RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STXBP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000076944

Ensembl transcript IDs: ENST00000221283.10, ENST00000414284.6, ENST00000441779.6, ENST00000593535.5, ENST00000593854.5, ENST00000594221.5, ENST00000595181.5, ENST00000595800.1, ENST00000595861.1, ENST00000595950.5, ENST00000597068.5, ENST00000597467.1, ENST00000599400.1, ENST00000599558.1, ENST00000599648.1, ENST00000599737.5, ENST00000599905.1, ENST00000601061.1, ENST00000612033.1

Found 289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGTCCTCCACGGCGTCCCCGGGGTTGGTGACAGTGCCTCCCAGCTaGTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCA +
Preference number: 1 (lower is better)
Translates to: RSSTASPGLVTVPPS*SRLRMRLLCACTLA
Trigger: TGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCACCAACCCCGGGGACGCCGTGGAGGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR GCA 90 bp TCCCGCGCCTCGCTCAGCCCGGTGGTCTCATACCTGTATGTGTCCTaGTCTATGTCCAGCAGATCATACGCCATGGCCTGGAACGTGAGC +
Preference number: 1 (lower is better)
Translates to: SRASLSPVVSYLYVS*SMSSRSYAMAWNVS
Trigger: GCTCACGTTCCAGGCCATGGCGTATGATCTGCTGGACATAGAGCAGGACACATACAGGTATGAGACCACCGGGCTGAGCGAGGCGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR GCA 90 bp GTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTaGGCCTGTACATTGGCATGCTGGATCAGCTTGGCCAGGTTCTCC +
Preference number: 1 (lower is better)
Translates to: VTVPPSCSRLRMRLL*ACTLACWISLARFS
Trigger: GGAGAACCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
3UTR GCA 90 bp TGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATaGTGGATCAGCTTGGCCAGGTTCTCCTCACTCACACCATTCCGA +
Preference number: 1 (lower is better)
Translates to: CSRLRMRLLCACTLA*WISLARFSSLTPFR
Trigger: TCGGAATGGTGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR CCA 90 bp TCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTaGATCAGCTTGGCCAGGTTCTCCTCACTCACACCATTCCGAAGG +
Preference number: 1 (lower is better)
Translates to: SRLRMRLLCACTLAC*ISLARFSSLTPFRR
Trigger: CCTTCGGAATGGTGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR GCA 90 bp AGGTCCTGCTCCACACTACACAGCTTCTCCACCGAGCCCTTGAAGTaGTTCATACAATCATCTGCTAGATGCAGGTGCGTAGAATACTTA +
Preference number: 1 (lower is better)
Translates to: RSCSTLHSFSTEPLK*FIQSSARCRCVEYL
Trigger: TAAGTATTCTACGCACCTGCATCTAGCAGATGATTGTATGAAGCACTTCAAGGGCTCGGTGGAGAAGCTGTGTAGTGTGGAGCAGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR-3UTR CCA 90 bp TGGGAGCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCCTGCGTCGGAGCCCATaGCCAGGTCCTGCTCCACAC +
Preference number: 2 (lower is better)
Translates to: WELAVGAGSDTKGHRFLSLRRSP*PGPAPH
Trigger: GTGTGGAGCAGGACCTGGCCATGGGCTCCGACGCAG...GGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGCTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR-3UTR CCA 90 bp TACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCCCTGGGAGCTGGCCGTaGGGGCGGGGTCGGATACGA +
Preference number: 2 (lower is better)
Translates to: YTMSRGPARASMPALFLCPGSWP*GRGRIR
Trigger: TCGTATCCGACCCCGCCCCCACGGCCAGCTCCCAGG...GCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
3UTR-3UTR GCA 90 bp CTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGGACACATCTGCGATATaGATGTGGCGAAGCTCCACC +
Preference number: 2 (lower is better)
Translates to: LAVGAGSDTKGHRFLSSRDTSAI*MWRSST
Trigger: GGTGGAGCTTCGCCACATGCATATCGCAGATGTGTC...CCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR-3UTR GCA 90 bp ACTTGCCCTCGGTGGCCCTGGTCACCTCGTAGGCGGCCCTCATCTCTGACATGGCCGCCCGGGCTTCTATaGCAGCCTTGTTCTTGTGCC +
Preference number: 2 (lower is better)
Translates to: TCPRWPWSPRRRPSSLTWPPGLL*QPCSCA
Trigger: GGCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGG...CCATGTCAGAGATGAGGGCCGCCTACGAGGTGACCAGGGCCACCGAGGGCAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
3UTR-3UTR CCA 90 bp GGAGCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGTCATACGCCATGGCCTaGAACGTGAGCTCATGCAGT +
Preference number: 2 (lower is better)
Translates to: GAGRGGGVGYEGPQVPVQSYAMA*NVSSCS
Trigger: ACTGCATGAGCTCACGTTCCAGGCCATGGCGTATGA...CTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR-3UTR GCA 90 bp TACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCCGGATGAGGCTGCTGTaGGCCTGTACATTGGCATGC +
Preference number: 2 (lower is better)
Translates to: YTMSRGPARASMPALFLCRMRLL*ACTLAC
Trigger: GCATGCCAATGTACAGGCGCACAGCAGCCTCATCCG...GCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
3UTR-3UTR TCA 90 bp CCGCGCCTCGCTCAGCCCGGTGGTCTCATACCTGTATGTGTCCTGCTCTATGTCCCATGGCCTGGAACGTaGGCTCATGCAGTAGTGGGG +
Preference number: 2 (lower is better)
Translates to: PRLAQPGGLIPVCVLLYVPWPGT*AHAVVG
Trigger: CCCCACTACTGCATGAGCTCACGTTCCAGGCCATGG...GACATAGAGCAGGACACATACAGGTATGAGACCACCGGGCTGAGCGAGGCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR-3UTR GCA 90 bp AGGATGTGTGAGGAGCCAATGAGCACCTCCCACTTGCCCTCGGTGGCCCTGGTCTGGAACGTGAGCTCATaGAGTAGTGGGGACACGGGG +
Preference number: 2 (lower is better)
Translates to: RMCEEPMSTSHLPSVALVWNVSS*SSGDTG
Trigger: CCCCGTGTCCCCACTACTGCATGAGCTCACGTTCCA...GACCAGGGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR-3UTR GCA 90 bp TTCAGGTCATCCAGGAAGCGGGTCGGGGTGAGGATGTGTGAGGAGCCAATGAGCGATAGGTGGGCTCCATaGGTTCTCTCGGCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: FRSSRKRVGVRMCEEPMSDRWAP*VLSAPA
Trigger: GGCTGGAGCCGAGAGAACGCATGGAGCCCACCTATC...GCTCATTGGCTCCTCACACATCCTCACCCCGACCCGCTTCCTGGATGACCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597068.5
3UTR CAA 90 bp CCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATaGGCATGCTGGATCAGCTTGGCCAGGTTCTCCTCACTCACACCA +
Preference number: 2 (lower is better)
Translates to: PSCSRLRMRLLCACT*ACWISLARFSSLTP
Trigger: TGGTGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR-3UTR GCA 90 bp ACTTGCCCTCGGTGGCCCTGGTCACCTCGTAGGCGGCCCTCATCTCTGACATGGAGCTCCTTCTGGTACTaGGGCATCTTTTTCAGGATC +
Preference number: 2 (lower is better)
Translates to: TCPRWPWSPRRRPSSLTWSSFWY*GIFFRI
Trigger: GATCCTGAAAAAGATGCCGCAGTACCAGAAGGAGCT...CCATGTCAGAGATGAGGGCCGCCTACGAGGTGACCAGGGCCACCGAGGGCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR-3UTR TCA 90 bp TGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATCGCTTCATGGAGTCCTTaGTCTTCTCCCCCTCTGCGT +
Preference number: 2 (lower is better)
Translates to: CSRLRMRLLCACTLACWIASWSP*SSPPLR
Trigger: ACGCAGAGGGGGAGAAGATCAAGGACTCCATGAAGC...GATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR-3UTR CCA 90 bp TACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCTTATTCAGCTCCTTCTaGTACTGCGGCATCTTTTTC +
Preference number: 2 (lower is better)
Translates to: YTMSRGPARASMPALFLCLFSSF*YCGIFF
Trigger: GAAAAAGATGCCGCAGTACCAGAAGGAGCTGAATAA...GCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR-3UTR GCA 90 bp CACCGCCGCGTCCAGCAGCACCGGAACGATCAGCTTCATGGAGTCCTTGATCTTACCGAGCCCTTGAAGTaGTTCATACAATCATCTGCT +
Preference number: 2 (lower is better)
Translates to: HRRVQQHRNDQLHGVLDLTEPLK*FIQSSA
Trigger: AGCAGATGATTGTATGAAGCACTTCAAGGGCTCGGT...AAGATCAAGGACTCCATGAAGCTGATCGTTCCGGTGCTGCTGGACGCGGCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR-3UTR GCA 90 bp TGGTACTGCGGCATCTTTTTCAGGATCTGGGATAGGTCTTTGATGTTCGCCTTGTACCTGTATGTGTCCTaGTCTATGTCCAGCAGATCA +
Preference number: 2 (lower is better)
Translates to: WYCGIFFRIWDRSLMFALYLYVS*SMSSRS
Trigger: TGATCTGCTGGACATAGAGCAGGACACATACAGGTA...CAAGGCGAACATCAAAGACCTATCCCAGATCCTGAAAAAGATGCCGCAGTACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR GCA 72 bp CCGGGGTCCAGCGGGACAGCTGATAGGTGGGCTCCATaGGTTCTCTCGGCTCCAGCCGGCTGGAGGTCCCCG +
Preference number: 3 (lower is better)
Translates to: PGSSGTADRWAP*VLSAPAGWRSP
Trigger: CGGGGACCTCCAGCCGGCTGGAGCCGAGAGAACGCATGGAGCCCACCTATCAGCTGTCCCGCTGGACCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597068.5
3UTR-3UTR CAA 90 bp AGCCGGTCCTCCACGGCGTCCTCCATTACATCCTTGATGACCGGGGTCCAGCGGCCCGAGCCCCCGGGGTaGGTGACAGTGCCTCCCAGC +
Preference number: 3 (lower is better)
Translates to: SRSSTASSITSLMTGVQRPEPPG*VTVPPS
Trigger: GCTGGGAGGCACTGTCACCAACCCCGGGGGCTCGGG...CCGCTGGACCCCGGTCATCAAGGATGTAATGGAGGACGCCGTGGAGGACCGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597068.5
3UTR-3UTR CAA 90 bp TCCACGGCGTCCCCGGGGTTGGTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGGCATGCTGGATCAGCTaGGCCAGGTTCTCCTCACTC +
Preference number: 3 (lower is better)
Translates to: STASPGLVTVPPSCSRLRACWIS*ARFSSL
Trigger: GAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGC...CCGTAACCTGGAGCAGCTGGGAGGCACTGTCACCAACCCCGGGGACGCCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR GCA 72 bp CCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTaGGCCTGTACATTGGCATGCTGGATCAGCTTGGCC +
Preference number: 3 (lower is better)
Translates to: PPSCSRLRMRLL*ACTLACWISLA
Trigger: GGCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
3UTR-3UTR CAA 90 bp AGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGTCCGTGGTCAGCCTCTaGCTCTCACAGAAGGTCCTC +
Preference number: 3 (lower is better)
Translates to: SCSRLRMRLLCACTLACWSVVSL*LSQKVL
Trigger: GAGGACCTTCTGTGAGAGCAAGAGGCTGACCACGGA...CCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR CCA 72 bp TCCTGCTCTATGTCCAGCAGATCATACGCCATGGCCTaGAACGTGAGCTCATGCAGTAGTGGGGACACGGGG +
Preference number: 3 (lower is better)
Translates to: SCSMSSRSYAMA*NVSSCSSGDTG
Trigger: CCCCGTGTCCCCACTACTGCATGAGCTCACGTTCCAGGCCATGGCGTATGATCTGCTGGACATAGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR-3UTR CAA 90 bp CACCGCCGCGTCCAGCAGCACCGGAACGATCAGCTTCATGGAGTCCTTGATCTTTCTTTGATGTTCGCCTaGTCCGTGGTCAGCCTCTTG +
Preference number: 3 (lower is better)
Translates to: HRRVQQHRNDQLHGVLDLSLMFA*SVVSLL
Trigger: CAAGAGGCTGACCACGGACAAGGCGAACATCAAAGA...AAGATCAAGGACTCCATGAAGCTGATCGTTCCGGTGCTGCTGGACGCGGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR GCA 72 bp TCGCTCAGCCCGGTGGTCTCATACCTGTATGTGTCCTaGTCTATGTCCAGCAGATCATACGCCATGGCCTGG +
Preference number: 3 (lower is better)
Translates to: SLSPVVSYLYVS*SMSSRSYAMAW
Trigger: CCAGGCCATGGCGTATGATCTGCTGGACATAGAGCAGGACACATACAGGTATGAGACCACCGGGCTGAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR GCA 72 bp AGGAGCTCCGTGACCTTCTTGGACACATCTGCGATATaGATGTGGCGAAGCTCCACCCACAAGTCATCGTCC +
Preference number: 3 (lower is better)
Translates to: RSSVTFLDTSAI*MWRSSTHKSSS
Trigger: GGACGATGACTTGTGGGTGGAGCTTCGCCACATGCATATCGCAGATGTGTCCAAGAAGGTCACGGAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR GCA 72 bp TTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATaGTGGATCAGCTTGGCCAGGTTCTCCTCACTCACA +
Preference number: 3 (lower is better)
Translates to: LRMRLLCACTLA*WISLARFSSLT
Trigger: TGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR GCA 72 bp TCCACACTACACAGCTTCTCCACCGAGCCCTTGAAGTaGTTCATACAATCATCTGCTAGATGCAGGTGCGTA +
Preference number: 3 (lower is better)
Translates to: STLHSFSTEPLK*FIQSSARCRCV
Trigger: TACGCACCTGCATCTAGCAGATGATTGTATGAAGCACTTCAAGGGCTCGGTGGAGAAGCTGTGTAGTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR GCA 72 bp AGGTGCGTAGAATACTTATTCAGCTCCTTCTGGTACTaGGGCATCTTTTTCAGGATCTGGGATAGGTCTTTG +
Preference number: 3 (lower is better)
Translates to: RCVEYLFSSFWY*GIFFRIWDRSL
Trigger: CAAAGACCTATCCCAGATCCTGAAAAAGATGCCGCAGTACCAGAAGGAGCTGAATAAGTATTCTACGCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR GCA 72 bp GAGCCCTTGAAGTGCTTCATACAATCATCTGCTAGATaGAGGTGCGTAGAATACTTATTCAGCTCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: EPLKCFIQSSAR*RCVEYLFSSFW
Trigger: CCAGAAGGAGCTGAATAAGTATTCTACGCACCTGCATCTAGCAGATGATTGTATGAAGCACTTCAAGGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR CCA 90 bp GCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGTGCCCTCGGTGGCCCTaGTCACCTCGTAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: AGRGGGVGYEGPQVPVQPCPRWP*SPRRRP
Trigger: GGGCCGCCTACGAGGTGACCAGGGCCACCGAGGGCA...CGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR TCA 90 bp GCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTGGCCCGGGGTTGGTaGCAGTGCCTCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AGRGGGVGYEGPQVPVQPVARGW*QCLPAA
Trigger: AGCAGCTGGGAGGCACTGTCACCAACCCCGGGCCAC...CGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599400.1
CDS-3UTR CCA 90 bp GGAGCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCTGGGAGCTGGCCGTaGGGGCGGGGTCGGATACGA +
Preference number: 4 (lower is better)
Translates to: GAGRGGGVGYEGPQVPVQPGSWP*GRGRIR
Trigger: TCGTATCCGACCCCGCCCCCACGGCCAGCTCCCAGG...CTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR TCA 90 bp GGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCCGTCCCCGGGGTTGGTaGCAGTGCCTCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGVGYEGPQVPVQPVLHGRPRGW*QCLPAA
Trigger: AGCAGCTGGGAGGCACTGTCACCAACCCCGGGGACG...GCCGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR GCA 90 bp CATGGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCCCGCGTGCGCTCCTCTaGCCGGAAGGGGCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: HGHTAHDIHDEPGARPGFPRALL*PEGAVE
Trigger: CTCTACTGCCCCTTCCGGGCAGAGGAGCGCACGCGG...GAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CCA 90 bp GGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCGTCTGCCCTCGGTGGCCCTaGTCACCTCGTAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: GVGYEGPQVPVQPVLHGVCPRWP*SPRRRP
Trigger: GGGCCGCCTACGAGGTGACCAGGGCCACCGAGGGCA...GACGCCGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR GCA 90 bp CTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGGATCTTCTCCCCCTCTaGGTCGGAGCCCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: LAVGAGSDTKGHRFLSSRDLLPL*VGAHGQ
Trigger: CTGGCCATGGGCTCCGACGCAGAGGGGGAGAAGATC...CCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp GGAGCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCCACTTGCCCTCGGTaGCCCTGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: GAGRGGGVGYEGPQVPVQPTCPR*PWSPRR
Trigger: CCTACGAGGTGACCAGGGCCACCGAGGGCAAGTGGG...CTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp ACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCCAGCAGAGGGGCTGCGCCTaGTGTGGCCCGGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: TMSRGPARASMPALFLCQQRGCA*CGPGLV
Trigger: CACCAACCCCGGGCCACACCAGGCGCAGCCCCTCTG...CTGGCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599400.1
CDS-3UTR TCA 90 bp GCAGCAGGACCCGGATCTTGTCGTAGGCGGGCACCGCCGCGTCCAGCAGCACCGGCTCCAGGTTACGGATaGGGCTGCTGTGCGCCTGTA +
Preference number: 4 (lower is better)
Translates to: AAGPGSCRRRAPPRPAAPAPGYG*GCCAPV
Trigger: TACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGC...CGGTGCTGCTGGACGCGGCGGTGCCCGCCTACGACAAGATCCGGGTCCTGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR TCA 90 bp GGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCGGAAGCGGGTCGGGGTaGGGATGTGTGAGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: GGVGYEGPQVPVQPVLHGGSGSG*GCVRSQ
Trigger: TTGGCTCCTCACACATCCTCACCCCGACCCGCTTCC...GCCGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR TCA 90 bp TGGGAGCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCGGAAGCGGGTCGGGGTaGGGATGTGTGAGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: WELAVGAGSDTKGHRFLSGSGSG*GCVRSQ
Trigger: TTGGCTCCTCACACATCCTCACCCCGACCCGCTTCC...GGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR TCA 90 bp GGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGGAAGCGGGTCGGGGTaGGGATGTGTGAGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: GAGSDTKGHRFLSSRSSTGSGSG*GCVRSQ
Trigger: TTGGCTCCTCACACATCCTCACCCCGACCCGCTTCC...CGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR GCA 90 bp GGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCGTCTGTCCTCTGGGCCCTTaGGGTAGCGGATGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: GVGYEGPQVPVQPVLHGVCPLGP*GSGWPG
Trigger: ACCCGGCCATCCGCTACCGCAAGGGCCCAGAGGACA...GACGCCGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CCA 90 bp GGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATCTGCGTCGGAGCCCATaGCCAGGTCCTGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: GHTAHDIHDEPGARPGFYLRRSP*PGPAPH
Trigger: GTGTGGAGCAGGACCTGGCCATGGGCTCCGACGCAG...ATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp GCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCCAGTGACCGACCCACTTGCCCTCGGTaGCCCTGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: AGGPPGLLCQPCSCASDRPTCPR*PWSPRR
Trigger: CCTACGAGGTGACCAGGGCCACCGAGGGCAAGTGGG...TCGGTCACTGGCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR TCA 90 bp GGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCCCATGGCCTGGAACGTaGGCTCATGCAGTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGVGYEGPQVPVQPVLHGPWPGT*AHAVVG
Trigger: CCCCACTACTGCATGAGCTCACGTTCCAGGCCATGG...GCCGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp GGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCTCCAGGTTACGGATaGGGCTGCTGTGCGCCTGTA +
Preference number: 4 (lower is better)
Translates to: GAGSDTKGHRFLSSRSSTAPGYG*GCCAPV
Trigger: TACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGC...CGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR TCA 90 bp CCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCGCTCCAGGTTACGGATaGGGCTGCTGTGCGCCTGTA +
Preference number: 4 (lower is better)
Translates to: PPMTYTMSRGPARASMPAAPGYG*GCCAPV
Trigger: TACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGC...GGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR TCA 90 bp GTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCCGGGGTGAGGATGTGTaGGGAGCCAATGAGCACCTC +
Preference number: 4 (lower is better)
Translates to: VGAGSDTKGHRFLSSRSSRGEDV*GANEHL
Trigger: GAGGTGCTCATTGGCTCCTCACACATCCTCACCCCG...GGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR TCA 90 bp GGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGCGGGGTGAGGATGTGTaGGGAGCCAATGAGCACCTC +
Preference number: 4 (lower is better)
Translates to: GAGSDTKGHRFLSSRSSTRGEDV*GANEHL
Trigger: GAGGTGCTCATTGGCTCCTCACACATCCTCACCCCG...CGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR GCA 90 bp GTGAGGATGTGTGAGGAGCCAATGAGCACCTCCCACTTGCCCTCGGTGGCCCTGGCCAGCACCTCGAGCTaGCGCGTGCGCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VRMCEEPMSTSHLPSVALASTSS*RVRSSA
Trigger: GGCAGAGGAGCGCACGCGGCAGCTCGAGGTGCTGGC...CAGGGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACATCCTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR GCA 90 bp GGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGCCGCCCGGGCTTCTATaGCAGCCTTGTTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: GAGSDTKGHRFLSSRSSTPPGLL*QPCSCA
Trigger: GGCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGG...CGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR GCA 90 bp GACATGGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTCCGCCCGGGCTTCTATaGCAGCCTTGTTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: DMATPPMTYTMSRGPARAPPGLL*QPCSCA
Trigger: GGCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGG...AGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCATGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp CGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCGGTACTCCTGCAGGGTaGCGCACAGCGTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: RGGGVGYEGPQVPVQPVLGTPAG*RTAWQS
Trigger: AGATTGCCACGCTGTGCGCCACCCTGCAGGAGTACC...GAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CCA 90 bp CCCGAGCCCCCGGGGTTGGTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGCTGGGCTGTGTCCTCTaGGCCCTTGCGGTAGCGGAT +
Preference number: 4 (lower is better)
Translates to: PEPPGLVTVPPSCSRLRMLGCVL*ALAVAD
Trigger: ATCCGCTACCGCAAGGGCCCAGAGGACACAGCCCAG...CATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCACCAACCCCGGGGGCTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR TCA 90 bp CTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCCCTGGAAGTCTTTaGTCAGGGCCTGAACCGACT +
Preference number: 4 (lower is better)
Translates to: LAVGAGSDTKGHRFLSSRSPGSL*SGPEPT
Trigger: AGTCGGTTCAGGCCCTGATCAAAGACTTCCAGGGGA...CCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp GTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTAGCGGCCTAGCTCACTaGACAGGGGCTCGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VTVPPSCSRLRMRLLCACSGLAH*TGARGR
Trigger: CCTGCCCCGAGCCCCTGTTCAGTGAGCTAGGCCGCT...ACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp CATGGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTGGGAGTGTCTGCCTTaGAGGCGTTCAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: HGHTAHDIHDEPGARPGFWECLP*RRSAWP
Trigger: TGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCA...GAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp GCAGCAGGACCCGGATCTTGTCGTAGGCGGGCACCGCCGCGTCCAGCAGCACCGGCTTCATGGAGTCCTTaGTCTTCTCCCCCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: AAGPGSCRRRAPPRPAAPASWSP*SSPPLR
Trigger: ACGCAGAGGGGGAGAAGATCAAGGACTCCATGAAGC...CGGTGCTGCTGGACGCGGCGGTGCCCGCCTACGACAAGATCCGGGTCCTGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR TCA 90 bp GTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTAGCCCCCGGGGTTGGTaGCAGTGCCTCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VTVPPSCSRLRMRLLCACSPRGW*QCLPAA
Trigger: AGCAGCTGGGAGGCACTGTCACCAACCCCGGGGGCT...ACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR TCA 90 bp GTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCTGTGTGAGGAGCCAATaGGCACCTCCCACTTGCCCT +
Preference number: 4 (lower is better)
Translates to: VGAGSDTKGHRFLSSRSSCVRSQ*APPTCP
Trigger: AGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACA...GGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR TCA 90 bp GGGGTGAGGATGTGTGAGGAGCCAATGAGCACCTCCCACTTGCCCTCGGTGGCCGGGCAGCAGGGGGATTaGGGGGAAGGAGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GVRMCEEPMSTSHLPSVAGQQGD*GEGGWS
Trigger: TGACCAGCCTCCTTCCCCTCAATCCCCCTGCTGCCC...GGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACATCCTCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000599400.1
CDS-3UTR GCA 90 bp GCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGCCTGTACATTGGCATaGTGGATCAGCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGRGGGVGYEGPQVPVQPACTLA*WISLAR
Trigger: CCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGC...CGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR GCA 90 bp GGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCACAGTGCCTCCCAGCTaGTCCAGGTTACGGATGAGG +
Preference number: 4 (lower is better)
Translates to: GGVGYEGPQVPVQPVLHGTVPPS*SRLRMR
Trigger: CCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGT...GCCGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR GCA 90 bp CATGGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCACAGTGCCTCCCAGCTaGTCCAGGTTACGGATGAGG +
Preference number: 4 (lower is better)
Translates to: HGHTAHDIHDEPGARPGFTVPPS*SRLRMR
Trigger: CCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGT...GAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp AGCCGGTCCTCCACGGCGTCCTCCATTACATCCTTGATGACCGGGGTCCAGCGGTTGGCCAGGACGGCGTaGGCCAACTGGGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SRSSTASSITSLMTGVQRLARTA*ANWAVS
Trigger: GGACACAGCCCAGTTGGCCCACGCCGTCCTGGCCAA...CCGCTGGACCCCGGTCATCAAGGATGTAATGGAGGACGCCGTGGAGGACCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CCA 90 bp GACATGGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTGGGACAGCTGATAGGTaGGCTCCATGCGTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: DMATPPMTYTMSRGPARAGTADR*APCVLS
Trigger: CGAGAGAACGCATGGAGCCCACCTATCAGCTGTCCC...AGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCATGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599400.1
CDS-3UTR CCA 90 bp CTTGATGACCGGGGTCCAGCGGGACAGCTGATAGGTGGGCTCCATGCGTTCTCTCCTGGGAGCTGGCCGTaGGGGCGGGGTCGGATACGA +
Preference number: 4 (lower is better)
Translates to: LDDRGPAGQLIGGLHAFSPGSWP*GRGRIR
Trigger: TCGTATCCGACCCCGCCCCCACGGCCAGCTCCCAGG...AGAGAACGCATGGAGCCCACCTATCAGCTGTCCCGCTGGACCCCGGTCATCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CCA 90 bp GTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTCTGGGCTGTGTCCTCTaGGCCCCTGGGCCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: VTVPPSCSRLRMRLLCACLGCVL*APGPRR
Trigger: CCTACGAGGCCCAGGGGCCCAGAGGACACAGCCCAG...ACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR TCA 90 bp ACTTGCCCTCGGTGGCCCTGGTCACCTCGTAGGCGGCCCTCATCTCTGACATGGGGGCCGCTTTGTAGGTaGAAGTCGGGGTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: TCPRWPWSPRRRPSSLTWGPLCR*KSGSPG
Trigger: TCCAGGGGACCCCGACTTTCACCTACAAAGCGGCCC...CCATGTCAGAGATGAGGGCCGCCTACGAGGTGACCAGGGCCACCGAGGGCAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp GGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCGTCTGGGAGTGTCTGCCTTaGAGGCGTTCAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GVGYEGPQVPVQPVLHGVWECLP*RRSAWP
Trigger: TGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCA...GACGCCGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp GATGTAGAGCAGCAGGACCCGGATCTTGTCGTAGGCGGGCACCGCCGCGTCCAGCCATGGCCTGGAACGTaGGCTCATGCAGTAGTGGGG +
Preference number: 4 (lower is better)
Translates to: DVEQQDPDLVVGGHRRVQPWPGT*AHAVVG
Trigger: CCCCACTACTGCATGAGCTCACGTTCCAGGCCATGG...CTGGACGCGGCGGTGCCCGCCTACGACAAGATCCGGGTCCTGCTGCTCTACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR TCA 90 bp GGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCTTCATGGAGTCCTTaGTCTTCTCCCCCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: GAGSDTKGHRFLSSRSSTASWSP*SSPPLR
Trigger: ACGCAGAGGGGGAGAAGATCAAGGACTCCATGAAGC...CGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR TCA 90 bp GACATGGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTTGTTCTTGTGCCAGTaGCCGAAGCGGGCACTGACA +
Preference number: 4 (lower is better)
Translates to: DMATPPMTYTMSRGPARALFLCQ*PKRALT
Trigger: TGTCAGTGCCCGCTTCGGTCACTGGCACAAGAACAA...AGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCATGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR TCA 90 bp CGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCGTTGTGTGAGGAGCCAATaGGCACCTCCCACTTGCCCT +
Preference number: 4 (lower is better)
Translates to: RGRIRRATGSCPAGPPRRCVRSQ*APPTCP
Trigger: AGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACA...ACGCCGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR GCA 90 bp TTCAGGTCATCCAGGAAGCGGGTCGGGGTGAGGATGTGTGAGGAGCCAATGAGCCCTCGAGCTGCCGCGTaGGCTCCTCTGCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: FRSSRKRVGVRMCEEPMSPRAAA*APLPGR
Trigger: CCTTCCGGGCAGAGGAGCGCACGCGGCAGCTCGAGG...GCTCATTGGCTCCTCACACATCCTCACCCCGACCCGCTTCCTGGATGACCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR GCA 90 bp GCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCCAGTGACCGAACAGTGCCTCCCAGCTaGTCCAGGTTACGGATGAGG +
Preference number: 4 (lower is better)
Translates to: AGGPPGLLCQPCSCASDRTVPPS*SRLRMR
Trigger: CCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGT...TCGGTCACTGGCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR GCA 90 bp GACCGGGGTCCAGCGGGACAGCTGATAGGTGGGCTCCATGCGTTCTCTCGGCTCCCGCCCGGGCTTCTATaGCAGCCTTGTTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: DRGPAGQLIGGLHAFSRLPPGLL*QPCSCA
Trigger: GGCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGG...GAGCCGAGAGAACGCATGGAGCCCACCTATCAGCTGTCCCGCTGGACCCCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CCA 90 bp CGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCAAAGTCGGGGTCCCCTaGAAGTCTTTGATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RGGGVGYEGPQVPVQPVLKVGVP*KSLIRA
Trigger: GGCCCTGATCAAAGACTTCCAGGGGACCCCGACTTT...GAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp GACATGGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTCCTCGCTCAGCCCGGTaGTCTCATACCTGTATGTGT +
Preference number: 4 (lower is better)
Translates to: DMATPPMTYTMSRGPARAPRSAR*SHTCMC
Trigger: ACACATACAGGTATGAGACCACCGGGCTGAGCGAGG...AGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCATGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp CTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTGTGCGCCTGTACATTaGCATGCTGGATCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LAVGAGSDTKGHRFLSSRCAPVH*HAGSAW
Trigger: CCAAGCTGATCCAGCATGCCAATGTACAGGCGCACA...CCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR TCA 90 bp AGCCGGTCCTCCACGGCGTCCTCCATTACATCCTTGATGACCGGGGTCCAGCGGCGGGGCAGGTGTCGGTaGAGAAGATATGGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: SRSSTASSITSLMTGVQRRGRCR*RRYGPL
Trigger: AAGCGGCCCATATCTTCTTCACCGACACCTGCCCCG...CCGCTGGACCCCGGTCATCAAGGATGTAATGGAGGACGCCGTGGAGGACCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR TCA 90 bp CCCGAGCCCCCGGGGTTGGTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGTCCTCAGGAGCTCCGTaGCCTTCTTGGACACATCTG +
Preference number: 4 (lower is better)
Translates to: PEPPGLVTVPPSCSRLRMSSGAP*PSWTHL
Trigger: CAGATGTGTCCAAGAAGGTCACGGAGCTCCTGAGGA...CATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCACCAACCCCGGGGGCTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR GCA 90 bp GCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGAGCAGGAAGACAAGATaGGCATGCTTGGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: AGRGGGVGYEGPQVPVQPSRKTR*ACLGDP
Trigger: TGGATCACCCAAGCATGCGCATCTTGTCTTCCTGCT...CGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp GGAGCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGGACACATCTGCGATATaGATGTGGCGAAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: GAGRGGGVGYEGPQVPVQDTSAI*MWRSST
Trigger: GGTGGAGCTTCGCCACATGCATATCGCAGATGTGTC...CTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp GCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCCAGTGACCGACCGTGGTCAGCCTCTTaGTCTCACAGAAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: AGGPPGLLCQPCSCASDRPWSAS*SHRRSS
Trigger: TGAGGACCTTCTGTGAGAGCAAGAGGCTGACCACGG...TCGGTCACTGGCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp CCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGCGGATGAGGCTGCTGTaGGCCTGTACATTGGCATGC +
Preference number: 4 (lower is better)
Translates to: PMTYTMSRGPARASMPALRMRLL*ACTLAC
Trigger: GCATGCCAATGTACAGGCGCACAGCAGCCTCATCCG...CAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR GCA 90 bp GGGGTGAGGATGTGTGAGGAGCCAATGAGCACCTCCCACTTGCCCTCGGTGGCCGATAGGTGGGCTCCATaGGTTCTCTCGGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GVRMCEEPMSTSHLPSVADRWAP*VLSAPA
Trigger: GGCTGGAGCCGAGAGAACGCATGGAGCCCACCTATC...GGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACATCCTCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599400.1
CDS-3UTR GCA 90 bp TCAGGGCAGGGCAATGTCCTCCAGCTTCTTGTCCAGTGCCTTCAGGTCATCCAGTGGTCACAGAGGGGCTaGGCCTGGTGTGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SGQGNVLQLLVQCLQVIQWSQRG*AWCGPG
Trigger: CCCCGGGCCACACCAGGCGCAGCCCCTCTGTGACCA...CTGGATGACCTGAAGGCACTGGACAAGAAGCTGGAGGACATTGCCCTGCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599400.1
CDS-3UTR CCA 90 bp CTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGGAACCGACTTCTCCGTaGGGCTCAGCAAATAAATGG +
Preference number: 4 (lower is better)
Translates to: LAVGAGSDTKGHRFLSSREPTSP*GSANKW
Trigger: CCATTTATTTGCTGAGCCCCACGGAGAAGTCGGTTC...CCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp CCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTCCATTATCAGCAGCTaGGAGCGGGTTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PPMTYTMSRGPARASMPASIISS*ERVFSG
Trigger: CCCAGAGAAAACCCGCTCCCAGCTGCTGATAATGGA...GGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp TGGGAGCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCTCTGCGATATGCATGTaGCGAAGCTCCACCCACAAG +
Preference number: 4 (lower is better)
Translates to: WELAVGAGSDTKGHRFLSSAICM*RSSTHK
Trigger: CTTGTGGGTGGAGCTTCGCCACATGCATATCGCAGA...GGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp GCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCCAGTGACCGATGTTCGCCTTGTCCGTaGTCAGCCTCTTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: AGGPPGLLCQPCSCASDRCSPCP*SASCSH
Trigger: GTGAGAGCAAGAGGCTGACCACGGACAAGGCGAACA...TCGGTCACTGGCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp CCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCCATGCTGGATCAGCTTaGCCAGGTTCTCCTCACTCA +
Preference number: 4 (lower is better)
Translates to: PPMTYTMSRGPARASMPAHAGSA*PGSPHS
Trigger: TGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATG...GGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp CAGGACCCGGATCTTGTCGTAGGCGGGCACCGCCGCGTCCAGCAGCACCGGAACCATGCTGGATCAGCTTaGCCAGGTTCTCCTCACTCA +
Preference number: 4 (lower is better)
Translates to: QDPDLVVGGHRRVQQHRNHAGSA*PGSPHS
Trigger: TGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATG...GTTCCGGTGCTGCTGGACGCGGCGGTGCCCGCCTACGACAAGATCCGGGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR CCA 90 bp TTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATCAGCTTGGCCCCTGGGAGCTGGCCGTaGGGGCGGGGTCGGATACGA +
Preference number: 4 (lower is better)
Translates to: LRMRLLCACTLACWISLAPGSWP*GRGRIR
Trigger: TCGTATCCGACCCCGCCCCCACGGCCAGCTCCCAGG...GGCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp CTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATTGCCCTCGGTGGCCCTaGTCACCTCGTAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LLQVTDEAAVRLYIGMLDCPRWP*SPRRRP
Trigger: GGGCCGCCTACGAGGTGACCAGGGCCACCGAGGGCA...ATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp CTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCACTCACACCTCAGTaGAGGAATCCCCAAGCCAAT +
Preference number: 4 (lower is better)
Translates to: LAVGAGSDTKGHRFLSSRSLTPQ*RNPQAN
Trigger: ATTGGCTTGGGGATTCCTCCACTGAGGTGTGAGTGA...CCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR TCA 90 bp GCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGCTCAGCCAGGATATCTaGCATTTTGCAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: AGRGGGVGYEGPQVPVQPLSQDI*HFAAGR
Trigger: TCTTCCTGCTGCAAAATGTCAGATATCCTGGCTGAG...CGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp GACCGGGGTCCAGCGGGACAGCTGATAGGTGGGCTCCATGCGTTCTCTCGGCTCTCCCCTGGAAGTCTTTaGTCAGGGCCTGAACCGACT +
Preference number: 4 (lower is better)
Translates to: DRGPAGQLIGGLHAFSRLSPGSL*SGPEPT
Trigger: AGTCGGTTCAGGCCCTGATCAAAGACTTCCAGGGGA...GAGCCGAGAGAACGCATGGAGCCCACCTATCAGCTGTCCCGCTGGACCCCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR TCA 90 bp AGGATGTGTGAGGAGCCAATGAGCACCTCCCACTTGCCCTCGGTGGCCCTGGTCCGGGGCAGGTGTCGGTaGAGAAGATATGGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: RMCEEPMSTSHLPSVALVRGRCR*RRYGPL
Trigger: AAGCGGCCCATATCTTCTTCACCGACACCTGCCCCG...GACCAGGGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp TCAGGGCAGGGCAATGTCCTCCAGCTTCTTGTCCAGTGCCTTCAGGTCATCCAGAGCGGCCTAGCTCACTaGACAGGGGCTCGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGQGNVLQLLVQCLQVIQSGLAH*TGARGR
Trigger: CCTGCCCCGAGCCCCTGTTCAGTGAGCTAGGCCGCT...CTGGATGACCTGAAGGCACTGGACAAGAAGCTGGAGGACATTGCCCTGCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp AGGATGTGTGAGGAGCCAATGAGCACCTCCCACTTGCCCTCGGTGGCCCTGGTCCGGGGTGAGGATGTGTaGGGAGCCAATGAGCACCTC +
Preference number: 4 (lower is better)
Translates to: RMCEEPMSTSHLPSVALVRGEDV*GANEHL
Trigger: GAGGTGCTCATTGGCTCCTCACACATCCTCACCCCG...GACCAGGGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR GCA 90 bp CCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGAGTAGAGGTTGTAGGTaGTGTGGGGAGCATCGAGGG +
Preference number: 4 (lower is better)
Translates to: PMTYTMSRGPARASMPALSRGCR*CGEHRG
Trigger: CCCTCGATGCTCCCCACAGCACCTACAACCTCTACT...CAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR GCA 90 bp TCATCCAGGAAGCGGGTCGGGGTGAGGATGTGTGAGGAGCCAATGAGCACCTCCCACAGCGTGGCAATCTaGTGGGCCAGCACCTCGAGC +
Preference number: 4 (lower is better)
Translates to: SSRKRVGVRMCEEPMSTSHSVAI*WASTSS
Trigger: GCTCGAGGTGCTGGCCCAGCAGATTGCCACGCTGTG...GGAGGTGCTCATTGGCTCCTCACACATCCTCACCCCGACCCGCTTCCTGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR GCA 90 bp CCCCCGGGGTTGGTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGGCCTGTACATTGGCATaGTGGATCAGCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPGLVTVPPSCSRLRMRLACTLA*WISLAR
Trigger: CCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGC...CAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCACCAACCCCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR GCA 90 bp TGCCCTCGGTGGCCCTGGTCACCTCGTAGGCGGCCCTCATCTCTGACATGGCCAGCCTGTACATTGGCATaGTGGATCAGCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CPRWPWSPRRRPSSLTWPACTLA*WISLAR
Trigger: CCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGC...TGGCCATGTCAGAGATGAGGGCCGCCTACGAGGTGACCAGGGCCACCGAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR GCA 90 bp TCCAGGAAGCGGGTCGGGGTGAGGATGTGTGAGGAGCCAATGAGCACCTCCCACGATAGGTGGGCTCCATaGGTTCTCTCGGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SRKRVGVRMCEEPMSTSHDRWAP*VLSAPA
Trigger: GGCTGGAGCCGAGAGAACGCATGGAGCCCACCTATC...GTGGGAGGTGCTCATTGGCTCCTCACACATCCTCACCCCGACCCGCTTCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599400.1
CDS-3UTR CCA 90 bp CAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGTTGGCCAGGACGGCGTaGGCCAACTGGGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: QLLQVTDEAAVRLYIGMLLARTA*ANWAVS
Trigger: GGACACAGCCCAGTTGGCCCACGCCGTCCTGGCCAA...CAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp AGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGGGAGCGGGTTTTCTCTaGGCCCTCGCCCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: SCSRLRMRLLCACTLACWGAGFL*ALAQTG
Trigger: CCCAGTCTGGGCGAGGGCCCAGAGAAAACCCGCTCC...CCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp ATGGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTTGTGCGCCTGTACATTaGCATGCTGGATCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: MATPPMTYTMSRGPARASCAPVH*HAGSAW
Trigger: CCAAGCTGATCCAGCATGCCAATGTACAGGCGCACA...AGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp GCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCCAGTGACCGATGTGCGCCTGTACATTaGCATGCTGGATCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AGGPPGLLCQPCSCASDRCAPVH*HAGSAW
Trigger: CCAAGCTGATCCAGCATGCCAATGTACAGGCGCACA...TCGGTCACTGGCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp TCAGGGCAGGGCAATGTCCTCCAGCTTCTTGTCCAGTGCCTTCAGGTCATCCAGTCGGCTCCAGCCGGCTaGAGGTCCCCGAGCCCTACA +
Preference number: 4 (lower is better)
Translates to: SGQGNVLQLLVQCLQVIQSAPAG*RSPSPT
Trigger: TGTAGGGCTCGGGGACCTCCAGCCGGCTGGAGCCGA...CTGGATGACCTGAAGGCACTGGACAAGAAGCTGGAGGACATTGCCCTGCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599400.1
CDS-3UTR CCA 90 bp GTGAGGATGTGTGAGGAGCCAATGAGCACCTCCCACTTGCCCTCGGTGGCCCTGGAATCCCCAAGCCAATaGAGGAGGGTTCCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: VRMCEEPMSTSHLPSVALESPSQ*RRVPGS
Trigger: GGACCCGGGAACCCTCCTCCATTGGCTTGGGGATTC...CAGGGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACATCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR TCA 90 bp CGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCGTATGCGCATGCTTGGGTaGTCCATGATAAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: RGRIRRATGSCPAGPPRRMRMLG*SMISTF
Trigger: GAAGGTGCTTATCATGGATCACCCAAGCATGCGCAT...ACGCCGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp GGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGCTCAGCCAGGATATCTaGCATTTTGCAGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GAGSDTKGHRFLSSRSSTLSQDI*HFAAGR
Trigger: TCTTCCTGCTGCAAAATGTCAGATATCCTGGCTGAG...CGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp GGGGTTGGTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGTCTTTGATCAGGGCCTaGACCGACTTCTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GVGDSASQLLQVTDEAAVSLIRA*TDFSVG
Trigger: CCCCACGGAGAAGTCGGTTCAGGCCCTGATCAAAGA...CACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCACCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp CTCATCTCTGACATGGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCTCTTTGATCAGGGCCTaGACCGACTTCTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LISDMATPPMTYTMSRGPSLIRA*TDFSVG
Trigger: CCCCACGGAGAAGTCGGTTCAGGCCCTGATCAAAGA...GGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCATGTCAGAGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp GTGAGGATGTGTGAGGAGCCAATGAGCACCTCCCACTTGCCCTCGGTGGCCCTGTGTGTGAGGAGCCAATaGGCACCTCCCACTTGCCCT +
Preference number: 4 (lower is better)
Translates to: VRMCEEPMSTSHLPSVALCVRSQ*APPTCP
Trigger: AGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACA...CAGGGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACATCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR GCA 90 bp CTTGATGACCGGGGTCCAGCGGGACAGCTGATAGGTGGGCTCCATGCGTTCTCTGGACACGGGGTCAGCTaGCCGGTCCATTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: LDDRGPAGQLIGGLHAFSGHGVS*PVHYQQ
Trigger: CTGCTGATAATGGACCGGGCAGCTGACCCCGTGTCC...AGAGAACGCATGGAGCCCACCTATCAGCTGTCCCGCTGGACCCCGGTCATCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR GCA 90 bp TCCAGGAAGCGGGTCGGGGTGAGGATGTGTGAGGAGCCAATGAGCACCTCCCACTGGAACGTGAGCTCATaGAGTAGTGGGGACACGGGG +
Preference number: 4 (lower is better)
Translates to: SRKRVGVRMCEEPMSTSHWNVSS*SSGDTG
Trigger: CCCCGTGTCCCCACTACTGCATGAGCTCACGTTCCA...GTGGGAGGTGCTCATTGGCTCCTCACACATCCTCACCCCGACCCGCTTCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp CAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATCTTCTCCCCCTCTaGGTCGGAGCCCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: QLLQVTDEAAVRLYIGMLDLLPL*VGAHGQ
Trigger: CTGGCCATGGGCTCCGACGCAGAGGGGGAGAAGATC...CAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp CTCATCTCTGACATGGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCCGGATGAGGCTGCTGTaGGCCTGTACATTGGCATGC +
Preference number: 4 (lower is better)
Translates to: LISDMATPPMTYTMSRGPRMRLL*ACTLAC
Trigger: GCATGCCAATGTACAGGCGCACAGCAGCCTCATCCG...GGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCATGTCAGAGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR GCA 90 bp ATGGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTCAGCTTCTTGTCCAGTaGCTTCAGGTCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: MATPPMTYTMSRGPARASQLLVQ*LQVIQE
Trigger: TTCCTGGATGACCTGAAGGCACTGGACAAGAAGCTG...AGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp CCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCCAAGATGCGCATGCTTaGGTGATCCATGATAAGCAC +
Preference number: 4 (lower is better)
Translates to: PPMTYTMSRGPARASMPAQDAHA*VIHDKH
Trigger: GTGCTTATCATGGATCACCCAAGCATGCGCATCTTG...GGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp GGGGTGAGGATGTGTGAGGAGCCAATGAGCACCTCCCACTTGCCCTCGGTGGCCAAATGGCCTCCAGACTaGGAATGGGTTCCCGCCGTT +
Preference number: 4 (lower is better)
Translates to: GVRMCEEPMSTSHLPSVAKWPPD*EWVPAV
Trigger: AACGGCGGGAACCCATTCCCAGTCTGGAGGCCATTT...GGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACATCCTCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp GTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATCAGCTTGGCGGGTGGCGCACAGCGTaGCAATCTGCTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VTDEAAVRLYIGMLDQLGGWRTA*QSAGPA
Trigger: TGCTGGCCCAGCAGATTGCCACGCTGTGCGCCACCC...GCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CCA 90 bp TCAGGGCAGGGCAATGTCCTCCAGCTTCTTGTCCAGTGCCTTCAGGTCATCCAGCCTTGCGGTAGCGGATaGCCGGGTACTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SGQGNVLQLLVQCLQVIQPCGSG*PGTPAG
Trigger: CCCTGCAGGAGTACCCGGCCATCCGCTACCGCAAGG...CTGGATGACCTGAAGGCACTGGACAAGAAGCTGGAGGACATTGCCCTGCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CCA 90 bp TCAGGGCAGGGCAATGTCCTCCAGCTTCTTGTCCAGTGCCTTCAGGTCATCCAGCTGCGTCGGAGCCCATaGCCAGGTCCTGCTCCACAC +
Preference number: 4 (lower is better)
Translates to: SGQGNVLQLLVQCLQVIQLRRSP*PGPAPH
Trigger: GTGTGGAGCAGGACCTGGCCATGGGCTCCGACGCAG...CTGGATGACCTGAAGGCACTGGACAAGAAGCTGGAGGACATTGCCCTGCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp CCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGCATGCTGGATCAGCTTaGCCAGGTTCTCCTCACTCA +
Preference number: 4 (lower is better)
Translates to: PMTYTMSRGPARASMPALHAGSA*PGSPHS
Trigger: TGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATG...CAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp TCAGGGCAGGGCAATGTCCTCCAGCTTCTTGTCCAGTGCCTTCAGGTCATCCAGCCCACTTGCCCTCGGTaGCCCTGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: SGQGNVLQLLVQCLQVIQPTCPR*PWSPRR
Trigger: CCTACGAGGTGACCAGGGCCACCGAGGGCAAGTGGG...CTGGATGACCTGAAGGCACTGGACAAGAAGCTGGAGGACATTGCCCTGCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp AGGATGTGTGAGGAGCCAATGAGCACCTCCCACTTGCCCTCGGTGGCCCTGGTCCTGCGTCGGAGCCCATaGCCAGGTCCTTATTCAGCT +
Preference number: 4 (lower is better)
Translates to: RMCEEPMSTSHLPSVALVLRRSP*PGPYSA
Trigger: AGCTGAATAAGGACCTGGCCATGGGCTCCGACGCAG...GACCAGGGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597068.5
3UTR CAA 72 bp TCCAGCAGCACCGGAACGATCAGCTTCATGGAGTCCTaGATCTTCTCCCCCTCTGCGTCGGAGCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: SSSTGTISFMES*IFSPSASEPMA
Trigger: GGCCATGGGCTCCGACGCAGAGGGGGAGAAGATCAAGGACTCCATGAAGCTGATCGTTCCGGTGCTGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR TCA 90 bp GATGTAGAGCAGCAGGACCCGGATCTTGTCGTAGGCGGGCACCGCCGCGTCCAGATGCGCATGCTTGGGTaGTCCATGATAAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: DVEQQDPDLVVGGHRRVQMRMLG*SMISTF
Trigger: GAAGGTGCTTATCATGGATCACCCAAGCATGCGCAT...CTGGACGCGGCGGTGCCCGCCTACGACAAGATCCGGGTCCTGCTGCTCTACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR TCA 90 bp TCAGGGCAGGGCAATGTCCTCCAGCTTCTTGTCCAGTGCCTTCAGGTCATCCAGGGGCCGCTTTGTAGGTaGAAGTCGGGGTCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SGQGNVLQLLVQCLQVIQGPLCR*KSGSPG
Trigger: TCCAGGGGACCCCGACTTTCACCTACAAAGCGGCCC...CTGGATGACCTGAAGGCACTGGACAAGAAGCTGGAGGACATTGCCCTGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp TACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCGGGAGGAAGGCAAGGTaGATCTCCTTCAACGTCTTC +
Preference number: 4 (lower is better)
Translates to: YTMSRGPARASMPALFLCGRKAR*ISFNVF
Trigger: GAAGACGTTGAAGGAGATTCACCTTGCCTTCCTCCC...GCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp GTGAGGATGTGTGAGGAGCCAATGAGCACCTCCCACTTGCCCTCGGTGGCCCTGGCTTCATGGAGTCCTTaGTCTTCTCCCCCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: VRMCEEPMSTSHLPSVALASWSP*SSPPLR
Trigger: ACGCAGAGGGGGAGAAGATCAAGGACTCCATGAAGC...CAGGGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACATCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR TCA 90 bp GTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTTTGTTCTTGTGCCAGTaGCCGAAGCGGGCACTGACA +
Preference number: 4 (lower is better)
Translates to: VTVPPSCSRLRMRLLCACLFLCQ*PKRALT
Trigger: TGTCAGTGCCCGCTTCGGTCACTGGCACAAGAACAA...ACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp GGGGTTGGTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGTTGTTCTTGTGCCAGTaGCCGAAGCGGGCACTGACA +
Preference number: 4 (lower is better)
Translates to: GVGDSASQLLQVTDEAAVLFLCQ*PKRALT
Trigger: TGTCAGTGCCCGCTTCGGTCACTGGCACAAGAACAA...CACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCACCAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp CTTGATGACCGGGGTCCAGCGGGACAGCTGATAGGTGGGCTCCATGCGTTCTCTTGGAACGTGAGCTCATaGAGTAGTGGGGACACGGGG +
Preference number: 4 (lower is better)
Translates to: LDDRGPAGQLIGGLHAFSWNVSS*SSGDTG
Trigger: CCCCGTGTCCCCACTACTGCATGAGCTCACGTTCCA...AGAGAACGCATGGAGCCCACCTATCAGCTGTCCCGCTGGACCCCGGTCATCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR GCA 90 bp ACTTGCCCTCGGTGGCCCTGGTCACCTCGTAGGCGGCCCTCATCTCTGACATGGGACACATCTGCGATATaGATGTGGCGAAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: TCPRWPWSPRRRPSSLTWDTSAI*MWRSST
Trigger: GGTGGAGCTTCGCCACATGCATATCGCAGATGTGTC...CCATGTCAGAGATGAGGGCCGCCTACGAGGTGACCAGGGCCACCGAGGGCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp GGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATCTTCTTGGACACATCTaGGATATGCATGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GHTAHDIHDEPGARPGFYLLGHI*DMHVAK
Trigger: CTTCGCCACATGCATATCGCAGATGTGTCCAAGAAG...ATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp GACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTCCGTGGTCAGCCTCTTaGTCTCACAGAAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: DIHDEPGARPGFYASLVLPWSAS*SHRRSS
Trigger: TGAGGACCTTCTGTGAGAGCAAGAGGCTGACCACGG...AAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp TCAGGGCAGGGCAATGTCCTCCAGCTTCTTGTCCAGTGCCTTCAGGTCATCCAGGATCTTCTCCCCCTCTaGGTCGGAGCCCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: SGQGNVLQLLVQCLQVIQDLLPL*VGAHGQ
Trigger: CTGGCCATGGGCTCCGACGCAGAGGGGGAGAAGATC...CTGGATGACCTGAAGGCACTGGACAAGAAGCTGGAGGACATTGCCCTGCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp AGGATGTGTGAGGAGCCAATGAGCACCTCCCACTTGCCCTCGGTGGCCCTGGTCAAAGTCGGGGTCCCCTaGAAGTCTTTGATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RMCEEPMSTSHLPSVALVKVGVP*KSLIRA
Trigger: GGCCCTGATCAAAGACTTCCAGGGGACCCCGACTTT...GACCAGGGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp GCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCTCTGGGATAGGTCTTTaGTGTTCGCCTTGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: ASQLLQVTDEAAVRLYIGSGIGL*CSPCPW
Trigger: CCACGGACAAGGCGAACATCAAAGACCTATCCCAGA...GCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp CCCCCGGGGTTGGTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCAAGATGCGCATGCTTaGGTGATCCATGATAAGCAC +
Preference number: 4 (lower is better)
Translates to: PPGLVTVPPSCSRLRMRLQDAHA*VIHDKH
Trigger: GTGCTTATCATGGATCACCCAAGCATGCGCATCTTG...CAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCACCAACCCCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CCA 90 bp CTCATCTCTGACATGGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCTCTGCGATATGCATGTaGCGAAGCTCCACCCACAAG +
Preference number: 4 (lower is better)
Translates to: LISDMATPPMTYTMSRGPSAICM*RSSTHK
Trigger: CTTGTGGGTGGAGCTTCGCCACATGCATATCGCAGA...GGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCATGTCAGAGATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp GTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCTTATTCAGCTCCTTCTaGTACTGCGGCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VGAGSDTKGHRFLSSRSSLFSSF*YCGIFF
Trigger: GAAAAAGATGCCGCAGTACCAGAAGGAGCTGAATAA...GGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp AGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGGGGACAGCTGATAGGTaGGCTCCATGCGTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: SCSRLRMRLLCACTLACWGTADR*APCVLS
Trigger: CGAGAGAACGCATGGAGCCCACCTATCAGCTGTCCC...CCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR TCA 90 bp CTTGATGACCGGGGTCCAGCGGGACAGCTGATAGGTGGGCTCCATGCGTTCTCTGGGAGGAAGGCAAGGTaGATCTCCTTCAACGTCTTC +
Preference number: 4 (lower is better)
Translates to: LDDRGPAGQLIGGLHAFSGRKAR*ISFNVF
Trigger: GAAGACGTTGAAGGAGATTCACCTTGCCTTCCTCCC...AGAGAACGCATGGAGCCCACCTATCAGCTGTCCCGCTGGACCCCGGTCATCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR GCA 90 bp TCCAGGAAGCGGGTCGGGGTGAGGATGTGTGAGGAGCCAATGAGCACCTCCCACAGCAGGAAGACAAGATaGGCATGCTTGGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: SRKRVGVRMCEEPMSTSHSRKTR*ACLGDP
Trigger: TGGATCACCCAAGCATGCGCATCTTGTCTTCCTGCT...GTGGGAGGTGCTCATTGGCTCCTCACACATCCTCACCCCGACCCGCTTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp GTGTCCTGCTCTATGTCCAGCAGATCATACGCCATGGCCTGGAACGTGAGCTCAGGACACGGGGTCAGCTaGCCGGTCCATTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: VSCSMSSRSYAMAWNVSSGHGVS*PVHYQQ
Trigger: CTGCTGATAATGGACCGGGCAGCTGACCCCGTGTCC...TGAGCTCACGTTCCAGGCCATGGCGTATGATCTGCTGGACATAGAGCAGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR GCA 90 bp GACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTCAGCTTCTTGTCCAGTaGCTTCAGGTCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: DIHDEPGARPGFYASLVLQLLVQ*LQVIQE
Trigger: TTCCTGGATGACCTGAAGGCACTGGACAAGAAGCTG...AAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp CCCGAGCCCCCGGGGTTGGTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGTTATTCAGCTCCTTCTaGTACTGCGGCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PEPPGLVTVPPSCSRLRMLFSSF*YCGIFF
Trigger: GAAAAAGATGCCGCAGTACCAGAAGGAGCTGAATAA...CATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCACCAACCCCGGGGGCTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CCA 90 bp AGGATGTGTGAGGAGCCAATGAGCACCTCCCACTTGCCCTCGGTGGCCCTGGTCTGTACATTGGCATGCTaGATCAGCTTGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RMCEEPMSTSHLPSVALVCTLAC*ISLARF
Trigger: GAACCTGGCCAAGCTGATCCAGCATGCCAATGTACA...GACCAGGGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CCA 90 bp GTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTTGTACATTGGCATGCTaGATCAGCTTGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VTVPPSCSRLRMRLLCACCTLAC*ISLARF
Trigger: GAACCTGGCCAAGCTGATCCAGCATGCCAATGTACA...ACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp GTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATCAGCTTGGCTCCTCAGGAGCTCCGTaGCCTTCTTGGACACATCTG +
Preference number: 4 (lower is better)
Translates to: VTDEAAVRLYIGMLDQLGSSGAP*PSWTHL
Trigger: CAGATGTGTCCAAGAAGGTCACGGAGCTCCTGAGGA...GCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp GGGGTTGGTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCTTCTTGGACACATCTaGGATATGCATGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GVGDSASQLLQVTDEAAVLLGHI*DMHVAK
Trigger: CTTCGCCACATGCATATCGCAGATGTGTCCAAGAAG...CACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCACCAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp CTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATCAGAAATGGCCTCCAGACTaGGAATGGGTTCCCGCCGTT +
Preference number: 4 (lower is better)
Translates to: LQVTDEAAVRLYIGMLDQKWPPD*EWVPAV
Trigger: AACGGCGGGAACCCATTCCCAGTCTGGAGGCCATTT...CTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp CTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATCCTCGCTCAGCCCGGTaGTCTCATACCTGTATGTGT +
Preference number: 4 (lower is better)
Translates to: LLQVTDEAAVRLYIGMLDPRSAR*SHTCMC
Trigger: ACACATACAGGTATGAGACCACCGGGCTGAGCGAGG...ATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
3UTR CAA 72 bp AGGTCTTTGATGTTCGCCTTGTCCGTGGTCAGCCTCTaGCTCTCACAGAAGGTCCTCAGGAGCTCCGTGACC +
Preference number: 4 (lower is better)
Translates to: RSLMFALSVVSL*LSQKVLRSSVT
Trigger: GGTCACGGAGCTCCTGAGGACCTTCTGTGAGAGCAAGAGGCTGACCACGGACAAGGCGAACATCAAAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
3UTR CAA 72 bp CTGCTGTGCGCCTGTACATTGGCATGCTGGATCAGCTaGGCCAGGTTCTCCTCACTCACACCATTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LLCACTLACWIS*ARFSSLTPFRR
Trigger: CCTTCGGAATGGTGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR TCA 90 bp TCATCCAGGAAGCGGGTCGGGGTGAGGATGTGTGAGGAGCCAATGAGCACCTCCTGTCTTCAACAATGGTaGTGCCCTCAGCCAGGATAT +
Preference number: 4 (lower is better)
Translates to: SSRKRVGVRMCEEPMSTSCLQQW*CPQPGY
Trigger: ATATCCTGGCTGAGGGCATCACCATTGTTGAAGACA...GGAGGTGCTCATTGGCTCCTCACACATCCTCACCCCGACCCGCTTCCTGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR TCA 90 bp CTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATTCTGGGATAGGTCTTTaGTGTTCGCCTTGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: LLQVTDEAAVRLYIGMLDSGIGL*CSPCPW
Trigger: CCACGGACAAGGCGAACATCAAAGACCTATCCCAGA...ATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp GTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTTACCTGTATGTGTCCTaGTCTATGTCCAGCAGATCA +
Preference number: 4 (lower is better)
Translates to: VTVPPSCSRLRMRLLCACYLYVS*SMSSRS
Trigger: TGATCTGCTGGACATAGAGCAGGACACATACAGGTA...ACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp GTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGAGCTCCTTCTGGTACTaGGGCATCTTTTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: VPPSCSRLRMRLLCACTLSSFWY*GIFFRI
Trigger: GATCCTGAAAAAGATGCCGCAGTACCAGAAGGAGCT...CAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp ACTTGCCCTCGGTGGCCCTGGTCACCTCGTAGGCGGCCCTCATCTCTGACATGGTCTGCTAGATGCAGGTaGGTAGAATACTTATTCAGC +
Preference number: 4 (lower is better)
Translates to: TCPRWPWSPRRRPSSLTWSARCR*VEYLFS
Trigger: GCTGAATAAGTATTCTACGCACCTGCATCTAGCAGA...CCATGTCAGAGATGAGGGCCGCCTACGAGGTGACCAGGGCCACCGAGGGCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR CCA 90 bp TGGTACTGCGGCATCTTTTTCAGGATCTGGGATAGGTCTTTGATGTTCGCCTTGGGAGCGGGTTTTCTCTaGGCCCTCGCCCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: WYCGIFFRIWDRSLMFALGAGFL*ALAQTG
Trigger: CCCAGTCTGGGCGAGGGCCCAGAGAAAACCCGCTCC...CAAGGCGAACATCAAAGACCTATCCCAGATCCTGAAAAAGATGCCGCAGTACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR CCA 90 bp TGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATCTCCATTATCAGCAGCTaGGAGCGGGTTTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSRLRMRLLCACTLACWISIISS*ERVFSG
Trigger: CCCAGAGAAAACCCGCTCCCAGCTGCTGATAATGGA...GATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp TCAGGGCAGGGCAATGTCCTCCAGCTTCTTGTCCAGTGCCTTCAGGTCATCCAGTCATACGCCATGGCCTaGAACGTGAGCTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: SGQGNVLQLLVQCLQVIQSYAMA*NVSSCS
Trigger: ACTGCATGAGCTCACGTTCCAGGCCATGGCGTATGA...CTGGATGACCTGAAGGCACTGGACAAGAAGCTGGAGGACATTGCCCTGCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp CTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATTCATACGCCATGGCCTaGAACGTGAGCTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: LLQVTDEAAVRLYIGMLDSYAMA*NVSSCS
Trigger: ACTGCATGAGCTCACGTTCCAGGCCATGGCGTATGA...ATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp TTCAGGTCATCCAGGAAGCGGGTCGGGGTGAGGATGTGTGAGGAGCCAATGAGCAGCTCCTTCTGGTACTaGGGCATCTTTTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: FRSSRKRVGVRMCEEPMSSSFWY*GIFFRI
Trigger: GATCCTGAAAAAGATGCCGCAGTACCAGAAGGAGCT...GCTCATTGGCTCCTCACACATCCTCACCCCGACCCGCTTCCTGGATGACCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CCA 90 bp TGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATCTGTACATTGGCATGCTaGATCAGCTTGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: CSRLRMRLLCACTLACWICTLAC*ISLARF
Trigger: GAACCTGGCCAAGCTGATCCAGCATGCCAATGTACA...GATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp CAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGACCGAGCCCTTGAAGTaGTTCATACAATCATCTGCT +
Preference number: 4 (lower is better)
Translates to: QLLQVTDEAAVRLYIGMLTEPLK*FIQSSA
Trigger: AGCAGATGATTGTATGAAGCACTTCAAGGGCTCGGT...CAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR CCA 90 bp ACAGAAGGTCCTCAGGAGCTCCGTGACCTTCTTGGACACATCTGCGATATGCATTGTTCGCCTTGTCCGTaGTCAGCCTCTTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: TEGPQELRDLLGHICDMHCSPCP*SASCSH
Trigger: GTGAGAGCAAGAGGCTGACCACGGACAAGGCGAACA...ATGCATATCGCAGATGTGTCCAAGAAGGTCACGGAGCTCCTGAGGACCTTCTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR GCA 90 bp TCAGGGCAGGGCAATGTCCTCCAGCTTCTTGTCCAGTGCCTTCAGGTCATCCAGTACCTGTATGTGTCCTaGTCTATGTCCAGCAGATCA +
Preference number: 4 (lower is better)
Translates to: SGQGNVLQLLVQCLQVIQYLYVS*SMSSRS
Trigger: TGATCTGCTGGACATAGAGCAGGACACATACAGGTA...CTGGATGACCTGAAGGCACTGGACAAGAAGCTGGAGGACATTGCCCTGCCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR GCA 90 bp TGGTACTGCGGCATCTTTTTCAGGATCTGGGATAGGTCTTTGATGTTCGCCTTGCAATCATCTGCTAGATaGAGGTGCGTAGAATACTTA +
Preference number: 4 (lower is better)
Translates to: WYCGIFFRIWDRSLMFALQSSAR*RCVEYL
Trigger: TAAGTATTCTACGCACCTGCATCTAGCAGATGATTG...CAAGGCGAACATCAAAGACCTATCCCAGATCCTGAAAAAGATGCCGCAGTACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS CCA 90 bp CCTCCCCGCCGTCGGTTCTCGCCCAGGCCCAGGAAGTTGAGTCCCTaGCGGGGAGGACGGGCAGGTGCGTCCGCGCTGCCGAGCACGAAG +
Preference number: 5 (lower is better)
Translates to: PPRRRFSPRPRKLSP*RGGRAGASALPSTK
Trigger: CTTCGTGCTCGGCAGCGCGGACGCACCTGCCCGTCCTCCCCGCCAGGGACTCAACTTCCTGGGCCTGGGCGAGAACCGACGGCGGGGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593535.5
CDS-3UTR CAA 90 bp GTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCCCCGAGCCCCCGGGGTaGGTGACAGTGCCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: VGAGSDTKGHRFLSSRSSPEPPG*VTVPPS
Trigger: GCTGGGAGGCACTGTCACCAACCCCGGGGGCTCGGG...GGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CAA 90 bp AGCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCACGGCGTCCCCGGGGTaGGTGACAGTGCCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: SWPWGRGRIRRATGSCPATASPG*VTVPPS
Trigger: GCTGGGAGGCACTGTCACCAACCCCGGGGACGCCGT...GGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS TCA 90 bp CGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCCAGTaGCCGAAGCGGGCACTGTGCAGGGCAGGGGCAGAAAGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: RGPARASMPALFLCQ*PKRALCRAGAESPG
Trigger: GCCTGGACTTTCTGCCCCTGCCCTGCACAGTGCCCGCTTCGGTCACTGGCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595800.1
ENST00000601061.1
CDS CCA 90 bp CTGGGAGTGTCTGCCTTGAAGGCGTTCAGCTTGGCCAGGACGGCGTaGGCCAACTGGGCTGTGTCCTCTGGGCCCCTGGGCCTCGTAGGG +
Preference number: 5 (lower is better)
Translates to: LGVSALKAFSLARTA*ANWAVSSGPLGLVG
Trigger: CCCTACGAGGCCCAGGGGCCCAGAGGACACAGCCCAGTTGGCCCACGCCGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR CAA 90 bp GGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCGTCTTGAAGGCGTTCAGCTaGGCCAGGACGGCGTGGGCC +
Preference number: 5 (lower is better)
Translates to: GVGYEGPQVPVQPVLHGVLKAFS*ARTAWA
Trigger: GGCCCACGCCGTCCTGGCCAAGCTGAACGCCTTCAA...GACGCCGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS GCA 90 bp GGCAATCTGCTGGGCCAGCACCTCGAGCTGCCGCGTGCGCTCCTCTaGCCGGAAGGGGCAGTAGAGGTTGTAGGTGCTGTGGGGAGCATC +
Preference number: 5 (lower is better)
Translates to: GNLLGQHLELPRALL*PEGAVEVVGAVGSI
Trigger: GATGCTCCCCACAGCACCTACAACCTCTACTGCCCCTTCCGGGCAGAGGAGCGCACGCGGCAGCTCGAGGTGCTGGCCCAGCAGATTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000595950.5
ENST00000597068.5
ENST00000599648.1
CDS GCA 90 bp CGCACAGCGTGGCAATCTGCTGGGCCAGCACCTCGAGCTGCCGCGTaGGCTCCTCTGCCCGGAAGGGGCAGTAGAGGTTGTAGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: RTAWQSAGPAPRAAA*APLPGRGSRGCRCC
Trigger: ACAGCACCTACAACCTCTACTGCCCCTTCCGGGCAGAGGAGCGCACGCGGCAGCTCGAGGTGCTGGCCCAGCAGATTGCCACGCTGTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000595950.5
ENST00000597068.5
ENST00000599648.1
CDS CCA 90 bp GGGGAGGACGGGCAGGTGCGTCCGCGCTGCCGAGCACGAAGTCGCTaGAGGTGCACACCTCGACGACACGCTCACAGATGGGAGTTCAGA +
Preference number: 5 (lower is better)
Translates to: GEDGQVRPRCRARSR*RCTPRRHAHRWEFR
Trigger: TCTGAACTCCCATCTGTGAGCGTGTCGTCGAGGTGTGCACCTCCAGCGACTTCGTGCTCGGCAGCGCGGACGCACCTGCCCGTCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593535.5
CDS-3UTR CAA 90 bp TGCCCTCGGTGGCCCTGGTCACCTCGTAGGCGGCCCTCATCTCTGACATGGCCATTGAAGGCGTTCAGCTaGGCCAGGACGGCGTGGGCC +
Preference number: 5 (lower is better)
Translates to: CPRWPWSPRRRPSSLTWPLKAFS*ARTAWA
Trigger: GGCCCACGCCGTCCTGGCCAAGCTGAACGCCTTCAA...TGGCCATGTCAGAGATGAGGGCCGCCTACGAGGTGACCAGGGCCACCGAGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp CGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCTGGGAGTGTCTGCCTaGAAGGCGTTCAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: RGGGVGYEGPQVPVQPVLLGVSA*KAFSLA
Trigger: GGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAG...GAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp ACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCCAGATGAGCACCTCCCACTaGCCCTCGGTGGCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: TMSRGPARASMPALFLCQMSTSH*PSVALV
Trigger: GACCAGGGCCACCGAGGGCAAGTGGGAGGTGCTCAT...CTGGCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS TCA 90 bp AGCGGGTTTTCTCTGGGCCCTCGCCCAGACTGGGAGTGTCTGCCTTaGAGGCGTTCAGCTTGGCCAGGACGGCGTGGGCCAACTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SGFSLGPRPDWECLP*RRSAWPGRRGPTGL
Trigger: CAGCCCAGTTGGCCCACGCCGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGGCGAGGGCCCAGAGAAAACCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000594221.5
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp TGGGAGCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCGCATGCTGGATCAGCTaGGCCAGGTTCTCCTCACTC +
Preference number: 5 (lower is better)
Translates to: WELAVGAGSDTKGHRFLSACWIS*ARFSSL
Trigger: GAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGC...GGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS GCA 90 bp GACGGGCAGGTGCGTCCGCGCTGCCGAGCACGAAGTCGCTGGAGGTaGACACCTCGACGACACGCTCACAGATGGGAGTTCAGACACACA +
Preference number: 5 (lower is better)
Translates to: DGQVRPRCRARSRWR*TPRRHAHRWEFRHT
Trigger: TGTGTGTCTGAACTCCCATCTGTGAGCGTGTCGTCGAGGTGTGCACCTCCAGCGACTTCGTGCTCGGCAGCGCGGACGCACCTGCCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593535.5
CDS-3UTR CAA 90 bp ATGGCCACACCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTACGTCTTCACCACCTTaGCCAGACGAGAGCGGCCTA +
Preference number: 5 (lower is better)
Translates to: MATPPMTYTMSRGPARASTSSPP*PDESGL
Trigger: TAGGCCGCTCTCGTCTGGCAAAGGTGGTGAAGACGT...AGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp GGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCGTCACGTCTTCACCACCTTaGCCAGACGAGAGCGGCCTA +
Preference number: 5 (lower is better)
Translates to: GVGYEGPQVPVQPVLHGVTSSPP*PDESGL
Trigger: TAGGCCGCTCTCGTCTGGCAAAGGTGGTGAAGACGT...GACGCCGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp CCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGCTGGGAGTGTCTGCCTaGAAGGCGTTCAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PMTYTMSRGPARASMPALLGVSA*KAFSLA
Trigger: GGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAG...CAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp GCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGAGCTCCGTGACCTTCTaGGACACATCTGCGATATGC +
Preference number: 5 (lower is better)
Translates to: AGRGGGVGYEGPQVPVQPSSVTF*DTSAIC
Trigger: GCATATCGCAGATGTGTCCAAGAAGGTCACGGAGCT...CGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp GCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCCAGTGACCGATCCGTGGTCAGCCTCTaGCTCTCACAGAAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: AGGPPGLLCQPCSCASDRSVVSL*LSQKVL
Trigger: GAGGACCTTCTGTGAGAGCAAGAGGCTGACCACGGA...TCGGTCACTGGCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp GGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCAGCTTCATGGAGTCCTaGATCTTCTCCCCCTCTGCG +
Preference number: 5 (lower is better)
Translates to: GGVGYEGPQVPVQPVLHGSFMES*IFSPSA
Trigger: CGCAGAGGGGGAGAAGATCAAGGACTCCATGAAGCT...GCCGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CAA 90 bp CGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCAGCTTCATGGAGTCCTaGATCTTCTCCCCCTCTGCG +
Preference number: 5 (lower is better)
Translates to: RGGGVGYEGPQVPVQPVLSFMES*IFSPSA
Trigger: CGCAGAGGGGGAGAAGATCAAGGACTCCATGAAGCT...GAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CAA 90 bp GGGGTTGGTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGATGAGCACCTCCCACTaGCCCTCGGTGGCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: GVGDSASQLLQVTDEAAVMSTSH*PSVALV
Trigger: GACCAGGGCCACCGAGGGCAAGTGGGAGGTGCTCAT...CACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCACCAACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp GCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCCAGTGACCGAAGCTTCATGGAGTCCTaGATCTTCTCCCCCTCTGCG +
Preference number: 5 (lower is better)
Translates to: AGGPPGLLCQPCSCASDRSFMES*IFSPSA
Trigger: CGCAGAGGGGGAGAAGATCAAGGACTCCATGAAGCT...TCGGTCACTGGCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CAA 90 bp GATGTAGAGCAGCAGGACCCGGATCTTGTCGTAGGCGGGCACCGCCGCGTCCAGGCATGCTGGATCAGCTaGGCCAGGTTCTCCTCACTC +
Preference number: 5 (lower is better)
Translates to: DVEQQDPDLVVGGHRRVQACWIS*ARFSSL
Trigger: GAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGC...CTGGACGCGGCGGTGCCCGCCTACGACAAGATCCGGGTCCTGCTGCTCTACATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR CAA 90 bp CGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGCCGGTCCTCCACGGCGTCTGTGCGCCTGTACATaGGCATGCTGGATCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RGRIRRATGSCPAGPPRRLCACT*ACWISL
Trigger: CAAGCTGATCCAGCATGCCAATGTACAGGCGCACAG...ACGCCGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CAA 90 bp TCATCCAGGAAGCGGGTCGGGGTGAGGATGTGTGAGGAGCCAATGAGCACCTCCATGAGCACCTCCCACTaGCCCTCGGTGGCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: SSRKRVGVRMCEEPMSTSMSTSH*PSVALV
Trigger: GACCAGGGCCACCGAGGGCAAGTGGGAGGTGCTCAT...GGAGGTGCTCATTGGCTCCTCACACATCCTCACCCCGACCCGCTTCCTGGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CAA 90 bp GGAGCTGGCCGTGGGGGCGGGGTCGGATACGAAGGGCCACAGGTTCCTGTCCAGATGTCCTCCAGCTTCTaGTCCAGTGCCTTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: GAGRGGGVGYEGPQVPVQMSSSF*SSAFRS
Trigger: TGACCTGAAGGCACTGGACAAGAAGCTGGAGGACAT...CTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCGCCCCCACGGCCAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CAA 90 bp ACTTGCCCTCGGTGGCCCTGGTCACCTCGTAGGCGGCCCTCATCTCTGACATGGGCATGCTGGATCAGCTaGGCCAGGTTCTCCTCACTC +
Preference number: 5 (lower is better)
Translates to: TCPRWPWSPRRRPSSLTWACWIS*ARFSSL
Trigger: GAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGC...CCATGTCAGAGATGAGGGCCGCCTACGAGGTGACCAGGGCCACCGAGGGCAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CAA 90 bp ACTTGCCCTCGGTGGCCCTGGTCACCTCGTAGGCGGCCCTCATCTCTGACATGGTCCTCCATTACATCCTaGATGACCGGGGTCCAGCGG +
Preference number: 5 (lower is better)
Translates to: TCPRWPWSPRRRPSSLTWSSITS*MTGVQR
Trigger: CCGCTGGACCCCGGTCATCAAGGATGTAATGGAGGA...CCATGTCAGAGATGAGGGCCGCCTACGAGGTGACCAGGGCCACCGAGGGCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599400.1
CDS CCA 90 bp GAGGCGGGCCAAGGACATCCCCAGGATCCTCGGCAAGAGGACATTTaGGTCCTACCTCATCTCAGCACCAGGTCTCTCAAGGTCCCACCC +
Preference number: 5 (lower is better)
Translates to: EAGQGHPQDPRQEDI*VLPHLSTRSLKVPP
Trigger: GGGTGGGACCTTGAGAGACCTGGTGCTGAGATGAGGTAGGACCCAAATGTCCTCTTGCCGAGGATCCTGGGGATGTCCTTGGCCCGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593854.5
CDS CCA 90 bp GAGAGGGGCACAGTCAGGGGTTCCCACGCTCAGGTCCCATCTCACTaGGGACGCGTTCACTCACTGGTGATGCCCTCAGCCAGGATATCT +
Preference number: 5 (lower is better)
Translates to: ERGTVRGSHAQVPSH*GRVHSLVMPSARIS
Trigger: AGATATCCTGGCTGAGGGCATCACCAGTGAGTGAACGCGTCCCCAGTGAGATGGGACCTGAGCGTGGGAACCCCTGACTGTGCCCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597467.1
ENST00000599905.1
CDS CCA 90 bp ATAGAAGGCTCTGCATTCTTGGGACCCCACATCCAGAGTCCACCCTaGGAGTCCCACACAGGGCTCCACGAGGGAGCTGCACGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: IEGSAFLGPHIQSPP*ESHTGLHEGAARSG
Trigger: TCCTGACCGTGCAGCTCCCTCGTGGAGCCCTGTGTGGGACTCCCAGGGTGGACTCTGGATGTGGGGTCCCAAGAATGCAGAGCCTTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597467.1
ENST00000599905.1
CDS-3UTR CAA 90 bp CCGCCCATGACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCATGGGTTCCCGCCGTTaGTTGATGTCTTCAACAATG +
Preference number: 5 (lower is better)
Translates to: PPMTYTMSRGPARASMPAMGSRR*LMSSTM
Trigger: CATTGTTGAAGACATCAACAAACGGCGGGAACCCAT...GGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp GACATACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTTCCTCCATTACATCCTaGATGACCGGGGTCCAGCGG +
Preference number: 5 (lower is better)
Translates to: DIHDEPGARPGFYASLVLSSITS*MTGVQR
Trigger: CCGCTGGACCCCGGTCATCAAGGATGTAATGGAGGA...AAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599400.1
CDS TCA 90 bp TGTCCTGCTCTATGTCCAGCAGATCATACGCCATGGCCTGGAACGTaGGCTCATGCAGTAGTGGGGACACGGGGTCAGCTGCCCGGTCCA +
Preference number: 5 (lower is better)
Translates to: CPALCPADHTPWPGT*AHAVVGTRGQLPGP
Trigger: TGGACCGGGCAGCTGACCCCGTGTCCCCACTACTGCATGAGCTCACGTTCCAGGCCATGGCGTATGATCTGCTGGACATAGAGCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000594221.5
ENST00000597068.5
ENST00000599737.5
CDS GCA 90 bp GGCAAAGTGACTGGGACACCACCTGGGGTCACCCATAGAAGGCTCTaGATTCTTGGGACCCCACATCCAGAGTCCACCCTGGGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: GKVTGTPPGVTHRRL*ILGTPHPESTLGVP
Trigger: TGGGACTCCCAGGGTGGACTCTGGATGTGGGGTCCCAAGAATGCAGAGCCTTCTATGGGTGACCCCAGGTGGTGTCCCAGTCACTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599905.1
CDS-3UTR CAA 90 bp CCCCCGGGGTTGGTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGGGTTCCCGCCGTTTGTaGATGTCTTCAACAATGGTG +
Preference number: 5 (lower is better)
Translates to: PPGLVTVPPSCSRLRMRLGSRRL*MSSTMV
Trigger: CACCATTGTTGAAGACATCAACAAACGGCGGGAACC...CAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCACCAACCCCGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CAA 90 bp GGGGTTGGTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCTGTGCGCCTGTACATaGGCATGCTGGATCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GVGDSASQLLQVTDEAAVLCACT*ACWISL
Trigger: CAAGCTGATCCAGCATGCCAATGTACAGGCGCACAG...CACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCACCAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp ACTTGCCCTCGGTGGCCCTGGTCACCTCGTAGGCGGCCCTCATCTCTGACATGGATGTCCTCCAGCTTCTaGTCCAGTGCCTTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: TCPRWPWSPRRRPSSLTWMSSSF*SSAFRS
Trigger: TGACCTGAAGGCACTGGACAAGAAGCTGGAGGACAT...CCATGTCAGAGATGAGGGCCGCCTACGAGGTGACCAGGGCCACCGAGGGCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000597068.5
ENST00000599400.1
ENST00000599737.5
CDS-3UTR CAA 90 bp CACCGCCGCGTCCAGCAGCACCGGAACGATCAGCTTCATGGAGTCCTTGATCTTTCCGTGGTCAGCCTCTaGCTCTCACAGAAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: HRRVQQHRNDQLHGVLDLSVVSL*LSQKVL
Trigger: GAGGACCTTCTGTGAGAGCAAGAGGCTGACCACGGA...AAGATCAAGGACTCCATGAAGCTGATCGTTCCGGTGCTGCTGGACGCGGCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS-3UTR CAA 90 bp CTTGATGACCGGGGTCCAGCGGGACAGCTGATAGGTGGGCTCCATGCGTTCTCTCTGTGCGCCTGTACATaGGCATGCTGGATCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LDDRGPAGQLIGGLHAFSLCACT*ACWISL
Trigger: CAAGCTGATCCAGCATGCCAATGTACAGGCGCACAG...AGAGAACGCATGGAGCCCACCTATCAGCTGTCCCGCTGGACCCCGGTCATCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CAA 90 bp GTGACAGTGCCTCCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTATGTCCTCCAGCTTCTaGTCCAGTGCCTTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: VTVPPSCSRLRMRLLCACMSSSF*SSAFRS
Trigger: TGACCTGAAGGCACTGGACAAGAAGCTGGAGGACAT...ACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS GCA 90 bp TGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATaGTGGATCAGCTTGGCCAGGTTCTCCTCACTCACACCTCAGTGG +
Preference number: 5 (lower is better)
Translates to: CSRLRMRLLCACTLA*WISLARFSSLTPQW
Trigger: CCACTGAGGTGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS CCA 90 bp CTGTATGTGTCCTGCTCTATGTCCAGCAGATCATACGCCATGGCCTaGAACGTGAGCTCATGCAGTAGTGGGGACACGGGGTCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LYVSCSMSSRSYAMA*NVSSCSSGDTGSAA
Trigger: GGCAGCTGACCCCGTGTCCCCACTACTGCATGAGCTCACGTTCCAGGCCATGGCGTATGATCTGCTGGACATAGAGCAGGACACATACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000594221.5
ENST00000597068.5
ENST00000599737.5
CDS CCA 90 bp TCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTaGATCAGCTTGGCCAGGTTCTCCTCACTCACACCTCAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: SRLRMRLLCACTLAC*ISLARFSSLTPQWR
Trigger: CCTCCACTGAGGTGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CAA 90 bp TACACGATGAGCCGGGGGCCCGCCCGGGCTTCTATGCCAGCCTTGTTCTTGTGCTTCTCCACCGAGCCCTaGAAGTGCTTCATACAATCA +
Preference number: 5 (lower is better)
Translates to: YTMSRGPARASMPALFLCFSTEP*KCFIQS
Trigger: TGATTGTATGAAGCACTTCAAGGGCTCGGTGGAGAA...GCACAAGAACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS CCA 90 bp CCAGAACCCATTCACCCAACTCCACCCATGTGGACAGGCAGTTCTTaGGGGTCCCACATTCAGGGTCTTCCCCATAGGCCTGATGATGAG +
Preference number: 5 (lower is better)
Translates to: PEPIHPTPPMWTGSS*GSHIQGLPHRPDDE
Trigger: CTCATCATCAGGCCTATGGGGAAGACCCTGAATGTGGGACCCCCAAGAACTGCCTGTCCACATGGGTGGAGTTGGGTGAATGGGTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597467.1
CDS-3UTR CAA 90 bp CAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGTCTTTGATGTTCGCCTaGTCCGTGGTCAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: QLLQVTDEAAVRLYIGMLSLMFA*SVVSLL
Trigger: CAAGAGGCTGACCACGGACAAGGCGAACATCAAAGA...CAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp AGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGTCTTTGATGTTCGCCTaGTCCGTGGTCAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SCSRLRMRLLCACTLACWSLMFA*SVVSLL
Trigger: CAAGAGGCTGACCACGGACAAGGCGAACATCAAAGA...CCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp TCATCCAGGAAGCGGGTCGGGGTGAGGATGTGTGAGGAGCCAATGAGCACCTCCATCTGGGATAGGTCTTaGATGTTCGCCTTGTCCGTG +
Preference number: 5 (lower is better)
Translates to: SSRKRVGVRMCEEPMSTSIWDRS*MFALSV
Trigger: CACGGACAAGGCGAACATCAAAGACCTATCCCAGAT...GGAGGTGCTCATTGGCTCCTCACACATCCTCACCCCGACCCGCTTCCTGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp GTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATCAGCTTGGCCACTCCCCATCCTTCTaGACACTCCGAATAACTCCG +
Preference number: 5 (lower is better)
Translates to: VTDEAAVRLYIGMLDQLGHSPSF*TLRITP
Trigger: CGGAGTTATTCGGAGTGTCAAGAAGGATGGGGAGTG...GCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS-3UTR CAA 90 bp CTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATAGCTCCGTGACCTTCTaGGACACATCTGCGATATGC +
Preference number: 5 (lower is better)
Translates to: LLQVTDEAAVRLYIGMLDSSVTF*DTSAIC
Trigger: GCATATCGCAGATGTGTCCAAGAAGGTCACGGAGCT...ATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp CTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATGGTTCCCGCCGTTTGTaGATGTCTTCAACAATGGTG +
Preference number: 5 (lower is better)
Translates to: LLQVTDEAAVRLYIGMLDGSRRL*MSSTMV
Trigger: CACCATTGTTGAAGACATCAACAAACGGCGGGAACC...ATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp TTCAGGTCATCCAGGAAGCGGGTCGGGGTGAGGATGTGTGAGGAGCCAATGAGCATGGGTTCCCGCCGTTaGTTGATGTCTTCAACAATG +
Preference number: 5 (lower is better)
Translates to: FRSSRKRVGVRMCEEPMSMGSRR*LMSSTM
Trigger: CATTGTTGAAGACATCAACAAACGGCGGGAACCCAT...GCTCATTGGCTCCTCACACATCCTCACCCCGACCCGCTTCCTGGATGACCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS-3UTR CAA 90 bp CTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATCAGATCTGGGATAGGTCTTaGATGTTCGCCTTGTCCGTG +
Preference number: 5 (lower is better)
Translates to: LQVTDEAAVRLYIGMLDQIWDRS*MFALSV
Trigger: CACGGACAAGGCGAACATCAAAGACCTATCCCAGAT...CTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597068.5
ENST00000599737.5
CDS GCA 90 bp AAGAATGGATTTGGTCACATGATCCGGGCTGTCCGTGCAGGGAGCTaGGTACTTGGGAGTTCTGGACGATTTGAGGGGATCCTACACTCA +
Preference number: 5 (lower is better)
Translates to: KNGFGHMIRAVRAGS*VLGSSGRFEGILHS
Trigger: TGAGTGTAGGATCCCCTCAAATCGTCCAGAACTCCCAAGTACGCAGCTCCCTGCACGGACAGCCCGGATCATGTGACCAAATCCATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597467.1
ENST00000599905.1
CDS GCA 90 bp ACACACACAGATGCACACACACATACACACATGCACACACAGAGATaGACACACATACATACACACATGCACACACACAGATGCGCGCGC +
Preference number: 5 (lower is better)
Translates to: THTDAHTHTHMHTQR*THIHTHMHTHRCAR
Trigger: GCGCGCGCATCTGTGTGTGTGCATGTGTGTATGTATGTGTGTGCATCTCTGTGTGTGCATGTGTGTATGTGTGTGTGCATCTGTGTGTGT
50% GC, longest homopolymer 1 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612033.1
CDS CCA 90 bp ATCCATAACTCACTGGGGACCCACGAATCTAATTCCATAACTCCTTaGGTACCCAGAAGTCTAAACCCACAGTTCCTCGGCAACCCAGTA +
Preference number: 5 (lower is better)
Translates to: IHNSLGTHESNSITP*VPRSLNPQFLGNPV
Trigger: TACTGGGTTGCCGAGGAACTGTGGGTTTAGACTTCTGGGTACCCAAGGAGTTATGGAATTAGATTCGTGGGTCCCCAGTGAGTTATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595800.1
CDS CCA 72 bp CGTCGGTTCTCGCCCAGGCCCAGGAAGTTGAGTCCCTaGCGGGGAGGACGGGCAGGTGCGTCCGCGCTGCCG +
Preference number: 6 (lower is better)
Translates to: RRFSPRPRKLSP*RGGRAGASALP
Trigger: CGGCAGCGCGGACGCACCTGCCCGTCCTCCCCGCCAGGGACTCAACTTCCTGGGCCTGGGCGAGAACCGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593535.5
CDS GCA 72 bp GTCCCTGGCGGGGAGGACGGGCAGGTGCGTCCGCGCTaGCGAGCACGAAGTCGCTGGAGGTGCACACCTCGA +
Preference number: 6 (lower is better)
Translates to: VPGGEDGQVRPR*RARSRWRCTPR
Trigger: TCGAGGTGTGCACCTCCAGCGACTTCGTGCTCGGCAGCGCGGACGCACCTGCCCGTCCTCCCCGCCAGGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593535.5
CDS GCA 72 bp GGGTACTCCTGCAGGGTGGCGCACAGCGTGGCAATCTaGTGGGCCAGCACCTCGAGCTGCCGCGTGCGCTCC +
Preference number: 6 (lower is better)
Translates to: GYSCRVAHSVAI*WASTSSCRVRS
Trigger: GGAGCGCACGCGGCAGCTCGAGGTGCTGGCCCAGCAGATTGCCACGCTGTGCGCCACCCTGCAGGAGTACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000595950.5
ENST00000597068.5
ENST00000599648.1
CDS CCA 72 bp CTCTGCGTCGGAGCCCATGGCCAGGTCCTGCGGGCATaGGGTCAGCCGTCCACCGGCCGCTATGTGTCAGGG +
Preference number: 6 (lower is better)
Translates to: LCVGAHGQVLRA*GQPSTGRYVSG
Trigger: CCCTGACACATAGCGGCCGGTGGACGGCTGACCCCATGCCCGCAGGACCTGGCCATGGGCTCCGACGCAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593854.5
ENST00000595800.1
ENST00000599558.1
CDS CAA 90 bp GGGCCCTCGCCCAGACTGGGAGTGTCTGCCTTGAAGGCGTTCAGCTaGGCCAGGACGGCGTGGGCCAACTGGGCTGTGTCCTCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: GPSPRLGVSALKAFS*ARTAWANWAVSSGP
Trigger: GGGCCCAGAGGACACAGCCCAGTTGGCCCACGCCGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGGCGAGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000594221.5
ENST00000597068.5
ENST00000599737.5
CDS CCA 72 bp AAGGCGTTCAGCTTGGCCAGGACGGCGTGGGCCAACTaGGCTGTGTCCTCTGGGCCCCTGGGCCTCGTAGGG +
Preference number: 6 (lower is better)
Translates to: KAFSLARTAWAN*AVSSGPLGLVG
Trigger: CCCTACGAGGCCCAGGGGCCCAGAGGACACAGCCCAGTTGGCCCACGCCGTCCTGGCCAAGCTGAACGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS GCA 72 bp CTGGGCCAGCACCTCGAGCTGCCGCGTGCGCTCCTCTaGCCGGAAGGGGCAGTAGAGGTTGTAGGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: LGQHLELPRALL*PEGAVEVVGAV
Trigger: CACAGCACCTACAACCTCTACTGCCCCTTCCGGGCAGAGGAGCGCACGCGGCAGCTCGAGGTGCTGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000595950.5
ENST00000597068.5
ENST00000599648.1
CDS CCA 72 bp GGGCAGGTGCGTCCGCGCTGCCGAGCACGAAGTCGCTaGAGGTGCACACCTCGACGACACGCTCACAGATGG +
Preference number: 6 (lower is better)
Translates to: GQVRPRCRARSR*RCTPRRHAHRW
Trigger: CCATCTGTGAGCGTGTCGTCGAGGTGTGCACCTCCAGCGACTTCGTGCTCGGCAGCGCGGACGCACCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593535.5
CDS CCA 72 bp TCTGCCTTGAAGGCGTTCAGCTTGGCCAGGACGGCGTaGGCCAACTGGGCTGTGTCCTCTGGGCCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: SALKAFSLARTA*ANWAVSSGPLG
Trigger: GCCCAGGGGCCCAGAGGACACAGCCCAGTTGGCCCACGCCGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599737.5
CDS GCA 72 bp TGGCAATCTGCTGGGCCAGCACCTCGAGCTGCCGCGTaGGCTCCTCTGCCCGGAAGGGGCAGTAGAGGTTGT +
Preference number: 6 (lower is better)
Translates to: WQSAGPAPRAAA*APLPGRGSRGC
Trigger: ACAACCTCTACTGCCCCTTCCGGGCAGAGGAGCGCACGCGGCAGCTCGAGGTGCTGGCCCAGCAGATTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000595950.5
ENST00000597068.5
ENST00000599648.1
CDS CCA 72 bp TCTGCCTTGAAGGCGTTCAGCTTGGCCAGGACGGCGTaGGCCAACTGGGCTGTGTCCTCTGGGCCCTTGCGG +
Preference number: 6 (lower is better)
Translates to: SALKAFSLARTA*ANWAVSSGPLR
Trigger: CCGCAAGGGCCCAGAGGACACAGCCCAGTTGGCCCACGCCGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000594221.5
ENST00000595950.5
ENST00000597068.5
CDS CAA 72 bp TTCTCTGGGCCCTCGCCCAGACTGGGAGTGTCTGCCTaGAAGGCGTTCAGCTTGGCCAGGACGGCGTGGGCC +
Preference number: 6 (lower is better)
Translates to: FSGPSPRLGVSA*KAFSLARTAWA
Trigger: GGCCCACGCCGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGGCGAGGGCCCAGAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000594221.5
ENST00000597068.5
ENST00000599737.5
CDS CAA 90 bp GAGCGGGTTTTCTCTGGGCCCTCGCCCAGACTGGGAGTGTCTGCCTaGAAGGCGTTCAGCTTGGCCAGGACGGCGTGGGCCAACTGGGCT +
Preference number: 6 (lower is better)
Translates to: ERVFSGPSPRLGVSA*KAFSLARTAWANWA
Trigger: AGCCCAGTTGGCCCACGCCGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGGCGAGGGCCCAGAGAAAACCCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000594221.5
ENST00000597068.5
ENST00000599737.5
CDS GCA 72 bp GTGCGTCCGCGCTGCCGAGCACGAAGTCGCTGGAGGTaGACACCTCGACGACACGCTCACAGATGGGAGTTC +
Preference number: 6 (lower is better)
Translates to: VRPRCRARSRWR*TPRRHAHRWEF
Trigger: GAACTCCCATCTGTGAGCGTGTCGTCGAGGTGTGCACCTCCAGCGACTTCGTGCTCGGCAGCGCGGACGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593535.5
CDS GCA 72 bp CGCTGTCACCCCAATTCCTCAGCTGCGGGCTTGGCGTaGCCCCCTCAGCAGAGCAGATCGGTGCCAAGGGAA +
Preference number: 6 (lower is better)
Translates to: RCHPNSSAAGLA*PPQQSRSVPRE
Trigger: TTCCCTTGGCACCGATCTGCTCTGCTGAGGGGGGCACGCCAAGCCCGCAGCTGAGGAATTGGGGTGACAGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595800.1
CDS CAA 72 bp CCCAGACTGGGAGTGTCTGCCTTGAAGGCGTTCAGCTaGGCCAGGACGGCGTGGGCCAACTGGGCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: PRLGVSALKAFS*ARTAWANWAVS
Trigger: GGACACAGCCCAGTTGGCCCACGCCGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000594221.5
ENST00000595950.5
ENST00000597068.5
ENST00000599737.5
CDS TCA 72 bp CCAGACCCCAGGGTCCCAGTCCTGGTGACTTACCAATaGGCACCTCCCACTTGCCCTCGGTGGCCCTGGTCA +
Preference number: 6 (lower is better)
Translates to: PDPRVPVLVTYQ*APPTCPRWPWS
Trigger: TGACCAGGGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGTAAGTCACCAGGACTGGGACCCTGGGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595800.1
CDS GCA 72 bp GCTCCTCTGCCCGGAAGGGGCAGTAGAGGTTGTAGGTaGTGTGGGGAGCATCGAGGGAGAACACCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: APLPGRGSRGCR*CGEHRGRTPGP
Trigger: AGGCCCAGGTGTTCTCCCTCGATGCTCCCCACAGCACCTACAACCTCTACTGCCCCTTCCGGGCAGAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000595950.5
ENST00000597068.5
ENST00000599648.1
CDS GCA 72 bp GGTTTTCTCTGGGCCCTCGCCCAGACTGGGAGTGTCTaGCTTGAAGGCGTTCAGCTTGGCCAGGACGGCGTG +
Preference number: 6 (lower is better)
Translates to: GFLWALAQTGSV*LEGVQLGQDGV
Trigger: CACGCCGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGGCGAGGGCCCAGAGAAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000594221.5
ENST00000597068.5
ENST00000599737.5
CDS CCA 72 bp GCCAAGGCAGTGGGAGGGGCAGTTTCAAGGGCTGGCTaGGTGGGAGGACCCAGAACCCATTCACCCAACTCC +
Preference number: 6 (lower is better)
Translates to: AKAVGGAVSRAG*VGGPRTHSPNS
Trigger: GGAGTTGGGTGAATGGGTTCTGGGTCCTCCCACCCAGCCAGCCCTTGAAACTGCCCCTCCCACTGCCTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597467.1
CDS CCA 72 bp AGGGGCCAAGGCAGTGGGAGGGGCAGTTTCAAGGGCTaGCTGGGTGGGAGGACCCAGAACCCATTCACCCAA +
Preference number: 6 (lower is better)
Translates to: RGQGSGRGSFKG*LGGRTQNPFTQ
Trigger: TTGGGTGAATGGGTTCTGGGTCCTCCCACCCAGCCAGCCCTTGAAACTGCCCCTCCCACTGCCTTGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597467.1
CDS CCA 72 bp ACAGTCAGGGGTTCCCACGCTCAGGTCCCATCTCACTaGGGACGCGTTCACTCACTGGTGATGCCCTCAGCC +
Preference number: 6 (lower is better)
Translates to: TVRGSHAQVPSH*GRVHSLVMPSA
Trigger: GGCTGAGGGCATCACCAGTGAGTGAACGCGTCCCCAGTGAGATGGGACCTGAGCGTGGGAACCCCTGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597467.1
ENST00000599905.1
CDS CCA 72 bp TCTGCATTCTTGGGACCCCACATCCAGAGTCCACCCTaGGAGTCCCACACAGGGCTCCACGAGGGAGCTGCA +
Preference number: 6 (lower is better)
Translates to: SAFLGPHIQSPP*ESHTGLHEGAA
Trigger: TGCAGCTCCCTCGTGGAGCCCTGTGTGGGACTCCCAGGGTGGACTCTGGATGTGGGGTCCCAAGAATGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597467.1
ENST00000599905.1
CDS CAA 90 bp GGGCTGTCCGTGCAGGGAGCTGCGTACTTGGGAGTTCTGGACGATTaGAGGGGATCCTACACTCAAGGGCTGAACCCTGGGAGAGGGGCA +
Preference number: 6 (lower is better)
Translates to: GLSVQGAAYLGVLDD*RGSYTQGLNPGRGA
Trigger: TGCCCCTCTCCCAGGGTTCAGCCCTTGAGTGTAGGATCCCCTCAAATCGTCCAGAACTCCCAAGTACGCAGCTCCCTGCACGGACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597467.1
ENST00000599905.1
CDS TCA 72 bp TTGGAGGCCAGTCTGGAGTCACACGAGGGGTGCTCATaGGGGCCAAAGACTTGGCAGCAGCCAGGGATCCCA +
Preference number: 6 (lower is better)
Translates to: LEASLESHEGCS*GPKTWQQPGIP
Trigger: TGGGATCCCTGGCTGCTGCCAAGTCTTTGGCCCTCATGAGCACCCCTCGTGTGACTCCAGACTGGCCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594221.5
CDS CAA 72 bp CACCACCTGGGGTCACCCATAGAAGGCTCTGCATTCTaGGGACCCCACATCCAGAGTCCACCCTGGGAGTCC +
Preference number: 6 (lower is better)
Translates to: HHLGSPIEGSAF*GPHIQSPPWES
Trigger: GGACTCCCAGGGTGGACTCTGGATGTGGGGTCCCAAGAATGCAGAGCCTTCTATGGGTGACCCCAGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597467.1
ENST00000599905.1
CDS CAA 90 bp AGAGGCGGGCCAAGGACATCCCCAGGATCCTCGGCAAGAGGACATTaGGGTCCTACCTCATCTCAGCACCAGGTCTCTCAAGGTCCCACC +
Preference number: 6 (lower is better)
Translates to: RGGPRTSPGSSARGH*GPTSSQHQVSQGPT
Trigger: GGTGGGACCTTGAGAGACCTGGTGCTGAGATGAGGTAGGACCCAAATGTCCTCTTGCCGAGGATCCTGGGGATGTCCTTGGCCCGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593854.5
CDS GCA 72 bp GGATCCGGTCCCCGTGTGCACGCACTTGGACACATCTaGGATATGCATGTGGCGAAGCTCCACCCACAAGTC +
Preference number: 6 (lower is better)
Translates to: GSGPRVHALGHI*DMHVAKLHPQV
Trigger: GACTTGTGGGTGGAGCTTCGCCACATGCATATCGCAGATGTGTCCAAGTGCGTGCACACGGGGACCGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594221.5
CDS CAA 90 bp CCCAGCTGCTCCAGGTTACGGATGAGGCTGCTGTGCGCCTGTACATaGGCATGCTGGATCAGCTTGGCCAGGTTCTCCTCACTCACACCT +
Preference number: 6 (lower is better)
Translates to: PSCSRLRMRLLCACT*ACWISLARFSSLTP
Trigger: AGGTGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS CAA 90 bp CGGATGAGGCTGCTGTGCGCCTGTACATTGGCATGCTGGATCAGCTaGGCCAGGTTCTCCTCACTCACACCTCAGTGGAGGAATCCCCAA +
Preference number: 6 (lower is better)
Translates to: RMRLLCACTLACWIS*ARFSSLTPQWRNPQ
Trigger: TTGGGGATTCCTCCACTGAGGTGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAGCCTCATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS TCA 72 bp CTATGTCCAGCAGATCATACGCCATGGCCTGGAACGTaGGCTCATGCAGTAGTGGGGACACGGGGTCAGCTG +
Preference number: 6 (lower is better)
Translates to: LCPADHTPWPGT*AHAVVGTRGQL
Trigger: CAGCTGACCCCGTGTCCCCACTACTGCATGAGCTCACGTTCCAGGCCATGGCGTATGATCTGCTGGACATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000594221.5
ENST00000595861.1
ENST00000597068.5
ENST00000599737.5
CDS GCA 72 bp GTCCCCGTGTGCACGCACTTGGACACATCTGCGATATaGATGTGGCGAAGCTCCACCCACAAGTCATCGTCC +
Preference number: 6 (lower is better)
Translates to: VPVCTHLDTSAI*MWRSSTHKSSS
Trigger: GGACGATGACTTGTGGGTGGAGCTTCGCCACATGCATATCGCAGATGTGTCCAAGTGCGTGCACACGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594221.5
CDS CAA 72 bp GTGCAGGGAGCTGCGTACTTGGGAGTTCTGGACGATTaGAGGGGATCCTACACTCAAGGGCTGAACCCTGGG +
Preference number: 6 (lower is better)
Translates to: VQGAAYLGVLDD*RGSYTQGLNPG
Trigger: CCCAGGGTTCAGCCCTTGAGTGTAGGATCCCCTCAAATCGTCCAGAACTCCCAAGTACGCAGCTCCCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597467.1
ENST00000599905.1
CDS CAA 72 bp CTGCTGTGCGCCTGTACATTGGCATGCTGGATCAGCTaGGCCAGGTTCTCCTCACTCACACCTCAGTGGAGG +
Preference number: 6 (lower is better)
Translates to: LLCACTLACWIS*ARFSSLTPQWR
Trigger: CCTCCACTGAGGTGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS GCA 72 bp TTTGGTCACATGATCCGGGCTGTCCGTGCAGGGAGCTaGGTACTTGGGAGTTCTGGACGATTTGAGGGGATC +
Preference number: 6 (lower is better)
Translates to: FGHMIRAVRAGS*VLGSSGRFEGI
Trigger: GATCCCCTCAAATCGTCCAGAACTCCCAAGTACGCAGCTCCCTGCACGGACAGCCCGGATCATGTGACCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597467.1
ENST00000599905.1
CDS CCA 72 bp ATTCACCCAACTCCACCCATGTGGACAGGCAGTTCTTaGGGGTCCCACATTCAGGGTCTTCCCCATAGGCCT +
Preference number: 6 (lower is better)
Translates to: IHPTPPMWTGSS*GSHIQGLPHRP
Trigger: AGGCCTATGGGGAAGACCCTGAATGTGGGACCCCCAAGAACTGCCTGTCCACATGGGTGGAGTTGGGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597467.1
CDS CCA 72 bp TGCTGTGCGCCTGTACATTGGCATGCTGGATCAGCTTaGCCAGGTTCTCCTCACTCACACCTCAGTGGAGGA +
Preference number: 6 (lower is better)
Translates to: CCAPVHWHAGSA*PGSPHSHLSGG
Trigger: TCCTCCACTGAGGTGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAATGTACAGGCGCACAGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS TCA 72 bp AGGTCCCATCTCACTGGGGACGCGTTCACTCACTGGTaGTGCCCTCAGCCAGGATATCTGACATTTTGCAGC +
Preference number: 6 (lower is better)
Translates to: RSHLTGDAFTHW*CPQPGYLTFCS
Trigger: GCTGCAAAATGTCAGATATCCTGGCTGAGGGCATCACCAGTGAGTGAACGCGTCCCCAGTGAGATGGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597467.1
ENST00000599905.1
CDS GCA 72 bp CAAACATGGACGGACGGGGACATGTATATGTGCAAATaGACACTAGTGTCGCACCCACATGGGCACACGCGC +
Preference number: 6 (lower is better)
Translates to: QTWTDGDMYMCK*TLVSHPHGHTR
Trigger: GCGCGTGTGCCCATGTGGGTGCGACACTAGTGTGCATTTGCACATATACATGTCCCCGTCCGTCCATGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612033.1
CDS CCA 72 bp CAAGGACATCCCCAGGATCCTCGGCAAGAGGACATTTaGGTCCTACCTCATCTCAGCACCAGGTCTCTCAAG +
Preference number: 6 (lower is better)
Translates to: QGHPQDPRQEDI*VLPHLSTRSLK
Trigger: CTTGAGAGACCTGGTGCTGAGATGAGGTAGGACCCAAATGTCCTCTTGCCGAGGATCCTGGGGATGTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593854.5
CDS CCA 72 bp GTATATGTGCAAATGCACACTAGTGTCGCACCCACATaGGCACACGCGCACACACACAGATGCACGCACGCA +
Preference number: 6 (lower is better)
Translates to: VYVQMHTSVAPT*AHAHTHRCTHA
Trigger: TGCGTGCGTGCATCTGTGTGTGTGCGCGTGTGCCCATGTGGGTGCGACACTAGTGTGCATTTGCACATATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612033.1
CDS CAA 72 bp ATGGCCTCCAGACTGGGAATGGGTTCCCGCCGTTTGTaGATGTCTTCAACAATGGTGATGCCCTCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: MASRLGMGSRRL*MSSTMVMPSAR
Trigger: CCTGGCTGAGGGCATCACCATTGTTGAAGACATCAACAAACGGCGGGAACCCATTCCCAGTCTGGAGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000593535.5
ENST00000595181.5
ENST00000597068.5
ENST00000599737.5
CDS CAA 72 bp CCAAGGACATCCCCAGGATCCTCGGCAAGAGGACATTaGGGTCCTACCTCATCTCAGCACCAGGTCTCTCAA +
Preference number: 6 (lower is better)
Translates to: PRTSPGSSARGH*GPTSSQHQVSQ
Trigger: TTGAGAGACCTGGTGCTGAGATGAGGTAGGACCCAAATGTCCTCTTGCCGAGGATCCTGGGGATGTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593854.5
CDS GCA 72 bp CCCATGGCCAGGTCCTTATTCAGCTCCTTCTGGTACTaGGGCATCTTTTTCAGGATCTGGGATAGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: PMARSLFSSFWY*GIFFRIWDRSL
Trigger: CAAAGACCTATCCCAGATCCTGAAAAAGATGCCGCAGTACCAGAAGGAGCTGAATAAGGACCTGGCCATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597068.5
CDS CCA 72 bp TCACTGGGGACCCACGAATCTAATTCCATAACTCCTTaGGTACCCAGAAGTCTAAACCCACAGTTCCTCGGC +
Preference number: 6 (lower is better)
Translates to: SLGTHESNSITP*VPRSLNPQFLG
Trigger: GCCGAGGAACTGTGGGTTTAGACTTCTGGGTACCCAAGGAGTTATGGAATTAGATTCGTGGGTCCCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595800.1
CDS TCA 72 bp ATTTTGCAGCAGGAAGACAAGATGCGCATGCTTGGGTaGTCCATGATAAGCACCTTCCACTCCCCATCCTTC +
Preference number: 6 (lower is better)
Translates to: ILQQEDKMRMLG*SMISTFHSPSF
Trigger: GAAGGATGGGGAGTGGAAGGTGCTTATCATGGATCACCCAAGCATGCGCATCTTGTCTTCCTGCTGCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000221283.10
ENST00000414284.6
ENST00000441779.6
ENST00000593535.5
ENST00000595181.5
ENST00000595950.5
ENST00000597068.5
ENST00000599737.5
ENST00000599905.1
CDS TCA 72 bp ATTTTGCAGCAGGAAGACAAGATGCGCATGCTTGGGTaGTCCATGATAAGCACCTGTCCAGATGGATGGACA +
Preference number: 6 (lower is better)
Translates to: ILQQEDKMRMLG*SMISTCPDGWT
Trigger: TGTCCATCCATCTGGACAGGTGCTTATCATGGATCACCCAAGCATGCGCATCTTGTCTTCCTGCTGCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597467.1