRDGL*PPSVET
Trigger: TGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAG...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACGGGGGACAGAACTATTaGTCTGATCGCCCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHGGQNY*SDRPFP
Trigger: AGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCC...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACGGGAGCTGCTCGACTTaGGCTTTAGGCTTCCATCTT +
Preference number: 2 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHGSCST*ALGFHL
Trigger: AAGATGGAAGCCTAAAGCCCAAGTCGAGCAGCTCCC...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 90 bp TTTTGGGTTCACAGAAATCAATCTAATCCTCCAATGTTGACCACATaGGGCTGGAGGAAGCTCACTGGCGTTGTCCAAGGTCCCACTGCC +
Preference number: 2 (lower is better)
Translates to: FWVHRNQSNPPMLTT*GWRKLTGVVQGPTA
Trigger: GGCAGTGGGACCTTGGACAACGCCAGTGAGCTTCCTCCAGCCCAATGTGGTCAACATTGGAGGATTAGATTGATTTCTGTGAACCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACGGGTTCTCTGGCCTCTaGCTTGAACCTACTGTAGAA +
Preference number: 2 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHGFSGL*LEPTVE
Trigger: TTCTACAGTAGGTTCAAGTCAGAGGCCAGAGAACCC...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTGTTTCATCTCAGAATTaGATGTTATGCGTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVVSSQN*MLCVSA
Trigger: AGCAGAGACGCATAACATCCAATTCTGAGATGAAAC...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR-3UTR CCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGTGGGGACAGGTGTGGTaGAGAAGGAAGAAGCTATAT +
Preference number: 2 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLWGQVW*RRKKLY
Trigger: ATATAGCTTCTTCCTTCTCCACCACACCTGTCCCCA...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGATCTTGATGAGCTATTaGCCAGGGGTGCTTTGGAAG +
Preference number: 2 (lower is better)
Translates to: TTVTENRAVIARSWGGEGILMSY*PGVLWK
Trigger: CTTCCAAAGCACCCCTGGCCAATAGCTCATCAAGAT...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCCCTTCTGAATCTCTGTaGAATGCACAGCTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFPSESL*NAQLWS
Trigger: GCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGG...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 90 bp ACCTGCATTCCAGGACAGGCTATGGCAGTGAACCTTGGCTACACATaGAAATCACCTAGAATCCTTAAAACACAGGTGCCAGGGTCCTAT +
Preference number: 2 (lower is better)
Translates to: TCIPGQAMAVNLGYT*KSPRILKTQVPGSY
Trigger: ATAGGACCCTGGCACCTGTGTTTTAAGGATTCTAGGTGATTTCAATGTGTAGCCAAGGTTCACTGCCATAGCCTGTCCTGGAATGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGTTAGCACAGTGCTTGTaGCATTGTTGGTGCTCAATA +
Preference number: 2 (lower is better)
Translates to: TTVTENRAVIARSWGGEGLAQCL*HCWCSI
Trigger: TATTGAGCACCAACAATGTCACAAGCACTGTGCTAA...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR GCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCCAATATCACAAAGAGTaGGCCTACTTGGCGAAGGCT +
Preference number: 2 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFQYHKE*AYLAKA
Trigger: AGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTG...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR GCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGCACAGTATTAGTGACTaGTACCTCTGGAAAGTGAGA +
Preference number: 2 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLHSISD*YLWKVR
Trigger: TCTCACTTTCCAGAGGTAGCAGTCACTAATACTGTG...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGGGGTCGTATTTGCACTaGAAAAGGATTCTTGCTAAG +
Preference number: 2 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLGSYLH*KRILAK
Trigger: CTTAGCAAGAATCCTTTTCCAGTGCAAATACGACCC...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACACTGCGATCATACTGTaGGTTTTATGGCCCAACTTA +
Preference number: 2 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHTAIIL*VLWPNL
Trigger: TAAGTTGGGCCATAAAACTCACAGTATGATCGCAGT...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR GCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATATCAACAAGTAGTGCATaGTTTACTCCTATTTTAGAC +
Preference number: 2 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFISTSSA*FTPILD
Trigger: GTCTAAAATAGGAGTAAAGCATGCACTACTTGTTGA...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR-3UTR GCA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGTATGAGGGTCGTATTTaGACTGGAAAAGGATTCTTG +
Preference number: 2 (lower is better)
Translates to: TTVTENRAVIARSWGGEGYEGRI*TGKGFL
Trigger: CAAGAATCCTTTTCCAGTGCAAATACGACCCTCATA...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR GCA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGGTCTTTGCCTGTGCATaGATGAATTTGGTTGTTCTT +
Preference number: 2 (lower is better)
Translates to: TTVTENRAVIARSWGGEGVFACA*MNLVVL
Trigger: AAGAACAACCAAATTCATGCATGCACAGGCAAAGAC...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR GCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGCTCCAGAATAGGCTTTaGTTGACATCACACTTTTTG +
Preference number: 2 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLLQNRL*LTSHFL
Trigger: CAAAAAGTGTGATGTCAAGCAAAGCCTATTCTGGAG...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGGCTCATCACCATGTATaGCACAAAATGCCCAATAAA +
Preference number: 2 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLAHHHV*HKMPNK
Trigger: TTTATTGGGCATTTTGTGCCATACATGGTGATGAGC...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 90 bp TCGCCCACATGGGCTTGCACCTTTAAGATGGTGCCACTTGGAAGTTaGTTCTTACTACTAACCCAGATGAGTCAAACCTTACCTACAGTT +
Preference number: 2 (lower is better)
Translates to: SPTWACTFKMVPLGS*FLLLTQMSQTLPTV
Trigger: AACTGTAGGTAAGGTTTGACTCATCTGGGTTAGTAGTAAGAACAAACTTCCAAGTGGCACCATCTTAAAGGTGCAAGCCCATGTGGGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGCGAATTGATTTCCATTaGGAGAACATGTGGATTGAA +
Preference number: 2 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLRIDFH*ENMWIE
Trigger: TTCAATCCACATGTTCTCTCAATGGAAATCAATTCG...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR GCA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGCAGAATTGGATGTTATaGGTCTCTGCTCACATCATC +
Preference number: 2 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWQNWML*VSAHII
Trigger: GATGATGTGAGCAGAGACGCATAACATCCAATTCTG...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR-3UTR CCA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGCTGAAACATTTCTCATaGCTAATGACTACCTATCAG +
Preference number: 2 (lower is better)
Translates to: TTVTENRAVIARSWGGEGLKHFS*LMTTYQ
Trigger: CTGATAGGTAGTCATTAGCCATGAGAAATGTTTCAG...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACAGCTCATTTGAAAGTTaGTCCTCGCAACCATTACAT +
Preference number: 2 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHSSFES*SSQPLH
Trigger: ATGTAATGGTTGCGAGGACCAACTTTCAAATGAGCT...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp AGGTCCAGGATCTTTGACAATGGCAAGATAAAGACGGTAAACTTAGATGTCCTGACAGCAGTTAATGGATaGGGTGTCTCTTGTCAGTGG +
Preference number: 2 (lower is better)
Translates to: RSRIFDNGKIKTVNLDVLTAVNG*GVSCQW
Trigger: CCACTGACAAGAGACACCTCATCCATTAACTGCTGT...CAGGACATCTAAGTTTACCGTCTTTATCTTGCCATTGTCAAAGATCCTGGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACAGAAAACAGTATATCTaGGCAACTGTTGGTGATAAG +
Preference number: 2 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHRKQYI*ATVGDK
Trigger: CTTATCACCAACAGTTGCTCAGATATACTGTTTTCT...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR GCA 90 bp TCCAAAGGAGGACAGTTCTGGATTGGGGGATGTATTAGTTTGCTAAGACTGCCACAGAATTGGATGTTATaGGTCTCTGCTCACATCATC +
Preference number: 2 (lower is better)
Translates to: SKGGQFWIGGCISLLRLPQNWML*VSAHII
Trigger: GATGATGTGAGCAGAGACGCATAACATCCAATTCTG...TGGCAGTCTTAGCAAACTAATACATCCCCCAATCCAGAACTGTCCTCCTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp TCCAAAGGAGGACAGTTCTGGATTGGGGGATGTATTAGTTTGCTAAGACTGCCATTTGAGCATCTCTTATaGCACCGACCTGATGGTTTA +
Preference number: 2 (lower is better)
Translates to: SKGGQFWIGGCISLLRLPFEHLL*HRPDGL
Trigger: TAAACCATCAGGTCGGTGCCATAAGAGATGCTCAAA...TGGCAGTCTTAGCAAACTAATACATCCCCCAATCCAGAACTGTCCTCCTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCAGGTAGGTGGGTCATTTaGGCCCAGGTGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVAGRWVI*AQVFET
Trigger: GGTCTCAAACACCTGGGCTCAAATGACCCACCTACC...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
3UTR-3UTR GCA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTCCAGGTCCTTCTCTGTaGCCTACCAACATTTTTGTT +
Preference number: 2 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLPGPSL*PTNIFV
Trigger: AACAAAAATGTTGGTAGGGCACAGAGAAGGACCTGG...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp TCCAAAGGAGGACAGTTCTGGATTGGGGGATGTATTAGTTTGCTAAGACTGCCAGTTTCATCTCAGAATTaGATGTTATGCGTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: SKGGQFWIGGCISLLRLPVSSQN*MLCVSA
Trigger: AGCAGAGACGCATAACATCCAATTCTGAGATGAAAC...TGGCAGTCTTAGCAAACTAATACATCCCCCAATCCAGAACTGTCCTCCTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp AATGGAATGGGGGACAGAACTATTGATCTGATCGCCCTTTCCCTCAGAACAGTCTTCCTAACATTCAAATaGCTGTCAGGCAAAACACAA +
Preference number: 2 (lower is better)
Translates to: NGMGDRTIDLIALSLRTVFLTFK*LSGKTQ
Trigger: TTGTGTTTTGCCTGACAGCCATTTGAATGTTAGGAA...GACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACATGGGTGATGGGGGAATaGAATGGGGGACAGAACTAT +
Preference number: 2 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTWVMGE*NGGQNY
Trigger: ATAGTTCTGTCCCCCATTCCATTCCCCCATCACCCA...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 90 bp GTGCCTGAGTACTTTGATTTCAGTGACTCAAGCACCTTCTTTGTTTaGCTCACTAGAAACGAATTAGAAAACTCTTCAAGCAGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: VPEYFDFSDSSTFFV*LTRNELENSSSRGR
Trigger: TCTCCCCCTGCTTGAAGAGTTTTCTAATTCGTTTCTAGTGAGCAAAACAAAGAAGGTGCTTGAGTCACTGAAATCAAAGTACTCAGGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 90 bp ATTCTAAGGAAGCCTTATATCATAGGTGAGAAGGTTTGTTTGAAATaGGCAAGGAGCAAGGTACATGAGGGAGTTTGCATTGTCCACAGC +
Preference number: 2 (lower is better)
Translates to: ILRKPYIIGEKVCLK*ARSKVHEGVCIVHS
Trigger: GCTGTGGACAATGCAAACTCCCTCATGTACCTTGCTCCTTGCCAATTTCAAACAAACCTTCTCACCTATGATATAAGGCTTCCTTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 90 bp CTTGATGAGCTATTGGCCAGGGGTGCTTTGGAAGGATTCTTTCATTaGAAAGGTGGTTGGACTAGAGGAACTTACAAATTCACCTCAATT +
Preference number: 2 (lower is better)
Translates to: LDELLARGALEGFFH*KGGWTRGTYKFTSI
Trigger: AATTGAGGTGAATTTGTAAGTTCCTCTAGTCCAACCACCTTTCAAATGAAAGAATCCTTCCAAAGCACCCCTGGCCAATAGCTCATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp AGTAATGTTTTAACAGATACCTCTCTTCTCATCAGCTCCCCTCAAACCATCCCTAAAAACACGAGCTGCTaGAAGAAGTCTGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: SNVLTDTSLLISSPQTIPKNTSC*KKSAET
Trigger: TGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTT...AGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR GCA 90 bp GTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCCTATTTGATGTTATGCGTCTCTaGTCACATCATCCATGTAGC +
Preference number: 2 (lower is better)
Translates to: VQSLHFTLQQVVHALLLFDVMRL*SHHPCS
Trigger: GCTACATGGATGATGTGAGCAGAGACGCATAACATC...AAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR-3UTR GCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCTTTAGCCTCATAGCATaGAAATTTCACATTTTGCCT +
Preference number: 2 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFFSLIA*KFHILP
Trigger: AGGCAAAATGTGAAATTTGCATGCTATGAGGCTAAA...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR GCA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTTCCAGCAGGTGTTATTaGTACTCCTGTGATCCTTTT +
Preference number: 2 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLSSRCY*YSCDPF
Trigger: AAAAGGATCACAGGAGTAGCAATAACACCTGCTGGA...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CCA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTAATCTGATGCAGGAATaGGGCAAGAGAAGTTTCCTA +
Preference number: 2 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLNLMQE*GKRSFL
Trigger: TAGGAAACTTCTCTTGCCCCATTCCTGCATCAGATT...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 90 bp AGAATATCTAAGCAAAATCTTGATGAGCTATTGGCCAGGGGTGCTTaGGAAGGATTCTTTCATTTGAAAGGTGGTTGGACTAGAGGAACT +
Preference number: 2 (lower is better)
Translates to: RISKQNLDELLARGA*EGFFHLKGGWTRGT
Trigger: AGTTCCTCTAGTCCAACCACCTTTCAAATGAAAGAATCCTTCCAAAGCACCCCTGGCCAATAGCTCATCAAGATTTTGCTTAGATATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACAATCACAGATCTGCCTTaGACCCTAGCTTCTACACAT +
Preference number: 2 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTITDLP*TLASTH
Trigger: ATGTGTAGAAGCTAGGGTTCAAGGCAGATCTGTGAT...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR GCA 90 bp AGTAATGTTTTAACAGATACCTCTCTTCTCATCAGCTCCCCTCAAACCATCCCTTTCCTCTCTCTGAACTaGTATTTCCCTACTGAAAAC +
Preference number: 2 (lower is better)
Translates to: SNVLTDTSLLISSPQTIPFLSLN*YFPTEN
Trigger: GTTTTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAA...AGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATAAAAACCATTGTATCTaGGACCCTATGAAGAACTAC +
Preference number: 2 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYKNHCI*DPMKNY
Trigger: GTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTT...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR CAA 90 bp CTAATGTTATTGTCCGAATTGATTTCCATTGAGAGAACATGTGGATaGAATGGAAAAGATCCTCATTCAGGTCCAGCAGGTGTTATTGCT +
Preference number: 2 (lower is better)
Translates to: LMLLSELISIERTCG*NGKDPHSGPAGVIA
Trigger: AGCAATAACACCTGCTGGACCTGAATGAGGATCTTTTCCATTCAATCCACATGTTCTCTCAATGGAAATCAATTCGGACAATAACATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGCCACATTGCTACGGTTaGTTGATGTTAAAGAAAGAC +
Preference number: 2 (lower is better)
Translates to: TFRFSNPKIQASESMKTSPHCYG*LMLKKD
Trigger: GTCTTTCTTTAACATCAATCAACCGTAGCAATGTGG...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCATTGAGCCCAGGTGTTTaGGACCAGTCTGAACAAAAT +
Preference number: 2 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVALSPGV*DQSEQN
Trigger: ATTTTGTTCAGACTGGTCTCAAACACCTGGGCTCAA...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
3UTR-3UTR CCA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTGGAATAGGGAATAAATaGATCCTGAGCAACATTAAT +
Preference number: 2 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLGIGNK*ILSNIN
Trigger: ATTAATGTTGCTCAGGATCCATTTATTCCCTATTCC...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 90 bp CTTTGGATCGGTTCTATTTCTCTATTTCCCTATTACTTTTCACCCTaGGGCCACTTCCTAATTCACATAAATCCTTATGTCAGAGGAATT +
Preference number: 2 (lower is better)
Translates to: LWIGSISLFPYYFSP*GHFLIHINPYVRGI
Trigger: AATTCCTCTGACATAAGGATTTATGTGAATTAGGAAGTGGCCCAAGGGTGAAAAGTAATAGGGAAATAGAGAAATAGAACCGATCCAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 90 bp ACCTTAAGTGTATTTACTTCTTTCAAGGCATCATCTCTTTCACACTaGAGCCTTTCCATTTCATCTGCTTCTGAAGAATCACAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: TLSVFTSFKASSLSH*SLSISSASEESQGR
Trigger: TCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463234.1
3UTR-3UTR TCA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGAAAAACCATTGTATCTaGGACCCTATGAAGAACTAC +
Preference number: 2 (lower is better)
Translates to: TFRFSNPKIQASESMKTSKNHCI*DPMKNY
Trigger: GTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTT...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR TCA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACATTATTTCCTAGACAGTaGGTAAGAAAGCCTCATCTT +
Preference number: 2 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTLFPRQ*VRKPHL
Trigger: AAGATGAGGCTTTCTTACTCACTGTCTAGGAAATAA...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR GCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCACACAGGATCCAAAATTaGCACGACTTGCTTTATTGG +
Preference number: 2 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVAHRIQN*HDLLYW
Trigger: CCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTG...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
3UTR TCA 72 bp GGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTaGGCCGAGATTGCGCCGCTGCAGTCCGCAGTCCCG +
Preference number: 3 (lower is better)
Translates to: GEWREPGKRSLQ*AEIAPLQSAVP
Trigger: CGGGACTGCGGACTGCAGCGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 72 bp ACAGTGTCCTGCGTGATGGGCTGTGACCTCCCTCCGTaGAGACAGCAGGGTATGGGGGAAGGGGGACTGCTC +
Preference number: 3 (lower is better)
Translates to: TVSCVMGCDLPP*RQQGMGEGGLL
Trigger: GAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR TCA 72 bp GAGCCAGCTGCATCAACACAATCACAGTGTCCTGCGTaGTGGGCTGTGACCTCCCTCCGTGGAGACAGCAGG +
Preference number: 3 (lower is better)
Translates to: EPAASTQSQCPA*WAVTSLRGDSR
Trigger: CCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR CCA 72 bp TGGGCTGTGACCTCCCTCCGTGGAGACAGCAGGGTATaGGGGAAGGGGGACTGCTCATGGAATCAGAAGACT +
Preference number: 3 (lower is better)
Translates to: WAVTSLRGDSRV*GKGDCSWNQKT
Trigger: AGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR-3UTR CAA 90 bp CGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCACTCAAGCACCTTCTTaGTTTTGCTCACTAGAAACG +
Preference number: 3 (lower is better)
Translates to: RDCAAAVRSPAWATERDSTQAPS*FCSLET
Trigger: CGTTTCTAGTGAGCAAAACAAAGAAGGTGCTTGAGT...GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp ACTAGAACTCAGCTCAGTCCTTGTGTAGGTGCAGGGTaGCCTACCTGTCCTGGCTTGCCCAGAGCTGAGGGA +
Preference number: 3 (lower is better)
Translates to: TRTQLSPCVGAG*PTCPGLPRAEG
Trigger: TCCCTCAGCTCTGGGCAAGCCAGGACAGGTAGGTCACCCTGCACCTACACAAGGACTGAGCTGAGTTCTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 72 bp CAGGCTACAGGAACATGCTTTGACTGCATTGCAGGCTaGAAGCACCTGGAAATTTACACCCACCCCCACCCC +
Preference number: 3 (lower is better)
Translates to: QATGTCFDCIAG*KHLEIYTHPHP
Trigger: GGGGTGGGGGTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCCTGTAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CAA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATAATAGAGGGGCCATGTTaGACCGAAGAGGTGCCTTCT +
Preference number: 3 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIIEGPC*TEEVPS
Trigger: AGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTAT...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR GCA 72 bp CTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTaGATCAACACAATCACAGTGTCCTGCGTGATGGGC +
Preference number: 3 (lower is better)
Translates to: LNLCGMHSCGAS*INTITVSCVMG
Trigger: GCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR GCA 72 bp GACTATGTTCTAAGGACCTCTAGGTCTGCACAGCAGTaGTGGGAGCTGCTCGACTTGGGCTTTAGGCTTCCA +
Preference number: 3 (lower is better)
Translates to: DYVLRTSRSAQQ*WELLDLGFRLP
Trigger: TGGAAGCCTAAAGCCCAAGTCGAGCAGCTCCCAGCACTGCTGTGCAGACCTAGAGGTCCTTAGAACATAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 72 bp AAAAATGCAGGCATGGCATCCATAGAGTGCCAGCTCTaGGCATGGGGAAGGCAGCATGTGTCAAGGAGCTCT +
Preference number: 3 (lower is better)
Translates to: KNAGMASIECQL*AWGRQHVSRSS
Trigger: AGAGCTCCTTGACACATGCTGCCTTCCCCATGCCCAGAGCTGGCACTCTATGGATGCCATGCCTGCATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp TATAGAGGGGCCATGTTTGACCGAAGAGGTGCCTTCTaGATCTCTGTGGAATGCACAGCTGTGGAGCCAGCT +
Preference number: 3 (lower is better)
Translates to: YRGAMFDRRGAF*ISVECTAVEPA
Trigger: AGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR TCA 72 bp CAGGGCGGCAAGTGGTACAAAACAGCAGTTAATGGATaGGGTGTCTCTTGTCAGTGGGCTGTGTGCCTGAGT +
Preference number: 3 (lower is better)
Translates to: QGGKWYKTAVNG*GVSCQWAVCLS
Trigger: ACTCAGGCACACAGCCCACTGACAAGAGACACCTCATCCATTAACTGCTGTTTTGTACCACTTGCCGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp TGGGTGATGGGGGAATGGAATGGGGGACAGAACTATTaGTCTGATCGCCCTTTCCCTCAGAACAGTCCAACC +
Preference number: 3 (lower is better)
Translates to: WVMGEWNGGQNY*SDRPFPQNSPT
Trigger: GGTTGGACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATTCCCCCATCACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 72 bp GGCTTGCTCTCTGCTTCAAAGATGGCAACTTCTTGCTaGATCCTCACAAGGCAGAAGGGGCAAACAGGTTCC +
Preference number: 3 (lower is better)
Translates to: GLLSASKMATSC*ILTRQKGQTGS
Trigger: GGAACCTGTTTGCCCCTTCTGCCTTGTGAGGATGCAGCAAGAAGTTGCCATCTTTGAAGCAGAGAGCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 72 bp GAGGGCTTGCTCTCTGCTTCAAAGATGGCAACTTCTTaGTGCATCCTCACAAGGCAGAAGGGGCAAACAGGT +
Preference number: 3 (lower is better)
Translates to: EGLLSASKMATS*CILTRQKGQTG
Trigger: ACCTGTTTGCCCCTTCTGCCTTGTGAGGATGCAGCAAGAAGTTGCCATCTTTGAAGCAGAGAGCAAGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 72 bp GACGGCTGTCCTCAGGCTACAGGAACATGCTTTGACTaGATTGCAGGCTGGAAGCACCTGGAAATTTACACC +
Preference number: 3 (lower is better)
Translates to: DGCPQATGTCFD*IAGWKHLEIYT
Trigger: GGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCCTGTAGCCTGAGGACAGCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 72 bp GAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTaGAGCCAGCTGCATCAACACAATCACAGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: EVPSESLWNAQL*SQLHQHNHSVL
Trigger: CAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR CCA 72 bp TATGTTCTAAGGACCTCTAGGTCTGCACAGCAGTGCTaGGAGCTGCTCGACTTGGGCTTTAGGCTTCCATCT +
Preference number: 3 (lower is better)
Translates to: YVLRTSRSAQQC*ELLDLGFRLPS
Trigger: AGATGGAAGCCTAAAGCCCAAGTCGAGCAGCTCCCAGCACTGCTGTGCAGACCTAGAGGTCCTTAGAACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CAA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACTGGGAGCTGCTCGACTaGGGCTTTAGGCTTCCATCT +
Preference number: 3 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHWELLD*GFRLPS
Trigger: AGATGGAAGCCTAAAGCCCAAGTCGAGCAGCTCCCA...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CAA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGAATGTGATGGGTAGATaGATGGGGACAGGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: TTVTENRAVIARSWGGEGNVMGR*MGTGVV
Trigger: CACCACACCTGTCCCCATCAATCTACCCATCACATT...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp GCATCCTCACAAGGCAGAAGGGGCAAACAGGTTCCCTaGAGCCTCTTTCATAAGGGTCCTAATCCCATTCAC +
Preference number: 3 (lower is better)
Translates to: ASSQGRRGKQVP*SLFHKGPNPIH
Trigger: GTGAATGGGATTAGGACCCTTATGAAAGAGGCTTCAGGGAACCTGTTTGCCCCTTCTGCCTTGTGAGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp GTTGGACGGCTGTCCTCAGGCTACAGGAACATGCTTTaGCTGCATTGCAGGCTGGAAGCACCTGGAAATTTA +
Preference number: 3 (lower is better)
Translates to: VGRLSSGYRNML*LHCRLEAPGNL
Trigger: TAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCCTGTAGCCTGAGGACAGCCGTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 72 bp GCTCATGGAATCAGAAGACTTAGGAGTGAGTCTCGGTaGTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTA +
Preference number: 3 (lower is better)
Translates to: AHGIRRLRSESR*WDRELPLSELL
Trigger: TAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR-3UTR CAA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGGTATTGTCTCACAGTTaGGAGGCTAGAAGTCCAAGG +
Preference number: 3 (lower is better)
Translates to: TTVTENRAVIARSWGGEGVLSHS*EARSPR
Trigger: CCTTGGACTTCTAGCCTCCAAACTGTGAGACAATAC...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp ACTCTCTTGAGGTGGAAGTTCTTGCTCTACCACTCCTaGGTGGGAAGTGGGGTTGGGCAGGTGTGTAAAAAT +
Preference number: 3 (lower is better)
Translates to: TLLRWKFLLYHS*VGSGVGQVCKN
Trigger: ATTTTTACACACCTGCCCAACCCCACTTCCCACTCAGGAGTGGTAGAGCAAGAACTTCCACCTCAAGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 72 bp AATCAATCTAATCCTCCAATGTTGACCACATTGGGCTaGAGGAAGCTCACTGGCGTTGTCCAAGGTCCCACT +
Preference number: 3 (lower is better)
Translates to: NQSNPPMLTTLG*RKLTGVVQGPT
Trigger: AGTGGGACCTTGGACAACGCCAGTGAGCTTCCTCCAGCCCAATGTGGTCAACATTGGAGGATTAGATTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 72 bp AGCCTCTTAATATACCAGACCTGGTCATCGCCCACATaGGCTTGCACCTTTAAGATGGTGCCACTTGGAAGT +
Preference number: 3 (lower is better)
Translates to: SLLIYQTWSSPT*ACTFKMVPLGS
Trigger: ACTTCCAAGTGGCACCATCTTAAAGGTGCAAGCCCATGTGGGCGATGACCAGGTCTGGTATATTAAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CAA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGTGTTTTGTCTTCCTGTaGTCTCTTCTCGTGTGTGCT +
Preference number: 3 (lower is better)
Translates to: TTVTENRAVIARSWGGEGCFVFL*SLLVCA
Trigger: AGCACACACGAGAAGAGACAACAGGAAGACAAAACA...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp GTGTACGATCAAGATGCCAGCAGATTTAGCTTCTGGTaGGGGCTTGCTCTCTGCTTCAAAGATGGCAACTTC +
Preference number: 3 (lower is better)
Translates to: VYDQDASRFSFW*GLALCFKDGNF
Trigger: GAAGTTGCCATCTTTGAAGCAGAGAGCAAGCCCTCACCAGAAGCTAAATCTGCTGGCATCTTGATCGTACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 72 bp CTGGAGGAAGCTCACTGGCGTTGTCCAAGGTCCCACTaGCTAAACATACCACATAATCATTTCCATTCTAGG +
Preference number: 3 (lower is better)
Translates to: LEEAHWRCPRSH*LNIPHNHFHSR
Trigger: CCTAGAATGGAAATGATTATGTGGTATGTTTAGGCAGTGGGACCTTGGACAACGCCAGTGAGCTTCCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 72 bp CATGGAATCAGAAGACTTAGGAGTGAGTCTCGGTGCTaGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTT +
Preference number: 3 (lower is better)
Translates to: HGIRRLRSESRC*DRELPLSELLF
Trigger: AAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR CCA 72 bp ACAAATGTAATTGAGGTTTTGCTGCTCCCTGGAACTTaGTCCAGAAGGTTAAGCCCAGGTCCTTCTCTGTGC +
Preference number: 3 (lower is better)
Translates to: TNVIEVLLLPGT*SRRLSPGPSLC
Trigger: GCACAGAGAAGGACCTGGGCTTAACCTTCTGGACCAAGTTCCAGGGAGCAGCAAAACCTCAATTACATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp TTTGGGTTCACAGAAATCAATCTAATCCTCCAATGTTaGCCACATTGGGCTGGAGGAAGCTCACTGGCGTTG +
Preference number: 3 (lower is better)
Translates to: FGFTEINLILQC*PHWAGGSSLAL
Trigger: CAACGCCAGTGAGCTTCCTCCAGCCCAATGTGGTCAACATTGGAGGATTAGATTGATTTCTGTGAACCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 72 bp TTAATATACCAGACCTGGTCATCGCCCACATGGGCTTaGACCTTTAAGATGGTGCCACTTGGAAGTTTGTTC +
Preference number: 3 (lower is better)
Translates to: LIYQTWSSPTWA*TFKMVPLGSLF
Trigger: GAACAAACTTCCAAGTGGCACCATCTTAAAGGTGCAAGCCCATGTGGGCGATGACCAGGTCTGGTATATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CAA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGTGTTTCATCTCAGAATaGGATGTTATGCGTCTCTGC +
Preference number: 3 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWCFISE*DVMRLC
Trigger: GCAGAGACGCATAACATCCAATTCTGAGATGAAACA...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR-3UTR CAA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGAGCACCTTCTTTGTTTaGCTCACTAGAAACGAATTA +
Preference number: 3 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLSTFFV*LTRNEL
Trigger: TAATTCGTTTCTAGTGAGCAAAACAAAGAAGGTGCT...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CAA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCAGACGTGATTGCAGTATaGCACTCCAGCCTGGGCGAC +
Preference number: 3 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVADVIAV*HSSLGD
Trigger: GTCGCCCAGGCTGGAGTGCAATACTGCAATCACGTC...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
3UTR TCA 72 bp ATGTCCTGCAGGACTGCTCAACCAATGATACTGCTCTaGGATAAGTTGACATCCATAATCACAGAATTGGCC +
Preference number: 3 (lower is better)
Translates to: MSCRTAQPMILL*DKLTSIITELA
Trigger: GGCCAATTCTGTGATTATGGATGTCAACTTATCTCAGAGCAGTATCATTGGTTGAGCAGTCCTGCAGGACAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 72 bp TGGAAAAGATCCTCATTCAGGTCCAGCAGGTGTTATTaGTACTCCTGTGATCCTTTTGGGTTCACAGAAATC +
Preference number: 3 (lower is better)
Translates to: WKRSSFRSSRCY*YSCDPFGFTEI
Trigger: GATTTCTGTGAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGATCTTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 72 bp TTGAAATTGGCAAGGAGCAAGGTACATGAGGGAGTTTaGATTGTCCACAGCCTTAAAGGTTCACTTCACACA +
Preference number: 3 (lower is better)
Translates to: LKLARSKVHEGV*IVHSLKGSLHT
Trigger: TGTGTGAAGTGAACCTTTAAGGCTGTGGACAATGCAAACTCCCTCATGTACCTTGCTCCTTGCCAATTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 72 bp GGCCCAAAGAACTCGAAGATGCATTTGTATTGTGCTTaGTACTTTAGTGAACGTCTCACCCAAGTTAGCTCA +
Preference number: 3 (lower is better)
Translates to: GPKNSKMHLYCA*YFSERLTQVSS
Trigger: TGAGCTAACTTGGGTGAGACGTTCACTAAAGTACCAAGCACAATACAAATGCATCTTCGAGTTCTTTGGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp TCCTTCTCACAGCCAGGAGAATTATTTCCTAGACAGTaGGTAAGAAAGCCTCATCTTCCTCATCATATGTGC +
Preference number: 3 (lower is better)
Translates to: SFSQPGELFPRQ*VRKPHLPHHMC
Trigger: GCACATATGATGAGGAAGATGAGGCTTTCTTACTCACTGTCTAGGAAATAATTCTCCTGGCTGTGAGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 72 bp CCTTTGAGTAAAATCACTCACCACAGTATTAGTGACTaGTACCTCTGGAAAGTGAGACAGGCTATCTCTTAC +
Preference number: 3 (lower is better)
Translates to: PLSKITHHSISD*YLWKVRQAISY
Trigger: GTAAGAGATAGCCTGTCTCACTTTCCAGAGGTAGCAGTCACTAATACTGTGGTGAGTGATTTTACTCAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CAA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTTGTTTCATCTCAGAATaGGATGTTATGCGTCTCTGC +
Preference number: 3 (lower is better)
Translates to: KPRINIPTRSASRACCMVCFISE*DVMRLC
Trigger: GCAGAGACGCATAACATCCAATTCTGAGATGAAACA...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR-3UTR CAA 90 bp TCCAAAGGAGGACAGTTCTGGATTGGGGGATGTATTAGTTTGCTAAGACTGCCAACCACATTGCTACGGTaGATTGATGTTAAAGAAAGA +
Preference number: 3 (lower is better)
Translates to: SKGGQFWIGGCISLLRLPTTLLR*IDVKER
Trigger: TCTTTCTTTAACATCAATCAACCGTAGCAATGTGGT...TGGCAGTCTTAGCAAACTAATACATCCCCCAATCCAGAACTGTCCTCCTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CAA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACAGGTAGGATTTCAGAGTaGGAAGCCTTCCAGTTAACC +
Preference number: 3 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTGRISE*EAFQLT
Trigger: GGTTAACTGGAAGGCTTCCAACTCTGAAATCCTACC...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp GATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATaGAGACTTCGTGATGACCACATTGCTACGGTTGAT +
Preference number: 3 (lower is better)
Translates to: DFLTLKSKPVSQ*RLRDDHIATVD
Trigger: ATCAACCGTAGCAATGTGGTCATCACGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp CTCACCACAGTATTAGTGACTGCTACCTCTGGAAAGTaGGACAGGCTATCTCTTACTTTATTCACTTCCAAA +
Preference number: 3 (lower is better)
Translates to: LTTVLVTATSGK*DRLSLTLFTSK
Trigger: TTTGGAAGTGAATAAAGTAAGAGATAGCCTGTCTCACTTTCCAGAGGTAGCAGTCACTAATACTGTGGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp TATTGGCCAGGGGTGCTTTGGAAGGATTCTTTCATTTaGAAGGTGGTTGGACTAGAGGAACTTACAAATTCA +
Preference number: 3 (lower is better)
Translates to: YWPGVLWKDSFI*KVVGLEELTNS
Trigger: TGAATTTGTAAGTTCCTCTAGTCCAACCACCTTTCAAATGAAAGAATCCTTCCAAAGCACCCCTGGCCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 72 bp AAACAATATAAATGTATTGTTCACAGCTCTGGAGGCTaGGAAGTGTACGATCAAGATGCCAGCAGATTTAGC +
Preference number: 3 (lower is better)
Translates to: KQYKCIVHSSGG*EVYDQDASRFS
Trigger: GCTAAATCTGCTGGCATCTTGATCGTACACTTCCCAGCCTCCAGAGCTGTGAACAATACATTTATATTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CAA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTGAAGGATTCTTTCATTaGAAAGGTGGTTGGACTAGA +
Preference number: 3 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLEGFFH*KGGWTR
Trigger: TCTAGTCCAACCACCTTTCAAATGAAAGAATCCTTC...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp TCATTACAATTGTTTAGGCCTTTTTCACTAGGTATTTaGCAGAAACAGGGCGGCAAGTGGTACAAAACAGCA +
Preference number: 3 (lower is better)
Translates to: SLQLFRPFSLGI*QKQGGKWYKTA
Trigger: TGCTGTTTTGTACCACTTGCCGCCCTGTTTCTGTCAAATACCTAGTGAAAAAGGCCTAAACAATTGTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 72 bp ACTCTCTACAAAGAAACACCAGGAATAGGGAATAAATaGATCCTGAGCAACATTAATCTCAGGCAACTTGCA +
Preference number: 3 (lower is better)
Translates to: TLYKETPGIGNK*ILSNINLRQLA
Trigger: TGCAAGTTGCCTGAGATTAATGTTGCTCAGGATCCATTTATTCCCTATTCCTGGTGTTTCTTTGTAGAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp GACAACTCTAGCATTTCTAGCAGGAAAAACAAATCCTaGAAAAGCATCAAATGCAGTGAATCTGACCACACA +
Preference number: 3 (lower is better)
Translates to: DNSSISSRKNKS*KSIKCSESDHT
Trigger: TGTGTGGTCAGATTCACTGCATTTGATGCTTTTTCAGGATTTGTTTTTCCTGCTAGAAATGCTAGAGTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR GCA 72 bp CCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATaGTTTACTCCTATTTTAGACTGTTTCATCTCAGAA +
Preference number: 3 (lower is better)
Translates to: PESPFHTSTSSA*FTPILDCFISE
Trigger: TTCTGAGATGAAACAGTCTAAAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR CCA 72 bp TTATTGCTGTTTTTATTATCCAAAGGAGGACAGTTCTaGATTGGGGGATGTATTAGTTTGCTAAGACTGCCA +
Preference number: 3 (lower is better)
Translates to: LLLFLLSKGGQF*IGGCISLLRLP
Trigger: TGGCAGTCTTAGCAAACTAATACATCCCCCAATCCAGAACTGTCCTCCTTTGGATAATAAAAACAGCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR-3UTR CAA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCATCACAGGATCCAAAATaGCCACGACTTGCTTTATTG +
Preference number: 3 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVASQDPK*PRLALL
Trigger: CAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGA...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
3UTR TCA 72 bp CTGACTGCAGCATTGTTCAGTTTGCAGTTTCAGTTTTaGGGCTATAAGAATATATGCATCCAAGAAAGTAAC +
Preference number: 3 (lower is better)
Translates to: LTAALFSLQFQF*GYKNICIQESN
Trigger: GTTACTTTCTTGGATGCATATATTCTTATAGCCTCAAAACTGAAACTGCAAACTGAACAATGCTGCAGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR TCA 72 bp ATGTTATTTATCCTGATGGCAGAGAGGGTGTTACCGTaGAAAATTGTGGTTTATGACAACTCTGATTCAAAA +
Preference number: 3 (lower is better)
Translates to: MLFILMAERVLP*KIVVYDNSDSK
Trigger: TTTTGAATCAGAGTTGTCATAAACCACAATTTTTCACGGTAACACCCTCTCTGCCATCAGGATAAATAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 72 bp AATTCAGATTGCTGGGATAGTGTTTCCATTTTCTCCTaGGGAATTCTTTTCTTATCAGCTCTAATTACTAGA +
Preference number: 3 (lower is better)
Translates to: NSDCWDSVSIFS*GILFLSALITR
Trigger: TCTAGTAATTAGAGCTGATAAGAAAAGAATTCCCCAGGAGAAAATGGAAACACTATCCCAGCAATCTGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 72 bp AACAATGAAACAAATCTCATTGCTGACACAGCTTTCTaGGAATTTCCAATCCTAGAGAATGAATGTATCACA +
Preference number: 3 (lower is better)
Translates to: NNETNLIADTAF*EFPILENECIT
Trigger: TGTGATACATTCATTCTCTAGGATTGGAAATTCCCAGAAAGCTGTGTCAGCAATGAGATTTGTTTCATTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CCA 72 bp ATAAGGCTCACATACACTATTGGTGGTAATGTAAGTTaGTCCTACTTTTATGGAGAATTTATGGATATGTAC +
Preference number: 3 (lower is better)
Translates to: IRLTYTIGGNVS*SYFYGEFMDMY
Trigger: GTACATATCCATAAATTCTCCATAAAAGTAGGACCAACTTACATTACCACCAATAGTGTATGTGAGCCTTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp CGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCATGGCATCCATAGAGTaGCAGCTCTGGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: RDCAAAVRSPAWATERDSMASIE*QLWAWG
Trigger: TCCCCATGCCCAGAGCTGGCACTCTATGGATGCCAT...GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp CGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCTCGCCCACATGGGCTTaGACCTTTAAGATGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RDCAAAVRSPAWATERDSSPTWA*TFKMVP
Trigger: TGGCACCATCTTAAAGGTGCAAGCCCATGTGGGCGA...GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCCTTTCCTTTGTGCCCTaGAAGCCCCTCAACATCTTT +
Preference number: 4 (lower is better)
Translates to: RDCAAAVRSPAWATERDSLSFVP*KPLNIF
Trigger: AAAGATGTTGAGGGGCTTCCAGGGCACAAAGGAAAG...GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp TATGGGGGAAGGGGGACTGCTCATGGAATCAGAAGACTTAGGAGTGAGTCTCGGCCGAGATTGCGCCGCTaGAGTCCGCAGTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: YGGRGTAHGIRRLRSESRPRLRR*SPQSRL
Trigger: CAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCGG...CCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTGGCTTTCCCGTAATCTaGCAACCCGGCCTCCGTAGC +
Preference number: 4 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVGFPVI*QPGLRS
Trigger: GCTACGGAGGCCGGGTTGCCAGATTACGGGAAAGCC...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTGGAGACAGCAGGGTATaGGGGAAGGGGGACTGCTCA +
Preference number: 4 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVGDSRV*GKGDCS
Trigger: TGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCC...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp CGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCAAACAGGGCGGCAAGTaGTACAAAACAGCAGTTAAT +
Preference number: 4 (lower is better)
Translates to: RDCAAAVRSPAWATERDSKQGGK*YKTAVN
Trigger: ATTAACTGCTGTTTTGTACCACTTGCCGCCCTGTTT...GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTGGCTTGCCCAGAGCTaGGGGAGTTCCCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVWLAQS*GSSQDL
Trigger: CAAATCCTGGGAACTCCCTCAGCTCTGGGCAAGCCA...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCAGCTCATTTGAAAGTTaGTCCTCGCAACCATTACAT +
Preference number: 4 (lower is better)
Translates to: RDCAAAVRSPAWATERDSSSFES*SSQPLH
Trigger: ATGTAATGGTTGCGAGGACCAACTTTCAAATGAGCT...GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCTCACAGTGTCCTGCGTaGTGGGCTGTGACCTCCCTC +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCISQCPA*WAVTSL
Trigger: GAGGGAGGTCACAGCCCATCACGCAGGACACTGTGA...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp CGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCAGAGAACATGTGGATTaGATGGAAAAGATCCTCATT +
Preference number: 4 (lower is better)
Translates to: RDCAAAVRSPAWATERDSREHVD*MEKILI
Trigger: AATGAGGATCTTTTCCATTCAATCCACATGTTCTCT...GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATATGGCGAAGGCTTGGGTaGAGAGAAGGGGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIWRRLG*REGGRV
Trigger: AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCA...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp CGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCCTGAAACATTTCTCATaGCTAATGACTACCTATCAG +
Preference number: 4 (lower is better)
Translates to: RDCAAAVRSPAWATERDSLKHFS*LMTTYQ
Trigger: CTGATAGGTAGTCATTAGCCATGAGAAATGTTTCAG...GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTCCTTCCCAGTGGTGTaGGGGAAGTCTGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVSFPVV*GKSEKL
Trigger: TAGCTTCTCAGACTTCCCTCACACCACTGGGAAGGA...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGTCACAGTGTCCTGCGTaGTGGGCTGTGACCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLSQCPA*WAVTSL
Trigger: GAGGGAGGTCACAGCCCATCACGCAGGACACTGTGA...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGGGTCAAGGTGTCAGCTaGGCACCGCTCCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLGQGVS*APLPLK
Trigger: CTTCAGAGGGAGCGGTGCCCAGCTGACACCTTGACC...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATAACAATCACAGTGTCCTaGGTGATGGGCTGTGACCTC +
Preference number: 4 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFITITVS*VMGCDL
Trigger: GAGGTCACAGCCCATCACGCAGGACACTGTGATTGT...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTCCATTCCTTCCCAGTaGTGTGAGGGAAGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVSIPSQ*CEGSLR
Trigger: TCTCAGACTTCCCTCACACCACTGGGAAGGAATGGA...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATATTGACCACATTGGGCTaGAGGAAGCTCACTGGCGTT +
Preference number: 4 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFILTTLG*RKLTGV
Trigger: AACGCCAGTGAGCTTCCTCCAGCCCAATGTGGTCAA...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGTGCCAGCTCTGGGCATaGGGAAGGCAGCATGTGTCA +
Preference number: 4 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLCQLWA*GRQHVS
Trigger: TGACACATGCTGCCTTCCCCATGCCCAGAGCTGGCA...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTAGAGCTTCCTCTCTCTaGACTGCTATTTCCCTACTG +
Preference number: 4 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVRASSL*TAISLL
Trigger: CAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCT...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAAAGCGCCAGCGTTGCTaGGATGCTACGTCCATTCCT +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEKRQRC*DATSIP
Trigger: AGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTT...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp AATGGAATGGGGGACAGAACTATTGATCTGATCGCCCTTTCCCTCAGAACAGTCGGAGACAGCAGGGTATaGGGGAAGGGGGACTGCTCA +
Preference number: 4 (lower is better)
Translates to: NGMGDRTIDLIALSLRTVGDSRV*GKGDCS
Trigger: TGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCC...GACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAAAGAGTGCGCCTACTTaGCGAAGGCTTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEKSAPT*RRLGCR
Trigger: TCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTT...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTGTCCGCAGTCCCGCCTaGGCGACAGAGCGAGACTCC +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVVRSPA*ATERDS
Trigger: GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGAC...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 72 bp AGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTaGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: SLLKQYHKECAY*AKAWVQRRGKG
Trigger: ACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
3UTR CAA 72 bp GCTGTCCTCAGGCTACAGGAACATGCTTTGACTGCATaGCAGGCTGGAAGCACCTGGAAATTTACACCCACC +
Preference number: 4 (lower is better)
Translates to: AVLRLQEHALTA*QAGSTWKFTPT
Trigger: GGTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCCTGTAGCCTGAGGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAACTGCCCTCACGAAGCTaGCTCCCATTATTACTCCCA +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTELPSRS*LPLLLP
Trigger: TGGGAGTAATAATGGGAGTCAGCTTCGTGAGGGCAG...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATACACATCTACAAAGAATaGCCAACAGTGGGACCAGTC +
Preference number: 4 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIHIYKE*PTVGPV
Trigger: GACTGGTCCCACTGTTGGTCATTCTTTGTAGATGTG...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAGGTGTCTCTTGTCAGTaGGCTGTGTGCCTGAGTACT +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEGVSCQ*AVCLST
Trigger: AGTACTCAGGCACACAGCCCACTGACAAGAGACACC...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATATATTGTTCACAGCTCTaGAGGCTGGGAAGTGTACGA +
Preference number: 4 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIYCSQL*RLGSVR
Trigger: TCGTACACTTCCCAGCCTCCAGAGCTGTGAACAATA...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAATGGCCTAGGCTTCAATaGGGAGGTATTCCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEWPRLQ*GGIPWS
Trigger: TGACCAGGGAATACCTCCCCATTGAAGCCTAGGCCA...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AGTAATGTTTTAACAGATACCTCTCTTCTCATCAGCTCCCCTCAAACCATCCCTCTGCGTGATGGGCTGTaGCCTCCCTCCGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: SNVLTDTSLLISSPQTIPLRDGL*PPSVET
Trigger: TGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAG...AGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCCTGCGTGATGGGCTGTaGCCTCCCTCCGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSLRDGL*PPSVET
Trigger: TGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAG...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCAAGCCAGTGAGTCAATaGAGACTTCGTGATGACCAC +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCIKPVSQ*RLRDDH
Trigger: GTGGTCATCACGAAGTCTTCATTGACTCACTGGCTT...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGGGGGACAAATGTAATTaGGGTTTTGCTGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLGDKCN*GFAAPW
Trigger: CCAGGGAGCAGCAAAACCTCAATTACATTTGTCCCC...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCAGGCATTATGCTGGGTaGAAGAAGCCTGTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCIRHYAG*KKPVSE
Trigger: TTCTGAGACAGGCTTCTTTCACCCAGCATAATGCCT...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGCCAGCGTTGCTGGGATaGTACGTCCATTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWPALLG*YVHSFP
Trigger: TGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGG...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAGCAGCAATAGGGGACTaGGGTAGGATTTCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEAAIGD*GRISEL
Trigger: CAACTCTGAAATCCTACCGCAGTCCCCTATTGCTGC...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATACATGACAGCTCCCTGTaGTTTCACTCTCAACATTCA +
Preference number: 4 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIHDSSL*FHSQHS
Trigger: TGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATG...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCAGTGAGTCTCGGTGCTaGGACAGAGAGCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFSESRC*DRELPL
Trigger: GAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACT...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTTTGCTGAGTTGAACTaGTTTGAGAAAAGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVFAELN*FEKRQG
Trigger: CCCTTGCCTTTTCTCAAACCAGTTCAACTCAGCAAA...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAGGTTTTGCTGCTCCCTaGAACTTGGTCCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEGFAAP*NLVQKV
Trigger: AACCTTCTGGACCAAGTTCCAGGGAGCAGCAAAACC...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCATAGAGTGCCAGCTCTaGGCATGGGGAAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFIECQL*AWGRQH
Trigger: ATGCTGCCTTCCCCATGCCCAGAGCTGGCACTCTAT...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCATCTTGATGAGCTATTaGCCAGGGGTGCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCIILMSY*PGVLWK
Trigger: CTTCCAAAGCACCCCTGGCCAATAGCTCATCAAGAT...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCAAGAATGACCAACAGTaGGACCAGTCACTCAGGGTA +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCIKNDQQ*DQSLRV
Trigger: TACCCTGAGTGACTGGTCCCACTGTTGGTCATTCTT...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGTGCCAGGAGTTGGGGTaGGGAAGGGTGTGTTATAAA +
Preference number: 4 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLCQELG*GRVCYK
Trigger: TTTATAACACACCCTTCCCCACCCCAACTCCTGGCA...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 72 bp TGTTGGACGGCTGTCCTCAGGCTACAGGAACATGCTTaGACTGCATTGCAGGCTGGAAGCACCTGGAAATTT +
Preference number: 4 (lower is better)
Translates to: CWTAVLRLQEHA*TALQAGSTWKF
Trigger: AAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCCTGTAGCCTGAGGACAGCCGTCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCAGATTCCTTGTTGACTaGGACAAGTTGATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCIRFLVD*DKLISW
Trigger: CCAGGAGATCAACTTGTCTCAGTCAACAAGGAATCT...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATACTTAATGTTGAGGCTTaGGGTCCATATTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFILNVEA*GPYSPE
Trigger: TTCAGGAGAATATGGACCTCAAGCCTCAACATTAAG...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAACAGCAGTTAATGGATaGGGTGTCTCTTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTETAVNG*GVSCQW
Trigger: CCACTGACAAGAGACACCTCATCCATTAACTGCTGT...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGGTCACGGAAGCTTTATaGAGAGGGAATCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLVTEAL*RGNLRE
Trigger: CTCTCTCAGATTCCCTCTTCATAAAGCTTCCGTGAC...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTCCAATGATACTGCTCTaGGATAAGTTGACATCCATA +
Preference number: 4 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVPMILL*DKLTSI
Trigger: TATGGATGTCAACTTATCTCAGAGCAGTATCATTGG...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCTTACCTACAGTTGAGTaGGCTCCCTCCACAAGAAAA +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCILPTVE*APSTRK
Trigger: TTTTCTTGTGGAGGGAGCTCACTCAACTGTAGGTAA...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCACAATCACAGTGTCCTaGGTGATGGGCTGTGACCTC +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFTITVS*VMGCDL
Trigger: GAGGTCACAGCCCATCACGCAGGACACTGTGATTGT...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATGAGGGTCGTATTTaGACTGGAAAAGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVYEGRI*TGKGFL
Trigger: CAAGAATCCTTTTCCAGTGCAAATACGACCCTCATA...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAATCTAGAAGTAGAAGGTaGTCCAGCAGGGGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTESRSRR*SSRGFG
Trigger: TCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGA...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCGGCTTTCCCGTAATCTaGCAACCCGGCCTCCGTAGC +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSGFPVI*QPGLRS
Trigger: GCTACGGAGGCCGGGTTGCCAGATTACGGGAAAGCC...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATACAGGAACTTCTTAAATaGCTTTCCCGTAATCTGGCA +
Preference number: 4 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIQELLK*LSRNLA
Trigger: TGCCAGATTACGGGAAAGCCATTTAAGAAGTTCCTG...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTAGCAAAACAAGTTTCTaGCAACCTGGACAAAATCTC +
Preference number: 4 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVSKTSF*QPGQNL
Trigger: GAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCT...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp GTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTTCTGCACAGCAGTGCTaGGAGCTGCTCGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: VSSQNWMLCVSAHIIHVASAQQC*ELLDLG
Trigger: GCCCAAGTCGAGCAGCTCCCAGCACTGCTGTGCAGA...AGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAGCAACTCTCTTGAGGTaGAAGTTCTTGCTCTACCAC +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEATLLR*KFLLYH
Trigger: GTGGTAGAGCAAGAACTTCCACCTCAAGAGAGTTGC...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAATTAATATACCAGACCTaGTCATCGCCCACATGGGCT +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTELIYQT*SSPTWA
Trigger: AGCCCATGTGGGCGATGACCAGGTCTGGTATATTAA...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTAATGGGTCTGGGGTTTaGCTAGGCTTTGTAAATTTT +
Preference number: 4 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVNGSGV*LGFVNF
Trigger: AAAATTTACAAAGCCTAGCCAAACCCCAGACCCATT...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCCGGATTTTTGTCTTATaGATGCTATCTCCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCIRIFVL*MLSPKQ
Trigger: CTGCTTGGGAGATAGCATTCATAAGACAAAAATCCG...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATAGACAGATTTTCTGGCTaGATGTTGTCGGATTTTTGT +
Preference number: 4 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIDRFSG*MLSDFC
Trigger: ACAAAAATCCGACAACATTCAGCCAGAAAATCTGTC...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCCATCTCTTTCACACTTaGGCCTTTCCATTTCATCTG +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCIHLFHT*AFPFHL
Trigger: CAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATG...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp TATGGGGGAAGGGGGACTGCTCATGGAATCAGAAGACTTAGGAGTGAGTCTCGGAAAAACACGAGCTGCTaGAAGAAGTCTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: YGGRGTAHGIRRLRSESRKNTSC*KKSAET
Trigger: TGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTT...CCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp TATGGGGGAAGGGGGACTGCTCATGGAATCAGAAGACTTAGGAGTGAGTCTCGGTTAGCACAGTGCTTGTaGCATTGTTGGTGCTCAATA +
Preference number: 4 (lower is better)
Translates to: YGGRGTAHGIRRLRSESRLAQCL*HCWCSI
Trigger: TATTGAGCACCAACAATGTCACAAGCACTGTGCTAA...CCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCGAGTTAGTCACTACTTaGCTTCCCTCTATACAGCAA +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCIELVTT*LPSIQQ
Trigger: TTGCTGTATAGAGGGAAGTCAAGTAGTGACTAACTC...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGAGATTTAGCTTCTGGTaGGGGCTTGCTCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWRFSFW*GLALCF
Trigger: GAAGCAGAGAGCAAGCCCTCACCAGAAGCTAAATCT...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGAGTCTTTCTCTGTCATaGAACTTGGCCCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWSLSLS*NLALPR
Trigger: TCTGGGGAGGGCCAAGTTTCATGACAGAGAAAGACT...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AGGTCCAGGATCTTTGACAATGGCAAGATAAAGACGGTAAACTTAGATGTCCTGTGTGTAGGTGCAGGGTaGCCTACCTGTCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: RSRIFDNGKIKTVNLDVLCVGAG*PTCPGL
Trigger: CAAGCCAGGACAGGTAGGTCACCCTGCACCTACACA...CAGGACATCTAAGTTTACCGTCTTTATCTTGCCATTGTCAAAGATCCTGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATAAACAAATCTCATTGCTaGCACAGCTTTCTGGGAATT +
Preference number: 4 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFINKSHC*HSFLGI
Trigger: AATTCCCAGAAAGCTGTGTCAGCAATGAGATTTGTT...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAACATTTCCAGTTTCTCTaGCTTAAAGCGAACAGAGGG +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEHFQFL*LKANRG
Trigger: CCCTCTGTTCGCTTTAAGGCAGAGAAACTGGAAATG...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAGATGTTATGCGTCTCTaGTCACATCATCCATGTAGC +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEDVMRL*SHHPCS
Trigger: GCTACATGGATGATGTGAGCAGAGACGCATAACATC...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGGCAAATTTCACATTTTaGCTGGCATGTAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TTVTENRAVIARSWGGEGANFTF*LACSRC
Trigger: GCACCTGCTACATGCCAGGCAAAATGTGAAATTTGC...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp GTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTCTACCTGTCCTGGCTTaGCCAGAGCTGAGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: VSSQNWMLCVSAHIIHVALPVLA*PELREF
Trigger: GAACTCCCTCAGCTCTGGGCAAGCCAGGACAGGTAG...AGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAGACAAGTTGATCTCCTaGCTTCAAACGACCATCCTT +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEDKLIS*LQTTIL
Trigger: AAGGATGGTCGTTTGAAGCCAGGAGATCAACTTGTC...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATTTGTTTTGGGAGTaGATGAGGTCTTTGGGATTA +
Preference number: 4 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVYLFWE*MRSLGL
Trigger: TAATCCCAAAGACCTCATCCACTCCCAAAACAAATA...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATAGGTGTTGTTCCTTTGTaGGCTGAATACCAAGATAAT +
Preference number: 4 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIGVVPL*AEYQDN
Trigger: ATTATCTTGGTATTCAGCCCACAAAGGAACAACACC...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGCCTTCTGAATCTCTGTaGAATGCACAGCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWPSESL*NAQLWS
Trigger: GCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGG...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAATTTCACATTTTGCCTaGCATGTAGCAGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEISHFA*HVAGAQ
Trigger: CTGAGCACCTGCTACATGCCAGGCAAAATGTGAAAT...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGTCTCTGCTTCAAAGATaGCAACTTCTTGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: TTVTENRAVIARSWGGEGSLLQR*QLLAAS
Trigger: GGATGCAGCAAGAAGTTGCCATCTTTGAAGCAGAGA...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTTCTACCACTCCTGAGTaGGAAGTGGGGTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVSTTPE*EVGLGR
Trigger: CCTGCCCAACCCCACTTCCCACTCAGGAGTGGTAGA...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AATGGAATGGGGGACAGAACTATTGATCTGATCGCCCTTTCCCTCAGAACAGTCTGGTCATCGCCCACATaGGCTTGCACCTTTAAGATG +
Preference number: 4 (lower is better)
Translates to: NGMGDRTIDLIALSLRTVWSSPT*ACTFKM
Trigger: CATCTTAAAGGTGCAAGCCCATGTGGGCGATGACCA...GACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAATCAAAGGCATTATGCTaGGTGAAAGAAGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTESKALC*VKEACL
Trigger: GAGACAGGCTTCTTTCACCCAGCATAATGCCTTTGA...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 72 bp CACAGAAATCAATCTAATCCTCCAATGTTGACCACATaGGGCTGGAGGAAGCTCACTGGCGTTGTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: HRNQSNPPMLTT*GWRKLTGVVQG
Trigger: ACCTTGGACAACGCCAGTGAGCTTCCTCCAGCCCAATGTGGTCAACATTGGAGGATTAGATTGATTTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 72 bp ATCAAGATGCCAGCAGATTTAGCTTCTGGTGAGGGCTaGCTCTCTGCTTCAAAGATGGCAACTTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IKMPADLASGEG*LSASKMATSCC
Trigger: GCAGCAAGAAGTTGCCATCTTTGAAGCAGAGAGCAAGCCCTCACCAGAAGCTAAATCTGCTGGCATCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCGCAGCTTCAGCAAGATaGATCCGACTACGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSAASAR*IRLRRA
Trigger: AGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGC...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATAAAAAACCATTGTATCTaGGACCCTATGAAGAACTAC +
Preference number: 4 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIKNHCI*DPMKNY
Trigger: GTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTT...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAAAAAACACGAGCTGCTaGAAGAAGTCTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEKNTSC*KKSAET
Trigger: TGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTT...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp AGTAATGTTTTAACAGATACCTCTCTTCTCATCAGCTCCCCTCAAACCATCCCTGCTCTCCCGTGGGAGTaGACCAAAGTCATCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SNVLTDTSLLISSPQTIPALPWE*TKVISR
Trigger: TCTGGAGATGACTTTGGTTCACTCCCACGGGAGAGC...AGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCCCAGCGTTGCTGGGATaGTACGTCCATTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSPALLG*YVHSFP
Trigger: TGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGG...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCTTCCTCTCTCTGAACTaGTATTTCCCTACTGAAAAC +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCIFLSLN*YFPTEN
Trigger: GTTTTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAA...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTAGGAGTGAGTCTCGGTaGTGGGACAGAGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TQSPESPFHTSTSSACFTRSESR*WDRELP
Trigger: AGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCT...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp GTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCCTATTTTGGCGAAGGCTTGGGTaGAGAGAAGGGGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: VQSLHFTLQQVVHALLLFWRRLG*REGGRV
Trigger: AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCA...AAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAGGTTGTCTTTGCCTGTaGATGCATGAATTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEGCLCL*MHEFGC
Trigger: ACAACCAAATTCATGCATGCACAGGCAAAGACAACC...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCAGTCCTTGTGTAGGTaGAGGGTGACCTACCTGTCC +
Preference number: 4 (lower is better)
Translates to: TQSPESPFHTSTSSACFTQSLCR*RVTYLS
Trigger: GGACAGGTAGGTCACCCTGCACCTACACAAGGACTG...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTAAGCGCCAGCGTTGCTaGGATGCTACGTCCATTCCT +
Preference number: 4 (lower is better)
Translates to: TQSPESPFHTSTSSACFTKRQRC*DATSIP
Trigger: AGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTT...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGACACTCATCACGGGATaGATCCAGGATGTAGTCTGT +
Preference number: 4 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWTLITG*IQDVVC
Trigger: ACAGACTACATCCTGGATCCATCCCGTGATGAGTGT...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCGTTTCATCTCAGAATTaGATGTTATGCGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCIVSSQN*MLCVSA
Trigger: AGCAGAGACGCATAACATCCAATTCTGAGATGAAAC...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp TATGGGGGAAGGGGGACTGCTCATGGAATCAGAAGACTTAGGAGTGAGTCTCGGGTTTCATCTCAGAATTaGATGTTATGCGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: YGGRGTAHGIRRLRSESRVSSQN*MLCVSA
Trigger: AGCAGAGACGCATAACATCCAATTCTGAGATGAAAC...CCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp GTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTAGTGAGTCTCGGTGCTaGGACAGAGAGCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VSSQNWMLCVSAHIIHVASESRC*DRELPL
Trigger: GAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACT...AGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp AAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTAAGAGTGCGCCTACTTaGCGAAGGCTTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: KTKNKHTHQISFTGMLYGKSAPT*RRLGCR
Trigger: TCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTT...ACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCGGAAATAGCTCCCTCTaGGGCTTCTCTCAAAACTTG +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFGNSSL*GFSQNL
Trigger: CAAGTTTTGAGAGAAGCCCCAGAGGGAGCTATTTCC...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACGGTTCTTGGACTTGGTaGAAGGAAGGTTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHGSWTW*KEGYSS
Trigger: GGAAGAATAACCTTCCTTCCACCAAGTCCAAGAACC...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCGATGGGGGAATGGAATaGGGGACAGAACTATTGATC +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFDGGME*GTELLI
Trigger: GATCAATAGTTCTGTCCCCCATTCCATTCCCCCATC...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AGTAATGTTTTAACAGATACCTCTCTTCTCATCAGCTCCCCTCAAACCATCCCTCCTGCACCTCTTTGTTaGACGGCTGTCCTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: SNVLTDTSLLISSPQTIPPAPLC*TAVLRL
Trigger: TAGCCTGAGGACAGCCGTCCAACAAAGAGGTGCAGG...AGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCCTCTGTCATGAAACTTaGCCCTCCCCAGACAATGAA +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFLCHET*PSPDNE
Trigger: TTCATTGTCTGGGGAGGGCCAAGTTTCATGACAGAG...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGTATGGCAGTGAACCTTaGCTACACATTGAAATCACC +
Preference number: 4 (lower is better)
Translates to: TTVTENRAVIARSWGGEGYGSEP*LHIEIT
Trigger: GGTGATTTCAATGTGTAGCCAAGGTTCACTGCCATA...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCCACAGTACTGTTTTCTaGAGTAATTGGAATCTGTAC +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCIHSTVF*SNWNLY
Trigger: GTACAGATTCCAATTACTTCAGAAAACAGTACTGTG...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAACATTTCATCTGCTTCTaGAGAATCACAAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEHFICF*RITRKK
Trigger: CTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATG...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTTCCTTCCCAGTGGTGTaGGGGAAGTCTGAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: TQSPESPFHTSTSSACFTSFPVV*GKSEKL
Trigger: TAGCTTCTCAGACTTCCCTCACACCACTGGGAAGGA...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp TATGGGGGAAGGGGGACTGCTCATGGAATCAGAAGACTTAGGAGTGAGTCTCGGCTGAAAGAAGTCTGCTaGAACAATATCACAAAGAGT +
Preference number: 4 (lower is better)
Translates to: YGGRGTAHGIRRLRSESRLKEVC*NNITKS
Trigger: ACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAG...CCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCAATATTTTGAGGGAATaGGTGAGTAAGGATGAGTCA +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCINILRE*VSKDES
Trigger: TGACTCATCCTTACTCACTCATTCCCTCAAAATATT...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTGGGGGACAGAACTATTaGTCTGATCGCCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: KTKNKHTHQISFTGMLYGGGQNY*SDRPFP
Trigger: AGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCC...ACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTGGCCAGCAACTCTCTTaGGGTGGAAGTTCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLGQQLS*GGSSCS
Trigger: AGAGCAAGAACTTCCACCTCAAGAGAGTTGCTGGCC...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGACCTTGGCTACACATTaGAATCACCTAGAATCCTTA +
Preference number: 4 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLTLATH*NHLESL
Trigger: TAAGGATTCTAGGTGATTTCAATGTGTAGCCAAGGT...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACATGACTTTCAGTGGGTaGATGGCTAAAGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHMTFSG*MAKETV
Trigger: CACAGTTTCTTTAGCCATTCACCCACTGAAAGTCAT...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGCATTTCCAGTTTCTCTaGCTTAAAGCGAACAGAGGG +
Preference number: 4 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWHFQFL*LKANRG
Trigger: CCCTCTGTTCGCTTTAAGGCAGAGAAACTGGAAATG...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTTTCAAGCGCCAGCGTTaGTGGGATGCTACGTCCATT +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVFKRQR*WDATSI
Trigger: AATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAA...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp GTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTTTCAAGCGCCAGCGTTaGTGGGATGCTACGTCCATT +
Preference number: 4 (lower is better)
Translates to: VSSQNWMLCVSAHIIHVAFKRQR*WDATSI
Trigger: AATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAA...AGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTTGGGGGAAGGGGGACTaGTCATGGAATCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVWGKGD*SWNQKT
Trigger: AGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCA...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGTCCTTAAAACACAGGTaGCAGGGTCCTATTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWSLKHR*QGPILR
Trigger: TCTGAGAATAGGACCCTGGCACCTGTGTTTTAAGGA...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TATGGGGGAAGGGGGACTGCTCATGGAATCAGAAGACTTAGGAGTGAGTCTCGGCTGAATATATACCAATaGGCCTTCATTCCGGTTAAT +
Preference number: 4 (lower is better)
Translates to: YGGRGTAHGIRRLRSESRLNIYQ*AFIPVN
Trigger: ATTAACCGGAATGAAGGCCCATTGGTATATATTCAG...CCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCGACAAGTTGATCTCCTaGCTTCAAACGACCATCCTT +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFDKLIS*LQTTIL
Trigger: AAGGATGGTCGTTTGAAGCCAGGAGATCAACTTGTC...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTTGCTGTCTCAGGGCTTaGTGTTGTTCCTTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLCCLRA*CCSFVG
Trigger: GCCCACAAAGGAACAACACCAAGCCCTGAGACAGCA...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TATGGGGGAAGGGGGACTGCTCATGGAATCAGAAGACTTAGGAGTGAGTCTCGGCTTCAACTACAGCTTTaGCTTCTTGTTTCACATTCT +
Preference number: 4 (lower is better)
Translates to: YGGRGTAHGIRRLRSESRLQLQL*LLVSHS
Trigger: AGAATGTGAAACAAGAAGCCAAAGCTGTAGTTGAAG...CCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTCTCAAACCATCCCTCTaGGAAGGGCAACCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVLKPSL*EGQPKQ
Trigger: CTGCTTAGGTTGCCCTTCCCAGAGGGATGGTTTGAG...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGGAGCTGCTCGACTTaGGCTTTAGGCTTCCATCTT +
Preference number: 4 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYGSCST*ALGFHL
Trigger: AAGATGGAAGCCTAAAGCCCAAGTCGAGCAGCTCCC...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCGATATAGAGAATAATTaGGTGATGGGGGAATGGAAT +
Preference number: 4 (lower is better)
Translates to: KRCLLNLCGMHSCGASCIDIENN*VMGEWN
Trigger: ATTCCATTCCCCCATCACCCAATTATTCTCTATATC...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGAATTTCAGAGTTCTGTaGCAATACATAGCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLNFRVL*QYIAPL
Trigger: CAAGGGAGCTATGTATTGCCACAGAACTCTGAAATT...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCTACCATGATGGGGTATaGTCAAAACGGACTGGAATC +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFYHDGV*SKRTGI
Trigger: GATTCCAGTCCGTTTTGACCATACCCCATCATGGTA...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 72 bp GGTGTCTCTTGTCAGTGGGCTGTGTGCCTGAGTACTTaGATTTCAGTGACTCAAGCACCTTCTTTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: GVSCQWAVCLST*ISVTQAPSLFC
Trigger: GCAAAACAAAGAAGGTGCTTGAGTCACTGAAATCAAAGTACTCAGGCACACAGCCCACTGACAAGAGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 72 bp CCAGGACAGGCTATGGCAGTGAACCTTGGCTACACATaGAAATCACCTAGAATCCTTAAAACACAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PGQAMAVNLGYT*KSPRILKTQVP
Trigger: TGGCACCTGTGTTTTAAGGATTCTAGGTGATTTCAATGTGTAGCCAAGGTTCACTGCCATAGCCTGTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TCCAAAGGAGGACAGTTCTGGATTGGGGGATGTATTAGTTTGCTAAGACTGCCATTGACTGAGACAAGTTaGTCTCCTGGCTTCAAACGA +
Preference number: 4 (lower is better)
Translates to: SKGGQFWIGGCISLLRLPLTETS*SPGFKR
Trigger: TCGTTTGAAGCCAGGAGATCAACTTGTCTCAGTCAA...TGGCAGTCTTAGCAAACTAATACATCCCCCAATCCAGAACTGTCCTCCTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGGCAGCTTCAGCAAGATaGATCCGACTACGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TFRFSNPKIQASESMKTSAASAR*IRLRRA
Trigger: AGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGC...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp GTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTGGTGTGAGGGAAGTCTaGGAAGCTAACACAGCTCTT +
Preference number: 4 (lower is better)
Translates to: VSSQNWMLCVSAHIIHVAGVREV*EANTAL
Trigger: AAGAGCTGTGTTAGCTTCTCAGACTTCCCTCACACC...AGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCCGAAGAGGTGCCTTCTaGATCTCTGTGGAATGCACA +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSRRGAF*ISVECT
Trigger: TGTGCATTCCACAGAGATTCAGAAGGCACCTCTTCG...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp AATGGAATGGGGGACAGAACTATTGATCTGATCGCCCTTTCCCTCAGAACAGTCTTATTGCTACTCCTGTaGTCCTTTTGGGTTCACAGA +
Preference number: 4 (lower is better)
Translates to: NGMGDRTIDLIALSLRTVLLLLL*SFWVHR
Trigger: TCTGTGAACCCAAAAGGATCACAGGAGTAGCAATAA...GACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AGGTCCAGGATCTTTGACAATGGCAAGATAAAGACGGTAAACTTAGATGTCCTGGGCAAACAGGTTCCCTaGAGCCTCTTTCATAAGGGT +
Preference number: 4 (lower is better)
Translates to: RSRIFDNGKIKTVNLDVLGKQVP*SLFHKG
Trigger: ACCCTTATGAAAGAGGCTTCAGGGAACCTGTTTGCC...CAGGACATCTAAGTTTACCGTCTTTATCTTGCCATTGTCAAAGATCCTGGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAAGAAAACAGTATATCTaGGCAACTGTTGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTERKQYI*ATVGDK
Trigger: CTTATCACCAACAGTTGCTCAGATATACTGTTTTCT...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGTGGAACAGCCACAGTaGGAGAGACCACTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYVEQPQ*ERPLSF
Trigger: AAAGCTAAGTGGTCTCTCTCACTGTGGCTGTTCCAC...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCCTTCCCACCTCCACCTaGTTTACTCACCTAGCTACT +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSLPTST*FTHLAT
Trigger: AGTAGCTAGGTGAGTAAATCAGGTGGAGGTGGGAAG...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCACTGCGATCATACTGTaGGTTTTATGGCCCAACTTA +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFTAIIL*VLWPNL
Trigger: TAAGTTGGGCCATAAAACTCACAGTATGATCGCAGT...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGGTTCTTTCCATGATATaGCTGGACTGTTACTTCTTT +
Preference number: 4 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLVLSMI*LDCYFF
Trigger: AAAGAAGTAACAGTCCAGTCATATCATGGAAAGAAC...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCCCCCCATTCAATAACTaGTGGTGCAGAGGTATAAAT +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFPPFNN*WCRGIN
Trigger: ATTTATACCTCTGCACCATCAGTTATTGAATGGGGG...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTTACCACTCTCATGCATaGCAGCTCCCTGTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVYHSHA*QLPVLS
Trigger: TGAAAGCACAGGGAGCTGTCATGCATGAGAGTGGTA...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TCCAAAGGAGGACAGTTCTGGATTGGGGGATGTATTAGTTTGCTAAGACTGCCAATTCAGAGGCACACCTaGTGTTTTGTGGTAGAGTTC +
Preference number: 4 (lower is better)
Translates to: SKGGQFWIGGCISLLRLPIQRHT*CFVVEF
Trigger: GAACTCTACCACAAAACATCAGGTGTGCCTCTGAAT...TGGCAGTCTTAGCAAACTAATACATCCCCCAATCCAGAACTGTCCTCCTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTGAGTCTGCTTGTACTTaGTGTCTCAGGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVESACT*CLRAWC
Trigger: ACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTC...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTAGCTGTGGAGCCAGCTaGATCAACACAATCACAGTG +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVSCGAS*INTITV
Trigger: CACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCT...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp AATGGAATGGGGGACAGAACTATTGATCTGATCGCCCTTTCCCTCAGAACAGTCTGTCCAAGGTCCCACTaGCTAAACATACCACATAAT +
Preference number: 4 (lower is better)
Translates to: NGMGDRTIDLIALSLRTVCPRSH*LNIPHN
Trigger: ATTATGTGGTATGTTTAGGCAGTGGGACCTTGGACA...GACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp AATGGAATGGGGGACAGAACTATTGATCTGATCGCCCTTTCCCTCAGAACAGTCAGGAGAGATGACACATaGCCTACTTTCCTATCCAAA +
Preference number: 4 (lower is better)
Translates to: NGMGDRTIDLIALSLRTVRRDDT*PTFLSK
Trigger: TTTGGATAGGAAAGTAGGGCATGTGTCATCTCTCCT...GACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp GTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTCAGGCTACAGGAACATaGTTTGACTGCATTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VSSQNWMLCVSAHIIHVAQATGT*FDCIAG
Trigger: GCCTGCAATGCAGTCAAAGCATGTTCCTGTAGCCTG...AGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCGCACCTTTAAGATGGTaGCACTTGGAAGTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFAPLRW*HLEVCS
Trigger: AGAACAAACTTCCAAGTGGCACCATCTTAAAGGTGC...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGCTGAATATATACCAATaGGCCTTCATTCCGGTTAAT +
Preference number: 4 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLLNIYQ*AFIPVN
Trigger: ATTAACCGGAATGAAGGCCCATTGGTATATATTCAG...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp GTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCCTATTTTGCTGTCTCAGGGCTTaGTGTTGTTCCTTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: VQSLHFTLQQVVHALLLFCCLRA*CCSFVG
Trigger: GCCCACAAAGGAACAACACCAAGCCCTGAGACAGCA...AAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp AGGTCCAGGATCTTTGACAATGGCAAGATAAAGACGGTAAACTTAGATGTCCTGTCCATTCCTTCCCAGTaGTGTGAGGGAAGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: RSRIFDNGKIKTVNLDVLSIPSQ*CEGSLR
Trigger: TCTCAGACTTCCCTCACACCACTGGGAAGGAATGGA...CAGGACATCTAAGTTTACCGTCTTTATCTTGCCATTGTCAAAGATCCTGGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTCCTTCTGAATCTCTGTaGAATGCACAGCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVPSESL*NAQLWS
Trigger: GCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGG...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGTTCCTAACATTCAAATaGCTGTCAGGCAAAACACAA +
Preference number: 4 (lower is better)
Translates to: TTVTENRAVIARSWGGEGFLTFK*LSGKTQ
Trigger: TTGTGTTTTGCCTGACAGCCATTTGAATGTTAGGAA...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTTACCTCATTCACCTCTaGGGGGTGCAAGGAAATAGC +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVYLIHL*GVQGNS
Trigger: GCTATTTCCTTGCACCCCCCAGAGGTGAATGAGGTA...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTGGGAATCTGAGAGAGTaGCCAACTGGTTCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: KTKNKHTHQISFTGMLYGGNLRE*PTGSVH
Trigger: ATGGACTGAACCAGTTGGCCACTCTCTCAGATTCCC...ACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTTGGGTGATGGGGGAATaGAATGGGGGACAGAACTAT +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVWVMGE*NGGQNY
Trigger: ATAGTTCTGTCCCCCATTCCATTCCCCCATCACCCA...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGAATCTGATGCAGGAATaGGGCAAGAGAAGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWNLMQE*GKRSFL
Trigger: TAGGAAACTTCTCTTGCCCCATTCCTGCATCAGATT...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TCCAAAGGAGGACAGTTCTGGATTGGGGGATGTATTAGTTTGCTAAGACTGCCAAACAACAGACCATCCTaGCCAGTATTCTGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: SKGGQFWIGGCISLLRLPNNRPS*PVFCFP
Trigger: GGGAAAACAGAATACTGGCCAGGATGGTCTGTTGTT...TGGCAGTCTTAGCAAACTAATACATCCCCCAATCCAGAACTGTCCTCCTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGATTTCTTCAGAACCTTaGGCAAATCAACAATGTGTG +
Preference number: 4 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLISSEP*ANQQCV
Trigger: CACACATTGTTGATTTGCCCAAGGTTCTGAAGAAAT...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCAAACGGACTGGAATCTaGCCTAGGCTTCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSKRTGI*PRLQWG
Trigger: TCCCCATTGAAGCCTAGGCCAGATTCCAGTCCGTTT...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCAAAGGAGGACAGTTCTaGATTGGGGGATGTATTAGT +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFKGGQF*IGGCIS
Trigger: ACTAATACATCCCCCAATCCAGAACTGTCCTCCTTT...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 72 bp TTTTGGGTTCACAGAAATCAATCTAATCCTCCAATGTaGACCACATTGGGCTGGAGGAAGCTCACTGGCGTT +
Preference number: 4 (lower is better)
Translates to: FWVHRNQSNPPM*TTLGWRKLTGV
Trigger: AACGCCAGTGAGCTTCCTCCAGCCCAATGTGGTCAACATTGGAGGATTAGATTGATTTCTGTGAACCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACCACAGTACTGTTTTCTaGAGTAATTGGAATCTGTAC +
Preference number: 4 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHHSTVF*SNWNLY
Trigger: GTACAGATTCCAATTACTTCAGAAAACAGTACTGTG...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTAGAGCTTCCTCTCTCTaGACTGCTATTTCCCTACTG +
Preference number: 4 (lower is better)
Translates to: KTKNKHTHQISFTGMLYGRASSL*TAISLL
Trigger: CAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCT...ACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCGTGGAACCCAGGAAATaGTTAGCAATTGTTCTACTT +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFVEPRK*LAIVLL
Trigger: AAGTAGAACAATTGCTAATCATTTCCTGGGTTCCAC...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTGCTACCTCTGGAAAGTaGGACAGGCTATCTCTTACT +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVATSGK*DRLSLT
Trigger: AGTAAGAGATAGCCTGTCTCACTTTCCAGAGGTAGC...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCGTGTCTTACAATAATTaGTGTCCTGCAGTTACTGTC +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFVSYNN*CPAVTV
Trigger: GACAGTAACTGCAGGACATCAATTATTGTAAGACAC...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATAAGGAGCAAGGTACATaGGGGAGTTTGCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYKEQGT*GSLHCP
Trigger: TGGACAATGCAAACTCCCTCATGTACCTTGCTCCTT...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGAATCAATTTAGTTATTaGCAATGCAGGTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWNQFSY*QCRSGL
Trigger: GAGGCCTGACCTGCATTGTCAATAACTAAATTGATT...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACTCCAATCCTAGAGAATaGATGTATCACATACATGGT +
Preference number: 4 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHSNPRE*MYHIHG
Trigger: ACCATGTATGTGATACATTCATTCTCTAGGATTGGA...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTGGTAGGTGGGTCATTTaGGCCCAGGTGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFGRWVI*AQVFET
Trigger: GGTCTCAAACACCTGGGCTCAAATGACCCACCTACC...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR GCA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTCATTTCCATTCCATGTaGCTGTCTCTGAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLHFHSM*LSLSSF
Trigger: GAAGCTGCTCAGAGACAGGCACATGGAATGGAAATG...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCCATTTCCATTCCATGTaGCTGTCTCTGAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSHFHSM*LSLSSF
Trigger: GAAGCTGCTCAGAGACAGGCACATGGAATGGAAATG...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp AAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTCAATATCACAAAGAGTaGGCCTACTTGGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KTKNKHTHQISFTGMLYGQYHKE*AYLAKA
Trigger: AGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTG...ACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp GTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTGATGTCCTGCAGGACTaGTCAACCAATGATACTGCT +
Preference number: 4 (lower is better)
Translates to: VSSQNWMLCVSAHIIHVADVLQD*STNDTA
Trigger: AGCAGTATCATTGGTTGAGCAGTCCTGCAGGACATC...AGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp GTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTGCTATTGGCCAGGGGTaGTTTGGAAGGATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: VSSQNWMLCVSAHIIHVAAIGQG*FGRILS
Trigger: TGAAAGAATCCTTCCAAAGCACCCCTGGCCAATAGC...AGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp AATGGAATGGGGGACAGAACTATTGATCTGATCGCCCTTTCCCTCAGAACAGTCCAGGTGTTTCTAATGTaGTACCAAGAGCCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: NGMGDRTIDLIALSLRTVQVFLM*YQEPLN
Trigger: ATTAAGAGGCTCTTGGTAGCACATTAGAAACACCTG...GACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AATGGAATGGGGGACAGAACTATTGATCTGATCGCCCTTTCCCTCAGAACAGTCAAGTTTCTGGCAACCTaGACAAAATCTCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: NGMGDRTIDLIALSLRTVKFLAT*TKSPKD
Trigger: GTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTT...GACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAGTTTCCATTTTCTCCTaGGGAATTCTTTTCTTATCA +
Preference number: 4 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEVSIFS*GILFLS
Trigger: TGATAAGAAAAGAATTCCCCAGGAGAAAATGGAAAC...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGGGAATAGGGAATAAATaGATCCTGAGCAACATTAAT +
Preference number: 4 (lower is better)
Translates to: TTVTENRAVIARSWGGEGGIGNK*ILSNIN
Trigger: ATTAATGTTGCTCAGGATCCATTTATTCCCTATTCC...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATTGGGGACAGGTGTGGTaGAGAAGGAAGAAGCTATAT +
Preference number: 4 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYWGQVW*RRKKLY
Trigger: ATATAGCTTCTTCCTTCTCCACCACACCTGTCCCCA...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp GTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTGCTACTGATGTTGAGTaGAACAGCCACAGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: VSSQNWMLCVSAHIIHVAATDVE*NSHSER
Trigger: TCTCTCACTGTGGCTGTTCCACTCAACATCAGTAGC...AGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTTTGACTGAGACAAGTTaGTCTCCTGGCTTCAAACGA +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVLTETS*SPGFKR
Trigger: TCGTTTGAAGCCAGGAGATCAACTTGTCTCAGTCAA...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGGGTGTGAGGGAAGTCTaGGAAGCTAACACAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TFRFSNPKIQASESMKTSGVREV*EANTAL
Trigger: AAGAGCTGTGTTAGCTTCTCAGACTTCCCTCACACC...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCAAAAACCATTGTATCTaGGACCCTATGAAGAACTAC +
Preference number: 4 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFKNHCI*DPMKNY
Trigger: GTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTT...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AGTAATGTTTTAACAGATACCTCTCTTCTCATCAGCTCCCCTCAAACCATCCCTATCACAGATCTGCCTTaGACCCTAGCTTCTACACAT +
Preference number: 4 (lower is better)
Translates to: SNVLTDTSLLISSPQTIPITDLP*TLASTH
Trigger: ATGTGTAGAAGCTAGGGTTCAAGGCAGATCTGTGAT...AGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTCGCCAAAACATAATATaGGGGTCGTATTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLRQNII*GSYLHW
Trigger: CCAGTGCAAATACGACCCTCATATTATGTTTTGGCG...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTACAGAACTATTGATCTaGTCGCCCTTTCCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVTELLI*SPFPSE
Trigger: TTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGT...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTGGACTGCTCAACCAATaGTACTGCTCTGAGATAAGT +
Preference number: 4 (lower is better)
Translates to: KTKNKHTHQISFTGMLYGGLLNQ*YCSEIS
Trigger: ACTTATCTCAGAGCAGTATCATTGGTTGAGCAGTCC...ACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGGAGTCTGCTTGTACTTaGTGTCTCAGGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: TFRFSNPKIQASESMKTSESACT*CLRAWC
Trigger: ACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTC...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCGTACTTGATTCCATCTaGTGTGTAAGCTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSVLDSI*CVSFLP
Trigger: TGGGAGGAAGCTTACACAGCAGATGGAATCAAGTAC...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp GTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTGTACTTGATTCCATCTaGTGTGTAAGCTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: VSSQNWMLCVSAHIIHVAVLDSI*CVSFLP
Trigger: TGGGAGGAAGCTTACACAGCAGATGGAATCAAGTAC...AGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp GTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTGATGTTATGCGTCTCTaGTCACATCATCCATGTAGC +
Preference number: 4 (lower is better)
Translates to: VSSQNWMLCVSAHIIHVADVMRL*SHHPCS
Trigger: GCTACATGGATGATGTGAGCAGAGACGCATAACATC...AGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGAGCTGTGGAGCCAGCTaGATCAACACAATCACAGTG +
Preference number: 4 (lower is better)
Translates to: TFRFSNPKIQASESMKTSSCGAS*INTITV
Trigger: CACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCT...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTTGTCAGTGGGCTGTGTaGCTGAGTACTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: TQSPESPFHTSTSSACFTCQWAV*LSTLIS
Trigger: TGAAATCAAAGTACTCAGGCACACAGCCCACTGACA...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp AATGGAATGGGGGACAGAACTATTGATCTGATCGCCCTTTCCCTCAGAACAGTCGTAAGGAATTCAGATTaGTGGGATAGTGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: NGMGDRTIDLIALSLRTVVRNSD*WDSVSI
Trigger: AATGGAAACACTATCCCAGCAATCTGAATTCCTTAC...GACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCCCAGGTCCTTCTCTGTaGCCTACCAACATTTTTGTT +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSPGPSL*PTNIFV
Trigger: AACAAAAATGTTGGTAGGGCACAGAGAAGGACCTGG...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTTGCTGTCTCAGGGCTTaGTGTTGTTCCTTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFCCLRA*CCSFVG
Trigger: GCCCACAAAGGAACAACACCAAGCCCTGAGACAGCA...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CCA 90 bp TTTACTTCTTTCAAGGCATCATCTCTTTCACACTTGAGCCTTTCCATTTCATCTTGCTGTCTCAGGGCTTaGTGTTGTTCCTTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: FTSFKASSLSHLSLSISSCCLRA*CCSFVG
Trigger: GCCCACAAAGGAACAACACCAAGCCCTGAGACAGCA...AGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS-3UTR CCA 90 bp AATGGAATGGGGGACAGAACTATTGATCTGATCGCCCTTTCCCTCAGAACAGTCAGGAATTCAGATTGCTaGGATAGTGTTTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: NGMGDRTIDLIALSLRTVRNSDC*DSVSIF
Trigger: GAAAATGGAAACACTATCCCAGCAATCTGAATTCCT...GACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCGCTGACACAGCTTTCTaGGAATTTCCAATCCTAGAG +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSADTAF*EFPILE
Trigger: CTCTAGGATTGGAAATTCCCAGAAAGCTGTGTCAGC...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCATCTTTTCCCGTAATCTaGCAACCCGGCCTCCGTAGC +
Preference number: 4 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVASFPVI*QPGLRS
Trigger: GCTACGGAGGCCGGGTTGCCAGATTACGGGAAAAGA...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405898.5
3UTR CAA 72 bp GTCAATGAAGACTTCGTGATGACCACATTGCTACGGTaGATTGATGTTAAAGAAAGACTGGCTACTCGCCAA +
Preference number: 4 (lower is better)
Translates to: VNEDFVMTTLLR*IDVKERLATRQ
Trigger: TTGGCGAGTAGCCAGTCTTTCTTTAACATCAATCAACCGTAGCAATGTGGTCATCACGAAGTCTTCATTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 72 bp CTATTGGCCAGGGGTGCTTTGGAAGGATTCTTTCATTaGAAAGGTGGTTGGACTAGAGGAACTTACAAATTC +
Preference number: 4 (lower is better)
Translates to: LLARGALEGFFH*KGGWTRGTYKF
Trigger: GAATTTGTAAGTTCCTCTAGTCCAACCACCTTTCAAATGAAAGAATCCTTCCAAAGCACCCCTGGCCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 72 bp AAGCAAAATCTTGATGAGCTATTGGCCAGGGGTGCTTaGGAAGGATTCTTTCATTTGAAAGGTGGTTGGACT +
Preference number: 4 (lower is better)
Translates to: KQNLDELLARGA*EGFFHLKGGWT
Trigger: AGTCCAACCACCTTTCAAATGAAAGAATCCTTCCAAAGCACCCCTGGCCAATAGCTCATCAAGATTTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
3UTR CAA 72 bp TGGGCTTGCACCTTTAAGATGGTGCCACTTGGAAGTTaGTTCTTACTACTAACCCAGATGAGTCAAACCTTA +
Preference number: 4 (lower is better)
Translates to: WACTFKMVPLGS*FLLLTQMSQTL
Trigger: TAAGGTTTGACTCATCTGGGTTAGTAGTAAGAACAAACTTCCAAGTGGCACCATCTTAAAGGTGCAAGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCCTTAATGTTGAGGCTTaGGGTCCATATTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSLNVEA*GPYSPE
Trigger: TTCAGGAGAATATGGACCTCAAGCCTCAACATTAAG...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp TCCAAAGGAGGACAGTTCTGGATTGGGGGATGTATTAGTTTGCTAAGACTGCCACTGAAAGAAGTCTGCTaGAACAATATCACAAAGAGT +
Preference number: 4 (lower is better)
Translates to: SKGGQFWIGGCISLLRLPLKEVC*NNITKS
Trigger: ACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAG...TGGCAGTCTTAGCAAACTAATACATCCCCCAATCCAGAACTGTCCTCCTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCGGAATAAATGGATCCTaGGCAACATTAATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSGINGS*ATLISG
Trigger: GCCTGAGATTAATGTTGCTCAGGATCCATTTATTCC...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTGAGTCTGCTTGTACTTaGTGTCTCAGGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFESACT*CLRAWC
Trigger: ACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTC...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR GCA 90 bp TTAAGTGTATTTACTTCTTTCAAGGCATCATCTCTTTCACACTTGAGCCTTTCCGAGTCTGCTTGTACTTaGTGTCTCAGGGCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LSVFTSFKASSLSHLSLSESACT*CLRAWC
Trigger: ACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTC...GGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS-3UTR GCA 90 bp AATGGAATGGGGGACAGAACTATTGATCTGATCGCCCTTTCCCTCAGAACAGTCTTTACTTCATCCAACTaGAAGCAAAACAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: NGMGDRTIDLIALSLRTVFTSSN*KQNKFL
Trigger: CAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAA...GACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGTTTACTTCATCCAACTaGAAGCAAAACAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWFTSSN*KQNKFL
Trigger: CAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAA...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp AAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTCAGAATTGGATGTTATaGGTCTCTGCTCACATCATC +
Preference number: 4 (lower is better)
Translates to: KTKNKHTHQISFTGMLYGQNWML*VSAHII
Trigger: GATGATGTGAGCAGAGACGCATAACATCCAATTCTG...ACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGCAATATCACAAAGAGTaGGCCTACTTGGCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: TFRFSNPKIQASESMKTSQYHKE*AYLAKA
Trigger: AGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTG...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp AAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTCACAGTATTAGTGACTaGTACCTCTGGAAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: KTKNKHTHQISFTGMLYGHSISD*YLWKVR
Trigger: TCTCACTTTCCAGAGGTAGCAGTCACTAATACTGTG...ACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp GTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTAGAGTGGTAAAGGGTTaGTCTTCAGGGGTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: VSSQNWMLCVSAHIIHVARVVKG*SSGVLN
Trigger: ATTAAGAACCCCTGAAGAGCAACCCTTTACCACTCT...AGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTTCCAGCAGGTGTTATTaGTACTCCTGTGATCCTTTT +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVSSRCY*YSCDPF
Trigger: AAAAGGATCACAGGAGTAGCAATAACACCTGCTGGA...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp GTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCCTATTTCAATCTTTGTTTCCCTaGCAGAAGCAGGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: VQSLHFTLQQVVHALLLFQSLFP*QKQETA
Trigger: AGCTGTTTCCTGCTTCTGGCAGGGAAACAAAGATTG...AAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTTTGTGGTAGAGTTCTaGACCAGGCACTATATCCAA +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSFVVEF*TRHYIQ
Trigger: TTGGATATAGTGCCTGGTGCAGAACTCTACCACAAA...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp AGTAATGTTTTAACAGATACCTCTCTTCTCATCAGCTCCCCTCAAACCATCCCTGAAGTTTTAGTTACCTaGATTCCAGGACAGGCTATG +
Preference number: 4 (lower is better)
Translates to: SNVLTDTSLLISSPQTIPEVLVT*IPGQAM
Trigger: CATAGCCTGTCCTGGAATGCAGGTAACTAAAACTTC...AGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCATCTCAAAGGCATTATaGTGGGTGAAAGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSISKAL*WVKEAC
Trigger: ACAGGCTTCTTTCACCCAGCATAATGCCTTTGAGAT...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATCAGGAACTTCTTAAATaGCTTTCCCGTAATCTGGCA +
Preference number: 4 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYQELLK*LSRNLA
Trigger: TGCCAGATTACGGGAAAGCCATTTAAGAAGTTCCTG...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCATGCTGTCTCAGGGCTTaGTGTTGTTCCTTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVACCLRA*CCSFVG
Trigger: GCCCACAAAGGAACAACACCAAGCCCTGAGACAGCA...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CCA 90 bp TCCAAAGGAGGACAGTTCTGGATTGGGGGATGTATTAGTTTGCTAAGACTGCCATCTTGTTTCACATTCTaGAGCTCTTCTGTCAATTGT +
Preference number: 4 (lower is better)
Translates to: SKGGQFWIGGCISLLRLPSCFTF*SSSVNC
Trigger: ACAATTGACAGAAGAGCTCCAGAATGTGAAACAAGA...TGGCAGTCTTAGCAAACTAATACATCCCCCAATCCAGAACTGTCCTCCTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTAACCATCAACTTTTCTaGTTGGGGAGTTCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLNHQLF*LGSSLE
Trigger: CTCTAGAGAACTCCCCAACCAGAAAAGTTGATGGTT...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTAACCATCAACTTTTCTaGTTGGGGAGTTCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVNHQLF*LGSSLE
Trigger: CTCTAGAGAACTCCCCAACCAGAAAAGTTGATGGTT...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATTTTGAGCATCTCTTATaGCACCGACCTGATGGTTTA +
Preference number: 4 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYFEHLL*HRPDGL
Trigger: TAAACCATCAGGTCGGTGCCATAAGAGATGCTCAAA...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGGTCGTATTTGCACTaGAAAAGGATTCTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYGSYLH*KRILAK
Trigger: CTTAGCAAGAATCCTTTTCCAGTGCAAATACGACCC...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTGTGGTCATAGTGATATaGTTGTCTTTGCCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: KTKNKHTHQISFTGMLYGVVIVI*LSLPVH
Trigger: ATGCACAGGCAAAGACAACCATATCACTATGACCAC...ACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AGTAATGTTTTAACAGATACCTCTCTTCTCATCAGCTCCCCTCAAACCATCCCTCTTGCACCTTTAAGATaGTGCCACTTGGAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: SNVLTDTSLLISSPQTIPLAPLR*CHLEVC
Trigger: ACAAACTTCCAAGTGGCACCATCTTAAAGGTGCAAG...AGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCAATGTATCACATACATaGTTGGGGAAGGAGACACAG +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSNVSHT*LGKETQ
Trigger: CTGTGTCTCCTTCCCCAACCATGTATGTGATACATT...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTGACAGATTTTCTGGCTaGATGTTGTCGGATTTTTGT +
Preference number: 4 (lower is better)
Translates to: TQSPESPFHTSTSSACFTDRFSG*MLSDFC
Trigger: ACAAAAATCCGACAACATTCAGCCAGAAAATCTGTC...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR TCA 90 bp TACTTCTTTCAAGGCATCATCTCTTTCACACTTGAGCCTTTCCATTTCATCTGCCATCTCTTTCACACTTaGGCCTTTCCATTTCATCTG +
Preference number: 4 (lower is better)
Translates to: YFFQGIISFTLEPFHFICHLFHT*AFPFHL
Trigger: CAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATG...GCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS-3UTR TCA 90 bp GTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCCTATTTAGTTTGCTGCTGCTCTaGAATGCACTAACCTTGTAT +
Preference number: 4 (lower is better)
Translates to: VQSLHFTLQQVVHALLLFSLLLL*NALTLY
Trigger: ATACAAGGTTAGTGCATTTCAGAGCAGCAGCAAACT...AAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTGGTTGTTCTTTCCATaGTATGACTGGACTGTTACT +
Preference number: 4 (lower is better)
Translates to: KTKNKHTHQISFTGMLYGWLFFP*YDWTVT
Trigger: AGTAACAGTCCAGTCATATCATGGAAAGAACAACCA...ACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCAGGGACAAACCACTTaGTCTCTTCTAAGTATTTCA +
Preference number: 4 (lower is better)
Translates to: TQSPESPFHTSTSSACFTQGQTT*SLLSIS
Trigger: TGAAATACTTAGAAGAGATCAAGTGGTTTGTCCCTG...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCAAGGATTCTTTCATTTaGAAGGTGGTTGGACTAGAG +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSKDSFI*KVVGLE
Trigger: CTCTAGTCCAACCACCTTTCAAATGAAAGAATCCTT...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp GTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCCTATTTCAGAATTGGATGTTATaGGTCTCTGCTCACATCATC +
Preference number: 4 (lower is better)
Translates to: VQSLHFTLQQVVHALLLFQNWML*VSAHII
Trigger: GATGATGTGAGCAGAGACGCATAACATCCAATTCTG...AAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp GTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTTTCCTCTCTCTGAACTaGTATTTCCCTACTGAAAAC +
Preference number: 4 (lower is better)
Translates to: VSSQNWMLCVSAHIIHVAFLSLN*YFPTEN
Trigger: GTTTTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAA...AGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTATAAGAACAGAAGTTTaGTGCTGCTCTGAAATGCAC +
Preference number: 4 (lower is better)
Translates to: TQSPESPFHTSTSSACFTIRTEV*CCSEMH
Trigger: GTGCATTTCAGAGCAGCAGCAAACTTCTGTTCTTAT...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCGTCTTTGCCTGTGCATaGATGAATTTGGTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSVFACA*MNLVVL
Trigger: AAGAACAACCAAATTCATGCATGCACAGGCAAAGAC...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATCTCCAGAATAGGCTTTaGTTGACATCACACTTTTTG +
Preference number: 4 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYLQNRL*LTSHFL
Trigger: CAAAAAGTGTGATGTCAAGCAAAGCCTATTCTGGAG...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp TCCAAAGGAGGACAGTTCTGGATTGGGGGATGTATTAGTTTGCTAAGACTGCCATCTGCTAAAATCCATTaGTGGTTTTACTGCACAAAA +
Preference number: 4 (lower is better)
Translates to: SKGGQFWIGGCISLLRLPSAKIH*WFYCTK
Trigger: TTTTGTGCAGTAAAACCAGCAATGGATTTTAGCAGA...TGGCAGTCTTAGCAAACTAATACATCCCCCAATCCAGAACTGTCCTCCTTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTGGATTTTGTGCTTCTTaGAAAGACTATTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: TQSPESPFHTSTSSACFTGFCAS*KDYSEA
Trigger: TGCCTCTGAATAGTCTTTGCAAGAAGCACAAAATCC...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCAGCATTGTTCAGTTTaGAGTTTCAGTTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: TQSPESPFHTSTSSACFTQHCSV*SFSFEA
Trigger: AGCCTCAAAACTGAAACTGCAAACTGAACAATGCTG...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTGTTGTTCCTTTGTaGGCTGAATACCAAGATAAT +
Preference number: 4 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYGVVPL*AEYQDN
Trigger: ATTATCTTGGTATTCAGCCCACAAAGGAACAACACC...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCAAGTTTCTGGCAACCTaGACAAAATCTCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSKFLAT*TKSPKD
Trigger: GTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTT...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTCACTCTGGGTTAAGATaGTCTAATGTTATTGTCCGA +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVHSGLR*SNVIVR
Trigger: TCGGACAATAACATTAGACCATCTTAACCCAGAGTG...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp GTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCCTATTTTATTGTCTCACAGTTTaGAGGCTAGAAGTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: VQSLHFTLQQVVHALLLFYCLTV*RLEVQG
Trigger: ACCTTGGACTTCTAGCCTCCAAACTGTGAGACAATA...AAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTAGCACACTAACTGAGTaGCTTAAGCAACAGAAATGT +
Preference number: 4 (lower is better)
Translates to: TQSPESPFHTSTSSACFTSTLTE*LKQQKC
Trigger: ACATTTCTGTTGCTTAAGCCACTCAGTTAGTGTGCT...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTAGATTCCTTGTTGACTaGGACAAGTTGATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFRFLVD*DKLISW
Trigger: CCAGGAGATCAACTTGTCTCAGTCAACAAGGAATCT...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR TCA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGCGGATTTTTGTCTTATaGATGCTATCTCCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: TFRFSNPKIQASESMKTSRIFVL*MLSPKQ
Trigger: CTGCTTGGGAGATAGCATTCATAAGACAAAAATCCG...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTTATTTCCTAGACAGTaGGTAAGAAAGCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSLFPRQ*VRKPHL
Trigger: AAGATGAGGCTTTCTTACTCACTGTCTAGGAAATAA...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCGAATTGATTTCCATTaGGAGAACATGTGGATTGAA +
Preference number: 4 (lower is better)
Translates to: TQSPESPFHTSTSSACFTRIDFH*ENMWIE
Trigger: TTCAATCCACATGTTCTCTCAATGGAAATCAATTCG...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACATTGCCTGTGCATGCATaGATTTGGTTGTTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTLPVHA*IWLFFP
Trigger: TGGAAAGAACAACCAAATTCATGCATGCACAGGCAA...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGAGAATAGGCTTTGCTTaGCATCACACTTTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: TFRFSNPKIQASESMKTSRIGFA*HHTFCG
Trigger: CCCACAAAAAGTGTGATGTCAAGCAAAGCCTATTCT...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATAACTGTTCTGTATCTTaGTTACGGTTGTGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYNCSVS*LRLWSN
Trigger: ATTTGACCACAACCGTAATCAAGATACAGAACAGTT...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTTTGAGCCCAGGTGTTTaGGACCAGTCTGAACAAAAT +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFLSPGV*DQSEQN
Trigger: ATTTTGTTCAGACTGGTCTCAAACACCTGGGCTCAA...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR GCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTCATTTCCAGTTTCTCTaGCTTAAAGCGAACAGAGGG +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFHFQFL*LKANRG
Trigger: CCCTCTGTTCGCTTTAAGGCAGAGAAACTGGAAATG...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR GCA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATCTTCCTCATCATATGTaGTCTCAAATCTTTGACCTA +
Preference number: 4 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYLPHHM*SQIFDL
Trigger: TAGGTCAAAGATTTGAGAGCACATATGATGAGGAAG...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGGCTGCTGCTCTGAAATaGACTAACCTTGTATTTTGG +
Preference number: 4 (lower is better)
Translates to: TFRFSNPKIQASESMKTSAAALK*TNLVFW
Trigger: CCAAAATACAAGGTTAGTGCATTTCAGAGCAGCAGC...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTTACATAGCTCCCTTGTaGCAAATCAATTCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLYIAPL*QINSSV
Trigger: TACTGAAGAATTGATTTGGCACAAGGGAGCTATGTA...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTGACAAGTTGATCTCCTaGCTTCAAACGACCATCCTT +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFDKLIS*LQTTIL
Trigger: AAGGATGGTCGTTTGAAGCCAGGAGATCAACTTGTC...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405898.5
CDS-3UTR CCA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATTATTTGTTTTGGGAGTaGATGAGGTCTTTGGGATTA +
Preference number: 4 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYYLFWE*MRSLGL
Trigger: TAATCCCAAAGACCTCATCCACTCCCAAAACAAATA...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTTCTGATTTTCGTAATTaGCAGTCGAGTACCATGATT +
Preference number: 4 (lower is better)
Translates to: KPRINIPTRSASRACCMVSDFRN*QSSTMI
Trigger: AATCATGGTACTCGACTGCCAATTACGAAAATCAGA...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CCA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACATTAGAGAACAGCTTCTaGAATCACAGATCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTLENSF*NHRSAL
Trigger: CAAGGCAGATCTGTGATTCCAGAAGCTGTTCTCTAA...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACACTCCAGCAGGGGTTTTaGAAACTTATCTCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTLQQGF*KLISVF
Trigger: AAAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAG...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGTATCACATACATGGTTaGGGAAGGAGACACAGTTAC +
Preference number: 4 (lower is better)
Translates to: TFRFSNPKIQASESMKTSYHIHG*GRRHSY
Trigger: GTAACTGTGTCTCCTTCCCCAACCATGTATGTGATA...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCATTGACTGAGACAAGTTaGTCTCCTGGCTTCAAACGA +
Preference number: 4 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVALTETS*SPGFKR
Trigger: TCGTTTGAAGCCAGGAGATCAACTTGTCTCAGTCAA...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR TCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTCGGATTTTTGTCTTATaGATGCTATCTCCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFRIFVL*MLSPKQ
Trigger: CTGCTTGGGAGATAGCATTCATAAGACAAAAATCCG...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR TCA 90 bp TACTTCTTTCAAGGCATCATCTCTTTCACACTTGAGCCTTTCCATTTCATCTGCCACAGTACTGTTTTCTaGAGTAATTGGAATCTGTAC +
Preference number: 4 (lower is better)
Translates to: YFFQGIISFTLEPFHFICHSTVF*SNWNLY
Trigger: GTACAGATTCCAATTACTTCAGAAAACAGTACTGTG...GCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS-3UTR TCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTCATCTCTTTCACACTTaGGCCTTTCCATTTCATCTG +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFHLFHT*AFPFHL
Trigger: CAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATG...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR GCA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTTTTTGTCTTATGAATaGTATCTCCCAAGCAGATTC +
Preference number: 4 (lower is better)
Translates to: CFISELDVMRLCSHHPCSFLSYE*YLPSRF
Trigger: GAATCTGCTTGGGAGATAGCATTCATAAGACAAAAA...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp AAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTCAACAAGTAGTGCATaGTTTACTCCTATTTTAGAC +
Preference number: 4 (lower is better)
Translates to: KTKNKHTHQISFTGMLYGSTSSA*FTPILD
Trigger: GTCTAAAATAGGAGTAAAGCATGCACTACTTGTTGA...ACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR GCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTCACAGGATCCAAAATTaGCACGACTTGCTTTATTGG +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFHRIQN*HDLLYW
Trigger: CCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTG...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTCAGGAACTTCTTAAATaGCTTTCCCGTAATCTGGCA +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFQELLK*LSRNLA
Trigger: TGCCAGATTACGGGAAAGCCATTTAAGAAGTTCCTG...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398391.6
CDS-3UTR CCA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACAAGCAAAACAAGTTTCTaGCAACCTGGACAAAATCTC +
Preference number: 4 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTSKTSF*QPGQNL
Trigger: GAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCT...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACAGCTCATCACCATGTATaGCACAAAATGCCCAATAAA +
Preference number: 4 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTAHHHV*HKMPNK
Trigger: TTTATTGGGCATTTTGTGCCATACATGGTGATGAGC...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTGACAAGTTGATCTCCTaGCTTCAAACGACCATCTTT +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFDKLIS*LQTTIF
Trigger: AAAGATGGTCGTTTGAAGCCAGGAGATCAACTTGTC...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398391.6
CDS-3UTR TCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTGACAGATTTTCTGGCTaGATGTTGTCGGATTTTTGT +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFDRFSG*MLSDFC
Trigger: ACAAAAATCCGACAACATTCAGCCAGAAAATCTGTC...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR TCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCACTTAATGTTGAGGCTTaGGGTCCATATTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVALNVEA*GPYSPE
Trigger: TTCAGGAGAATATGGACCTCAAGCCTCAACATTAAG...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR TCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTCATTTCATCTGCTTCTaGAGAATCACAAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFHFICF*RITRKK
Trigger: CTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATG...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR TCA 90 bp TTAAGTGTATTTACTTCTTTCAAGGCATCATCTCTTTCACACTTGAGCCTTTCCCATTTCATCTGCTTCTaGAGAATCACAAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LSVFTSFKASSLSHLSLSHFICF*RITRKK
Trigger: CTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATG...GGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS-3UTR TCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCACATCTCTTTCACACTTaGGCCTTTCCATTTCATCTG +
Preference number: 4 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVAHLFHT*AFPFHL
Trigger: CAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATG...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR GCA 90 bp TACTTCTTTCAAGGCATCATCTCTTTCACACTTGAGCCTTTCCATTTCATCTGCTTTACTTCATCCAACTaGAAGCAAAACAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: YFFQGIISFTLEPFHFICFTSSN*KQNKFL
Trigger: CAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAA...GCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS-3UTR CCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTGGTGTTGTTCCTTTGTaGGCTGAATACCAAGATAAT +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFGVVPL*AEYQDN
Trigger: ATTATCTTGGTATTCAGCCCACAAAGGAACAACACC...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CCA 90 bp TTAAGTGTATTTACTTCTTTCAAGGCATCATCTCTTTCACACTTGAGCCTTTCCGGTGTTGTTCCTTTGTaGGCTGAATACCAAGATAAT +
Preference number: 4 (lower is better)
Translates to: LSVFTSFKASSLSHLSLSGVVPL*AEYQDN
Trigger: ATTATCTTGGTATTCAGCCCACAAAGGAACAACACC...GGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS-3UTR CCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTAAGTTTCTGGCAACCTaGACAAAATCTCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFKFLAT*TKSPKD
Trigger: GTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTT...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CCA 90 bp TTAAGTGTATTTACTTCTTTCAAGGCATCATCTCTTTCACACTTGAGCCTTTCCAAGTTTCTGGCAACCTaGACAAAATCTCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: LSVFTSFKASSLSHLSLSKFLAT*TKSPKD
Trigger: GTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTT...GGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS-3UTR CCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTAGCAAAACAAGTTTCTaGCAACCTGGACAAAATCTC +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFSKTSF*QPGQNL
Trigger: GAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCT...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CCA 90 bp TTTACTTCTTTCAAGGCATCATCTCTTTCACACTTGAGCCTTTCCATTTCATCTAGCAAAACAAGTTTCTaGCAACCTGGACAAAATCTC +
Preference number: 4 (lower is better)
Translates to: FTSFKASSLSHLSLSISSSKTSF*QPGQNL
Trigger: GAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCT...AGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS-3UTR CCA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGAGCGTCTTTAGTATTTaGATGTATAATAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: TFRFSNPKIQASESMKTSSVFSI*MYNRHC
Trigger: GCAGTGCCTATTATACATCCAAATACTAAAGACGCT...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTCATCTAATTCTGCCCTaGCCACTTAAGTGTATTTAC +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFHLILP*PLKCIY
Trigger: GTAAATACACTTAAGTGGCCAGGGCAGAATTAGATG...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
3UTR CAA 72 bp TCAATAAGAATATCTAAGCAAAATCTTGATGAGCTATaGGCCAGGGGTGCTTTGGAAGGATTCTTTCATTTG +
Preference number: 4 (lower is better)
Translates to: SIRISKQNLDEL*ARGALEGFFHL
Trigger: CAAATGAAAGAATCCTTCCAAAGCACCCCTGGCCAATAGCTCATCAAGATTTTGCTTAGATATTCTTATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR TCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCAGACAGATTTTCTGGCTaGATGTTGTCGGATTTTTGT +
Preference number: 4 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVADRFSG*MLSDFC
Trigger: ACAAAAATCCGACAACATTCAGCCAGAAAATCTGTC...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR TCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTCACAGTACTGTTTTCTaGAGTAATTGGAATCTGTAC +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFHSTVF*SNWNLY
Trigger: GTACAGATTCCAATTACTTCAGAAAACAGTACTGTG...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR TCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCACATTTCATCTGCTTCTaGAGAATCACAAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVAHFICF*RITRKK
Trigger: CTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATG...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTCTGAATATATACCAATaGGCCTTCATTCCGGTTAAT +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFLNIYQ*AFIPVN
Trigger: ATTAACCGGAATGAAGGCCCATTGGTATATATTCAG...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405898.5
CDS-3UTR CCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCACATCTAATTCTGCCCTaGCCACTTAAGTGTATTTAC +
Preference number: 4 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVAHLILP*PLKCIY
Trigger: GTAAATACACTTAAGTGGCCAGGGCAGAATTAGATG...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR TCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCACACAGTACTGTTTTCTaGAGTAATTGGAATCTGTAC +
Preference number: 4 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVAHSTVF*SNWNLY
Trigger: GTACAGATTCCAATTACTTCAGAAAACAGTACTGTG...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR GCA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTTTTACTTCATCCAACTaGAAGCAAAACAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: KNVFPKELTGSKIATTCFFTSSN*KQNKFL
Trigger: CAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAA...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCATATTTGTTTTGGGAGTaGATGAGGTCTTTGGGATTA +
Preference number: 4 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVAYLFWE*MRSLGL
Trigger: TAATCCCAAAGACCTCATCCACTCCCAAAACAAATA...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCAATATATTTGCAACAATaGCTTCCTCTAGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVAIYLQQ*LPLEVE
Trigger: CTCAACCTCTAGAGGAAGCCATTGTTGCAAATATAT...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
3UTR CAA 72 bp TACTTTGATTTCAGTGACTCAAGCACCTTCTTTGTTTaGCTCACTAGAAACGAATTAGAAAACTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: YFDFSDSSTFFV*LTRNELENSSS
Trigger: GCTTGAAGAGTTTTCTAATTCGTTTCTAGTGAGCAAAACAAAGAAGGTGCTTGAGTCACTGAAATCAAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR GCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCATTTTTGTCTTATGAATaGTATCTCCCAAGCAGATTC +
Preference number: 4 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVAFLSYE*YLPSRF
Trigger: GAATCTGCTTGGGAGATAGCATTCATAAGACAAAAA...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR GCA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCATTTACTTCATCCAACTaGAAGCAAAACAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVAFTSSN*KQNKFL
Trigger: CAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAA...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CAA 90 bp CGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCCTTGGTGTTGTTCCTTaGTGGGCTGAATACCAAGAT +
Preference number: 5 (lower is better)
Translates to: RDCAAAVRSPAWATERDSLGVVP*WAEYQD
Trigger: ATCTTGGTATTCAGCCCACAAAGGAACAACACCAAG...GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp CGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCATATCTGAGCAACTGTaGGTGATAAGACATGAGGCT +
Preference number: 5 (lower is better)
Translates to: RDCAAAVRSPAWATERDSISEQL*VIRHEA
Trigger: AGCCTCATGTCTTATCACCAACAGTTGCTCAGATAT...GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp CGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCAGGATTTTGTGCTTCTaGCAAAGACTATTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: RDCAAAVRSPAWATERDSRILCF*QRLFRG
Trigger: GCCTCTGAATAGTCTTTGCAAGAAGCACAAAATCCT...GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTCTACTTGGCGAAGGCTaGGGTGCAGAGAAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVLLGEG*GAEKGE
Trigger: TTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAG...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTACCTGCACCTCTTTGTaGGACGGCTGTCCTCAGGCT +
Preference number: 5 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVTCTSL*DGCPQA
Trigger: AGCCTGAGGACAGCCGTCCAACAAAGAGGTGCAGGT...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp CGAGATTGCGCCGCTGCAGTCCGCAGTCCCGCCTGGGCGACAGAGCGAGACTCCGCTGAAACAGTTCTCTaGTATTTACTTAAAGGCGTA +
Preference number: 5 (lower is better)
Translates to: RDCAAAVRSPAWATERDSAETVL*YLLKGV
Trigger: TACGCCTTTAAGTAAATACAAGAGAACTGTTTCAGC...GGAGTCTCGCTCTGTCGCCCAGGCGGGACTGCGGACTGCAGCGGCGCAATCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATAATTCAAGCGCCAGCGTaGCTGGGATGCTACGTCCAT +
Preference number: 5 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIIQAPA*LGCYVH
Trigger: ATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAAT...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGCCTACCTGTCCTGGCTaGCCCAGAGCTGAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLPTCPG*PRAEGV
Trigger: AACTCCCTCAGCTCTGGGCAAGCCAGGACAGGTAGG...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp TATGGGGGAAGGGGGACTGCTCATGGAATCAGAAGACTTAGGAGTGAGTCTCGGTGGGAGCTGCTCGACTaGGGCTTTAGGCTTCCATCT +
Preference number: 5 (lower is better)
Translates to: YGGRGTAHGIRRLRSESRWELLD*GFRLPS
Trigger: AGATGGAAGCCTAAAGCCCAAGTCGAGCAGCTCCCA...CCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGAACTCAGCTCAGTCCTaGTGTAGGTGCAGGGTGACC +
Preference number: 5 (lower is better)
Translates to: TTVTENRAVIARSWGGEGNSAQS*CRCRVT
Trigger: GGTCACCCTGCACCTACACAAGGACTGAGCTGAGTT...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTCTTGGTGTTGTTCCTTaGTGGGCTGAATACCAAGAT +
Preference number: 5 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVLGVVP*WAEYQD
Trigger: ATCTTGGTATTCAGCCCACAAAGGAACAACACCAAG...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATAGACTACGCAGGGCTCTaGTTTCTTCAACTACAGCTT +
Preference number: 5 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIDYAGL*FLQLQL
Trigger: AAGCTGTAGTTGAAGAAACAAGAGCCCTGCGTAGTC...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGCTACTTGGCGAAGGCTaGGGTGCAGAGAAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWLLGEG*GAEKGE
Trigger: TTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAG...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCAAAGAGTGCGCCTACTaGGCGAAGGCTTGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFKECAY*AKAWVQ
Trigger: CTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTT...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATTGCAGTGAGCCGAGATaGCGCCGCTGCAGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYCSEPR*RRCSPQ
Trigger: CTGCGGACTGCAGCGGCGCAATCTCGGCTCACTGCA...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGCCAATGTTGACCACATaGGGCTGGAGGAAGCTCACT +
Preference number: 5 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLPMLTT*GWRKLT
Trigger: AGTGAGCTTCCTCCAGCCCAATGTGGTCAACATTGG...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTCCATAATCACAGAATaGGCCCCAGTCTTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: TKSAPTWRRLGCREGGRVSIITE*APVFLC
Trigger: ACAGAGAAAGACTGGGGCCAATTCTGTGATTATGGA...AACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS GCA 90 bp GGCACGAACAGATTTAACAAGTTCCTTAGATTCAAGCGCCAGCGTTaGTGGGATGCTACGTCCATTCCTTCCCAGTGGTGTGAGGGAAGT +
Preference number: 5 (lower is better)
Translates to: GTNRFNKFLRFKRQR*WDATSIPSQWCEGS
Trigger: ACTTCCCTCACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATATTTAGCTCTGTAATCTaGGCCTCTAACAGACGGATC +
Preference number: 5 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIFSSVI*ASNRRI
Trigger: GATCCGTCTGTTAGAGGCCAAGATTACAGAGCTAAA...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp AATGGAATGGGGGACAGAACTATTGATCTGATCGCCCTTTCCCTCAGAACAGTCTGGATGAGGTGTCTCTaGTCAGTGGGCTGTGTGCCT +
Preference number: 5 (lower is better)
Translates to: NGMGDRTIDLIALSLRTVWMRCL*SVGCVP
Trigger: AGGCACACAGCCCACTGACAAGAGACACCTCATCCA...GACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATAGTATCACATACATGGTaGGGGAAGGAGACACAGTTA +
Preference number: 5 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIVSHTW*GKETQL
Trigger: TAACTGTGTCTCCTTCCCCAACCATGTATGTGATAC...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS CCA 90 bp ACGAACAGATTTAACAAGTTCCTTAGATTCAAGCGCCAGCGTTGCTaGGATGCTACGTCCATTCCTTCCCAGTGGTGTGAGGGAAGTCTG +
Preference number: 5 (lower is better)
Translates to: TNRFNKFLRFKRQRC*DATSIPSQWCEGSL
Trigger: CAGACTTCCCTCACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCTACAGCTTTGGCTTCTaGTTTCACATTCTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: KRCLLNLCGMHSCGASCIYSFGF*FHILEL
Trigger: GAGCTCCAGAATGTGAAACAAGAAGCCAAAGCTGTA...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp TATGGGGGAAGGGGGACTGCTCATGGAATCAGAAGACTTAGGAGTGAGTCTCGGCATCAACTTTTCTGGTaGGGGAGTTCTCTAGAGCAA +
Preference number: 5 (lower is better)
Translates to: YGGRGTAHGIRRLRSESRHQLFW*GSSLEQ
Trigger: TTGCTCTAGAGAACTCCCCAACCAGAAAAGTTGATG...CCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAACCTGACCATGCTTTTTaGAGCATCTCTTATGGCACC +
Preference number: 5 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEPDHAF*SISYGT
Trigger: GGTGCCATAAGAGATGCTCAAAAAAGCATGGTCAGG...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGACTGGAAAAGGATTCTaGCTAAGCCCTGACCATGCT +
Preference number: 5 (lower is better)
Translates to: TTVTENRAVIARSWGGEGTGKGF*LSPDHA
Trigger: AGCATGGTCAGGGCTTAGCAAGAATCCTTTTCCAGT...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATAGAAGTGTTTGCTGAGTaGAACTGGTTTGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIEVFAE*NWFEKR
Trigger: CCTTTTCTCAAACCAGTTCAACTCAGCAAACACTTC...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAAAACCTTACCTACAGTaGAGTGAGCTCCCTCCACAA +
Preference number: 5 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEKPYLQ*SELPPQ
Trigger: TTGTGGAGGGAGCTCACTCAACTGTAGGTAAGGTTT...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGTCTCAGGGCTTGGTGTaGTTCCTTTGTGGGCTGAAT +
Preference number: 5 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWSQGLV*FLCGLN
Trigger: ATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGA...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGCATCAACTTTTCTGGTaGGGGAGTTCTCTAGAGCAA +
Preference number: 5 (lower is better)
Translates to: TTVTENRAVIARSWGGEGHQLFW*GSSLEQ
Trigger: TTGCTCTAGAGAACTCCCCAACCAGAAAAGTTGATG...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCTGTTTCATCTCAGAATaGGATGTTATGCGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: KRCLLNLCGMHSCGASCICFISE*DVMRLC
Trigger: GCAGAGACGCATAACATCCAATTCTGAGATGAAACA...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTAAAGAGTGCGCCTACTaGGCGAAGGCTTGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: KPRINIPTRSASRACCMVKECAY*AKAWVQ
Trigger: CTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTT...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTGCTGCTCCCTGGAACTaGGTCCAGAAGGTTAAGCCC +
Preference number: 5 (lower is better)
Translates to: TQSPESPFHTSTSSACFTAAPWN*VQKVKP
Trigger: GGGCTTAACCTTCTGGACCAAGTTCCAGGGAGCAGC...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGAATGTAATTGAGGTTTaGCTGCTCCCTGGAACTTGG +
Preference number: 5 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLNVIEV*LLPGTW
Trigger: CCAAGTTCCAGGGAGCAGCAAAACCTCAATTACATT...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp AGAGTGCGCCTACTTGGCGAAGGCTTGGGTGCAGAGAAGGGGGAAGGGTTTATATTCTTAATTCAATCTTaGTTTCCCTGCCAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: RVRLLGEGLGAEKGEGFIFLIQS*FPCQKQ
Trigger: CTGCTTCTGGCAGGGAAACAAAGATTGAATTAAGAA...TATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACGTATTGTCTCACAGTTaGGAGGCTAGAAGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHVLSHS*EARSPR
Trigger: CCTTGGACTTCTAGCCTCCAAACTGTGAGACAATAC...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp CTCGGTGCTGGGACAGAGAGCTTCCTCTCTCTGAACTGCTATTTCCCTACTGAAGTGCCACTTGGAAGTTaGTTCTTACTACTAACCCAG +
Preference number: 5 (lower is better)
Translates to: LGAGTESFLSLNCYFPTEVPLGS*FLLLTQ
Trigger: CTGGGTTAGTAGTAAGAACAAACTTCCAAGTGGCAC...TTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGGATTCTAACCTCAACTaGGCTCCGGTAATTATGCTT +
Preference number: 5 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLDSNLN*APVIML
Trigger: AAGCATAATTACCGGAGCCAAGTTGAGGTTAGAATC...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp CCACTCTCATGCATGACAGCTCCCTGTGCTTTCACTCTCAACATTCAGCACCTGTTCGTGATGACCACATaGCTACGGTTGATTGATGTT +
Preference number: 5 (lower is better)
Translates to: PLSCMTAPCAFTLNIQHLFVMTT*LRLIDV
Trigger: AACATCAATCAACCGTAGCAATGTGGTCATCACGAA...CAGGTGCTGAATGTTGAGAGTGAAAGCACAGGGAGCTGTCATGCATGAGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCGGTAGGATTTCAGAGTaGGAAGCCTTCCAGTTAACC +
Preference number: 5 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFGRISE*EAFQLT
Trigger: GGTTAACTGGAAGGCTTCCAACTCTGAAATCCTACC...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCGAGTGGATGAGGTCTTaGGGATTAGTATTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFEWMRS*GLVFQE
Trigger: CTCCTGAAATACTAATCCCAAAGACCTCATCCACTC...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp TATGGGGGAAGGGGGACTGCTCATGGAATCAGAAGACTTAGGAGTGAGTCTCGGATGTCATTATTTGTTTaGGGAGTGGATGAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: YGGRGTAHGIRRLRSESRMSLFV*GVDEVF
Trigger: AAAGACCTCATCCACTCCCAAAACAAATAATGACAT...CCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp AAGAGGTGCCTTCTGAATCTCTGTGGAATGCACAGCTGTGGAGCCAGCTGCATCATGTCATTATTTGTTTaGGGAGTGGATGAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: KRCLLNLCGMHSCGASCIMSLFV*GVDEVF
Trigger: AAAGACCTCATCCACTCCCAAAACAAATAATGACAT...GATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTATAGAGGGGCCATGTTaGACCGAAGAGGTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLIEGPC*TEEVPS
Trigger: AGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTAT...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp TGTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCATAGAGGGGCCATGTTaGACCGAAGAGGTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: CFISELDVMRLCSHHPCSIEGPC*TEEVPS
Trigger: AGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTAT...GCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGCACATATATCTCACATaGTATCCCTACTACTCAGTG +
Preference number: 5 (lower is better)
Translates to: TTVTENRAVIARSWGGEGHIYLT*YPYYSV
Trigger: CACTGAGTAGTAGGGATACAATGTGAGATATATGTG...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp TCCTCATTCAGGTCCAGCAGGTGTTATTGCTACTCCTGTGATCCTTTTGGGTTCGGTGAGAAGGTTTGTTaGAAATTGGCAAGGAGCAAG +
Preference number: 5 (lower is better)
Translates to: SSFRSSRCYCYSCDPFGFGEKVC*KLARSK
Trigger: CTTGCTCCTTGCCAATTTCAAACAAACCTTCTCACC...GAACCCAAAAGGATCACAGGAGTAGCAATAACACCTGCTGGACCTGAATGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ACTACAGTTACGGAGAATAGAGCAGTAATTGCCAGGAGTTGGGGTGGGGAAGGGTTAAGATGGTGCCACTaGGAAGTTTGTTCTTACTAC +
Preference number: 5 (lower is better)
Translates to: TTVTENRAVIARSWGGEGLRWCH*EVCSYY
Trigger: GTAGTAAGAACAAACTTCCAAGTGGCACCATCTTAA...CCCTTCCCCACCCCAACTCCTGGCAATTACTGCTCTATTCTCCGTAACTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS TCA 90 bp GCTGGGATGCTACGTCCATTCCTTCCCAGTGGTGTGAGGGAAGTCTaGGAAGCTAACACAGCTCTTCTTTCACTTAAATTTGATAAAGGA +
Preference number: 5 (lower is better)
Translates to: AGMLRPFLPSGVREV*EANTALLSLKFDKG
Trigger: TCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAGCTTCTCAGACTTCCCTCACACCACTGGGAAGGAATGGACGTAGCATCCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACTCTTCAACTACAGCTTaGGCTTCTTGTTTCACATTC +
Preference number: 5 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHSSTTA*ASCFTF
Trigger: GAATGTGAAACAAGAAGCCAAAGCTGTAGTTGAAGA...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGATTCAAGCGCCAGCGTaGCTGGGATGCTACGTCCAT +
Preference number: 5 (lower is better)
Translates to: TFRFSNPKIQASESMKTSIQAPA*LGCYVH
Trigger: ATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAAT...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATTCTAATCCTCCAATGTaGACCACATTGGGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYSNPPM*TTLGWR
Trigger: CCTCCAGCCCAATGTGGTCAACATTGGAGGATTAGA...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTGACGTGATTGCAGTATaGCACTCCAGCCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: KNVFPKELTGSKIATTCFDVIAV*HSSLGD
Trigger: GTCGCCCAGGCTGGAGTGCAATACTGCAATCACGTC...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS CCA 90 bp AGTCTGCTTGTACTTGCTGTCTCAGGGCTTGGTGTTGTTCCTTTGTaGGCTGAATACCAAGATAATTTAGAGCCATTTCCAGTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SLLVLAVSGLGVVPL*AEYQDNLEPFPVSL
Trigger: CAGAGAAACTGGAAATGGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376352.6
ENST00000398391.6
ENST00000405898.5
ENST00000434978.6
CDS CCA 90 bp AGTCTGCTTGTACTTGCTGTCTCAGGGCTTGGTGTTGTTCCTTTGTaGGCTGAATACCAAGATAATTTAGAGCCTGTATTAGACAAACCC +
Preference number: 5 (lower is better)
Translates to: SLLVLAVSGLGVVPL*AEYQDNLEPVLDKP
Trigger: GGGTTTGTCTAATACAGGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS-3UTR CAA 90 bp AGAAGTCTGCTGAAACAATATCACAAAGAGTGCGCCTACTTGGCGAAGGCTTGGTCATCTCTTTCACACTaGAGCCTTTCCATTTCATCT +
Preference number: 5 (lower is better)
Translates to: RSLLKQYHKECAYLAKAWSSLSH*SLSISS
Trigger: AGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGA...CCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGACTACGCAGGGCTCTaGTTTCTTCAACTACAGCTT +
Preference number: 5 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYDYAGL*FLQLQL
Trigger: AAGCTGTAGTTGAAGAAACAAGAGCCCTGCGTAGTC...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp AAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTCTCAGGTTCTTGGACTaGGTGGAAGGAAGGTTATTC +
Preference number: 5 (lower is better)
Translates to: KTKNKHTHQISFTGMLYGLRFLD*VEGRLF
Trigger: GAATAACCTTCCTTCCACCAAGTCCAAGAACCTGAG...ACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp GTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCCTATTTAATGTGATGGGTAGATaGATGGGGACAGGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: VQSLHFTLQQVVHALLLFNVMGR*MGTGVV
Trigger: CACCACACCTGTCCCCATCAATCTACCCATCACATT...AAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp AATGGAATGGGGGACAGAACTATTGATCTGATCGCCCTTTCCCTCAGAACAGTCAAGGTTTGTTTGAAATaGGCAAGGAGCAAGGTACAT +
Preference number: 5 (lower is better)
Translates to: NGMGDRTIDLIALSLRTVKVCLK*ARSKVH
Trigger: ATGTACCTTGCTCCTTGCCAATTTCAAACAAACCTT...GACTGTTCTGAGGGAAAGGGCGATCAGATCAATAGTTCTGTCCCCCATTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp GGAACATGCTTTGACTGCATTGCAGGCTGGAAGCACCTGGAAATTTACACCCACCTCAATTCTAGGATTTaGTGCTTCTTGCAAAGACTA +
Preference number: 5 (lower is better)
Translates to: GTCFDCIAGWKHLEIYTHLNSRI*CFLQRL
Trigger: TAGTCTTTGCAAGAAGCACAAAATCCTAGAATTGAG...GTGGGTGTAAATTTCCAGGTGCTTCCAGCCTGCAATGCAGTCAAAGCATGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp AGTAATGTTTTAACAGATACCTCTCTTCTCATCAGCTCCCCTCAAACCATCCCTTTGGCCAGGGGTGCTTaGGAAGGATTCTTTCATTTG +
Preference number: 5 (lower is better)
Translates to: SNVLTDTSLLISSPQTIPLARGA*EGFFHL
Trigger: CAAATGAAAGAATCCTTCCAAAGCACCCCTGGCCAA...AGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTGAGGACAGTTCTGGATaGGGGGATGTATTAGTTTGC +
Preference number: 5 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLEDSSG*GDVLVC
Trigger: GCAAACTAATACATCCCCCAATCCAGAACTGTCCTC...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGAGTGGATGAGGTCTTaGGGATTAGTATTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYEWMRS*GLVFQE
Trigger: CTCCTGAAATACTAATCCCAAAGACCTCATCCACTC...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGTCTCAGGGCTTGGTGTaGTTCCTTTGTGGGCTGAAT +
Preference number: 5 (lower is better)
Translates to: TFRFSNPKIQASESMKTSSQGLV*FLCGLN
Trigger: ATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGA...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp AGGTCCAGGATCTTTGACAATGGCAAGATAAAGACGGTAAACTTAGATGTCCTGTTTAGCTCTGTAATCTaGGCCTCTAACAGACGGATC +
Preference number: 5 (lower is better)
Translates to: RSRIFDNGKIKTVNLDVLFSSVI*ASNRRI
Trigger: GATCCGTCTGTTAGAGGCCAAGATTACAGAGCTAAA...CAGGACATCTAAGTTTACCGTCTTTATCTTGCCATTGTCAAAGATCCTGGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACAGGCTTCTCTCAAAACTaGTCTCCCCGAAGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTGFSQN*SPRSFL
Trigger: TAGGAAGCTTCGGGGAGACAAGTTTTGAGAGAAGCC...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTGTGTGCCTGAGTACTTaGATTTCAGTGACTCAAGCA +
Preference number: 5 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLVCLST*ISVTQA
Trigger: TGCTTGAGTCACTGAAATCAAAGTACTCAGGCACAC...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACACTACAGGAACATGCTTaGACTGCATTGCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTLQEHA*TALQAG
Trigger: TCCAGCCTGCAATGCAGTCAAAGCATGTTCCTGTAG...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACATTACTTCTCTTTCCTTaGTGCCCTGGAAGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTLLLFP*CPGSPS
Trigger: TGAGGGGCTTCCAGGGCACAAAGGAAAGAGAAGTAA...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS TCA 90 bp TACATGACAGATTTTCTGGCTGAATGTTGTCGGATTTTTGTCTTATaGATGCTATCTCCCAAGCAGATTCTAACCTCAACTTGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: YMTDFLAECCRIFVL*MLSPKQILTSTWLR
Trigger: CCGGAGCCAAGTTGAGGTTAGAATCTGCTTGGGAGATAGCATTCATAAGACAAAAATCCGACAACATTCAGCCAGAAAATCTGTCATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376352.6
ENST00000405898.5
ENST00000434978.6
CDS-3UTR CAA 90 bp AAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTCTTTTCCAACTATCTaGAGACACTTCCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: KTKNKHTHQISFTGMLYGSFPTI*RHFLQI
Trigger: GATCTGCAGGAAGTGTCTCAAGATAGTTGGAAAAGA...ACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTTCTTTTCCAACTATCTaGAGACACTTCCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: TQSPESPFHTSTSSACFTSFPTI*RHFLQI
Trigger: GATCTGCAGGAAGTGTCTCAAGATAGTTGGAAAAGA...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp TTTACTTCTTTCAAGGCATCATCTCTTTCACACTTGAGCCTTTCCATTTCATCTTCTCAGGGCTTGGTGTaGTTCCTTTGTGGGCTGAAT +
Preference number: 5 (lower is better)
Translates to: FTSFKASSLSHLSLSISSSQGLV*FLCGLN
Trigger: ATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGA...AGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS-3UTR CAA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTTGTTTCATCTCAGAATaGGATGTTATGCGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: TQSPESPFHTSTSSACFTCFISE*DVMRLC
Trigger: GCAGAGACGCATAACATCCAATTCTGAGATGAAACA...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTACTCAAGCACCTTCTTaGTTTTGCTCACTAGAAACG +
Preference number: 5 (lower is better)
Translates to: KPRINIPTRSASRACCMVTQAPS*FCSLET
Trigger: CGTTTCTAGTGAGCAAAACAAAGAAGGTGCTTGAGT...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp GTTTCATCTCAGAATTGGATGTTATGCGTCTCTGCTCACATCATCCATGTAGCTACTCCTGTGATCCTTTaGGGTTCACAGAAATCAATC +
Preference number: 5 (lower is better)
Translates to: VSSQNWMLCVSAHIIHVATPVIL*GSQKSI
Trigger: GATTGATTTCTGTGAACCCAAAAGGATCACAGGAGT...AGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp GTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCCTATTTAGTTCTTTCCTTTCCTaGGGGTCACTGCTAAACTCT +
Preference number: 5 (lower is better)
Translates to: VQSLHFTLQQVVHALLLFSSFLS*GSLLNS
Trigger: AGAGTTTAGCAGTGACCCCAAGGAAAGGAAAGAACT...AAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp CTGAAAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATAGCAACAGAAATGTATaGTCTCACAGTTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: LKTKNKHTHQISFTGMLYSNRNV*SHSLEA
Trigger: AGCCTCCAAACTGTGAGACAATACATTTCTGTTGCT...ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGGGGAGTTCCCAGGATTaGGGACCTTCAGTTTACAAA +
Preference number: 5 (lower is better)
Translates to: TFRFSNPKIQASESMKTSGSSQD*GPSVYK
Trigger: TTTGTAAACTGAAGGTCCCAAATCCTGGGAACTCCC...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS TCA 90 bp TCAAATGATACACCAATCATAGATTCCTTGTTGACTGAGACAAGTTaGTCTCCTGGCTTCAAACGACCATCTTTTCAAGTAGACTGGGTG +
Preference number: 5 (lower is better)
Translates to: SNDTPIIDSLLTETS*SPGFKRPSFQVDWV
Trigger: CACCCAGTCTACTTGAAAAGATGGTCGTTTGAAGCCAGGAGATCAACTTGTCTCAGTCAACAAGGAATCTATGATTGGTGTATCATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398391.6
CDS-3UTR CAA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCATCTCAGGGCTTGGTGTaGTTCCTTTGTGGGCTGAAT +
Preference number: 5 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVASQGLV*FLCGLN
Trigger: ATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGA...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CAA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGTGTTTTGTCTTCCTGTaGTCTCTTCTCGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: TFRFSNPKIQASESMKTSCFVFL*SLLVCA
Trigger: AGCACACACGAGAAGAGACAACAGGAAGACAAAACA...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ACCCAAAGTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTGAAGGATTCTTTCATTaGAAAGGTGGTTGGACTAGA +
Preference number: 5 (lower is better)
Translates to: TQSPESPFHTSTSSACFTEGFFH*KGGWTR
Trigger: TCTAGTCCAACCACCTTTCAAATGAAAGAATCCTTC...AGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTGAGTGGATGAGGTCTTaGGGATTAGTATTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: KNVFPKELTGSKIATTCFEWMRS*GLVFQE
Trigger: CTCCTGAAATACTAATCCCAAAGACCTCATCCACTC...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CAA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTCTTGGTGTTGTTCCTTaGTGGGCTGAATACCAAGAT +
Preference number: 5 (lower is better)
Translates to: KNVFPKELTGSKIATTCFLGVVP*WAEYQD
Trigger: ATCTTGGTATTCAGCCCACAAAGGAACAACACCAAG...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CAA 90 bp TTAAGTGTATTTACTTCTTTCAAGGCATCATCTCTTTCACACTTGAGCCTTTCCCTTGGTGTTGTTCCTTaGTGGGCTGAATACCAAGAT +
Preference number: 5 (lower is better)
Translates to: LSVFTSFKASSLSHLSLSLGVVP*WAEYQD
Trigger: ATCTTGGTATTCAGCCCACAAAGGAACAACACCAAG...GGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS-3UTR CAA 90 bp GTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCCTATTTTCATCTCTTTCACACTaGAGCCTTTCCATTTCATCT +
Preference number: 5 (lower is better)
Translates to: VQSLHFTLQQVVHALLLFSSLSH*SLSISS
Trigger: AGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGA...AAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS-3UTR CAA 90 bp TACTTCTTTCAAGGCATCATCTCTTTCACACTTGAGCCTTTCCATTTCATCTGCTCATCTCTTTCACACTaGAGCCTTTCCATTTCATCT +
Preference number: 5 (lower is better)
Translates to: YFFQGIISFTLEPFHFICSSLSH*SLSISS
Trigger: AGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGA...GCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS-3UTR CAA 90 bp AAACCAAGAATAAACATACCCACCAGATCAGCTTCACGGGCATGTTGTATGGTTAGCACCTTCTTTGTTTaGCTCACTAGAAACGAATTA +
Preference number: 5 (lower is better)
Translates to: KPRINIPTRSASRACCMVSTFFV*LTRNEL
Trigger: TAATTCGTTTCTAGTGAGCAAAACAAAGAAGGTGCT...AACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp TTTCTAGAAGTAGAAGGTGCTCCAGCAGGGGTTTTGGAAACTTATCTCAGTCTTAACAATATAAATGTATaGTTCACAGCTCTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: FLEVEGAPAGVLETYLSLNNINV*FTALEA
Trigger: AGCCTCCAGAGCTGTGAACAATACATTTATATTGTT...AAGACTGAGATAAGTTTCCAAAACCCCTGCTGGAGCACCTTCTACTTCTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp GTCCAGAGTCTCCATTTCACACTTCAACAAGTAGTGCATGCTTTACTCCTATTTCAATACATAGCTCCCTaGTGCCAAATCAATTCTTCA +
Preference number: 5 (lower is better)
Translates to: VQSLHFTLQQVVHALLLFQYIAP*CQINSS
Trigger: TGAAGAATTGATTTGGCACAAGGGAGCTATGTATTG...AAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACATATTACTTTTCACCCTaGGGCCACTTCCTAATTCAC +
Preference number: 5 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTYYFSP*GHFLIH
Trigger: GTGAATTAGGAAGTGGCCCAAGGGTGAAAAGTAATA...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp AGTAATGTTTTAACAGATACCTCTCTTCTCATCAGCTCCCCTCAAACCATCCCTCAGGAACAAGGAGACTaGATTCTCTATACCATATTT +
Preference number: 5 (lower is better)
Translates to: SNVLTDTSLLISSPQTIPQEQGD*ILYTIF
Trigger: AAATATGGTATAGAGAATCAAGTCTCCTTGTTCCTG...AGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACATATCTAAGCAAAATCTaGATGAGCTATTGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTYLSKI*MSYWPG
Trigger: CCCTGGCCAATAGCTCATCAAGATTTTGCTTAGATA...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp ACATTCAGATTTTCTAACCCTAAAATCCAAGCCAGTGAGTCAATGAAGACTTCGATGAAACAAATCTCATaGCTGACACAGCTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: TFRFSNPKIQASESMKTSMKQIS*LTQLSG
Trigger: CCCAGAAAGCTGTGTCAGCAATGAGATTTGTTTCAT...CGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS CCA 90 bp AAACAGTCGACCAGGATTAAACACCCAAGGGAAGTCAGCTCTTTATaGATTAAGTGCCTATTGAAGATTAGCTTCCTGATTTTACTACTA +
Preference number: 5 (lower is better)
Translates to: KQSTRIKHPREVSSL*IKCLLKISFLILLL
Trigger: TAGTAGTAAAATCAGGAAGCTAATCTTCAATAGGCACTTAATCCATAAAGAGCTGACTTCCCTTGGGTGTTTAATCCTGGTCGACTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468837.1
CDS-3UTR CAA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTTCTTTTCCAACTATCTaGAGACACTTCCTGCAGATC +
Preference number: 5 (lower is better)
Translates to: KNVFPKELTGSKIATTCFSFPTI*RHFLQI
Trigger: GATCTGCAGGAAGTGTCTCAAGATAGTTGGAAAAGA...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000398391.6
CDS-3UTR CAA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCAGAGTGGATGAGGTCTTaGGGATTAGTATTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVAEWMRS*GLVFQE
Trigger: CTCCTGAAATACTAATCCCAAAGACCTCATCCACTC...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CAA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCACTTGGTGTTGTTCCTTaGTGGGCTGAATACCAAGAT +
Preference number: 5 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVALGVVP*WAEYQD
Trigger: ATCTTGGTATTCAGCCCACAAAGGAACAACACCAAG...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CAA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTCAAAATTGCCACGACTaGCTTTATTGGCTCTTCATC +
Preference number: 5 (lower is better)
Translates to: KNVFPKELTGSKIATTCFQNCHD*LYWLFI
Trigger: GATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTG...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CAA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTTCACAGGATCCAAAATaGCCACGACTTGCTTTATTG +
Preference number: 5 (lower is better)
Translates to: KNVFPKELTGSKIATTCFSQDPK*PRLALL
Trigger: CAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGA...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS GCA 90 bp TCCAAGAAGAATGAGAATTTAAATATAGTAACTAGTTTGTTAAACTaGTGGGGTTGTCCTTCAAATTTGGGTCTGAGCTTCCTACCAACC +
Preference number: 5 (lower is better)
Translates to: SKKNENLNIVTSLLN*WGCPSNLGLSFLPT
Trigger: GGTTGGTAGGAAGCTCAGACCCAAATTTGAAGGACAACCCCAGCAGTTTAACAAACTAGTTACTATATTTAAATTCTCATTCTTCTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464340.5
CDS-3UTR CAA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCAGATTCTAACCTCAACTaGGCTCCGGTAATTATGCTT +
Preference number: 5 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVADSNLN*APVIML
Trigger: AAGCATAATTACCGGAGCCAAGTTGAGGTTAGAATC...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405898.5
CDS-3UTR CAA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTTCATCTCTTTCACACTaGAGCCTTTCCATTTCATCT +
Preference number: 5 (lower is better)
Translates to: KNVFPKELTGSKIATTCFSSLSH*SLSISS
Trigger: AGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGA...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CAA 90 bp ATTTCTTATTCCTCCAATACGTGTGTGTGTGTGTGTGTGTGGTGTGTATATACATATTTCTTCAGAACCTaGGGCAAATCAACAATGTGT +
Preference number: 5 (lower is better)
Translates to: ISYSSNTCVCVCVWCVYTYFFRT*GKSTMC
Trigger: ACACATTGTTGATTTGCCCAAGGTTCTGAAGAAATA...TGTATATACACACCACACACACACACACACACACGTATTGGAGGAATAAGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS-3UTR CAA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCACCACGACTTGCTTTATaGGCTCTTCATCTAATTCTG +
Preference number: 5 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVAPRLAL*ALHLIL
Trigger: CAGAATTAGATGAAGAGCCAATAAAGCAAGTCGTGG...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CAA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCACAAAATTGCCACGACTaGCTTTATTGGCTCTTCATC +
Preference number: 5 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVAQNCHD*LYWLFI
Trigger: GATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTG...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS-3UTR CAA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCAAACCTAGTACTCAACTaGGCTCCGGTAATTATGCTT +
Preference number: 5 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVANLVLN*APVIML
Trigger: AAGCATAATTACCGGAGCCAAGTTGAGTACTAGGTT...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398391.6
CDS-3UTR CAA 90 bp AAAAATGTATTTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTATGTCATTATTTGTTTaGGGAGTGGATGAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: KNVFPKELTGSKIATTCFMSLFV*GVDEVF
Trigger: AAAGACCTCATCCACTCCCAAAACAAATAATGACAT...AAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS CCA 90 bp AAGAAGAATGAGAATTTAAATATAGTAACTAGTTTGTTAAACTGCTaGGGTTGTCCTTCAAATTTGGGTCTGAGCTTCCTACCAACCAAA +
Preference number: 5 (lower is better)
Translates to: KKNENLNIVTSLLNC*GCPSNLGLSFLPTK
Trigger: TTTGGTTGGTAGGAAGCTCAGACCCAAATTTGAAGGACAACCCCAGCAGTTTAACAAACTAGTTACTATATTTAAATTCTCATTCTTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464340.5
CDS-3UTR CAA 90 bp TATTTGCAACAATGGCTTCCTCTAGAGGTTGAGATTATAAAAACTAAGGTAGCAATGTCATTATTTGTTTaGGGAGTGGATGAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: YLQQWLPLEVEIIKTKVAMSLFV*GVDEVF
Trigger: AAAGACCTCATCCACTCCCAAAACAAATAATGACAT...TGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS CCA 72 bp TTTAACAAGTTCCTTAGATTCAAGCGCCAGCGTTGCTaGGATGCTACGTCCATTCCTTCCCAGTGGTGTGAG +
Preference number: 6 (lower is better)
Translates to: FNKFLRFKRQRC*DATSIPSQWCE
Trigger: CTCACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS GCA 72 bp AGATTTAACAAGTTCCTTAGATTCAAGCGCCAGCGTTaGTGGGATGCTACGTCCATTCCTTCCCAGTGGTGT +
Preference number: 6 (lower is better)
Translates to: RFNKFLRFKRQR*WDATSIPSQWC
Trigger: ACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS CAA 90 bp GTCTCTGAGCAGCTTCAGCAAGATGAATCCGACTACGCAGGGCTCTaGTTTCTTCAACTACAGCTTTGGCTTCTTGTTTCACATTCTGGA +
Preference number: 6 (lower is better)
Translates to: VSEQLQQDESDYAGL*FLQLQLWLLVSHSG
Trigger: TCCAGAATGTGAAACAAGAAGCCAAAGCTGTAGTTGAAGAAACAAGAGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS TCA 72 bp AGGCCAAGGCCTGTTTCCTTGGCAATTGTAATCATCTaGAAGGCAGGATCCTTTTCAAGTAGACTGGGTGAT +
Preference number: 6 (lower is better)
Translates to: RPRPVSLAIVII*KAGSFSSRLGD
Trigger: ATCACCCAGTCTACTTGAAAAGGATCCTGCCTTTCAGATGATTACAATTGCCAAGGAAACAGGCCTTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376352.6
ENST00000405898.5
ENST00000434978.6
ENST00000461444.5
ENST00000464340.5
CDS CAA 72 bp CAGCTTCAGCAAGATGAATCCGACTACGCAGGGCTCTaGTTTCTTCAACTACAGCTTTGGCTTCTTGTTTCA +
Preference number: 6 (lower is better)
Translates to: QLQQDESDYAGL*FLQLQLWLLVS
Trigger: TGAAACAAGAAGCCAAAGCTGTAGTTGAAGAAACAAGAGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS CAA 72 bp AACTCACAGGATCCAAAATTGCCACGACTTGCTTTATaGGCTCTTCATCTAATTCTGCCCTGGCCACTTAAG +
Preference number: 6 (lower is better)
Translates to: NSQDPKLPRLAL*ALHLILPWPLK
Trigger: CTTAAGTGGCCAGGGCAGAATTAGATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS CAA 72 bp ACTAGTTTGTTAAACTGCTGGGGTTGTCCTTCAAATTaGGGTCTGAGCTTCCTACCAACCAAAGTGAAAGGG +
Preference number: 6 (lower is better)
Translates to: TSLLNCWGCPSN*GLSFLPTKVKG
Trigger: CCCTTTCACTTTGGTTGGTAGGAAGCTCAGACCCAAATTTGAAGGACAACCCCAGCAGTTTAACAAACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464340.5
CDS CAA 72 bp CTTGTACTTGCTGTCTCAGGGCTTGGTGTTGTTCCTTaGTGGGCTGAATACCAAGATAATTTAGAGCCTGTA +
Preference number: 6 (lower is better)
Translates to: LVLAVSGLGVVP*WAEYQDNLEPV
Trigger: TACAGGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS CAA 90 bp TTGAGTCTGCTTGTACTTGCTGTCTCAGGGCTTGGTGTTGTTCCTTaGTGGGCTGAATACCAAGATAATTTAGAGCCATTTCCAGTTTCT +
Preference number: 6 (lower is better)
Translates to: LSLLVLAVSGLGVVP*WAEYQDNLEPFPVS
Trigger: AGAAACTGGAAATGGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376352.6
ENST00000398391.6
ENST00000405898.5
ENST00000434978.6
CDS CAA 72 bp CTTGTACTTGCTGTCTCAGGGCTTGGTGTTGTTCCTTaGTGGGCTGAATACCAAGATAATTTAGAGCCATTT +
Preference number: 6 (lower is better)
Translates to: LVLAVSGLGVVP*WAEYQDNLEPF
Trigger: AAATGGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376352.6
ENST00000398391.6
ENST00000405898.5
ENST00000434978.6
CDS CAA 90 bp TTCCCAAAGAACTCACAGGATCCAAAATTGCCACGACTTGCTTTATaGGCTCTTCATCTAATTCTGCCCTGGCCACTTAAGTGTATTTAC +
Preference number: 6 (lower is better)
Translates to: FPKNSQDPKLPRLAL*ALHLILPWPLKCIY
Trigger: GTAAATACACTTAAGTGGCCAGGGCAGAATTAGATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5
CDS CAA 90 bp TTGAGTCTGCTTGTACTTGCTGTCTCAGGGCTTGGTGTTGTTCCTTaGTGGGCTGAATACCAAGATAATTTAGAGCCTGTATTAGACAAA +
Preference number: 6 (lower is better)
Translates to: LSLLVLAVSGLGVVP*WAEYQDNLEPVLDK
Trigger: TTTGTCTAATACAGGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463234.1
CDS CAA 90 bp AATATAGTAACTAGTTTGTTAAACTGCTGGGGTTGTCCTTCAAATTaGGGTCTGAGCTTCCTACCAACCAAAGTGAAAGGGAGCTCATTA +
Preference number: 6 (lower is better)
Translates to: NIVTSLLNCWGCPSN*GLSFLPTKVKGSSL
Trigger: TAATGAGCTCCCTTTCACTTTGGTTGGTAGGAAGCTCAGACCCAAATTTGAAGGACAACCCCAGCAGTTTAACAAACTAGTTACTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464340.5
CDS TCA 72 bp ACACCAATCATAGATTCCTTGTTGACTGAGACAAGTTaGTCTCCTGGCTTCAAACGACCATCTTTTCAAGTA +
Preference number: 6 (lower is better)
Translates to: TPIIDSLLTETS*SPGFKRPSFQV
Trigger: TACTTGAAAAGATGGTCGTTTGAAGCCAGGAGATCAACTTGTCTCAGTCAACAAGGAATCTATGATTGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398391.6
CDS CCA 72 bp ACCAGGATTAAACACCCAAGGGAAGTCAGCTCTTTATaGATTAAGTGCCTATTGAAGATTAGCTTCCTGATT +
Preference number: 6 (lower is better)
Translates to: TRIKHPREVSSL*IKCLLKISFLI
Trigger: AATCAGGAAGCTAATCTTCAATAGGCACTTAATCCATAAAGAGCTGACTTCCCTTGGGTGTTTAATCCTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468837.1
CDS TCA 72 bp GATTTTCTGGCTGAATGTTGTCGGATTTTTGTCTTATaGATGCTATCTCCCAAGCAGATTCTAACCTCAACT +
Preference number: 6 (lower is better)
Translates to: DFLAECCRIFVL*MLSPKQILTST
Trigger: AGTTGAGGTTAGAATCTGCTTGGGAGATAGCATTCATAAGACAAAAATCCGACAACATTCAGCCAGAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376352.6
ENST00000405898.5
ENST00000434978.6
CDS CCA 72 bp TCTTCAACTACAGCTTTGGCTTCTTGTTTCACATTCTaGAGCTCTTCTGTCAATTGTTTCCTTTGCTTATCT +
Preference number: 6 (lower is better)
Translates to: SSTTALASCFTF*SSSVNCFLCLS
Trigger: AGATAAGCAAAGGAAACAATTGACAGAAGAGCTCCAGAATGTGAAACAAGAAGCCAAAGCTGTAGTTGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376352.6
CDS CAA 72 bp CCAAGGGAAGTCAGCTCTTTATGGATTAAGTGCCTATaGAAGATTAGCTTCCTGATTTTACTACTACCTCAT +
Preference number: 6 (lower is better)
Translates to: PREVSSLWIKCL*KISFLILLLPH
Trigger: ATGAGGTAGTAGTAAAATCAGGAAGCTAATCTTCAATAGGCACTTAATCCATAAAGAGCTGACTTCCCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468837.1
CDS CAA 90 bp TCCTTAAGTGTATTTACTTCTTTCAAGGCATCATCTCTTTCACACTaGAGCCTTTCCATTTCATCTGCTTCTGAAGAATCACAAGGAAGA +
Preference number: 6 (lower is better)
Translates to: SLSVFTSFKASSLSH*SLSISSASEESQGR
Trigger: TCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376352.6
ENST00000434978.6
CDS CAA 90 bp CACTTAAGTGTATTTACTTCTTTCAAGGCATCATCTCTTTCACACTaGAGCCTTTCCATTTCATCTGCTTCTGAAGAATCACAAGGAAGA +
Preference number: 6 (lower is better)
Translates to: HLSVFTSFKASSLSH*SLSISSASEESQGR
Trigger: TCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398391.6
ENST00000405898.5