RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STXBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000136854

Ensembl transcript IDs: ENST00000373299.5, ENST00000373302.8, ENST00000476182.3, ENST00000494254.3, ENST00000496504.3, ENST00000626333.1, ENST00000626416.2, ENST00000626539.3, ENST00000627871.2, ENST00000628768.1, ENST00000630492.2, ENST00000635950.2, ENST00000636509.2, ENST00000636962.2, ENST00000637060.2, ENST00000637173.2, ENST00000637464.2, ENST00000637521.2, ENST00000637953.1, ENST00000647107.1, ENST00000650920.1

Found 2149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCGGCCACGGCAGGGCAGAGCCCCGCAACCAGGGAGATTGCAGACTaGGGCGCTGGGCGGCGGACACCGAAGCTCTCCTCATCTCCCGAG +
Preference number: 1 (lower is better)
Translates to: SATAGQSPATREIAD*GAGRRTPKLSSSPE
Trigger: CTCGGGAGATGAGGAGAGCTTCGGTGTCCGCCGCCCAGCGCCGCAGTCTGCAATCTCCCTGGTTGCGGGGCTCTGCCCTGCCGTGGCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR GCA 90 bp GAAGCGTTCGGCCACGGCAGGGCAGAGCCCCGCAACCAGGGAGATTaGAGACTGCGGCGCTGGGCGGCGGACACCGAAGCTCTCCTCATC +
Preference number: 1 (lower is better)
Translates to: EAFGHGRAEPRNQGD*RLRRWAADTEALLI
Trigger: GATGAGGAGAGCTTCGGTGTCCGCCGCCCAGCGCCGCAGTCTGCAATCTCCCTGGTTGCGGGGCTCTGCCCTGCCGTGGCCGAACGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR CCA 90 bp GCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAAGGGAGGCGGAGGTaGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACTAGAC +
Preference number: 1 (lower is better)
Translates to: ASREGGEQALKGRRR*RRARVQHFERTSLD
Trigger: GTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR GCA 90 bp ATCACTGAACACGAGAATGCAGCGGCAACAGTGCCAGCCAGGGCGTaGAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCG +
Preference number: 1 (lower is better)
Translates to: ITEHENAAATVPARA*RAGEATDAKELRRA
Trigger: CGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTGGCTGGCACTGTTGCCGCTGCATTCTCGTGTTCAGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR CCA 90 bp CCCCAGTGTAAGGCGGCTACAGATCTAACGCAAGCAACGGGGACCTaGGTCCAGAAGACTCCATGCCACAGCCGGAGGTGGTCGCCTCCT +
Preference number: 1 (lower is better)
Translates to: PQCKAATDLTQATGT*VQKTPCHSRRWSPP
Trigger: AGGAGGCGACCACCTCCGGCTGTGGCATGGAGTCTTCTGGACCCAGGTCCCCGTTGCTTGCGTTAGATCTGTAGCCGCCTTACACTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637173.2
3UTR TCA 90 bp GTGCAGACACCCCAGCCTCCACCCACAGCTGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTC +
Preference number: 1 (lower is better)
Translates to: VQTPQPPPTAALPGV*DAGKGKEVCSTLDL
Trigger: GAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTGGGTGGAGGCTGGGGTGTCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 90 bp TCATCCAAACCCATAAACAACCATTTCCTCCCTGCCACCGTGGTCTaGGCTCCCGAAGCGTTCGGCCACGGCAGGGCAGAGCCCCGCAAC +
Preference number: 1 (lower is better)
Translates to: SSKPINNHFLPATVV*APEAFGHGRAEPRN
Trigger: GTTGCGGGGCTCTGCCCTGCCGTGGCCGAACGCTTCGGGAGCTCAGACCACGGTGGCAGGGAGGAAATGGTTGTTTATGGGTTTGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR GCA 90 bp GGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTaGGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGA +
Preference number: 1 (lower is better)
Translates to: GDRTSSGSKTPGAGA*GSVLRKSGRISWEG
Trigger: TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR GCA 90 bp CATGTGGTGCCTTTCATCCAAACCCATAAACAACCATTTCCTCCCTaGCACCGTGGTCTGAGCTCCCGAAGCGTTCGGCCACGGCAGGGC +
Preference number: 1 (lower is better)
Translates to: HVVPFIQTHKQPFPP*HRGLSSRSVRPRQG
Trigger: GCCCTGCCGTGGCCGAACGCTTCGGGAGCTCAGACCACGGTGGCAGGGAGGAAATGGTTGTTTATGGGTTTGGATGAAAGGCACCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR GCA 90 bp GGGTCCAGAAGACTCCATGCCACAGCCGGAGGTGGTCGCCTCCTCTaGGATGAACCACTGCAAAAGCTTTCTCCTTCCGTTGCCCAAAGG +
Preference number: 1 (lower is better)
Translates to: GSRRLHATAGGGRLL*DEPLQKLSPSVAQR
Trigger: CCTTTGGGCAACGGAAGGAGAAAGCTTTTGCAGTGGTTCATCGCAGAGGAGGCGACCACCTCCGGCTGTGGCATGGAGTCTTCTGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637173.2
3UTR CCA 90 bp ACCCCAGCCTCCACCCACAGCTGCACTACCGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATA +
Preference number: 1 (lower is better)
Translates to: TPASTHSCTTGGMRR*ERQRGLFHLGPPEI
Trigger: TATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTGGGTGGAGGCTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 90 bp TGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGGCACTGTaGCTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGAC +
Preference number: 1 (lower is better)
Translates to: WRLPAGVCFSPVRAL*LRLEDFPRDHSTVD
Trigger: GTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 90 bp CAGAAGACTCCATGCCACAGCCGGAGGTGGTCGCCTCCTCTGCGATaGACCACTGCAAAAGCTTTCTCCTTCCGTTGCCCAAAGGAAAGC +
Preference number: 1 (lower is better)
Translates to: QKTPCHSRRWSPPLR*TTAKAFSFRCPKES
Trigger: GCTTTCCTTTGGGCAACGGAAGGAGAAAGCTTTTGCAGTGGTTCATCGCAGAGGAGGCGACCACCTCCGGCTGTGGCATGGAGTCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637173.2
3UTR CCA 90 bp AGGGCCTGGGCCACAGGCTCCAGACTAACTGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGGCACTG +
Preference number: 1 (lower is better)
Translates to: RAWATGSRLTVFPKR*RLPAGVCFSPVRAL
Trigger: CAGTGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGTCTGGAGCCTGTGGCCCAGGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 90 bp TCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTaGGAGGACATCACTAGACAAGTAATACACACATGGCCTGCAGGA +
Preference number: 1 (lower is better)
Translates to: SEREAEVAPSSRTAL*EDITRQVIHTWPAG
Trigger: TCCTGCAGGCCATGTGTGTATTACTTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 90 bp CTCAATAGTGTCCTCCATGATGTCCTTGATAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTCGCTGATGCGTTCCTTCCGCTCCGG +
Preference number: 1 (lower is better)
Translates to: LNSVLHDVLDNRSPP*ELVGLLADAFLPLR
Trigger: CCGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACCAGCTCTCACGGTGGACTCCGATTATCAAGGACATCATGGAGGACACTATTGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR TCA 90 bp CCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGACTAGGGAAAATGAGCTGTTGGGAT +
Preference number: 1 (lower is better)
Translates to: PLFRGLQNPSVLVHS*PLNEGGLGKMSCWD
Trigger: ATCCCAACAGCTCATTTTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 90 bp GATAATCTGACTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTaGGTCCAACGGGCCAAGAACCTTCTCCACAGCCATAGCCCTCTG +
Preference number: 1 (lower is better)
Translates to: DNLTEDACREGTGSV*VQRAKNLLHSHSPL
Trigger: CAGAGGGCTATGGCTGTGGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAGATTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 90 bp CACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATaGGAGCTGCTGAGTCTTGAGGATGGCGAGACAGCCTTCCTGCAT +
Preference number: 1 (lower is better)
Translates to: HDNSSSTNGVLTTGE*ELLSLEDGETAFLH
Trigger: ATGCAGGAAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 90 bp GCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTaGGTCTTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTT +
Preference number: 1 (lower is better)
Translates to: AAAQMVCSPLENESC*VLRMARQPSCICCF
Trigger: AAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR GCA 90 bp TTCCACACATATCACCAATCTTATTTAGCACTGTGGATGCCGTTTTaGAAATGTCACCCACCATCAGCCCTCGCTCCGCTGCGGCCGCCA +
Preference number: 1 (lower is better)
Translates to: FHTYHQSYLALWMPF*KCHPPSALAPLRPP
Trigger: TGGCGGCCGCAGCGGAGCGAGGGCTGATGGTGGGTGACATTTGCAAAACGGCATCCACAGTGCTAAATAAGATTGGTGATATGTGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR TCA 90 bp AGAGAAAGGGAAACCAACATCTTCGACAAACAAGGTCCTGAAGCATaGGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGA +
Preference number: 1 (lower is better)
Translates to: RERETNIFDKQGPEA*ALFGPREGTEQAAG
Trigger: TCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCGAAGATGTTGGTTTCCCTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR GCA 90 bp GCCATGTTGGTGATGATCTCACTATCCTCCGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGGTTTTCCTCCGTGATGCCATTCTTC +
Preference number: 1 (lower is better)
Translates to: AMLVMISLSSGGIWA*WISLFRFSSVMPFF
Trigger: GAAGAATGGCATCACGGAGGAAAACCTGAACAAACTGATCCAGCACGCCCAGATACCCCCGGAGGATAGTGAGATCATCACCAACATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR TCA 90 bp GAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTaGGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCA +
Preference number: 1 (lower is better)
Translates to: ETLGKAKRSVPPWTS*DILIVTSQVIWMRA
Trigger: TGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 90 bp CACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGTCTTaGGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCT +
Preference number: 1 (lower is better)
Translates to: HKWCAHHWRMRAAES*GWRDSLPAFAALVS
Trigger: AGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 90 bp ATGTATCCTGGGCACACATACCTGAGGTTGTCTAGGACACACACCTaGCCACAGACTTGCTGGCTCACAGGACATGCATACCTTCAACTT +
Preference number: 1 (lower is better)
Translates to: MYPGHTYLRLSRTHT*PQTCWLTGHAYLQL
Trigger: AAGTTGAAGGTATGCATGTCCTGTGAGCCAGCAAGTCTGTGGTCAGGTGTGTGTCCTAGACAACCTCAGGTATGTGTGCCCAGGATACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR TCA 90 bp AGAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTaGGCTTCTACAGCCCTTTGTATTTACTGGGTAGAAAGAGCAGGG +
Preference number: 1 (lower is better)
Translates to: RRRGLPASTEQKQQL*ASTALCIYWVERAG
Trigger: CCCTGCTCTTTCTACCCAGTAAATACAAAGGGCTGTAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR CCA 90 bp ATGTTGGTGATGATCTCACTATCCTCCGGGGGTATCTGGGCGTGCTaGATCAGTTTGTTCAGGTTTTCCTCCGTGATGCCATTCTTCAAA +
Preference number: 1 (lower is better)
Translates to: MLVMISLSSGGIWAC*ISLFRFSSVMPFFK
Trigger: TTTGAAGAATGGCATCACGGAGGAAAACCTGAACAAACTGATCCAGCACGCCCAGATACCCCCGGAGGATAGTGAGATCATCACCAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR GCA 90 bp CTTGCTGGCTCACAGGACATGCATACCTTCAACTTTACTAGACACTaGCAAGTGGTTTTCAAAGGGGCTACACCAGCAGACATTCCATCA +
Preference number: 1 (lower is better)
Translates to: LAGSQDMHTFNFTRH*QVVFKGATPADIPS
Trigger: TGATGGAATGTCTGCTGGTGTAGCCCCTTTGAAAACCACTTGGCAGTGTCTAGTAAAGTTGAAGGTATGCATGTCCTGTGAGCCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR CCA 90 bp AAGGCACTGTTTTTCCACACATATCACCAATCTTATTTAGCACTGTaGATGCCGTTTTGCAAATGTCACCCACCATCAGCCCTCGCTCCG +
Preference number: 1 (lower is better)
Translates to: KALFFHTYHQSYLAL*MPFCKCHPPSALAP
Trigger: CGGAGCGAGGGCTGATGGTGGGTGACATTTGCAAAACGGCATCCACAGTGCTAAATAAGATTGGTGATATGTGTGGAAAAACAGTGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR TCA 90 bp AAAGGAAAGCCAGACTGGAGCCCCCTGGACACCGGGAAGGGGTGCTaGTTTCTTTATTTATTAGACTCAAGTGCTTTAGTACAGAATGGT +
Preference number: 1 (lower is better)
Translates to: KGKPDWSPLDTGKGC*FLYLLDSSALVQNG
Trigger: ACCATTCTGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637173.2
ENST00000650920.1
3UTR TCA 90 bp TGGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATaGGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGAG +
Preference number: 1 (lower is better)
Translates to: WAADAVCQFANILHL*EQFAVYPCSLQDTE
Trigger: CTCAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR TCA 90 bp CACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCC +
Preference number: 1 (lower is better)
Translates to: HTTQGIMKYLKLRII*LKMLAERVQGLCES
Trigger: GGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 90 bp GCTGGGGAGCGGCTCTCTGCGCTTATTGATATCTTCCACAACATGTaGTCCAGCAATCCTGCTCCTTATTATTCACCAAAAGTTATAGCA +
Preference number: 1 (lower is better)
Translates to: AGERLSALIDIFHNM*SSNPAPYYSPKVIA
Trigger: TGCTATAACTTTTGGTGAATAATAAGGAGCAGGATTGCTGGATCACATGTTGTGGAAGATATCAATAAGCGCAGAGAGCCGCTCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR TCA 90 bp GAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGAGTTaGTCACGACCCTCACTCTTTCAGCCTGCAACATTGAAGCTTTAT +
Preference number: 1 (lower is better)
Translates to: ENSLLFTHVASRILS*SRPSLFQPATLKLY
Trigger: ATAAAGCTTCAATGTTGCAGGCTGAAAGAGTGAGGGTCGTGATCAACTCAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
3UTR GCA 90 bp AGCCTCCAGGATACTGAGTTGATCACGACCCTCACTCTTTCAGCCTaGAACATTGAAGCTTTATATAAATGCACTATCCTGTCTGTGTCC +
Preference number: 1 (lower is better)
Translates to: SLQDTELITTLTLSA*NIEALYKCTILSVS
Trigger: GGACACAGACAGGATAGTGCATTTATATAAAGCTTCAATGTTGCAGGCTGAAAGAGTGAGGGTCGTGATCAACTCAGTATCCTGGAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
3UTR GCA 90 bp ACGACCCTCACTCTTTCAGCCTGCAACATTGAAGCTTTATATAAATaGACTATCCTGTCTGTGTCCTCCCATAATGTGCTCTTTTCACTC +
Preference number: 1 (lower is better)
Translates to: TTLTLSACNIEALYK*TILSVSSHNVLFSL
Trigger: GAGTGAAAAGAGCACATTATGGGAGGACACAGACAGGATAGTGCATTTATATAAAGCTTCAATGTTGCAGGCTGAAAGAGTGAGGGTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636962.2
3UTR GCA 90 bp GAGAAATGCAATATTGATTTCCGTCAGAGTTTTGATGACTTTGGCTaGTCGGGATTTTACCAGTTCATTAAACAGGGCATCTGGACAAGA +
Preference number: 1 (lower is better)
Translates to: EKCNIDFRQSFDDFG*SGFYQFIKQGIWTR
Trigger: TCTTGTCCAGATGCCCTGTTTAATGAACTGGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAATCAATATTGCATTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR GCA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTaGTTTAGAGCTAAGTTTTATACAGAGAATAAAATGACCATCTTC +
Preference number: 1 (lower is better)
Translates to: LRMARQPSCICCFSF*FRAKFYTENKMTIF
Trigger: GAAGATGGTCATTTTATTCTCTGTATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 90 bp CTGTGTCCTCCCATAATGTGCTCTTTTCACTCATTGTTAAGTGTCTaGGATCTATTCATGTTGACATATGCAACTGTGTGTCATGCATTT +
Preference number: 1 (lower is better)
Translates to: LCPPIMCSFHSLLSV*DLFMLTYATVCHAF
Trigger: AAATGCATGACACACAGTTGCATATGTCAACATGAATAGATCTCAGACACTTAACAATGAGTGAAAAGAGCACATTATGGGAGGACACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636962.2
3UTR TCA 90 bp ACAGAGAATAAAATGACCATCTTCTCTTACAAACACGATGATGTATaGCCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGG +
Preference number: 1 (lower is better)
Translates to: TENKMTIFSYKHDDV*PHTTQGIMKYLKLR
Trigger: CCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTTGTAAGAGAAGATGGTCATTTTATTCTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR CAA 90 bp CGAAGCGTTCGGCCACGGCAGGGCAGAGCCCCGCAACCAGGGAGATaGCAGACTGCGGCGCTGGGCGGCGGACACCGAAGCTCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: RSVRPRQGRAPQPGR*QTAALGGGHRSSPH
Trigger: ATGAGGAGAGCTTCGGTGTCCGCCGCCCAGCGCCGCAGTCTGCAATCTCCCTGGTTGCGGGGCTCTGCCCTGCCGTGGCCGAACGCTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR-3UTR GCA 90 bp AAATGTCACCCACCATCAGCCCTCGCTCCGCTGCGGCCGCCACTCGCCGCCACCCGCAACCAGGGAGATTaGAGACTGCGGCGCTGGGCG +
Preference number: 2 (lower is better)
Translates to: KCHPPSALAPLRPPLAATRNQGD*RLRRWA
Trigger: CGCCCAGCGCCGCAGTCTGCAATCTCCCTGGTTGCG...GGTGGCGGCGAGTGGCGGCCGCAGCGGAGCGAGGGCTGATGGTGGGTGACATTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR-3UTR CCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTAAAGGGAGGCGGAGGTaGCGCCGAGCTCGCGTACAG +
Preference number: 2 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGKGRRR*RRARVQ
Trigger: CTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTT...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTCAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGQTQRN*GGRWWE
Trigger: TTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTG...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGCAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: AKELRRAVVGSCGALWDGQTQRN*GGRWWE
Trigger: TTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTG...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp ACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCCAGCGGTGGTGGGAAGCTaGGGAGCGCTGTGGGATGGG +
Preference number: 2 (lower is better)
Translates to: TGCGGGRWPDFVQTPQPPAVVGS*GALWDG
Trigger: CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGC...TGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGGACGCCCGGCGCAGGTaGCTGCGGTTCCGTCCTAAG +
Preference number: 2 (lower is better)
Translates to: QALKGRRRWRRARVQHFEDARRR*LRFRPK
Trigger: CTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTC...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTAGCTGCGGAGCGCTGTaGGATGGGGGCGTGTTTTGG +
Preference number: 2 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGSCGAL*DGGVFW
Trigger: CCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCT...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGGCTGGCCTGACTTCGTaGAGACACCCCAGCCTCCAC +
Preference number: 2 (lower is better)
Translates to: EATDAKELRRAVVGSCGAAGLTS*RHPSLH
Trigger: GTGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGC...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGCAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 2 (lower is better)
Translates to: TDAKELRRAVVGSCGALWQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 2 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVGGMRR*ERQRGL
Trigger: CAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCC...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: EATDAKELRRAVVGSCGAGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 2 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR CAA 90 bp AGAGGAACCTTAAGGCCGGAGGAGGAGTCCAGGCCAGCTCCTCACTaGGGGGACACACGGGAGGCCACTCCAGCAGACTGGTGCACTGCC +
Preference number: 2 (lower is better)
Translates to: RGTLRPEEESRPAPH*GDTREATPADWCTA
Trigger: GGCAGTGCACCAGTCTGCTGGAGTGGCCTCCCGTGTGTCCCCCAAGTGAGGAGCTGGCCTGGACTCCTCCTCCGGCCTTAAGGTTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496504.3
3UTR-3UTR GCA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTGCTGGCCTGACTTCGTaGAGACACCCCAGCCTCCAC +
Preference number: 2 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPAGLTS*RHPSLH
Trigger: GTGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGC...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGCCCGGCGCAGGTGCCTaGGGTTCCGTCCTAAGGAAA +
Preference number: 2 (lower is better)
Translates to: QALKGRRRWRRARVQHFEPGAGA*GSVLRK
Trigger: TTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGG...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTAGCTGCGGAGCGCTGTaGGATGGGGGCGTGTTTTGG +
Preference number: 2 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPSCGAL*DGGVFW
Trigger: CCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCT...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 2 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 2 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373302.8
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: AKELRRAVVGSCGALWDGRRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTCAAGGTCCTGAAGCATaGGCACTGTTTGGTCCGAGG +
Preference number: 2 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGQGPEA*ALFGPR
Trigger: CCTCGGACCAAACAGTGCTCATGCTTCAGGACCTTG...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTCAGTCCTCAGCAAGGTaGAGGTGGGTGGAGTACTTG +
Preference number: 2 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGQSSAR*RWVEYL
Trigger: CAAGTACTCCACCCACCTGCACCTTGCTGAGGACTG...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGTGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGTGTTGGGATGATGCCTaGGGACAGAAGGGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: QALKGRRRWRRARVQHFECWDDA*GQKGLG
Trigger: GCCCAGGCCCTTCTGTCCCCAGGCATCATCCCAACA...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp AAACAACCATTTCCTCCCTGCCACCGTGGTCTGAGCTCCCGAAGCGTTCGGCCATGCAGACTGCGGCGCTaGGCGGCGGACACCGAAGCT +
Preference number: 2 (lower is better)
Translates to: KQPFPPCHRGLSSRSVRPCRLRR*AADTEA
Trigger: AGCTTCGGTGTCCGCCGCCCAGCGCCGCAGTCTGCA...TGGCCGAACGCTTCGGGAGCTCAGACCACGGTGGCAGGGAGGAAATGGTTGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR-3UTR TCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCCAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPQTQRN*GGRWWE
Trigger: TTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTG...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKRRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTAAAACAACACAGCTaGGCTCTGCGGTCTGAACTC +
Preference number: 2 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVLKQHS*ALRSEL
Trigger: GAGTTCAGACCGCAGAGCTCAGCTGTGTTGTTTTAA...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR GCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAGACGCCCGGCGCAGGTaGCTGCGGTTCCGTCCTAAG +
Preference number: 2 (lower is better)
Translates to: LKMLAERVQGLCESNGPRDARRR*LRFRPK
Trigger: CTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTC...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGTTCCTGGGACACCTCTaGGATGTGCTTGTGGCGCAG +
Preference number: 2 (lower is better)
Translates to: QALKGRRRWRRARVQHFEFLGHL*DVLVAQ
Trigger: CTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAA...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGCAGCATCTGTGCCCATaGCCAGGTCCATGGACAGTG +
Preference number: 2 (lower is better)
Translates to: QALKGRRRWRRARVQHFEQHLCP*PGPWTV
Trigger: CACTGTCCATGGACCTGGCCATGGGCACAGATGCTG...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636509.2
3UTR-3UTR TCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: QALKGRRRWRRARVQHFERRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTCGACAAACAAGGTCCTaGAGCATGAGCACTGTTTGG +
Preference number: 2 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGRQTRS*SMSTVW
Trigger: CCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCG...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGCTGGACAAGAGTCAGTaGAGAAGACGTGTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: QALKGRRRWRRARVQHFELDKSQ*RRRVQP
Trigger: GGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAG...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR TCA 90 bp GACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGGGGTAGGTCTGCTCGCTaGTGCGTTCCTTCCGCTCCG +
Preference number: 2 (lower is better)
Translates to: DLDWRTSLGITALWTQAGGRSAR*CVPSAP
Trigger: CGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACC...CCCAGCCTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR GCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTCATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 2 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp AAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACAATACACACATGGCCTaGAGGAGGTCAAGGGCGGCG +
Preference number: 2 (lower is better)
Translates to: KGGGGGAELAYSTLRGHHNTHMA*RRSRAA
Trigger: CGCCGCCCTTGACCTCCTGCAGGCCATGTGTGTATT...GTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCACAGGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: PRGYRVCVSPTGQEPSPQGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...CTGTGGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCACTGTGACTTAGACTaGAGGACTTCCCTCGGGATC +
Preference number: 2 (lower is better)
Translates to: EATDAKELRRAVVGSCGAHCDLD*RTSLGI
Trigger: GATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGAAAGGGAGGCGGAGGTaGCGCCGAGCTCGCGTACAG +
Preference number: 2 (lower is better)
Translates to: KALRREHHNAASREGGEQKGRRR*RRARVQ
Trigger: CTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTT...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCCAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: MLAERVQGLCESNGPRTFQTQRN*GGRWWE
Trigger: TTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTG...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACAATGAGCTGTTGGGATaGTGCCTGGGGACAGAAGGG +
Preference number: 2 (lower is better)
Translates to: KGGGGGAELAYSTLRGHHNELLG*CLGTEG
Trigger: CCCTTCTGTCCCCAGGCATCATCCCAACAGCTCATT...GTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGTACAGGGTCTGTGTaGGTCCAACGGGCCAAGAAC +
Preference number: 2 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPGTGSV*VQRAKN
Trigger: GTTCTTGGCCCGTTGGACTCACACAGACCCTGTACC...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCGCCTCCACCCACAGCTaGACTACCGGGGGTATGAGA +
Preference number: 2 (lower is better)
Translates to: LAERVQGLCESNGPRTFSASTHS*TTGGMR
Trigger: TCTCATACCCCCGGTAGTGCAGCTGTGGGTGGAGGC...GGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGGCAGCACAAATGGTGTaGTCACCACTGGAGAATGAG +
Preference number: 2 (lower is better)
Translates to: EATDAKELRRAVVGSCGAAAQMV*SPLENE
Trigger: CTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGC...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGCAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 2 (lower is better)
Translates to: KALRREHHNAASREGGEQQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCTGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: LKMLAERVQGLCESNGPRGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTT +
Preference number: 2 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGVFPKR*RLPAGV
Trigger: AACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAAC...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 2 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAGGAGCGTGCCTTGTCTaGGCCCTCCCCCATTGTTGG +
Preference number: 2 (lower is better)
Translates to: LKMLAERVQGLCESNGPRGACLV*ALPHCW
Trigger: CCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCC...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR CAA 90 bp GTCGCCTCCTCTGCGATGAACCACTGCAAAAGCTTTCTCCTTCCGTaGCCCAAAGGAAAGCCAGACTGGAGCCCCCTGGACACCGGGAAG +
Preference number: 2 (lower is better)
Translates to: VASSAMNHCKSFLLP*PKGKPDWSPLDTGK
Trigger: CTTCCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTTTGGGCAACGGAAGGAGAAAGCTTTTGCAGTGGTTCATCGCAGAGGAGGCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637173.2
3UTR-3UTR TCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPRRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGCCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 2 (lower is better)
Translates to: QALKGRRRWRRARVQHFEPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAG +
Preference number: 2 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGKLRII*LKMLAE
Trigger: CTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTT...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GCTGATGCGTTCCTTCCGCTCCGGCTTGCTCCGGCGACGCAGCGTGGAATCGGTTCCTCCCTTGAATGGTaGGCTCTTCTCTTGAGGTTT +
Preference number: 2 (lower is better)
Translates to: ADAFLPLRLAPATQRGIGSSLEW*ALLLRF
Trigger: AAACCTCAAGAGAAGAGCTCACCATTCAAGGGAGGA...ACCGATTCCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGAACGCATCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR GCA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTGCTGGCCTGACTTCGTaGAGACACCCCAGCCTCCAC +
Preference number: 2 (lower is better)
Translates to: PPEPICSGPFLTLERRRTAGLTS*RHPSLH
Trigger: GTGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGC...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGGCACTGTGCTGGCCTGACTTCGTaGAGACACCCCAGCCTCCAC +
Preference number: 2 (lower is better)
Translates to: QRDGGFQREFASHLSGHCAGLTS*RHPSLH
Trigger: GTGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGC...ACAGTGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp ACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCCAGCAGCACAAATGGTGTaGTCACCACTGGAGAATGAG +
Preference number: 2 (lower is better)
Translates to: TGCGGGRWPDFVQTPQPPAAQMV*SPLENE
Trigger: CTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGC...TGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGCCCGGCGCAGGTGCCTaGGGTTCCGTCCTAAGGAAA +
Preference number: 2 (lower is better)
Translates to: GMRRWERQRGLFHLGPPEPGAGA*GSVLRK
Trigger: TTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGG...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCGACGCCCGGCGCAGGTaGCTGCGGTTCCGTCCTAAG +
Preference number: 2 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIDARRR*LRFRPK
Trigger: CTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTC...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGGTGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: DLDWRTSLGITALWTQAGCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...CCCAGCCTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 2 (lower is better)
Translates to: PEPICSGPFLTLERRRTRGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 2 (lower is better)
Translates to: AGACGSVLRKSGRISWEGGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGAAAGGGAGGCGGAGGTaGCGCCGAGCTCGCGTACAG +
Preference number: 2 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAEKGRRR*RRARVQ
Trigger: CTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTT...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGACCATGGCCAGGTCCATaGACAGTGGAACCGCACTGG +
Preference number: 2 (lower is better)
Translates to: LKMLAERVQGLCESNGPRPWPGP*TVEPHW
Trigger: CCAGTGCGGTTCCACTGTCCATGGACCTGGCCATGG...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636509.2
3UTR-3UTR TCA 90 bp GGTCCTGCTCCACTCGGCAGAGTTTGTCTACGGTGCCTTGGTAATGCTTCATACCAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: GPAPLGRVCLRCLGNASYQTQRN*GGRWWE
Trigger: TTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTG...GTATGAAGCATTACCAAGGCACCGTAGACAAACTCTGCCGAGTGGAGCAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR TCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSRRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 2 (lower is better)
Translates to: LKMLAERVQGLCESNGPRDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAAGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 2 (lower is better)
Translates to: RREHHNAASREGGEQALKDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...TTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 2 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGADESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp ACGCCCGGCGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTCCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: TPGAGACGSVLRKSGRISPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GGGCACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACAGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: GHCDLDWRTSLGITALWTALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: AIALCSGASRTHLFWSIPALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AAGGAAAGCCAGACTGGAGCCCCCTGGACACCGGGAAGGGGTGCTGATTTCTTTGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: KESQTGAPWTPGRGADFFALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...AAAGAAATCAGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCAATGAGCTGTTGGGATaGTGCCTGGGGACAGAAGGG +
Preference number: 2 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSNELLG*CLGTEG
Trigger: CCCTTCTGTCCCCAGGCATCATCCCAACAGCTCATT...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGCTCTTTCTGGTACTaGGGCATCTTCTTCAGCATC +
Preference number: 2 (lower is better)
Translates to: QALKGRRRWRRARVQHFESSFWY*GIFFSI
Trigger: GATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCT...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR GCA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCGCGGTGGTGGGAAGCTaGGGAGCGCTGTGGGATGGG +
Preference number: 2 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVAVVGS*GALWDG
Trigger: CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGC...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGTCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 2 (lower is better)
Translates to: AKELRRAVVGSCGALWDGSRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGGGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: DLDWRTSLGITALWTQAGGGMRR*ERQRGL
Trigger: CAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCC...CCCAGCCTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTC
58% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCATGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGACGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTTGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: AIALCSGASRTHLFWSIPCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGTGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 2 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CACAGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCAGGTCCATGGACAGTaGAACCGCACTGGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: HSCTTGGMRRWERQRGLFQVHGQ*NRTGSR
Trigger: TCTGGAGCCAGTGCGGTTCCACTGTCCATGGACCTG...GAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636509.2
3UTR-3UTR TCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: LKMLAERVQGLCESNGPRRRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 2 (lower is better)
Translates to: TDAKELRRAVVGSCGALWTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 2 (lower is better)
Translates to: AGACGSVLRKSGRISWEGDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGACCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: LKMLAERVQGLCESNGPRPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCACCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGAPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCCCACCTTGGACCTCCTaGGATATCCTGATTGTCACC +
Preference number: 2 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSPPWTS*DILIVT
Trigger: GGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGG...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: LRFRPKEIRSYKLGGRRGALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...TCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GGGAGCGTGCCTTGTCTGGGCCCTCCCCCATTGTTGGATCATCAGCTTTATAGGAGAGCTGCTGAGTCTTaGGGATGGCGAGACAGCCTT +
Preference number: 2 (lower is better)
Translates to: GSVPCLGPPPLLDHQLYRRAAES*GWRDSL
Trigger: AAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCT...CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR TCA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTC +
Preference number: 2 (lower is better)
Translates to: GMRRWERQRGLFHLGPPENRSPP*ELVGLL
Trigger: GAGCAGACCTACCAGCTCTCACGGTGGACTCCGATT...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR GCA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGTCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 2 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKSRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCGCCTCCACCCACAGCTaGACTACCGGGGGTATGAGA +
Preference number: 2 (lower is better)
Translates to: RRWERQRGLFHLGPPEISASTHS*TTGGMR
Trigger: TCTCATACCCCCGGTAGTGCAGCTGTGGGTGGAGGC...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp AGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAACTTCCAGCGGGAGTTTaGTTCTCACCTGTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: RREHHNAASREGGEQALKLPAGV*FSPVRA
Trigger: TGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAG...TTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGG +
Preference number: 2 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGGRDLL*QALQYR
Trigger: CCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACC...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp CCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCACAGCACTGTGACTTAGACTaGAGGACTTCCCTCGGGATC +
Preference number: 2 (lower is better)
Translates to: PRGYRVCVSPTGQEPSPQHCDLD*RTSLGI
Trigger: GATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG...CTGTGGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCCAGCAGCAGCACAAATaGTGTGCTCACCACTGGAGA +
Preference number: 2 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSQQQHK*CAHHWR
Trigger: TCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTG...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGAAAGGGAGGCGGAGGTaGCGCCGAGCTCGCGTACAG +
Preference number: 2 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQKGRRR*RRARVQ
Trigger: CTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTT...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGTCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 2 (lower is better)
Translates to: KALRREHHNAASREGGEQSARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR TCA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 2 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGCCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: GMRRWERQRGLFHLGPPEPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GGGCACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACCACCTTGGACCTCCTaGGATATCCTGATTGTCACC +
Preference number: 2 (lower is better)
Translates to: GHCDLDWRTSLGITALWTPPWTS*DILIVT
Trigger: GGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGG...TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: RRWERQRGLFHLGPPEISALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGA +
Preference number: 2 (lower is better)
Translates to: PPEPICSGPFLTLERRRTVLVHS*PLNEGG
Trigger: TCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAAC...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGAGAGCTGCTGAGTCTTaGGGATGGCGAGACAGCCTT +
Preference number: 2 (lower is better)
Translates to: PEPICSGPFLTLERRRTRRAAES*GWRDSL
Trigger: AAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCT...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTGAGAATGAGAGCTGCTaGGTCTTGAGGATGGCGAGA +
Preference number: 2 (lower is better)
Translates to: AIALCSGASRTHLFWSIPENESC*VLRMAR
Trigger: TCTCGCCATCCTCAAGACTCAGCAGCTCTCATTCTC...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 2 (lower is better)
Translates to: SLEKRTPQCSEQRGRGAGSRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...GCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp ACGCCCGGCGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTAGACGGGGAGAGATCTaGCGACTAATCTCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: TPGAGACGSVLRKSGRISRRGEI*RLISVQ
Trigger: TTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCT...ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp ACGCCCGGCGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTGCAGTTTCTGTGGGGTaGGGATGTGTGTGGATCTTT +
Preference number: 2 (lower is better)
Translates to: TPGAGACGSVLRKSGRISAVSVG*GCVWIF
Trigger: AAAGATCCACACACATCCTCACCCCACAGAAACTGC...ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
3UTR-3UTR TCA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGTTGTCCTGGATTAGCTaGGCCAGCAGGGCATTGTCC +
Preference number: 2 (lower is better)
Translates to: GMRRWERQRGLFHLGPPELSWIS*ASRALS
Trigger: GGACAATGCCCTGCTGGCTCAGCTAATCCAGGACAA...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR TCA 90 bp AGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCAGCTCTTTCTGGTACTaGGGCATCTTCTTCAGCATC +
Preference number: 2 (lower is better)
Translates to: SLEKRTPQCSEQRGRGAGSSFWY*GIFFSI
Trigger: GATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCT...GCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR GCA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTAGCGGTGGTGGGAAGCTaGGGAGCGCTGTGGGATGGG +
Preference number: 2 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVAVVGS*GALWDG
Trigger: CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGC...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCACAGCATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 2 (lower is better)
Translates to: PRGYRVCVSPTGQEPSPQHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...CTGTGGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp TCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAAATGAGCTGTTGGCCTCCACCCACAGCTaGACTACCGGGGGTATGAGA +
Preference number: 2 (lower is better)
Translates to: SGPFLTLERRRTRENELLASTHS*TTGGMR
Trigger: TCTCATACCCCCGGTAGTGCAGCTGTGGGTGGAGGC...CAACAGCTCATTTTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGCTTCCAGCGGGAGTTTaGTTCTCACCTGTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: GMRRWERQRGLFHLGPPELPAGV*FSPVRA
Trigger: TGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAG...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCCAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: FSVSSSFCGVRMCVDPISQRVAI*SARRSS
Trigger: ACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTG...GCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR GCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGCACCTCCTTCACCCGTaGCTCCCCGATGCCGCTGGT +
Preference number: 2 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLHLLHP*LPDAAG
Trigger: ACCAGCGGCATCGGGGAGGCACGGGTGAAGGAGGTG...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR GCA 90 bp CAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATCGCTTAGGGAGTGGCTaGCCTCCGCATTCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: QMYLITRKLRLGSGCPPHRLGSG*PPHSFW
Trigger: CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCG...ATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR GCA 90 bp CAGGCTTCAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCCGCTTAGGGAGTGGCTaGCCTCCGCATTCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: QASDVPNHKKTALREWLPRLGSG*PPHSFW
Trigger: CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCG...GGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTGAAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR CCA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCCAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 2 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTCACTGTGACTTAGACTaGAGGACTTCCCTCGGGATC +
Preference number: 2 (lower is better)
Translates to: AIALCSGASRTHLFWSIPHCDLD*RTSLGI
Trigger: GATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCCACTGTGACTTAGACTaGAGGACTTCCCTCGGGATC +
Preference number: 2 (lower is better)
Translates to: MLAERVQGLCESNGPRTFHCDLD*RTSLGI
Trigger: GATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 2 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp AAGGAAAGCCAGACTGGAGCCCCCTGGACACCGGGAAGGGGTGCTGATTTCTTTGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 2 (lower is better)
Translates to: KESQTGAPWTPGRGADFFVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...AAAGAAATCAGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000637060.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 2 (lower is better)
Translates to: PEPICSGPFLTLERRRTRGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCGACCGGGTGACTTCCTaGGACACCTCTGCGATGTGC +
Preference number: 2 (lower is better)
Translates to: FSVSSSFCGVRMCVDPISDRVTS*DTSAMC
Trigger: GCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC...GCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR TCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 2 (lower is better)
Translates to: QALKGRRRWRRARVQHFECTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAAATGAGCTGTTGGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 2 (lower is better)
Translates to: SGPFLTLERRRTRENELLDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...CAACAGCTCATTTTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 2 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACCCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: QCVQQFLWGEDVCGSYQHPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...GTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR TCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCCCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: RRWERQRGLFHLGPPEISPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTCCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 2 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGCCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 2 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGGCACTGTCCACCTTGGACCTCCTaGGATATCCTGATTGTCACC +
Preference number: 2 (lower is better)
Translates to: QRDGGFQREFASHLSGHCPPWTS*DILIVT
Trigger: GGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGG...ACAGTGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRAALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAAATGAGCTGTTGGGATaGTGCCTGGGGACAGAAGGG +
Preference number: 2 (lower is better)
Translates to: EPICSGPFLTLERRRTRENELLG*CLGTEG
Trigger: CCCTTCTGTCCCCAGGCATCATCCCAACAGCTCATT...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGGTCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 2 (lower is better)
Translates to: DLDWRTSLGITALWTQAGSRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...CCCAGCCTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACCAAGGTCCTGAAGCATaGGCACTGTTTGGTCCGAGG +
Preference number: 2 (lower is better)
Translates to: QCVQQFLWGEDVCGSYQHQGPEA*ALFGPR
Trigger: CCTCGGACCAAACAGTGCTCATGCTTCAGGACCTTG...GTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR GCA 90 bp CAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATCTTAAATAACGGGGCGGTGGTGGGAAGCTaGGGAGCGCTGTGGGATGGG +
Preference number: 2 (lower is better)
Translates to: QCARHPGLCTRSQILNNGAVVGS*GALWDG
Trigger: CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGC...CCCGTTATTTAAGATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGCATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 2 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp AGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 2 (lower is better)
Translates to: SCTTGGMRRWERQRGLFHHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...GTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTCATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 2 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGCTGGCCTGACTTCGTaGAGACACCCCAGCCTCCAC +
Preference number: 2 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRAGLTS*RHPSLH
Trigger: GTGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGC...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp GGGAGGGAGACGGGGAGAGATCTGACGACTAATCTCAGTGCAAGGGGAGATTTCCTGACTGAAGATGCTTaGCGAGAGGGTACAGGGTCT +
Preference number: 2 (lower is better)
Translates to: GRETGRDLTTNLSARGDFLTEDA*REGTGS
Trigger: AGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAG...GAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACAATACACACATGGCCTaGAGGAGGTCAAGGGCGGCG +
Preference number: 2 (lower is better)
Translates to: LRKSGRISWEGDGERSDDNTHMA*RRSRAA
Trigger: CGCCGCCCTTGACCTCCTGCAGGCCATGTGTGTATT...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACAAGAGAACACCACAATaGAGCGAGCAGAGAGGGCGG +
Preference number: 2 (lower is better)
Translates to: QCVQQFLWGEDVCGSYQHKRTPQ*SEQRGR
Trigger: CCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTT...GTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: QCVQQFLWGEDVCGSYQHGGMRR*ERQRGL
Trigger: CAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCC...GTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCTGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: FSVSSSFCGVRMCVDPISCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...GCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp ACGCCCGGCGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTT +
Preference number: 2 (lower is better)
Translates to: TPGAGACGSVLRKSGRISVFPKR*RLPAGV
Trigger: AACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAAC...ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGTGTTGGGATGATGCCTaGGGACAGAAGGGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQCWDDA*GQKGLG
Trigger: GCCCAGGCCCTTCTGTCCCCAGGCATCATCCCAACA...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGATGGTGTGCTCACCACTaGAGAATGAGAGCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: LRFRPKEIRSYKLGGRRGWCAHH*RMRAAE
Trigger: CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCA...TCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGCAGCAGCAGCACAAATaGTGTGCTCACCACTGGAGA +
Preference number: 2 (lower is better)
Translates to: GMRRWERQRGLFHLGPPEQQQHK*CAHHWR
Trigger: TCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTG...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGACAAGTAATACACACATaGCCTGCAGGAGGTCAAGGG +
Preference number: 2 (lower is better)
Translates to: LKMLAERVQGLCESNGPRQVIHT*PAGGQG
Trigger: CCCTTGACCTCCTGCAGGCCATGTGTGTATTACTTG...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTAGCATGAGCACTGTTTaGTCCGAGGGAGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGSMSTV*SEGGDR
Trigger: TCTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCT...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACTCTGCGATGTGCTTGTaGCGCAGTGCTATCCACAGG +
Preference number: 2 (lower is better)
Translates to: QCVQQFLWGEDVCGSYQHSAMCL*RSAIHR
Trigger: CCTGTGGATAGCACTGCGCCACAAGCACATCGCAGA...GTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGGGGACAGGTCCCGCATaGTGGTCTTCTCTCCAGTAT +
Preference number: 2 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAEGTGPA*WSSLQY
Trigger: ATACTGGAGAGAAGACCACCATGCGGGACCTGTCCC...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR CAA 90 bp TTTCCACACATATCACCAATCTTATTTAGCACTGTGGATGCCGTTTaGCAAATGTCACCCACCATCAGCCCTCGCTCCGCTGCGGCCGCC +
Preference number: 2 (lower is better)
Translates to: FPHISPILFSTVDAV*QMSPTISPRSAAAA
Trigger: GGCGGCCGCAGCGGAGCGAGGGCTGATGGTGGGTGACATTTGCAAAACGGCATCCACAGTGCTAAATAAGATTGGTGATATGTGTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR-3UTR TCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 2 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTCCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 2 (lower is better)
Translates to: CTTGGMRRWERQRGLFHLPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...AAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCCCACCTTGGACCTCCTaGGATATCCTGATTGTCACC +
Preference number: 2 (lower is better)
Translates to: RRWERQRGLFHLGPPEISPPWTS*DILIVT
Trigger: GGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGG...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGGCTCTTACAAACACGATaGTGTATGACCCCACACAAC +
Preference number: 2 (lower is better)
Translates to: DLDWRTSLGITALWTQAGLLQTR*CMTPHN
Trigger: GTTGTGTGGGGTCATACATCATCGTGTTTGTAAGAG...CCCAGCCTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AAGGAAAGCCAGACTGGAGCCCCCTGGACACCGGGAAGGGGTGCTGATTTCTTTTCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 2 (lower is better)
Translates to: KESQTGAPWTPGRGADFFSRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...AAAGAAATCAGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGAGACGGGGAGAGATCTaGCGACTAATCTCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: PEPICSGPFLTLERRRTRRRGEI*RLISVQ
Trigger: TTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCT...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGCGACAAACAAGGTCCTaGAGCATGAGCACTGTTTGG +
Preference number: 2 (lower is better)
Translates to: PEPICSGPFLTLERRRTRRQTRS*SMSTVW
Trigger: CCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCG...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGCAGTTTCTGTGGGGTaGGGATGTGTGTGGATCTTT +
Preference number: 2 (lower is better)
Translates to: LRFRPKEIRSYKLGGRRGAVSVG*GCVWIF
Trigger: AAAGATCCACACACATCCTCACCCCACAGAAACTGC...TCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
3UTR-3UTR TCA 90 bp AGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCAGGTTTTCCTCCGTaGTGCCATTCTTCAAAAAGA +
Preference number: 2 (lower is better)
Translates to: SLEKRTPQCSEQRGRGAGSGFPP*CHSSKR
Trigger: TCTTTTTGAAGAATGGCATCACGGAGGAAAACCTGA...GCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR GCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTGCGGTGGTGGGAAGCTaGGGAGCGCTGTGGGATGGG +
Preference number: 2 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFAVVGS*GALWDG
Trigger: CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGC...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACCTTCCAGCGGGAGTTTaGTTCTCACCTGTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: LRKSGRISWEGDGERSDDLPAGV*FSPVRA
Trigger: TGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAG...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCGCGAGACAGCCTTCCTaGATTTGCTGCTTTAGTTTC +
Preference number: 2 (lower is better)
Translates to: MLAERVQGLCESNGPRTFARQPS*ICCFSF
Trigger: GAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGC...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGCAGCACAAATGGTGTaGTCACCACTGGAGAATGAG +
Preference number: 2 (lower is better)
Translates to: AGACGSVLRKSGRISWEGAAQMV*SPLENE
Trigger: CTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGC...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGCAGCACAAATGGTGTaGTCACCACTGGAGAATGAG +
Preference number: 2 (lower is better)
Translates to: LRFRPKEIRSYKLGGRRGAAQMV*SPLENE
Trigger: CTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGC...TCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGCTCCCTCAGCATCTGTaGCCATGGCCAGGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLLPQHL*PWPGPA
Trigger: AGCAGGACCTGGCCATGGGCACAGATGCTGAGGGAG...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp TTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATAGCTGCGGAGCGCTGTaGGATGGGGGCGTGTTTTGG +
Preference number: 2 (lower is better)
Translates to: FHTQAMCTSPRVMYKVTNSCGAL*DGGVFW
Trigger: CCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCT...ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGACAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 2 (lower is better)
Translates to: LRMARQPSCICCFSFCFRQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 2 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCTGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACCAGCAGCAGCACAAATaGTGTGCTCACCACTGGAGA +
Preference number: 2 (lower is better)
Translates to: QCVQQFLWGEDVCGSYQHQQQHK*CAHHWR
Trigger: TCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTG...GTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGACAAGTAATACACACATaGCCTGCAGGAGGTCAAGGG +
Preference number: 2 (lower is better)
Translates to: AGACGSVLRKSGRISWEGQVIHT*PAGGQG
Trigger: CCCTTGACCTCCTGCAGGCCATGTGTGTATTACTTG...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCCTAGACACTGCCAAGTaGTTTTCAAAGGGGCTACAC +
Preference number: 2 (lower is better)
Translates to: MLAERVQGLCESNGPRTFLDTAK*FSKGLH
Trigger: GTGTAGCCCCTTTGAAAACCACTTGGCAGTGTCTAG...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR CCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 2 (lower is better)
Translates to: FSVSSSFCGVRMCVDPISGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...GCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCTCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 2 (lower is better)
Translates to: FSVSSSFCGVRMCVDPISSARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...GCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR CAA 90 bp AGAGATCTGACGACTAATCTCAGTGCAAGGGGAGATTTCAAAGCCTaGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAG +
Preference number: 2 (lower is better)
Translates to: RDLTTNLSARGDFKA*RREHHNAASREGGE
Trigger: CTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTGAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp ACTTTCCGTTGGCCTGGGTCACCTCGTAGGCGCAGCGCATCTCATTCAGGCTCAACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 2 (lower is better)
Translates to: TFRWPGSPRRRSASHSGSTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...TGAGCCTGAATGAGATGCGCTGCGCCTACGAGGTGACCCAGGCCAACGGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR TCA 90 bp GACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGGACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 2 (lower is better)
Translates to: DLDWRTSLGITALWTQAGTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...CCCAGCCTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 2 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTCCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 2 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCCCACCTTGGACCTCCTaGGATATCCTGATTGTCACC +
Preference number: 2 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIPPWTS*DILIVT
Trigger: GGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGG...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp ACTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: TNCFSKEMEASSGSLLLTALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...GGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGA +
Preference number: 2 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQVLVHS*PLNEGG
Trigger: TCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAAC...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGAAACACGATGATGTATaGCCCCACACAACACAAGGT +
Preference number: 2 (lower is better)
Translates to: KALRREHHNAASREGGEQKHDDV*PHTTQG
Trigger: ACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTT...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGACTCTTACAAACACGATaGTGTATGACCCCACACAAC +
Preference number: 2 (lower is better)
Translates to: LKMLAERVQGLCESNGPRLLQTR*CMTPHN
Trigger: GTTGTGTGGGGTCATACATCATCGTGTTTGTAAGAG...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GGGAGGGAGACGGGGAGAGATCTGACGACTAATCTCAGTGCAAGGGGAGATTTCTCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 2 (lower is better)
Translates to: GRETGRDLTTNLSARGDFSRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...GAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCTCCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGATCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 2 (lower is better)
Translates to: LRFRPKEIRSYKLGGRRGSRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...TCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACAGAGTTGAGACAGCATaGTCTAGCAGGCCTTCCCGT +
Preference number: 2 (lower is better)
Translates to: LRKSGRISWEGDGERSDDRVETA*SSRPSR
Trigger: ACGGGAAGGCCTGCTAGATCATGCTGTCTCAACTCT...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636509.2
3UTR-3UTR GCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGCATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 2 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAEHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCCTGACTGAAGATGCTTaGCGAGAGGGTACAGGGTCT +
Preference number: 2 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEILTEDA*REGTGS
Trigger: AGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAG...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CTGATGAGAGAGTGGACGGACTTCTCGGATGGAGTGATGAGATACACAGCCTCCAACACAGCTGAGCTCTaGGGTCTGAACTCTGTGGAA +
Preference number: 2 (lower is better)
Translates to: LMREWTDFSDGVMRYTASNTAEL*GLNSVE
Trigger: TTCCACAGAGTTCAGACCGCAGAGCTCAGCTGTGTT...GGAGGCTGTGTATCTCATCACTCCATCCGAGAAGTCCGTCCACTCTCTCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR GCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCCCTTCCGCTCCGGCTTaGTCCGGCGACGCAGCGTGG +
Preference number: 2 (lower is better)
Translates to: RLVLSVKYSKNTDISMILPSAPA*SGDAAW
Trigger: CCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGG...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAAAGCTGCGGAGCGCTGTaGGATGGGGGCGTGTTTTGG +
Preference number: 2 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQSCGAL*DGGVFW
Trigger: CCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCT...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTTGGTGTGCTCACCACTaGAGAATGAGAGCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: SVLRKSGRISWEGDGERSWCAHH*RMRAAE
Trigger: CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCA...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGCAAGTAATACACACATaGCCTGCAGGAGGTCAAGGG +
Preference number: 2 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAEQVIHT*PAGGQG
Trigger: CCCTTGACCTCCTGCAGGCCATGTGTGTATTACTTG...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGTCACTGATGAGAGAGTaGACGGACTTCTCGGATGGA +
Preference number: 2 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAESLMRE*TDFSDG
Trigger: TCCATCCGAGAAGTCCGTCCACTCTCTCATCAGTGA...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR CCA 90 bp CTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGGTTTTCTCCCCAGGCTTaGCTTGGACTCATCGTCAAC +
Preference number: 2 (lower is better)
Translates to: LITRKLRLGSGCPPHSFWFSPQA*LGLIVN
Trigger: GTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAA...CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR CAA 90 bp AGGGAGTGGCTGCCCTCCGCATTCCTTCTGGGCGGCAGATGCAGTTaGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGT +
Preference number: 2 (lower is better)
Translates to: REWLPSAFLLGGRCS*SVCQHSAFMRTVCC
Trigger: ACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAGGAATGCGGAGGGCAGCCACTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR TCA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 2 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCCCACCTTGGACCTCCTaGGATATCCTGATTGTCACC +
Preference number: 2 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVPPWTS*DILIVT
Trigger: GGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGG...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGA +
Preference number: 2 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLVLVHS*PLNEGG
Trigger: TCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAAC...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGGTACAGGGTCTGTGTaGGTCCAACGGGCCAAGAAC +
Preference number: 2 (lower is better)
Translates to: LRMARQPSCICCFSFCFRGTGSV*VQRAKN
Trigger: GTTCTTGGCCCGTTGGACTCACACAGACCCTGTACC...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAG +
Preference number: 2 (lower is better)
Translates to: AGACGSVLRKSGRISWEGKLRII*LKMLAE
Trigger: CTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTT...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAAAACACGATGATGTATaGCCCCACACAACACAAGGT +
Preference number: 2 (lower is better)
Translates to: AGACGSVLRKSGRISWEGKHDDV*PHTTQG
Trigger: ACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTT...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCATCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 2 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGASRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCCATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 2 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGACTGGCTCACAGGACATaGATACCTTCAACTTTACTA +
Preference number: 2 (lower is better)
Translates to: LKMLAERVQGLCESNGPRLAHRT*IPSTLL
Trigger: TAGTAAAGTTGAAGGTATGCATGTCCTGTGAGCCAG...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR GCA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACTCCCTCAGCATCTGTaGCCATGGCCAGGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQLPQHL*PWPGPA
Trigger: AGCAGGACCTGGCCATGGGCACAGATGCTGAGGGAG...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp TCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAAGCTGCGGAGCGCTGTaGGATGGGGGCGTGTTTTGG +
Preference number: 2 (lower is better)
Translates to: SQILNNGEKASIHPNSPESCGAL*DGGVFW
Trigger: CCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCT...TTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTT +
Preference number: 2 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAEVFPKR*RLPAGV
Trigger: AACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAAC...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCCAAGTAATACACACATaGCCTGCAGGAGGTCAAGGG +
Preference number: 2 (lower is better)
Translates to: FSVSSSFCGVRMCVDPISQVIHT*PAGGQG
Trigger: CCCTTGACCTCCTGCAGGCCATGTGTGTATTACTTG...GCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTACAGGTCCCGCATGGTaGTCTTCTCTCCAGTATTCA +
Preference number: 2 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRATGPAW*SSLQYS
Trigger: TGAATACTGGAGAGAAGACCACCATGCGGGACCTGT...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CCA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGCAGCATCTGTGCCCATaGCCAGGTCCTGCTCCACTC +
Preference number: 2 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMQHLCP*PGPAPL
Trigger: GAGTGGAGCAGGACCTGGCCATGGGCACAGATGCTG...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR TCA 90 bp CGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACAAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: RPFILTVQKFLLLCTNCTRRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...TGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTCCACCTTGGACCTCCTaGGATATCCTGATTGTCACC +
Preference number: 2 (lower is better)
Translates to: LTVFPKRWRLPAGVCFSPPPWTS*DILIVT
Trigger: GGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGG...AGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp TCAATTCATGGAGCACAGGGGAGCTGGGGTCAAAGCCTCGATCCAGGATCAGGATCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 2 (lower is better)
Translates to: SIHGAQGSWGQSLDPGSGSRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...TCCTGATCCTGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCCATGAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR GCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCACCTTCCTGCATTTGCTaGTTTAGTTTCTGCTTTAGA +
Preference number: 2 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGAPSCIC*FSFCFR
Trigger: TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGG...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp GGGAGGGAGACGGGGAGAGATCTGACGACTAATCTCAGTGCAAGGGGAGATTTCCAGCCTTCCTGCATTTaGTGCTTTAGTTTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: GRETGRDLTTNLSARGDFQPSCI*CFSFCF
Trigger: AAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTG...GAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCTCCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp TGTATGACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATGACGCCCGGCGCAGGTaGCTGCGGTTCCGTCCTAAG +
Preference number: 2 (lower is better)
Translates to: CMTPHNTRYYEVSETEDNDARRR*LRFRPK
Trigger: CTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTC...ATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAATTAAACAGGGCATCTaGACAAGAGTCAGTGAAGAA +
Preference number: 2 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGAIKQGI*TRVSEE
Trigger: TTCTTCACTGACTCTTGTCCAGATGCCCTGTTTAAT...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR TCA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQRRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 2 (lower is better)
Translates to: CTTGGMRRWERQRGLFHLCTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...AAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGCCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAAAGAGCTGCTGAGTCTTaGGGATGGCGAGACAGCCTT +
Preference number: 2 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQRAAES*GWRDSL
Trigger: AAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCT...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGTCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 2 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAESRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGCACTCTGGTTTGAATTaGATTTCCCTGACCACTAAT +
Preference number: 2 (lower is better)
Translates to: GMRRWERQRGLFHLGPPEHSGLN*ISLTTN
Trigger: ATTAGTGGTCAGGGAAATGCAATTCAAACCAGAGTG...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR GCA 90 bp AATTTCTCCTGCTGTGCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGCTCCCTCAGCATCTGTaGCCATGGCCAGGTCCATGG +
Preference number: 2 (lower is better)
Translates to: NFSCCAPIAHELLFLGYMLPQHL*PWPGPW
Trigger: CCATGGACCTGGCCATGGGCACAGATGCTGAGGGAG...CATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCACAGCAGGAGAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636509.2
3UTR-3UTR CCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATACAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 2 (lower is better)
Translates to: DSLPAFAALVSALELSFIQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp TTGATATCTTCCACAACATGTGATCCAGCAATCCTGCTCCTTATTATTCACCAAGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: LISSTTCDPAILLLIIHQGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...TTGGTGAATAATAAGGAGCAGGATTGCTGGATCACATGTTGTGGAAGATATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR TCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 2 (lower is better)
Translates to: LRKSGRISWEGDGERSDDTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GAAGATAGCAGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 2 (lower is better)
Translates to: EDSRLVLSVKYSKNTDISDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...AGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCTGCTATCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTACAGCCCTTTGTATTTATCATCATCAATGGCTaGGCCCTCACTGTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LLLLSKSSSSELLQPFVFIIING*ALTVLP
Trigger: AGGAAGCACAGTGAGGGCTCAGCCATTGATGATGAT...AAATACAAAGGGCTGTAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR TCA 90 bp GCAATATGTGGTGCTTTTTATGAGGTTTTGAAGTGCCGTGGTTTGCCACGGTTAACTCCCTGCTTCTACTaGGCAAAAGCAGCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: AICGAFYEVLKCRGLPRLTPCFY*AKAAAL
Trigger: CAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGT...TAACCGTGGCAAACCACGGCACTTCAAAACCTCATAAAAAGCACCACATATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR GCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTTCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 2 (lower is better)
Translates to: SVLRKSGRISWEGDGERSSRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 2 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp ACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCTGACTGCCTCCACCCACAGCTaGACTACCGGGGGTATGAGA +
Preference number: 2 (lower is better)
Translates to: TPHNTRYYEVSETEDNLTASTHS*TTGGMR
Trigger: TCTCATACCCCCGGTAGTGCAGCTGTGGGTGGAGGC...AGTCAGATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACTGACTGAAGATGCTTaGCGAGAGGGTACAGGGTCT +
Preference number: 2 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQLTEDA*REGTGS
Trigger: AGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAG...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp CTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGCGAGACAGCCTTCCTaGATTTGCTGCTTTAGTTTC +
Preference number: 2 (lower is better)
Translates to: LTVFPKRWRLPAGVCFSPARQPS*ICCFSF
Trigger: GAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGC...AGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAATCAGCACCACAAAAGTaGCCTGGCTCCAGCTCACAT +
Preference number: 2 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQSAPQK*PGSSSH
Trigger: ATGTGAGCTGGAGCCAGGGCACTTTTGTGGTGCTGA...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR CCA 90 bp AGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGTGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: SVKYSKNTDISMILNKDRCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...CCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp AGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTT +
Preference number: 2 (lower is better)
Translates to: RMARQPSCICCFSFCFRAVFPKR*RLPAGV
Trigger: AACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAAC...AGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGTCCCCAGGCTTGGCTTaGACTCATCGTCAACAGCAG +
Preference number: 2 (lower is better)
Translates to: RQMQFVSLPTFCIYENSLSPGLA*THRQQQ
Trigger: CTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGA...CAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR CCA 90 bp GCCAGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACACCTCCGCATTCCTTCTaGGCGGCAGATGCAGTTTGT +
Preference number: 2 (lower is better)
Translates to: ASHYPDFGICHSHACFHTPPHSF*AADAVC
Trigger: ACAAACTGCATCTGCCGCCCAGAAGGAATGCGGAGG...TGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR TCA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 2 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRACTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTCCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: LCTRSQILNNGEKASIHPPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CACCGGGAAGGGGTGCTGATTTCTTTATTTATTAGACTCAAGTGCTTTAGTACAAATGAGCTGTTGGGATaGTGCCTGGGGACAGAAGGG +
Preference number: 2 (lower is better)
Translates to: HREGVLISLFIRLKCFSTNELLG*CLGTEG
Trigger: CCCTTCTGTCCCCAGGCATCATCCCAACAGCTCATT...TGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGA +
Preference number: 2 (lower is better)
Translates to: LCTRSQILNNGEKASIHPVLVHS*PLNEGG
Trigger: TCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAAC...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGA +
Preference number: 2 (lower is better)
Translates to: SVKYSKNTDISMILNKDRVLVHS*PLNEGG
Trigger: TCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAAC...CCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAG +
Preference number: 2 (lower is better)
Translates to: RMARQPSCICCFSFCFRAKLRII*LKMLAE
Trigger: CTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTT...AGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAACACGATGATGTATaGCCCCACACAACACAAGGT +
Preference number: 2 (lower is better)
Translates to: RMARQPSCICCFSFCFRAKHDDV*PHTTQG
Trigger: ACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTT...AGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGCGACAAACAAGGTCCTaGAGCATGAGCACTGTTTGG +
Preference number: 2 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMRQTRS*SMSTVW
Trigger: CCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCG...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTGCAGTTTCTGTGGGGTaGGGATGTGTGTGGATCCTT +
Preference number: 2 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFAVSVG*GCVWIL
Trigger: AAGGATCCACACACATCCTCACCCCACAGAAACTGC...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637953.1
3UTR-3UTR GCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTCCTTCCTGCATTTGCTaGTTTAGTTTCTGCTTTAGA +
Preference number: 2 (lower is better)
Translates to: SVLRKSGRISWEGDGERSPSCIC*FSFCFR
Trigger: TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGG...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp AGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTG +
Preference number: 2 (lower is better)
Translates to: SVKYSKNTDISMILNKDRGGMRR*ERQRGL
Trigger: CAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCC...CCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp CAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTCCCCAGGCTTGGCTTaGACTCATCGTCAACAGCAG +
Preference number: 2 (lower is better)
Translates to: QMQFVSLPTFCIYENSLLSPGLA*THRQQQ
Trigger: CTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGA...CAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR CAA 90 bp CAGTATAGGATTCTTCATCTGAGCCTTGTGGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTCCAAGGAATAGACCTGGGATTCATA +
Preference number: 2 (lower is better)
Translates to: QYRILHLSLVGTVEA*ERVSRVQGIDLGFI
Trigger: TATGAATCCCAGGTCTATTCCTTGGACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCCCACAAGGCTCAGATGAAGAATCCTATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR TCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 2 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATACCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: DSLPAFAALVSALELSFIPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAATGAGCTGTTGGGATaGTGCCTGGGGACAGAAGGG +
Preference number: 2 (lower is better)
Translates to: RLVLSVKYSKNTDISMILNELLG*CLGTEG
Trigger: CCCTTCTGTCCCCAGGCATCATCCCAACAGCTCATT...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp ATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAG +
Preference number: 2 (lower is better)
Translates to: MARQPSCICCFSFCFRAKKLRII*LKMLAE
Trigger: CTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTT...CTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGACTCTTACAAACACGATaGTGTATGACCCCACACAAC +
Preference number: 2 (lower is better)
Translates to: LRMARQPSCICCFSFCFRLLQTR*CMTPHN
Trigger: GTTGTGTGGGGTCATACATCATCGTGTTTGTAAGAG...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGTCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 2 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMSRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGAGTATCATCATCAATGGCTaGGCCCTCACTGTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: CIYENSLLFTHVASRILSIIING*ALTVLP
Trigger: AGGAAGCACAGTGAGGGCTCAGCCATTGATGATGAT...ACTCAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR TCA 90 bp GCCAGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACACAAAAGCAGCAGCTCTaGGCTTCTACAGCCCTTTGT +
Preference number: 2 (lower is better)
Translates to: ASHYPDFGICHSHACFHTQKQQL*ASTALC
Trigger: ACAAAGGGCTGTAGAAGCTCAGAGCTGCTGCTTTTG...TGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR GCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCTTCTATTGGGTGGGCTaGCTTTTCTTTCTTGATTTA +
Preference number: 2 (lower is better)
Translates to: FSVSSSFCGVRMCVDPISFYWVG*LFFLDL
Trigger: TAAATCAAGAAAGAAAAGGCAGCCCACCCAATAGAA...GCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR GCA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAACTTTACTAGACACTaGCAAGTGGTTTTCAAAGGG +
Preference number: 2 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVNFTRH*QVVFKG
Trigger: CCCTTTGAAAACCACTTGGCAGTGTCTAGTAAAGTT...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR CCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 2 (lower is better)
Translates to: KNTDISMILNKDRNNPKQVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373302.8
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp AATTTCTCCTGCTGTGCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 2 (lower is better)
Translates to: NFSCCAPIAHELLFLGYMVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...CATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCACAGCAGGAGAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373302.8
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 2 (lower is better)
Translates to: RRPFILTVQKFLLLCTNCCTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...GCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GAAGATAGCAGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTCCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 2 (lower is better)
Translates to: EDSRLVLSVKYSKNTDISPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...AGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCTGCTATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp ACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTTCATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 2 (lower is better)
Translates to: TDISMILNKDRNNPKQGFHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...AAAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCCTGACTGAAGATGCTTaGCGAGAGGGTACAGGGTCT +
Preference number: 2 (lower is better)
Translates to: RLVLSVKYSKNTDISMILLTEDA*REGTGS
Trigger: AGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAG...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 2 (lower is better)
Translates to: RLVLSVKYSKNTDISMILVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373302.8
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 2 (lower is better)
Translates to: FHTQAMCTSPRVMYKVTNCTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATACCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 2 (lower is better)
Translates to: DSLPAFAALVSALELSFIPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp TTGATATCTTCCACAACATGTGATCCAGCAATCCTGCTCCTTATTATTCACCAACCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 2 (lower is better)
Translates to: LISSTTCDPAILLLIIHQPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...TTGGTGAATAATAAGGAGCAGGATTGCTGGATCACATGTTGTGGAAGATATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR GCA 90 bp TTTTCCACTTGGGGAACCTATGAGCAACACTGCACATGTATTCCTGCACATGTATCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 2 (lower is better)
Translates to: FSTWGTYEQHCTCIPAHVSRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...TACATGTGCAGGAATACATGTGCAGTGTTGCTCATAGGTTCCCCAAGTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR GCA 90 bp CGCATTCCTTCTGGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTAGTTTGCCAACATTCTaGATTTATGAGAACAGTTTG +
Preference number: 2 (lower is better)
Translates to: RIPSGRQMQFVSLPTFCISLPTF*IYENSL
Trigger: CAAACTGTTCTCATAAATGCAGAATGTTGGCAAACT...AATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAGGAATGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR CAA 90 bp TACGGGAGAAATGCAATATTGATTTCCGTCAGAGTTTTGATGACTTaGGCTGCTCGGGATTTTACCAGTTCATTAAACAGGGCATCTGGA +
Preference number: 2 (lower is better)
Translates to: YGRNAILISVRVLMT*AARDFTSSLNRASG
Trigger: TCCAGATGCCCTGTTTAATGAACTGGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAATCAATATTGCATTTCTCCCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR TCA 90 bp CAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATCTTAAATAACGGGTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 2 (lower is better)
Translates to: QCARHPGLCTRSQILNNGCTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...CCCGTTATTTAAGATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCGCGAGACAGCCTTCCTaGATTTGCTGCTTTAGTTTC +
Preference number: 2 (lower is better)
Translates to: RLVLSVKYSKNTDISMILARQPS*ICCFSF
Trigger: GAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGC...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CCA 90 bp TTGATATCTTCCACAACATGTGATCCAGCAATCCTGCTCCTTATTATTCACCAAGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTT +
Preference number: 2 (lower is better)
Translates to: LISSTTCDPAILLLIIHQVFPKR*RLPAGV
Trigger: AACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAAC...TTGGTGAATAATAAGGAGCAGGATTGCTGGATCACATGTTGTGGAAGATATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR CCA 90 bp TGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTATTTTCTCCCCAGGCTTaGCTTGGACTCATCGTCAAC +
Preference number: 2 (lower is better)
Translates to: CSLSVCQHSAFMRTVCCLFSPQA*LGLIVN
Trigger: GTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAA...TAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR CAA 90 bp TGGGATTCATACGGGAGAAATGCAATATTGATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGGGATTTTACCAGTTCATTAAACAGG +
Preference number: 2 (lower is better)
Translates to: WDSYGRNAILISVRV*MTLAARDFTSSLNR
Trigger: CCTGTTTAATGAACTGGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAATCAATATTGCATTTCTCCCGTATGAATCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR TCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 2 (lower is better)
Translates to: VKYSKNTDISMILNKDRNTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATAAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAG +
Preference number: 2 (lower is better)
Translates to: DSLPAFAALVSALELSFIKLRII*LKMLAE
Trigger: CTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTT...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR TCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAAACACGATGATGTATaGCCCCACACAACACAAGGT +
Preference number: 2 (lower is better)
Translates to: RLVLSVKYSKNTDISMILKHDDV*PHTTQG
Trigger: ACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTT...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp GTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGTCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 2 (lower is better)
Translates to: VLSVKYSKNTDISMILNKSRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...CTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTACCTATGAGCAACACTaGACATGTATTCCTGCACAT +
Preference number: 2 (lower is better)
Translates to: LCTRSQILNNGEKASIHPTYEQH*TCIPAH
Trigger: ATGTGCAGGAATACATGTGCAGTGTTGCTCATAGGT...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR TCA 90 bp TTGGTCAGCTGCTTAATTGATCACAGGTTCACATTATTGCTAACAGGCTTCAGAGAGATCTATTCATGTTaGCATATGCAACTGTGTGTC +
Preference number: 2 (lower is better)
Translates to: LVSCLIDHRFTLLLTGFREIYSC*HMQLCV
Trigger: GACACACAGTTGCATATGTCAACATGAATAGATCTC...TCTGAAGCCTGTTAGCAATAATGTGAACCTGTGATCAATTAAGCAGCTGACCAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
3UTR-3UTR GCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATACAGCCTTCCTGCATTTaGTGCTTTAGTTTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: DSLPAFAALVSALELSFIQPSCI*CFSFCF
Trigger: AAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTG...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR GCA 90 bp TGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGAGTTGCAGTTTGTCAGTTTaGCAACATTCTGCATTTATG +
Preference number: 2 (lower is better)
Translates to: CIYENSLLFTHVASRILSCSLSV*QHSAFM
Trigger: CATAAATGCAGAATGTTGGCAAACTGACAAACTGCA...ACTCAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR CCA 90 bp GTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGCTCCTCACCGTCACTTaGCATTATCAGAGATTAAAT +
Preference number: 2 (lower is better)
Translates to: VLSVKYSKNTDISMILNKLLTVT*HYQRLN
Trigger: ATTTAATCTCTGATAATGCCAAGTGACGGTGAGGAG...CTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR GCA 90 bp TTGGTCAGCTGCTTAATTGATCACAGGTTCACATTATTGCTAACAGGCTTCAGAGAAGCTTTATATAAATaGACTATCCTGTCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: LVSCLIDHRFTLLLTGFREALYK*TILSVS
Trigger: GGACACAGACAGGATAGTGCATTTATATAAAGCTTC...TCTGAAGCCTGTTAGCAATAATGTGAACCTGTGATCAATTAAGCAGCTGACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
3UTR-3UTR TCA 90 bp AGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTAAACTCACCATTGGGTaGATACACAGTTTATCTGTT +
Preference number: 2 (lower is better)
Translates to: RCSLSVCQHSAFMRTVCCKLTIG*IHSLSV
Trigger: AACAGATAAACTGTGTATTCACCCAATGGTGAGTTT...ACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
3UTR-3UTR GCA 90 bp AGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACATTTAGTTTGCCAACATTCTaGATTTATGAGAACAGTTTG +
Preference number: 2 (lower is better)
Translates to: SHYPDFGICHSHACFHTFSLPTF*IYENSL
Trigger: CAAACTGTTCTCATAAATGCAGAATGTTGGCAAACT...AAATGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR GCA 72 bp GGCCACGGCAGGGCAGAGCCCCGCAACCAGGGAGATTaGAGACTGCGGCGCTGGGCGGCGGACACCGAAGCT +
Preference number: 3 (lower is better)
Translates to: GHGRAEPRNQGD*RLRRWAADTEA
Trigger: AGCTTCGGTGTCCGCCGCCCAGCGCCGCAGTCTGCAATCTCCCTGGTTGCGGGGCTCTGCCCTGCCGTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR GCA 72 bp GCAGGGCAGAGCCCCGCAACCAGGGAGATTGCAGACTaGGGCGCTGGGCGGCGGACACCGAAGCTCTCCTCA +
Preference number: 3 (lower is better)
Translates to: AGQSPATREIAD*GAGRRTPKLSS
Trigger: TGAGGAGAGCTTCGGTGTCCGCCGCCCAGCGCCGCAGTCTGCAATCTCCCTGGTTGCGGGGCTCTGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR TCA 72 bp CGTGCAGGGCTGGGGAGGCAACAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGT +
Preference number: 3 (lower is better)
Translates to: RAGLGRQQTQRN*GGRWWEAAERC
Trigger: ACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR CCA 72 bp GAGCCCCGCAACCAGGGAGATTGCAGACTGCGGCGCTaGGCGGCGGACACCGAAGCTCTCCTCATCTCCCGA +
Preference number: 3 (lower is better)
Translates to: EPRNQGDCRLRR*AADTEALLISR
Trigger: TCGGGAGATGAGGAGAGCTTCGGTGTCCGCCGCCCAGCGCCGCAGTCTGCAATCTCCCTGGTTGCGGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR TCA 72 bp TCGGAGTCCACCGTGAGAGCTGGTAGGTCTGCTCGCTaGTGCGTTCCTTCCGCTCCGGCTTGCTCCGGCGAC +
Preference number: 3 (lower is better)
Translates to: SESTVRAGRSAR*CVPSAPACSGD
Trigger: GTCGCCGGAGCAAGCCGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACCAGCTCTCACGGTGGACTCCGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR TCA 72 bp CCCATAAACAACCATTTCCTCCCTGCCACCGTGGTCTaGGCTCCCGAAGCGTTCGGCCACGGCAGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: PINNHFLPATVV*APEAFGHGRAE
Trigger: CTCTGCCCTGCCGTGGCCGAACGCTTCGGGAGCTCAGACCACGGTGGCAGGGAGGAAATGGTTGTTTATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR CCA 72 bp GAGCTGGGGTCAAAGCCTCGATCCAGGATCAGGAGCTaGGAGCGTGCCTTGTCTGGGCCCTCCCCCATTGTT +
Preference number: 3 (lower is better)
Translates to: ELGSKPRSRIRS*ERALSGPSPIV
Trigger: AACAATGGGGGAGGGCCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGATCGAGGCTTTGACCCCAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR GCA 72 bp AGAGACCGGGTGACTTCCTGGGACACCTCTGCGATGTaGTTGTGGCGCAGTGCTATCCACAGGTCGTCGTCC +
Preference number: 3 (lower is better)
Translates to: RDRVTSWDTSAM*LWRSAIHRSSS
Trigger: GGACGACGACCTGTGGATAGCACTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR CCA 72 bp AAGGCGGCTACAGATCTAACGCAAGCAACGGGGACCTaGGTCCAGAAGACTCCATGCCACAGCCGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: KAATDLTQATGT*VQKTPCHSRRW
Trigger: CCACCTCCGGCTGTGGCATGGAGTCTTCTGGACCCAGGTCCCCGTTGCTTGCGTTAGATCTGTAGCCGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637173.2
3UTR-3UTR CAA 90 bp CATGCCACAGCCGGAGGTGGTCGCCTCCTCTGCGATGAACCACTGCAAAAGCTTGCTTCCAGCGGGAGTTaGCTTCTCACCTGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: HATAGGGRLLCDEPLQKLASSGS*LLTCQG
Trigger: GCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGC...AAGCTTTTGCAGTGGTTCATCGCAGAGGAGGCGACCACCTCCGGCTGTGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637173.2
3UTR-3UTR CAA 90 bp AGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTACTCGCCTGGGGCCTaGTTCTTATGCCAGTGCCCA +
Preference number: 3 (lower is better)
Translates to: SLEKRTPQCSEQRGRGAGYSPGA*FLCQCP
Trigger: TGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTA...GCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR TCA 72 bp CCATGCCACAGCCGGAGGTGGTCGCCTCCTCTGCGATaGACCACTGCAAAAGCTTTCTCCTTCCGTTGCCCA +
Preference number: 3 (lower is better)
Translates to: PCHSRRWSPPLR*TTAKAFSFRCP
Trigger: TGGGCAACGGAAGGAGAAAGCTTTTGCAGTGGTTCATCGCAGAGGAGGCGACCACCTCCGGCTGTGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637173.2
3UTR-3UTR CAA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTGCTTCCAGCGGGAGTTaGCTTCTCACCTGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: AIALCSGASRTHLFWSIPASSGS*LLTCQG
Trigger: GCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGC...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAGCTTCCAGCGGGAGTTaGCTTCTCACCTGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: LKMLAERVQGLCESNGPRASSGS*LLTCQG
Trigger: GCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGC...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp GACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGGATCAGGTCGTATAAGTaGGGAGGGAGACGGGGAGAG +
Preference number: 3 (lower is better)
Translates to: DLDWRTSLGITALWTQAGIRSYK*GGRRGE
Trigger: CTCTCCCCGTCTCCCTCCCAACTTATACGACCTGAT...CCCAGCCTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 72 bp CCAGCGGGAGTTTGCTTCTCACCTGTCAGGGCACTGTaGCTTAGACTGGAGGACTTCCCTCGGGATCACAGC +
Preference number: 3 (lower is better)
Translates to: PAGVCFSPVRAL*LRLEDFPRDHS
Trigger: GCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCCTGACAGGTGAGAAGCAAACTCCCGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR GCA 72 bp ACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTaGGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGT +
Preference number: 3 (lower is better)
Translates to: TSSGSKTPGAGA*GSVLRKSGRIS
Trigger: ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR GCA 72 bp TTTGCAAATGTCACCCACCATCAGCCCTCGCTCCGCTaGGGCCGCCACTCGCCGCCACCCACTTTTAAAAAT +
Preference number: 3 (lower is better)
Translates to: FANVTHHQPSLR*GRHSPPPTFKN
Trigger: ATTTTTAAAAGTGGGTGGCGGCGAGTGGCGGCCGCAGCGGAGCGAGGGCTGATGGTGGGTGACATTTGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR CCA 72 bp TCCACCCACAGCTGCACTACCGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCT +
Preference number: 3 (lower is better)
Translates to: STHSCTTGGMRR*ERQRGLFHLGP
Trigger: AGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTGGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGTACTCGCCTGGGGCCTaGTTCTTATGCCAGTGCCCA +
Preference number: 3 (lower is better)
Translates to: GMRRWERQRGLFHLGPPEYSPGA*FLCQCP
Trigger: TGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTA...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR GCA 72 bp CTCCTTCAGGGTGGCACAAAGGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGGATTCTTCATCTGAGC +
Preference number: 3 (lower is better)
Translates to: LLQGGTKGRDLL*QALQYRILHLS
Trigger: GCTCAGATGAAGAATCCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTGTGCCACCCTGAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR GCA 72 bp GGGTACTCCTTCAGGGTGGCACAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGTATAGGATTCTTCATC +
Preference number: 3 (lower is better)
Translates to: GYSFRVAQRVAI*SARRSSIGFFI
Trigger: GATGAAGAATCCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR GCA 72 bp CAGCCGGAGGTGGTCGCCTCCTCTGCGATGAACCACTaGAAAAGCTTTCTCCTTCCGTTGCCCAAAGGAAAG +
Preference number: 3 (lower is better)
Translates to: QPEVVASSAMNH*KSFLLPLPKGK
Trigger: CTTTCCTTTGGGCAACGGAAGGAGAAAGCTTTTGCAGTGGTTCATCGCAGAGGAGGCGACCACCTCCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637173.2
3UTR GCA 72 bp AGACTCCATGCCACAGCCGGAGGTGGTCGCCTCCTCTaGGATGAACCACTGCAAAAGCTTTCTCCTTCCGTT +
Preference number: 3 (lower is better)
Translates to: RLHATAGGGRLL*DEPLQKLSPSV
Trigger: AACGGAAGGAGAAAGCTTTTGCAGTGGTTCATCGCAGAGGAGGCGACCACCTCCGGCTGTGGCATGGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637173.2
3UTR CCA 72 bp CTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTaGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATT +
Preference number: 3 (lower is better)
Translates to: LRLGSGCPPHSF*AADAVCQFANI
Trigger: AATGTTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR CAA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAGAGGTCTGTTCCACCTaGGACCTCCTGAGATATCCT +
Preference number: 3 (lower is better)
Translates to: LKMLAERVQGLCESNGPREVCST*DLLRYP
Trigger: AGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp CACAGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCGAGGTCTGTTCCACCTaGGACCTCCTGAGATATCCT +
Preference number: 3 (lower is better)
Translates to: HSCTTGGMRRWERQRGLFEVCST*DLLRYP
Trigger: AGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC...GAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACAAGCATGAGCACTGTTaGGTCCGAGGGAGGGGACAG +
Preference number: 3 (lower is better)
Translates to: QCVQQFLWGEDVCGSYQHKHEHC*VRGRGQ
Trigger: CTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCTT...GTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR TCA 72 bp AGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGACTAGGGAAAATGAGC +
Preference number: 3 (lower is better)
Translates to: RGLQNPSVLVHS*PLNEGGLGKMS
Trigger: GCTCATTTTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 72 bp ACTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTaGGTCCAACGGGCCAAGAACCTTCTCCACAGCCAT +
Preference number: 3 (lower is better)
Translates to: TEDACREGTGSV*VQRAKNLLHSH
Trigger: ATGGCTGTGGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 72 bp GAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTaGGAGGACATCACTAGACAAGTAATACACACATGG +
Preference number: 3 (lower is better)
Translates to: EAEVAPSSRTAL*EDITRQVIHTW
Trigger: CCATGTGTGTATTACTTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 72 bp AGGTGGGTGGAGTACTTGCTGAGCTCTTTCTGGTACTaGGGCATCTTCTTCAGCATCTGGGACAGGTCCCGC +
Preference number: 3 (lower is better)
Translates to: RWVEYLLSSFWY*GIFFSIWDRSR
Trigger: GCGGGACCTGTCCCAGATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCTCAGCAAGTACTCCACCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR TCA 72 bp GGTCGGGGGAAGAAGAAGAGGACTCCCTGCTTCTACTaGGCAAAAGCAGCAGCTCTGAGCTTCTACAGCCCT +
Preference number: 3 (lower is better)
Translates to: GRGKKKRTPCFY*AKAAALSFYSP
Trigger: AGGGCTGTAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTCTTCCCCCGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR GCA 72 bp CCTTTCATCCAAACCCATAAACAACCATTTCCTCCCTaGCACCGTGGTCTGAGCTCCCGAAGCGTTCGGCCA +
Preference number: 3 (lower is better)
Translates to: PFIQTHKQPFPP*HRGLSSRSVRP
Trigger: TGGCCGAACGCTTCGGGAGCTCAGACCACGGTGGCAGGGAGGAAATGGTTGTTTATGGGTTTGGATGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR GCA 72 bp CGTCCAGGAGCACCTCCTTCACCCGTGCCTCCCCGATaGCGCTGGTCTCATACTTGTATACATCATTTTCGA +
Preference number: 3 (lower is better)
Translates to: RPGAPPSPVPPR*RWSHTCIHHFR
Trigger: TCGAAAATGATGTATACAAGTATGAGACCAGCGGCATCGGGGAGGCACGGGTGAAGGAGGTGCTCCTGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR CCA 72 bp GATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTaGCTGCCCTCCGCATTCCTTCTGGGCGGCAGATGC +
Preference number: 3 (lower is better)
Translates to: DVPNHKKTALRE*LPSAFLLGGRC
Trigger: GCATCTGCCGCCCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR CAA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGATCAGGTCGTATAAGTaGGGAGGGAGACGGGGAGAG +
Preference number: 3 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAEIRSYK*GGRRGE
Trigger: CTCTCCCCGTCTCCCTCCCAACTTATACGACCTGAT...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 72 bp TGTGCTCACCACTGGAGAATGAGAGCTGCTGAGTCTTaGGGATGGCGAGACAGCCTTCCTGCATTTGCTGCT +
Preference number: 3 (lower is better)
Translates to: CAHHWRMRAAES*GWRDSLPAFAA
Trigger: AGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCTCATTCTCCAGTGGTGAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 72 bp GGGCACACATACCTGAGGTTGTCTAGGACACACACCTaGCCACAGACTTGCTGGCTCACAGGACATGCATAC +
Preference number: 3 (lower is better)
Translates to: GHTYLRLSRTHT*PQTCWLTGHAY
Trigger: GTATGCATGTCCTGTGAGCCAGCAAGTCTGTGGTCAGGTGTGTGTCCTAGACAACCTCAGGTATGTGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR TCA 72 bp GTCCTCCATGATGTCCTTGATAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTCGCTGATGCGTTCCTT +
Preference number: 3 (lower is better)
Translates to: VLHDVLDNRSPP*ELVGLLADAFL
Trigger: AAGGAACGCATCAGCGAGCAGACCTACCAGCTCTCACGGTGGACTCCGATTATCAAGGACATCATGGAGGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR GCA 72 bp CAGGGCATCTGGACAAGAGTCAGTGAAGAAGACGTGTaGAGCCCGGTATTTAGCAGTCGGCGGGTCCTTAAA +
Preference number: 3 (lower is better)
Translates to: QGIWTRVSEEDV*SPVFSSRRVLK
Trigger: TTTAAGGACCCGCCGACTGCTAAATACCGGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAGATGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR GCA 72 bp CCAGGTCCTGCTCCACTCGGCAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATACAGTCCTCAGCAAGGT +
Preference number: 3 (lower is better)
Translates to: PGPAPLGRVCLR*LGNASYSPQQG
Trigger: ACCTTGCTGAGGACTGTATGAAGCATTACCAAGGCACCGTAGACAAACTCTGCCGAGTGGAGCAGGACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR GCA 72 bp TACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTaGCCTCCGCATTCCTTCTGGGCGGCAGATGCAGTT +
Preference number: 3 (lower is better)
Translates to: YLITRKLRLGSG*PPHSFWAADAV
Trigger: AACTGCATCTGCCGCCCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR CCA 72 bp TTTGCTTCTCACCTGTCAGGGCACTGTGACTTAGACTaGAGGACTTCCCTCGGGATCACAGCACTGTGGACA +
Preference number: 3 (lower is better)
Translates to: FASHLSGHCDLD*RTSLGITALWT
Trigger: TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCCTGACAGGTGAGAAGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAGAGGTCTGTTCCACCTaGGACCTCCTGAGATATCCT +
Preference number: 3 (lower is better)
Translates to: EPICSGPFLTLERRRTREEVCST*DLLRYP
Trigger: AGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp GACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGGTTTGTCTACGGTGCCTaGGTAATGCTTCATACAGTC +
Preference number: 3 (lower is better)
Translates to: DLDWRTSLGITALWTQAGFVYGA*VMLHTV
Trigger: GACTGTATGAAGCATTACCAAGGCACCGTAGACAAA...CCCAGCCTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR TCA 72 bp CAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTaGGTCTTGAGGATGGCGAGACAGCCTTCCTGCATT +
Preference number: 3 (lower is better)
Translates to: QMVCSPLENESC*VLRMARQPSCI
Trigger: AATGCAGGAAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR GCA 72 bp GTGTCTTGCTGTCTTTGCTCACCGTTGTTCATCAGATaGATTCATGTTACTGTGAGCGCTCAGGGCTCGCCC +
Preference number: 3 (lower is better)
Translates to: VSCCLCSPLFIR*IHVTVSAQGSP
Trigger: GGGCGAGCCCTGAGCGCTCACAGTAACATGAATGCATCTGATGAACAACGGTGAGCAAAGACAGCAAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR GCA 72 bp GTGATGATCTCACTATCCTCCGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGGTTTTCCTCCGTGATG +
Preference number: 3 (lower is better)
Translates to: VMISLSSGGIWA*WISLFRFSSVM
Trigger: CATCACGGAGGAAAACCTGAACAAACTGATCCAGCACGCCCAGATACCCCCGGAGGATAGTGAGATCATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR GCA 72 bp GAGTGGCTGCCCTCCGCATTCCTTCTGGGCGGCAGATaGAGTTTGTCAGTTTGCCAACATTCTGCATTTATG +
Preference number: 3 (lower is better)
Translates to: EWLPSAFLLGGR*SLSVCQHSAFM
Trigger: CATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAGGAATGCGGAGGGCAGCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR CCA 72 bp GCCACAGGCTCCAGACTAACTGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTC +
Preference number: 3 (lower is better)
Translates to: ATGSRLTVFPKR*RLPAGVCFSPV
Trigger: GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGTCTGGAGCCTGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR CCA 72 bp TTCCGTTGCCCAAAGGAAAGCCAGACTGGAGCCCCCTaGACACCGGGAAGGGGTGCTGATTTCTTTATTTAT +
Preference number: 3 (lower is better)
Translates to: FRCPKESQTGAP*TPGRGADFFIY
Trigger: ATAAATAAAGAAATCAGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTTTGGGCAACGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637173.2
ENST00000650920.1
3UTR-3UTR CAA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTTCCAGCGGGAGTTaGCTTCTCACCTGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: LRMARQPSCICCFSFCFRASSGS*LLTCQG
Trigger: GCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGC...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp AAGGAAAGCCAGACTGGAGCCCCCTGGACACCGGGAAGGGGTGCTGATTTCTTTCCTCCTCACCGTCACTaGGCATTATCAGAGATTAAA +
Preference number: 3 (lower is better)
Translates to: KESQTGAPWTPGRGADFFPPHRH*ALSEIK
Trigger: TTTAATCTCTGATAATGCCAAGTGACGGTGAGGAGG...AAAGAAATCAGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR CAA 90 bp GGGAGCGTGCCTTGTCTGGGCCCTCCCCCATTGTTGGATCATCAGCTTTATAGGGGCTCTCTGCGCTTATaGATATCTTCCACAACATGT +
Preference number: 3 (lower is better)
Translates to: GSVPCLGPPPLLDHQLYRGSLRL*ISSTTC
Trigger: ACATGTTGTGGAAGATATCAATAAGCGCAGAGAGCC...CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR CAA 90 bp CTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGGGGCGGCAGATGCAGTTaGTCAGTTTGCCAACATTCT +
Preference number: 3 (lower is better)
Translates to: LITRKLRLGSGCPPHSFWGGRCS*SVCQHS
Trigger: AGAATGTTGGCAAACTGACAAACTGCATCTGCCGCC...CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR CAA 90 bp CCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGGGATGGGGGCGTGTTTaGGAGGGGCGACTTATTTTT +
Preference number: 3 (lower is better)
Translates to: PKFLPFHTQAMCTSPRVMGWGRV*EGRLIF
Trigger: AAAAATAAGTCGCCCCTCCAAAACACGCCCCCATCC...CATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGTTTGTCTACGGTGCCTaGGTAATGCTTCATACAGTC +
Preference number: 3 (lower is better)
Translates to: GMRRWERQRGLFHLGPPEFVYGA*VMLHTV
Trigger: GACTGTATGAAGCATTACCAAGGCACCGTAGACAAA...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR TCA 72 bp AGAAAGGGAAACCAACATCTTCGACAAACAAGGTCCTaGAGCATGAGCACTGTTTGGTCCGAGGGAGGGGAC +
Preference number: 3 (lower is better)
Translates to: RKGNQHLRQTRS*SMSTVWSEGGD
Trigger: GTCCCCTCCCTCGGACCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCGAAGATGTTGGTTTCCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp ATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGGGATGGGGGCGTGTTTaGGAGGGGCGACTTATTTTT +
Preference number: 3 (lower is better)
Translates to: ITGRRRPFILTVQKFLLLGWGRV*EGRLIF
Trigger: AAAAATAAGTCGCCCCTCCAAAACACGCCCCCATCC...CAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp AGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTGGATGGGGGCGTGTTTaGGAGGGGCGACTTATTTTT +
Preference number: 3 (lower is better)
Translates to: RMARQPSCICCFSFCFRAGWGRV*EGRLIF
Trigger: AAAAATAAGTCGCCCCTCCAAAACACGCCCCCATCC...AGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACCACTTGATGGACGTTTaGGTTATTTTCCACTTGGGG +
Preference number: 3 (lower is better)
Translates to: QCVQQFLWGEDVCGSYQHHLMDV*VIFHLG
Trigger: CCCCAAGTGGAAAATAACCAAAACGTCCATCAAGTG...GTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR TCA 72 bp GGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTaGGATATCCTGATTGTCACCTCCCAGGTTATTTGG +
Preference number: 3 (lower is better)
Translates to: GKAKRSVPPWTS*DILIVTSQVIW
Trigger: CCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 72 bp CGACTAATCTCAGTGCAAGGGGAGATTTCAAAGCCTTaGGAAGAGAACACCACAATGCAGCGAGCAGAGAGG +
Preference number: 3 (lower is better)
Translates to: RLISVQGEISKP*EENTTMQRAER
Trigger: CCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTGAAATCTCCCCTTGCACTGAGATTAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 72 bp AGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTaGCGACTAATCTCAGTGCAAGGGGAGATTTCAAAG +
Preference number: 3 (lower is better)
Translates to: RSYKLGGRRGEI*RLISVQGEISK
Trigger: CTTTGAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 72 bp GAAACCAACATCTTCGACAAACAAGGTCCTGAAGCATaGGCACTGTTTGGTCCGAGGGAGGGGACAGAACAA +
Preference number: 3 (lower is better)
Translates to: ETNIFDKQGPEA*ALFGPREGTEQ
Trigger: TTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCGAAGATGTTGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 72 bp AACACAGCTGAGCTCTGCGGTCTGAACTCTGTGGAATaGAGGCTCACTATCAGTGGTCTTTCGTGTCTTGCT +
Preference number: 3 (lower is better)
Translates to: NTAELCGLNSVE*RLTISGLSCLA
Trigger: AGCAAGACACGAAAGACCACTGATAGTGAGCCTTCATTCCACAGAGTTCAGACCGCAGAGCTCAGCTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR GCA 72 bp ACACACCTGACCACAGACTTGCTGGCTCACAGGACATaGATACCTTCAACTTTACTAGACACTGCCAAGTGG +
Preference number: 3 (lower is better)
Translates to: THLTTDLLAHRT*IPSTLLDTAKW
Trigger: CCACTTGGCAGTGTCTAGTAAAGTTGAAGGTATGCATGTCCTGTGAGCCAGCAAGTCTGTGGTCAGGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR CCA 72 bp CGGTCTGAACTCTGTGGAATGAAGGCTCACTATCAGTaGTCTTTCGTGTCTTGCTGTCTTTGCTCACCGTTG +
Preference number: 3 (lower is better)
Translates to: RSELCGMKAHYQ*SFVSCCLCSPL
Trigger: CAACGGTGAGCAAAGACAGCAAGACACGAAAGACCACTGATAGTGAGCCTTCATTCCACAGAGTTCAGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR CAA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTGCTTCCAGCGGGAGTTaGCTTCTCACCTGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: LCTRSQILNNGEKASIHPASSGS*LLTCQG
Trigger: GCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGC...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp CCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGCACAGGTTCACATTATaGCTAACAGGCTTCAGATGT +
Preference number: 3 (lower is better)
Translates to: PNHKKTALREWLPSAFLLHRFTL*LTGFRC
Trigger: ACATCTGAAGCCTGTTAGCAATAATGTGAACCTGTG...CAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR TCA 72 bp CCAGACTGGAGCCCCCTGGACACCGGGAAGGGGTGCTaGTTTCTTTATTTATTAGACTCAAGTGCTTTAGTA +
Preference number: 3 (lower is better)
Translates to: PDWSPLDTGKGC*FLYLLDSSALV
Trigger: TACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 72 bp TTGCTGTTTACCCATGTAGCCTCCAGGATACTGAGTTaGTCACGACCCTCACTCTTTCAGCCTGCAACATTG +
Preference number: 3 (lower is better)
Translates to: LLFTHVASRILS*SRPSLFQPATL
Trigger: CAATGTTGCAGGCTGAAAGAGTGAGGGTCGTGATCAACTCAGTATCCTGGAGGCTACATGGGTAAACAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
3UTR GCA 72 bp CAGTTAAGAAACGAAACCCAATCAGCACCACAAAAGTaGCCTGGCTCCAGCTCACATTCCCCTCTATCAACA +
Preference number: 3 (lower is better)
Translates to: QLRNETQSAPQK*PGSSSHSPLST
Trigger: TGTTGATAGAGGGGAATGTGAGCTGGAGCCAGGGCACTTTTGTGGTGCTGATTGGGTTTCGTTTCTTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR CAA 90 bp CAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATCTTAAATAACGGGGGATGGGGGCGTGTTTaGGAGGGGCGACTTATTTTT +
Preference number: 3 (lower is better)
Translates to: QCARHPGLCTRSQILNNGGWGRV*EGRLIF
Trigger: AAAAATAAGTCGCCCCTCCAAAACACGCCCCCATCC...CCCGTTATTTAAGATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp CACCGGGAAGGGGTGCTGATTTCTTTATTTATTAGACTCAAGTGCTTTAGTACAACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCAC +
Preference number: 3 (lower is better)
Translates to: HREGVLISLFIRLKCFSTTSAMC*WRSAIH
Trigger: GTGGATAGCACTGCGCCACAAGCACATCGCAGAGGT...TGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CAA 90 bp TTGGTCAGCTGCTTAATTGATCACAGGTTCACATTATTGCTAACAGGCTTCAGACTCCCCAGGCTTGGCTaGGACTCATCGTCAACAGCA +
Preference number: 3 (lower is better)
Translates to: LVSCLIDHRFTLLLTGFRLPRLG*DSSSTA
Trigger: TGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAG...TCTGAAGCCTGTTAGCAATAATGTGAACCTGTGATCAATTAAGCAGCTGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR CAA 90 bp TTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGCTTTTCTCCCCAGGCTaGGCTTGGACTCATCGTCAA +
Preference number: 3 (lower is better)
Translates to: FCIYENSLLFTHVASRILLFSPG*AWTHRQ
Trigger: TTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAG...CAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR TCA 72 bp CTTTGTTTCTTTGGCTCTCACTCCATTGTTGGAGCCTaGTCCTCAAAAGATACCCTAGAGGACTCCCTGAAG +
Preference number: 3 (lower is better)
Translates to: LCFFGSHSIVGA*SSKDTLEDSLK
Trigger: CTTCAGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
3UTR GCA 72 bp TCACAGGACATGCATACCTTCAACTTTACTAGACACTaGCAAGTGGTTTTCAAAGGGGCTACACCAGCAGAC +
Preference number: 3 (lower is better)
Translates to: SQDMHTFNFTRH*QVVFKGATPAD
Trigger: GTCTGCTGGTGTAGCCCCTTTGAAAACCACTTGGCAGTGTCTAGTAAAGTTGAAGGTATGCATGTCCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR CCA 72 bp TTTATTCAGTTTCTTCAGTGTGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGATCCTATCAGCACCTC +
Preference number: 3 (lower is better)
Translates to: FIQFLQCVQQFL*GEDVCGSYQHL
Trigger: GAGGTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACTGAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
3UTR CCA 72 bp TTTATTCAGTTTCTTCAGTGTGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGATCCTTAGGAGGAAGC +
Preference number: 3 (lower is better)
Translates to: FIQFLQCVQQFL*GEDVCGSLGGS
Trigger: GCTTCCTCCTAAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACTGAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637953.1
3UTR-3UTR CAA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCATCAGGTCGTATAAGTaGGGAGGGAGACGGGGAGAG +
Preference number: 3 (lower is better)
Translates to: RLVLSVKYSKNTDISMILIRSYK*GGRRGE
Trigger: CTCTCCCCGTCTCCCTCCCAACTTATACGACCTGAT...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR-3UTR CAA 90 bp TGTATGACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCACCTGACCACAGACTaGCTGGCTCACAGGACATGC +
Preference number: 3 (lower is better)
Translates to: CMTPHNTRYYEVSETEDNHLTTD*LAHRTC
Trigger: GCATGTCCTGTGAGCCAGCAAGTCTGTGGTCAGGTG...ATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR CAA 90 bp TGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTACTCCCCAGGCTTGGCTaGGACTCATCGTCAACAGCA +
Preference number: 3 (lower is better)
Translates to: CSLSVCQHSAFMRTVCCLLPRLG*DSSSTA
Trigger: TGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAG...TAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR GCA 72 bp ACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTaGACGTCACCCAGGGTTATGTACAAGGTCACAAAT +
Preference number: 3 (lower is better)
Translates to: TPKFLPFHTQAM*TSPRVMYKVTN
Trigger: ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR GCA 72 bp GGAATGAAGGCTCACTATCAGTGGTCTTTCGTGTCTTaGTGTCTTTGCTCACCGTTGTTCATCAGATGCATT +
Preference number: 3 (lower is better)
Translates to: GMKAHYQWSFVS*CLCSPLFIRCI
Trigger: AATGCATCTGATGAACAACGGTGAGCAAAGACAGCAAGACACGAAAGACCACTGATAGTGAGCCTTCATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR CAA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATAGGATGGGGGCGTGTTTaGGAGGGGCGACTTATTTTT +
Preference number: 3 (lower is better)
Translates to: DSLPAFAALVSALELSFIGWGRV*EGRLIF
Trigger: AAAAATAAGTCGCCCCTCCAAAACACGCCCCCATCC...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 72 bp CAAGGTATTATGAAGTATCTGAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAGAGGGTACAGGGTCTG +
Preference number: 3 (lower is better)
Translates to: QGIMKYLKLRII*LKMLAERVQGL
Trigger: CAGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTTCAGATACTTCATAATACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 72 bp CCAAATAAGCAATATGTGGTGCTTTTTATGAGGTTTTaGAGTGCCGTGGTTTGCCACGGTTACTACGGGACT +
Preference number: 3 (lower is better)
Translates to: PNKQYVVLFMRF*SAVVCHGYYGT
Trigger: AGTCCCGTAGTAACCGTGGCAAACCACGGCACTTCAAAACCTCATAAAAAGCACCACATATTGCTTATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR GCA 72 bp GCTCACTATCAGTGGTCTTTCGTGTCTTGCTGTCTTTaGTCACCGTTGTTCATCAGATGCATTCATGTTACT +
Preference number: 3 (lower is better)
Translates to: AHYQWSFVSCCL*SPLFIRCIHVT
Trigger: AGTAACATGAATGCATCTGATGAACAACGGTGAGCAAAGACAGCAAGACACGAAAGACCACTGATAGTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR GCA 72 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTaGATTTATGAGAACAGTTTGCTGTTTACCCATGTA +
Preference number: 3 (lower is better)
Translates to: GRQMQFVSLPTF*IYENSLLFTHV
Trigger: TACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR CCA 72 bp ACATGCATACCTTCAACTTTACTAGACACTGCCAAGTaGTTTTCAAAGGGGCTACACCAGCAGACATTCCAT +
Preference number: 3 (lower is better)
Translates to: TCIPSTLLDTAK*FSKGLHQQTFH
Trigger: ATGGAATGTCTGCTGGTGTAGCCCCTTTGAAAACCACTTGGCAGTGTCTAGTAAAGTTGAAGGTATGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR TCA 72 bp AACCCTTCTTTTGGCATTCCTTTAACAGACATTGAATaGGCATCTAGCCCTGGATTTGGTGCTAGGGATTCA +
Preference number: 3 (lower is better)
Translates to: NPSFGIPLTDIE*ASSPGFGARDS
Trigger: TGAATCCCTAGCACCAAATCCAGGGCTAGATGCTCATTCAATGTCTGTTAAAGGAATGCCAAAAGAAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR TCA 72 bp CGGCTCTCTGCGCTTATTGATATCTTCCACAACATGTaGTCCAGCAATCCTGCTCCTTATTATTCACCAAAA +
Preference number: 3 (lower is better)
Translates to: RLSALIDIFHNM*SSNPAPYYSPK
Trigger: TTTTGGTGAATAATAAGGAGCAGGATTGCTGGATCACATGTTGTGGAAGATATCAATAAGCGCAGAGAGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR TCA 72 bp AGGGAAGAGGAGGTAATGATTGGTCAGCTGCTTAATTaGTCACAGGTTCACATTATTGCTAACAGGCTTCAG +
Preference number: 3 (lower is better)
Translates to: REEEVMIGQLLN*SQVHIIANRLQ
Trigger: CTGAAGCCTGTTAGCAATAATGTGAACCTGTGATCAATTAAGCAGCTGACCAATCATTACCTCCTCTTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR GCA 72 bp GTCTTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTaGTTTAGTTTCTGCTTTAGAGCTAAGTTTTATACA +
Preference number: 3 (lower is better)
Translates to: VLRMARQPSCIC*FSFCFRAKFYT
Trigger: TGTATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR CCA 72 bp TTTTTCCACACATATCACCAATCTTATTTAGCACTGTaGATGCCGTTTTGCAAATGTCACCCACCATCAGCC +
Preference number: 3 (lower is better)
Translates to: FFHTYHQSYLAL*MPFCKCHPPSA
Trigger: GGCTGATGGTGGGTGACATTTGCAAAACGGCATCCACAGTGCTAAATAAGATTGGTGATATGTGTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476182.3
3UTR-3UTR CAA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGATTTGGATTTCTTCTTTaGTTAAGTGCCTGCTCAGAA +
Preference number: 3 (lower is better)
Translates to: LRMARQPSCICCFSFCFRFGFLL*LSACSE
Trigger: TTCTGAGCAGGCACTTAACAAAAGAAGAAATCCAAA...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR CAA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 3 (lower is better)
Translates to: RLVLSVKYSKNTDISMILISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR-3UTR CAA 90 bp CTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTACAGCCCTTTGTATTTATGCAGTTTGTCAGTTaGCCAACATTCTGCATTTAT +
Preference number: 3 (lower is better)
Translates to: LLLLSKSSSSELLQPFVFMQFVS*PTFCIY
Trigger: ATAAATGCAGAATGTTGGCAAACTGACAAACTGCAT...AAATACAAAGGGCTGTAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR GCA 72 bp ACTCTTTCAGCCTGCAACATTGAAGCTTTATATAAATaGACTATCCTGTCTGTGTCCTCCCATAATGTGCTC +
Preference number: 3 (lower is better)
Translates to: TLSACNIEALYK*TILSVSSHNVL
Trigger: GAGCACATTATGGGAGGACACAGACAGGATAGTGCATTTATATAAAGCTTCAATGTTGCAGGCTGAAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
3UTR GCA 72 bp GATACTGAGTTGATCACGACCCTCACTCTTTCAGCCTaGAACATTGAAGCTTTATATAAATGCACTATCCTG +
Preference number: 3 (lower is better)
Translates to: DTELITTLTLSA*NIEALYKCTIL
Trigger: CAGGATAGTGCATTTATATAAAGCTTCAATGTTGCAGGCTGAAAGAGTGAGGGTCGTGATCAACTCAGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
3UTR-3UTR CAA 90 bp TGTATGACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATGCATCTCACTCTGGTTaGAATTGCATTTCCCTGACC +
Preference number: 3 (lower is better)
Translates to: CMTPHNTRYYEVSETEDNASHSG*NCISLT
Trigger: GGTCAGGGAAATGCAATTCAAACCAGAGTGAGATGC...ATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR-3UTR CAA 90 bp TTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCTTATCTGTTCTCTTCTaGATGAGCATTGGGCTTTTT +
Preference number: 3 (lower is better)
Translates to: LPTFCIYENSLLFTHVASLSVLF*MSIGLF
Trigger: AAAAAGCCCAATGCTCATCAAGAAGAGAACAGATAA...GGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR GCA 72 bp GTCCAAGGAATAGACCTGGGATTCATACGGGAGAAATaGAATATTGATTTCCGTCAGAGTTTTGATGACTTT +
Preference number: 3 (lower is better)
Translates to: VQGIDLGFIREK*NIDFRQSFDDF
Trigger: AAAGTCATCAAAACTCTGACGGAAATCAATATTGCATTTCTCCCGTATGAATCCCAGGTCTATTCCTTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR GCA 72 bp TTTGAATCTATATCGGCATCTCACTCTGGTTTGAATTaGATTTCCCTGACCACTAATGACAGTGGACAATTT +
Preference number: 3 (lower is better)
Translates to: FESISASHSGLN*ISLTTNDSGQF
Trigger: AAATTGTCCACTGTCATTAGTGGTCAGGGAAATGCAATTCAAACCAGAGTGAGATGCCGATATAGATTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR TCA 72 bp AAAATGACCATCTTCTCTTACAAACACGATGATGTATaGCCCCACACAACACAAGGTATTATGAAGTATCTG +
Preference number: 3 (lower is better)
Translates to: KMTIFSYKHDDV*PHTTQGIMKYL
Trigger: CAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTTGTAAGAGAAGATGGTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR TCA 72 bp AATGAAGTACTTTTAAGCCCGTGGCTCATTTGGAATTaGAGATATAAGACGACAATAATAACCATCCCTTCC +
Preference number: 3 (lower is better)
Translates to: NEVLLSPWLIWN*RYKTTIITIPS
Trigger: GGAAGGGATGGTTATTATTGTCGTCTTATATCTTCAATTCCAAATGAGCCACGGGCTTAAAAGTACTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR TCA 72 bp CCCATAATGTGCTCTTTTCACTCATTGTTAAGTGTCTaGGATCTATTCATGTTGACATATGCAACTGTGTGT +
Preference number: 3 (lower is better)
Translates to: PIMCSFHSLLSV*DLFMLTYATVC
Trigger: ACACACAGTTGCATATGTCAACATGAATAGATCTCAGACACTTAACAATGAGTGAAAAGAGCACATTATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636962.2
3UTR-3UTR CAA 90 bp TGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTATTATCTGTTCTCTTCTaGATGAGCATTGGGCTTTTT +
Preference number: 3 (lower is better)
Translates to: CSLSVCQHSAFMRTVCCLLSVLF*MSIGLF
Trigger: AAAAAGCCCAATGCTCATCAAGAAGAGAACAGATAA...TAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR-3UTR CAA 90 bp AGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACATTTATGCAGTTTGTCAGTTaGCCAACATTCTGCATTTAT +
Preference number: 3 (lower is better)
Translates to: SHYPDFGICHSHACFHTFMQFVS*PTFCIY
Trigger: ATAAATGCAGAATGTTGGCAAACTGACAAACTGCAT...AAATGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR CAA 72 bp CGGCCACGGCAGGGCAGAGCCCCGCAACCAGGGAGATaGCAGACTGCGGCGCTGGGCGGCGGACACCGAAGC +
Preference number: 4 (lower is better)
Translates to: RPRQGRAPQPGR*QTAALGGGHRS
Trigger: GCTTCGGTGTCCGCCGCCCAGCGCCGCAGTCTGCAATCTCCCTGGTTGCGGGGCTCTGCCCTGCCGTGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR GCA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGCCTTCCGCTCCGGCTTaGTCCGGCGACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVPSAPA*SGDAAW
Trigger: CCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGG...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTGGAGGGCCTTCCGCTCCGGCTTaGTCCGGCGACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: GRWWEAAERCGMGACFGGPSAPA*SGDAAW
Trigger: CCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGG...CCCTCCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTCCTTCCGCTCCGGCTTaGTCCGGCGACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFPSAPA*SGDAAW
Trigger: CCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGG...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ATTTCCTCCCTGCCACCGTGGTCTGAGCTCCCGAAGCGTTCGGCCACGGCAGGGTGGGGGCCATGGCGCTaGGCGAGTCTCCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ISSLPPWSELPKRSATAGWGPWR*ASLPAP
Trigger: CGGAGCCGGGAGACTCGCGCAGCGCCATGGCCCCCA...CCCTGCCGTGGCCGAACGCTTCGGGAGCTCAGACCACGGTGGCAGGGAGGAAAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR GCA 90 bp GGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTGGAGGGCAGGAGCTGGGAGCGTaGCTTGTCTGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GRWWEAAERCGMGACFGGQELGA*LVWALP
Trigger: GGGGAGGGCCCAGACAAGGCACGCTCCCAGCTCCTG...CCCTCCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTGACGCCCGGCGCAGGTaGCTGCGGTTCCGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFDARRR*LRFRPK
Trigger: CTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTC...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGGGTAGGTCTGCTCGCTaGTGCGTTCCTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVGRSAR*CVPSAP
Trigger: CGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACC...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTCACCTCCTTCACCCGTaGCTCCCCGATGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVHLLHP*LPDAAG
Trigger: ACCAGCGGCATCGGGGAGGCACGGGTGAAGGAGGTG...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGCCTTCCGCTCCGGCTTaGTCCGGCGACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: TDAKELRRAVVGSCGALWPSAPA*SGDAAW
Trigger: CCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGG...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGACGCCCGGCGCAGGTaGCTGCGGTTCCGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: AKELRRAVVGSCGALWDGDARRR*LRFRPK
Trigger: CTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTC...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAATGTCACCCACCATCAGCCCTCGCTCCGCTGCGGCCGCCACTCGCCGCCACCAGGGAGATTGCAGACTaGGGCGCTGGGCGGCGGACA +
Preference number: 4 (lower is better)
Translates to: KCHPPSALAPLRPPLAATREIAD*GAGRRT
Trigger: TGTCCGCCGCCCAGCGCCGCAGTCTGCAATCTCCCT...GGTGGCGGCGAGTGGCGGCCGCAGCGGAGCGAGGGCTGATGGTGGGTGACATTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR CCA 90 bp CCAGGGAGATTGCAGACTGCGGCGCTGGGCGGCGGACACCGAAGCTCTCCTCATGGCCAATGGGGGCCATaGCGCTGCGCGAGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: PGRLQTAALGGGHRSSPHGQWGP*RCASLP
Trigger: CGGGAGACTCGCGCAGCGCCATGGCCCCCATTGGCC...ATGAGGAGAGCTTCGGTGTCCGCCGCCCAGCGCCGCAGTCTGCAATCTCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR CCA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGGGAGCGTGCCTTGTCTaGGCCCTCCCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVGACLV*ALPHCW
Trigger: CCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCC...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCCTTCCGCTCCGGCTTaGTCCGGCGACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPPSAPA*SGDAAW
Trigger: CCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGG...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGGCGGTGGTGGGAAGCTaGGGAGCGCTGTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: EATDAKELRRAVVGSCGAAVVGS*GALWDG
Trigger: CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGC...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTAGCTGCGGAGCGCTGTaGGATGGGGGCGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVSCGAL*DGGVFW
Trigger: CCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCT...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 4 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCAGGGAGATTGCAGACTGCGGCGCTGGGCGGCGGACACCGAAGCTCTCCTCATTGCAGACTGCGGCGCTaGGCGGCGGACACCGAAGCT +
Preference number: 4 (lower is better)
Translates to: PGRLQTAALGGGHRSSPHCRLRR*AADTEA
Trigger: AGCTTCGGTGTCCGCCGCCCAGCGCCGCAGTCTGCA...ATGAGGAGAGCTTCGGTGTCCGCCGCCCAGCGCCGCAGTCTGCAATCTCCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR TCA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVNRSPP*ELVGLL
Trigger: GAGCAGACCTACCAGCTCTCACGGTGGACTCCGATT...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTGGAGGGCCCGTGCCTCCCCGATaGCGCTGGTCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: GRWWEAAERCGMGACFGGPVPPR*RWSHTC
Trigger: ACAAGTATGAGACCAGCGGCATCGGGGAGGCACGGG...CCCTCCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGGTGCTTGTGGCGCAGTaGTATCCACAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVVLVAQ*YPQVVV
Trigger: GACGACGACCTGTGGATAGCACTGCGCCACAAGCAC...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCCAGACGCCCGGCGCAGGTaGCTGCGGTTCCGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: TGCGGGRWPDFVQTPQPPDARRR*LRFRPK
Trigger: CTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTC...TGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTCCTCTTTCCCGTCGGTaGTGGGATCCCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGPLSRR*WDPWPQ
Trigger: CTGTGGCCAGGGATCCCAGCACCGACGGGAAAGAGG...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR CCA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTCCAGGATCAGGAGCTaGGAGCGTGCCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFSRIRS*ERALSG
Trigger: CCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGA...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTGACCGGGTGACTTCCTaGGACACCTCTGCGATGTGC +
Preference number: 4 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVDRVTS*DTSAMC
Trigger: GCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTCAGCATCTGTGCCCATaGCCAGGTCCTGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFQHLCP*PGPAPL
Trigger: GAGTGGAGCAGGACCTGGCCATGGGCACAGATGCTG...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGCAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 4 (lower is better)
Translates to: AKELRRAVVGSCGALWDGQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCGGTGCTGGGATCCCTaGCCACAGGCTACCGACGCG +
Preference number: 4 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPRCWDP*PQATDA
Trigger: CGCGTCGGTAGCCTGTGGCCAGGGATCCCAGCACCG...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR TCA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTGCAGCGTGGAATCGGTaGCGATGGGCACGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPAAWNR*RWARRG
Trigger: ACCTCGGCGTGCCCATCGTCACCGATTCCACGCTGC...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 4 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTGGAGGGGGTACAGGGTCTGTGTaGGTCCAACGGGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: GRWWEAAERCGMGACFGGGTGSV*VQRAKN
Trigger: GTTCTTGGCCCGTTGGACTCACACAGACCCTGTACC...CCCTCCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTGTGCTTGTGGCGCAGTaGTATCCACAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVVLVAQ*YPQVVV
Trigger: GACGACGACCTGTGGATAGCACTGCGCCACAAGCAC...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTGGAGGGTTCCTGGGACACCTCTaGGATGTGCTTGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: GRWWEAAERCGMGACFGGFLGHL*DVLVAQ
Trigger: CTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAA...CCCTCCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCCTTCCGCTCCGGCTTaGTCCGGCGACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: ALRREHHNAASREGGEQAPSAPA*SGDAAW
Trigger: CCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGG...AGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGCCTCCACCCACAGCTaGACTACCGGGGGTATGAGA +
Preference number: 4 (lower is better)
Translates to: AKELRRAVVGSCGALWDGASTHS*TTGGMR
Trigger: TCTCATACCCCCGGTAGTGCAGCTGTGGGTGGAGGC...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCCACCGACGCGCTCCATCTaGCTGAAACCCCGCTCGGGT +
Preference number: 4 (lower is better)
Translates to: TGCGGGRWPDFVQTPQPPPTRSI*LKPRSG
Trigger: ACCCGAGCGGGGTTTCAGGCAGATGGAGCGCGTCGG...TGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR GCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGCCTCTTTCCCGTCGGTaGTGGGATCCCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: TDAKELRRAVVGSCGALWPLSRR*WDPWPQ
Trigger: CTGTGGCCAGGGATCCCAGCACCGACGGGAAAGAGG...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR CCA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTCCTCCGGGGGTATCTaGGCGTGCTGGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFSSGGI*ACWISL
Trigger: CAAACTGATCCAGCACGCCCAGATACCCCCGGAGGA...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGAGCTGCGGAGCGCTGTaGGATGGGGGCGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TDAKELRRAVVGSCGALWSCGAL*DGGVFW
Trigger: CCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCT...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGAGCATGAGCACTGTTTaGTCCGAGGGAGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVSMSTV*SEGGDR
Trigger: TCTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCT...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTCCGACAACAGCTTTaGGGCCAATGGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: EATDAKELRRAVVGSCGALRQQL*GQWGPW
Trigger: CCATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAG...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTATGGGCACGCCGAGGTaGGCCATGTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGMGTPR*AMLVMI
Trigger: GATCATCACCAACATGGCTCACCTCGGCGTGCCCAT...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTAATGAGCTGTTGGGATaGTGCCTGGGGACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVNELLG*CLGTEG
Trigger: CCCTTCTGTCCCCAGGCATCATCCCAACAGCTCATT...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFVLVHS*PLNEGG
Trigger: TCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAAC...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKQRVAI*SARRSS
Trigger: ACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTG...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTCTTCCAGCGGGAGTTTaGTTCTCACCTGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVLPAGV*FSPVRA
Trigger: TGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAG...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTAAGAGAACACCACAATaGAGCGAGCAGAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVKRTPQ*SEQRGR
Trigger: CCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTT...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTCTGCGATGTGCTTGTaGCGCAGTGCTATCCACAGG +
Preference number: 4 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFSAMCL*RSAIHR
Trigger: CCTGTGGATAGCACTGCGCCACAAGCACATCGCAGA...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFSARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVSARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTGGAGGGGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GRWWEAAERCGMGACFGGGGMRR*ERQRGL
Trigger: CAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCC...CCCTCCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCC
64% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGCACTGTGACTTAGACTaGAGGACTTCCCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVHCDLD*RTSLGI
Trigger: GATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGATGGGCACGCCGAGGTaGGCCATGTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: EATDAKELRRAVVGSCGAMGTPR*AMLVMI
Trigger: GATCATCACCAACATGGCTCACCTCGGCGTGCCCAT...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: EATDAKELRRAVVGSCGAALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGAGAGCTGCTGAGTCTTaGGGATGGCGAGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: AKELRRAVVGSCGALWDGRAAES*GWRDSL
Trigger: AAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCT...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTCTGAGCTCTGCGGTCTaGACTCTGTGGAATGAAGGC +
Preference number: 4 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGLSSAV*TLWNEG
Trigger: GCCTTCATTCCACAGAGTTCAGACCGCAGAGCTCAG...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR GCA 90 bp AGCTCCTCACTTGGGGGACACACGGGAGGCCACTCCAGCAGACTGGTGCACTGCGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: SSSLGGHTGGHSSRLVHCGRDLL*QALQYR
Trigger: CCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACC...GCAGTGCACCAGTCTGCTGGAGTGGCCTCCCGTGTGTCCCCCAAGTGAGGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR GCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGCCCGTGCCTCCCCGATaGCGCTGGTCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: QALKGRRRWRRARVQHFEPVPPR*RWSHTC
Trigger: ACAAGTATGAGACCAGCGGCATCGGGGAGGCACGGG...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGTTCCTGGGACACCTCTaGGATGTGCTTGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: TDAKELRRAVVGSCGALWFLGHL*DVLVAQ
Trigger: CTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAA...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGCAGTCCTCAGCAAGGTaGAGGTGGGTGGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: AKELRRAVVGSCGALWDGQSSAR*RWVEYL
Trigger: CAAGTACTCCACCCACCTGCACCTTGCTGAGGACTG...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCTCCCTCAGCATCTGTaGCCATGGCCAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPLPQHL*PWPGPA
Trigger: AGCAGGACCTGGCCATGGGCACAGATGCTGAGGGAG...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCCAGCCTCCACCCACAGCTaGACTACCGGGGGTATGAGA +
Preference number: 4 (lower is better)
Translates to: TGCGGGRWPDFVQTPQPPASTHS*TTGGMR
Trigger: TCTCATACCCCCGGTAGTGCAGCTGTGGGTGGAGGC...TGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGAATACACACATGGCCTaGAGGAGGTCAAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: TDAKELRRAVVGSCGALWNTHMA*RRSRAA
Trigger: CGCCGCCCTTGACCTCCTGCAGGCCATGTGTGTATT...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACCCCGGCGCAGGTGCCTaGGGTTCCGTCCTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KGGGGGAELAYSTLRGHHPGAGA*GSVLRK
Trigger: TTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGG...GTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCGACGCCCGGCGCAGGTaGCTGCGGTTCCGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSDARRR*LRFRPK
Trigger: CTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTC...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGCTCAGGTGGGCGCGCTaGGCCAGCCGCAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: GMRRWERQRGLFHLGPPELRWAR*ASRSSP
Trigger: CGGAGAGCTGCGGCTGGCCCAGCGCGCCCACCTGAG...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
CDS-3UTR CCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGGCCAATGGGGGCCATaGCGCTGCGCGAGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: KALRREHHNAASREGGEQGQWGP*RCASLP
Trigger: CGGGAGACTCGCGCAGCGCCATGGCCCCCATTGGCC...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTCACTGATGAGAGAGTaGACGGACTTCTCGGATGGA +
Preference number: 4 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVSLMRE*TDFSDG
Trigger: TCCATCCGAGAAGTCCGTCCACTCTCTCATCAGTGA...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTGGAGCACAGGGGAGCTaGGGTCAAAGCCTCGATCCA +
Preference number: 4 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPGAQGS*GQSLDP
Trigger: TGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCC...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGTCTGCGATGTGCTTGTaGCGCAGTGCTATCCACAGG +
Preference number: 4 (lower is better)
Translates to: AKELRRAVVGSCGALWDGSAMCL*RSAIHR
Trigger: CCTGTGGATAGCACTGCGCCACAAGCACATCGCAGA...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGGACCGGGTGACTTCCTaGGACACCTCTGCGATGTGC +
Preference number: 4 (lower is better)
Translates to: QALKGRRRWRRARVQHFEDRVTS*DTSAMC
Trigger: GCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTACTGCGGTACTCGCCTaGGGCCTTGTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGTAVLA*GLVLMP
Trigger: TGGCATAAGAACAAGGCCCCAGGCGAGTACCGCAGT...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGCCTCCCACTTTCCGTTaGCCTGGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: QALKGRRRWRRARVQHFEPPTFR*PGSPRR
Trigger: CCTACGAGGTGACCCAGGCCAACGGAAAGTGGGAGG...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: KGGGGGAELAYSTLRGHHGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...GTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTGGTGTGCTCACCACTaGAGAATGAGAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVWCAHH*RMRAAE
Trigger: CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCA...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCAAAGGGAGGCGGAGGTaGCGCCGAGCTCGCGTACAG +
Preference number: 4 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPKGRRR*RRARVQ
Trigger: CTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTT...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTGGAGGGATCCTCATGCTTAACTaGTCCACCACCAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: GRWWEAAERCGMGACFGGILMLN*STTSTF
Trigger: GAAGGTGCTGGTGGTGGATCAGTTAAGCATGAGGAT...CCCTCCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTGGAGGGTTATGCCCTCGGTCATaGTGTCTGTCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GRWWEAAERCGMGACFGGLCPRS*CLSSCS
Trigger: GCTGCAAGATGACAGACATCATGACCGAGGGCATAA...CCCTCCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGCTTTCAGAGACCGGGTaGCTTCCTGGGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: QALKGRRRWRRARVQHFELSETG*LPGTPL
Trigger: CAGAGGTGTCCCAGGAAGTCACCCGGTCTCTGAAAG...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: EATDAKELRRAVVGSCGARRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGCCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: TDAKELRRAVVGSCGALWPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGAATGAGCTGTTGGGATaGTGCCTGGGGACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKNELLG*CLGTEG
Trigger: CCCTTCTGTCCCCAGGCATCATCCCAACAGCTCATT...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGCAAGGTCCTGAAGCATaGGCACTGTTTGGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: TDAKELRRAVVGSCGALWQGPEA*ALFGPR
Trigger: CCTCGGACCAAACAGTGCTCATGCTTCAGGACCTTG...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTCGACAAACAAGGTCCTaGAGCATGAGCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVRQTRS*SMSTVW
Trigger: CCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCG...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTAGAGTTGAGACAGCATaGTCTAGCAGGCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGRVETA*SSRPSR
Trigger: ACGGGAAGGCCTGCTAGATCATGCTGTCTCAACTCT...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636509.2
CDS-3UTR GCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCACAGGAGCTGGGAGCGTaGCTTGTCTGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGAQELGA*LVWALP
Trigger: GGGGAGGGCCCAGACAAGGCACGCTCCCAGCTCCTG...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GCACAAAGGGTCGCGATCTGCTCTGCCAGGCGCTCCAGTATAGGATTCTTCATCCCTTCCGCTCCGGCTTaGTCCGGCGACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: AQRVAICSARRSSIGFFIPSAPA*SGDAAW
Trigger: CCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGG...GATGAAGAATCCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR GCA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTGCGGTGGTGGGAAGCTaGGGAGCGCTGTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPAVVGS*GALWDG
Trigger: CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGC...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTGCGGTGGTGGGAAGCTaGGGAGCGCTGTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSAVVGS*GALWDG
Trigger: CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGC...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTGCAGCACAAATGGTGTaGTCACCACTGGAGAATGAG +
Preference number: 4 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFAAQMV*SPLENE
Trigger: CTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGC...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGAAGAGAACACCACAATaGAGCGAGCAGAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKKRTPQ*SEQRGR
Trigger: CCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTT...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GGGCACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACAGACGCCCGGCGCAGGTaGCTGCGGTTCCGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: GHCDLDWRTSLGITALWTDARRR*LRFRPK
Trigger: CTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTC...TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CCAGGCCAGCTCCTCACTTGGGGGACACACGGGAGGCCACTCCAGCAGACTGGTACTCCAGCAGACTGGTaGACTGCCTTACCCCCGATA +
Preference number: 4 (lower is better)
Translates to: PGQLLTWGTHGRPLQQTGTPADW*TALPPI
Trigger: TATCGGGGGTAAGGCAGTGCACCAGTCTGCTGGAGT...ACCAGTCTGCTGGAGTGGCCTCCCGTGTGTCCCCCAAGTGAGGAGCTGGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR CCA 90 bp CTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGGCTCAGGTGGGCGCGCTaGGCCAGCCGCAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: LITRKLRLGSGCPPHSFWLRWAR*ASRSSP
Trigger: CGGAGAGCTGCGGCTGGCCCAGCGCGCCCACCTGAG...CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp GGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTGGAGGGGACGGACTTCTCGGATaGAGTGATGAGATACACAGC +
Preference number: 4 (lower is better)
Translates to: GRWWEAAERCGMGACFGGDGLLG*SDEIHS
Trigger: GCTGTGTATCTCATCACTCCATCCGAGAAGTCCGTC...CCCTCCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACTCCAGGATCAGGAGCTaGGAGCGTGCCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: KGGGGGAELAYSTLRGHHSRIRS*ERALSG
Trigger: CCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGA...GTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCATCTGTGCCCATGGCCAGGTCCATGGACAGTGGAACCGCACTGGCTCCAGAGGGAGCACAGGGGAGCTaGGGTCAAAGCCTCGATCCA +
Preference number: 4 (lower is better)
Translates to: ASVPMARSMDSGTALAPEGAQGS*GQSLDP
Trigger: TGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCC...CTCTGGAGCCAGTGCGGTTCCACTGTCCATGGACCTGGCCATGGGCACAGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636509.2
CDS-3UTR CCA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTTCCTCCGGGGGTATCTaGGCGTGCTGGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPSSGGI*ACWISL
Trigger: CAAACTGATCCAGCACGCCCAGATACCCCCGGAGGA...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTAGCTGCGGAGCGCTGTaGGATGGGGGCGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: ALRREHHNAASREGGEQASCGAL*DGGVFW
Trigger: CCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCT...AGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCCAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 4 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCTGATGCGTTCCTTCCGCTCCGGCTTGCTCCGGCGACGCAGCGTGGAATCGGTGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ADAFLPLRLAPATQRGIGGGMRR*ERQRGL
Trigger: CAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCC...ACCGATTCCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGAACGCATCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR CCA 90 bp AGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLEKRTPQCSEQRGRGAGGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...GCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTT +
Preference number: 4 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVVFPKR*RLPAGV
Trigger: AACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAAC...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTCAAGTAATACACACATaGCCTGCAGGAGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVQVIHT*PAGGQG
Trigger: CCCTTGACCTCCTGCAGGCCATGTGTGTATTACTTG...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGAGCATGAGCACTGTTTaGTCCGAGGGAGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: EATDAKELRRAVVGSCGASMSTV*SEGGDR
Trigger: TCTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCT...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGAGCATGAGCACTGTTTaGTCCGAGGGAGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: TDAKELRRAVVGSCGALWSMSTV*SEGGDR
Trigger: TCTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCT...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GAGACAACTGTCAGAGGAACCTTAAGGCCGGAGGAGGAGTCCAGGCCAGCTCCTGGCCAGCTCCTCACTTaGGGGACACACGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ETTVRGTLRPEEESRPAPGQLLT*GTHGRP
Trigger: TGGCCTCCCGTGTGTCCCCCAAGTGAGGAGCTGGCC...AGGAGCTGGCCTGGACTCCTCCTCCGGCCTTAAGGTTCCTCTGACAGTTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR CCA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTCGGTGCTGGGATCCCTaGCCACAGGCTACCGACGCG +
Preference number: 4 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPRCWDP*PQATDA
Trigger: CGCGTCGGTAGCCTGTGGCCAGGGATCCCAGCACCG...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
3UTR CAA 72 bp GACCGGGTGACTTCCTGGGACACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCACAGGTCGTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: DRVTSWDTSAMC*WRSAIHRSSSS
Trigger: CGAGGACGACGACCTGTGGATAGCACTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGGGGTGGAGTACTTGCTaGGCTCTTTCTGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: EATDAKELRRAVVGSCGAGWSTC*ALSGTE
Trigger: CTCAGTACCAGAAAGAGCTCAGCAAGTACTCCACCC...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGGCAGCGTGGAATCGGTaGCGATGGGCACGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGAAWNR*RWARRG
Trigger: ACCTCGGCGTGCCCATCGTCACCGATTCCACGCTGC...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCCAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSQTQRN*GGRWWE
Trigger: TTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTG...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTCCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCCACCTTGGACCTCCTaGGATATCCTGATTGTCACC +
Preference number: 4 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKPPWTS*DILIVT
Trigger: GGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGG...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 4 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFSRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGCAAGGTCCTGAAGCATaGGCACTGTTTGGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: QALKGRRRWRRARVQHFEQGPEA*ALFGPR
Trigger: CCTCGGACCAAACAGTGCTCATGCTTCAGGACCTTG...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACGCGCTCCATCTGCCTaGAACCCCGCTCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TTGGMRRWERQRGLFHLGRAPSA*NPARVL
Trigger: CAGGACCCGAGCGGGGTTTCAGGCAGATGGAGCGCG...TCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR TCA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGGTCATGCACTGCTGGTaGGAATGTAAAATGGTACAG +
Preference number: 4 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVVMHCW*ECKMVQ
Trigger: CTGTACCATTTTACATTCTCACCAGCAGTGCATGAC...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637173.2
ENST00000650920.1
CDS-3UTR GCA 90 bp CTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGACAGGAGCTGGGAGCGTaGCTTGTCTGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LRFRPKEIRSYKLGGRRGQELGA*LVWALP
Trigger: GGGGAGGGCCCAGACAAGGCACGCTCCCAGCTCCTG...TCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCACACCTCCTTCACCCGTaGCTCCCCGATGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGAHLLHP*LPDAAG
Trigger: ACCAGCGGCATCGGGGAGGCACGGGTGAAGGAGGTG...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACTTCCTGGGACACCTCTaGGATGTGCTTGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: KGGGGGAELAYSTLRGHHFLGHL*DVLVAQ
Trigger: CTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAA...GTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCCTCCCTCAGCATCTGTaGCCATGGCCAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPLPQHL*PWPGPA
Trigger: AGCAGGACCTGGCCATGGGCACAGATGCTGAGGGAG...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QALKGRRRWRRARVQHFEGGIWA*WISLFR
Trigger: CCTGAACAAACTGATCCAGCACGCCCAGATACCCCC...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGCCTTCCGCTCCGGCTTaGTCCGGCGACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: PNHKKTALREWLPSAFLLPSAPA*SGDAAW
Trigger: CCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGG...CAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTGCGAGACAGCCTTCCTaGATTTGCTGCTTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVARQPS*ICCFSF
Trigger: GAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGC...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGCAGCACAAATGGTGTaGTCACCACTGGAGAATGAG +
Preference number: 4 (lower is better)
Translates to: AKELRRAVVGSCGALWDGAAQMV*SPLENE
Trigger: CTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGC...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGCCGACGCGCTCCATCTaGCTGAAACCCCGCTCGGGT +
Preference number: 4 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGPTRSI*LKPRSG
Trigger: ACCCGAGCGGGGTTTCAGGCAGATGGAGCGCGTCGG...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR CCA 90 bp GAGCAGGCACTGAGGGGTAGGGACTGGAATGAAGATAGCAGATTAGTCCTCAGTCTCAGGTGGGCGCGCTaGGCCAGCCGCAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: EQALRGRDWNEDSRLVLSLRWAR*ASRSSP
Trigger: CGGAGAGCTGCGGCTGGCCCAGCGCGCCCACCTGAG...ACTGAGGACTAATCTGCTATCTTCATTCCAGTCCCTACCCCTCAGTGCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
CDS-3UTR CCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGGGCCAATGGGGGCCATaGCGCTGCGCGAGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAEGQWGP*RCASLP
Trigger: CGGGAGACTCGCGCAGCGCCATGGCCCCCATTGGCC...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCGGAGCGTGCCTTGTCTaGGCCCTCCCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSGACLV*ALPHCW
Trigger: CCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCC...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTGGAGCACAGGGGAGCTaGGGTCAAAGCCTCGATCCA +
Preference number: 4 (lower is better)
Translates to: ALRREHHNAASREGGEQAGAQGS*GQSLDP
Trigger: TGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCC...AGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGTCTGCGATGTGCTTGTaGCGCAGTGCTATCCACAGG +
Preference number: 4 (lower is better)
Translates to: QALKGRRRWRRARVQHFESAMCL*RSAIHR
Trigger: CCTGTGGATAGCACTGCGCCACAAGCACATCGCAGA...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGATCTTCTTCAGCATCTaGGACAGGTCCCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKIFFSI*DRSRMV
Trigger: CACCATGCGGGACCTGTCCCAGATGCTGAAGAAGAT...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCCAGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TGCGGGRWPDFVQTPQPPGGMRR*ERQRGL
Trigger: CAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCC...TGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACTGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: KGGGGGAELAYSTLRGHHCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...GTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CATGCCACAGCCGGAGGTGGTCGCCTCCTCTGCGATGAACCACTGCAAAAGCTTGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HATAGGGRLLCDEPLQKLGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...AAGCTTTTGCAGTGGTTCATCGCAGAGGAGGCGACCACCTCCGGCTGTGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637173.2
CDS-3UTR CCA 90 bp ACGCCCGGCGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 4 (lower is better)
Translates to: TPGAGACGSVLRKSGRISGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTTGTTGGGATGATGCCTaGGGACAGAAGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ALRREHHNAASREGGEQACWDDA*GQKGLG
Trigger: GCCCAGGCCCTTCTGTCCCCAGGCATCATCCCAACA...AGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGTGGTGTGCTCACCACTaGAGAATGAGAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TDAKELRRAVVGSCGALWWCAHH*RMRAAE
Trigger: CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCA...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACAAAGGGAGGCGGAGGTaGCGCCGAGCTCGCGTACAG +
Preference number: 4 (lower is better)
Translates to: SCTTGGMRRWERQRGLFHKGRRR*RRARVQ
Trigger: CTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTT...GTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGCATGAGCACTGTTTaGTCCGAGGGAGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: QALKGRRRWRRARVQHFESMSTV*SEGGDR
Trigger: TCTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCT...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGCAGACTGGAGCCCCCTaGACACCGGGAAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: KALRREHHNAASREGGEQQTGAP*TPGRGA
Trigger: AGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTG...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGGCACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACAGGTAGGTCTGCTCGCTaGTGCGTTCCTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: GHCDLDWRTSLGITALWTGRSAR*CVPSAP
Trigger: CGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACC...TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAACAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: RREHHNAASREGGEQALKQTQRN*GGRWWE
Trigger: TTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTG...TTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: KGGGGGAELAYSTLRGHHVLVHS*PLNEGG
Trigger: TCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAAC...GTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTATGGGGGCCATGGCGCTaGGCGAGTCTCCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLWGPWR*ASLPAP
Trigger: CGGAGCCGGGAGACTCGCGCAGCGCCATGGCCCCCA...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGAGTGAAGAAGACGTGTaGAGCCCGGTATTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: AKELRRAVVGSCGALWDGSEEDV*SPVFSS
Trigger: ACTGCTAAATACCGGGCTGCACACGTCTTCTTCACT...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGGGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: DLDWRTSLGITALWTQAGGRDLL*QALQYR
Trigger: CCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACC...CCCAGCCTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGGCAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: DLDWRTSLGITALWTQAGQRVAI*SARRSS
Trigger: ACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTG...CCCAGCCTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCCAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSQRVAI*SARRSS
Trigger: ACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTG...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCCAGGAGCTGGGAGCGTaGCTTGTCTGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISQELGA*LVWALP
Trigger: GGGGAGGGCCCAGACAAGGCACGCTCCCAGCTCCTG...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGTGCTTGTGGCGCAGTaGTATCCACAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPVLVAQ*YPQVVV
Trigger: GACGACGACCTGTGGATAGCACTGCGCCACAAGCAC...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACGACACCTCTGCGATGTaGTTGTGGCGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: KGGGGGAELAYSTLRGHHDTSAM*LWRSAI
Trigger: GATAGCACTGCGCCACAAGCACATCGCAGAGGTGTC...GTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGGCTCCCTCAGCATCTGTaGCCATGGCCAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DLDWRTSLGITALWTQAGLPQHL*PWPGPA
Trigger: AGCAGGACCTGGCCATGGGCACAGATGCTGAGGGAG...CCCAGCCTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCCTCCCTCAGCATCTGTaGCCATGGCCAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LAERVQGLCESNGPRTFSLPQHL*PWPGPA
Trigger: AGCAGGACCTGGCCATGGGCACAGATGCTGAGGGAG...GGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCCCTTCCGCTCCGGCTTaGTCCGGCGACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIPSAPA*SGDAAW
Trigger: CCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGG...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACCGCGGTGGTGGGAAGCTaGGGAGCGCTGTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: SVSSSFCGVRMCVDPISTAVVGS*GALWDG
Trigger: CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGC...GGTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR GCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTGCTGGCCTGACTTCGTaGAGACACCCCAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AIALCSGASRTHLFWSIPAGLTS*RHPSLH
Trigger: GTGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGC...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACCTTCCAGCGGGAGTTTaGTTCTCACCTGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KGGGGGAELAYSTLRGHHLPAGV*FSPVRA
Trigger: TGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAG...GTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTCCCGGCGCAGGTGCCTaGGGTTCCGTCCTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: AIALCSGASRTHLFWSIPPGAGA*GSVLRK
Trigger: TTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGG...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCCCCGGCGCAGGTGCCTaGGGTTCCGTCCTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: MLAERVQGLCESNGPRTFPGAGA*GSVLRK
Trigger: TTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGG...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCGACGCCCGGCGCAGGTaGCTGCGGTTCCGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISDARRR*LRFRPK
Trigger: CTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTC...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTGCAAATGTCACCCACCATCAGCCCTCGCTCCGCTGCGGCCGCCACTCGCCGCCTGTGGATGCCGTTTTaGAAATGTCACCCACCATCA +
Preference number: 4 (lower is better)
Translates to: LQMSPTISPRSAAAATRRLWMPF*KCHPPS
Trigger: TGATGGTGGGTGACATTTGCAAAACGGCATCCACAG...GCGGCGAGTGGCGGCCGCAGCGGAGCGAGGGCTGATGGTGGGTGACATTTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR CCA 90 bp AACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCTCAGGTGGGCGCGCTaGGCCAGCCGCAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: NGEKASIHPNSPEISPAVLRWAR*ASRSSP
Trigger: CGGAGAGCTGCGGCTGGCCCAGCGCGCCCACCTGAG...CACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
CDS-3UTR CCA 90 bp CAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATGGCCAATGGGGGCCATaGCGCTGCGCGAGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: QMYLITRKLRLGSGCPPHGQWGP*RCASLP
Trigger: CGGGAGACTCGCGCAGCGCCATGGCCCCCATTGGCC...ATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGGACGGACTTCTCGGATaGAGTGATGAGATACACAGC +
Preference number: 4 (lower is better)
Translates to: EATDAKELRRAVVGSCGADGLLG*SDEIHS
Trigger: GCTGTGTATCTCATCACTCCATCCGAGAAGTCCGTC...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACGCCCGGCGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTCCAGGATCAGGAGCTaGGAGCGTGCCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TPGAGACGSVLRKSGRISSRIRS*ERALSG
Trigger: CCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGA...ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAAGCTGCGGAGCGCTGTaGGATGGGGGCGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: LKMLAERVQGLCESNGPRSCGAL*DGGVFW
Trigger: CCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCT...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTAGCTGCGGAGCGCTGTaGGATGGGGGCGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSSCGAL*DGGVFW
Trigger: CCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCT...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAGGAAAGCCAGACTGGAGCCCCCTGGACACCGGGAAGGGGTGCTGATTTCTTTAGCTGCGGAGCGCTGTaGGATGGGGGCGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: KESQTGAPWTPGRGADFFSCGAL*DGGVFW
Trigger: CCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCT...AAAGAAATCAGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTAGCTGCGGAGCGCTGTaGGATGGGGGCGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPSCGAL*DGGVFW
Trigger: CCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCT...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCACAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 4 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGAQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 4 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACGCCCGGCGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGTTGGGATGATGCCTaGGGACAGAAGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TPGAGACGSVLRKSGRISCWDDA*GQKGLG
Trigger: GCCCAGGCCCTTCTGTCCCCAGGCATCATCCCAACA...ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGCAAGTAATACACACATaGCCTGCAGGAGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: TDAKELRRAVVGSCGALWQVIHT*PAGGQG
Trigger: CCCTTGACCTCCTGCAGGCCATGTGTGTATTACTTG...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGACAGACTGGAGCCCCCTaGACACCGGGAAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: AGACGSVLRKSGRISWEGQTGAP*TPGRGA
Trigger: AGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTG...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGGCCATGGCCAGGTCCATaGACAGTGGAACCGCACTGG +
Preference number: 4 (lower is better)
Translates to: DLDWRTSLGITALWTQAGPWPGP*TVEPHW
Trigger: CCAGTGCGGTTCCACTGTCCATGGACCTGGCCATGG...CCCAGCCTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636509.2
CDS-3UTR TCA 90 bp CCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCACAGATGGGCACGCCGAGGTaGGCCATGTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: PRGYRVCVSPTGQEPSPQMGTPR*AMLVMI
Trigger: GATCATCACCAACATGGCTCACCTCGGCGTGCCCAT...CTGTGGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAGCAGCGTGGAATCGGTaGCGATGGGCACGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: EPICSGPFLTLERRRTREAAWNR*RWARRG
Trigger: ACCTCGGCGTGCCCATCGTCACCGATTCCACGCTGC...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGGGCAGCGTGGAATCGGTaGCGATGGGCACGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: LITRKLRLGSGCPPHSFWAAWNR*RWARRG
Trigger: ACCTCGGCGTGCCCATCGTCACCGATTCCACGCTGC...CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCGCAGCGTGGAATCGGTaGCGATGGGCACGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISAAWNR*RWARRG
Trigger: ACCTCGGCGTGCCCATCGTCACCGATTCCACGCTGC...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSNRSPP*ELVGLL
Trigger: GAGCAGACCTACCAGCTCTCACGGTGGACTCCGATT...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGCAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PEPICSGPFLTLERRRTRQTQRN*GGRWWE
Trigger: TTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTG...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTCAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: CTTGGMRRWERQRGLFHLQTQRN*GGRWWE
Trigger: TTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTG...AAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTGGAGGGACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: GRWWEAAERCGMGACFGGTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...CCCTCCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: SLEKRTPQCSEQRGRGAGVLVHS*PLNEGG
Trigger: TCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAAC...GCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGGGGGCCATGGCGCTaGGCGAGTCTCCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ITGRRRPFILTVQKFLLLWGPWR*ASLPAP
Trigger: CGGAGCCGGGAGACTCGCGCAGCGCCATGGCCCCCA...CAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGAGTGAAGAAGACGTGTaGAGCCCGGTATTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: TDAKELRRAVVGSCGALWSEEDV*SPVFSS
Trigger: ACTGCTAAATACCGGGCTGCACACGTCTTCTTCACT...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGAGTGAAGAAGACGTGTaGAGCCCGGTATTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKSEEDV*SPVFSS
Trigger: ACTGCTAAATACCGGGCTGCACACGTCTTCTTCACT...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: KALRREHHNAASREGGEQGRDLL*QALQYR
Trigger: CCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACC...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACCAGGAGCTGGGAGCGTaGCTTGTCTGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LRKSGRISWEGDGERSDDQELGA*LVWALP
Trigger: GGGGAGGGCCCAGACAAGGCACGCTCCCAGCTCCTG...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GAGCAGGCACTGAGGGGTAGGGACTGGAATGAAGATAGCAGATTAGTCCTCAGTCAGGAGCTGGGAGCGTaGCTTGTCTGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: EQALRGRDWNEDSRLVLSQELGA*LVWALP
Trigger: GGGGAGGGCCCAGACAAGGCACGCTCCCAGCTCCTG...ACTGAGGACTAATCTGCTATCTTCATTCCAGTCCCTACCCCTCAGTGCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGGCACCTCCTTCACCCGTaGCTCCCCGATGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LITRKLRLGSGCPPHSFWHLLHP*LPDAAG
Trigger: ACCAGCGGCATCGGGGAGGCACGGGTGAAGGAGGTG...CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp ACGCCCGGCGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTGTGCTTGTGGCGCAGTaGTATCCACAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: TPGAGACGSVLRKSGRISVLVAQ*YPQVVV
Trigger: GACGACGACCTGTGGATAGCACTGCGCCACAAGCAC...ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGCCTTCCGCTCCGGCTTaGTCCGGCGACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRPSAPA*SGDAAW
Trigger: CCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGG...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCCCTTCCGCTCCGGCTTaGTCCGGCGACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGPSAPA*SGDAAW
Trigger: CCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGG...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTCCTTCCGCTCCGGCTTaGTCCGGCGACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPPSAPA*SGDAAW
Trigger: CCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGG...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp CACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGCCTGACTTCGTaGAGACACCCCAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HCDLDWRTSLGITALWTQAGLTS*RHPSLH
Trigger: GTGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGC...CTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGAGCTGGCCTGACTTCGTaGAGACACCCCAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TTGGMRRWERQRGLFHLGAGLTS*RHPSLH
Trigger: GTGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGC...TCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GCTGATGCGTTCCTTCCGCTCCGGCTTGCTCCGGCGACGCAGCGTGGAATCGGTGCGAGACAGCCTTCCTaGATTTGCTGCTTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: ADAFLPLRLAPATQRGIGARQPS*ICCFSF
Trigger: GAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGC...ACCGATTCCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGAACGCATCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR GCA 90 bp CTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCAATACACACATGGCCTaGAGGAGGTCAAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LAERVQGLCESNGPRTFSNTHMA*RRSRAA
Trigger: CGCCGCCCTTGACCTCCTGCAGGCCATGTGTGTATT...GGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGCCCGGCGCAGGTGCCTaGGGTTCCGTCCTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: PEPICSGPFLTLERRRTRPGAGA*GSVLRK
Trigger: TTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGG...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTCCCGGCGCAGGTGCCTaGGGTTCCGTCCTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: PPEPICSGPFLTLERRRTPGAGA*GSVLRK
Trigger: TTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGG...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACGACGCCCGGCGCAGGTaGCTGCGGTTCCGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: LRKSGRISWEGDGERSDDDARRR*LRFRPK
Trigger: CTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTC...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTGGAGCACAGGGGAGCTaGGGTCAAAGCCTCGATCCA +
Preference number: 4 (lower is better)
Translates to: AIALCSGASRTHLFWSIPGAQGS*GQSLDP
Trigger: TGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCC...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACGACCGGGTGACTTCCTaGGACACCTCTGCGATGTGC +
Preference number: 4 (lower is better)
Translates to: SCTTGGMRRWERQRGLFHDRVTS*DTSAMC
Trigger: GCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC...GTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCGGGACAGGTCCCGCATaGTGGTCTTCTCTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: SLEKRTPQCSEQRGRGAGGTGPA*WSSLQY
Trigger: ATACTGGAGAGAAGACCACCATGCGGGACCTGTCCC...GCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCTCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPSARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGCAGCATCTGTGCCCATaGCCAGGTCCTGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: HYRGYETLGKAKRSVPPWQHLCP*PGPAPL
Trigger: GAGTGGAGCAGGACCTGGCCATGGGCACAGATGCTG...CCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTCAGCATCTGTGCCCATaGCCAGGTCCTGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: AIALCSGASRTHLFWSIPQHLCP*PGPAPL
Trigger: GAGTGGAGCAGGACCTGGCCATGGGCACAGATGCTG...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCCAGCATCTGTGCCCATaGCCAGGTCCTGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: MLAERVQGLCESNGPRTFQHLCP*PGPAPL
Trigger: GAGTGGAGCAGGACCTGGCCATGGGCACAGATGCTG...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCACCTCCCACTTTCCGTTaGCCTGGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGAPPTFR*PGSPRR
Trigger: CCTACGAGGTGACCCAGGCCAACGGAAAGTGGGAGG...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGACAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 4 (lower is better)
Translates to: LRFRPKEIRSYKLGGRRGQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...TCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 4 (lower is better)
Translates to: PPEPICSGPFLTLERRRTGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGAGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 4 (lower is better)
Translates to: TTGGMRRWERQRGLFHLGGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...TCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAATGTTGGGATGATGCCTaGGGACAGAAGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RREHHNAASREGGEQALKCWDDA*GQKGLG
Trigger: GCCCAGGCCCTTCTGTCCCCAGGCATCATCCCAACA...TTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGATGTTGGGATGATGCCTaGGGACAGAAGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LKMLAERVQGLCESNGPRCWDDA*GQKGLG
Trigger: GCCCAGGCCCTTCTGTCCCCAGGCATCATCCCAACA...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACCAGCAGCAGCACAAATaGTGTGCTCACCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: KGGGGGAELAYSTLRGHHQQQHK*CAHHWR
Trigger: TCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTG...GTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCAGCATGAGCACTGTTTaGTCCGAGGGAGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: SLEKRTPQCSEQRGRGAGSMSTV*SEGGDR
Trigger: TCTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCT...GCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCACAGTTGTCCTGGATTAGCTaGGCCAGCAGGGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: PRGYRVCVSPTGQEPSPQLSWIS*ASRALS
Trigger: GGACAATGCCCTGCTGGCTCAGCTAATCCAGGACAA...CTGTGGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCTTGTCCTGGATTAGCTaGGCCAGCAGGGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: LAERVQGLCESNGPRTFSLSWIS*ASRALS
Trigger: GGACAATGCCCTGCTGGCTCAGCTAATCCAGGACAA...GGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCTTTCAGAGACCGGGTaGCTTCCTGGGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSLSETG*LPGTPL
Trigger: CAGAGGTGTCCCAGGAAGTCACCCGGTCTCTGAAAG...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCACTTTCAGAGACCGGGTaGCTTCCTGGGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGALSETG*LPGTPL
Trigger: CAGAGGTGTCCCAGGAAGTCACCCGGTCTCTGAAAG...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCCTTTCAGAGACCGGGTaGCTTCCTGGGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: MLAERVQGLCESNGPRTFLSETG*LPGTPL
Trigger: CAGAGGTGTCCCAGGAAGTCACCCGGTCTCTGAAAG...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGACTTTCAGAGACCGGGTaGCTTCCTGGGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: LKMLAERVQGLCESNGPRLSETG*LPGTPL
Trigger: CAGAGGTGTCCCAGGAAGTCACCCGGTCTCTGAAAG...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGTTTTGTCATAAGTGCTaGCATTGGCATCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: AKELRRAVVGSCGALWDGFCHKC*HWHPAE
Trigger: TTCTGCTGGATGCCAATGTCAGCACTTATGACAAAA...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCAGCGTGGAATCGGTaGCGATGGGCACGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRAAAWNR*RWARRG
Trigger: ACCTCGGCGTGCCCATCGTCACCGATTCCACGCTGC...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGCAGCGTGGAATCGGTaGCGATGGGCACGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: SVLRKSGRISWEGDGERSAAWNR*RWARRG
Trigger: ACCTCGGCGTGCCCATCGTCACCGATTCCACGCTGC...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAGGCTTCAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCGCAGCGTGGAATCGGTaGCGATGGGCACGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: QASDVPNHKKTALREWLPAAWNR*RWARRG
Trigger: ACCTCGGCGTGCCCATCGTCACCGATTCCACGCTGC...GGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTGAAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTGGTAGGTCTGCTCGCTaGTGCGTTCCTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGGRSAR*CVPSAP
Trigger: CGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACC...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SCTTGGMRRWERQRGLFHNRSPP*ELVGLL
Trigger: GAGCAGACCTACCAGCTCTCACGGTGGACTCCGATT...GTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KALRREHHNAASREGGEQNRSPP*ELVGLL
Trigger: GAGCAGACCTACCAGCTCTCACGGTGGACTCCGATT...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGNRSPP*ELVGLL
Trigger: GAGCAGACCTACCAGCTCTCACGGTGGACTCCGATT...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAACAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: EPICSGPFLTLERRRTREQTQRN*GGRWWE
Trigger: TTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTG...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVCTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACTTTCCGTTGGCCTGGGTCACCTCGTAGGCGCAGCGCATCTCATTCAGGCTCACCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: TFRWPGSPRRRSASHSGSPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...TGAGCCTGAATGAGATGCGCTGCGCCTACGAGGTGACCCAGGCCAACGGAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGGTACAGGGTCTGTGTaGGTCCAACGGGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: KALRREHHNAASREGGEQGTGSV*VQRAKN
Trigger: GTTCTTGGCCCGTTGGACTCACACAGACCCTGTACC...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGGCACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACAGGTACAGGGTCTGTGTaGGTCCAACGGGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: GHCDLDWRTSLGITALWTGTGSV*VQRAKN
Trigger: GTTCTTGGCCCGTTGGACTCACACAGACCCTGTACC...TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTTCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 4 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPSRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCCAAGGTCCTGAAGCATaGGCACTGTTTGGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSQGPEA*ALFGPR
Trigger: CCTCGGACCAAACAGTGCTCATGCTTCAGGACCTTG...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACCGACAAACAAGGTCCTaGAGCATGAGCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: KGGGGGAELAYSTLRGHHRQTRS*SMSTVW
Trigger: CCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCG...GTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTGGGGGCCATGGCGCTaGGCGAGTCTCCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GRQMQFVSLPTFCIYENSWGPWR*ASLPAP
Trigger: CGGAGCCGGGAGACTCGCGCAGCGCCATGGCCCCCA...ACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp TCAATTCATGGAGCACAGGGGAGCTGGGGTCAAAGCCTCGATCCAGGATCAGGAGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: SIHGAQGSWGQSLDPGSGGRDLL*QALQYR
Trigger: CCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACC...TCCTGATCCTGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCCATGAATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR GCA 90 bp CTTCTTGAGACAACTGTCAGAGGAACCTTAAGGCCGGAGGAGGAGTCCAGGCCACAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LLETTVRGTLRPEEESRPQRVAI*SARRSS
Trigger: ACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTG...TGGCCTGGACTCCTCCTCCGGCCTTAAGGTTCCTCTGACAGTTGTCTCAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR GCA 90 bp GGGAGGGAGACGGGGAGAGATCTGACGACTAATCTCAGTGCAAGGGGAGATTTCCAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GRETGRDLTTNLSARGDFQRVAI*SARRSS
Trigger: ACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTG...GAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCTCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCAGGAGCTGGGAGCGTaGCTTGTCTGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: NGEKASIHPNSPEISPAVQELGA*LVWALP
Trigger: GGGGAGGGCCCAGACAAGGCACGCTCCCAGCTCCTG...CACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CGCATTCCTTCTGGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTCAGGAGCTGGGAGCGTaGCTTGTCTGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RIPSGRQMQFVSLPTFCIQELGA*LVWALP
Trigger: GGGGAGGGCCCAGACAAGGCACGCTCCCAGCTCCTG...AATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAGGAATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp GCTTTGGAAAGAGTCAGCAGAGTCCAAGGAATAGACCTGGGATTCATACGGGAGCAGGAGCTGGGAGCGTaGCTTGTCTGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ALERVSRVQGIDLGFIREQELGA*LVWALP
Trigger: GGGGAGGGCCCAGACAAGGCACGCTCCCAGCTCCTG...CTCCCGTATGAATCCCAGGTCTATTCCTTGGACTCTGCTGACTCTTTCCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR GCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTCAGGAGCTGGGAGCGTaGCTTGTCTGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPQELGA*LVWALP
Trigger: GGGGAGGGCCCAGACAAGGCACGCTCCCAGCTCCTG...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGACCCGTGCCTCCCCGATaGCGCTGGTCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: AGACGSVLRKSGRISWEGPVPPR*RWSHTC
Trigger: ACAAGTATGAGACCAGCGGCATCGGGGAGGCACGGG...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCCACCTCCTTCACCCGTaGCTCCCCGATGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIHLLHP*LPDAAG
Trigger: ACCAGCGGCATCGGGGAGGCACGGGTGAAGGAGGTG...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAAATGAGCTGTTGCACCTCCTTCACCCGTaGCTCCCCGATGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SGPFLTLERRRTRENELLHLLHP*LPDAAG
Trigger: ACCAGCGGCATCGGGGAGGCACGGGTGAAGGAGGTG...CAACAGCTCATTTTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAAGTGCTTGTGGCGCAGTaGTATCCACAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: RREHHNAASREGGEQALKVLVAQ*YPQVVV
Trigger: GACGACGACCTGTGGATAGCACTGCGCCACAAGCAC...TTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAGGAAAGCCAGACTGGAGCCCCCTGGACACCGGGAAGGGGTGCTGATTTCTTTGTGCTTGTGGCGCAGTaGTATCCACAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: KESQTGAPWTPGRGADFFVLVAQ*YPQVVV
Trigger: GACGACGACCTGTGGATAGCACTGCGCCACAAGCAC...AAAGAAATCAGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CACAGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCTTCCTGGGACACCTCTaGGATGTGCTTGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: HSCTTGGMRRWERQRGLFFLGHL*DVLVAQ
Trigger: CTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAA...GAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACCGCTGGCCTGACTTCGTaGAGACACCCCAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SVSSSFCGVRMCVDPISTAGLTS*RHPSLH
Trigger: GTGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGC...GGTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR GCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCAAGAGAACACCACAATaGAGCGAGCAGAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSKRTPQ*SEQRGR
Trigger: CCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTT...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACCCCGGCGCAGGTGCCTaGGGTTCCGTCCTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSYQHPGAGA*GSVLRK
Trigger: TTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGG...GTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR GCA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGTTCTTTATCACATCATaGATAATCTCTCACGCGCCG +
Preference number: 4 (lower is better)
Translates to: AKELRRAVVGSCGALWDGFFITS*IISHAP
Trigger: CGGCGCGTGAGAGATTATGCATGATGTGATAAAGAA...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR GCA 90 bp GCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTTCAGCACCACAAAAGTaGCCTGGCTCCAGCTCACAT +
Preference number: 4 (lower is better)
Translates to: ALRREHHNAASREGGEQASAPQK*PGSSSH
Trigger: ATGTGAGCTGGAGCCAGGGCACTTTTGTGGTGCTGA...AGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR CCA 90 bp CTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTACAGCCCTTTGTATTTCTCAGGTGGGCGCGCTaGGCCAGCCGCAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: LLLLSKSSSSELLQPFVFLRWAR*ASRSSP
Trigger: CGGAGAGCTGCGGCTGGCCCAGCGCGCCCACCTGAG...AAATACAAAGGGCTGTAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp CTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGGCCAATGGGGGCCATaGCGCTGCGCGAGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: LTVFPKRWRLPAGVCFSPGQWGP*RCASLP
Trigger: CGGGAGACTCGCGCAGCGCCATGGCCCCCATTGGCC...AGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGGGAGCGTGCCTTGTCTaGGCCCTCCCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAEGACLV*ALPHCW
Trigger: CCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCC...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGGAGCACAGGGGAGCTaGGGTCAAAGCCTCGATCCA +
Preference number: 4 (lower is better)
Translates to: PEPICSGPFLTLERRRTRGAQGS*GQSLDP
Trigger: TGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCC...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGGACCGGGTGACTTCCTaGGACACCTCTGCGATGTGC +
Preference number: 4 (lower is better)
Translates to: GMRRWERQRGLFHLGPPEDRVTS*DTSAMC
Trigger: GCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCTCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LAERVQGLCESNGPRTFSSARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...GGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTCAGCATCTGTGCCCATaGCCAGGTCCTGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: CTTGGMRRWERQRGLFHLQHLCP*PGPAPL
Trigger: GAGTGGAGCAGGACCTGGCCATGGGCACAGATGCTG...AAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTGGTATCTGGGCGTGCTaGATCAGTTTGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPGIWAC*ISLFRF
Trigger: AAACCTGAACAAACTGATCCAGCACGCCCAGATACC...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACTCCTCCGGGGGTATCTaGGCGTGCTGGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SCTTGGMRRWERQRGLFHSSGGI*ACWISL
Trigger: CAAACTGATCCAGCACGCCCAGATACCCCCGGAGGA...GTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGCCTCCCACTTTCCGTTaGCCTGGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: PEPICSGPFLTLERRRTRPPTFR*PGSPRR
Trigger: CCTACGAGGTGACCCAGGCCAACGGAAAGTGGGAGG...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACTGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: SCTTGGMRRWERQRGLFHCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...GTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGTGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: KALRREHHNAASREGGEQCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCAAAGGGAGGCGGAGGTaGCGCCGAGCTCGCGTACAG +
Preference number: 4 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIKGRRR*RRARVQ
Trigger: CTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTT...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCAGGTCGTATAAGTTaGGAGGGAGACGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SLEKRTPQCSEQRGRGAGSGRIS*EGDGER
Trigger: TCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGA...GCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAATGTCACCCACCATCAGCCCTCGCTCCGCTGCGGCCGCCACTCGCCGCCACCAAAAATCCATTCATGTaGTGCCTTTCATCCAAACCC +
Preference number: 4 (lower is better)
Translates to: KCHPPSALAPLRPPLAATKNPFM*CLSSKP
Trigger: GGGTTTGGATGAAAGGCACCACATGAATGGATTTTT...GGTGGCGGCGAGTGGCGGCCGCAGCGGAGCGAGGGCTGATGGTGGGTGACATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR TCA 90 bp GCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTATCCTCATGCTTAACTaGTCCACCACCAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: ALRREHHNAASREGGEQAILMLN*STTSTF
Trigger: GAAGGTGCTGGTGGTGGATCAGTTAAGCATGAGGAT...AGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACAGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCTGGACAAGAGTCAGTaGAGAAGACGTGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: HSCTTGGMRRWERQRGLFLDKSQ*RRRVQP
Trigger: GGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAG...GAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCACTGGACAAGAGTCAGTaGAGAAGACGTGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGALDKSQ*RRRVQP
Trigger: GGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAG...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGGCACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACTGGACAAGAGTCAGTaGAGAAGACGTGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GHCDLDWRTSLGITALWTLDKSQ*RRRVQP
Trigger: GGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAG...TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCCTGGACAAGAGTCAGTaGAGAAGACGTGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: MLAERVQGLCESNGPRTFLDKSQ*RRRVQP
Trigger: GGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAG...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGTTGTCCTGGATTAGCTaGGCCAGCAGGGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGLSWIS*ASRALS
Trigger: GGACAATGCCCTGCTGGCTCAGCTAATCCAGGACAA...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: AGACGSVLRKSGRISWEGNRSPP*ELVGLL
Trigger: GAGCAGACCTACCAGCTCTCACGGTGGACTCCGATT...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTCAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SVLRKSGRISWEGDGERSQTQRN*GGRWWE
Trigger: TTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTG...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAAATGAGCTGTTGCAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SGPFLTLERRRTRENELLQTQRN*GGRWWE
Trigger: TTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTG...CAACAGCTCATTTTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AIALCSGASRTHLFWSIPRRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 4 (lower is better)
Translates to: CTTGGMRRWERQRGLFHLDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...AAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGCCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: KALRREHHNAASREGGEQPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCACAGCCACCTTGGACCTCCTaGGATATCCTGATTGTCACC +
Preference number: 4 (lower is better)
Translates to: PRGYRVCVSPTGQEPSPQPPWTS*DILIVT
Trigger: GGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGG...CTGTGGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACAGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCAATGAGCTGTTGGGATaGTGCCTGGGGACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: HSCTTGGMRRWERQRGLFNELLG*CLGTEG
Trigger: CCCTTCTGTCCCCAGGCATCATCCCAACAGCTCATT...GAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGGCACTGTGGTACAGGGTCTGTGTaGGTCCAACGGGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: QRDGGFQREFASHLSGHCGTGSV*VQRAKN
Trigger: GTTCTTGGCCCGTTGGACTCACACAGACCCTGTACC...ACAGTGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCTCTTACAAACACGATaGTGTATGACCCCACACAAC +
Preference number: 4 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPLLQTR*CMTPHN
Trigger: GTTGTGTGGGGTCATACATCATCGTGTTTGTAAGAG...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGAGAGCTGCTGAGTCTTaGGGATGGCGAGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: KALRREHHNAASREGGEQRAAES*GWRDSL
Trigger: AAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCT...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACAGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCAGAGCTGCTGAGTCTTaGGGATGGCGAGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: HSCTTGGMRRWERQRGLFRAAES*GWRDSL
Trigger: AAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCT...GAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAACAAGGTCCTGAAGCATaGGCACTGTTTGGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: RREHHNAASREGGEQALKQGPEA*ALFGPR
Trigger: CCTCGGACCAAACAGTGCTCATGCTTCAGGACCTTG...TTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTAGAATGGTACAGAGATaGTATATGTTTGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFRMVQR*YMFVLQ
Trigger: CTGAAGCACAAACATATATCATCTCTGTACCATTCT...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACTTTCCGTTGGCCTGGGTCACCTCGTAGGCGCAGCGCATCTCATTCAGGCTCAGCAGTTTCTGTGGGGTaGGGATGTGTGTGGATCCTA +
Preference number: 4 (lower is better)
Translates to: TFRWPGSPRRRSASHSGSAVSVG*GCVWIL
Trigger: TAGGATCCACACACATCCTCACCCCACAGAAACTGC...TGAGCCTGAATGAGATGCGCTGCGCCTACGAGGTGACCCAGGCCAACGGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp TCTTATTTAGCACTGTGGATGCCGTTTTGCAAATGTCACCCACCATCAGCCCTCCCTGCCACCGTGGTCTaGGCTCCCGAAGCGTTCGGC +
Preference number: 4 (lower is better)
Translates to: SYLALWMPFCKCHPPSALPATVV*APEAFG
Trigger: GCCGAACGCTTCGGGAGCTCAGACCACGGTGGCAGG...GAGGGCTGATGGTGGGTGACATTTGCAAAACGGCATCCACAGTGCTAAATAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR TCA 90 bp CTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTCGCGCTCCATCTGCCTaGAACCCCGCTCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LTVFPKRWRLPAGVCFSPRAPSA*NPARVL
Trigger: CAGGACCCGAGCGGGGTTTCAGGCAGATGGAGCGCG...AGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR GCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCCAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISQRVAI*SARRSS
Trigger: ACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTG...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCCAGGAGCTGGGAGCGTaGCTTGTCTGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFQELGA*LVWALP
Trigger: GGGGAGGGCCCAGACAAGGCACGCTCCCAGCTCCTG...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGCACCTCCTTCACCCGTaGCTCCCCGATGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQHLLHP*LPDAAG
Trigger: ACCAGCGGCATCGGGGAGGCACGGGTGAAGGAGGTG...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTGACACCTCTGCGATGTaGTTGTGGCGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPDTSAM*LWRSAI
Trigger: GATAGCACTGCGCCACAAGCACATCGCAGAGGTGTC...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTGACACCTCTGCGATGTaGTTGTGGCGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSDTSAM*LWRSAI
Trigger: GATAGCACTGCGCCACAAGCACATCGCAGAGGTGTC...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGTTCCTGGGACACCTCTaGGATGTGCTTGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: HCDLDWRTSLGITALWTQFLGHL*DVLVAQ
Trigger: CTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAA...CTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCACAGTCCTCAGCAAGGTaGAGGTGGGTGGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGAQSSAR*RWVEYL
Trigger: CAAGTACTCCACCCACCTGCACCTTGCTGAGGACTG...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: TDAKELRRAVVGSCGALWRVCLR*LGNASY
Trigger: GTATGAAGCATTACCAAGGCACCGTAGACAAACTCT...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPGGIWA*WISLFR
Trigger: CCTGAACAAACTGATCCAGCACGCCCAGATACCCCC...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: MLAERVQGLCESNGPRTFGGIWA*WISLFR
Trigger: CCTGAACAAACTGATCCAGCACGCCCAGATACCCCC...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCGCGGTGGTGGGAAGCTaGGGAGCGCTGTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TNCFSKEMEASSGSLLLTAVVGS*GALWDG
Trigger: CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGC...GGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACGCCTCCACCCACAGCTaGACTACCGGGGGTATGAGA +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSYQHASTHS*TTGGMR
Trigger: TCTCATACCCCCGGTAGTGCAGCTGTGGGTGGAGGC...GTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR GCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGCTTCCAGCGGGAGTTTaGTTCTCACCTGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KALRREHHNAASREGGEQLPAGV*FSPVRA
Trigger: TGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAG...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCACTTCCAGCGGGAGTTTaGTTCTCACCTGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGALPAGV*FSPVRA
Trigger: TGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAG...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAAATACACACATGGCCTaGAGGAGGTCAAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: AGACGSVLRKSGRISWEGNTHMA*RRSRAA
Trigger: CGCCGCCCTTGACCTCCTGCAGGCCATGTGTGTATT...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACCCCGGCGCAGGTGCCTaGGGTTCCGTCCTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LRKSGRISWEGDGERSDDPGAGA*GSVLRK
Trigger: TTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGG...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGGACGCCCGGCGCAGGTaGCTGCGGTTCCGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: ITGRRRPFILTVQKFLLLDARRR*LRFRPK
Trigger: CTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTC...CAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCTCACTGATGAGAGAGTaGACGGACTTCTCGGATGGA +
Preference number: 4 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPSLMRE*TDFSDG
Trigger: TCCATCCGAGAAGTCCGTCCACTCTCTCATCAGTGA...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: HYRGYETLGKAKRSVPPWGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...CCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCGCCCTCCCCCATTGTTaGATCATCAGCTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: SLEKRTPQCSEQRGRGAGALPHC*IISFIG
Trigger: GCCTATAAAGCTGATGATCCAACAATGGGGGAGGGC...GCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGCCCTCCCCCATTGTTaGATCATCAGCTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPALPHC*IISFIG
Trigger: GCCTATAAAGCTGATGATCCAACAATGGGGGAGGGC...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCGGAGCGTGCCTTGTCTaGGCCCTCCCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDPISGACLV*ALPHCW
Trigger: CCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCC...GCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR CCA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTGGAGCACAGGGGAGCTaGGGTCAAAGCCTCGATCCA +
Preference number: 4 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGGAQGS*GQSLDP
Trigger: TGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCC...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGTCTGCGATGTGCTTGTaGCGCAGTGCTATCCACAGG +
Preference number: 4 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGSAMCL*RSAIHR
Trigger: CCTGTGGATAGCACTGCGCCACAAGCACATCGCAGA...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTGGGACAGGTCCCGCATaGTGGTCTTCTCTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: AIALCSGASRTHLFWSIPGTGPA*WSSLQY
Trigger: ATACTGGAGAGAAGACCACCATGCGGGACCTGTCCC...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGTCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: HYRGYETLGKAKRSVPPWSARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...CCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGATCCTCCGGGGGTATCTaGGCGTGCTGGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: TTGGMRRWERQRGLFHLGSSGGI*ACWISL
Trigger: CAAACTGATCCAGCACGCCCAGATACCCCCGGAGGA...TCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGTCCTCCGGGGGTATCTaGGCGTGCTGGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GMRRWERQRGLFHLGPPESSGGI*ACWISL
Trigger: CAAACTGATCCAGCACGCCCAGATACCCCCGGAGGA...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGACTGCGGTACTCGCCTaGGGCCTTGTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: KALRREHHNAASREGGEQTAVLA*GLVLMP
Trigger: TGGCATAAGAACAAGGCCCCAGGCGAGTACCGCAGT...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGCCTCCCACTTTCCGTTaGCCTGGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: PNHKKTALREWLPSAFLLPPTFR*PGSPRR
Trigger: CCTACGAGGTGACCCAGGCCAACGGAAAGTGGGAGG...CAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTCAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 4 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRAQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSGGMRR*ERQRGL
Trigger: CAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCC...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCCACTGTGACTTAGACTaGAGGACTTCCCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSHCDLD*RTSLGI
Trigger: GATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTTTCCGTTGGCCTGGGTCACCTCGTAGGCGCAGCGCATCTCATTCAGGCTCACACTGTGACTTAGACTaGAGGACTTCCCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: TFRWPGSPRRRSASHSGSHCDLD*RTSLGI
Trigger: GATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG...TGAGCCTGAATGAGATGCGCTGCGCCTACGAGGTGACCCAGGCCAACGGAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR CCA 90 bp GAGCAGGCACTGAGGGGTAGGGACTGGAATGAAGATAGCAGATTAGTCCTCAGTGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 4 (lower is better)
Translates to: EQALRGRDWNEDSRLVLSGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...ACTGAGGACTAATCTGCTATCTTCATTCCAGTCCCTACCCCTCAGTGCCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 4 (lower is better)
Translates to: LRKSGRISWEGDGERSDDGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGGTGTGCTCACCACTaGAGAATGAGAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSWCAHH*RMRAAE
Trigger: CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCA...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCCAGCAGCAGCACAAATaGTGTGCTCACCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: LAERVQGLCESNGPRTFSQQQHK*CAHHWR
Trigger: TCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTG...GGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGCATGAGCACTGTTTaGTCCGAGGGAGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGSMSTV*SEGGDR
Trigger: TCTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCT...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTAGCATGAGCACTGTTTaGTCCGAGGGAGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: AIALCSGASRTHLFWSIPSMSTV*SEGGDR
Trigger: TCTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCT...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCTTTCATCCAAACCCATAAACAACCATTTCCTCCCTGCCACCGTGGTCTGAGCTCCTCCCTGCCACCGTaGTCTGAGCTCCCGAAGCGT +
Preference number: 4 (lower is better)
Translates to: PFIQTHKQPFPPCHRGLSSSLPP*SELPKR
Trigger: ACGCTTCGGGAGCTCAGACCACGGTGGCAGGGAGGA...GCTCAGACCACGGTGGCAGGGAGGAAATGGTTGTTTATGGGTTTGGATGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR CCA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCTCTGCGGCCCAGCTCTaGGCTCTCCCCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGSAAQL*ALPTAS
Trigger: GGATGCTGTGGGGAGAGCCCAGAGCTGGGCCGCAGA...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637521.2
CDS-3UTR TCA 90 bp CAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATCTCCGACAACAGCTTTaGGGCCAATGGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: QMYLITRKLRLGSGCPPHLRQQL*GQWGPW
Trigger: CCATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAG...ATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGATTCCCCCTTCTTCTTaGCCTTCTTTATCACATCAT +
Preference number: 4 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKIPPSS*PSLSHH
Trigger: ATGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAAT...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTCTGGACAAGAGTCAGTaGAGAAGACGTGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PPEPICSGPFLTLERRRTLDKSQ*RRRVQP
Trigger: GGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAG...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGACTGGACAAGAGTCAGTaGAGAAGACGTGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: AGACGSVLRKSGRISWEGLDKSQ*RRRVQP
Trigger: GGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAG...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGCTTTCAGAGACCGGGTaGCTTCCTGGGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAELSETG*LPGTPL
Trigger: CAGAGGTGTCCCAGGAAGTCACCCGGTCTCTGAAAG...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTAGCTCTTTCTGGTACTaGGGCATCTTCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: ALRREHHNAASREGGEQASSFWY*GIFFSI
Trigger: GATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCT...AGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAAGGGTGGAGTACTTGCTaGGCTCTTTCTGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: RREHHNAASREGGEQALKGWSTC*ALSGTE
Trigger: CTCAGTACCAGAAAGAGCTCAGCAAGTACTCCACCC...TTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGAGATGTAGAGAAGGATaGTGCGGATTTTGTCATAAG +
Preference number: 4 (lower is better)
Translates to: TDAKELRRAVVGSCGALWRCREG*CGFCHK
Trigger: CTTATGACAAAATCCGCATCATCCTTCTCTACATCT...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGATGGGCACGCCGAGGTaGGCCATGTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAEMGTPR*AMLVMI
Trigger: GATCATCACCAACATGGCTCACCTCGGCGTGCCCAT...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGGATGGGCACGCCGAGGTaGGCCATGTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: LITRKLRLGSGCPPHSFWMGTPR*AMLVMI
Trigger: GATCATCACCAACATGGCTCACCTCGGCGTGCCCAT...CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAATGGGCACGCCGAGGTaGGCCATGTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: EPICSGPFLTLERRRTREMGTPR*AMLVMI
Trigger: GATCATCACCAACATGGCTCACCTCGGCGTGCCCAT...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCGCAGCGTGGAATCGGTaGCGATGGGCACGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: RRPFILTVQKFLLLCTNCAAWNR*RWARRG
Trigger: ACCTCGGCGTGCCCATCGTCACCGATTCCACGCTGC...GCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTGCAGCGTGGAATCGGTaGCGATGGGCACGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLAAWNR*RWARRG
Trigger: ACCTCGGCGTGCCCATCGTCACCGATTCCACGCTGC...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGGTAGGTCTGCTCGCTaGTGCGTTCCTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQGRSAR*CVPSAP
Trigger: CGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACC...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCGGTAGGTCTGCTCGCTaGTGCGTTCCTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVGRSAR*CVPSAP
Trigger: CGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACC...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGNRSPP*ELVGLL
Trigger: GAGCAGACCTACCAGCTCTCACGGTGGACTCCGATT...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AGACGSVLRKSGRISWEGRRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: PEPICSGPFLTLERRRTRRRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAACCACCTTGGACCTCCTaGGATATCCTGATTGTCACC +
Preference number: 4 (lower is better)
Translates to: RREHHNAASREGGEQALKPPWTS*DILIVT
Trigger: GGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGG...TTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGAATGAGCTGTTGGGATaGTGCCTGGGGACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: HCDLDWRTSLGITALWTQNELLG*CLGTEG
Trigger: CCCTTCTGTCCCCAGGCATCATCCCAACAGCTCATT...CTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGGCACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACAGAGAATGAGAGCTGCTaGGTCTTGAGGATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: GHCDLDWRTSLGITALWTENESC*VLRMAR
Trigger: TCTCGCCATCCTCAAGACTCAGCAGCTCTCATTCTC...TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACAGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCGCAGTTTCTGTGGGGTaGGGATGTGTGTGGATCCTA +
Preference number: 4 (lower is better)
Translates to: HSCTTGGMRRWERQRGLFAVSVG*GCVWIL
Trigger: TAGGATCCACACACATCCTCACCCCACAGAAACTGC...GAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000373299.5
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
CDS-3UTR TCA 90 bp ACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCCAACCGGGAAGGGGTGCTaGTTTCTTTATTTATTAGAC +
Preference number: 4 (lower is better)
Translates to: TGCGGGRWPDFVQTPQPPTGKGC*FLYLLD
Trigger: GTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGT...TGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRAGRDLL*QALQYR
Trigger: CCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACC...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIGRDLL*QALQYR
Trigger: CCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACC...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGACAGGAGCTGGGAGCGTaGCTTGTCTGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LRMARQPSCICCFSFCFRQELGA*LVWALP
Trigger: GGGGAGGGCCCAGACAAGGCACGCTCCCAGCTCCTG...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATCCCGTGCCTCCCCGATaGCGCTGGTCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: QMYLITRKLRLGSGCPPHPVPPR*RWSHTC
Trigger: ACAAGTATGAGACCAGCGGCATCGGGGAGGCACGGG...ATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTCCCGTGCCTCCCCGATaGCGCTGGTCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRAPVPPR*RWSHTC
Trigger: ACAAGTATGAGACCAGCGGCATCGGGGAGGCACGGG...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTCACCTCCTTCACCCGTaGCTCCCCGATGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLHLLHP*LPDAAG
Trigger: ACCAGCGGCATCGGGGAGGCACGGGTGAAGGAGGTG...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACACCTCCTTCACCCGTaGCTCCCCGATGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGHLLHP*LPDAAG
Trigger: ACCAGCGGCATCGGGGAGGCACGGGTGAAGGAGGTG...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTGTGCTTGTGGCGCAGTaGTATCCACAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGVLVAQ*YPQVVV
Trigger: GACGACGACCTGTGGATAGCACTGCGCCACAAGCAC...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGCAGTCCTCAGCAAGGTaGAGGTGGGTGGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: HCDLDWRTSLGITALWTQQSSAR*RWVEYL
Trigger: CAAGTACTCCACCCACCTGCACCTTGCTGAGGACTG...CTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGACAGTCCTCAGCAAGGTaGAGGTGGGTGGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: LRFRPKEIRSYKLGGRRGQSSAR*RWVEYL
Trigger: CAAGTACTCCACCCACCTGCACCTTGCTGAGGACTG...TCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GAGCAGGCACTGAGGGGTAGGGACTGGAATGAAGATAGCAGATTAGTCCTCAGTCTCCCTCAGCATCTGTaGCCATGGCCAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EQALRGRDWNEDSRLVLSLPQHL*PWPGPA
Trigger: AGCAGGACCTGGCCATGGGCACAGATGCTGAGGGAG...ACTGAGGACTAATCTGCTATCTTCATTCCAGTCCCTACCCCTCAGTGCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GGGAGGGAGACGGGGAGAGATCTGACGACTAATCTCAGTGCAAGGGGAGATTTCGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: GRETGRDLTTNLSARGDFGGIWA*WISLFR
Trigger: CCTGAACAAACTGATCCAGCACGCCCAGATACCCCC...GAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCTCCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TCATCATCATCATCATCATCATCATCATCAATGGCTGAGCCCTCACTGTGCTTCCCTTCCGCTCCGGCTTaGTCCGGCGACGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSSMAEPSLCFPSAPA*SGDAAW
Trigger: CCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGG...GAAGCACAGTGAGGGCTCAGCCATTGATGATGATGATGATGATGATGATGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGTCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 4 (lower is better)
Translates to: QALKGRRRWRRARVQHFESRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGGCTGGCCTGACTTCGTaGAGACACCCCAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PKFLPFHTQAMCTSPRVMAGLTS*RHPSLH
Trigger: GTGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGC...CATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCAGCCTTCCTGCATTTaGTGCTTTAGTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPQPSCI*CFSFCF
Trigger: AAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTG...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCGCAGCACAAATGGTGTaGTCACCACTGGAGAATGAG +
Preference number: 4 (lower is better)
Translates to: LAERVQGLCESNGPRTFSAAQMV*SPLENE
Trigger: CTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGC...GGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGAAAGAGAACACCACAATaGAGCGAGCAGAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: TTGGMRRWERQRGLFHLGKRTPQ*SEQRGR
Trigger: CCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTT...TCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGCCCGGCGCAGGTGCCTaGGGTTCCGTCCTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQPGAGA*GSVLRK
Trigger: TTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGG...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TCTTATTTAGCACTGTGGATGCCGTTTTGCAAATGTCACCCACCATCAGCCCTCCGCAACCAGGGAGATTaGAGACTGCGGCGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: SYLALWMPFCKCHPPSALRNQGD*RLRRWA
Trigger: CGCCCAGCGCCGCAGTCTGCAATCTCCCTGGTTGCG...GAGGGCTGATGGTGGGTGACATTTGCAAAACGGCATCCACAGTGCTAAATAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR CCA 90 bp CTTCTTGAGACAACTGTCAGAGGAACCTTAAGGCCGGAGGAGGAGTCCAGGCCAGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: LLETTVRGTLRPEEESRPGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...TGGCCTGGACTCCTCCTCCGGCCTTAAGGTTCCTCTGACAGTTGTCTCAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR CCA 90 bp CCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCACAGGCCCTCCCCCATTGTTaGATCATCAGCTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: PRGYRVCVSPTGQEPSPQALPHC*IISFIG
Trigger: GCCTATAAAGCTGATGATCCAACAATGGGGGAGGGC...CTGTGGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTTCCAGGATCAGGAGCTaGGAGCGTGCCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SVLRKSGRISWEGDGERSSRIRS*ERALSG
Trigger: CCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGA...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTCCAGGATCAGGAGCTaGGAGCGTGCCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEISRIRS*ERALSG
Trigger: CCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGA...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCGGAGCACAGGGGAGCTaGGGTCAAAGCCTCGATCCA +
Preference number: 4 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIGAQGS*GQSLDP
Trigger: TGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCC...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGTCTGCGATGTGCTTGTaGCGCAGTGCTATCCACAGG +
Preference number: 4 (lower is better)
Translates to: PEPICSGPFLTLERRRTRSAMCL*RSAIHR
Trigger: CCTGTGGATAGCACTGCGCCACAAGCACATCGCAGA...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGATCTGCGATGTGCTTGTaGCGCAGTGCTATCCACAGG +
Preference number: 4 (lower is better)
Translates to: LRFRPKEIRSYKLGGRRGSAMCL*RSAIHR
Trigger: CCTGTGGATAGCACTGCGCCACAAGCACATCGCAGA...TCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GGGAGGGAGACGGGGAGAGATCTGACGACTAATCTCAGTGCAAGGGGAGATTTCTCTGCGATGTGCTTGTaGCGCAGTGCTATCCACAGG +
Preference number: 4 (lower is better)
Translates to: GRETGRDLTTNLSARGDFSAMCL*RSAIHR
Trigger: CCTGTGGATAGCACTGCGCCACAAGCACATCGCAGA...GAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCTCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACGACCGGGTGACTTCCTaGGACACCTCTGCGATGTGC +
Preference number: 4 (lower is better)
Translates to: LRKSGRISWEGDGERSDDDRVTS*DTSAMC
Trigger: GCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACCGGGTGACTTCCTaGGACACCTCTGCGATGTGC +
Preference number: 4 (lower is better)
Translates to: SVLRKSGRISWEGDGERSDRVTS*DTSAMC
Trigger: GCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGGGACAGGTCCCGCATaGTGGTCTTCTCTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: PEPICSGPFLTLERRRTRGTGPA*WSSLQY
Trigger: ATACTGGAGAGAAGACCACCATGCGGGACCTGTCCC...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAATCTTCTTCAGCATCTaGGACAGGTCCCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGAIFFSI*DRSRMV
Trigger: CACCATGCGGGACCTGTCCCAGATGCTGAAGAAGAT...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACAGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCATCTTCTTCAGCATCTaGGACAGGTCCCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: HSCTTGGMRRWERQRGLFIFFSI*DRSRMV
Trigger: CACCATGCGGGACCTGTCCCAGATGCTGAAGAAGAT...GAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGTCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PEPICSGPFLTLERRRTRSARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGGCACTGTTCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QRDGGFQREFASHLSGHCSARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...ACAGTGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATCAGCATCTGTGCCCATaGCCAGGTCCTGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: QMYLITRKLRLGSGCPPHQHLCP*PGPAPL
Trigger: GAGTGGAGCAGGACCTGGCCATGGGCACAGATGCTG...ATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTCAGCATCTGTGCCCATaGCCAGGTCCTGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: SVLRKSGRISWEGDGERSQHLCP*PGPAPL
Trigger: GAGTGGAGCAGGACCTGGCCATGGGCACAGATGCTG...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGTCCTCCGGGGGTATCTaGGCGTGCTGGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: PNHKKTALREWLPSAFLLSSGGI*ACWISL
Trigger: CAAACTGATCCAGCACGCCCAGATACCCCCGGAGGA...CAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTCCTCCGGGGGTATCTaGGCGTGCTGGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISSSGGI*ACWISL
Trigger: CAAACTGATCCAGCACGCCCAGATACCCCCGGAGGA...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGACTGCGGTACTCGCCTaGGGCCTTGTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: PEPICSGPFLTLERRRTRTAVLA*GLVLMP
Trigger: TGGCATAAGAACAAGGCCCCAGGCGAGTACCGCAGT...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGAACTGCGGTACTCGCCTaGGGCCTTGTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: TTGGMRRWERQRGLFHLGTAVLA*GLVLMP
Trigger: TGGCATAAGAACAAGGCCCCAGGCGAGTACCGCAGT...TCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGGCACTGTACTGCGGTACTCGCCTaGGGCCTTGTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: QRDGGFQREFASHLSGHCTAVLA*GLVLMP
Trigger: TGGCATAAGAACAAGGCCCCAGGCGAGTACCGCAGT...ACAGTGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGAGCTGCGGAGCGCTGTaGGATGGGGGCGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: KHPNFYRSIPKQCARHPGSCGAL*DGGVFW
Trigger: CCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCT...CCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PKFLPFHTQAMCTSPRVMGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...CATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTT +
Preference number: 4 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPVFPKR*RLPAGV
Trigger: AACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAAC...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACTGGTGTGCTCACCACTaGAGAATGAGAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SCTTGGMRRWERQRGLFHWCAHH*RMRAAE
Trigger: CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCA...GTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCAAAGGGAGGCGGAGGTaGCGCCGAGCTCGCGTACAG +
Preference number: 4 (lower is better)
Translates to: TNCFSKEMEASSGSLLLTKGRRR*RRARVQ
Trigger: CTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTT...GGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGATCAGGTCGTATAAGTTaGGAGGGAGACGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LKMLAERVQGLCESNGPRSGRIS*EGDGER
Trigger: TCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGA...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGAGCATGAGCACTGTTTaGTCCGAGGGAGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: HCDLDWRTSLGITALWTQSMSTV*SEGGDR
Trigger: TCTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCT...CTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGCTTTCCCGTCGGTGCTaGGATCCCTGGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: KHPNFYRSIPKQCARHPGLSRRC*DPWPQA
Trigger: AGCCTGTGGCCAGGGATCCCAGCACCGACGGGAAAG...CCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR CCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAATGGTACAGCTGATGTaGAAAACAGGCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGAMVQLM*KTGRQL
Trigger: GAGCTGCCGGCCTGTTTTCCACATCAGCTGTACCAT...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637173.2
ENST00000650920.1
CDS-3UTR CCA 90 bp GCTGATGCGTTCCTTCCGCTCCGGCTTGCTCCGGCGACGCAGCGTGGAATCGGTCTCCTCACCGTCACTTaGCATTATCAGAGATTAAAT +
Preference number: 4 (lower is better)
Translates to: ADAFLPLRLAPATQRGIGLLTVT*HYQRLN
Trigger: ATTTAATCTCTGATAATGCCAAGTGACGGTGAGGAG...ACCGATTCCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGAACGCATCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR CCA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGTGGTTATTTTCCACTTaGGGAACCTATGAGCAACAC +
Preference number: 4 (lower is better)
Translates to: QALKGRRRWRRARVQHFEWLFST*GTYEQH
Trigger: GTGTTGCTCATAGGTTCCCCAAGTGGAAAATAACCA...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR CCA 90 bp TCAATTCATGGAGCACAGGGGAGCTGGGGTCAAAGCCTCGATCCAGGATCAGGAACCACAAAAGTGCCCTaGCTCCAGCTCACATTCCCC +
Preference number: 4 (lower is better)
Translates to: SIHGAQGSWGQSLDPGSGTTKVP*LQLTFP
Trigger: GGGGAATGTGAGCTGGAGCCAGGGCACTTTTGTGGT...TCCTGATCCTGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCCATGAATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637464.2
3UTR CAA 72 bp TCTTCGACAAACAAGGTCCTGAAGCATGAGCACTGTTaGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SSTNKVLKHEHC*VRGRGQNKQRE
Trigger: CTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR CAA 72 bp TCTGCGATGAACCACTGCAAAAGCTTTCTCCTTCCGTaGCCCAAAGGAAAGCCAGACTGGAGCCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SAMNHCKSFLLP*PKGKPDWSPLD
Trigger: GTCCAGGGGGCTCCAGTCTGGCTTTCCTTTGGGCAACGGAAGGAGAAAGCTTTTGCAGTGGTTCATCGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637173.2
CDS-3UTR TCA 90 bp GCCACTCGCCGCCACCCACTTTTAAAAATCCATTCATGTGGTGCCTTTCATCCACTCCGACAACAGCTTTaGGGCCAATGGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: ATRRHPLLKIHSCGAFHPLRQQL*GQWGPW
Trigger: CCATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAG...TGGATGAAAGGCACCACATGAATGGATTTTTAAAAGTGGGTGGCGGCGAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR TCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGATCCTCATGCTTAACTaGTCCACCACCAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: KALRREHHNAASREGGEQILMLN*STTSTF
Trigger: GAAGGTGCTGGTGGTGGATCAGTTAAGCATGAGGAT...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTTTATGCCCTCGGTCATaGTGTCTGTCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSLCPRS*CLSSCS
Trigger: GCTGCAAGATGACAGACATCATGACCGAGGGCATAA...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTCTTTCAGAGACCGGGTaGCTTCCTGGGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: SVLRKSGRISWEGDGERSLSETG*LPGTPL
Trigger: CAGAGGTGTCCCAGGAAGTCACCCGGTCTCTGAAAG...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGGGGTGGAGTACTTGCTaGGCTCTTTCTGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: GMRRWERQRGLFHLGPPEGWSTC*ALSGTE
Trigger: CTCAGTACCAGAAAGAGCTCAGCAAGTACTCCACCC...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGGGTGGAGTACTTGCTaGGCTCTTTCTGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: HCDLDWRTSLGITALWTQGWSTC*ALSGTE
Trigger: CTCAGTACCAGAAAGAGCTCAGCAAGTACTCCACCC...CTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCGGTAGGTCTGCTCGCTaGTGCGTTCCTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: RRPFILTVQKFLLLCTNCGRSAR*CVPSAP
Trigger: CGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACC...GCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCGGTAGGTCTGCTCGCTaGTGCGTTCCTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: TNCFSKEMEASSGSLLLTGRSAR*CVPSAP
Trigger: CGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACC...GGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTGGTAGGTCTGCTCGCTaGTGCGTTCCTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLGRSAR*CVPSAP
Trigger: CGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACC...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGAGGTAGGTCTGCTCGCTaGTGCGTTCCTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGGRSAR*CVPSAP
Trigger: CGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACC...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp ACGCCCGGCGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTGTGGGAGTAAGAATGTaGGTAGAACCTATCAGCACC +
Preference number: 4 (lower is better)
Translates to: TPGAGACGSVLRKSGRISVGVRM*VEPIST
Trigger: GGTGCTGATAGGTTCTACTCACATTCTTACTCCCAC...ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR TCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGCAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRQTQRN*GGRWWE
Trigger: TTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTG...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAERRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAGCAGGCACTGAGGGGTAGGGACTGGAATGAAGATAGCAGATTAGTCCTCAGTGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 4 (lower is better)
Translates to: EQALRGRDWNEDSRLVLSDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...ACTGAGGACTAATCTGCTATCTTCATTCCAGTCCCTACCCCTCAGTGCCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAACCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: RREHHNAASREGGEQALKPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...TTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACAATGAGCTGTTGGGATaGTGCCTGGGGACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSYQHNELLG*CLGTEG
Trigger: CCCTTCTGTCCCCAGGCATCATCCCAACAGCTCATT...GTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISVLVHS*PLNEGG
Trigger: TCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAAC...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGGAGAATGAGAGCTGCTaGGTCTTGAGGATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: GMRRWERQRGLFHLGPPEENESC*VLRMAR
Trigger: TCTCGCCATCCTCAAGACTCAGCAGCTCTCATTCTC...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTAGACGGGGAGAGATCTaGCGACTAATCTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: AIALCSGASRTHLFWSIPRRGEI*RLISVQ
Trigger: TTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCT...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTAGACGGGGAGAGATCTaGCGACTAATCTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPRRGEI*RLISVQ
Trigger: TTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCT...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACAGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCGACAAACAAGGTCCTaGAGCATGAGCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: HSCTTGGMRRWERQRGLFRQTRS*SMSTVW
Trigger: CCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCG...GAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGAGAATGGTACAGAGATaGTATATGTTTGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: TDAKELRRAVVGSCGALWRMVQR*YMFVLQ
Trigger: CTGAAGCACAAACATATATCATCTCTGTACCATTCT...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CCAGGCCAGCTCCTCACTTGGGGGACACACGGGAGGCCACTCCAGCAGACTGGTTTCATACGGGAGAAATaGAATATTGATTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: PGQLLTWGTHGRPLQQTGFIREK*NIDFRQ
Trigger: CTGACGGAAATCAATATTGCATTTCTCCCGTATGAA...ACCAGTCTGCTGGAGTGGCCTCCCGTGTGTCCCCCAAGTGAGGAGCTGGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR GCA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGGRDLL*QALQYR
Trigger: CCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACC...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp TGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: WLSLHCWSLILKRYPRGLGRDLL*QALQYR
Trigger: CCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACC...GAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGCAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRQRVAI*SARRSS
Trigger: ACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTG...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: WLSLHCWSLILKRYPRGLQRVAI*SARRSS
Trigger: ACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTG...GAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp CGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACACACCTCCTTCACCCGTaGCTCCCCGATGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: RPFILTVQKFLLLCTNCTHLLHP*LPDAAG
Trigger: ACCAGCGGCATCGGGGAGGCACGGGTGAAGGAGGTG...TGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGCACCTCCTTCACCCGTaGCTCCCCGATGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: KNTQISTVPYPSNVHVTQHLLHP*LPDAAG
Trigger: ACCAGCGGCATCGGGGAGGCACGGGTGAAGGAGGTG...CTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GAGCAGGCACTGAGGGGTAGGGACTGGAATGAAGATAGCAGATTAGTCCTCAGTTTCCTGGGACACCTCTaGGATGTGCTTGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: EQALRGRDWNEDSRLVLSFLGHL*DVLVAQ
Trigger: CTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAA...ACTGAGGACTAATCTGCTATCTTCATTCCAGTCCCTACCCCTCAGTGCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGCTCCCTCAGCATCTGTaGCCATGGCCAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRLPQHL*PWPGPA
Trigger: AGCAGGACCTGGCCATGGGCACAGATGCTGAGGGAG...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTACTCCCTCAGCATCTGTaGCCATGGCCAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLLPQHL*PWPGPA
Trigger: AGCAGGACCTGGCCATGGGCACAGATGCTGAGGGAG...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp TGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCTCCCTCAGCATCTGTaGCCATGGCCAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: WLSLHCWSLILKRYPRGLLPQHL*PWPGPA
Trigger: AGCAGGACCTGGCCATGGGCACAGATGCTGAGGGAG...GAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGACATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 4 (lower is better)
Translates to: LKMLAERVQGLCESNGPRHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGGCCTCCACCCACAGCTaGACTACCGGGGGTATGAGA +
Preference number: 4 (lower is better)
Translates to: PKFLPFHTQAMCTSPRVMASTHS*TTGGMR
Trigger: TCTCATACCCCCGGTAGTGCAGCTGTGGGTGGAGGC...CATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTGCTGGCCTGACTTCGTaGAGACACCCCAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RMARQPSCICCFSFCFRAAGLTS*RHPSLH
Trigger: GTGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGC...AGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGCTGACTGAAGATGCTTaGCGAGAGGGTACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: HCDLDWRTSLGITALWTQLTEDA*REGTGS
Trigger: AGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAG...CTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCGCGAGACAGCCTTCCTaGATTTGCTGCTTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: LAERVQGLCESNGPRTFSARQPS*ICCFSF
Trigger: GAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGC...GGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAAGCAGCACAAATGGTGTaGTCACCACTGGAGAATGAG +
Preference number: 4 (lower is better)
Translates to: RREHHNAASREGGEQALKAAQMV*SPLENE
Trigger: CTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGC...TTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTAAGAGAACACCACAATaGAGCGAGCAGAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGKRTPQ*SEQRGR
Trigger: CCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTT...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATCTTAAATAACGGGGACGCCCGGCGCAGGTaGCTGCGGTTCCGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: QCARHPGLCTRSQILNNGDARRR*LRFRPK
Trigger: CTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGTC...CCCGTTATTTAAGATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CCTTTCATCCAAACCCATAAACAACCATTTCCTCCCTGCCACCGTGGTCTGAGCCAACCATTTCCTCCCTaGCACCGTGGTCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PFIQTHKQPFPPCHRGLSQPFPP*HRGLSS
Trigger: GGAGCTCAGACCACGGTGGCAGGGAGGAAATGGTTG...GCTCAGACCACGGTGGCAGGGAGGAAATGGTTGTTTATGGGTTTGGATGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR GCA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGGTCCAGAAGACTCCATaGCACAGCCGGAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRVQKTP*HSRRWS
Trigger: CGACCACCTCCGGCTGTGGCATGGAGTCTTCTGGAC...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637173.2
CDS-3UTR CCA 90 bp TCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAGGCCAATGGGGGCCATaGCGCTGCGCGAGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: SQILNNGEKASIHPNSPEGQWGP*RCASLP
Trigger: CGGGAGACTCGCGCAGCGCCATGGCCCCCATTGGCC...TTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCACTGATGAGAGAGTaGACGGACTTCTCGGATGGA +
Preference number: 4 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPSLMRE*TDFSDG
Trigger: TCCATCCGAGAAGTCCGTCCACTCTCTCATCAGTGA...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACGCCCTCCCCCATTGTTaGATCATCAGCTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: SCTTGGMRRWERQRGLFHALPHC*IISFIG
Trigger: GCCTATAAAGCTGATGATCCAACAATGGGGGAGGGC...GTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCGGAGCGTGCCTTGTCTaGGCCCTCCCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: TNCFSKEMEASSGSLLLTGACLV*ALPHCW
Trigger: CCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCC...GGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCGGAGCGTGCCTTGTCTaGGCCCTCCCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFGACLV*ALPHCW
Trigger: CCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCC...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGAGGAGCGTGCCTTGTCTaGGCCCTCCCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGGACLV*ALPHCW
Trigger: CCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCC...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp AACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGTCCAGGATCAGGAGCTaGGAGCGTGCCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: NGEKASIHPNSPEISPAVSRIRS*ERALSG
Trigger: CCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGA...CACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTTCCAGGATCAGGAGCTaGGAGCGTGCCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPSRIRS*ERALSG
Trigger: CCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGA...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp ATTCTTTTCTCCCCAGGCTTGGCTTGGACTCATCGTCAACAGCAGCAGCATCATGGAGCACAGGGGAGCTaGGGTCAAAGCCTCGATCCA +
Preference number: 4 (lower is better)
Translates to: ILFSPGLAWTHRQQQQHHGAQGS*GQSLDP
Trigger: TGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCC...ATGATGCTGCTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTGGAGCACAGGGGAGCTaGGGTCAAAGCCTCGATCCA +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPGAQGS*GQSLDP
Trigger: TGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCC...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCTCCCCGATGCCGCTaGTCTCATACTTGTATACAT +
Preference number: 4 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSPPRCR*SHTCIH
Trigger: ATGTATACAAGTATGAGACCAGCGGCATCGGGGAGG...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGACCTCCCCGATGCCGCTaGTCTCATACTTGTATACAT +
Preference number: 4 (lower is better)
Translates to: LKMLAERVQGLCESNGPRPPRCR*SHTCIH
Trigger: ATGTATACAAGTATGAGACCAGCGGCATCGGGGAGG...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTGACCGGGTGACTTCCTaGGACACCTCTGCGATGTGC +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPDRVTS*DTSAMC
Trigger: GCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACAGGTCCCGCATGGTaGTCTTCTCTCCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: LKMLAERVQGLCESNGPRTGPAW*SSLQYS
Trigger: TGAATACTGGAGAGAAGACCACCATGCGGGACCTGT...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTACAGGTCCCGCATGGTaGTCTTCTCTCCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: AIALCSGASRTHLFWSIPTGPAW*SSLQYS
Trigger: TGAATACTGGAGAGAAGACCACCATGCGGGACCTGT...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTACAGGTCCCGCATGGTaGTCTTCTCTCCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSTGPAW*SSLQYS
Trigger: TGAATACTGGAGAGAAGACCACCATGCGGGACCTGT...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCACAGGTCCCGCATGGTaGTCTTCTCTCCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: MLAERVQGLCESNGPRTFTGPAW*SSLQYS
Trigger: TGAATACTGGAGAGAAGACCACCATGCGGGACCTGT...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGGGGGACAGGTCCCGCATaGTGGTCTTCTCTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: LITRKLRLGSGCPPHSFWGTGPA*WSSLQY
Trigger: ATACTGGAGAGAAGACCACCATGCGGGACCTGTCCC...CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp CAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGGCACTGTATCTTCTTCAGCATCTaGGACAGGTCCCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: QRDGGFQREFASHLSGHCIFFSI*DRSRMV
Trigger: CACCATGCGGGACCTGTCCCAGATGCTGAAGAAGAT...ACAGTGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCGGTATCTGGGCGTGCTaGATCAGTTTGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSGIWAC*ISLFRF
Trigger: AAACCTGAACAAACTGATCCAGCACGCCCAGATACC...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTTCCTCCGGGGGTATCTaGGCGTGCTGGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRASSGGI*ACWISL
Trigger: CAAACTGATCCAGCACGCCCAGATACCCCCGGAGGA...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGACTGCGGTACTCGCCTaGGGCCTTGTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: PNHKKTALREWLPSAFLLTAVLA*GLVLMP
Trigger: TGGCATAAGAACAAGGCCCCAGGCGAGTACCGCAGT...CAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp GCTGTGAGGGCAGCACTGGACACATTTTCAATCGGTGTTGAGAACTGCAAGCATCCTCCCACTTTCCGTTaGCCTGGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: AVRAALDTFSIGVENCKHPPTFR*PGSPRR
Trigger: CCTACGAGGTGACCCAGGCCAACGGAAAGTGGGAGG...ATGCTTGCAGTTCTCAACACCGATTGAAAATGTGTCCAGTGCTGCCCTCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494254.3
CDS-3UTR CCA 90 bp AAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGCCTCCCACTTTCCGTTaGCCTGGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: KHPNFYRSIPKQCARHPGPPTFR*PGSPRR
Trigger: CCTACGAGGTGACCCAGGCCAACGGAAAGTGGGAGG...CCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PEPICSGPFLTLERRRTRVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGGCACTGTGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: QRDGGFQREFASHLSGHCVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...ACAGTGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGAGCTGCGGAGCGCTGTaGGATGGGGGCGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLSCGAL*DGGVFW
Trigger: CCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCT...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISGGMRR*ERQRGL
Trigger: CAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCC...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTTGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: SVLRKSGRISWEGDGERSCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CVQQFLWGEDVCGSLFLWGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...CCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR CCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GGGAGGGAGACGGGGAGAGATCTGACGACTAATCTCAGTGCAAGGGGAGATTTCCACTGTGACTTAGACTaGAGGACTTCCCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: GRETGRDLTTNLSARGDFHCDLD*RTSLGI
Trigger: GATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG...GAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACACTGTGACTTAGACTaGAGGACTTCCCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: TTGGMRRWERQRGLFHLGHCDLD*RTSLGI
Trigger: GATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG...TCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTCACTGTGACTTAGACTaGAGGACTTCCCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: PPEPICSGPFLTLERRRTHCDLD*RTSLGI
Trigger: GATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 4 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGTGGTGTGCTCACCACTaGAGAATGAGAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GMRRWERQRGLFHLGPPEWCAHH*RMRAAE
Trigger: CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCA...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTTGGTGTGCTCACCACTaGAGAATGAGAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PPEPICSGPFLTLERRRTWCAHH*RMRAAE
Trigger: CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCA...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACAGCAGCAGCACAAATaGTGTGCTCACCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: TTGGMRRWERQRGLFHLGQQQHK*CAHHWR
Trigger: TCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTG...TCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCACAAGTAATACACACATaGCCTGCAGGAGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGAQVIHT*PAGGQG
Trigger: CCCTTGACCTCCTGCAGGCCATGTGTGTATTACTTG...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTCCCACGGAAGGAGCTTaGAGGCGAGATCTCTTACTA +
Preference number: 4 (lower is better)
Translates to: PPEPICSGPFLTLERRRTPTEGA*RRDLLL
Trigger: TAGTAAGAGATCTCGCCTCCAAGCTCCTTCCGTGGG...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR CCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACCAGCATCTGTGCCCATaGCCAGGTCCATGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LRKSGRISWEGDGERSDDQHLCP*PGPWTV
Trigger: CACTGTCCATGGACCTGGCCATGGGCACAGATGCTG...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636509.2
CDS-3UTR TCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACCTGGACAAGAGTCAGTaGAGAAGACGTGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LRKSGRISWEGDGERSDDLDKSQ*RRRVQP
Trigger: GGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAG...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CGCATTCCTTCTGGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTCTTTCAGAGACCGGGTaGCTTCCTGGGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: RIPSGRQMQFVSLPTFCILSETG*LPGTPL
Trigger: CAGAGGTGTCCCAGGAAGTCACCCGGTCTCTGAAAG...AATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAGGAATGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp TGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCTTTCAGAGACCGGGTaGCTTCCTGGGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: WLSLHCWSLILKRYPRGLLSETG*LPGTPL
Trigger: CAGAGGTGTCCCAGGAAGTCACCCGGTCTCTGAAAG...GAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp AAGGAAAGCCAGACTGGAGCCCCCTGGACACCGGGAAGGGGTGCTGATTTCTTTAGCTCTTTCTGGTACTaGGGCATCTTCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: KESQTGAPWTPGRGADFFSSFWY*GIFFSI
Trigger: GATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCT...AAAGAAATCAGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACGGGTGGAGTACTTGCTaGGCTCTTTCTGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSYQHGWSTC*ALSGTE
Trigger: CTCAGTACCAGAAAGAGCTCAGCAAGTACTCCACCC...GTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCTCAGGTTTTCCTCCGTaGTGCCATTCTTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPSGFPP*CHSSKR
Trigger: TCTTTTTGAAGAATGGCATCACGGAGGAAAACCTGA...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCTTTGGAAAGAGTCAGCAGAGTCCAAGGAATAGACCTGGGATTCATACGGGAGATGGGCACGCCGAGGTaGGCCATGTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: ALERVSRVQGIDLGFIREMGTPR*AMLVMI
Trigger: GATCATCACCAACATGGCTCACCTCGGCGTGCCCAT...CTCCCGTATGAATCCCAGGTCTATTCCTTGGACTCTGCTGACTCTTTCCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGCAGCGTGGAATCGGTaGCGATGGGCACGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRAAWNR*RWARRG
Trigger: ACCTCGGCGTGCCCATCGTCACCGATTCCACGCTGC...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTGGTAGGTCTGCTCGCTaGTGCGTTCCTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: GRQMQFVSLPTFCIYENSGRSAR*CVPSAP
Trigger: CGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACC...ACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTAAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLNRSPP*ELVGLL
Trigger: GAGCAGACCTACCAGCTCTCACGGTGGACTCCGATT...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp TGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: WLSLHCWSLILKRYPRGLNRSPP*ELVGLL
Trigger: GAGCAGACCTACCAGCTCTCACGGTGGACTCCGATT...GAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 4 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTCCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRAPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: LAERVQGLCESNGPRTFSKLRII*LKMLAE
Trigger: CTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTT...GGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAGCAGGCACTGAGGGGTAGGGACTGGAATGAAGATAGCAGATTAGTCCTCAGTAGAGCTGCTGAGTCTTaGGGATGGCGAGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: EQALRGRDWNEDSRLVLSRAAES*GWRDSL
Trigger: AAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCT...ACTGAGGACTAATCTGCTATCTTCATTCCAGTCCCTACCCCTCAGTGCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAAGACGGGGAGAGATCTaGCGACTAATCTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LRFRPKEIRSYKLGGRRGRRGEI*RLISVQ
Trigger: TTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCT...TCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTCGACAAACAAGGTCCTaGAGCATGAGCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: PPEPICSGPFLTLERRRTRQTRS*SMSTVW
Trigger: CCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCG...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTACACAAGCAGCTTCTaGTGTCACCTAGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPYTSSF*CHLAKV
Trigger: AACCTTGGCTAGGTGACATCAGAAGCTGCTTGTGTA...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637953.1
CDS-3UTR TCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCGCAGTTTCTGTGGGGTaGGGATGTGTGTGGATCCTT +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISAVSVG*GCVWIL
Trigger: AAGGATCCACACACATCCTCACCCCACAGAAACTGC...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637953.1
CDS-3UTR TCA 90 bp ACGCCCGGCGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTGTCATGCACTGCTGGTaGGAATGTAAAATGGTACAG +
Preference number: 4 (lower is better)
Translates to: TPGAGACGSVLRKSGRISVMHCW*ECKMVQ
Trigger: CTGTACCATTTTACATTCTCACCAGCAGTGCATGAC...ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637173.2
ENST00000650920.1
CDS-3UTR GCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCTGGGGGCCATGGCGCTaGGCGAGTCTCCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RLVLSVKYSKNTDISMILWGPWR*ASLPAP
Trigger: CGGAGCCGGGAGACTCGCGCAGCGCCATGGCCCCCA...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGTTCTTTATCACATCATaGATAATCTTCTCTCCGACA +
Preference number: 4 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKFFITS*IIFSPT
Trigger: TGTCGGAGAGAAGATTATGCATGATGTGATAAAGAA...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637464.2
ENST00000637953.1
CDS-3UTR GCA 90 bp CACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGAGTGAAGAAGACGTGTaGAGCCCGGTATTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: HYRGYETLGKAKRSVPPWSEEDV*SPVFSS
Trigger: ACTGCTAAATACCGGGCTGCACACGTCTTCTTCACT...CCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GGGAGCGTGCCTTGTCTGGGCCCTCCCCCATTGTTGGATCATCAGCTTTATAGGAGTGAAGAAGACGTGTaGAGCCCGGTATTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GSVPCLGPPPLLDHQLYRSEEDV*SPVFSS
Trigger: ACTGCTAAATACCGGGCTGCACACGTCTTCTTCACT...CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR GCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAAGTGAAGAAGACGTGTaGAGCCCGGTATTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGASEEDV*SPVFSS
Trigger: ACTGCTAAATACCGGGCTGCACACGTCTTCTTCACT...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCCATTCATACGGGAGAAATaGAATATTGATTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: TGCGGGRWPDFVQTPQPPFIREK*NIDFRQ
Trigger: CTGACGGAAATCAATATTGCATTTCTCCCGTATGAA...TGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ATTTATTCTTTTCTCCCCAGGCTTGGCTTGGACTCATCGTCAACAGCAGCAGCAGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: IYSFLPRLGLDSSSTAAAGRDLL*QALQYR
Trigger: CCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACC...TGCTGCTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAGAATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp AGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTCAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RMARQPSCICCFSFCFRAQRVAI*SARRSS
Trigger: ACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTG...AGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: CVQQFLWGEDVCGSLFLWQRVAI*SARRSS
Trigger: ACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTG...CCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp GCCAGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACACAGGAGCTGGGAGCGTaGCTTGTCTGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ASHYPDFGICHSHACFHTQELGA*LVWALP
Trigger: GGGGAGGGCCCAGACAAGGCACGCTCCCAGCTCCTG...TGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTCCCGTGCCTCCCCGATaGCGCTGGTCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLPVPPR*RWSHTC
Trigger: ACAAGTATGAGACCAGCGGCATCGGGGAGGCACGGG...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp CCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGGTGCTTGTGGCGCAGTaGTATCCACAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: PKFLPFHTQAMCTSPRVMVLVAQ*YPQVVV
Trigger: GACGACGACCTGTGGATAGCACTGCGCCACAAGCAC...CATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTAGTGCTTGTGGCGCAGTaGTATCCACAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLVLVAQ*YPQVVV
Trigger: GACGACGACCTGTGGATAGCACTGCGCCACAAGCAC...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTGTGCTTGTGGCGCAGTaGTATCCACAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPVLVAQ*YPQVVV
Trigger: GACGACGACCTGTGGATAGCACTGCGCCACAAGCAC...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCTTCCTGGGACACCTCTaGGATGTGCTTGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVFLGHL*DVLVAQ
Trigger: CTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAA...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTATTCCTGGGACACCTCTaGGATGTGCTTGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLFLGHL*DVLVAQ
Trigger: CTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAA...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp CCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTTCCTGGGACACCTCTaGGATGTGCTTGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PKFLPFHTQAMCTSPRVMFLGHL*DVLVAQ
Trigger: CTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAA...CATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: ALRREHHNAASREGGEQARVCLR*LGNASY
Trigger: GTATGAAGCATTACCAAGGCACCGTAGACAAACTCT...AGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCCTCCCTCAGCATCTGTaGCCATGGCCAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFLPQHL*PWPGPA
Trigger: AGCAGGACCTGGCCATGGGCACAGATGCTGAGGGAG...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRAGGIWA*WISLFR
Trigger: CCTGAACAAACTGATCCAGCACGCCCAGATACCCCC...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGCCTCCACCCACAGCTaGACTACCGGGGGTATGAGA +
Preference number: 4 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLASTHS*TTGGMR
Trigger: TCTCATACCCCCGGTAGTGCAGCTGTGGGTGGAGGC...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAACTGACTGAAGATGCTTaGCGAGAGGGTACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: EPICSGPFLTLERRRTRELTEDA*REGTGS
Trigger: AGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAG...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAGGAAAGCCAGACTGGAGCCCCCTGGACACCGGGAAGGGGTGCTGATTTCTTTGCGAGACAGCCTTCCTaGATTTGCTGCTTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: KESQTGAPWTPGRGADFFARQPS*ICCFSF
Trigger: GAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGC...AAAGAAATCAGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGGCAGCACAAATGGTGTaGTCACCACTGGAGAATGAG +
Preference number: 4 (lower is better)
Translates to: GMRRWERQRGLFHLGPPEAAQMV*SPLENE
Trigger: CTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGC...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GGGAGGGAGACGGGGAGAGATCTGACGACTAATCTCAGTGCAAGGGGAGATTTCGCAGCACAAATGGTGTaGTCACCACTGGAGAATGAG +
Preference number: 4 (lower is better)
Translates to: GRETGRDLTTNLSARGDFAAQMV*SPLENE
Trigger: CTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGC...GAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCTCCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGAATACACACATGGCCTaGAGGAGGTCAAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: NGEKASIHPNSPEISPAVNTHMA*RRSRAA
Trigger: CGCCGCCCTTGACCTCCTGCAGGCCATGTGTGTATT...CACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCAATACACACATGGCCTaGAGGAGGTCAAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGNTHMA*RRSRAA
Trigger: CGCCGCCCTTGACCTCCTGCAGGCCATGTGTGTATT...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR GCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACAAGAGAACACCACAATaGAGCGAGCAGAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: LRKSGRISWEGDGERSDDKRTPQ*SEQRGR
Trigger: CCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTT...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACGGCCAATGGGGGCCATaGCGCTGCGCGAGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNGQWGP*RCASLP
Trigger: CGGGAGACTCGCGCAGCGCCATGGCCCCCATTGGCC...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGTCACTGATGAGAGAGTaGACGGACTTCTCGGATGGA +
Preference number: 4 (lower is better)
Translates to: HCDLDWRTSLGITALWTQSLMRE*TDFSDG
Trigger: TCCATCCGAGAAGTCCGTCCACTCTCTCATCAGTGA...CTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGATCACTGATGAGAGAGTaGACGGACTTCTCGGATGGA +
Preference number: 4 (lower is better)
Translates to: TTGGMRRWERQRGLFHLGSLMRE*TDFSDG
Trigger: TCCATCCGAGAAGTCCGTCCACTCTCTCATCAGTGA...TCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGATCACTGATGAGAGAGTaGACGGACTTCTCGGATGGA +
Preference number: 4 (lower is better)
Translates to: AGACGSVLRKSGRISWEGSLMRE*TDFSDG
Trigger: TCCATCCGAGAAGTCCGTCCACTCTCTCATCAGTGA...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRAGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: QMYLITRKLRLGSGCPPHGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...ATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: SVLRKSGRISWEGDGERSGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGAGCGTGCCTTGTCTaGGCCCTCCCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: KNTQISTVPYPSNVHVTQGACLV*ALPHCW
Trigger: CCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCC...CTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ATTTATTCTTTTCTCCCCAGGCTTGGCTTGGACTCATCGTCAACAGCAGCAGCATCCAGGATCAGGAGCTaGGAGCGTGCCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: IYSFLPRLGLDSSSTAAASRIRS*ERALSG
Trigger: CCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGA...TGCTGCTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAGAATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGTCCAGGATCAGGAGCTaGGAGCGTGCCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CVQQFLWGEDVCGSLFLWSRIRS*ERALSG
Trigger: CCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGA...CCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGTCCAGGATCAGGAGCTaGGAGCGTGCCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLSRIRS*ERALSG
Trigger: CCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGA...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCGGAGCACAGGGGAGCTaGGGTCAAAGCCTCGATCCA +
Preference number: 4 (lower is better)
Translates to: TNCFSKEMEASSGSLLLTGAQGS*GQSLDP
Trigger: TGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCC...GGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTGGAGCACAGGGGAGCTaGGGTCAAAGCCTCGATCCA +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLGAQGS*GQSLDP
Trigger: TGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCC...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGACCGGGTGACTTCCTaGGACACCTCTGCGATGTGC +
Preference number: 4 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLDRVTS*DTSAMC
Trigger: GCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTGACCGGGTGACTTCCTaGGACACCTCTGCGATGTGC +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLDRVTS*DTSAMC
Trigger: GCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTACAGGTCCCGCATGGTaGTCTTCTCTCCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: PPEPICSGPFLTLERRRTTGPAW*SSLQYS
Trigger: TGAATACTGGAGAGAAGACCACCATGCGGGACCTGT...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCGGGACAGGTCCCGCATaGTGGTCTTCTCTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIGTGPA*WSSLQY
Trigger: ATACTGGAGAGAAGACCACCATGCGGGACCTGTCCC...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAATCTTCTTCAGCATCTaGGACAGGTCCCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: EPICSGPFLTLERRRTREIFFSI*DRSRMV
Trigger: CACCATGCGGGACCTGTCCCAGATGCTGAAGAAGAT...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTCAGCATCTGTGCCCATaGCCAGGTCCTGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLQHLCP*PGPAPL
Trigger: GAGTGGAGCAGGACCTGGCCATGGGCACAGATGCTG...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACAGCATCTGTGCCCATaGCCAGGTCCTGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGQHLCP*PGPAPL
Trigger: GAGTGGAGCAGGACCTGGCCATGGGCACAGATGCTG...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp CACAGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCGGTATCTGGGCGTGCTaGATCAGTTTGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: HSCTTGGMRRWERQRGLFGIWAC*ISLFRF
Trigger: AAACCTGAACAAACTGATCCAGCACGCCCAGATACC...GAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTACTGCGGTACTCGCCTaGGGCCTTGTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: SVLRKSGRISWEGDGERSTAVLA*GLVLMP
Trigger: TGGCATAAGAACAAGGCCCCAGGCGAGTACCGCAGT...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCCCTCCCACTTTCCGTTaGCCTGGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: RRPFILTVQKFLLLCTNCPPTFR*PGSPRR
Trigger: CCTACGAGGTGACCCAGGCCAACGGAAAGTGGGAGG...GCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTCCTCCCACTTTCCGTTaGCCTGGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLPPTFR*PGSPRR
Trigger: CCTACGAGGTGACCCAGGCCAACGGAAAGTGGGAGG...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp AAAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGCAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 4 (lower is better)
Translates to: KNTQISTVPYPSNVHVTQQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...CTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: FHTQAMCTSPRVMYKVTNGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAACACTGTGACTTAGACTaGAGGACTTCCCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: EPICSGPFLTLERRRTREHCDLD*RTSLGI
Trigger: GATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GGGCACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACAGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTT +
Preference number: 4 (lower is better)
Translates to: GHCDLDWRTSLGITALWTVFPKR*RLPAGV
Trigger: AACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAAC...TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 4 (lower is better)
Translates to: MARQPSCICCFSFCFRAKGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...CTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTTGGGATGATGCCTaGGGACAGAAGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TNCFSKEMEASSGSLLLTCWDDA*GQKGLG
Trigger: GCCCAGGCCCTTCTGTCCCCAGGCATCATCCCAACA...GGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAAAAGGGAGGCGGAGGTaGCGCCGAGCTCGCGTACAG +
Preference number: 4 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQKGRRR*RRARVQ
Trigger: CTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTT...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTCAGGTCGTATAAGTTaGGAGGGAGACGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISSGRIS*EGDGER
Trigger: TCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGA...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GGATGCCGTTTTGCAAATGTCACCCACCATCAGCCCTCGCTCCGCTGCGGCCGCTCTTATTTAGCACTGTaGATGCCGTTTTGCAAATGT +
Preference number: 4 (lower is better)
Translates to: GCRFANVTHHQPSLRCGRSYLAL*MPFCKC
Trigger: ACATTTGCAAAACGGCATCCACAGTGCTAAATAAGA...GCGGCCGCAGCGGAGCGAGGGCTGATGGTGGGTGACATTTGCAAAACGGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR CCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTCAGCCCCCATCTCCTaGGCACTCACCGTACTCAGG +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLSAPIS*ALTVLR
Trigger: CCTGAGTACGGTGAGTGCCCAGGAGATGGGGGCTGA...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637521.2
CDS-3UTR CCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGATGGTACAGCTGATGTaGAAAACAGGCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAEMVQLM*KTGRQL
Trigger: GAGCTGCCGGCCTGTTTTCCACATCAGCTGTACCAT...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637173.2
ENST00000650920.1
CDS-3UTR TCA 90 bp GCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTATTCCCCCTTCTTCTTaGCCTTCTTTATCACATCAT +
Preference number: 4 (lower is better)
Translates to: ALRREHHNAASREGGEQAIPPSS*PSLSHH
Trigger: ATGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAAT...AGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGGATCCTCATGCTTAACTaGTCCACCACCAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: LITRKLRLGSGCPPHSFWILMLN*STTSTF
Trigger: GAAGGTGCTGGTGGTGGATCAGTTAAGCATGAGGAT...CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp GGTCCTGCTCCACTCGGCAGAGTTTGTCTACGGTGCCTTGGTAATGCTTCATACATCCTCATGCTTAACTaGTCCACCACCAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: GPAPLGRVCLRCLGNASYILMLN*STTSTF
Trigger: GAAGGTGCTGGTGGTGGATCAGTTAAGCATGAGGAT...GTATGAAGCATTACCAAGGCACCGTAGACAAACTCTGCCGAGTGGAGCAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGTTATGCCCTCGGTCATaGTGTCTGTCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAELCPRS*CLSSCS
Trigger: GCTGCAAGATGACAGACATCATGACCGAGGGCATAA...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACGCCCGGCGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTGCTCTCTGCGCTTATTaGTATCTTCCACAATCGTTA +
Preference number: 4 (lower is better)
Translates to: TPGAGACGSVLRKSGRISALCAY*YLPQSL
Trigger: TAACGATTGTGGAAGATATCAATAAGCGCAGAGAGC...ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637173.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGGCTTCAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCTGGACAAGAGTCAGTaGAGAAGACGTGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RLQMYLITRKLRLGSGCPLDKSQ*RRRVQP
Trigger: GGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAG...AGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTGAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTCTGGACAAGAGTCAGTaGAGAAGACGTGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPLDKSQ*RRRVQP
Trigger: GGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAG...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCTTGTCCTGGATTAGCTaGGCCAGCAGGGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGLSWIS*ASRALS
Trigger: GGACAATGCCCTGCTGGCTCAGCTAATCCAGGACAA...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTTTGTCCTGGATTAGCTaGGCCAGCAGGGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPLSWIS*ASRALS
Trigger: GGACAATGCCCTGCTGGCTCAGCTAATCCAGGACAA...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp TGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCTTTCAGAGACCGGGTaGCTTCCTGGGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: CVQQFLWGEDVCGSLFLWLSETG*LPGTPL
Trigger: CAGAGGTGTCCCAGGAAGTCACCCGGTCTCTGAAAG...CCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTTTTGTCATAAGTGCTaGCATTGGCATCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSFCHKC*HWHPAE
Trigger: TTCTGCTGGATGCCAATGTCAGCACTTATGACAAAA...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTAGATGTAGAGAAGGATaGTGCGGATTTTGTCATAAG +
Preference number: 4 (lower is better)
Translates to: ALRREHHNAASREGGEQARCREG*CGFCHK
Trigger: CTTATGACAAAATCCGCATCATCCTTCTCTACATCT...AGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTATGGGCACGCCGAGGTaGGCCATGTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLMGTPR*AMLVMI
Trigger: GATCATCACCAACATGGCTCACCTCGGCGTGCCCAT...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTATGGGCACGCCGAGGTaGGCCATGTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLMGTPR*AMLVMI
Trigger: GATCATCACCAACATGGCTCACCTCGGCGTGCCCAT...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTGCAGCGTGGAATCGGTaGCGATGGGCACGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFAAWNR*RWARRG
Trigger: ACCTCGGCGTGCCCATCGTCACCGATTCCACGCTGC...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: CVQQFLWGEDVCGSLFLWNRSPP*ELVGLL
Trigger: GAGCAGACCTACCAGCTCTCACGGTGGACTCCGATT...CCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp ATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: ITGRRRPFILTVQKFLLLNRSPP*ELVGLL
Trigger: GAGCAGACCTACCAGCTCTCACGGTGGACTCCGATT...CAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAACAGACGCAAAGGAACTaGGGCGGGCGGTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQQTQRN*GGRWWE
Trigger: TTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTG...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: ALRREHHNAASREGGEQACTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...AGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: NGEKASIHPNSPEISPAVPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...CACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCCCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACCCACCTTGGACCTCCTaGGATATCCTGATTGTCACC +
Preference number: 4 (lower is better)
Translates to: LRKSGRISWEGDGERSDDPPWTS*DILIVT
Trigger: GGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGG...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGGGTACAGGGTCTGTGTaGGTCCAACGGGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: ITGRRRPFILTVQKFLLLGTGSV*VQRAKN
Trigger: GTTCTTGGCCCGTTGGACTCACACAGACCCTGTACC...CAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGGTACAGGGTCTGTGTaGGTCCAACGGGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRGTGSV*VQRAKN
Trigger: GTTCTTGGCCCGTTGGACTCACACAGACCCTGTACC...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAAAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: RREHHNAASREGGEQALKKLRII*LKMLAE
Trigger: CTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTT...TTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: KALRREHHNAASREGGEQKLRII*LKMLAE
Trigger: CTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTT...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTAAACACGATGATGTATaGCCCCACACAACACAAGGT +
Preference number: 4 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSKHDDV*PHTTQG
Trigger: ACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTT...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTAAACACGATGATGTATaGCCCCACACAACACAAGGT +
Preference number: 4 (lower is better)
Translates to: AIALCSGASRTHLFWSIPKHDDV*PHTTQG
Trigger: ACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTT...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCCTCTTACAAACACGATaGTGTATGACCCCACACAAC +
Preference number: 4 (lower is better)
Translates to: MLAERVQGLCESNGPRTFLLQTR*CMTPHN
Trigger: GTTGTGTGGGGTCATACATCATCGTGTTTGTAAGAG...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGAGAGCTGCTGAGTCTTaGGGATGGCGAGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQRAAES*GWRDSL
Trigger: AAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCT...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTTCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 4 (lower is better)
Translates to: PPEPICSGPFLTLERRRTSRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAAGACGGGGAGAGATCTaGCGACTAATCTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: EPICSGPFLTLERRRTRERRGEI*RLISVQ
Trigger: TTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCT...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CCTTTCATCCAAACCCATAAACAACCATTTCCTCCCTGCCACCGTGGTCTGAGCTCCTCATCTCCCGAGTaGTTTCAGGGGTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: PFIQTHKQPFPPCHRGLSSSSPE*FQGFRI
Trigger: GATCCTGAACCCCTGAAATCACTCGGGAGATGAGGA...GCTCAGACCACGGTGGCAGGGAGGAAATGGTTGTTTATGGGTTTGGATGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR TCA 90 bp CTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGGCAAAAGCAGCAGCTCTaGGCTTCTACAGCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LITRKLRLGSGCPPHSFWQKQQL*ASTALC
Trigger: ACAAAGGGCTGTAGAAGCTCAGAGCTGCTGCTTTTG...CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp CCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGCAAAAGCAGCAGCTCTaGGCTTCTACAGCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PNHKKTALREWLPSAFLLQKQQL*ASTALC
Trigger: ACAAAGGGCTGTAGAAGCTCAGAGCTGCTGCTTTTG...CAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp AAAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: KNTQISTVPYPSNVHVTQGRDLL*QALQYR
Trigger: CCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACC...CTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGCCCGTGCCTCCCCGATaGCGCTGGTCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: MARQPSCICCFSFCFRAKPVPPR*RWSHTC
Trigger: ACAAGTATGAGACCAGCGGCATCGGGGAGGCACGGG...CTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTCCCGTGCCTCCCCGATaGCGCTGGTCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: SVSSSFCGVRMCVDLCFFPVPPR*RWSHTC
Trigger: ACAAGTATGAGACCAGCGGCATCGGGGAGGCACGGG...AAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCGTGCTTGTGGCGCAGTaGTATCCACAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFVLVAQ*YPQVVV
Trigger: GACGACGACCTGTGGATAGCACTGCGCCACAAGCAC...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp ATTCTTTTCTCCCCAGGCTTGGCTTGGACTCATCGTCAACAGCAGCAGCATCATGACACCTCTGCGATGTaGTTGTGGCGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: ILFSPGLAWTHRQQQQHHDTSAM*LWRSAI
Trigger: GATAGCACTGCGCCACAAGCACATCGCAGAGGTGTC...ATGATGCTGCTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp CGCATTCCTTCTGGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTGACACCTCTGCGATGTaGTTGTGGCGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: RIPSGRQMQFVSLPTFCIDTSAM*LWRSAI
Trigger: GATAGCACTGCGCCACAAGCACATCGCAGAGGTGTC...AATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAGGAATGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTGACACCTCTGCGATGTaGTTGTGGCGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPDTSAM*LWRSAI
Trigger: GATAGCACTGCGCCACAAGCACATCGCAGAGGTGTC...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTTCCTGGGACACCTCTaGGATGTGCTTGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLFLGHL*DVLVAQ
Trigger: CTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAA...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTCTCCCTCAGCATCTGTaGCCATGGCCAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GRQMQFVSLPTFCIYENSLPQHL*PWPGPA
Trigger: AGCAGGACCTGGCCATGGGCACAGATGCTGAGGGAG...ACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACGCGGTGGTGGGAAGCTaGGGAGCGCTGTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNAVVGS*GALWDG
Trigger: CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGC...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTTGCGGTGGTGGGAAGCTaGGGAGCGCTGTGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TDISMILNKDRNNPKQGFAVVGS*GALWDG
Trigger: CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGC...AAAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 4 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSSRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCACAGTCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 4 (lower is better)
Translates to: PRGYRVCVSPTGQEPSPQSRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...CTGTGGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCCTTCCAGCGGGAGTTTaGTTCTCACCTGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVLPAGV*FSPVRA
Trigger: TGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAG...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCCCTTCCTGCATTTGCTaGTTTAGTTTCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPPSCIC*FSFCFR
Trigger: TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGG...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTGCGAGACAGCCTTCCTaGATTTGCTGCTTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: PPEPICSGPFLTLERRRTARQPS*ICCFSF
Trigger: GAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGC...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATAGGCCAATGGGGGCCATaGCGCTGCGCGAGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: DSLPAFAALVSALELSFIGQWGP*RCASLP
Trigger: CGGGAGACTCGCGCAGCGCCATGGCCCCCATTGGCC...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTCACTGATGAGAGAGTaGACGGACTTCTCGGATGGA +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISSLMRE*TDFSDG
Trigger: TCCATCCGAGAAGTCCGTCCACTCTCTCATCAGTGA...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCATTAAACAGGGCATCTaGACAAGAGTCAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPIKQGI*TRVSEE
Trigger: TTCTTCACTGACTCTTGTCCAGATGCCCTGTTTAAT...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCTTTGGAAAGAGTCAGCAGAGTCCAAGGAATAGACCTGGGATTCATACGGGAGGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: ALERVSRVQGIDLGFIREGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...CTCCCGTATGAATCCCAGGTCTATTCCTTGGACTCTGCTGACTCTTTCCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR CCA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAGGAGCGTGCCTTGTCTaGGCCCTCCCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQGACLV*ALPHCW
Trigger: CCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCC...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TCATCATCATCATCATCATCATCATCATCAATGGCTGAGCCCTCACTGTGCTTCGGAGCGTGCCTTGTCTaGGCCCTCCCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSSMAEPSLCFGACLV*ALPHCW
Trigger: CCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCC...GAAGCACAGTGAGGGCTCAGCCATTGATGATGATGATGATGATGATGATGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp CGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATCCAGGATCAGGAGCTaGGAGCGTGCCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RPFILTVQKFLLLCTNCTSRIRS*ERALSG
Trigger: CCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGA...TGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAACCTCCCCGATGCCGCTaGTCTCATACTTGTATACAT +
Preference number: 4 (lower is better)
Translates to: EPICSGPFLTLERRRTREPPRCR*SHTCIH
Trigger: ATGTATACAAGTATGAGACCAGCGGCATCGGGGAGG...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTCTGCGATGTGCTTGTaGCGCAGTGCTATCCACAGG +
Preference number: 4 (lower is better)
Translates to: KHPNFYRSIPKQCARHPGSAMCL*RSAIHR
Trigger: CCTGTGGATAGCACTGCGCCACAAGCACATCGCAGA...CCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CGCATTCCTTCTGGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RIPSGRQMQFVSLPTFCISARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...AATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAGGAATGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp ATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGCAGCATCTGTGCCCATaGCCAGGTCCTGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: MARQPSCICCFSFCFRAKQHLCP*PGPAPL
Trigger: GAGTGGAGCAGGACCTGGCCATGGGCACAGATGCTG...CTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGGTATCTGGGCGTGCTaGATCAGTTTGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: AGACGSVLRKSGRISWEGGIWAC*ISLFRF
Trigger: AAACCTGAACAAACTGATCCAGCACGCCCAGATACC...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGAGGTATCTGGGCGTGCTaGATCAGTTTGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: TTGGMRRWERQRGLFHLGGIWAC*ISLFRF
Trigger: AAACCTGAACAAACTGATCCAGCACGCCCAGATACC...TCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTCCTCCGGGGGTATCTaGGCGTGCTGGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFSSGGI*ACWISL
Trigger: CAAACTGATCCAGCACGCCCAGATACCCCCGGAGGA...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCACTGCGGTACTCGCCTaGGGCCTTGTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGTAVLA*GLVLMP
Trigger: TGGCATAAGAACAAGGCCCCAGGCGAGTACCGCAGT...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTACTGCGGTACTCGCCTaGGGCCTTGTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPTAVLA*GLVLMP
Trigger: TGGCATAAGAACAAGGCCCCAGGCGAGTACCGCAGT...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: SVLRKSGRISWEGDGERSVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCCACTGTGACTTAGACTaGAGGACTTCCCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIHCDLD*RTSLGI
Trigger: GATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGTTGGGATGATGCCTaGGGACAGAAGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RPFILTVQKFLLLCTNCTCWDDA*GQKGLG
Trigger: GCCCAGGCCCTTCTGTCCCCAGGCATCATCCCAACA...TGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGGTGTGCTCACCACTaGAGAATGAGAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIWCAHH*RMRAAE
Trigger: CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCA...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCAGCATGAGCACTGTTTaGTCCGAGGGAGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGSMSTV*SEGGDR
Trigger: TCTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCT...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR CCA 90 bp TCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAACAGACTGGAGCCCCCTaGACACCGGGAAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SQILNNGEKASIHPNSPEQTGAP*TPGRGA
Trigger: AGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTG...TTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACAAAAGGAAAGCCAGACTaGAGCCCCCTGGACACCGGG +
Preference number: 4 (lower is better)
Translates to: RPFILTVQKFLLLCTNCTKGKPD*SPLDTG
Trigger: CCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTTT...TGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637173.2
ENST00000650920.1
CDS-3UTR CCA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTATCCCCAGGCTTGGCTTaGACTCATCGTCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLSPGLA*THRQQQ
Trigger: CTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGA...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTACCTCCGCATTCCTTCTaGGCGGCAGATGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLPPHSF*AADAVC
Trigger: ACAAACTGCATCTGCCGCCCAGAAGGAATGCGGAGG...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGCTAGACACTGCCAAGTaGTTTTCAAAGGGGCTACAC +
Preference number: 4 (lower is better)
Translates to: PEPICSGPFLTLERRRTRLDTAK*FSKGLH
Trigger: GTGTAGCCCCTTTGAAAACCACTTGGCAGTGTCTAG...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR TCA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTCTGCGCTTATTaGTATCTTCCACAATCGTTA +
Preference number: 4 (lower is better)
Translates to: KALRREHHNAASREGGEQALCAY*YLPQSL
Trigger: TAACGATTGTGGAAGATATCAATAAGCGCAGAGAGC...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637173.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTCTGGACAAGAGTCAGTaGAGAAGACGTGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLLDKSQ*RRRVQP
Trigger: GGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAG...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTGTCCTGGATTAGCTaGGCCAGCAGGGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFLSWIS*ASRALS
Trigger: GGACAATGCCCTGCTGGCTCAGCTAATCCAGGACAA...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp AAAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGCTTTCAGAGACCGGGTaGCTTCCTGGGACACCTCTG +
Preference number: 4 (lower is better)
Translates to: KNTQISTVPYPSNVHVTQLSETG*LPGTPL
Trigger: CAGAGGTGTCCCAGGAAGTCACCCGGTCTCTGAAAG...CTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTAGCTCTTTCTGGTACTaGGGCATCTTCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGSSFWY*GIFFSI
Trigger: GATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCT...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCGGGTGGAGTACTTGCTaGGCTCTTTCTGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: WLSLHCWSLILKRYPRGLGWSTC*ALSGTE
Trigger: CTCAGTACCAGAAAGAGCTCAGCAAGTACTCCACCC...GAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTTCAGGTTTTCCTCCGTaGTGCCATTCTTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: AIALCSGASRTHLFWSIPSGFPP*CHSSKR
Trigger: TCTTTTTGAAGAATGGCATCACGGAGGAAAACCTGA...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGTCAGGTTTTCCTCCGTaGTGCCATTCTTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGSGFPP*CHSSKR
Trigger: TCTTTTTGAAGAATGGCATCACGGAGGAAAACCTGA...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ITGRRRPFILTVQKFLLLRRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...CAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LTVFPKRWRLPAGVCFSPRRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...AGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: HYRGYETLGKAKRSVPPWTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...CCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: MLAERVQGLCESNGPRTFTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCCCCAGGTTATTTGGATaGGAGCAGGCACTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RRPFILTVQKFLLLCTNCPRLFG*EQALRG
Trigger: ACCCCTCAGTGCCTGCTCTCATCCAAATAACCTGGG...GCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGCCACCTTGGACCTCCTaGGATATCCTGATTGTCACC +
Preference number: 4 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRPPWTS*DILIVT
Trigger: GGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGG...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: TNCFSKEMEASSGSLLLTVLVHS*PLNEGG
Trigger: TCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAAC...GGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLVLVHS*PLNEGG
Trigger: TCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAAC...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR TCA 90 bp AGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: RMARQPSCICCFSFCFRAVLVHS*PLNEGG
Trigger: TCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAAC...AGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: RRPFILTVQKFLLLCTNCVLVHS*PLNEGG
Trigger: TCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAAC...GCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTCTGGTCCATTCCTaGCCCTTGAACGAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRVLVHS*PLNEGG
Trigger: TCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAAC...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: CTTGGMRRWERQRGLFHLKLRII*LKMLAE
Trigger: CTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTT...AAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCAATTCATGGAGCACAGGGGAGCTGGGGTCAAAGCCTCGATCCAGGATCAGGAAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: SIHGAQGSWGQSLDPGSGKLRII*LKMLAE
Trigger: CTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTT...TCCTGATCCTGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCCATGAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp GGGAGGGAGACGGGGAGAGATCTGACGACTAATCTCAGTGCAAGGGGAGATTTCAAACACGATGATGTATaGCCCCACACAACACAAGGT +
Preference number: 4 (lower is better)
Translates to: GRETGRDLTTNLSARGDFKHDDV*PHTTQG
Trigger: ACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTT...GAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCTCCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCAATTCATGGAGCACAGGGGAGCTGGGGTCAAAGCCTCGATCCAGGATCAGGACTCTTACAAACACGATaGTGTATGACCCCACACAAC +
Preference number: 4 (lower is better)
Translates to: SIHGAQGSWGQSLDPGSGLLQTR*CMTPHN
Trigger: GTTGTGTGGGGTCATACATCATCGTGTTTGTAAGAG...TCCTGATCCTGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCCATGAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTAGAGCTGCTGAGTCTTaGGGATGGCGAGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLRAAES*GWRDSL
Trigger: AAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCT...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR TCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISSRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAGCAGGCACTGAGGGGTAGGGACTGGAATGAAGATAGCAGATTAGTCCTCAGTAGACGGGGAGAGATCTaGCGACTAATCTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: EQALRGRDWNEDSRLVLSRRGEI*RLISVQ
Trigger: TTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCT...ACTGAGGACTAATCTGCTATCTTCATTCCAGTCCCTACCCCTCAGTGCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGGCACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACAACCGGGAAGGGGTGCTaGTTTCTTTATTTATTAGAC +
Preference number: 4 (lower is better)
Translates to: GHCDLDWRTSLGITALWTTGKGC*FLYLLD
Trigger: GTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGT...TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCTCGCCTCCTCTGCGATaGACCACTGCAAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVSPPLR*TTAKAF
Trigger: GAAAGCTTTTGCAGTGGTTCATCGCAGAGGAGGCGA...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637173.2
CDS-3UTR GCA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACCCGTGCCTCCCCGATaGCGCTGGTCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQPVPPR*RWSHTC
Trigger: ACAAGTATGAGACCAGCGGCATCGGGGAGGCACGGG...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGACCCGTGCCTCCCCGATaGCGCTGGTCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRPVPPR*RWSHTC
Trigger: ACAAGTATGAGACCAGCGGCATCGGGGAGGCACGGG...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp ACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTTCACCTCCTTCACCCGTaGCTCCCCGATGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: TDISMILNKDRNNPKQGFHLLHP*LPDAAG
Trigger: ACCAGCGGCATCGGGGAGGCACGGGTGAAGGAGGTG...AAAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTGACACCTCTGCGATGTaGTTGTGGCGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLDTSAM*LWRSAI
Trigger: GATAGCACTGCGCCACAAGCACATCGCAGAGGTGTC...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp TTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACAGTTCCTGGGACACCTCTaGGATGTGCTTGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: FVSNKKRASLNTRMQRQQFLGHL*DVLVAQ
Trigger: CTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAA...CTGTTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCAGTCCTCAGCAAGGTaGAGGTGGGTGGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: CVQQFLWGEDVCGSLFLWQSSAR*RWVEYL
Trigger: CAAGTACTCCACCCACCTGCACCTTGCTGAGGACTG...CCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGCAGTCCTCAGCAAGGTaGAGGTGGGTGGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRQSSAR*RWVEYL
Trigger: CAAGTACTCCACCCACCTGCACCTTGCTGAGGACTG...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACAGTCCTCAGCAAGGTaGAGGTGGGTGGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGQSSAR*RWVEYL
Trigger: CAAGTACTCCACCCACCTGCACCTTGCTGAGGACTG...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGARVCLR*LGNASY
Trigger: GTATGAAGCATTACCAAGGCACCGTAGACAAACTCT...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GGGCACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACAAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: GHCDLDWRTSLGITALWTRVCLR*LGNASY
Trigger: GTATGAAGCATTACCAAGGCACCGTAGACAAACTCT...TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 4 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPSRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAGCTGGCCTGACTTCGTaGAGACACCCCAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SQILNNGEKASIHPNSPEAGLTS*RHPSLH
Trigger: GTGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGC...TTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGCAGCCTTCCTGCATTTaGTGCTTTAGTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: HYRGYETLGKAKRSVPPWQPSCI*CFSFCF
Trigger: AAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTG...CCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTAAATACACACATGGCCTaGAGGAGGTCAAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVNTHMA*RRSRAA
Trigger: CGCCGCCCTTGACCTCCTGCAGGCCATGTGTGTATT...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCGGTGGTCGCCTCCTCTaGGATGAACCACTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: RRPFILTVQKFLLLCTNCGGRLL*DEPLQK
Trigger: CTTTTGCAGTGGTTCATCGCAGAGGAGGCGACCACC...GCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637173.2
CDS-3UTR GCA 90 bp TGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCCTTCTCTCTGCTCCTaGCCAGGAAACTGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: CVQQFLWGEDVCGSLFLWPSLCS*PGNCAL
Trigger: GAGAGCACAGTTTCCTGGGCAGGAGCAGAGAGAAGG...CCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637521.2
CDS-3UTR GCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTCTGGGCCTTCTCTCTaGTCCTGCCCAGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFSGPSL*SCPGNC
Trigger: ACAGTTTCCTGGGCAGGAGCAGAGAGAAGGCCCAGA...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637521.2
CDS-3UTR GCA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCATCATGCATAATCTCTaGGGCCCAGCTCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGIMHNL*GPALGS
Trigger: AGAGCCCAGAGCTGGGCCGCAGAGATTATGCATGAT...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637521.2
CDS-3UTR GCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACAACACAGCTGAGCTCTaGGGTCTGAACTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: LRKSGRISWEGDGERSDDNTAEL*GLNSVE
Trigger: TTCCACAGAGTTCAGACCGCAGAGCTCAGCTGTGTT...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR GCA 90 bp CCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGGTGATCCAGCAATCCTaGTCTCGTTATGCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: PKFLPFHTQAMCTSPRVMVIQQS*SRYALG
Trigger: ACCGAGGGCATAACGAGAGCAGGATTGCTGGATCAC...CATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637060.2
CDS-3UTR CCA 90 bp TTATTTTCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGGGCCAATGGGGGCCATaGCGCTGCGCGAGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: LFSFVSNKKRASLNTRMQGQWGP*RCASLP
Trigger: CGGGAGACTCGCGCAGCGCCATGGCCCCCATTGGCC...CTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGAAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACATTTGGCCAATGGGGGCCATaGCGCTGCGCGAGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: SHYPDFGICHSHACFHTFGQWGP*RCASLP
Trigger: CGGGAGACTCGCGCAGCGCCATGGCCCCCATTGGCC...AAATGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGGACTTCTCGGATaGAGTGATGAGATACACAGC +
Preference number: 4 (lower is better)
Translates to: SVLRKSGRISWEGDGERSDGLLG*SDEIHS
Trigger: GCTGTGTATCTCATCACTCCATCCGAGAAGTCCGTC...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: TNCFSKEMEASSGSLLLTGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...GGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GACCACAGACTTGCTGGCTCACAGGACATGCATACCTTCAACTTTACTAGACACGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: DHRLAGSQDMHTFNFTRHGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...GTGTCTAGTAAAGTTGAAGGTATGCATGTCCTGTGAGCCAGCAAGTCTGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR CCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGAGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp CGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGGGAGCGTGCCTTGTCTaGGCCCTCCCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: RQMQFVSLPTFCIYENSLGACLV*ALPHCW
Trigger: CCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCC...CAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAATCCAGGATCAGGAGCTaGGAGCGTGCCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQSRIRS*ERALSG
Trigger: CCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGA...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTCTGCGATGTGCTTGTaGCGCAGTGCTATCCACAGG +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLSAMCL*RSAIHR
Trigger: CCTGTGGATAGCACTGCGCCACAAGCACATCGCAGA...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGATCTGCGATGTGCTTGTaGCGCAGTGCTATCCACAGG +
Preference number: 4 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGSAMCL*RSAIHR
Trigger: CCTGTGGATAGCACTGCGCCACAAGCACATCGCAGA...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp CAGGCTTCAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCACAGGTCCCGCATGGTaGTCTTCTCTCCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: QASDVPNHKKTALREWLPTGPAW*SSLQYS
Trigger: TGAATACTGGAGAGAAGACCACCATGCGGGACCTGT...GGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTGAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp ATTCTTTTCTCCCCAGGCTTGGCTTGGACTCATCGTCAACAGCAGCAGCATCATATCTTCTTCAGCATCTaGGACAGGTCCCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: ILFSPGLAWTHRQQQQHHIFFSI*DRSRMV
Trigger: CACCATGCGGGACCTGTCCCAGATGCTGAAGAAGAT...ATGATGCTGCTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp CGCATTCCTTCTGGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTATCTTCTTCAGCATCTaGGACAGGTCCCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: RIPSGRQMQFVSLPTFCIIFFSI*DRSRMV
Trigger: CACCATGCGGGACCTGTCCCAGATGCTGAAGAAGAT...AATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAGGAATGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp CCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGATCTTCTTCAGCATCTaGGACAGGTCCCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: PKFLPFHTQAMCTSPRVMIFFSI*DRSRMV
Trigger: CACCATGCGGGACCTGTCCCAGATGCTGAAGAAGAT...CATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTATCTTCTTCAGCATCTaGGACAGGTCCCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPIFFSI*DRSRMV
Trigger: CACCATGCGGGACCTGTCCCAGATGCTGAAGAAGAT...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLSARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp ATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTCCTCCGGGGGTATCTaGGCGTGCTGGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: MARQPSCICCFSFCFRAKSSGGI*ACWISL
Trigger: CAAACTGATCCAGCACGCCCAGATACCCCCGGAGGA...CTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGACCTCCCACTTTCCGTTaGCCTGGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRPPTFR*PGSPRR
Trigger: CCTACGAGGTGACCCAGGCCAACGGAAAGTGGGAGG...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGACTCTCACTCCATTGTTaGAGCCTGATCCTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: AGACGSVLRKSGRISWEGLSLHC*SLILKR
Trigger: TCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR CCA 90 bp CGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: RPFILTVQKFLLLCTNCTCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...TGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTGGGGACAGAAGGGCCTaGGCCACAGGCTCCAGACTA +
Preference number: 4 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFGDRRA*ATGSRL
Trigger: TAGTCTGGAGCCTGTGGCCCAGGCCCTTCTGTCCCC...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGCAGCAGCAGCACAAATaGTGTGCTCACCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: KHPNFYRSIPKQCARHPGQQQHK*CAHHWR
Trigger: TCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTG...CCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GAAGATAGCAGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTCAGACTGGAGCCCCCTaGACACCGGGAAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: EDSRLVLSVKYSKNTDISQTGAP*TPGRGA
Trigger: AGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTG...AGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCTGCTATCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTTCAGACTGGAGCCCCCTaGACACCGGGAAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: TDISMILNKDRNNPKQGFQTGAP*TPGRGA
Trigger: AGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTG...AAAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACAGCAAGCAACGGGGACCTaGGTCCAGAAGACTCCATGC +
Preference number: 4 (lower is better)
Translates to: FVSNKKRASLNTRMQRQQQATGT*VQKTPC
Trigger: GCATGGAGTCTTCTGGACCCAGGTCCCCGTTGCTTG...CTGTTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637173.2
CDS-3UTR TCA 90 bp GCCAGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACACTCCGACAACAGCTTTaGGGCCAATGGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: ASHYPDFGICHSHACFHTLRQQL*GQWGPW
Trigger: CCATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAG...TGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp GGGCACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACAATTCCCCCTTCTTCTTaGCCTTCTTTATCACATCAT +
Preference number: 4 (lower is better)
Translates to: GHCDLDWRTSLGITALWTIPPSS*PSLSHH
Trigger: ATGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAAT...TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ATTCTTTTCTCCCCAGGCTTGGCTTGGACTCATCGTCAACAGCAGCAGCATCATTTATGCCCTCGGTCATaGTGTCTGTCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ILFSPGLAWTHRQQQQHHLCPRS*CLSSCS
Trigger: GCTGCAAGATGACAGACATCATGACCGAGGGCATAA...ATGATGCTGCTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTATTATGCCCTCGGTCATaGTGTCTGTCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLLCPRS*CLSSCS
Trigger: GCTGCAAGATGACAGACATCATGACCGAGGGCATAA...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp CCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTTATGCCCTCGGTCATaGTGTCTGTCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PKFLPFHTQAMCTSPRVMLCPRS*CLSSCS
Trigger: GCTGCAAGATGACAGACATCATGACCGAGGGCATAA...CATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTTTATGCCCTCGGTCATaGTGTCTGTCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPLCPRS*CLSSCS
Trigger: GCTGCAAGATGACAGACATCATGACCGAGGGCATAA...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp CTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTACAGCCCTTTGTATTTTTGTCCTGGATTAGCTaGGCCAGCAGGGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: LLLLSKSSSSELLQPFVFLSWIS*ASRALS
Trigger: GGACAATGCCCTGCTGGCTCAGCTAATCCAGGACAA...AAATACAAAGGGCTGTAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTATTGTCCTGGATTAGCTaGGCCAGCAGGGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVLSWIS*ASRALS
Trigger: GGACAATGCCCTGCTGGCTCAGCTAATCCAGGACAA...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGTTGTCCTGGATTAGCTaGGCCAGCAGGGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: KNTQISTVPYPSNVHVTQLSWIS*ASRALS
Trigger: GGACAATGCCCTGCTGGCTCAGCTAATCCAGGACAA...CTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCGGGTGGAGTACTTGCTaGGCTCTTTCTGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFGWSTC*ALSGTE
Trigger: CTCAGTACCAGAAAGAGCTCAGCAAGTACTCCACCC...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp CAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGGCACTGTTTTTGTCATAAGTGCTaGCATTGGCATCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QRDGGFQREFASHLSGHCFCHKC*HWHPAE
Trigger: TTCTGCTGGATGCCAATGTCAGCACTTATGACAAAA...ACAGTGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAATGGGCACGCCGAGGTaGGCCATGTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRMGTPR*AMLVMI
Trigger: GATCATCACCAACATGGCTCACCTCGGCGTGCCCAT...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LRMARQPSCICCFSFCFRRRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAAGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 4 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 4 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGCCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCCCACCTTGGACCTCCTaGGATATCCTGATTGTCACC +
Preference number: 4 (lower is better)
Translates to: RRPFILTVQKFLLLCTNCPPWTS*DILIVT
Trigger: GGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGG...GCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISKLRII*LKMLAE
Trigger: CTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTT...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGKLRII*LKMLAE
Trigger: CTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTT...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTGTCCTCAATAGTGTCCTCCATGATGTCCTTGATAATCGGAGTCCACCGTGAGGAGAATGAGAGCTGCTaGGTCTTGAGGATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: LSSIVSSMMSLIIGVHREENESC*VLRMAR
Trigger: TCTCGCCATCCTCAAGACTCAGCAGCTCTCATTCTC...CTCACGGTGGACTCCGATTATCAAGGACATCATGGAGGACACTATTGAGGACAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp AGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTGAGAATGAGAGCTGCTaGGTCTTGAGGATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: RMARQPSCICCFSFCFRAENESC*VLRMAR
Trigger: TCTCGCCATCCTCAAGACTCAGCAGCTCTCATTCTC...AGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTTCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 4 (lower is better)
Translates to: SVLRKSGRISWEGDGERSSRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCTTTGGAAAGAGTCAGCAGAGTCCAAGGAATAGACCTGGGATTCATACGGGAGAGACGGGGAGAGATCTaGCGACTAATCTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: ALERVSRVQGIDLGFIRERRGEI*RLISVQ
Trigger: TTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCT...CTCCCGTATGAATCCCAGGTCTATTCCTTGGACTCTGCTGACTCTTTCCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGCAGTTTCTGTGGGGTaGGGATGTGTGTGGATCCTA +
Preference number: 4 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLAVSVG*GCVWIL
Trigger: TAGGATCCACACACATCCTCACCCCACAGAAACTGC...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373299.5
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
CDS-3UTR TCA 90 bp ATTCTTTTCTCCCCAGGCTTGGCTTGGACTCATCGTCAACAGCAGCAGCATCATATCATCATCAATGGCTaGGCCCTCACTGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ILFSPGLAWTHRQQQQHHIIING*ALTVLP
Trigger: AGGAAGCACAGTGAGGGCTCAGCCATTGATGATGAT...ATGATGCTGCTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGTAAAATGGTACAGCTaGTGTGGAAAACAGGCCGGC +
Preference number: 4 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQVKWYS*CGKQAG
Trigger: GCCGGCCTGTTTTCCACATCAGCTGTACCATTTTAC...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000637173.2
ENST00000650920.1
CDS-3UTR GCA 90 bp CAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATAGTGAAGAAGACGTGTaGAGCCCGGTATTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: QMYLITRKLRLGSGCPPHSEEDV*SPVFSS
Trigger: ACTGCTAAATACCGGGCTGCACACGTCTTCTTCACT...ATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp ACTTTCCGTTGGCCTGGGTCACCTCGTAGGCGCAGCGCATCTCATTCAGGCTCATTCATACGGGAGAAATaGAATATTGATTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: TFRWPGSPRRRSASHSGSFIREK*NIDFRQ
Trigger: CTGACGGAAATCAATATTGCATTTCTCCCGTATGAA...TGAGCCTGAATGAGATGCGCTGCGCCTACGAGGTGACCCAGGCCAACGGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR GCA 90 bp GACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGGTTCATACGGGAGAAATaGAATATTGATTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: DLDWRTSLGITALWTQAGFIREK*NIDFRQ
Trigger: CTGACGGAAATCAATATTGCATTTCTCCCGTATGAA...CCCAGCCTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFGRDLL*QALQYR
Trigger: CCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACC...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTCAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFQRVAI*SARRSS
Trigger: ACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTG...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTCCCGTGCCTCCCCGATaGCGCTGGTCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFPVPPR*RWSHTC
Trigger: ACAAGTATGAGACCAGCGGCATCGGGGAGGCACGGG...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTCACCTCCTTCACCCGTaGCTCCCCGATGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: RCSLSVCQHSAFMRTVCCHLLHP*LPDAAG
Trigger: ACCAGCGGCATCGGGGAGGCACGGGTGAAGGAGGTG...ACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGACACCTCTGCGATGTaGTTGTGGCGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: LRMARQPSCICCFSFCFRDTSAM*LWRSAI
Trigger: GATAGCACTGCGCCACAAGCACATCGCAGAGGTGTC...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGATTCCTGGGACACCTCTaGGATGTGCTTGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRFLGHL*DVLVAQ
Trigger: CTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAA...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTAGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVGGIWA*WISLFR
Trigger: CCTGAACAAACTGATCCAGCACGCCCAGATACCCCC...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SVSSSFCGVRMCVDLCFFGGIWA*WISLFR
Trigger: CCTGAACAAACTGATCCAGCACGCCCAGATACCCCC...AAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp CCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGCATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 4 (lower is better)
Translates to: PKFLPFHTQAMCTSPRVMHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...CATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGCATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 4 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCCTGACTGAAGATGCTTaGCGAGAGGGTACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TNCFSKEMEASSGSLLLTLTEDA*REGTGS
Trigger: AGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAG...GGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCCTGACTGAAGATGCTTaGCGAGAGGGTACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RRPFILTVQKFLLLCTNCLTEDA*REGTGS
Trigger: AGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAG...GCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CACAGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCCTTCCTGCATTTGCTaGTTTAGTTTCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: HSCTTGGMRRWERQRGLFPSCIC*FSFCFR
Trigger: TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGG...GAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTCAGCCTTCCTGCATTTaGTGCTTTAGTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PPEPICSGPFLTLERRRTQPSCI*CFSFCF
Trigger: AAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTG...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAAATGAGCTGTTGGCGAGACAGCCTTCCTaGATTTGCTGCTTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: SGPFLTLERRRTRENELLARQPS*ICCFSF
Trigger: GAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGC...CAACAGCTCATTTTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGGCAGCACAAATGGTGTaGTCACCACTGGAGAATGAG +
Preference number: 4 (lower is better)
Translates to: PKFLPFHTQAMCTSPRVMAAQMV*SPLENE
Trigger: CTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGC...CATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGAATACACACATGGCCTaGAGGAGGTCAAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMNTHMA*RRSRAA
Trigger: CGCCGCCCTTGACCTCCTGCAGGCCATGTGTGTATT...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGAAGAGAACACCACAATaGAGCGAGCAGAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: KNTQISTVPYPSNVHVTQKRTPQ*SEQRGR
Trigger: CCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTT...CTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGGCTTCAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCTTCTGGGCGGCAGATaGAGTTTGTCAGTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RLQMYLITRKLRLGSGCPLLGGR*SLSVCQ
Trigger: TTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAG...AGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp TTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCCGCTTAGGGAGTGGCTaGCCTCCGCATTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LPTFCIYENSLLFTHVASRLGSG*PPHSFW
Trigger: CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCG...GGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp CTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCTTCTATTGGGTGGGCTaGCTTTTCTTTCTTGATTTA +
Preference number: 4 (lower is better)
Translates to: LAERVQGLCESNGPRTFSFYWVG*LFFLDL
Trigger: TAAATCAAGAAAGAAAAGGCAGCCCACCCAATAGAA...GGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR GCA 90 bp GCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAACCTATGAGCAACACTaGACATGTATTCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: AGACGSVLRKSGRISWEGTYEQH*TCIPAH
Trigger: ATGTGCAGGAATACATGTGCAGTGTTGCTCATAGGT...TCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR CCA 90 bp AAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGGACGGACTTCTCGGATaGAGTGATGAGATACACAGC +
Preference number: 4 (lower is better)
Translates to: KHPNFYRSIPKQCARHPGDGLLG*SDEIHS
Trigger: GCTGTGTATCTCATCACTCCATCCGAGAAGTCCGTC...CCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGGACGGACTTCTCGGATaGAGTGATGAGATACACAGC +
Preference number: 4 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRDGLLG*SDEIHS
Trigger: GCTGTGTATCTCATCACTCCATCCGAGAAGTCCGTC...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGGCTTCAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTTCACTGATGAGAGAGTaGACGGACTTCTCGGATGGA +
Preference number: 4 (lower is better)
Translates to: RLQMYLITRKLRLGSGCPSLMRE*TDFSDG
Trigger: TCCATCCGAGAAGTCCGTCCACTCTCTCATCAGTGA...AGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCTCACTGATGAGAGAGTaGACGGACTTCTCGGATGGA +
Preference number: 4 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGSLMRE*TDFSDG
Trigger: TCCATCCGAGAAGTCCGTCCACTCTCTCATCAGTGA...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTTCACTGATGAGAGAGTaGACGGACTTCTCGGATGGA +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPSLMRE*TDFSDG
Trigger: TCCATCCGAGAAGTCCGTCCACTCTCTCATCAGTGA...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTATTAAACAGGGCATCTaGACAAGAGTCAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSIKQGI*TRVSEE
Trigger: TTCTTCACTGACTCTTGTCCAGATGCCCTGTTTAAT...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAATTAAACAGGGCATCTaGACAAGAGTCAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LKMLAERVQGLCESNGPRIKQGI*TRVSEE
Trigger: TTCTTCACTGACTCTTGTCCAGATGCCCTGTTTAAT...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACAGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCATTAAACAGGGCATCTaGACAAGAGTCAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: HSCTTGGMRRWERQRGLFIKQGI*TRVSEE
Trigger: TTCTTCACTGACTCTTGTCCAGATGCCCTGTTTAAT...GAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTGCCCTCCCCCATTGTTaGATCATCAGCTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPALPHC*IISFIG
Trigger: GCCTATAAAGCTGATGATCCAACAATGGGGGAGGGC...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGAGCGTGCCTTGTCTaGGCCCTCCCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: KNTDISMILNKDRNNPKQGACLV*ALPHCW
Trigger: CCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCC...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGGGAGCGTGCCTTGTCTaGGCCCTCCCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: SVKYSKNTDISMILNKDRGACLV*ALPHCW
Trigger: CCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCC...CCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTGGAGCACAGGGGAGCTaGGGTCAAAGCCTCGATCCA +
Preference number: 4 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFGAQGS*GQSLDP
Trigger: TGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCC...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGCCTCCCCGATGCCGCTaGTCTCATACTTGTATACAT +
Preference number: 4 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRPPRCR*SHTCIH
Trigger: ATGTATACAAGTATGAGACCAGCGGCATCGGGGAGG...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ATTCTTTTCTCCCCAGGCTTGGCTTGGACTCATCGTCAACAGCAGCAGCATCATCCTCCCCGATGCCGCTaGTCTCATACTTGTATACAT +
Preference number: 4 (lower is better)
Translates to: ILFSPGLAWTHRQQQQHHPPRCR*SHTCIH
Trigger: ATGTATACAAGTATGAGACCAGCGGCATCGGGGAGG...ATGATGCTGCTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp AGGCTTCAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCTCCCCGATGCCGCTaGTCTCATACTTGTATACAT +
Preference number: 4 (lower is better)
Translates to: RLQMYLITRKLRLGSGCPPPRCR*SHTCIH
Trigger: ATGTATACAAGTATGAGACCAGCGGCATCGGGGAGG...AGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCCCTCCCCGATGCCGCTaGTCTCATACTTGTATACAT +
Preference number: 4 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGPPRCR*SHTCIH
Trigger: ATGTATACAAGTATGAGACCAGCGGCATCGGGGAGG...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTCCTCCCCGATGCCGCTaGTCTCATACTTGTATACAT +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPPPRCR*SHTCIH
Trigger: ATGTATACAAGTATGAGACCAGCGGCATCGGGGAGG...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp TTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCGACCGGGTGACTTCCTaGGACACCTCTGCGATGTGC +
Preference number: 4 (lower is better)
Translates to: LPTFCIYENSLLFTHVASDRVTS*DTSAMC
Trigger: GCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC...GGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp AGGCTTCAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTACAGGTCCCGCATGGTaGTCTTCTCTCCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: RLQMYLITRKLRLGSGCPTGPAW*SSLQYS
Trigger: TGAATACTGGAGAGAAGACCACCATGCGGGACCTGT...AGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp AAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGACAGGTCCCGCATGGTaGTCTTCTCTCCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: KHPNFYRSIPKQCARHPGTGPAW*SSLQYS
Trigger: TGAATACTGGAGAGAAGACCACCATGCGGGACCTGT...CCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATGGGACAGGTCCCGCATaGTGGTCTTCTCTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: FHTQAMCTSPRVMYKVTNGTGPA*WSSLQY
Trigger: ATACTGGAGAGAAGACCACCATGCGGGACCTGTCCC...ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGGACAGGTCCCGCATaGTGGTCTTCTCTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: KNTQISTVPYPSNVHVTQGTGPA*WSSLQY
Trigger: ATACTGGAGAGAAGACCACCATGCGGGACCTGTCCC...CTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGGACAGGTCCCGCATaGTGGTCTTCTCTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: SVSSSFCGVRMCVDLCFFGTGPA*WSSLQY
Trigger: ATACTGGAGAGAAGACCACCATGCGGGACCTGTCCC...AAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTATCTTCTTCAGCATCTaGGACAGGTCCCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLIFFSI*DRSRMV
Trigger: CACCATGCGGGACCTGTCCCAGATGCTGAAGAAGAT...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp CGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RPFILTVQKFLLLCTNCTSARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...TGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GRQMQFVSLPTFCIYENSSARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...ACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCCAGCATCTGTGCCCATaGCCAGGTCCTGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: LPTFCIYENSLLFTHVASQHLCP*PGPAPL
Trigger: GAGTGGAGCAGGACCTGGCCATGGGCACAGATGCTG...GGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGGTATCTGGGCGTGCTaGATCAGTTTGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRAGIWAC*ISLFRF
Trigger: AAACCTGAACAAACTGATCCAGCACGCCCAGATACC...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGTCCTCCGGGGGTATCTaGGCGTGCTGGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMSSGGI*ACWISL
Trigger: CAAACTGATCCAGCACGCCCAGATACCCCCGGAGGA...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGATCCTCCGGGGGTATCTaGGCGTGCTGGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRSSGGI*ACWISL
Trigger: CAAACTGATCCAGCACGCCCAGATACCCCCGGAGGA...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp TTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGCCTCCCACTTTCCGTTaGCCTGGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: FCIYENSLLFTHVASRILPPTFR*PGSPRR
Trigger: CCTACGAGGTGACCCAGGCCAACGGAAAGTGGGAGG...CAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACCAGGGCGTGCAGGGCTaGGGAGGCAACAGACGCAAA +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNQGVQG*GGNRRK
Trigger: TTTGCGTCTGTTGCCTCCCCAGCCCTGCACGCCCTG...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: MARQPSCICCFSFCFRAKGGMRR*ERQRGL
Trigger: CAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCC...CTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACAGGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: FVSNKKRASLNTRMQRQQGGMRR*ERQRGL
Trigger: CAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCC...CTGTTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAATGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACCGGGAAGGGGTGCTGATTTCTTTATTTATTAGACTCAAGTGCTTTAGTACAGGGATCACAGCACTGTaGACACAGGCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HREGVLISLFIRLKCFSTGITAL*TQAGEG
Trigger: CCCCTCCCCAGCCTGTGTCCACAGTGCTGTGATCCC...TGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAATGTTGGGATGATGCCTaGGGACAGAAGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SQILNNGEKASIHPNSPECWDDA*GQKGLG
Trigger: GCCCAGGCCCTTCTGTCCCCAGGCATCATCCCAACA...TTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTTGTTGGGATGATGCCTaGGGACAGAAGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFCWDDA*GQKGLG
Trigger: GCCCAGGCCCTTCTGTCCCCAGGCATCATCCCAACA...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCCAAGTAATACACACATaGCCTGCAGGAGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVQVIHT*PAGGQG
Trigger: CCCTTGACCTCCTGCAGGCCATGTGTGTATTACTTG...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTTCAGGTCGTATAAGTTaGGAGGGAGACGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LTVFPKRWRLPAGVCFSPSGRIS*EGDGER
Trigger: TCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGA...AGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ATTCTTTTCTCCCCAGGCTTGGCTTGGACTCATCGTCAACAGCAGCAGCATCATTTTTCTCCCCAGGCTTaGCTTGGACTCATCGTCAAC +
Preference number: 4 (lower is better)
Translates to: ILFSPGLAWTHRQQQQHHFSPQA*LGLIVN
Trigger: GTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAA...ATGATGCTGCTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR CAA 72 bp CTGCCCTCCGCATTCCTTCTGGGCGGCAGATGCAGTTaGTCAGTTTGCCAACATTCTGCATTTATGAGAACA +
Preference number: 4 (lower is better)
Translates to: LPSAFLLGGRCS*SVCQHSAFMRT
Trigger: TGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAGGAATGCGGAGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAACTCCGACAACAGCTTTaGGGCCAATGGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: KNTDISMILNKDRNNPKQLRQQL*GQWGPW
Trigger: CCATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAG...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTATCCTCATGCTTAACTaGTCCACCACCAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLILMLN*STTSTF
Trigger: GAAGGTGCTGGTGGTGGATCAGTTAAGCATGAGGAT...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGAATCCTCATGCTTAACTaGTCCACCACCAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGILMLN*STTSTF
Trigger: GAAGGTGCTGGTGGTGGATCAGTTAAGCATGAGGAT...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTTATGCCCTCGGTCATaGTGTCTGTCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLLCPRS*CLSSCS
Trigger: GCTGCAAGATGACAGACATCATGACCGAGGGCATAA...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCGCTCTCTGCGCTTATTaGTATCTTCCACAATCGTTA +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISALCAY*YLPQSL
Trigger: TAACGATTGTGGAAGATATCAATAAGCGCAGAGAGC...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637173.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGAGCTCTTTCTGGTACTaGGGCATCTTCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRSSFWY*GIFFSI
Trigger: GATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCT...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGAGATGTAGAGAAGGATaGTGCGGATTTTGTCATAAG +
Preference number: 4 (lower is better)
Translates to: HCDLDWRTSLGITALWTQRCREG*CGFCHK
Trigger: CTTATGACAAAATCCGCATCATCCTTCTCTACATCT...CTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGTCAGGTTTTCCTCCGTaGTGCCATTCTTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAESGFPP*CHSSKR
Trigger: TCTTTTTGAAGAATGGCATCACGGAGGAAAACCTGA...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAAGCAGCGTGGAATCGGTaGCGATGGGCACGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: ISPQCEILQEHRHLYDSQAAWNR*RWARRG
Trigger: ACCTCGGCGTGCCCATCGTCACCGATTCCACGCTGC...TTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CATTGGGTGAATACACAGTTTATCTGTTCTCTTCTTGATGAGCATTGGGCTTTTGGTAGGTCTGCTCGCTaGTGCGTTCCTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: HWVNTQFICSLLDEHWAFGRSAR*CVPSAP
Trigger: CGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACC...AAAAGCCCAATGCTCATCAAGAAGAGAACAGATAAACTGTGTATTCACCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp TCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SQILNNGEKASIHPNSPENRSPP*ELVGLL
Trigger: GAGCAGACCTACCAGCTCTCACGGTGGACTCCGATT...TTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGAGTAATCGGAGTCCACCGTaGGAGCTGGTAGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: CIYENSLLFTHVASRILSNRSPP*ELVGLL
Trigger: GAGCAGACCTACCAGCTCTCACGGTGGACTCCGATT...ACTCAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp GCTGTGAGGGCAGCACTGGACACATTTTCAATCGGTGTTGAGAACTGCAAGCATGTGGGAGTAAGAATGTaGGTAGAACCTATCAGCACC +
Preference number: 4 (lower is better)
Translates to: AVRAALDTFSIGVENCKHVGVRM*VEPIST
Trigger: GGTGCTGATAGGTTCTACTCACATTCTTACTCCCAC...ATGCTTGCAGTTCTCAACACCGATTGAAAATGTGTCCAGTGCTGCCCTCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494254.3
CDS-3UTR TCA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCGTGGGAGTAAGAATGTaGGTAGAACCTATCAGCACC +
Preference number: 4 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGVGVRM*VEPIST
Trigger: GGTGCTGATAGGTTCTACTCACATTCTTACTCCCAC...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTGCAGTTTCTGTGGGGTaGGGATGTGTGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLAVSVG*GCVWIF
Trigger: AAAGATCCACACACATCCTCACCCCACAGAAACTGC...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCGCAGTTTCTGTGGGGTaGGGATGTGTGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFAVSVG*GCVWIF
Trigger: AAAGATCCACACACATCCTCACCCCACAGAAACTGC...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp AGTGCTGACATTGGCATCCAGCAGAATGGGGACGATGGCTCGCATAGGGTCCTTTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: SADIGIQQNGDDGSHRVLCTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...AAGGACCCTATGCGAGCCATCGTCCCCATTCTGCTGGATGCCAATGTCAGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp ATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGCCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: ITGRRRPFILTVQKFLLLPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...CAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACAAACACGATGATGTATaGCCCCACACAACACAAGGT +
Preference number: 4 (lower is better)
Translates to: LRKSGRISWEGDGERSDDKHDDV*PHTTQG
Trigger: ACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTT...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAGCAGGCACTGAGGGGTAGGGACTGGAATGAAGATAGCAGATTAGTCCTCAGTAAACACGATGATGTATaGCCCCACACAACACAAGGT +
Preference number: 4 (lower is better)
Translates to: EQALRGRDWNEDSRLVLSKHDDV*PHTTQG
Trigger: ACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTT...ACTGAGGACTAATCTGCTATCTTCATTCCAGTCCCTACCCCTCAGTGCCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAAATGAGCTGTTGCTCTTACAAACACGATaGTGTATGACCCCACACAAC +
Preference number: 4 (lower is better)
Translates to: SGPFLTLERRRTRENELLLLQTR*CMTPHN
Trigger: GTTGTGTGGGGTCATACATCATCGTGTTTGTAAGAG...CAACAGCTCATTTTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAACAAGGTCCTGAAGCATaGGCACTGTTTGGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQQGPEA*ALFGPR
Trigger: CCTCGGACCAAACAGTGCTCATGCTTCAGGACCTTG...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGCGACAAACAAGGTCCTaGAGCATGAGCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRRQTRS*SMSTVW
Trigger: CCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCG...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCCGACAAACAAGGTCCTaGAGCATGAGCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFRQTRS*SMSTVW
Trigger: CCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCG...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR TCA 90 bp CTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTCGACAAACAAGGTCCTaGAGCATGAGCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: LTVFPKRWRLPAGVCFSPRQTRS*SMSTVW
Trigger: CCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCG...AGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAAAGAATGGTACAGAGATaGTATATGTTTGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RREHHNAASREGGEQALKRMVQR*YMFVLQ
Trigger: CTGAAGCACAAACATATATCATCTCTGTACCATTCT...TTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTAGAATGGTACAGAGATaGTATATGTTTGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPRMVQR*YMFVLQ
Trigger: CTGAAGCACAAACATATATCATCTCTGTACCATTCT...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAAGAATGGTACAGAGATaGTATATGTTTGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGARMVQR*YMFVLQ
Trigger: CTGAAGCACAAACATATATCATCTCTGTACCATTCT...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAACCGGGAAGGGGTGCTaGTTTCTTTATTTATTAGAC +
Preference number: 4 (lower is better)
Translates to: EPICSGPFLTLERRRTRETGKGC*FLYLLD
Trigger: GTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGT...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAGGCTTCAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCGGCCAGTCACTATCCTaGCTTTGGTATTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: QASDVPNHKKTALREWLPGQSLS*LWYLSF
Trigger: GAATGACAAATACCAAAGTCAGGATAGTGACTGGCC...GGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTGAAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp CTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTCGTCTCTATTTCCTATaGTTCTGCTCCACTCGGCAG +
Preference number: 4 (lower is better)
Translates to: LTVFPKRWRLPAGVCFSPRLYFL*FCSTRQ
Trigger: CTGCCGAGTGGAGCAGAATCATAGGAAATAGAGACG...AGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636509.2
CDS-3UTR TCA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCGGTGAGCTCTTCTCTTaGGGTTTTACCCCTTACATC +
Preference number: 4 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVGELFS*GFTPYI
Trigger: GATGTAAGGGGTAAAACCTCAAGAGAAGAGCTCACC...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR GCA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCAGTGAAGAAGACGTGTaGAGCCCGGTATTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGSEEDV*SPVFSS
Trigger: ACTGCTAAATACCGGGCTGCACACGTCTTCTTCACT...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTAGTGAAGAAGACGTGTaGAGCCCGGTATTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPSEEDV*SPVFSS
Trigger: ACTGCTAAATACCGGGCTGCACACGTCTTCTTCACT...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTTCATACGGGAGAAATaGAATATTGATTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPFIREK*NIDFRQ
Trigger: CTGACGGAAATCAATATTGCATTTCTCCCGTATGAA...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTGGTCAGCTGCTTAATTGATCACAGGTTCACATTATTGCTAACAGGCTTCAGAGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: LVSCLIDHRFTLLLTGFRGRDLL*QALQYR
Trigger: CCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACC...TCTGAAGCCTGTTAGCAATAATGTGAACCTGTGATCAATTAAGCAGCTGACCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp CACCGGGAAGGGGTGCTGATTTCTTTATTTATTAGACTCAAGTGCTTTAGTACAGGTCGCGATCTGCTCTaGCAGGCGCTCCAGTATAGG +
Preference number: 4 (lower is better)
Translates to: HREGVLISLFIRLKCFSTGRDLL*QALQYR
Trigger: CCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACC...TGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTGGTCAGCTGCTTAATTGATCACAGGTTCACATTATTGCTAACAGGCTTCAGACAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LVSCLIDHRFTLLLTGFRQRVAI*SARRSS
Trigger: ACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTG...TCTGAAGCCTGTTAGCAATAATGTGAACCTGTGATCAATTAAGCAGCTGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGGACACCTCTGCGATGTaGTTGTGGCGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMDTSAM*LWRSAI
Trigger: GATAGCACTGCGCCACAAGCACATCGCAGAGGTGTC...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GCAATATGTGGTGCTTTTTATGAGGTTTTGAAGTGCCGTGGTTTGCCACGGTTACAGTCCTCAGCAAGGTaGAGGTGGGTGGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: AICGAFYEVLKCRGLPRLQSSAR*RWVEYL
Trigger: CAAGTACTCCACCCACCTGCACCTTGCTGAGGACTG...TAACCGTGGCAAACCACGGCACTTCAAAACCTCATAAAAAGCACCACATATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: EPICSGPFLTLERRRTRERVCLR*LGNASY
Trigger: GTATGAAGCATTACCAAGGCACCGTAGACAAACTCT...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CACCGGGAAGGGGTGCTGATTTCTTTATTTATTAGACTCAAGTGCTTTAGTACACTCCCTCAGCATCTGTaGCCATGGCCAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HREGVLISLFIRLKCFSTLPQHL*PWPGPA
Trigger: AGCAGGACCTGGCCATGGGCACAGATGCTGAGGGAG...TGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAAGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQGGIWA*WISLFR
Trigger: CCTGAACAAACTGATCCAGCACGCCCAGATACCCCC...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRGGIWA*WISLFR
Trigger: CCTGAACAAACTGATCCAGCACGCCCAGATACCCCC...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp AGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACCTCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 4 (lower is better)
Translates to: SVSSSFCGVRMCVDPISTSRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...GGTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR GCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISSRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGCATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 4 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGCCTCCACCCACAGCTaGACTACCGGGGGTATGAGA +
Preference number: 4 (lower is better)
Translates to: KNTDISMILNKDRNNPKQASTHS*TTGGMR
Trigger: TCTCATACCCCCGGTAGTGCAGCTGTGGGTGGAGGC...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCTGACTGCTGGCCTGACTTCGTaGAGACACCCCAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TPHNTRYYEVSETEDNLTAGLTS*RHPSLH
Trigger: GTGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGC...AGTCAGATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATAGCTGGCCTGACTTCGTaGAGACACCCCAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: DSLPAFAALVSALELSFIAGLTS*RHPSLH
Trigger: GTGGAGGCTGGGGTGTCTGCACGAAGTCAGGCCAGC...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAACTTCCAGCGGGAGTTTaGTTCTCACCTGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQLPAGV*FSPVRA
Trigger: TGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAG...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTCTGACTGAAGATGCTTaGCGAGAGGGTACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SVSSSFCGVRMCVDLCFFLTEDA*REGTGS
Trigger: AGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAG...AAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR GCA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCCAGCCTTCCTGCATTTaGTGCTTTAGTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RRWERQRGLFHLGPPEISQPSCI*CFSFCF
Trigger: AAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTG...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAAAAGAGAACACCACAATaGAGCGAGCAGAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQKRTPQ*SEQRGR
Trigger: CCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTT...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCCCCGGCGCAGGTGCCTaGGGTTCCGTCCTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: RLVLSVKYSKNTDISMILPGAGA*GSVLRK
Trigger: TTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGG...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GAAGTAAGAGATGCTCAAATCCTGATCTTCTTGAGACAACTGTCAGAGGAACCTAGCAGACTGGTGCACTaGCTTACCCCCGATACCGCA +
Preference number: 4 (lower is better)
Translates to: EVRDAQILIFLRQLSEEPSRLVH*LTPDTA
Trigger: TGCGGTATCGGGGGTAAGGCAGTGCACCAGTCTGCT...AGGTTCCTCTGACAGTTGTCTCAAGAAGATCAGGATTTGAGCATCTCTTACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR CCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTGACGGACTTCTCGGATaGAGTGATGAGATACACAGC +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLDGLLG*SDEIHS
Trigger: GCTGTGTATCTCATCACTCCATCCGAGAAGTCCGTC...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp TGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGGACGGACTTCTCGGATaGAGTGATGAGATACACAGC +
Preference number: 4 (lower is better)
Translates to: CVQQFLWGEDVCGSLFLWDGLLG*SDEIHS
Trigger: GCTGTGTATCTCATCACTCCATCCGAGAAGTCCGTC...CCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGTCACTGATGAGAGAGTaGACGGACTTCTCGGATGGA +
Preference number: 4 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRSLMRE*TDFSDG
Trigger: TCCATCCGAGAAGTCCGTCCACTCTCTCATCAGTGA...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGATTAAACAGGGCATCTaGACAAGAGTCAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: PEPICSGPFLTLERRRTRIKQGI*TRVSEE
Trigger: TTCTTCACTGACTCTTGTCCAGATGCCCTGTTTAAT...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GGGAGGGAGACGGGGAGAGATCTGACGACTAATCTCAGTGCAAGGGGAGATTTCATTAAACAGGGCATCTaGACAAGAGTCAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GRETGRDLTTNLSARGDFIKQGI*TRVSEE
Trigger: TTCTTCACTGACTCTTGTCCAGATGCCCTGTTTAAT...GAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCTCCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTGCCCTCCCCCATTGTTaGATCATCAGCTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLALPHC*IISFIG
Trigger: GCCTATAAAGCTGATGATCCAACAATGGGGGAGGGC...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGCCCTCCCCCATTGTTaGATCATCAGCTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRALPHC*IISFIG
Trigger: GCCTATAAAGCTGATGATCCAACAATGGGGGAGGGC...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTCCAGGATCAGGAGCTaGGAGCGTGCCTTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QMQFVSLPTFCIYENSLLSRIRS*ERALSG
Trigger: CCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGA...CAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp CAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGGGAGCACAGGGGAGCTaGGGTCAAAGCCTCGATCCA +
Preference number: 4 (lower is better)
Translates to: QMQFVSLPTFCIYENSLLGAQGS*GQSLDP
Trigger: TGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCC...CAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCCCTCCCCGATGCCGCTaGTCTCATACTTGTATACAT +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFPPRCR*SHTCIH
Trigger: ATGTATACAAGTATGAGACCAGCGGCATCGGGGAGG...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp TCATCATCATCATCATCATCATCATCATCAATGGCTGAGCCCTCACTGTGCTTCTCTGCGATGTGCTTGTaGCGCAGTGCTATCCACAGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSSMAEPSLCFSAMCL*RSAIHR
Trigger: CCTGTGGATAGCACTGCGCCACAAGCACATCGCAGA...GAAGCACAGTGAGGGCTCAGCCATTGATGATGATGATGATGATGATGATGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTGACCGGGTGACTTCCTaGGACACCTCTGCGATGTGC +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPDRVTS*DTSAMC
Trigger: GCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGACCGGGTGACTTCCTaGGACACCTCTGCGATGTGC +
Preference number: 4 (lower is better)
Translates to: KNTDISMILNKDRNNPKQDRVTS*DTSAMC
Trigger: GCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGACAGGTCCCGCATGGTaGTCTTCTCTCCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLTGPAW*SSLQYS
Trigger: TGAATACTGGAGAGAAGACCACCATGCGGGACCTGT...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGGACAGGTCCCGCATaGTGGTCTTCTCTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRGTGPA*WSSLQY
Trigger: ATACTGGAGAGAAGACCACCATGCGGGACCTGTCCC...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp CGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACAATCTTCTTCAGCATCTaGGACAGGTCCCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: RPFILTVQKFLLLCTNCTIFFSI*DRSRMV
Trigger: CACCATGCGGGACCTGTCCCAGATGCTGAAGAAGAT...TGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGATCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRSARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp AAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGGGTATCTGGGCGTGCTaGATCAGTTTGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: KHPNFYRSIPKQCARHPGGIWAC*ISLFRF
Trigger: AAACCTGAACAAACTGATCCAGCACGCCCAGATACC...CCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTGGTATCTGGGCGTGCTaGATCAGTTTGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPGIWAC*ISLFRF
Trigger: AAACCTGAACAAACTGATCCAGCACGCCCAGATACC...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp TTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGTCCTCCGGGGGTATCTaGGCGTGCTGGATCAGTTTG +
Preference number: 4 (lower is better)
Translates to: FCIYENSLLFTHVASRILSSGGI*ACWISL
Trigger: CAAACTGATCCAGCACGCCCAGATACCCCCGGAGGA...CAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp CAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATCTTAAATAACGGGACTGCGGTACTCGCCTaGGGCCTTGTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: QCARHPGLCTRSQILNNGTAVLA*GLVLMP
Trigger: TGGCATAAGAACAAGGCCCCAGGCGAGTACCGCAGT...CCCGTTATTTAAGATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACCGGGAAGGGGTGCTGATTTCTTTATTTATTAGACTCAAGTGCTTTAGTACACCTCCCACTTTCCGTTaGCCTGGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: HREGVLISLFIRLKCFSTPPTFR*PGSPRR
Trigger: CCTACGAGGTGACCCAGGCCAACGGAAAGTGGGAGG...TGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGCACTGTGACTTAGACTaGAGGACTTCCCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: KNTQISTVPYPSNVHVTQHCDLD*RTSLGI
Trigger: GATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG...CTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACTGTTGGGATGATGCCTaGGGACAGAAGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNCWDDA*GQKGLG
Trigger: GCCCAGGCCCTTCTGTCCCCAGGCATCATCCCAACA...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGACAGCAGCAGCACAAATaGTGTGCTCACCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: LRMARQPSCICCFSFCFRQQQHK*CAHHWR
Trigger: TCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTG...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAGCAGCAGCACAAATaGTGTGCTCACCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVQQQHK*CAHHWR
Trigger: TCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTG...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACAGCAGCAGCAGCACAAATaGTGTGCTCACCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: FVSNKKRASLNTRMQRQQQQQHK*CAHHWR
Trigger: TCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTG...CTGTTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTCAAGTAATACACACATaGCCTGCAGGAGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LTVFPKRWRLPAGVCFSPQVIHT*PAGGQG
Trigger: CCCTTGACCTCCTGCAGGCCATGTGTGTATTACTTG...AGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TGTATGACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATAAAGGGAGGCGGAGGTaGCGCCGAGCTCGCGTACAG +
Preference number: 4 (lower is better)
Translates to: CMTPHNTRYYEVSETEDNKGRRR*RRARVQ
Trigger: CTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTT...ATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTATCAGGTCGTATAAGTTaGGAGGGAGACGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVSGRIS*EGDGER
Trigger: TCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGA...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGGCAGCCTGAGTTGCAGTTACATAGAGGTTCACATTTTCGTTATTCAATAGTTGCCACTCCAGCAGACTaGTGCACTGCCTTACCCCCG +
Preference number: 4 (lower is better)
Translates to: RQPELQLHRGSHFRYSIVATPAD*CTALPP
Trigger: CGGGGGTAAGGCAGTGCACCAGTCTGCTGGAGTGGC...AACTATTGAATAACGAAAATGTGAACCTCTATGTAACTGCAACTCAGGCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR CCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATACTTTCCCGTCGGTGCTaGGATCCCTGGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: DSLPAFAALVSALELSFILSRRC*DPWPQA
Trigger: AGCCTGTGGCCAGGGATCCCAGCACCGACGGGAAAG...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR CCA 90 bp GATACTGAGTTGATCACGACCCTCACTCTTTCAGCCTGCAACATTGAAGCTTTACCTCCGCATTCCTTCTaGGCGGCAGATGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: DTELITTLTLSACNIEALPPHSF*AADAVC
Trigger: ACAAACTGCATCTGCCGCCCAGAAGGAATGCGGAGG...TAAAGCTTCAATGTTGCAGGCTGAAAGAGTGAGGGTCGTGATCAACTCAGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
CDS-3UTR TCA 90 bp CCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGATTCCCCCTTCTTCTTaGCCTTCTTTATCACATCAT +
Preference number: 4 (lower is better)
Translates to: PNHKKTALREWLPSAFLLIPPSS*PSLSHH
Trigger: ATGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAAT...CAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACATTCCCCCTTCTTCTTaGCCTTCTTTATCACATCAT +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSYQHIPPSS*PSLSHH
Trigger: ATGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAAT...GTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTAATCCTCATGCTTAACTaGTCCACCACCAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVILMLN*STTSTF
Trigger: GAAGGTGCTGGTGGTGGATCAGTTAAGCATGAGGAT...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCGCTCTCTGCGCTTATTaGTATCTTCCACAATCGTTA +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDPISALCAY*YLPQSL
Trigger: TAACGATTGTGGAAGATATCAATAAGCGCAGAGAGC...GCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636509.2
CDS-3UTR TCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACGCTCTCTGCGCTTATTaGTATCTTCCACAATCGTTA +
Preference number: 4 (lower is better)
Translates to: LRKSGRISWEGDGERSDDALCAY*YLPQSL
Trigger: TAACGATTGTGGAAGATATCAATAAGCGCAGAGAGC...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637173.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTCTGGACAAGAGTCAGTaGAGAAGACGTGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFLDKSQ*RRRVQP
Trigger: GGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAG...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGCTGGACAAGAGTCAGTaGAGAAGACGTGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: FCIYENSLLFTHVASRILLDKSQ*RRRVQP
Trigger: GGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAG...CAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGAAGCTCTTTCTGGTACTaGGGCATCTTCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGSSFWY*GIFFSI
Trigger: GATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCT...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp CTGATGAGAGAGTGGACGGACTTCTCGGATGGAGTGATGAGATACACAGCCTCCAGATGTAGAGAAGGATaGTGCGGATTTTGTCATAAG +
Preference number: 4 (lower is better)
Translates to: LMREWTDFSDGVMRYTASRCREG*CGFCHK
Trigger: CTTATGACAAAATCCGCATCATCCTTCTCTACATCT...GGAGGCTGTGTATCTCATCACTCCATCCGAGAAGTCCGTCCACTCTCTCATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR TCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTTCAGGTTTTCCTCCGTaGTGCCATTCTTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: SVLRKSGRISWEGDGERSSGFPP*CHSSKR
Trigger: TCTTTTTGAAGAATGGCATCACGGAGGAAAACCTGA...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACATGGGCACGCCGAGGTaGGCCATGTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNMGTPR*AMLVMI
Trigger: GATCATCACCAACATGGCTCACCTCGGCGTGCCCAT...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGTATGACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATGGTAGGTCTGCTCGCTaGTGCGTTCCTTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: CMTPHNTRYYEVSETEDNGRSAR*CVPSAP
Trigger: CGGAGCGGAAGGAACGCATCAGCGAGCAGACCTACC...ATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCTCCATTGTTGGAGCCTaGTCCTCAAAAGATACCCTA +
Preference number: 4 (lower is better)
Translates to: WLSLHCWSLILKRYPRGLSIVGA*SSKDTL
Trigger: TAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGA...GAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCAGTTTCTGTGGGGTaGGGATGTGTGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LRMARQPSCICCFSFCFRAVSVG*GCVWIF
Trigger: AAAGATCCACACACATCCTCACCCCACAGAAACTGC...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR TCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAAGATAGCAGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: EDSRLVLSVKYSKNTDISALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...AGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCTGCTATCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGAAACACGATGATGTATaGCCCCACACAACACAAGGT +
Preference number: 4 (lower is better)
Translates to: KHPNFYRSIPKQCARHPGKHDDV*PHTTQG
Trigger: ACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTT...CCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGGAGAATGAGAGCTGCTaGGTCTTGAGGATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMENESC*VLRMAR
Trigger: TCTCGCCATCCTCAAGACTCAGCAGCTCTCATTCTC...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGTCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 4 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLSRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTCAAGGTCCTGAAGCATaGGCACTGTTTGGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFQGPEA*ALFGPR
Trigger: CCTCGGACCAAACAGTGCTCATGCTTCAGGACCTTG...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGACGACAAACAAGGTCCTaGAGCATGAGCACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: LRMARQPSCICCFSFCFRRQTRS*SMSTVW
Trigger: CCAAACAGTGCTCATGCTTCAGGACCTTGTTTGTCG...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGAGAATGGTACAGAGATaGTATATGTTTGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: HCDLDWRTSLGITALWTQRMVQR*YMFVLQ
Trigger: CTGAAGCACAAACATATATCATCTCTGTACCATTCT...CTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAAGCAGTTTCTGTGGGGTaGGGATGTGTGTGGATCCTA +
Preference number: 4 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQAVSVG*GCVWIL
Trigger: TAGGATCCACACACATCCTCACCCCACAGAAACTGC...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373299.5
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
CDS-3UTR TCA 90 bp TCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAAATGAGCTGTTGACCGGGAAGGGGTGCTaGTTTCTTTATTTATTAGAC +
Preference number: 4 (lower is better)
Translates to: SGPFLTLERRRTRENELLTGKGC*FLYLLD
Trigger: GTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGT...CAACAGCTCATTTTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTAGGCCAGTCACTATCCTaGCTTTGGTATTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLGQSLS*LWYLSF
Trigger: GAATGACAAATACCAAAGTCAGGATAGTGACTGGCC...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGCTGAACTCTGTGGAATaGAGGCTCACTATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRLNSVE*RLTISG
Trigger: ACCACTGATAGTGAGCCTTCATTCCACAGAGTTCAG...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR TCA 90 bp ACTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTCCTCCCTTGAATGGTaGGCTCTTCTCTTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: TNCFSKEMEASSGSLLLTSSLEW*ALLLRF
Trigger: AAACCTCAAGAGAAGAGCTCACCATTCAAGGGAGGA...GGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR GCA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTTTCTTTATCACATCATaGATAATCTTCTCTCCGACA +
Preference number: 4 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSFFITS*IIFSPT
Trigger: TGTCGGAGAGAAGATTATGCATGATGTGATAAAGAA...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637464.2
ENST00000637953.1
CDS-3UTR GCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGAGTGAAGAAGACGTGTaGAGCCCGGTATTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRSEEDV*SPVFSS
Trigger: ACTGCTAAATACCGGGCTGCACACGTCTTCTTCACT...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGGGCACTGTTTCATACGGGAGAAATaGAATATTGATTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: QRDGGFQREFASHLSGHCFIREK*NIDFRQ
Trigger: CTGACGGAAATCAATATTGCATTTCTCCCGTATGAA...ACAGTGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAGACACCTCTGCGATGTaGTTGTGGCGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: SQILNNGEKASIHPNSPEDTSAM*LWRSAI
Trigger: GATAGCACTGCGCCACAAGCACATCGCAGAGGTGTC...TTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TCACGACCCTCACTCTTTCAGCCTGCAACATTGAAGCTTTATATAAATGCACTATTCCTGGGACACCTCTaGGATGTGCTTGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: SRPSLFQPATLKLYINALFLGHL*DVLVAQ
Trigger: CTGCGCCACAAGCACATCGCAGAGGTGTCCCAGGAA...TAGTGCATTTATATAAAGCTTCAATGTTGCAGGCTGAAAGAGTGAGGGTCGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
CDS-3UTR GCA 90 bp TGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGAGTCAGTCCTCAGCAAGGTaGAGGTGGGTGGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: CIYENSLLFTHVASRILSQSSAR*RWVEYL
Trigger: CAAGTACTCCACCCACCTGCACCTTGCTGAGGACTG...ACTCAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCCTCCCTCAGCATCTGTaGCCATGGCCAGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RLVLSVKYSKNTDISMILLPQHL*PWPGPA
Trigger: AGCAGGACCTGGCCATGGGCACAGATGCTGAGGGAG...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGAGTGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CIYENSLLFTHVASRILSGGIWA*WISLFR
Trigger: CCTGAACAAACTGATCCAGCACGCCCAGATACCCCC...ACTCAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTTCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 4 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRASRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATCATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 4 (lower is better)
Translates to: FHTQAMCTSPRVMYKVTNHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACAGCATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 4 (lower is better)
Translates to: FVSNKKRASLNTRMQRQQHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...CTGTTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCGCCTCCACCCACAGCTaGACTACCGGGGGTATGAGA +
Preference number: 4 (lower is better)
Translates to: RLVLSVKYSKNTDISMILASTHS*TTGGMR
Trigger: TCTCATACCCCCGGTAGTGCAGCTGTGGGTGGAGGC...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCCAGCCTTCCTGCATTTaGTGCTTTAGTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIQPSCI*CFSFCF
Trigger: AAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTG...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATGCAGCACAAATGGTGTaGTCACCACTGGAGAATGAG +
Preference number: 4 (lower is better)
Translates to: FHTQAMCTSPRVMYKVTNAAQMV*SPLENE
Trigger: CTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGC...ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTTCTTTATCACATCATaGATAATCTCTCACGCGCCG +
Preference number: 4 (lower is better)
Translates to: FRPKEIRSYKLGGRRGEIFFITS*IISHAP
Trigger: CGGCGCGTGAGAGATTATGCATGATGTGATAAAGAA...GATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR GCA 90 bp TGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCTTCATGCAATACATATaGAAGCAGGGAGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: WLSLHCWSLILKRYPRGLFMQYI*KQGAES
Trigger: GCTCTCTGCTCCCTGCTTGCATATGTATTGCATGAA...GAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTGACGGACTTCTCGGATaGAGTGATGAGATACACAGC +
Preference number: 4 (lower is better)
Translates to: GRQMQFVSLPTFCIYENSDGLLG*SDEIHS
Trigger: GCTGTGTATCTCATCACTCCATCCGAGAAGTCCGTC...ACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp CTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGGATTAAACAGGGCATCTaGACAAGAGTCAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LITRKLRLGSGCPPHSFWIKQGI*TRVSEE
Trigger: TTCTTCACTGACTCTTGTCCAGATGCCCTGTTTAAT...CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATGCCCTCCCCCATTGTTaGATCATCAGCTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: FHTQAMCTSPRVMYKVTNALPHC*IISFIG
Trigger: GCCTATAAAGCTGATGATCCAACAATGGGGGAGGGC...ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGCCTCCCCGATGCCGCTaGTCTCATACTTGTATACAT +
Preference number: 4 (lower is better)
Translates to: MARQPSCICCFSFCFRAKPPRCR*SHTCIH
Trigger: ATGTATACAAGTATGAGACCAGCGGCATCGGGGAGG...CTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTACAGGTCCCGCATGGTaGTCTTCTCTCCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: SVSSSFCGVRMCVDLCFFTGPAW*SSLQYS
Trigger: TGAATACTGGAGAGAAGACCACCATGCGGGACCTGT...AAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp TGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGAGTGGGACAGGTCCCGCATaGTGGTCTTCTCTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: CIYENSLLFTHVASRILSGTGPA*WSSLQY
Trigger: ATACTGGAGAGAAGACCACCATGCGGGACCTGTCCC...ACTCAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCGGTATCTGGGCGTGCTaGATCAGTTTGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFGIWAC*ISLFRF
Trigger: AAACCTGAACAAACTGATCCAGCACGCCCAGATACC...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp GCCAGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACAACTGCGGTACTCGCCTaGGGCCTTGTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: ASHYPDFGICHSHACFHTTAVLA*GLVLMP
Trigger: TGGCATAAGAACAAGGCCCCAGGCGAGTACCGCAGT...TGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCCCTCCCACTTTCCGTTaGCCTGGGTCACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: RLVLSVKYSKNTDISMILPPTFR*PGSPRR
Trigger: CCTACGAGGTGACCCAGGCCAACGGAAAGTGGGAGG...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTCTCTCACTCCATTGTTaGAGCCTGATCCTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPLSLHC*SLILKR
Trigger: TCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp ACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTTTGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: TDISMILNKDRNNPKQGFCGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...AAAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGTGGTGTGCTCACCACTaGAGAATGAGAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMWCAHH*RMRAAE
Trigger: CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCA...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAATGGTGTGCTCACCACTaGAGAATGAGAGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQWCAHH*RMRAAE
Trigger: CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCA...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAATCAGGTCGTATAAGTTaGGAGGGAGACGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQSGRIS*EGDGER
Trigger: TCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGA...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTATAAGATACTCTTTCAGACTGGAGCCCCCTaGACACCGGGAAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: APIAHELLFLGYMYKILFQTGAP*TPGRGA
Trigger: AGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTG...AAAGAGTATCTTATACATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCTGACTAAAGGAAAGCCAGACTaGAGCCCCCTGGACACCGGG +
Preference number: 4 (lower is better)
Translates to: TPHNTRYYEVSETEDNLTKGKPD*SPLDTG
Trigger: CCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTTT...AGTCAGATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637173.2
ENST00000650920.1
CDS-3UTR CCA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGCCCACGGAAGGAGCTTaGAGGCGAGATCTCTTACTA +
Preference number: 4 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMPTEGA*RRDLLL
Trigger: TAGTAAGAGATCTCGCCTCCAAGCTCCTTCCGTGGG...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR CCA 90 bp AGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGCAGGTCCATGGACAGTaGAACCGCACTGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SVKYSKNTDISMILNKDRQVHGQ*NRTGSR
Trigger: TCTGGAGCCAGTGCGGTTCCACTGTCCATGGACCTG...CCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636509.2
CDS-3UTR CCA 90 bp AAAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGCCTGCACATGTATCCTaGGCACACATACCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KNTQISTVPYPSNVHVTQPAHVS*AHIPEV
Trigger: AACCTCAGGTATGTGTGCCCAGGATACATGTGCAGG...CTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR TCA 90 bp GCAATATGTGGTGCTTTTTATGAGGTTTTGAAGTGCCGTGGTTTGCCACGGTTAATCCTCATGCTTAACTaGTCCACCACCAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: AICGAFYEVLKCRGLPRLILMLN*STTSTF
Trigger: GAAGGTGCTGGTGGTGGATCAGTTAAGCATGAGGAT...TAACCGTGGCAAACCACGGCACTTCAAAACCTCATAAAAAGCACCACATATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp CAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATCTTAAATAACGGGTTATGCCCTCGGTCATaGTGTCTGTCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: QCARHPGLCTRSQILNNGLCPRS*CLSSCS
Trigger: GCTGCAAGATGACAGACATCATGACCGAGGGCATAA...CCCGTTATTTAAGATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAATTATGCCCTCGGTCATaGTGTCTGTCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQLCPRS*CLSSCS
Trigger: GCTGCAAGATGACAGACATCATGACCGAGGGCATAA...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCGCTCTCTGCGCTTATTaGTATCTTCCACAATCGTTA +
Preference number: 4 (lower is better)
Translates to: WLSLHCWSLILKRYPRGLALCAY*YLPQSL
Trigger: TAACGATTGTGGAAGATATCAATAAGCGCAGAGAGC...GAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp CACCGGGAAGGGGTGCTGATTTCTTTATTTATTAGACTCAAGTGCTTTAGTACACTGGACAAGAGTCAGTaGAGAAGACGTGTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: HREGVLISLFIRLKCFSTLDKSQ*RRRVQP
Trigger: GGGCTGCACACGTCTTCTTCACTGACTCTTGTCCAG...TGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACTTGTCCTGGATTAGCTaGGCCAGCAGGGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNLSWIS*ASRALS
Trigger: GGACAATGCCCTGCTGGCTCAGCTAATCCAGGACAA...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTAGCTCTTTCTGGTACTaGGGCATCTTCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: SVSSSFCGVRMCVDLCFFSSFWY*GIFFSI
Trigger: GATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCT...AAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp TTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACAGAGCTCTTTCTGGTACTaGGGCATCTTCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: FVSNKKRASLNTRMQRQQSSFWY*GIFFSI
Trigger: GATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCT...CTGTTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCGGGTGGAGTACTTGCTaGGCTCTTTCTGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: LPTFCIYENSLLFTHVASGWSTC*ALSGTE
Trigger: CTCAGTACCAGAAAGAGCTCAGCAAGTACTCCACCC...GGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp TCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAGGGTGGAGTACTTGCTaGGCTCTTTCTGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: SQILNNGEKASIHPNSPEGWSTC*ALSGTE
Trigger: CTCAGTACCAGAAAGAGCTCAGCAAGTACTCCACCC...TTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGTTTTGTCATAAGTGCTaGCATTGGCATCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQFCHKC*HWHPAE
Trigger: TTCTGCTGGATGCCAATGTCAGCACTTATGACAAAA...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGGCTTCAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTTTTTGTCATAAGTGCTaGCATTGGCATCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: RLQMYLITRKLRLGSGCPFCHKC*HWHPAE
Trigger: TTCTGCTGGATGCCAATGTCAGCACTTATGACAAAA...AGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTGAAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp GCTTTGGAAAGAGTCAGCAGAGTCCAAGGAATAGACCTGGGATTCATACGGGAGTTTTGTCATAAGTGCTaGCATTGGCATCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: ALERVSRVQGIDLGFIREFCHKC*HWHPAE
Trigger: TTCTGCTGGATGCCAATGTCAGCACTTATGACAAAA...CTCCCGTATGAATCCCAGGTCTATTCCTTGGACTCTGCTGACTCTTTCCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGTCAGGTTTTCCTCCGTaGTGCCATTCTTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRSGFPP*CHSSKR
Trigger: TCTTTTTGAAGAATGGCATCACGGAGGAAAACCTGA...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTCCATTGTTGGAGCCTaGTCCTCAAAAGATACCCTA +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLSIVGA*SSKDTL
Trigger: TAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGA...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAGAAGAGGGCATCACTaGACACGAGAATGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPRRGHH*TRECSG
Trigger: GCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCT...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAAATGAGCTGTTGTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: SGPFLTLERRRTRENELLCTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...CAACAGCTCATTTTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAACCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AATTTCTCCTGCTGTGCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGAATGAGCTGTTGGGATaGTGCCTGGGGACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: NFSCCAPIAHELLFLGYMNELLG*CLGTEG
Trigger: CCCTTCTGTCCCCAGGCATCATCCCAACAGCTCATT...CATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCACAGCAGGAGAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAATGAGCTGTTGGGATaGTGCCTGGGGACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNNELLG*CLGTEG
Trigger: CCCTTCTGTCCCCAGGCATCATCCCAACAGCTCATT...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGAAACACGATGATGTATaGCCCCACACAACACAAGGT +
Preference number: 4 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRKHDDV*PHTTQG
Trigger: ACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTT...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCAAACACGATGATGTATaGCCCCACACAACACAAGGT +
Preference number: 4 (lower is better)
Translates to: TNCFSKEMEASSGSLLLTKHDDV*PHTTQG
Trigger: ACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTT...GGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCTCTTACAAACACGATaGTGTATGACCCCACACAAC +
Preference number: 4 (lower is better)
Translates to: CVQQFLWGEDVCGSLFLWLLQTR*CMTPHN
Trigger: GTTGTGTGGGGTCATACATCATCGTGTTTGTAAGAG...CCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR TCA 90 bp TCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAGAGAATGAGAGCTGCTaGGTCTTGAGGATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: SQILNNGEKASIHPNSPEENESC*VLRMAR
Trigger: TCTCGCCATCCTCAAGACTCAGCAGCTCTCATTCTC...TTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAGCAGTTTCTGTGGGGTaGGGATGTGTGTGGATCCTA +
Preference number: 4 (lower is better)
Translates to: SQILNNGEKASIHPNSPEAVSVG*GCVWIL
Trigger: TAGGATCCACACACATCCTCACCCCACAGAAACTGC...TTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373299.5
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
CDS-3UTR TCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTGCAGTTTCTGTGGGGTaGGGATGTGTGTGGATCCTA +
Preference number: 4 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFAVSVG*GCVWIL
Trigger: TAGGATCCACACACATCCTCACCCCACAGAAACTGC...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373299.5
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
CDS-3UTR TCA 90 bp TCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAAATGAGCTGTTGATTTACAGTCCAGTCTaGGAAAGAAGGAATTACACC +
Preference number: 4 (lower is better)
Translates to: SGPFLTLERRRTRENELLIYSPV*ERRNYT
Trigger: GGTGTAATTCCTTCTTTCTCAGACTGGACTGTAAAT...CAACAGCTCATTTTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637173.2
ENST00000650920.1
CDS-3UTR TCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTGTGGGAGTAAGAATGTaGGTAGAACTACATTCATGC +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPVGVRM*VELHSC
Trigger: GCATGAATGTAGTTCTACTCACATTCTTACTCCCAC...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACTTCATACGGGAGAAATaGAATATTGATTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSYQHFIREK*NIDFRQ
Trigger: CTGACGGAAATCAATATTGCATTTCTCCCGTATGAA...GTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR GCA 90 bp AGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACATTTCAAAGGGTCGCGATCTaGTCTGCCAGGCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SHYPDFGICHSHACFHTFQRVAI*SARRSS
Trigger: ACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTG...AAATGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp CATGTTGACATATGCAACTGTGTGTCATGCATTTTTAACTGCTTTAAACTCACCCCCGTGCCTCCCCGATaGCGCTGGTCTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: HVDICNCVSCIFNCFKLTPVPPR*RWSHTC
Trigger: ACAAGTATGAGACCAGCGGCATCGGGGAGGCACGGG...GGTGAGTTTAAAGCAGTTAAAAATGCATGACACACAGTTGCATATGTCAACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636962.2
CDS-3UTR GCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTGACACCTCTGCGATGTaGTTGTGGCGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPDTSAM*LWRSAI
Trigger: GATAGCACTGCGCCACAAGCACATCGCAGAGGTGTC...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGGACACCTCTGCGATGTaGTTGTGGCGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: SVKYSKNTDISMILNKDRDTSAM*LWRSAI
Trigger: GATAGCACTGCGCCACAAGCACATCGCAGAGGTGTC...CCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGACACCTCTGCGATGTaGTTGTGGCGCAGTGCTATC +
Preference number: 4 (lower is better)
Translates to: KNTDISMILNKDRNNPKQDTSAM*LWRSAI
Trigger: GATAGCACTGCGCCACAAGCACATCGCAGAGGTGTC...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAACAGTCCTCAGCAAGGTaGAGGTGGGTGGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: KNTDISMILNKDRNNPKQQSSAR*RWVEYL
Trigger: CAAGTACTCCACCCACCTGCACCTTGCTGAGGACTG...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACCAGTCCTCAGCAAGGTaGAGGTGGGTGGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNQSSAR*RWVEYL
Trigger: CAAGTACTCCACCCACCTGCACCTTGCTGAGGACTG...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQRVCLR*LGNASY
Trigger: GTATGAAGCATTACCAAGGCACCGTAGACAAACTCT...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPRVCLR*LGNASY
Trigger: GTATGAAGCATTACCAAGGCACCGTAGACAAACTCT...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: KNTDISMILNKDRNNPKQGGIWA*WISLFR
Trigger: CCTGAACAAACTGATCCAGCACGCCCAGATACCCCC...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNGGIWA*WISLFR
Trigger: CCTGAACAAACTGATCCAGCACGCCCAGATACCCCC...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTGACGACCCTTCCTGCATTTGCTaGTTTAGTTTCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: LRKSGRISWEGDGERSDDPSCIC*FSFCFR
Trigger: TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGG...GTCGTCAGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGCAGCCTTCCTGCATTTaGTGCTTTAGTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KHPNFYRSIPKQCARHPGQPSCI*CFSFCF
Trigger: AAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTG...CCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAATACACACATGGCCTaGAGGAGGTCAAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RLVLSVKYSKNTDISMILNTHMA*RRSRAA
Trigger: CGCCGCCCTTGACCTCCTGCAGGCCATGTGTGTATT...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCTGACTAATACACACATGGCCTaGAGGAGGTCAAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: TPHNTRYYEVSETEDNLTNTHMA*RRSRAA
Trigger: CGCCGCCCTTGACCTCCTGCAGGCCATGTGTGTATT...AGTCAGATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGGTGCAGTTTGTCAGTTTaGCAACATTCTGCATTTATG +
Preference number: 4 (lower is better)
Translates to: LITRKLRLGSGCPPHSFWCSLSV*QHSAFM
Trigger: CATAAATGCAGAATGTTGGCAAACTGACAAACTGCA...CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp TTATTTTCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCTCCCTCAGCATCTGTaGCCATGGCCAGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: LFSFVSNKKRASLNTRMQLPQHL*PWPGPW
Trigger: CCATGGACCTGGCCATGGGCACAGATGCTGAGGGAG...CTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636509.2
CDS-3UTR CCA 90 bp TCATCATCATCATCATCATCATCATCATCAATGGCTGAGCCCTCACTGTGCTTCGACGGACTTCTCGGATaGAGTGATGAGATACACAGC +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSSMAEPSLCFDGLLG*SDEIHS
Trigger: GCTGTGTATCTCATCACTCCATCCGAGAAGTCCGTC...GAAGCACAGTGAGGGCTCAGCCATTGATGATGATGATGATGATGATGATGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGACGGACTTCTCGGATaGAGTGATGAGATACACAGC +
Preference number: 4 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRDGLLG*SDEIHS
Trigger: GCTGTGTATCTCATCACTCCATCCGAGAAGTCCGTC...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp GAGCAGGCACTGAGGGGTAGGGACTGGAATGAAGATAGCAGATTAGTCCTCAGTATTAAACAGGGCATCTaGACAAGAGTCAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: EQALRGRDWNEDSRLVLSIKQGI*TRVSEE
Trigger: TTCTTCACTGACTCTTGTCCAGATGCCCTGTTTAAT...ACTGAGGACTAATCTGCTATCTTCATTCCAGTCCCTACCCCTCAGTGCCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTCTGCGATGTGCTTGTaGCGCAGTGCTATCCACAGG +
Preference number: 4 (lower is better)
Translates to: QMQFVSLPTFCIYENSLLSAMCL*RSAIHR
Trigger: CCTGTGGATAGCACTGCGCCACAAGCACATCGCAGA...CAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTAGACCGGGTGACTTCCTaGGACACCTCTGCGATGTGC +
Preference number: 4 (lower is better)
Translates to: CSLSVCQHSAFMRTVCCLDRVTS*DTSAMC
Trigger: GCACATCGCAGAGGTGTCCCAGGAAGTCACCCGGTC...TAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAACAGGTCCCGCATGGTaGTCTTCTCTCCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRTGPAW*SSLQYS
Trigger: TGAATACTGGAGAGAAGACCACCATGCGGGACCTGT...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTGGGACAGGTCCCGCATaGTGGTCTTCTCTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPGTGPA*WSSLQY
Trigger: ATACTGGAGAGAAGACCACCATGCGGGACCTGTCCC...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTTCAGCAAGGTGCAGGTaGGTGGAGTACTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPSARCR*VEYLLS
Trigger: GCTCAGCAAGTACTCCACCCACCTGCACCTTGCTGA...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAGCATCTGTGCCCATaGCCAGGTCCTGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: ISPQCEILQEHRHLYDSQQHLCP*PGPAPL
Trigger: GAGTGGAGCAGGACCTGGCCATGGGCACAGATGCTG...TTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATGGTATCTGGGCGTGCTaGATCAGTTTGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: FHTQAMCTSPRVMYKVTNGIWAC*ISLFRF
Trigger: AAACCTGAACAAACTGATCCAGCACGCCCAGATACC...ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTGGTATCTGGGCGTGCTaGATCAGTTTGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: GRQMQFVSLPTFCIYENSGIWAC*ISLFRF
Trigger: AAACCTGAACAAACTGATCCAGCACGCCCAGATACC...ACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp CGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACAGGTATCTGGGCGTGCTaGATCAGTTTGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RPFILTVQKFLLLCTNCTGIWAC*ISLFRF
Trigger: AAACCTGAACAAACTGATCCAGCACGCCCAGATACC...TGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTCTCTCACTCCATTGTTaGAGCCTGATCCTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLLSLHC*SLILKR
Trigger: TCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNGGMRR*ERQRGL
Trigger: CAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCC...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATATGTGGAGGAGGACGCTaGCCTGACTTCGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: DSLPAFAALVSALELSFICGGGR*PDFVQT
Trigger: TGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACA...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTAGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTT +
Preference number: 4 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVVFPKR*RLPAGV
Trigger: AACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAAC...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTT +
Preference number: 4 (lower is better)
Translates to: LRMARQPSCICCFSFCFRVFPKR*RLPAGV
Trigger: AACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAAC...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR CAA 72 bp ATTCTTCATCTGAGCCTTGTGGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTCCAAGGAATAGACCTG +
Preference number: 4 (lower is better)
Translates to: ILHLSLVGTVEA*ERVSRVQGIDL
Trigger: CAGGTCTATTCCTTGGACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCCCACAAGGCTCAGATGAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
3UTR CAA 72 bp CGCATTCCTTCTGGGCGGCAGATGCAGTTTGTCAGTTaGCCAACATTCTGCATTTATGAGAACAGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: RIPSGRQMQFVS*PTFCIYENSLL
Trigger: CAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAGGAATGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR CAA 72 bp TTTGCTGTTTACCCATGTAGCCTCCAGGATACTGAGTaGATCACGACCCTCACTCTTTCAGCCTGCAACATT +
Preference number: 4 (lower is better)
Translates to: FAVYPCSLQDTE*ITTLTLSACNI
Trigger: AATGTTGCAGGCTGAAAGAGTGAGGGTCGTGATCAACTCAGTATCCTGGAGGCTACATGGGTAAACAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
CDS-3UTR TCA 90 bp GGGAGCGGCTCTCTGCGCTTATTGATATCTTCCACAACATGTGATCCAGCAATCATTCCCCCTTCTTCTTaGCCTTCTTTATCACATCAT +
Preference number: 4 (lower is better)
Translates to: GSGSLRLLISSTTCDPAIIPPSS*PSLSHH
Trigger: ATGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAAT...GATTGCTGGATCACATGTTGTGGAAGATATCAATAAGCGCAGAGAGCCGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR TCA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCATTCCCCCTTCTTCTTaGCCTTCTTTATCACATCAT +
Preference number: 4 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGIPPSS*PSLSHH
Trigger: ATGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAAT...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTGCTCTCTGCGCTTATTaGTATCTTCCACAATCGTTA +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLALCAY*YLPQSL
Trigger: TAACGATTGTGGAAGATATCAATAAGCGCAGAGAGC...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAAGCTCTTTCTGGTACTaGGGCATCTTCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQSSFWY*GIFFSI
Trigger: GATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCT...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGGTGGAGTACTTGCTaGGCTCTTTCTGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: KNTDISMILNKDRNNPKQGWSTC*ALSGTE
Trigger: CTCAGTACCAGAAAGAGCTCAGCAAGTACTCCACCC...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTGGGTGGAGTACTTGCTaGGCTCTTTCTGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPGWSTC*ALSGTE
Trigger: CTCAGTACCAGAAAGAGCTCAGCAAGTACTCCACCC...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGTTTTGTCATAAGTGCTaGCATTGGCATCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRFCHKC*HWHPAE
Trigger: TTCTGCTGGATGCCAATGTCAGCACTTATGACAAAA...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTTTTGTCATAAGTGCTaGCATTGGCATCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLFCHKC*HWHPAE
Trigger: TTCTGCTGGATGCCAATGTCAGCACTTATGACAAAA...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGATTTTGTCATAAGTGCTaGCATTGGCATCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGFCHKC*HWHPAE
Trigger: TTCTGCTGGATGCCAATGTCAGCACTTATGACAAAA...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTAGATGTAGAGAAGGATaGTGCGGATTTTGTCATAAG +
Preference number: 4 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPRCREG*CGFCHK
Trigger: CTTATGACAAAATCCGCATCATCCTTCTCTACATCT...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp ACTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTCAGGTTTTCCTCCGTaGTGCCATTCTTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: TNCFSKEMEASSGSLLLTSGFPP*CHSSKR
Trigger: TCTTTTTGAAGAATGGCATCACGGAGGAAAACCTGA...GGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGTCAGGTTTTCCTCCGTaGTGCCATTCTTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: CVQQFLWGEDVCGSLFLWSGFPP*CHSSKR
Trigger: TCTTTTTGAAGAATGGCATCACGGAGGAAAACCTGA...CCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGATCAGGTTTTCCTCCGTaGTGCCATTCTTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGSGFPP*CHSSKR
Trigger: TCTTTTTGAAGAATGGCATCACGGAGGAAAACCTGA...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR TCA 90 bp AGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACATTTATGGGCACGCCGAGGTaGGCCATGTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: SHYPDFGICHSHACFHTFMGTPR*AMLVMI
Trigger: GATCATCACCAACATGGCTCACCTCGGCGTGCCCAT...AAATGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp ATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAAATGGGCACGCCGAGGTaGGCCATGTTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: ISPQCEILQEHRHLYDSQMGTPR*AMLVMI
Trigger: GATCATCACCAACATGGCTCACCTCGGCGTGCCCAT...TTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTATCCATTGTTGGAGCCTaGTCCTCAAAAGATACCCTA +
Preference number: 4 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVSIVGA*SSKDTL
Trigger: TAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGA...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR TCA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQCTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: PKFLPFHTQAMCTSPRVMCTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...CATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRCTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: TNCFSKEMEASSGSLLLTTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...GGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAAGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 4 (lower is better)
Translates to: ISPQCEILQEHRHLYDSQDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...TTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTATTTTCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LFSFVSNKKRASLNTRMQALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...CTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGAAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAAGCACTACCGGGGGTATaGGACGCTGGGAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: ISPQCEILQEHRHLYDSQALPGV*DAGKGK
Trigger: TTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGC...TTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTATTTTCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGGGTACAGGGTCTGTGTaGGTCCAACGGGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LFSFVSNKKRASLNTRMQGTGSV*VQRAKN
Trigger: GTTCTTGGCCCGTTGGACTCACACAGACCCTGTACC...CTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATCTCTTACAAACACGATaGTGTATGACCCCACACAAC +
Preference number: 4 (lower is better)
Translates to: FHTQAMCTSPRVMYKVTNLLQTR*CMTPHN
Trigger: GTTGTGTGGGGTCATACATCATCGTGTTTGTAAGAG...ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACAGCTCTTACAAACACGATaGTGTATGACCCCACACAAC +
Preference number: 4 (lower is better)
Translates to: FVSNKKRASLNTRMQRQQLLQTR*CMTPHN
Trigger: GTTGTGTGGGGTCATACATCATCGTGTTTGTAAGAG...CTGTTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACTCTTACAAACACGATaGTGTATGACCCCACACAAC +
Preference number: 4 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVLLQTR*CMTPHN
Trigger: GTTGTGTGGGGTCATACATCATCGTGTTTGTAAGAG...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCTGACTAGAGCTGCTGAGTCTTaGGGATGGCGAGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: TPHNTRYYEVSETEDNLTRAAES*GWRDSL
Trigger: AAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCT...AGTCAGATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTGAGAATGAGAGCTGCTaGGTCTTGAGGATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPENESC*VLRMAR
Trigger: TCTCGCCATCCTCAAGACTCAGCAGCTCTCATTCTC...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATACAAGGTCCTGAAGCATaGGCACTGTTTGGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: DSLPAFAALVSALELSFIQGPEA*ALFGPR
Trigger: CCTCGGACCAAACAGTGCTCATGCTTCAGGACCTTG...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTGTAAAATGGTACAGCTaGTGTGGAAAACAGGCCGGC +
Preference number: 4 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFVKWYS*CGKQAG
Trigger: GCCGGCCTGTTTTCCACATCAGCTGTACCATTTTAC...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000637173.2
ENST00000650920.1
CDS-3UTR TCA 90 bp ATTCTTTTCTCCCCAGGCTTGGCTTGGACTCATCGTCAACAGCAGCAGCATCATGAGATCTATTCATGTTaGCATATGCAACTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: ILFSPGLAWTHRQQQQHHEIYSC*HMQLCV
Trigger: GACACACAGTTGCATATGTCAACATGAATAGATCTC...ATGATGCTGCTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636962.2
CDS-3UTR GCA 90 bp GAGCAGGCACTGAGGGGTAGGGACTGGAATGAAGATAGCAGATTAGTCCTCAGTTTCATACGGGAGAAATaGAATATTGATTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: EQALRGRDWNEDSRLVLSFIREK*NIDFRQ
Trigger: CTGACGGAAATCAATATTGCATTTCTCCCGTATGAA...ACTGAGGACTAATCTGCTATCTTCATTCCAGTCCCTACCCCTCAGTGCCTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAGGCTTCAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTTCATACGGGAGAAATaGAATATTGATTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: QASDVPNHKKTALREWLPFIREK*NIDFRQ
Trigger: CTGACGGAAATCAATATTGCATTTCTCCCGTATGAA...GGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTGAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp AGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACATTTGTGCTTGTGGCGCAGTaGTATCCACAGGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: SHYPDFGICHSHACFHTFVLVAQ*YPQVVV
Trigger: GACGACGACCTGTGGATAGCACTGCGCCACAAGCAC...AAATGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLRVCLR*LGNASY
Trigger: GTATGAAGCATTACCAAGGCACCGTAGACAAACTCT...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp CATTGGGTGAATACACAGTTTATCTGTTCTCTTCTTGATGAGCATTGGGCTTTTGGGGGTATCTGGGCGTaGTGGATCAGTTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: HWVNTQFICSLLDEHWAFGGIWA*WISLFR
Trigger: CCTGAACAAACTGATCCAGCACGCCCAGATACCCCC...AAAAGCCCAATGCTCATCAAGAAGAGAACAGATAAACTGTGTATTCACCCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATACTTCCAGCGGGAGTTTaGTTCTCACCTGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: DSLPAFAALVSALELSFILPAGV*FSPVRA
Trigger: TGCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAG...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTCTGACTGAAGATGCTTaGCGAGAGGGTACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPLTEDA*REGTGS
Trigger: AGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAG...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAACTGACTGAAGATGCTTaGCGAGAGGGTACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: KNTDISMILNKDRNNPKQLTEDA*REGTGS
Trigger: AGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAG...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGCAGCCTTCCTGCATTTaGTGCTTTAGTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KTPKFLPFHTQAMCTSPRQPSCI*CFSFCF
Trigger: AAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTG...CCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTCAGCCTTCCTGCATTTaGTGCTTTAGTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLQPSCI*CFSFCF
Trigger: AAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTG...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR GCA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGGCGAGACAGCCTTCCTaGATTTGCTGCTTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMARQPS*ICCFSF
Trigger: GAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGC...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATAAAGAGAACACCACAATaGAGCGAGCAGAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: DSLPAFAALVSALELSFIKRTPQ*SEQRGR
Trigger: CCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTT...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTTCTTTATCACATCATaGATAATCTCTGCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLFFITS*IISAAQ
Trigger: CTGGGCCGCAGAGATTATGCATGATGTGATAAAGAA...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637521.2
CDS-3UTR CCA 90 bp TTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGTCACTGATGAGAGAGTaGACGGACTTCTCGGATGGA +
Preference number: 4 (lower is better)
Translates to: FCIYENSLLFTHVASRILSLMRE*TDFSDG
Trigger: TCCATCCGAGAAGTCCGTCCACTCTCTCATCAGTGA...CAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp AGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: RCSLSVCQHSAFMRTVCCGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...ACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp GCCAGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACAGCCCTCCCCCATTGTTaGATCATCAGCTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: ASHYPDFGICHSHACFHTALPHC*IISFIG
Trigger: GCCTATAAAGCTGATGATCCAACAATGGGGGAGGGC...TGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTGCCCTCCCCCATTGTTaGATCATCAGCTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFALPHC*IISFIG
Trigger: GCCTATAAAGCTGATGATCCAACAATGGGGGAGGGC...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTATCTTCTTCAGCATCTaGGACAGGTCCCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPIFFSI*DRSRMV
Trigger: CACCATGCGGGACCTGTCCCAGATGCTGAAGAAGAT...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGATCTTCTTCAGCATCTaGGACAGGTCCCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: VLSVKYSKNTDISMILNKIFFSI*DRSRMV
Trigger: CACCATGCGGGACCTGTCCCAGATGCTGAAGAAGAT...CTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCACTGCGGTACTCGCCTaGGGCCTTGTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: RLVLSVKYSKNTDISMILTAVLA*GLVLMP
Trigger: TGGCATAAGAACAAGGCCCCAGGCGAGTACCGCAGT...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: VLSVKYSKNTDISMILNKVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...CTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTTGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: TDISMILNKDRNNPKQGFVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...AAAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCGGGGGTATGAGACGCTaGGAAAGGCAAAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RLVLSVKYSKNTDISMILGGMRR*ERQRGL
Trigger: CAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCC...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGCAGCAGCAGCACAAATaGTGTGCTCACCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: VLSVKYSKNTDISMILNKQQQHK*CAHHWR
Trigger: TCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTG...CTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACCAGCAGCAGCACAAATaGTGTGCTCACCACTGGAGA +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNQQQHK*CAHHWR
Trigger: TCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTG...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AATTTCTCCTGCTGTGCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTCAGGTCGTATAAGTTaGGAGGGAGACGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: NFSCCAPIAHELLFLGYMSGRIS*EGDGER
Trigger: TCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGA...CATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCACAGCAGGAGAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GAAGATAGCAGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTTCAGGTCGTATAAGTTaGGAGGGAGACGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EDSRLVLSVKYSKNTDISSGRIS*EGDGER
Trigger: TCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGA...AGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCTGCTATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGCCAAGACAAGCTCCATaGCTAGTCCCCAGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: VLSVKYSKNTDISMILNKPRQAP*LVPSVR
Trigger: CCTTACACTGGGGACTAGCCATGGAGCTTGTCTTGG...CTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637173.2
CDS-3UTR CCA 90 bp AGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTCCCCAGGCTTGGCTTaGACTCATCGTCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: RCSLSVCQHSAFMRTVCCSPGLA*THRQQQ
Trigger: CTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGA...ACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTGCCCTTTGTATTTACTaGGTAGAAAGAGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GRQMQFVSLPTFCIYENSALCIY*VERAGK
Trigger: CTTCCCTGCTCTTTCTACCCAGTAAATACAAAGGGC...ACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp TTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGGGTTTTGAAGTGCCGTaGTTTGCCACGGTTACTACG +
Preference number: 4 (lower is better)
Translates to: FCIYENSLLFTHVASRILGFEVP*FATVTT
Trigger: CGTAGTAACCGTGGCAAACCACGGCACTTCAAAACC...CAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR CAA 72 bp GGCTCACTATCAGTGGTCTTTCGTGTCTTGCTGTCTTaGCTCACCGTTGTTCATCAGATGCATTCATGTTAC +
Preference number: 4 (lower is better)
Translates to: GSLSVVFRVLLS*LTVVHQMHSCY
Trigger: GTAACATGAATGCATCTGATGAACAACGGTGAGCAAAGACAGCAAGACACGAAAGACCACTGATAGTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR TCA 90 bp AGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTATTCCCCCTTCTTCTTaGCCTTCTTTATCACATCAT +
Preference number: 4 (lower is better)
Translates to: RMARQPSCICCFSFCFRAIPPSS*PSLSHH
Trigger: ATGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAAT...AGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGATTCCCCCTTCTTCTTaGCCTTCTTTATCACATCAT +
Preference number: 4 (lower is better)
Translates to: ITGRRRPFILTVQKFLLLIPPSS*PSLSHH
Trigger: ATGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAAT...CAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGATTCCCCCTTCTTCTTaGCCTTCTTTATCACATCAT +
Preference number: 4 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLIPPSS*PSLSHH
Trigger: ATGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAAT...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTATCCTCATGCTTAACTaGTCCACCACCAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPILMLN*STTSTF
Trigger: GAAGGTGCTGGTGGTGGATCAGTTAAGCATGAGGAT...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACCGGGAAGGGGTGCTGATTTCTTTATTTATTAGACTCAAGTGCTTTAGTACAATCCTCATGCTTAACTaGTCCACCACCAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: HREGVLISLFIRLKCFSTILMLN*STTSTF
Trigger: GAAGGTGCTGGTGGTGGATCAGTTAAGCATGAGGAT...TGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACTTATGCCCTCGGTCATaGTGTCTGTCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNLCPRS*CLSSCS
Trigger: GCTGCAAGATGACAGACATCATGACCGAGGGCATAA...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTCTCTGCGCTTATTaGTATCTTCCACAATCGTTA +
Preference number: 4 (lower is better)
Translates to: LRMARQPSCICCFSFCFRALCAY*YLPQSL
Trigger: TAACGATTGTGGAAGATATCAATAAGCGCAGAGAGC...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637173.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATGCTCTCTGCGCTTATTaGTATCTTCCACAATCGTTA +
Preference number: 4 (lower is better)
Translates to: FHTQAMCTSPRVMYKVTNALCAY*YLPQSL
Trigger: TAACGATTGTGGAAGATATCAATAAGCGCAGAGAGC...ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637173.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTGCTCTCTGCGCTTATTaGTATCTTCCACAATCGTTA +
Preference number: 4 (lower is better)
Translates to: GRQMQFVSLPTFCIYENSALCAY*YLPQSL
Trigger: TAACGATTGTGGAAGATATCAATAAGCGCAGAGAGC...ACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp TGTATGACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATTTGTCCTGGATTAGCTaGGCCAGCAGGGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: CMTPHNTRYYEVSETEDNLSWIS*ASRALS
Trigger: GGACAATGCCCTGCTGGCTCAGCTAATCCAGGACAA...ATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTGGGTGGAGTACTTGCTaGGCTCTTTCTGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: RCSLSVCQHSAFMRTVCCGWSTC*ALSGTE
Trigger: CTCAGTACCAGAAAGAGCTCAGCAAGTACTCCACCC...ACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCGGGTGGAGTACTTGCTaGGCTCTTTCTGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: RLVLSVKYSKNTDISMILGWSTC*ALSGTE
Trigger: CTCAGTACCAGAAAGAGCTCAGCAAGTACTCCACCC...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGAGATGTAGAGAAGGATaGTGCGGATTTTGTCATAAG +
Preference number: 4 (lower is better)
Translates to: CVQQFLWGEDVCGSLFLWRCREG*CGFCHK
Trigger: CTTATGACAAAATCCGCATCATCCTTCTCTACATCT...CCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR TCA 90 bp TTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACAGACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: FVSNKKRASLNTRMQRQQTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...CTGTTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAACACAGACATCTCTATaGTTCTCAACAAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: LRMARQPSCICCFSFCFRTQTSL*FSTRTG
Trigger: TCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGT...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTATAAGATACTCTTTGATGAGAGCAGGCACTaGGGGGTAGGGACTGGAATG +
Preference number: 4 (lower is better)
Translates to: APIAHELLFLGYMYKILFDESRH*GVGTGM
Trigger: CATTCCAGTCCCTACCCCTCAGTGCCTGCTCTCATC...AAAGAGTATCTTATACATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAACCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: KNTDISMILNKDRNNPKQPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTATTTTCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGAATGAGCTGTTGGGATaGTGCCTGGGGACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LFSFVSNKKRASLNTRMQNELLG*CLGTEG
Trigger: CCCTTCTGTCCCCAGGCATCATCCCAACAGCTCATT...CTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATCTTAAATAACGGGAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: QCARHPGLCTRSQILNNGKLRII*LKMLAE
Trigger: CTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTT...CCCGTTATTTAAGATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACTCTTACAAACACGATaGTGTATGACCCCACACAAC +
Preference number: 4 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQLLQTR*CMTPHN
Trigger: GTTGTGTGGGGTCATACATCATCGTGTTTGTAAGAG...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAAAGAGCTGCTGAGTCTTaGGGATGGCGAGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: ISPQCEILQEHRHLYDSQRAAES*GWRDSL
Trigger: AAGGCTGTCTCGCCATCCTCAAGACTCAGCAGCTCT...TTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCGAGAATGAGAGCTGCTaGGTCTTGAGGATGGCGAGA +
Preference number: 4 (lower is better)
Translates to: RLVLSVKYSKNTDISMILENESC*VLRMAR
Trigger: TCTCGCCATCCTCAAGACTCAGCAGCTCTCATTCTC...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAGACGGGGAGAGATCTaGCGACTAATCTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPRRGEI*RLISVQ
Trigger: TTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCT...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATACCGGGAAGGGGTGCTaGTTTCTTTATTTATTAGAC +
Preference number: 4 (lower is better)
Translates to: FHTQAMCTSPRVMYKVTNTGKGC*FLYLLD
Trigger: GTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGT...ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CATTGGGTGAATACACAGTTTATCTGTTCTCTTCTTGATGAGCATTGGGCTTTTACTCCCTGCTTCTACTaGGCAAAAGCAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: HWVNTQFICSLLDEHWAFTPCFY*AKAAAL
Trigger: CAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGT...AAAAGCCCAATGCTCATCAAGAAGAGAACAGATAAACTGTGTATTCACCCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp TTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCTACTACGGGACTGAATaGAGGAGGATGAACGCAGAA +
Preference number: 4 (lower is better)
Translates to: LPTFCIYENSLLFTHVASYYGTE*RRMNAE
Trigger: TTCTGCGTTCATCCTCCTTCATTCAGTCCCGTAGTA...GGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp GATACTGAGTTGATCACGACCCTCACTCTTTCAGCCTGCAACATTGAAGCTTTAATGTGGTGCTTTTTATaGGGTTTTGAAGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: DTELITTLTLSACNIEALMWCFL*GFEVPW
Trigger: CCACGGCACTTCAAAACCTCATAAAAAGCACCACAT...TAAAGCTTCAATGTTGCAGGCTGAAAGAGTGAGGGTCGTGATCAACTCAGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636962.2
CDS-3UTR GCA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTTTCTTTATCACATCATaGATAATCTTCTCTCCGACA +
Preference number: 4 (lower is better)
Translates to: SVLRKSGRISWEGDGERSFFITS*IIFSPT
Trigger: TGTCGGAGAGAAGATTATGCATGATGTGATAAAGAA...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637464.2
ENST00000637953.1
CDS-3UTR GCA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTATTCATACGGGAGAAATaGAATATTGATTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLFIREK*NIDFRQ
Trigger: CTGACGGAAATCAATATTGCATTTCTCCCGTATGAA...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCTTCATACGGGAGAAATaGAATATTGATTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGFIREK*NIDFRQ
Trigger: CTGACGGAAATCAATATTGCATTTCTCCCGTATGAA...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp GAAGATAGCAGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTCATACCCAAGCAATGTaGACGTCACCCAGGGTTATG +
Preference number: 4 (lower is better)
Translates to: EDSRLVLSVKYSKNTDISHTQAM*TSPRVM
Trigger: CATAACCCTGGGTGACGTGCACATTGCTTGGGTATG...AGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCTGCTATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AATTTCTCCTGCTGTGCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGGCAGCACAAATGGTGTaGTCACCACTGGAGAATGAG +
Preference number: 4 (lower is better)
Translates to: NFSCCAPIAHELLFLGYMAAQMV*SPLENE
Trigger: CTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGC...CATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCACAGCAGGAGAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCGTAGAACTACATTCATaGAATACATATGCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: WLSLHCWSLILKRYPRGLVELHS*NTYASR
Trigger: CCTGCTTGCATATGTATTGCATGAATGTAGTTCTAC...GAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACGGACTTCTCGGATaGAGTGATGAGATACACAGC +
Preference number: 4 (lower is better)
Translates to: VLSVKYSKNTDISMILNKDGLLG*SDEIHS
Trigger: GCTGTGTATCTCATCACTCCATCCGAGAAGTCCGTC...CTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGACGGACTTCTCGGATaGAGTGATGAGATACACAGC +
Preference number: 4 (lower is better)
Translates to: KNTDISMILNKDRNNPKQDGLLG*SDEIHS
Trigger: GCTGTGTATCTCATCACTCCATCCGAGAAGTCCGTC...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAATCACTGATGAGAGAGTaGACGGACTTCTCGGATGGA +
Preference number: 4 (lower is better)
Translates to: KNTDISMILNKDRNNPKQSLMRE*TDFSDG
Trigger: TCCATCCGAGAAGTCCGTCCACTCTCTCATCAGTGA...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCATTAAACAGGGCATCTaGACAAGAGTCAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFIKQGI*TRVSEE
Trigger: TTCTTCACTGACTCTTGTCCAGATGCCCTGTTTAAT...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGCCCTCCCCCATTGTTaGATCATCAGCTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: KNTDISMILNKDRNNPKQALPHC*IISFIG
Trigger: GCCTATAAAGCTGATGATCCAACAATGGGGGAGGGC...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGGCCCTCCCCCATTGTTaGATCATCAGCTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: SVKYSKNTDISMILNKDRALPHC*IISFIG
Trigger: GCCTATAAAGCTGATGATCCAACAATGGGGGAGGGC...CCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACCGGGAAGGGGTGCTGATTTCTTTATTTATTAGACTCAAGTGCTTTAGTACACCTCCCCGATGCCGCTaGTCTCATACTTGTATACAT +
Preference number: 4 (lower is better)
Translates to: HREGVLISLFIRLKCFSTPPRCR*SHTCIH
Trigger: ATGTATACAAGTATGAGACCAGCGGCATCGGGGAGG...TGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTCCTCCCCGATGCCGCTaGTCTCATACTTGTATACAT +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPPPRCR*SHTCIH
Trigger: ATGTATACAAGTATGAGACCAGCGGCATCGGGGAGG...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTATTTTCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGTCTGCGATGTGCTTGTaGCGCAGTGCTATCCACAGG +
Preference number: 4 (lower is better)
Translates to: LFSFVSNKKRASLNTRMQSAMCL*RSAIHR
Trigger: CCTGTGGATAGCACTGCGCCACAAGCACATCGCAGA...CTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAACAGGTCCCGCATGGTaGTCTTCTCTCCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: KNTDISMILNKDRNNPKQTGPAW*SSLQYS
Trigger: TGAATACTGGAGAGAAGACCACCATGCGGGACCTGT...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAAGGGACAGGTCCCGCATaGTGGTCTTCTCTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: ISPQCEILQEHRHLYDSQGTGPA*WSSLQY
Trigger: ATACTGGAGAGAAGACCACCATGCGGGACCTGTCCC...TTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ATAAAGAAAAAGAGTGACGGAATAATCAAAGAAAGCCCTTCAGAGTGGAAGAGTACTGCGGTACTCGCCTaGGGCCTTGTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: IKKKSDGIIKESPSEWKSTAVLA*GLVLMP
Trigger: TGGCATAAGAACAAGGCCCCAGGCGAGTACCGCAGT...ACTCTTCCACTCTGAAGGGCTTTCTTTGATTATTCCGTCACTCTTTTTCTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494254.3
CDS-3UTR CCA 90 bp TCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SQILNNGEKASIHPNSPEVFPKR*RLPAGV
Trigger: AACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAAC...TTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GAAGATAGCAGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTCAAGTAATACACACATaGCCTGCAGGAGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: EDSRLVLSVKYSKNTDISQVIHT*PAGGQG
Trigger: CCCTTGACCTCCTGCAGGCCATGTGTGTATTACTTG...AGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCTGCTATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp AGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGCAAGTAATACACACATaGCCTGCAGGAGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SVKYSKNTDISMILNKDRQVIHT*PAGGQG
Trigger: CCCTTGACCTCCTGCAGGCCATGTGTGTATTACTTG...CCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCATCCTCATGCTTAACTaGTCCACCACCAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: RLVLSVKYSKNTDISMILILMLN*STTSTF
Trigger: GAAGGTGCTGGTGGTGGATCAGTTAAGCATGAGGAT...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCTGACTTTATGCCCTCGGTCATaGTGTCTGTCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: TPHNTRYYEVSETEDNLTLCPRS*CLSSCS
Trigger: GCTGCAAGATGACAGACATCATGACCGAGGGCATAA...AGTCAGATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATATTATGCCCTCGGTCATaGTGTCTGTCATCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: DSLPAFAALVSALELSFILCPRS*CLSSCS
Trigger: GCTGCAAGATGACAGACATCATGACCGAGGGCATAA...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTATAAGATACTCTTTTTGTCCTGGATTAGCTaGGCCAGCAGGGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: APIAHELLFLGYMYKILFLSWIS*ASRALS
Trigger: GGACAATGCCCTGCTGGCTCAGCTAATCCAGGACAA...AAAGAGTATCTTATACATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACAGAGATGTAGAGAAGGATaGTGCGGATTTTGTCATAAG +
Preference number: 4 (lower is better)
Translates to: FVSNKKRASLNTRMQRQQRCREG*CGFCHK
Trigger: CTTATGACAAAATCCGCATCATCCTTCTCTACATCT...CTGTTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTAAGATGTAGAGAAGGATaGTGCGGATTTTGTCATAAG +
Preference number: 4 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVRCREG*CGFCHK
Trigger: CTTATGACAAAATCCGCATCATCCTTCTCTACATCT...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CACCGGGAAGGGGTGCTGATTTCTTTATTTATTAGACTCAAGTGCTTTAGTACAGTGGGAGTAAGAATGTaGGTAGAACCTATCAGCACC +
Preference number: 4 (lower is better)
Translates to: HREGVLISLFIRLKCFSTVGVRM*VEPIST
Trigger: GGTGCTGATAGGTTCTACTCACATTCTTACTCCCAC...TGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650920.1
CDS-3UTR TCA 90 bp GCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTATAAGATACTCTTTAATGAGCTGTTGGGATaGTGCCTGGGGACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: APIAHELLFLGYMYKILFNELLG*CLGTEG
Trigger: CCCTTCTGTCCCCAGGCATCATCCCAACAGCTCATT...AAAGAGTATCTTATACATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AATTTCTCCTGCTGTGCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 4 (lower is better)
Translates to: NFSCCAPIAHELLFLGYMSRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...CATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCACAGCAGGAGAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGTCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 4 (lower is better)
Translates to: SVKYSKNTDISMILNKDRSRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...CCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATAAGACGGGGAGAGATCTaGCGACTAATCTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: DSLPAFAALVSALELSFIRRGEI*RLISVQ
Trigger: TTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCT...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAGACGGGGAGAGATCTaGCGACTAATCTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: RLVLSVKYSKNTDISMILRRGEI*RLISVQ
Trigger: TTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCT...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTATAAGATACTCTTTCAAGGTCCTGAAGCATaGGCACTGTTTGGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: APIAHELLFLGYMYKILFQGPEA*ALFGPR
Trigger: CCTCGGACCAAACAGTGCTCATGCTTCAGGACCTTG...AAAGAGTATCTTATACATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACCGGGAAGGGGTGCTaGTTTCTTTATTTATTAGAC +
Preference number: 4 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQTGKGC*FLYLLD
Trigger: GTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGT...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp CATGTTGACATATGCAACTGTGTGTCATGCATTTTTAACTGCTTTAAACTCACCACTCCCTGCTTCTACTaGGCAAAAGCAGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: HVDICNCVSCIFNCFKLTTPCFY*AKAAAL
Trigger: CAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGT...GGTGAGTTTAAAGCAGTTAAAAATGCATGACACACAGTTGCATATGTCAACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636962.2
CDS-3UTR TCA 90 bp GCCAGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACAATGTGGTGCTTTTTATaGGGTTTTGAAGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: ASHYPDFGICHSHACFHTMWCFL*GFEVPW
Trigger: CCACGGCACTTCAAAACCTCATAAAAAGCACCACAT...TGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp AAAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGATTTACAGTCCAGTCTaGGAAAGAAGGAATTACACC +
Preference number: 4 (lower is better)
Translates to: KNTQISTVPYPSNVHVTQIYSPV*ERRNYT
Trigger: GGTGTAATTCCTTCTTTCTCAGACTGGACTGTAAAT...CTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637173.2
ENST00000650920.1
CDS-3UTR GCA 90 bp AGGCTTCAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTTTCTTTATCACATCATaGATAATCTTCTCTCCGACA +
Preference number: 4 (lower is better)
Translates to: RLQMYLITRKLRLGSGCPFFITS*IIFSPT
Trigger: TGTCGGAGAGAAGATTATGCATGATGTGATAAAGAA...AGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTGAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp CGCATTCCTTCTGGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTTCTTTATCACATCATaGATAATCTTCTCTCCGACA +
Preference number: 4 (lower is better)
Translates to: RIPSGRQMQFVSLPTFCIFFITS*IIFSPT
Trigger: TGTCGGAGAGAAGATTATGCATGATGTGATAAAGAA...AATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAGGAATGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp GTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGAGTGAAGAAGACGTGTaGAGCCCGGTATTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: VLSVKYSKNTDISMILNKSEEDV*SPVFSS
Trigger: ACTGCTAAATACCGGGCTGCACACGTCTTCTTCACT...CTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTTCATACGGGAGAAATaGAATATTGATTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLFIREK*NIDFRQ
Trigger: CTGACGGAAATCAATATTGCATTTCTCCCGTATGAA...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR GCA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGATTCATACGGGAGAAATaGAATATTGATTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGFIREK*NIDFRQ
Trigger: CTGACGGAAATCAATATTGCATTTCTCCCGTATGAA...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR GCA 90 bp GCAATATGTGGTGCTTTTTATGAGGTTTTGAAGTGCCGTGGTTTGCCACGGTTAAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: AICGAFYEVLKCRGLPRLRVCLR*LGNASY
Trigger: GTATGAAGCATTACCAAGGCACCGTAGACAAACTCT...TAACCGTGGCAAACCACGGCACTTCAAAACCTCATAAAAAGCACCACATATTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQRVCLR*LGNASY
Trigger: GTATGAAGCATTACCAAGGCACCGTAGACAAACTCT...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGCGAGACAGCCTTCCTaGATTTGCTGCTTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: VLSVKYSKNTDISMILNKARQPS*ICCFSF
Trigger: GAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGC...CTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTCTTCTGGGCGGCAGATaGAGTTTGTCAGTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RCSLSVCQHSAFMRTVCCLLGGR*SLSVCQ
Trigger: TTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAG...ACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp CGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACACACTCTGGTTTGAATTaGATTTCCCTGACCACTAAT +
Preference number: 4 (lower is better)
Translates to: RPFILTVQKFLLLCTNCTHSGLN*ISLTTN
Trigger: ATTAGTGGTCAGGGAAATGCAATTCAAACCAGAGTG...TGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR CCA 90 bp GCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTATAAGATACTCTTTGGTACTCCTTCAGGGTaGCACAAAGGGTCGCGATCT +
Preference number: 4 (lower is better)
Translates to: APIAHELLFLGYMYKILFGTPSG*HKGSRS
Trigger: AGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACC...AAAGAGTATCTTATACATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCTGACTCCTCCCCGATGCCGCTaGTCTCATACTTGTATACAT +
Preference number: 4 (lower is better)
Translates to: TPHNTRYYEVSETEDNLTPPRCR*SHTCIH
Trigger: ATGTATACAAGTATGAGACCAGCGGCATCGGGGAGG...AGTCAGATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp GCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTATAAGATACTCTTTGGGACAGGTCCCGCATaGTGGTCTTCTCTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: APIAHELLFLGYMYKILFGTGPA*WSSLQY
Trigger: ATACTGGAGAGAAGACCACCATGCGGGACCTGTCCC...AAAGAGTATCTTATACATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGGGTATCTGGGCGTGCTaGATCAGTTTGTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: QMQFVSLPTFCIYENSLLGIWAC*ISLFRF
Trigger: AAACCTGAACAAACTGATCCAGCACGCCCAGATACC...CAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp GCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTATAAGATACTCTTTACTGCGGTACTCGCCTaGGGCCTTGTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: APIAHELLFLGYMYKILFTAVLA*GLVLMP
Trigger: TGGCATAAGAACAAGGCCCCAGGCGAGTACCGCAGT...AAAGAGTATCTTATACATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTATTTTCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGGTCCAGCAGTTTCTGTaGGGTGAGGATGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LFSFVSNKKRASLNTRMQVQQFL*GEDVCG
Trigger: TCCACACACATCCTCACCCCACAGAAACTGCTGGAC...CTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTT +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPVFPKR*RLPAGV
Trigger: AACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAAC...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAATCAGGTCGTATAAGTTaGGAGGGAGACGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ISPQCEILQEHRHLYDSQSGRIS*EGDGER
Trigger: TCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGA...TTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CATTGGGTGAATACACAGTTTATCTGTTCTCTTCTTGATGAGCATTGGGCTTTTTTTTCTCCCCAGGCTTaGCTTGGACTCATCGTCAAC +
Preference number: 4 (lower is better)
Translates to: HWVNTQFICSLLDEHWAFFSPQA*LGLIVN
Trigger: GTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAA...AAAAGCCCAATGCTCATCAAGAAGAGAACAGATAAACTGTGTATTCACCCAATG
43% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp CATTGGGTGAATACACAGTTTATCTGTTCTCTTCTTGATGAGCATTGGGCTTTTGGTTTTGAAGTGCCGTaGTTTGCCACGGTTACTACG +
Preference number: 4 (lower is better)
Translates to: HWVNTQFICSLLDEHWAFGFEVP*FATVTT
Trigger: CGTAGTAACCGTGGCAAACCACGGCACTTCAAAACC...AAAAGCCCAATGCTCATCAAGAAGAGAACAGATAAACTGTGTATTCACCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp GCCAGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACAGCTCTCTGCGCTTATTaGTATCTTCCACAATCGTTA +
Preference number: 4 (lower is better)
Translates to: ASHYPDFGICHSHACFHTALCAY*YLPQSL
Trigger: TAACGATTGTGGAAGATATCAATAAGCGCAGAGAGC...TGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATAAGCTCTTTCTGGTACTaGGGCATCTTCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: DSLPAFAALVSALELSFISSFWY*GIFFSI
Trigger: GATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCT...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGAGTTTTTGTCATAAGTGCTaGCATTGGCATCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CIYENSLLFTHVASRILSFCHKC*HWHPAE
Trigger: TTCTGCTGGATGCCAATGTCAGCACTTATGACAAAA...ACTCAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp TTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGTCAGGTTTTCCTCCGTaGTGCCATTCTTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: FCIYENSLLFTHVASRILSGFPP*CHSSKR
Trigger: TCTTTTTGAAGAATGGCATCACGGAGGAAAACCTGA...CAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMCTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTATTTTCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCCTCCTGAGATATCCTaGTTGTCACCTCCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: LFSFVSNKKRASLNTRMQPPEIS*LSPPRL
Trigger: TAACCTGGGAGGTGACAATCAGGATATCTCAGGAGG...CTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTATAAGATACTCTTTCCACCTTGGACCTCCTaGGATATCCTGATTGTCACC +
Preference number: 4 (lower is better)
Translates to: APIAHELLFLGYMYKILFPPWTS*DILIVT
Trigger: GGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGG...AAAGAGTATCTTATACATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATATCGCGTACAGCACTTTaGGAGGACATCACTAGACAA +
Preference number: 4 (lower is better)
Translates to: DSLPAFAALVSALELSFISRTAL*EDITRQ
Trigger: TTGTCTAGTGATGTCCTCTCAAAGTGCTGTACGCGA...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACAGAGAATGGTACAGAGATaGTATATGTTTGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: FVSNKKRASLNTRMQRQQRMVQR*YMFVLQ
Trigger: CTGAAGCACAAACATATATCATCTCTGTACCATTCT...CTGTTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTAATCATCATCAATGGCTaGGCCCTCACTGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: CSLSVCQHSAFMRTVCCLIIING*ALTVLP
Trigger: AGGAAGCACAGTGAGGGCTCAGCCATTGATGATGAT...TAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp AGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTACTACGGGACTGAATaGAGGAGGATGAACGCAGAA +
Preference number: 4 (lower is better)
Translates to: RCSLSVCQHSAFMRTVCCYYGTE*RRMNAE
Trigger: TTCTGCGTTCATCCTCCTTCATTCAGTCCCGTAGTA...ACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTAAACTCACCATTGGGTaGATACACAGTTTATCTGTT +
Preference number: 4 (lower is better)
Translates to: GRQMQFVSLPTFCIYENSKLTIG*IHSLSV
Trigger: AACAGATAAACTGTGTATTCACCCAATGGTGAGTTT...ACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
CDS-3UTR TCA 90 bp ACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCTGACTTTAAAACAACACAGCTaGGCTCTGCGGTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: TPHNTRYYEVSETEDNLTLKQHS*ALRSEL
Trigger: GAGTTCAGACCGCAGAGCTCAGCTGTGTTGTTTTAA...AGTCAGATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR TCA 90 bp GTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGCTCTCTGCGCTTATTaGTATCTTCCACAACATGTG +
Preference number: 4 (lower is better)
Translates to: VLSVKYSKNTDISMILNKALCAY*YLPQHV
Trigger: CACATGTTGTGGAAGATATCAATAAGCGCAGAGAGC...CTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR TCA 90 bp AATTTCTCCTGCTGTGCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGGCTCTCTGCGCTTATTaGTATCTTCCACAACATGTG +
Preference number: 4 (lower is better)
Translates to: NFSCCAPIAHELLFLGYMALCAY*YLPQHV
Trigger: CACATGTTGTGGAAGATATCAATAAGCGCAGAGAGC...CATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCACAGCAGGAGAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR GCA 90 bp TCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: SQILNNGEKASIHPNSPERVCLR*LGNASY
Trigger: GTATGAAGCATTACCAAGGCACCGTAGACAAACTCT...TTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTATAAGATACTCTTTCTGACTGAAGATGCTTaGCGAGAGGGTACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: APIAHELLFLGYMYKILFLTEDA*REGTGS
Trigger: AGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAG...AAAGAGTATCTTATACATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATATCTGCGATGAACCACTaGAAAAGCTTTCTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: DSLPAFAALVSALELSFISAMNH*KSFLLP
Trigger: CGGAAGGAGAAAGCTTTTGCAGTGGTTCATCGCAGA...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637173.2
CDS-3UTR CCA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAATTAAACAGGGCATCTaGACAAGAGTCAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRIKQGI*TRVSEE
Trigger: TTCTTCACTGACTCTTGTCCAGATGCCCTGTTTAAT...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CCA 90 bp TGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTAGCCCTCCCCCATTGTTaGATCATCAGCTTTATAGGC +
Preference number: 4 (lower is better)
Translates to: CSLSVCQHSAFMRTVCCLALPHC*IISFIG
Trigger: GCCTATAAAGCTGATGATCCAACAATGGGGGAGGGC...TAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATAGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTT +
Preference number: 4 (lower is better)
Translates to: DSLPAFAALVSALELSFIVFPKR*RLPAGV
Trigger: AACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAAC...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCTGACTGTTTTTCCAAAGAGATaGAGGCTTCCAGCGGGAGTT +
Preference number: 4 (lower is better)
Translates to: TPHNTRYYEVSETEDNLTVFPKR*RLPAGV
Trigger: AACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAAC...AGTCAGATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp TGTATGACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCAAGTAATACACACATaGCCTGCAGGAGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: CMTPHNTRYYEVSETEDNQVIHT*PAGGQG
Trigger: CCCTTGACCTCCTGCAGGCCATGTGTGTATTACTTG...ATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
3UTR CAA 72 bp TACGGGAGAAATGCAATATTGATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGGGATTTTACCAGTTCA +
Preference number: 4 (lower is better)
Translates to: YGRNAILISVRV*MTLAARDFTSS
Trigger: TGAACTGGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAATCAATATTGCATTTCTCCCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR TCA 90 bp TGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTAAGCTCTTTCTGGTACTaGGGCATCTTCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: CSLSVCQHSAFMRTVCCLSSFWY*GIFFSI
Trigger: GATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCT...TAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp TTATTTTCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGAGCTCTTTCTGGTACTaGGGCATCTTCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: LFSFVSNKKRASLNTRMQSSFWY*GIFFSI
Trigger: GATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCT...CTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACTTTTGTCATAAGTGCTaGCATTGGCATCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNFCHKC*HWHPAE
Trigger: TTCTGCTGGATGCCAATGTCAGCACTTATGACAAAA...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GAAGATAGCAGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTTTTTGTCATAAGTGCTaGCATTGGCATCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: EDSRLVLSVKYSKNTDISFCHKC*HWHPAE
Trigger: TTCTGCTGGATGCCAATGTCAGCACTTATGACAAAA...AGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCTGCTATCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGAGATGTAGAGAAGGATaGTGCGGATTTTGTCATAAG +
Preference number: 4 (lower is better)
Translates to: FCIYENSLLFTHVASRILRCREG*CGFCHK
Trigger: CTTATGACAAAATCCGCATCATCCTTCTCTACATCT...CAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp ACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTTTCAGGTTTTCCTCCGTaGTGCCATTCTTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: TDISMILNKDRNNPKQGFSGFPP*CHSSKR
Trigger: TCTTTTTGAAGAATGGCATCACGGAGGAAAACCTGA...AAAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTTCAGGTTTTCCTCCGTaGTGCCATTCTTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPSGFPP*CHSSKR
Trigger: TCTTTTTGAAGAATGGCATCACGGAGGAAAACCTGA...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TCACGACCCTCACTCTTTCAGCCTGCAACATTGAAGCTTTATATAAATGCACTAAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: SRPSLFQPATLKLYINALRVCLR*LGNASY
Trigger: GTATGAAGCATTACCAAGGCACCGTAGACAAACTCT...TAGTGCATTTATATAAAGCTTCAATGTTGCAGGCTGAAAGAGTGAGGGTCGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
CDS-3UTR GCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNRVCLR*LGNASY
Trigger: GTATGAAGCATTACCAAGGCACCGTAGACAAACTCT...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGTCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 4 (lower is better)
Translates to: SVKYSKNTDISMILNKDRSRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...CCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CACCGGGAAGGGGTGCTGATTTCTTTATTTATTAGACTCAAGTGCTTTAGTACATCCAGAAATTTCTCCTaGTGTGCACCAATTGCACAT +
Preference number: 4 (lower is better)
Translates to: HREGVLISLFIRLKCFSTSRNFS*CAPIAH
Trigger: ATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGA...TGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTCCTTCCTGCATTTGCTaGTTTAGTTTCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFPSCIC*FSFCFR
Trigger: TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGG...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTAGTTTGCCAACATTCTaGATTTATGAGAACAGTTTG +
Preference number: 4 (lower is better)
Translates to: GRQMQFVSLPTFCIYENSSLPTF*IYENSL
Trigger: CAAACTGTTCTCATAAATGCAGAATGTTGGCAAACT...ACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp ACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTTCTGGCTCACAGGACATaGATACCTTCAACTTTACTA +
Preference number: 4 (lower is better)
Translates to: TDISMILNKDRNNPKQGFLAHRT*IPSTLL
Trigger: TAGTAAAGTTGAAGGTATGCATGTCCTGTGAGCCAG...AAAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR CCA 90 bp GCCAGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACAATTAAACAGGGCATCTaGACAAGAGTCAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: ASHYPDFGICHSHACFHTIKQGI*TRVSEE
Trigger: TTCTTCACTGACTCTTGTCCAGATGCCCTGTTTAAT...TGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp CAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGAGATGTAGAGAAGGATaGTGCGGATTTTGTCATAAG +
Preference number: 4 (lower is better)
Translates to: QMQFVSLPTFCIYENSLLRCREG*CGFCHK
Trigger: CTTATGACAAAATCCGCATCATCCTTCTCTACATCT...CAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp ACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTTAGATGTAGAGAAGGATaGTGCGGATTTTGTCATAAG +
Preference number: 4 (lower is better)
Translates to: TDISMILNKDRNNPKQGFRCREG*CGFCHK
Trigger: CTTATGACAAAATCCGCATCATCCTTCTCTACATCT...AAAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAGATGTAGAGAAGGATaGTGCGGATTTTGTCATAAG +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNRCREG*CGFCHK
Trigger: CTTATGACAAAATCCGCATCATCCTTCTCTACATCT...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAGATGTAGAGAAGGATaGTGCGGATTTTGTCATAAG +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPRCREG*CGFCHK
Trigger: CTTATGACAAAATCCGCATCATCCTTCTCTACATCT...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp AGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTCAGGTTTTCCTCCGTaGTGCCATTCTTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: RCSLSVCQHSAFMRTVCCSGFPP*CHSSKR
Trigger: TCTTTTTGAAGAATGGCATCACGGAGGAAAACCTGA...ACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp ATAAAGAAAAAGAGTGACGGAATAATCAAAGAAAGCCCTTCAGAGTGGAAGAGTTCCATTGTTGGAGCCTaGTCCTCAAAAGATACCCTA +
Preference number: 4 (lower is better)
Translates to: IKKKSDGIIKESPSEWKSSIVGA*SSKDTL
Trigger: TAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGA...ACTCTTCCACTCTGAAGGGCTTTCTTTGATTATTCCGTCACTCTTTTTCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494254.3
CDS-3UTR TCA 90 bp GAAGATAGCAGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTTGCACCAATTGCACATaGGCTTCTCTTTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: EDSRLVLSVKYSKNTDISCTNCT*ASLFRI
Trigger: TATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCA...AGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCTGCTATCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAAAAACACGATGATGTATaGCCCCACACAACACAAGGT +
Preference number: 4 (lower is better)
Translates to: ISPQCEILQEHRHLYDSQKHDDV*PHTTQG
Trigger: ACCTTGTGTTGTGTGGGGTCATACATCATCGTGTTT...TTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTCCTTCCTGCATTTGCTaGTTTAGTTTCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPPSCIC*FSFCFR
Trigger: TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGG...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp CGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGTGTCCTCCCATAATGTaGTCTTTTCACTCATTGTTA +
Preference number: 4 (lower is better)
Translates to: RQMQFVSLPTFCIYENSLCPPIM*SFHSLL
Trigger: TAACAATGAGTGAAAAGAGCACATTATGGGAGGACA...CAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636962.2
CDS-3UTR GCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACTTTACTAGACACTaGCAAGTGGTTTTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPNFTRH*QVVFKG
Trigger: CCCTTTGAAAACCACTTGGCAGTGTCTAGTAAAGTT...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR CCA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTATTAAACAGGGCATCTaGACAAGAGTCAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LCTRSQILNNGEKASIHPIKQGI*TRVSEE
Trigger: TTCTTCACTGACTCTTGTCCAGATGCCCTGTTTAAT...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp CACCGGGAAGGGGTGCTGATTTCTTTATTTATTAGACTCAAGTGCTTTAGTACAATTAAACAGGGCATCTaGACAAGAGTCAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: HREGVLISLFIRLKCFSTIKQGI*TRVSEE
Trigger: TTCTTCACTGACTCTTGTCCAGATGCCCTGTTTAAT...TGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CCA 90 bp ATAAAGAAAAAGAGTGACGGAATAATCAAAGAAAGCCCTTCAGAGTGGAAGAGTCTCTCACTCCATTGTTaGAGCCTGATCCTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: IKKKSDGIIKESPSEWKSLSLHC*SLILKR
Trigger: TCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG...ACTCTTCCACTCTGAAGGGCTTTCTTTGATTATTCCGTCACTCTTTTTCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494254.3
CDS-3UTR CCA 90 bp TGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTAGCCCTTTGTATTTACTaGGTAGAAAGAGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CSLSVCQHSAFMRTVCCLALCIY*VERAGK
Trigger: CTTCCCTGCTCTTTCTACCCAGTAAATACAAAGGGC...TAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR TCA 90 bp TGTATGACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATTTTTGTCATAAGTGCTaGCATTGGCATCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CMTPHNTRYYEVSETEDNFCHKC*HWHPAE
Trigger: TTCTGCTGGATGCCAATGTCAGCACTTATGACAAAA...ATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp GCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTATAAGATACTCTTTAAACTGAGGATAATCTaGCTGAAGATGCTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: APIAHELLFLGYMYKILFKLRII*LKMLAE
Trigger: CTCGGCAAGCATCTTCAGTCAGATTATCCTCAGTTT...AAAGAGTATCTTATACATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR TCA 90 bp ACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTTAGAATGGTACAGAGATaGTATATGTTTGTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: TDISMILNKDRNNPKQGFRMVQR*YMFVLQ
Trigger: CTGAAGCACAAACATATATCATCTCTGTACCATTCT...AAAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp ACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCTGACTCCTTCCTGCATTTGCTaGTTTAGTTTCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: TPHNTRYYEVSETEDNLTPSCIC*FSFCFR
Trigger: TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGG...AGTCAGATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCCCTTCCTGCATTTGCTaGTTTAGTTTCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: RLVLSVKYSKNTDISMILPSCIC*FSFCFR
Trigger: TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGG...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATACCTTCCTGCATTTGCTaGTTTAGTTTCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: DSLPAFAALVSALELSFIPSCIC*FSFCFR
Trigger: TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGG...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTGGTCAGCTGCTTAATTGATCACAGGTTCACATTATTGCTAACAGGCTTCAGATGCAGTTTGTCAGTTTaGCAACATTCTGCATTTATG +
Preference number: 4 (lower is better)
Translates to: LVSCLIDHRFTLLLTGFRCSLSV*QHSAFM
Trigger: CATAAATGCAGAATGTTGGCAAACTGACAAACTGCA...TCTGAAGCCTGTTAGCAATAATGTGAACCTGTGATCAATTAAGCAGCTGACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
3UTR CAA 72 bp AATGCAATATTGATTTCCGTCAGAGTTTTGATGACTTaGGCTGCTCGGGATTTTACCAGTTCATTAAACAGG +
Preference number: 4 (lower is better)
Translates to: NAILISVRVLMT*AARDFTSSLNR
Trigger: CCTGTTTAATGAACTGGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAATCAATATTGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR TCA 90 bp AGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACATTTATTCCCCCTTCTTCTTaGCCTTCTTTATCACATCAT +
Preference number: 4 (lower is better)
Translates to: SHYPDFGICHSHACFHTFIPPSS*PSLSHH
Trigger: ATGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAAT...AAATGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACTTCTTTATCACATCATaGATAATCTTCTCTCCGACA +
Preference number: 4 (lower is better)
Translates to: VKYSKNTDISMILNKDRNFFITS*IIFSPT
Trigger: TGTCGGAGAGAAGATTATGCATGATGTGATAAAGAA...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637464.2
ENST00000637953.1
CDS-3UTR GCA 90 bp TGTATGACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCCTTCCTGCATTTGCTaGTTTAGTTTCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: CMTPHNTRYYEVSETEDNPSCIC*FSFCFR
Trigger: TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGG...ATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp TTGGTCAGCTGCTTAATTGATCACAGGTTCACATTATTGCTAACAGGCTTCAGAAGTTTGCCAACATTCTaGATTTATGAGAACAGTTTG +
Preference number: 4 (lower is better)
Translates to: LVSCLIDHRFTLLLTGFRSLPTF*IYENSL
Trigger: CAAACTGTTCTCATAAATGCAGAATGTTGGCAAACT...TCTGAAGCCTGTTAGCAATAATGTGAACCTGTGATCAATTAAGCAGCTGACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR GCA 90 bp TCACGACCCTCACTCTTTCAGCCTGCAACATTGAAGCTTTATATAAATGCACTATCATGCATTTTTAACTaGTTTAAACTCACCATTGGG +
Preference number: 4 (lower is better)
Translates to: SRPSLFQPATLKLYINALSCIFN*FKLTIG
Trigger: CCCAATGGTGAGTTTAAAGCAGTTAAAAATGCATGA...TAGTGCATTTATATAAAGCTTCAATGTTGCAGGCTGAAAGAGTGAGGGTCGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636962.2
CDS-3UTR GCA 90 bp CATTGGGTGAATACACAGTTTATCTGTTCTCTTCTTGATGAGCATTGGGCTTTTGAAGCTTTATATAAATaGACTATCCTGTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: HWVNTQFICSLLDEHWAFEALYK*TILSVS
Trigger: GGACACAGACAGGATAGTGCATTTATATAAAGCTTC...AAAAGCCCAATGCTCATCAAGAAGAGAACAGATAAACTGTGTATTCACCCAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636962.2
CDS-3UTR TCA 90 bp GCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTATAAGATACTCTTTATTCCCCCTTCTTCTTaGCCTTCTTTATCACATCAT +
Preference number: 4 (lower is better)
Translates to: APIAHELLFLGYMYKILFIPPSS*PSLSHH
Trigger: ATGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAAT...AAAGAGTATCTTATACATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCTTCTTTATCACATCATaGATAATCTTCTCTCCGACA +
Preference number: 4 (lower is better)
Translates to: RLVLSVKYSKNTDISMILFFITS*IIFSPT
Trigger: TGTCGGAGAGAAGATTATGCATGATGTGATAAAGAA...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637464.2
ENST00000637953.1
CDS-3UTR GCA 90 bp TGTATGACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATTTCATACGGGAGAAATaGAATATTGATTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: CMTPHNTRYYEVSETEDNFIREK*NIDFRQ
Trigger: CTGACGGAAATCAATATTGCATTTCTCCCGTATGAA...ATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR GCA 90 bp AGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACATTTCTCACTCTTTCAGCCTaGAACATTGAAGCTTTATAT +
Preference number: 4 (lower is better)
Translates to: SHYPDFGICHSHACFHTFLTLSA*NIEALY
Trigger: ATATAAAGCTTCAATGTTGCAGGCTGAAAGAGTGAG...AAATGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636962.2
3UTR CAA 72 bp GTAGGAGTTTCCATTTTTCTACCTCCTCACCGTCACTaGGCATTATCAGAGATTAAATATTCTAATATTTTG +
Preference number: 4 (lower is better)
Translates to: VGVSIFLPPHRH*ALSEIKYSNIL
Trigger: CAAAATATTAGAATATTTAATCTCTGATAATGCCAAGTGACGGTGAGGAGGTAGAAAAATGGAAACTCCTAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS CCA 90 bp TCCCGCGACGCCTGCGGACCCCGCCGCCTCCTCAGGTGGGCGCGCTaGGCCAGCCGCAGCTCTCCGCCCCGCAGCCGCGCTAGGGACCGA +
Preference number: 5 (lower is better)
Translates to: SRDACGPRRLLRWAR*ASRSSPPRSRARDR
Trigger: TCGGTCCCTAGCGCGGCTGCGGGGCGGAGAGCTGCGGCTGGCCCAGCGCGCCCACCTGAGGAGGCGGCGGGGTCCGCAGGCGTCGCGGGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000627871.2
ENST00000630492.2
ENST00000635950.2
ENST00000636962.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
CDS GCA 90 bp CGCTGCGCGAGTCTCCCGGCTCCGATCTCCTCGTCCCGCGACGCCTaGGGACCCCGCCGCCTCCTCAGGTGGGCGCGCTGGGCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: RCASLPAPISSSRDA*GPRRLLRWARWASR
Trigger: GCGGCTGGCCCAGCGCGCCCACCTGAGGAGGCGGCGGGGTCCGCAGGCGTCGCGGGACGAGGAGATCGGAGCCGGGAGACTCGCGCAGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000627871.2
ENST00000630492.2
ENST00000635950.2
ENST00000636962.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
CDS GCA 90 bp GCGCGCCCGGGGCGCAGGGTACCCAGGCCTCCTCTTTCCCGTCGGTaGTGGGATCCCTGGCCACAGGCTACCGACGCGCTCCATCTGCCT +
Preference number: 5 (lower is better)
Translates to: ARPGRRVPRPPLSRR*WDPWPQATDALHLP
Trigger: AGGCAGATGGAGCGCGTCGGTAGCCTGTGGCCAGGGATCCCAGCACCGACGGGAAAGAGGAGGCCTGGGTACCCTGCGCCCCGGGCGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS CCA 90 bp CGCCCGGGGCGCAGGGTACCCAGGCCTCCTCTTTCCCGTCGGTGCTaGGATCCCTGGCCACAGGCTACCGACGCGCTCCATCTGCCTGAA +
Preference number: 5 (lower is better)
Translates to: RPGRRVPRPPLSRRC*DPWPQATDALHLPE
Trigger: TTCAGGCAGATGGAGCGCGTCGGTAGCCTGTGGCCAGGGATCCCAGCACCGACGGGAAAGAGGAGGCCTGGGTACCCTGCGCCCCGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS CCA 90 bp CGCAGGGTACCCAGGCCTCCTCTTTCCCGTCGGTGCTGGGATCCCTaGCCACAGGCTACCGACGCGCTCCATCTGCCTGAAACCCCGCTC +
Preference number: 5 (lower is better)
Translates to: RRVPRPPLSRRCWDP*PQATDALHLPETPL
Trigger: GAGCGGGGTTTCAGGCAGATGGAGCGCGTCGGTAGCCTGTGGCCAGGGATCCCAGCACCGACGGGAAAGAGGAGGCCTGGGTACCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR CAA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGAGCTGGGAGCGTGCCTaGTCTGGGCCCTCCCCCATT +
Preference number: 5 (lower is better)
Translates to: AKELRRAVVGSCGALWDGSWERA*SGPSPI
Trigger: AATGGGGGAGGGCCCAGACAAGGCACGCTCCCAGCT...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTGGAGGGGCTTCCAGCGGGAGTTaGCTTCTCACCTGTCAGGGC +
Preference number: 5 (lower is better)
Translates to: GRWWEAAERCGMGACFGGASSGS*LLTCQG
Trigger: GCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGC...CCCTCCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS CCA 90 bp GGCAGGGCAGAGCCCCGCAACCAGGGAGATTGCAGACTGCGGCGCTaGGCGGCGGACACCGAAGCTCTCCTCATCTCCCGAGTGATTTCA +
Preference number: 5 (lower is better)
Translates to: GRAEPRNQGDCRLRR*AADTEALLISRVIS
Trigger: TGAAATCACTCGGGAGATGAGGAGAGCTTCGGTGTCCGCCGCCCAGCGCCGCAGTCTGCAATCTCCCTGGTTGCGGGGCTCTGCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS CCA 90 bp TCCACTGACCTCTGGGAGCCAGCCAGTTGGTACTGCCCTGGTGGGTaGGACCTCAGGTGTGAGAGGGAAAGGGCCAGGGGACCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: STDLWEPASWYCPGG*DLRCERERARGPEA
Trigger: GGCCTCAGGTCCCCTGGCCCTTTCCCTCTCACACCTGAGGTCCCACCCACCAGGGCAGTACCAACTGGCTGGCTCCCAGAGGTCAGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628768.1
CDS-3UTR CAA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTAAGCATGAGCACTGTTaGGTCCGAGGGAGGGGACAG +
Preference number: 5 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVKHEHC*VRGRGQ
Trigger: CTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCTT...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS GCA 90 bp TCACTTGGGGGACACACGGGAGGCCACTCCAGCAGACTGGTGCACTaGCTTACCCCCGATACCGCACAGCCGGGTACTCCTTCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: SLGGHTGGHSSRLVH*LTPDTAQPGTPSGW
Trigger: CCACCCTGAAGGAGTACCCGGCTGTGCGGTATCGGGGGTAAGGCAGTGCACCAGTCTGCTGGAGTGGCCTCCCGTGTGTCCCCCAAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS GCA 90 bp GTCGGTGCTGGGATCCCTGGCCACAGGCTACCGACGCGCTCCATCTaGCTGAAACCCCGCTCGGGTCCTGTCTTTCCTCTTTCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: VGAGIPGHRLPTRSI*LKPRSGPVFPLSGS
Trigger: GCTCCCAGAAAGAGGAAAGACAGGACCCGAGCGGGGTTTCAGGCAGATGGAGCGCGTCGGTAGCCTGTGGCCAGGGATCCCAGCACCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS GCA 90 bp CCCCTGGGAGAATCCACTGACCTCTGGGAGCCAGCCAGTTGGTACTaGCCTGGTGGGTGGGACCTCAGGTGTGAGAGGGAAAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PLGESTDLWEPASWY*PGGWDLRCERERAR
Trigger: CCTGGCCCTTTCCCTCTCACACCTGAGGTCCCACCCACCAGGGCAGTACCAACTGGCTGGCTCCCAGAGGTCAGTGGATTCTCCCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628768.1
CDS CCA 90 bp CCAGCTCCTCACTTGGGGGACACACGGGAGGCCACTCCAGCAGACTaGTGCACTGCCTTACCCCCGATACCGCACAGCCGGGTACTCCTT +
Preference number: 5 (lower is better)
Translates to: PAPHLGDTREATPAD*CTALPPIPHSRVLL
Trigger: AAGGAGTACCCGGCTGTGCGGTATCGGGGGTAAGGCAGTGCACCAGTCTGCTGGAGTGGCCTCCCGTGTGTCCCCCAAGTGAGGAGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR CAA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGGGCCCTCCCCCATTGTaGGATCATCAGCTTTATAGG +
Preference number: 5 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVGPPPL*DHQLYR
Trigger: CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCC...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS TCA 90 bp GTGCTGGGATCCCTGGCCACAGGCTACCGACGCGCTCCATCTGCCTaGAACCCCGCTCGGGTCCTGTCTTTCCTCTTTCTGGGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: VLGSLATGYRRAPSA*NPARVLSFLFLGAS
Trigger: GGAAGCTCCCAGAAAGAGGAAAGACAGGACCCGAGCGGGGTTTCAGGCAGATGGAGCGCGTCGGTAGCCTGTGGCCAGGGATCCCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR CAA 90 bp CAGACTGCGGCGCTGGGCGGCGGACACCGAAGCTCTCCTCATCTCCCGAGTGATTCTCCGACAACAGCTTaGAGGCCAATGGGGGCCATG +
Preference number: 5 (lower is better)
Translates to: QTAALGGGHRSSPHLPSDSPTTA*RPMGAM
Trigger: CATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAGA...ATCACTCGGGAGATGAGGAGAGCTTCGGTGTCCGCCGCCCAGCGCCGCAGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR CAA 90 bp GGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTTGGAGGGCTGGGCCCTCCCCCATaGTTGGATCATCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: GRWWEAAERCGMGACFGGLGPPP*LDHQLY
Trigger: ATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAG...CCCTCCAAAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTGCGTGCTGGATCAGTTaGTTCAGGTTTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFACWIS*FRFSSV
Trigger: CACGGAGGAAAACCTGAACAAACTGATCCAGCACGC...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AAGGAAAGCCAGACTGGAGCCCCCTGGACACCGGGAAGGGGTGCTGATTTCTTTTCCTTCCGCTCCGGCTaGCTCCGGCGACGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: KESQTGAPWTPGRGADFFSFRSG*LRRRSV
Trigger: CACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGA...AAAGAAATCAGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GGGAGCGTGCCTTGTCTGGGCCCTCCCCCATTGTTGGATCATCAGCTTTATAGGTCCTTCCGCTCCGGCTaGCTCCGGCGACGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: GSVPCLGPPPLLDHQLYRSFRSG*LRRRSV
Trigger: CACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGA...CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAGACAAGGCACGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR CAA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCTTCCGCTCCGGCTaGCTCCGGCGACGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: MLAERVQGLCESNGPRTFSFRSG*LRRRSV
Trigger: CACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGA...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTCCTCCATGATGTCCTaGATAATCGGAGTCCACCGT +
Preference number: 5 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVSSMMS*IIGVHR
Trigger: ACGGTGGACTCCGATTATCAAGGACATCATGGAGGA...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GCTGATGCGTTCCTTCCGCTCCGGCTTGCTCCGGCGACGCAGCGTGGAATCGGTTACTCGCCTGGGGCCTaGTTCTTATGCCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: ADAFLPLRLAPATQRGIGYSPGA*FLCQCP
Trigger: TGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTA...ACCGATTCCACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGAACGCATCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR CAA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTGGATGGGGGCGTGTTTaGGAGGGGCGACTTATTTTT +
Preference number: 5 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFGWGRV*EGRLIF
Trigger: AAAAATAAGTCGCCCCTCCAAAACACGCCCCCATCC...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTGAGGTCTGTTCCACCTaGGACCTCCTGAGATATCCT +
Preference number: 5 (lower is better)
Translates to: LRRAVVGSCGALWDGGVFEVCST*DLLRYP
Trigger: AGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC...AAACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTGAGGTCTGTTCCACCTaGGACCTCCTGAGATATCCT +
Preference number: 5 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVEVCST*DLLRYP
Trigger: AGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGGCTTCCAGCGGGAGTTaGCTTCTCACCTGTCAGGGC +
Preference number: 5 (lower is better)
Translates to: QALKGRRRWRRARVQHFEASSGS*LLTCQG
Trigger: GCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGC...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS CCA 90 bp CAAAGCCCCCTGGGAGAATCCACTGACCTCTGGGAGCCAGCCAGTTaGTACTGCCCTGGTGGGTGGGACCTCAGGTGTGAGAGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: QSPLGESTDLWEPAS*YCPGGWDLRCERER
Trigger: CCTTTCCCTCTCACACCTGAGGTCCCACCCACCAGGGCAGTACCAACTGGCTGGCTCCCAGAGGTCAGTGGATTCTCCCAGGGGGCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628768.1
CDS-3UTR CAA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCCCTCCCCCATTGTaGGATCATCAGCTTTATAGG +
Preference number: 5 (lower is better)
Translates to: AKELRRAVVGSCGALWDGGPPPL*DHQLYR
Trigger: CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCC...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTCTGGGCCCTCCCCCATaGTTGGATCATCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGLGPPP*LDHQLY
Trigger: ATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAG...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAAGCATGAGCACTGTTaGGTCCGAGGGAGGGGACAG +
Preference number: 5 (lower is better)
Translates to: QALKGRRRWRRARVQHFEKHEHC*VRGRGQ
Trigger: CTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCTT...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACTCTCCGACAACAGCTTaGAGGCCAATGGGGGCCATG +
Preference number: 5 (lower is better)
Translates to: KGGGGGAELAYSTLRGHHSPTTA*RPMGAM
Trigger: CATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAGA...GTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGGGCCCTCCCCCATTGTaGGATCATCAGCTTTATAGG +
Preference number: 5 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKGPPPL*DHQLYR
Trigger: CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCC...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CACAGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCAGCTGGGAGCGTGCCTaGTCTGGGCCCTCCCCCATT +
Preference number: 5 (lower is better)
Translates to: HSCTTGGMRRWERQRGLFSWERA*SGPSPI
Trigger: AATGGGGGAGGGCCCAGACAAGGCACGCTCCCAGCT...GAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTTGTCTACGGTGCCTaGGTAATGCTTCATACAGTC +
Preference number: 5 (lower is better)
Translates to: ELRRAVVGSCGALWDGGVFVYGA*VMLHTV
Trigger: GACTGTATGAAGCATTACCAAGGCACCGTAGACAAA...CACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGGCGTGCTGGATCAGTTaGTTCAGGTTTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKACWIS*FRFSSV
Trigger: CACGGAGGAAAACCTGAACAAACTGATCCAGCACGC...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGGCGTGCTGGATCAGTTaGTTCAGGTTTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: EATDAKELRRAVVGSCGAACWIS*FRFSSV
Trigger: CACGGAGGAAAACCTGAACAAACTGATCCAGCACGC...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTCCTTCCGCTCCGGCTaGCTCCGGCGACGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: RRWERQRGLFHLGPPEISSFRSG*LRRRSV
Trigger: CACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGA...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCACCTCCTTCCGCTCCGGCTaGCTCCGGCGACGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: SVSSSFCGVRMCVDPISTSFRSG*LRRRSV
Trigger: CACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGA...GGTGCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR CAA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTTCCTCCATGATGTCCTaGATAATCGGAGTCCACCGT +
Preference number: 5 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGSSMMS*IIGVHR
Trigger: ACGGTGGACTCCGATTATCAAGGACATCATGGAGGA...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGGGATGGGGGCGTGTTTaGGAGGGGCGACTTATTTTT +
Preference number: 5 (lower is better)
Translates to: EATDAKELRRAVVGSCGAGWGRV*EGRLIF
Trigger: AAAAATAAGTCGCCCCTCCAAAACACGCCCCCATCC...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGGATGGGGGCGTGTTTaGGAGGGGCGACTTATTTTT +
Preference number: 5 (lower is better)
Translates to: TDAKELRRAVVGSCGALWGWGRV*EGRLIF
Trigger: AAAAATAAGTCGCCCCTCCAAAACACGCCCCCATCC...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGGAGGTCTGTTCCACCTaGGACCTCCTGAGATATCCT +
Preference number: 5 (lower is better)
Translates to: EATDAKELRRAVVGSCGAEVCST*DLLRYP
Trigger: AGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC...CGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGATCAGGTCGTATAAGTaGGGAGGGAGACGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: QALKGRRRWRRARVQHFEIRSYK*GGRRGE
Trigger: CTCTCCCCGTCTCCCTCCCAACTTATACGACCTGAT...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTTCTTGAGACAACTGTCAGAGGAACCTTAAGGCCGGAGGAGGAGTCCAGGCCAAGGCCAGCTCCTCACTaGGGGGACACACGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: LLETTVRGTLRPEEESRPRPAPH*GDTREA
Trigger: GGCCTCCCGTGTGTCCCCCAAGTGAGGAGCTGGCCT...TGGCCTGGACTCCTCCTCCGGCCTTAAGGTTCCTCTGACAGTTGTCTCAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR CAA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGATGATGTCTGTCATCTaGCAGCAGGAGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: TDAKELRRAVVGSCGALWMMSVI*QQEDSI
Trigger: GATGCTGTCCTCCTGCTGCAAGATGACAGACATCAT...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGGGCGTGTTAGAGTTTTGATGACTTaGGCTGCTCGGGATTTTACC +
Preference number: 5 (lower is better)
Translates to: TEAGGGGKLRSAVGWGRVRVLMT*AARDFT
Trigger: GGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCT...AACACGCCCCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CCAGGCCAGCTCCTCACTTGGGGGACACACGGGAGGCCACTCCAGCAGACTGGTGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: PGQLLTWGTHGRPLQQTGGTVEA*ERVSRV
Trigger: GACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCC...ACCAGTCTGCTGGAGTGGCCTCCCGTGTGTCCCCCAAGTGAGGAGCTGGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR CAA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTCTGGGCCCTCCCCCATaGTTGGATCATCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPLGPPP*LDHQLY
Trigger: ATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAG...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGCTGGGGCTTCCAGCGGGAGTTaGCTTCTCACCTGTCAGGGC +
Preference number: 5 (lower is better)
Translates to: DLDWRTSLGITALWTQAGASSGS*LLTCQG
Trigger: GCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGC...CCCAGCCTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCAAGCATGAGCACTGTTaGGTCCGAGGGAGGGGACAG +
Preference number: 5 (lower is better)
Translates to: SLEKRTPQCSEQRGRGAGKHEHC*VRGRGQ
Trigger: CTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCTT...GCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS CCA 90 bp GGAAAGCATGGTGCCTGGGAGAGGAAGTTGATAGGCAAAGCCCCCTaGGAGAATCCACTGACCTCTGGGAGCCAGCCAGTTGGTACTGCC +
Preference number: 5 (lower is better)
Translates to: GKHGAWERKLIGKAP*ENPLTSGSQPVGTA
Trigger: GGCAGTACCAACTGGCTGGCTCCCAGAGGTCAGTGGATTCTCCCAGGGGGCTTTGCCTATCAACTTCCTCTCCCAGGCACCATGCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628768.1
CDS-3UTR CAA 90 bp CCAGGCCAGCTCCTCACTTGGGGGACACACGGGAGGCCACTCCAGCAGACTGGTATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: PGQLLTWGTHGRPLQQTGISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...ACCAGTCTGCTGGAGTGGCCTCCCGTGTGTCCCCCAAGTGAGGAGCTGGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR CAA 90 bp GCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGATGGGTTTGTCTACGGTGCCTaGGTAATGCTTCATACAGTC +
Preference number: 5 (lower is better)
Translates to: AKELRRAVVGSCGALWDGFVYGA*VMLHTV
Trigger: GACTGTATGAAGCATTACCAAGGCACCGTAGACAAA...CCCATCCCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CGCATTCCTTCTGGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTCCTTCCGCTCCGGCTaGCTCCGGCGACGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: RIPSGRQMQFVSLPTFCISFRSG*LRRRSV
Trigger: CACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGA...AATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAGGAATGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTATCCTTCCGCTCCGGCTaGCTCCGGCGACGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLSFRSG*LRRRSV
Trigger: CACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGA...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGTCCTTCCGCTCCGGCTaGCTCCGGCGACGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRSFRSG*LRRRSV
Trigger: CACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGA...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGTCCTTCCGCTCCGGCTaGCTCCGGCGACGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: NGEKASIHPNSPEISPAVSFRSG*LRRRSV
Trigger: CACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGA...CACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGGCGCAGGTGCCTGCGGTTGTTTGGTGTCAAGTTaGTCCTCAATAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GGDRTSSGSKTPGAGACGCLVSS*SSIVSS
Trigger: GGAGGACACTATTGAGGACAAACTTGACACCAAACA...ACCGCAGGCACCTGCGCCGGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GGGCACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACAGCTTCCAGCGGGAGTTaGCTTCTCACCTGTCAGGGC +
Preference number: 5 (lower is better)
Translates to: GHCDLDWRTSLGITALWTASSGS*LLTCQG
Trigger: GCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGC...TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCATCAGGTCGTATAAGTaGGGAGGGAGACGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPIRSYK*GGRRGE
Trigger: CTCTCCCCGTCTCCCTCCCAACTTATACGACCTGAT...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GGATGCCGTTTTGCAAATGTCACCCACCATCAGCCCTCGCTCCGCTGCGGCCGCACTGTGGATGCCGTTTaGCAAATGTCACCCACCATC +
Preference number: 5 (lower is better)
Translates to: GCRFANVTHHQPSLRCGRTVDAV*QMSPTI
Trigger: GATGGTGGGTGACATTTGCAAAACGGCATCCACAGT...GCGGCCGCAGCGGAGCGAGGGCTGATGGTGGGTGACATTTGCAAAACGGCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR CAA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGGGCTCTCTGCGCTTATaGATATCTTCCACAATCGTT +
Preference number: 5 (lower is better)
Translates to: TDAKELRRAVVGSCGALWGSLRL*ISSTIV
Trigger: AACGATTGTGGAAGATATCAATAAGCGCAGAGAGCC...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637173.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: QALKGRRRWRRARVQHFEISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTGGCCCTCCCCCATTGTaGGATCATCAGCTTTATAGG +
Preference number: 5 (lower is better)
Translates to: ALRREHHNAASREGGEQAGPPPL*DHQLYR
Trigger: CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCC...AGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GAGCAGGCACTGAGGGGTAGGGACTGGAATGAAGATAGCAGATTAGTCCTCAGTAGCTGGGAGCGTGCCTaGTCTGGGCCCTCCCCCATT +
Preference number: 5 (lower is better)
Translates to: EQALRGRDWNEDSRLVLSSWERA*SGPSPI
Trigger: AATGGGGGAGGGCCCAGACAAGGCACGCTCCCAGCT...ACTGAGGACTAATCTGCTATCTTCATTCCAGTCCCTACCCCTCAGTGCCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CACAGCTGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCAC +
Preference number: 5 (lower is better)
Translates to: HSCTTGGMRRWERQRGLFTSAMC*WRSAIH
Trigger: GTGGATAGCACTGCGCCACAAGCACATCGCAGAGGT...GAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCAGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGTTTGTCTACGGTGCCTaGGTAATGCTTCATACAGTC +
Preference number: 5 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKFVYGA*VMLHTV
Trigger: GACTGTATGAAGCATTACCAAGGCACCGTAGACAAA...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTCCTTCCGCTCCGGCTaGCTCCGGCGACGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLSFRSG*LRRRSV
Trigger: CACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGA...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGATCCTTCCGCTCCGGCTaGCTCCGGCGACGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGSFRSG*LRRRSV
Trigger: CACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGA...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTAAGCATGAGCACTGTTaGGTCCGAGGGAGGGGACAG +
Preference number: 5 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSKHEHC*VRGRGQ
Trigger: CTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCTT...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: ALRREHHNAASREGGEQAGTVEA*ERVSRV
Trigger: GACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCC...AGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGAGCTGGGAGCGTGCCTaGTCTGGGCCCTCCCCCATT +
Preference number: 5 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRSWERA*SGPSPI
Trigger: AATGGGGGAGGGCCCAGACAAGGCACGCTCCCAGCT...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGCTGGGAGCGTGCCTaGTCTGGGCCCTCCCCCATT +
Preference number: 5 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVSWERA*SGPSPI
Trigger: AATGGGGGAGGGCCCAGACAAGGCACGCTCCCAGCT...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCAC +
Preference number: 5 (lower is better)
Translates to: GMRRWERQRGLFHLGPPETSAMC*WRSAIH
Trigger: GTGGATAGCACTGCGCCACAAGCACATCGCAGAGGT...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCAC +
Preference number: 5 (lower is better)
Translates to: PPEPICSGPFLTLERRRTTSAMC*WRSAIH
Trigger: GTGGATAGCACTGCGCCACAAGCACATCGCAGAGGT...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCACAGAGGTGGGTGGAGTACTaGCTGAGCTCTTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: PRGYRVCVSPTGQEPSPQRWVEY*LSSFWY
Trigger: GTACCAGAAAGAGCTCAGCAAGTACTCCACCCACCT...CTGTGGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGGCTCTGAAAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGTTTGTCTACGGTGCCTaGGTAATGCTTCATACAGTC +
Preference number: 5 (lower is better)
Translates to: QALKGRRRWRRARVQHFEFVYGA*VMLHTV
Trigger: GACTGTATGAAGCATTACCAAGGCACCGTAGACAAA...CTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTTTCAGAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ACGCCCGGCGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTGCGTGCTGGATCAGTTaGTTCAGGTTTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: TPGAGACGSVLRKSGRISACWIS*FRFSSV
Trigger: CACGGAGGAAAACCTGAACAAACTGATCCAGCACGC...ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GGGAGGGAGACGGGGAGAGATCTGACGACTAATCTCAGTGCAAGGGGAGATTTCTACTCGCCTGGGGCCTaGTTCTTATGCCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: GRETGRDLTTNLSARGDFYSPGA*FLCQCP
Trigger: TGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTA...GAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCTCCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAGCTTCCAGCGGGAGTTaGCTTCTCACCTGTCAGGGC +
Preference number: 5 (lower is better)
Translates to: EPICSGPFLTLERRRTREASSGS*LLTCQG
Trigger: GCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGC...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGATCAGGTCGTATAAGTaGGGAGGGAGACGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: KALRREHHNAASREGGEQIRSYK*GGRRGE
Trigger: CTCTCCCCGTCTCCCTCCCAACTTATACGACCTGAT...CTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GGGAGGGAGACGGGGAGAGATCTGACGACTAATCTCAGTGCAAGGGGAGATTTCAAGCATGAGCACTGTTaGGTCCGAGGGAGGGGACAG +
Preference number: 5 (lower is better)
Translates to: GRETGRDLTTNLSARGDFKHEHC*VRGRGQ
Trigger: CTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCTT...GAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCTCCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TCTTATTTAGCACTGTGGATGCCGTTTTGCAAATGTCACCCACCATCAGCCCTCCCGCAACCAGGGAGATaGCAGACTGCGGCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SYLALWMPFCKCHPPSALPQPGR*QTAALG
Trigger: GCCCAGCGCCGCAGTCTGCAATCTCCCTGGTTGCGG...GAGGGCTGATGGTGGGTGACATTTGCAAAACGGCATCCACAGTGCTAAATAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS-3UTR CAA 90 bp CCAGGCCAGCTCCTCACTTGGGGGACACACGGGAGGCCACTCCAGCAGACTGGTCAAATCCTGATCTTCTaGAGACAACTGTCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: PGQLLTWGTHGRPLQQTGQILIF*RQLSEE
Trigger: TTCCTCTGACAGTTGTCTCAAGAAGATCAGGATTTG...ACCAGTCTGCTGGAGTGGCCTCCCGTGTGTCCCCCAAGTGAGGAGCTGGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR CAA 90 bp CAGGGCTGGGGAGGCAACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGGGGAGAAATGCAATATaGATTTCCGTCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: QGWGGNRRKGTEAGGGGKGRNAI*ISVRVL
Trigger: CAAAACTCTGACGGAAATCAATATTGCATTTCTCCC...CTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGTTGCCTCCCCAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSGTVEA*ERVSRV
Trigger: GACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCC...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGACTGGGCCCTCCCCCATaGTTGGATCATCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: LKMLAERVQGLCESNGPRLGPPP*LDHQLY
Trigger: ATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAG...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTAGCTGGGAGCGTGCCTaGTCTGGGCCCTCCCCCATT +
Preference number: 5 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLSWERA*SGPSPI
Trigger: AATGGGGGAGGGCCCAGACAAGGCACGCTCCCAGCT...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCAGGTGGGTGGAGTACTaGCTGAGCTCTTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: MLAERVQGLCESNGPRTFRWVEY*LSSFWY
Trigger: GTACCAGAAAGAGCTCAGCAAGTACTCCACCCACCT...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAGCGTGCTGGATCAGTTaGTTCAGGTTTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: LKMLAERVQGLCESNGPRACWIS*FRFSSV
Trigger: CACGGAGGAAAACCTGAACAAACTGATCCAGCACGC...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGGCGTGCTGGATCAGTTaGTTCAGGTTTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: HYRGYETLGKAKRSVPPWACWIS*FRFSSV
Trigger: CACGGAGGAAAACCTGAACAAACTGATCCAGCACGC...CCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGTCCTTCCGCTCCGGCTaGCTCCGGCGACGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMSFRSG*LRRRSV
Trigger: CACGCTGCGTCGCCGGAGCAAGCCGGAGCGGAAGGA...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGTACTCGCCTGGGGCCTaGTTCTTATGCCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: PNHKKTALREWLPSAFLLYSPGA*FLCQCP
Trigger: TGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTA...CAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp CACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGGGATGGGGGCGTGTTTaGGAGGGGCGACTTATTTTT +
Preference number: 5 (lower is better)
Translates to: HYRGYETLGKAKRSVPPWGWGRV*EGRLIF
Trigger: AAAAATAAGTCGCCCCTCCAAAACACGCCCCCATCC...CCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGGGATGGGGGCGTGTTTaGGAGGGGCGACTTATTTTT +
Preference number: 5 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGGWGRV*EGRLIF
Trigger: AAAAATAAGTCGCCCCTCCAAAACACGCCCCCATCC...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGATGGGGGCGTGTTTaGGAGGGGCGACTTATTTTT +
Preference number: 5 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGAGWGRV*EGRLIF
Trigger: AAAAATAAGTCGCCCCTCCAAAACACGCCCCCATCC...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTGAGGTCTGTTCCACCTaGGACCTCCTGAGATATCCT +
Preference number: 5 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSEVCST*DLLRYP
Trigger: AGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAAAGCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGAGGTCTGTTCCACCTaGGACCTCCTGAGATATCCT +
Preference number: 5 (lower is better)
Translates to: QSLEKRTPQCSEQRGRGAEVCST*DLLRYP
Trigger: AGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC...TGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GGGCACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACAGAGGTCTGTTCCACCTaGGACCTCCTGAGATATCCT +
Preference number: 5 (lower is better)
Translates to: GHCDLDWRTSLGITALWTEVCST*DLLRYP
Trigger: AGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC...TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGATCAGGTCGTATAAGTaGGGAGGGAGACGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PEPICSGPFLTLERRRTRIRSYK*GGRRGE
Trigger: CTCTCCCCGTCTCCCTCCCAACTTATACGACCTGAT...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCAGCTTTCTCCTTCCGTaGCCCAAAGGAAAGCCAGAC +
Preference number: 5 (lower is better)
Translates to: MLAERVQGLCESNGPRTFSFLLP*PKGKPD
Trigger: GTCTGGCTTTCCTTTGGGCAACGGAAGGAGAAAGCT...GAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637173.2
CDS-3UTR CAA 90 bp CTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGGCTCCCCAGGCTTGGCTaGGACTCATCGTCAACAGCA +
Preference number: 5 (lower is better)
Translates to: LITRKLRLGSGCPPHSFWLPRLG*DSSSTA
Trigger: TGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAG...CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp AGCACTGTTTGGTCCGAGGGAGGGGACAGAACAAGCAGCGGGAGTAAGACGCCCGCATCTCACTCTGGTTaGAATTGCATTTCCCTGACC +
Preference number: 5 (lower is better)
Translates to: STVWSEGGDRTSSGSKTPASHSG*NCISLT
Trigger: GGTCAGGGAAATGCAATTCAAACCAGAGTGAGATGC...GGGCGTCTTACTCCCGCTGCTTGTTCTGTCCCCTCCCTCGGACCAAACAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS CCA 90 bp GCTTCTGCTCCCCACCCTCGCTCTCCTTCCAAGCTCGTTTCTGATTaGCTACTTAGTGGTTATTCAAGGAGTCGGCCGACAGGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: ASAPHPRSPSKLVSD*LLSGYSRSRPTGVN
Trigger: GTTCACTCCTGTCGGCCGACTCCTTGAATAACCACTAAGTAGCCAATCAGAAACGAGCTTGGAAGGAGAGCGAGGGTGGGGAGCAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626416.2
CDS-3UTR CAA 90 bp AAGGGAGGCGGAGGTGGCGCCGAGCTCGCGTACAGCACTTTGAGAGGACATCACCATTCCCCCTTCTTCTaGACCTTCTTTATCACATCA +
Preference number: 5 (lower is better)
Translates to: KGGGGGAELAYSTLRGHHHSPFF*TFFITS
Trigger: TGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAATG...GTGATGTCCTCTCAAAGTGCTGTACGCGAGCTCGGCGCCACCTCCGCCTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAAATGATGTCTGTCATCTaGCAGCAGGAGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: RREHHNAASREGGEQALKMMSVI*QQEDSI
Trigger: GATGCTGTCCTCCTGCTGCAAGATGACAGACATCAT...TTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AAGGAAAGCCAGACTGGAGCCCCCTGGACACCGGGAAGGGGTGCTGATTTCTTTATGATGTCTGTCATCTaGCAGCAGGAGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: KESQTGAPWTPGRGADFFMMSVI*QQEDSI
Trigger: GATGCTGTCCTCCTGCTGCAAGATGACAGACATCAT...AAAGAAATCAGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GCCTTGAGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTGGCTCTCTGCGCTTATaGATATCTTCCACAATCGTT +
Preference number: 5 (lower is better)
Translates to: ALRREHHNAASREGGEQAGSLRL*ISSTIV
Trigger: AACGATTGTGGAAGATATCAATAAGCGCAGAGAGCC...AGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCTCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637173.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: LAERVQGLCESNGPRTFSISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...GGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGCTCCTCACTTGGGGGACACACGGGAGGCCACTCCAGCAGACTGGTGCACTGCGGGAGAAATGCAATATaGATTTCCGTCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: SSSLGGHTGGHSSRLVHCGRNAI*ISVRVL
Trigger: CAAAACTCTGACGGAAATCAATATTGCATTTCTCCC...GCAGTGCACCAGTCTGCTGGAGTGGCCTCCCGTGTGTCCCCCAAGTGAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR CAA 90 bp GTGACAGGCTGTGGAGGAGGACGCTGGCCTGACTTCGTGCAGACACCCCAGCCTGGGAGAAATGCAATATaGATTTCCGTCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: VTGCGGGRWPDFVQTPQPGRNAI*ISVRVL
Trigger: CAAAACTCTGACGGAAATCAATATTGCATTTCTCCC...AGGCTGGGGTGTCTGCACGAAGTCAGGCCAGCGTCCTCCTCCACAGCCTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: AIALCSGASRTHLFWSIPGTVEA*ERVSRV
Trigger: GACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCC...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGCTGGGCCCTCCCCCATaGTTGGATCATCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: PEPICSGPFLTLERRRTRLGPPP*LDHQLY
Trigger: ATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAG...CCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACAGAGCTGGGAGCGTGCCTaGTCTGGGCCCTCCCCCATT +
Preference number: 5 (lower is better)
Translates to: FVSNKKRASLNTRMQRQQSWERA*SGPSPI
Trigger: AATGGGGGAGGGCCCAGACAAGGCACGCTCCCAGCT...CTGTTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGAGGTGGGTGGAGTACTaGCTGAGCTCTTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: HCDLDWRTSLGITALWTQRWVEY*LSSFWY
Trigger: GTACCAGAAAGAGCTCAGCAAGTACTCCACCCACCT...CTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAGCTCGCATAGGGTCCTaGATCTTCTCTCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: EPICSGPFLTLERRRTREARIGS*IFSPSA
Trigger: TGCTGAGGGAGAGAAGATCAAGGACCCTATGCGAGC...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GGGCACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACATCCTCCATGATGTCCTaGATAATCGGAGTCCACCGT +
Preference number: 5 (lower is better)
Translates to: GHCDLDWRTSLGITALWTSSMMS*IIGVHR
Trigger: ACGGTGGACTCCGATTATCAAGGACATCATGGAGGA...TGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTTCCTCCATGATGTCCTaGATAATCGGAGTCCACCGT +
Preference number: 5 (lower is better)
Translates to: CLPRGYRVCVSPTGQEPSSSMMS*IIGVHR
Trigger: ACGGTGGACTCCGATTATCAAGGACATCATGGAGGA...AGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCCTCCATGATGTCCTaGATAATCGGAGTCCACCGT +
Preference number: 5 (lower is better)
Translates to: RCLPRGYRVCVSPTGQEPSSMMS*IIGVHR
Trigger: ACGGTGGACTCCGATTATCAAGGACATCATGGAGGA...AGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGATGGGGGCGTGTTTaGGAGGGGCGACTTATTTTT +
Preference number: 5 (lower is better)
Translates to: CTTGGMRRWERQRGLFHLGWGRV*EGRLIF
Trigger: AAAAATAAGTCGCCCCTCCAAAACACGCCCCCATCC...AAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCCCACGGAAGGAGCTaGGAGGCGAGATCTCTTACT +
Preference number: 5 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRAAHGRS*EARSLT
Trigger: AGTAAGAGATCTCGCCTCCAAGCTCCTTCCGTGGGC...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR CAA 90 bp ACAGACGCAAAGGAACTGAGGCGGGCGGTGGTGGGAAGCTGCGGAGCGCTGTGGTTTGGATTTCTTCTTTaGTTAAGTGCCTGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: TDAKELRRAVVGSCGALWFGFLL*LSACSE
Trigger: TTCTGAGCAGGCACTTAACAAAAGAAGAAATCCAAA...CCACAGCGCTCCGCAGCTTCCCACCACCGCCCGCCTCAGTTCCTTTGCGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR CAA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGTCTCCGACAACAGCTTaGAGGCCAATGGGGGCCATG +
Preference number: 5 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRSPTTA*RPMGAM
Trigger: CATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAGA...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTATCTCCGACAACAGCTTaGAGGCCAATGGGGGCCATG +
Preference number: 5 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLSPTTA*RPMGAM
Trigger: CATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAGA...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTATGATGTCTGTCATCTaGCAGCAGGAGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: CTTGGMRRWERQRGLFHLMMSVI*QQEDSI
Trigger: GATGCTGTCCTCCTGCTGCAAGATGACAGACATCAT...AAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCGGCTCTCTGCGCTTATaGATATCTTCCACAATCGTT +
Preference number: 5 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSGSLRL*ISSTIV
Trigger: AACGATTGTGGAAGATATCAATAAGCGCAGAGAGCC...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637173.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GCCATAGCCCTCTGTTCAGGGGCCTCCAGAACCCATCTGTTCTGGTCCATTCCTATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: AIALCSGASRTHLFWSIPISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...AGGAATGGACCAGAACAGATGGGTTCTGGAGGCCCCTGAACAGAGGGCTATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: PPEPICSGPFLTLERRRTGTVEA*ERVSRV
Trigger: GACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCC...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: CTTGGMRRWERQRGLFHLGTVEA*ERVSRV
Trigger: GACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCC...AAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCCTGGGCCCTCCCCCATaGTTGGATCATCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: RRWERQRGLFHLGPPEISLGPPP*LDHQLY
Trigger: ATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAG...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAAGCTGGGAGCGTGCCTaGTCTGGGCCCTCCCCCATT +
Preference number: 5 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRSWERA*SGPSPI
Trigger: AATGGGGGAGGGCCCAGACAAGGCACGCTCCCAGCT...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAAGCTGGGAGCGTGCCTaGTCTGGGCCCTCCCCCATT +
Preference number: 5 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQSWERA*SGPSPI
Trigger: AATGGGGGAGGGCCCAGACAAGGCACGCTCCCAGCT...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCAC +
Preference number: 5 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVTSAMC*WRSAIH
Trigger: GTGGATAGCACTGCGCCACAAGCACATCGCAGAGGT...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ATTCTTTTCTCCCCAGGCTTGGCTTGGACTCATCGTCAACAGCAGCAGCATCATACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCAC +
Preference number: 5 (lower is better)
Translates to: ILFSPGLAWTHRQQQQHHTSAMC*WRSAIH
Trigger: GTGGATAGCACTGCGCCACAAGCACATCGCAGAGGT...ATGATGCTGCTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCAC +
Preference number: 5 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGTSAMC*WRSAIH
Trigger: GTGGATAGCACTGCGCCACAAGCACATCGCAGAGGT...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCAC +
Preference number: 5 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPTSAMC*WRSAIH
Trigger: GTGGATAGCACTGCGCCACAAGCACATCGCAGAGGT...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp CGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTTTGTCTACGGTGCCTaGGTAATGCTTCATACAGTC +
Preference number: 5 (lower is better)
Translates to: RGYETLGKAKRSVPPWTSFVYGA*VMLHTV
Trigger: GACTGTATGAAGCATTACCAAGGCACCGTAGACAAA...GGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGGGCGTGCTGGATCAGTTaGTTCAGGTTTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: LITRKLRLGSGCPPHSFWACWIS*FRFSSV
Trigger: CACGGAGGAAAACCTGAACAAACTGATCCAGCACGC...CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp GAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAGCGTGCTGGATCAGTTaGTTCAGGTTTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: EPICSGPFLTLERRRTREACWIS*FRFSSV
Trigger: CACGGAGGAAAACCTGAACAAACTGATCCAGCACGC...TTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCTGTTTGGTGTCAAGTTaGTCCTCAATAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LAERVQGLCESNGPRTFSCLVSS*SSIVSS
Trigger: GGAGGACACTATTGAGGACAAACTTGACACCAAACA...GGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ACGCCCGGCGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGTTTGGTGTCAAGTTaGTCCTCAATAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: TPGAGACGSVLRKSGRISCLVSS*SSIVSS
Trigger: GGAGGACACTATTGAGGACAAACTTGACACCAAACA...ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GCTGTGAGGGCAGCACTGGACACATTTTCAATCGGTGTTGAGAACTGCAAGCATTACTCGCCTGGGGCCTaGTTCTTATGCCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: AVRAALDTFSIGVENCKHYSPGA*FLCQCP
Trigger: TGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTA...ATGCTTGCAGTTCTCAACACCGATTGAAAATGTGTCCAGTGCTGCCCTCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494254.3
CDS-3UTR CAA 90 bp ACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGAGCTCTCACTCCATTGTaGGAGCCTGATCCTCAAAAG +
Preference number: 5 (lower is better)
Translates to: TTGGMRRWERQRGLFHLGALTPL*EPDPQK
Trigger: CTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGC...TCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR CAA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAAGCATGAGCACTGTTaGGTCCGAGGGAGGGGACAG +
Preference number: 5 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVKHEHC*VRGRGQ
Trigger: CTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCTT...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATCTAGGCAGCACGCTGTaGCTGCTAGGGGCCCAAGAC +
Preference number: 5 (lower is better)
Translates to: FHTQAMCTSPRVMYKVTNLGSTL*LLGAQD
Trigger: GTCTTGGGCCCCTAGCAGCAACAGCGTGCTGCCTAG...ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637173.2
CDS-3UTR CAA 90 bp ACGCCCGGCGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTCATTCCCCCTTCTTCTaGACCTTCTTTATCACATCA +
Preference number: 5 (lower is better)
Translates to: TPGAGACGSVLRKSGRISHSPFF*TFFITS
Trigger: TGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAATG...ACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCGCCGGGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTATGATGTCTGTCATCTaGCAGCAGGAGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGMMSVI*QQEDSI
Trigger: GATGCTGTCCTCCTGCTGCAAGATGACAGACATCAT...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CGCAGGTGCCTGCGGTTCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGAGTTTTGATGACTTaGGCTGCTCGGGATTTTACC +
Preference number: 5 (lower is better)
Translates to: RRCLRFRPKEIRSYKLGGRVLMT*AARDFT
Trigger: GGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCT...CCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGAACCGCAGGCACCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAAGAGTTTTGATGACTTaGGCTGCTCGGGATTTTACC +
Preference number: 5 (lower is better)
Translates to: LKMLAERVQGLCESNGPRRVLMT*AARDFT
Trigger: GGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCT...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: GMRRWERQRGLFHLGPPEISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...CTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GGGAGGGAGACGGGGAGAGATCTGACGACTAATCTCAGTGCAAGGGGAGATTTCATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: GRETGRDLTTNLSARGDFISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...GAAATCTCCCCTTGCACTGAGATTAGTCGTCAGATCTCTCCCCGTCTCCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GCCAGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACAAGCTGGGAGCGTGCCTaGTCTGGGCCCTCCCCCATT +
Preference number: 5 (lower is better)
Translates to: ASHYPDFGICHSHACFHTSWERA*SGPSPI
Trigger: AATGGGGGAGGGCCCAGACAAGGCACGCTCCCAGCT...TGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp ATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCAC +
Preference number: 5 (lower is better)
Translates to: ITGRRRPFILTVQKFLLLTSAMC*WRSAIH
Trigger: GTGGATAGCACTGCGCCACAAGCACATCGCAGAGGT...CAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCAC +
Preference number: 5 (lower is better)
Translates to: RRPFILTVQKFLLLCTNCTSAMC*WRSAIH
Trigger: GTGGATAGCACTGCGCCACAAGCACATCGCAGAGGT...GCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCAC +
Preference number: 5 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLTSAMC*WRSAIH
Trigger: GTGGATAGCACTGCGCCACAAGCACATCGCAGAGGT...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCAGGTGGGTGGAGTACTaGCTGAGCTCTTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: FSVSSSFCGVRMCVDPISRWVEY*LSSFWY
Trigger: GTACCAGAAAGAGCTCAGCAAGTACTCCACCCACCT...GCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR CAA 90 bp AACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGGCTCGCATAGGGTCCTaGATCTTCTCTCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: NGEKASIHPNSPEISPAVARIGS*IFSPSA
Trigger: TGCTGAGGGAGAGAAGATCAAGGACCCTATGCGAGC...CACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCGCTCGCATAGGGTCCTaGATCTTCTCTCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGARIGS*IFSPSA
Trigger: TGCTGAGGGAGAGAAGATCAAGGACCCTATGCGAGC...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTACTCGCCTGGGGCCTaGTTCTTATGCCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFYSPGA*FLCQCP
Trigger: TGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTA...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp AGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCTACTCGCCTGGGGCCTaGTTCTTATGCCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: RRPFILTVQKFLLLCTNCYSPGA*FLCQCP
Trigger: TGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTA...GCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGATACTCGCCTGGGGCCTaGTTCTTATGCCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGYSPGA*FLCQCP
Trigger: TGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTA...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTACTCGCCTGGGGCCTaGTTCTTATGCCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLYSPGA*FLCQCP
Trigger: TGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTA...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp CACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGGATGTGTGTGGATCTTaGTTTCTTTGGCTCTCACTC +
Preference number: 5 (lower is better)
Translates to: HYRGYETLGKAKRSVPPWDVCGS*FLWLSL
Trigger: GAGTGAGAGCCAAAGAAACAAAGATCCACACACATC...CCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR CAA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCCTATCAGCGGATGGGGGCGTGTTTaGGAGGGGCGACTTATTTTT +
Preference number: 5 (lower is better)
Translates to: FSVSSSFCGVRMCVDPISGWGRV*EGRLIF
Trigger: AAAAATAAGTCGCCCCTCCAAAACACGCCCCCATCC...GCTGATAGGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR CAA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCATCAGGTCGTATAAGTaGGGAGGGAGACGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVIRSYK*GGRRGE
Trigger: CTCTCCCCGTCTCCCTCCCAACTTATACGACCTGAT...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGAAGCATGAGCACTGTTaGGTCCGAGGGAGGGGACAG +
Preference number: 5 (lower is better)
Translates to: CSTLDLLRYPDCHLPGYLKHEHC*VRGRGQ
Trigger: CTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCTT...CAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS GCA 90 bp CAGTTTACACTGGGCTGGGACTCGGCCTCCGAAGGTTCAATCTACTaGTGGAAATTCTGCTCTGGAGCAACATGTCTAGGTAGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: QFTLGWDSASEGSIY*WKFCSGATCLGSLP
Trigger: AGGAAGACTACCTAGACATGTTGCTCCAGAGCAGAATTTCCAGCAGTAGATTGAACCTTCGGAGGCCGAGTCCCAGCCCAGTGTAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626333.1
ENST00000630492.2
CDS-3UTR CAA 90 bp ACTTTCCGTTGGCCTGGGTCACCTCGTAGGCGCAGCGCATCTCATTCAGGCTCAGGGAGAAATGCAATATaGATTTCCGTCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: TFRWPGSPRRRSASHSGSGRNAI*ISVRVL
Trigger: CAAAACTCTGACGGAAATCAATATTGCATTTCTCCC...TGAGCCTGAATGAGATGCGCTGCGCCTACGAGGTGACCCAGGCCAACGGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR CAA 90 bp TCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAAATGAGCTGTTGGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: SGPFLTLERRRTRENELLGTVEA*ERVSRV
Trigger: GACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCC...CAACAGCTCATTTTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGGGCCCTCCCCCATTGTaGGATCATCAGCTTTATAGG +
Preference number: 5 (lower is better)
Translates to: PKFLPFHTQAMCTSPRVMGPPPL*DHQLYR
Trigger: CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCC...CATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCGGCCCTCCCCCATTGTaGGATCATCAGCTTTATAGG +
Preference number: 5 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGGPPPL*DHQLYR
Trigger: CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCC...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp TGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCGGCCCTCCCCCATTGTaGGATCATCAGCTTTATAGG +
Preference number: 5 (lower is better)
Translates to: WLSLHCWSLILKRYPRGLGPPPL*DHQLYR
Trigger: CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCC...GAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGCTGGGCCCTCCCCCATaGTTGGATCATCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRLGPPP*LDHQLY
Trigger: ATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAG...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGAGCTGGGAGCGTGCCTaGTCTGGGCCCTCCCCCATT +
Preference number: 5 (lower is better)
Translates to: VLSVKYSKNTDISMILNKSWERA*SGPSPI
Trigger: AATGGGGGAGGGCCCAGACAAGGCACGCTCCCAGCT...CTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGAACCTTCTCCCCGCTGGTCTCATACTaGTATACATCATTTTCGATA +
Preference number: 5 (lower is better)
Translates to: LAERVQGLCESNGPRTFSPLVSY*YTSFSI
Trigger: TATCGAAAATGATGTATACAAGTATGAGACCAGCGG...GGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCAC +
Preference number: 5 (lower is better)
Translates to: GRQMQFVSLPTFCIYENSTSAMC*WRSAIH
Trigger: GTGGATAGCACTGCGCCACAAGCACATCGCAGAGGT...ACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTAACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCAC +
Preference number: 5 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVTSAMC*WRSAIH
Trigger: GTGGATAGCACTGCGCCACAAGCACATCGCAGAGGT...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTAGGTGGGTGGAGTACTaGCTGAGCTCTTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPRWVEY*LSSFWY
Trigger: GTACCAGAAAGAGCTCAGCAAGTACTCCACCCACCT...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp CCTCCAGAACCCATCTGTTCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTTTTGTCTACGGTGCCTaGGTAATGCTTCATACAGTC +
Preference number: 5 (lower is better)
Translates to: PPEPICSGPFLTLERRRTFVYGA*VMLHTV
Trigger: GACTGTATGAAGCATTACCAAGGCACCGTAGACAAA...AGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGAACAGATGGGTTCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGAGCTCGCATAGGGTCCTaGATCTTCTCTCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGARIGS*IFSPSA
Trigger: TGCTGAGGGAGAGAAGATCAAGGACCCTATGCGAGC...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp TGCACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTTGTTTGGTGTCAAGTTaGTCCTCAATAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: CTTGGMRRWERQRGLFHLCLVSS*SSIVSS
Trigger: GGAGGACACTATTGAGGACAAACTTGACACCAAACA...AAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AAAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGAAGCATGAGCACTGTTaGGTCCGAGGGAGGGGACAG +
Preference number: 5 (lower is better)
Translates to: KNTQISTVPYPSNVHVTQKHEHC*VRGRGQ
Trigger: CTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCTT...CTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ACTACCGGGGGTATGAGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGAGGCTCTCTGCGCTTATaGATATCTTCCACAACATGT +
Preference number: 5 (lower is better)
Translates to: TTGGMRRWERQRGLFHLGGSLRL*ISSTTC
Trigger: ACATGTTGTGGAAGATATCAATAAGCGCAGAGAGCC...TCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCTCATACCCCCGGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS TCA 90 bp CAGGTGATGGGCAGCTGCGTTTCTAATTCACTCTTAAACTCCAGGTaGAGCCAGGGAGAGAAATTCCAAACATGGCAAGGCAGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: QVMGSCVSNSLLNSR*SQGEKFQTWQGRER
Trigger: CCTTTCCCTGCCTTGCCATGTTTGGAATTTCTCTCCCTGGCTTCACCTGGAGTTTAAGAGTGAATTAGAAACGCAGCTGCCCATCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628768.1
CDS-3UTR CAA 90 bp CACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGCATTCCCCCTTCTTCTaGACCTTCTTTATCACATCA +
Preference number: 5 (lower is better)
Translates to: HCDLDWRTSLGITALWTQHSPFF*TFFITS
Trigger: TGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAATG...CTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGATGATGTCTGTCATCTaGCAGCAGGAGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: KHPNFYRSIPKQCARHPGMMSVI*QQEDSI
Trigger: GATGCTGTCCTCCTGCTGCAAGATGACAGACATCAT...CCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTATTTGGATGAGAGCAGGATGATGTCTGTCATCTaGCAGCAGGAGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: DLLRYPDCHLPGYLDESRMMSVI*QQEDSI
Trigger: GATGCTGTCCTCCTGCTGCAAGATGACAGACATCAT...CCTGCTCTCATCCAAATAACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTGCTGAGGGCTCTCTGCGCTTATaGATATCTTCCACAATCGTT +
Preference number: 5 (lower is better)
Translates to: QQQQHKWCAHHWRMRAAEGSLRL*ISSTIV
Trigger: AACGATTGTGGAAGATATCAATAAGCGCAGAGAGCC...CTCAGCAGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637173.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGGTVEA*ERVSRV
Trigger: GACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCC...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp AGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCGGCCCTCCCCCATTGTaGGATCATCAGCTTTATAGG +
Preference number: 5 (lower is better)
Translates to: RRPFILTVQKFLLLCTNCGPPPL*DHQLYR
Trigger: CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCC...GCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGCTGGGCCCTCCCCCATaGTTGGATCATCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: ITGRRRPFILTVQKFLLLLGPPP*LDHQLY
Trigger: ATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAG...CAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCCTGGGCCCTCCCCCATaGTTGGATCATCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFLGPPP*LDHQLY
Trigger: ATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAG...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTGGGCCCTCCCCCATaGTTGGATCATCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGLGPPP*LDHQLY
Trigger: ATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAG...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp AGAAGAGAACACCACAATGCAGCGAGCAGAGAGGGCGGGGAGCAGGCTCTGAAACCGCTGGTCTCATACTaGTATACATCATTTTCGATA +
Preference number: 5 (lower is better)
Translates to: RREHHNAASREGGEQALKPLVSY*YTSFSI
Trigger: TATCGAAAATGATGTATACAAGTATGAGACCAGCGG...TTTCAGAGCCTGCTCCCCGCCCTCTCTGCTCGCTGCATTGTGGTGTTCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AAGGAAAGCCAGACTGGAGCCCCCTGGACACCGGGAAGGGGTGCTGATTTCTTTCCGCTGGTCTCATACTaGTATACATCATTTTCGATA +
Preference number: 5 (lower is better)
Translates to: KESQTGAPWTPGRGADFFPLVSY*YTSFSI
Trigger: TATCGAAAATGATGTATACAAGTATGAGACCAGCGG...AAAGAAATCAGCACCCCTTCCCGGTGTCCAGGGGGCTCCAGTCTGGCTTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTGAAGATGCTTGCCGAGAGGGTACAGGGTCTGTGTGAGTCCAACGGGCCAAGACCGCTGGTCTCATACTaGTATACATCATTTTCGATA +
Preference number: 5 (lower is better)
Translates to: LKMLAERVQGLCESNGPRPLVSY*YTSFSI
Trigger: TATCGAAAATGATGTATACAAGTATGAGACCAGCGG...TCTTGGCCCGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGAGGTGGGTGGAGTACTaGCTGAGCTCTTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: ITGRRRPFILTVQKFLLLRWVEY*LSSFWY
Trigger: GTACCAGAAAGAGCTCAGCAAGTACTCCACCCACCT...CAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATGCTCGCATAGGGTCCTaGATCTTCTCTCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: FHTQAMCTSPRVMYKVTNARIGS*IFSPSA
Trigger: TGCTGAGGGAGAGAAGATCAAGGACCCTATGCGAGC...ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGAGCGTGCTGGATCAGTTaGTTCAGGTTTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGACWIS*FRFSSV
Trigger: CACGGAGGAAAACCTGAACAAACTGATCCAGCACGC...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp ACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCTCCTCCATGATGTCCTaGATAATCGGAGTCCACCGT +
Preference number: 5 (lower is better)
Translates to: TVFPKRWRLPAGVCFSPVSSMMS*IIGVHR
Trigger: ACGGTGGACTCCGATTATCAAGGACATCATGGAGGA...GACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCTGATTGTCACCTCCCAGGTTGTTTGGTGTCAAGTTaGTCCTCAATAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: EVCSTLDLLRYPDCHLPGCLVSS*SSIVSS
Trigger: GGAGGACACTATTGAGGACAAACTTGACACCAAACA...ACCTGGGAGGTGACAATCAGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCACATGTACTCGCCTGGGGCCTaGTTCTTATGCCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: SIHPNSPEISPAVHQLHMYSPGA*FLCQCP
Trigger: TGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTA...CATGTGCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTTTCCACTTGGGGAACCTATGAGCAACACTGCACATGTATTCCTGCACATGTATACTCGCCTGGGGCCTaGTTCTTATGCCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: FSTWGTYEQHCTCIPAHVYSPGA*FLCQCP
Trigger: TGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTA...TACATGTGCAGGAATACATGTGCAGTGTTGCTCATAGGTTCCCCAAGTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR CAA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTGCTCTCACTCCATTGTaGGAGCCTGATCCTCAAAAG +
Preference number: 5 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPALTPL*EPDPQK
Trigger: CTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGC...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCGCTCTCACTCCATTGTaGGAGCCTGATCCTCAAAAG +
Preference number: 5 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGALTPL*EPDPQK
Trigger: CTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGC...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp AGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCGGATGGGGGCGTGTTTaGGAGGGGCGACTTATTTTT +
Preference number: 5 (lower is better)
Translates to: RRPFILTVQKFLLLCTNCGWGRV*EGRLIF
Trigger: AAAAATAAGTCGCCCCTCCAAAACACGCCCCCATCC...GCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGGAGGTCTGTTCCACCTaGGACCTCCTGAGATATCCT +
Preference number: 5 (lower is better)
Translates to: CVQQFLWGEDVCGSLFLWEVCST*DLLRYP
Trigger: AGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC...CCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR CAA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTGCTTCCAGCGGGAGTTaGCTTCTCACCTGTCAGGGC +
Preference number: 5 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFASSGS*LLTCQG
Trigger: GCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGC...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATCTTAAATAACGGGAAGCATGAGCACTGTTaGGTCCGAGGGAGGGGACAG +
Preference number: 5 (lower is better)
Translates to: QCARHPGLCTRSQILNNGKHEHC*VRGRGQ
Trigger: CTGTCCCCTCCCTCGGACCAAACAGTGCTCATGCTT...CCCGTTATTTAAGATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTAGGCGGCAGATGCAGTTaGTCAGTTTGCCAACATTCT +
Preference number: 5 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLGGRCS*SVCQHS
Trigger: AGAATGTTGGCAAACTGACAAACTGCATCTGCCGCC...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp CGCATTCCTTCTGGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTGGCGGCAGATGCAGTTaGTCAGTTTGCCAACATTCT +
Preference number: 5 (lower is better)
Translates to: RIPSGRQMQFVSLPTFCIGGRCS*SVCQHS
Trigger: AGAATGTTGGCAAACTGACAAACTGCATCTGCCGCC...AATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCCAGAAGGAATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS TCA 90 bp TGTGTGGATCTTTGTTTCTTTGGCTCTCACTCCATTGTTGGAGCCTaGTCCTCAAAAGATACCCTAGAGGACTCCCTGAAGTCGGGGTGT +
Preference number: 5 (lower is better)
Translates to: CVDLCFFGSHSIVGA*SSKDTLEDSLKSGC
Trigger: ACACCCCGACTTCAGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAACAAAGATCCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp TTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGTCTCCGACAACAGCTTaGAGGCCAATGGGGGCCATG +
Preference number: 5 (lower is better)
Translates to: FCIYENSLLFTHVASRILSPTTA*RPMGAM
Trigger: CATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAGA...CAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGAATGATGTCTGTCATCTaGCAGCAGGAGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGMMSVI*QQEDSI
Trigger: GATGCTGTCCTCCTGCTGCAAGATGACAGACATCAT...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTAATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTGTCAGATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: CFSKEMEASSGSLLLTCQISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...CTGACAGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CACTGTGACTTAGACTGGAGGACTTCCCTCGGGATCACAGCACTGTGGACACAGGGGAGAAATGCAATATaGATTTCCGTCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: HCDLDWRTSLGITALWTQGRNAI*ISVRVL
Trigger: CAAAACTCTGACGGAAATCAATATTGCATTTCTCCC...CTGTGTCCACAGTGCTGTGATCCCGAGGGAAGTCCTCCAGTCTAAGTCACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGCACCAATTGCGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: RRPFILTVQKFLLLCTNCGTVEA*ERVSRV
Trigger: GACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCC...GCAATTGGTGCACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATCTGGGCCCTCCCCCATaGTTGGATCATCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: FHTQAMCTSPRVMYKVTNLGPPP*LDHQLY
Trigger: ATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAG...ATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACATTTAGCTGGGAGCGTGCCTaGTCTGGGCCCTCCCCCATT +
Preference number: 5 (lower is better)
Translates to: SHYPDFGICHSHACFHTFSWERA*SGPSPI
Trigger: AATGGGGGAGGGCCCAGACAAGGCACGCTCCCAGCT...AAATGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp AGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTAGGTGGGTGGAGTACTaGCTGAGCTCTTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: SVSSSFCGVRMCVDLCFFRWVEY*LSSFWY
Trigger: GTACCAGAAAGAGCTCAGCAAGTACTCCACCCACCT...AAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTTTGTCTACGGTGCCTaGGTAATGCTTCATACAGTC +
Preference number: 5 (lower is better)
Translates to: QMYLITRKLRLGSGCPPHFVYGA*VMLHTV
Trigger: GACTGTATGAAGCATTACCAAGGCACCGTAGACAAA...ATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp CAATGTGCACGTCACCCAGGGTTATGTACAAGGTCACAAATCTTAAATAACGGGGCTCGCATAGGGTCCTaGATCTTCTCTCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: QCARHPGLCTRSQILNNGARIGS*IFSPSA
Trigger: TGCTGAGGGAGAGAAGATCAAGGACCCTATGCGAGC...CCCGTTATTTAAGATTTGTGACCTTGTACATAACCCTGGGTGACGTGCACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AAAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGCGTGCTGGATCAGTTaGTTCAGGTTTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: KNTQISTVPYPSNVHVTQACWIS*FRFSSV
Trigger: CACGGAGGAAAACCTGAACAAACTGATCCAGCACGC...CTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTACAGCCCTTTGTATTTGCGTGCTGGATCAGTTaGTTCAGGTTTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: LLLLSKSSSSELLQPFVFACWIS*FRFSSV
Trigger: CACGGAGGAAAACCTGAACAAACTGATCCAGCACGC...AAATACAAAGGGCTGTAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp AGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGCGTGCTGGATCAGTTaGTTCAGGTTTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: SVSSSFCGVRMCVDLCFFACWIS*FRFSSV
Trigger: CACGGAGGAAAACCTGAACAAACTGATCCAGCACGC...AAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTCCTCCATGATGTCCTaGATAATCGGAGTCCACCGT +
Preference number: 5 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFSSMMS*IIGVHR
Trigger: ACGGTGGACTCCGATTATCAAGGACATCATGGAGGA...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTTGTTTGGTGTCAAGTTaGTCCTCAATAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRACLVSS*SSIVSS
Trigger: GGAGGACACTATTGAGGACAAACTTGACACCAAACA...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCGCTCTCACTCCATTGTaGGAGCCTGATCCTCAAAAG +
Preference number: 5 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFALTPL*EPDPQK
Trigger: CTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGC...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp AGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGGCTTCCAGCGGGAGTTaGCTTCTCACCTGTCAGGGC +
Preference number: 5 (lower is better)
Translates to: SVKYSKNTDISMILNKDRASSGS*LLTCQG
Trigger: GCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGC...CCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CACCGGGAAGGGGTGCTGATTTCTTTATTTATTAGACTCAAGTGCTTTAGTACAGCTTCCAGCGGGAGTTaGCTTCTCACCTGTCAGGGC +
Preference number: 5 (lower is better)
Translates to: HREGVLISLFIRLKCFSTASSGS*LLTCQG
Trigger: GCCCTGACAGGTGAGAAGCAAACTCCCGCTGGAAGC...TGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TCTGGTCCATTCCTGACCCTTGAACGAAGGCGGACTAGGGAAAATGAGCTGTTGCACTTGATGGACGTTTaGGTTATTTTCCACTTGGGG +
Preference number: 5 (lower is better)
Translates to: SGPFLTLERRRTRENELLHLMDV*VIFHLG
Trigger: CCCCAAGTGGAAAATAACCAAAACGTCCATCAAGTG...CAACAGCTCATTTTCCCTAGTCCGCCTTCGTTCAAGGGTCAGGAATGGACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS CCA 90 bp GAGGATGTGTGTGGATCTTTGTTTCTTTGGCTCTCACTCCATTGTTaGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: EDVCGSLFLWLSLHC*SLILKRYPRGLPEV
Trigger: GACTTCAGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAACAAAGATCCACACACATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp AGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTATGATGTCTGTCATCTaGCAGCAGGAGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: SVSSSFCGVRMCVDLCFFMMSVI*QQEDSI
Trigger: GATGCTGTCCTCCTGCTGCAAGATGACAGACATCAT...AAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTGGCTCTCTGCGCTTATaGATATCTTCCACAATCGTT +
Preference number: 5 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPGSLRL*ISSTIV
Trigger: AACGATTGTGGAAGATATCAATAAGCGCAGAGAGCC...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp AACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAATTTCTCCTGCTGTGAGAGTTTTGATGACTTaGGCTGCTCGGGATTTTACC +
Preference number: 5 (lower is better)
Translates to: NGEKASIHPNSPEISPAVRVLMT*AARDFT
Trigger: GGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCT...CACAGCAGGAGAAATTTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp AGACGCTGGGAAAGGCAAAGAGGTCTGTTCCACCTTGGACCTCCTGAGATATCCGGGAGAAATGCAATATaGATTTCCGTCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: RRWERQRGLFHLGPPEISGRNAI*ISVRVL
Trigger: CAAAACTCTGACGGAAATCAATATTGCATTTCTCCC...GGATATCTCAGGAGGTCCAAGGTGGAACAGACCTCTTTGCCTTTCCCAGCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAGGCCCTCCCCCATTGTaGGATCATCAGCTTTATAGG +
Preference number: 5 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQGPPPL*DHQLYR
Trigger: CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCC...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TCATCATCATCATCATCATCATCATCATCAATGGCTGAGCCCTCACTGTGCTTCGGCCCTCCCCCATTGTaGGATCATCAGCTTTATAGG +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSSSMAEPSLCFGPPPL*DHQLYR
Trigger: CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCC...GAAGCACAGTGAGGGCTCAGCCATTGATGATGATGATGATGATGATGATGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp GATACTGAGTTGATCACGACCCTCACTCTTTCAGCCTGCAACATTGAAGCTTTAAGGTGGGTGGAGTACTaGCTGAGCTCTTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: DTELITTLTLSACNIEALRWVEY*LSSFWY
Trigger: GTACCAGAAAGAGCTCAGCAAGTACTCCACCCACCT...TAAAGCTTCAATGTTGCAGGCTGAAAGAGTGAGGGTCGTGATCAACTCAGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
CDS-3UTR CAA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCTTTGTCTACGGTGCCTaGGTAATGCTTCATACAGTC +
Preference number: 5 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGFVYGA*VMLHTV
Trigger: GACTGTATGAAGCATTACCAAGGCACCGTAGACAAA...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp GAAGAAGAGGACTCCCTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTATTTGTCTACGGTGCCTaGGTAATGCTTCATACAGTC +
Preference number: 5 (lower is better)
Translates to: EEEDSLLLLSKSSSSELLFVYGA*VMLHTV
Trigger: GACTGTATGAAGCATTACCAAGGCACCGTAGACAAA...TAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAGGGAGTCCTCTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp AAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTTGTCTACGGTGCCTaGGTAATGCTTCATACAGTC +
Preference number: 5 (lower is better)
Translates to: KHPNFYRSIPKQCARHPGFVYGA*VMLHTV
Trigger: GACTGTATGAAGCATTACCAAGGCACCGTAGACAAA...CCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCGCTCGCATAGGGTCCTaGATCTTCTCTCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LPTFCIYENSLLFTHVASARIGS*IFSPSA
Trigger: TGCTGAGGGAGAGAAGATCAAGGACCCTATGCGAGC...GGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAAGCTCGCATAGGGTCCTaGATCTTCTCTCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: SQILNNGEKASIHPNSPEARIGS*IFSPSA
Trigger: TGCTGAGGGAGAGAAGATCAAGGACCCTATGCGAGC...TTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GCTGTGAGGGCAGCACTGGACACATTTTCAATCGGTGTTGAGAACTGCAAGCATTGTTTGGTGTCAAGTTaGTCCTCAATAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: AVRAALDTFSIGVENCKHCLVSS*SSIVSS
Trigger: GGAGGACACTATTGAGGACAAACTTGACACCAAACA...ATGCTTGCAGTTCTCAACACCGATTGAAAATGTGTCCAGTGCTGCCCTCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494254.3
CDS-3UTR CAA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTTGTTTGGTGTCAAGTTaGTCCTCAATAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPCLVSS*SSIVSS
Trigger: GGAGGACACTATTGAGGACAAACTTGACACCAAACA...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp TTGGTCAGCTGCTTAATTGATCACAGGTTCACATTATTGCTAACAGGCTTCAGATACTCGCCTGGGGCCTaGTTCTTATGCCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: LVSCLIDHRFTLLLTGFRYSPGA*FLCQCP
Trigger: TGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTA...TCTGAAGCCTGTTAGCAATAATGTGAACCTGTGATCAATTAAGCAGCTGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TCCGTCCTAAGGAAATCAGGTCGTATAAGTTGGGAGGGAGACGGGGAGAGATCTTGGATCTTTGTTTCTTaGGCTCTCACTCCATTGTTG +
Preference number: 5 (lower is better)
Translates to: SVLRKSGRISWEGDGERSWIFVS*ALTPLL
Trigger: CAACAATGGAGTGAGAGCCAAAGAAACAAAGATCCA...AGATCTCTCCCCGTCTCCCTCCCAACTTATACGACCTGATTTCCTTAGGACGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGGCTTCAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCCACAGGTTCACATTATaGCTAACAGGCTTCAGATGT +
Preference number: 5 (lower is better)
Translates to: QASDVPNHKKTALREWLPHRFTL*LTGFRC
Trigger: ACATCTGAAGCCTGTTAGCAATAATGTGAACCTGTG...GGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTGAAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp CAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATAGCTTCTACAGCCCTTaGTATTTACTGGGTAGAAAG +
Preference number: 5 (lower is better)
Translates to: QMYLITRKLRLGSGCPPHSFYSP*YLLGRK
Trigger: CTTTCTACCCAGTAAATACAAAGGGCTGTAGAAGCT...ATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAACACCTGACCACAGACTaGCTGGCTCACAGGACATGC +
Preference number: 5 (lower is better)
Translates to: KNTDISMILNKDRNNPKQHLTTD*LAHRTC
Trigger: GCATGTCCTGTGAGCCAGCAAGTCTGTGGTCAGGTG...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS TCA 90 bp CAGCAAAGACAGCAACCAAGTTTCTCTGAATGTCTCGTGTGGGGCTaGAGGGTCTCCTTGATAAACAACTGCATTTTCCCAGGTGGAATA +
Preference number: 5 (lower is better)
Translates to: QQRQQPSFSECLVWG*RVSLINNCIFPGGI
Trigger: TATTCCACCTGGGAAAATGCAGTTGTTTATCAAGGAGACCCTTCAGCCCCACACGAGACATTCAGAGAAACTTGGTTGCTGTCTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626333.1
CDS-3UTR CAA 90 bp GTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGGCCATTCCCCCTTCTTCTaGACCTTCTTTATCACATCA +
Preference number: 5 (lower is better)
Translates to: VSSSFCGVRMCVDLCFFGHSPFF*TFFITS
Trigger: TGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAATG...GCCAAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTGGCTCTCTGCGCTTATaGATATCTTCCACAATCGTT +
Preference number: 5 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLGSLRL*ISSTIV
Trigger: AACGATTGTGGAAGATATCAATAAGCGCAGAGAGCC...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp CTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTAGAGTTTTGATGACTTaGGCTGCTCGGGATTTTACC +
Preference number: 5 (lower is better)
Translates to: LTVFPKRWRLPAGVCFSPRVLMT*AARDFT
Trigger: GGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCT...AGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ATTTATTCTTTTCTCCCCAGGCTTGGCTTGGACTCATCGTCAACAGCAGCAGCAAGAGTTTTGATGACTTaGGCTGCTCGGGATTTTACC +
Preference number: 5 (lower is better)
Translates to: IYSFLPRLGLDSSSTAAARVLMT*AARDFT
Trigger: GGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCT...TGCTGCTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAGAATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTAGAGTTTTGATGACTTaGGCTGCTCGGGATTTTACC +
Preference number: 5 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLRVLMT*AARDFT
Trigger: GGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCT...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTAATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGGCTTCAGATGTACCTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCGGGAGAAATGCAATATaGATTTCCGTCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: QASDVPNHKKTALREWLPGRNAI*ISVRVL
Trigger: CAAAACTCTGACGGAAATCAATATTGCATTTCTCCC...GGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAGGTACATCTGAAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRGTVEA*ERVSRV
Trigger: GACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCC...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp TCACGACAACAGCAGCAGCACAAATGGTGTGCTCACCACTGGAGAATGAGAGCTCCGCTGGTCTCATACTaGTATACATCATTTTCGATA +
Preference number: 5 (lower is better)
Translates to: SRQQQQHKWCAHHWRMRAPLVSY*YTSFSI
Trigger: TATCGAAAATGATGTATACAAGTATGAGACCAGCGG...AGCTCTCATTCTCCAGTGGTGAGCACACCATTTGTGCTGCTGCTGTTGTCGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGATTTGTCTACGGTGCCTaGGTAATGCTTCATACAGTC +
Preference number: 5 (lower is better)
Translates to: LWLSLHCWSLILKRYPRGFVYGA*VMLHTV
Trigger: GACTGTATGAAGCATTACCAAGGCACCGTAGACAAA...TCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp GTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGCTCGCATAGGGTCCTaGATCTTCTCTCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: VLSVKYSKNTDISMILNKARIGS*IFSPSA
Trigger: TGCTGAGGGAGAGAAGATCAAGGACCCTATGCGAGC...CTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTGGTCAGCTGCTTAATTGATCACAGGTTCACATTATTGCTAACAGGCTTCAGAGCTCGCATAGGGTCCTaGATCTTCTCTCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LVSCLIDHRFTLLLTGFRARIGS*IFSPSA
Trigger: TGCTGAGGGAGAGAAGATCAAGGACCCTATGCGAGC...TCTGAAGCCTGTTAGCAATAATGTGAACCTGTGATCAATTAAGCAGCTGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp GAAGATAGCAGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTGCTCGCATAGGGTCCTaGATCTTCTCTCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: EDSRLVLSVKYSKNTDISARIGS*IFSPSA
Trigger: TGCTGAGGGAGAGAAGATCAAGGACCCTATGCGAGC...AGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCTGCTATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGATCCTCCATGATGTCCTaGATAATCGGAGTCCACCGT +
Preference number: 5 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRSSMMS*IIGVHR
Trigger: ACGGTGGACTCCGATTATCAAGGACATCATGGAGGA...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp CAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTGTTTGGTGTCAAGTTaGTCCTCAATAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: QCVQQFLWGEDVCGSLFLCLVSS*SSIVSS
Trigger: GGAGGACACTATTGAGGACAAACTTGACACCAAACA...AAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp CTAACTGTTTTTCCAAAGAGATGGAGGCTTCCAGCGGGAGTTTGCTTCTCACCTTGTTTGGTGTCAAGTTaGTCCTCAATAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LTVFPKRWRLPAGVCFSPCLVSS*SSIVSS
Trigger: GGAGGACACTATTGAGGACAAACTTGACACCAAACA...AGGTGAGAAGCAAACTCCCGCTGGAAGCCTCCATCTCTTTGGAAAAACAGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATATACTCGCCTGGGGCCTaGTTCTTATGCCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: DSLPAFAALVSALELSFIYSPGA*FLCQCP
Trigger: TGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTA...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTGGATCTTTGTTTCTTaGGCTCTCACTCCATTGTTG +
Preference number: 5 (lower is better)
Translates to: KHPNFYRSIPKQCARHPGWIFVS*ALTPLL
Trigger: CAACAATGGAGTGAGAGCCAAAGAAACAAAGATCCA...CCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR CAA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTGATGTGTGTGGATCTTaGTTTCTTTGGCTCTCACTC +
Preference number: 5 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLDVCGS*FLWLSL
Trigger: GAGTGAGAGCCAAAGAAACAAAGATCCACACACATC...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp GTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGATCAGGTCGTATAAGTaGGGAGGGAGACGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: VLSVKYSKNTDISMILNKIRSYK*GGRRGE
Trigger: CTCTCCCCGTCTCCCTCCCAACTTATACGACCTGAT...CTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GAAGATAGCAGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATCAGGTCGTATAAGTaGGGAGGGAGACGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: EDSRLVLSVKYSKNTDISIRSYK*GGRRGE
Trigger: CTCTCCCCGTCTCCCTCCCAACTTATACGACCTGAT...AGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCTGCTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCTGACTGCCCACGGAAGGAGCTaGGAGGCGAGATCTCTTACT +
Preference number: 5 (lower is better)
Translates to: TPHNTRYYEVSETEDNLTAHGRS*EARSLT
Trigger: AGTAAGAGATCTCGCCTCCAAGCTCCTTCCGTGGGC...AGTCAGATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS-3UTR CAA 90 bp AGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTCTCCCCAGGCTTGGCTaGGACTCATCGTCAACAGCA +
Preference number: 5 (lower is better)
Translates to: RCSLSVCQHSAFMRTVCCLPRLG*DSSSTA
Trigger: TGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAG...ACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp CTAATCACAAGAAAACTGCGCTTAGGGAGTGGCTGCCCTCCGCATTCCTTCTGGTTATCTGTTCTCTTCTaGATGAGCATTGGGCTTTTT +
Preference number: 5 (lower is better)
Translates to: LITRKLRLGSGCPPHSFWLSVLF*MSIGLF
Trigger: AAAAAGCCCAATGCTCATCAAGAAGAGAACAGATAA...CCAGAAGGAATGCGGAGGGCAGCCACTCCCTAAGCGCAGTTTTCTTGTGATTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp ATTTATTCTTTTCTCCCCAGGCTTGGCTTGGACTCATCGTCAACAGCAGCAGCAGCTTTTTATGAGGTTTaGAAGTGCCGTGGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: IYSFLPRLGLDSSSTAAAAFYEV*KCRGLP
Trigger: TGGCAAACCACGGCACTTCAAAACCTCATAAAAAGC...TGCTGCTGCTGTTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAGAATAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS TCA 90 bp AAATTCTGCTCTGGAGCAACATGTCTAGGTAGTCTTCCTCTTTCCTaGCAGCAAAGACAGCAACCAAGTTTCTCTGAATGTCTCGTGTGG +
Preference number: 5 (lower is better)
Translates to: KFCSGATCLGSLPLS*QQRQQPSFSECLVW
Trigger: CCACACGAGACATTCAGAGAAACTTGGTTGCTGTCTTTGCTGTCAGGAAAGAGGAAGACTACCTAGACATGTTGCTCCAGAGCAGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626333.1
CDS CCA 90 bp CTTCTTGACCTTCTTTATCACATCATGCATAATCTCAGTTTACACTaGGCTGGGACTCGGCCTCCGAAGGTTCAATCTACTGCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: LLDLLYHIMHNLSLH*AGTRPPKVQSTAGN
Trigger: ATTTCCAGCAGTAGATTGAACCTTCGGAGGCCGAGTCCCAGCCCAGTGTAAACTGAGATTATGCATGATGTGATAAAGAAGGTCAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626333.1
ENST00000630492.2
CDS-3UTR CAA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTCATTCCCCCTTCTTCTaGACCTTCTTTATCACATCA +
Preference number: 5 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLHSPFF*TFFITS
Trigger: TGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAATG...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp TTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACAGGGCTCTCTGCGCTTATaGATATCTTCCACAATCGTT +
Preference number: 5 (lower is better)
Translates to: FVSNKKRASLNTRMQRQQGSLRL*ISSTIV
Trigger: AACGATTGTGGAAGATATCAATAAGCGCAGAGAGCC...CTGTTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637173.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp CTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCCCTGGGAGAAATGCAATATaGATTTCCGTCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: LSLHCWSLILKRYPRGLPGRNAI*ISVRVL
Trigger: CAAAACTCTGACGGAAATCAATATTGCATTTCTCCC...AGGGAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp GAAGATAGCAGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTGGCCCTCCCCCATTGTaGGATCATCAGCTTTATAGG +
Preference number: 5 (lower is better)
Translates to: EDSRLVLSVKYSKNTDISGPPPL*DHQLYR
Trigger: CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCC...AGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCTGCTATCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGCCGCTGGTCTCATACTaGTATACATCATTTTCGATA +
Preference number: 5 (lower is better)
Translates to: PKFLPFHTQAMCTSPRVMPLVSY*YTSFSI
Trigger: TATCGAAAATGATGTATACAAGTATGAGACCAGCGG...CATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GCTTTGGAAAGAGTCAGCAGAGTCCAAGGAATAGACCTGGGATTCATACGGGAGCCGCTGGTCTCATACTaGTATACATCATTTTCGATA +
Preference number: 5 (lower is better)
Translates to: ALERVSRVQGIDLGFIREPLVSY*YTSFSI
Trigger: TATCGAAAATGATGTATACAAGTATGAGACCAGCGG...CTCCCGTATGAATCCCAGGTCTATTCCTTGGACTCTGCTGACTCTTTCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637060.2
ENST00000637464.2
CDS-3UTR CAA 90 bp ATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAAACCTCTGCGATGTGCTaGTGGCGCAGTGCTATCCAC +
Preference number: 5 (lower is better)
Translates to: ISPQCEILQEHRHLYDSQTSAMC*WRSAIH
Trigger: GTGGATAGCACTGCGCCACAAGCACATCGCAGAGGT...TTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTGGTCAGCTGCTTAATTGATCACAGGTTCACATTATTGCTAACAGGCTTCAGAAGGTGGGTGGAGTACTaGCTGAGCTCTTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: LVSCLIDHRFTLLLTGFRRWVEY*LSSFWY
Trigger: GTACCAGAAAGAGCTCAGCAAGTACTCCACCCACCT...TCTGAAGCCTGTTAGCAATAATGTGAACCTGTGATCAATTAAGCAGCTGACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp AATTTCTCCTGCTGTGCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGAGGTGGGTGGAGTACTaGCTGAGCTCTTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: NFSCCAPIAHELLFLGYMRWVEY*LSSFWY
Trigger: GTACCAGAAAGAGCTCAGCAAGTACTCCACCCACCT...CATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGCACAGCAGGAGAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCTTTTTTGTCTACGGTGCCTaGGTAATGCTTCATACAGTC +
Preference number: 5 (lower is better)
Translates to: SVSSSFCGVRMCVDLCFFFVYGA*VMLHTV
Trigger: GACTGTATGAAGCATTACCAAGGCACCGTAGACAAA...AAAGAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATAGCTCGCATAGGGTCCTaGATCTTCTCTCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: DSLPAFAALVSALELSFIARIGS*IFSPSA
Trigger: TGCTGAGGGAGAGAAGATCAAGGACCCTATGCGAGC...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGGCGTGCTGGATCAGTTaGTTCAGGTTTTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: SVKYSKNTDISMILNKDRACWIS*FRFSSV
Trigger: CACGGAGGAAAACCTGAACAAACTGATCCAGCACGC...CCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGTCCTCCATGATGTCCTaGATAATCGGAGTCCACCGT +
Preference number: 5 (lower is better)
Translates to: RQMQFVSLPTFCIYENSLSSMMS*IIGVHR
Trigger: ACGGTGGACTCCGATTATCAAGGACATCATGGAGGA...CAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp AAGGATGATGCGGATTTTGTCATAAGTGCTGACATTGGCATCCAGCAGAATGGGTGTTTGGTGTCAAGTTaGTCCTCAATAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: KDDADFVISADIGIQQNGCLVSS*SSIVSS
Trigger: GGAGGACACTATTGAGGACAAACTTGACACCAAACA...CCCATTCTGCTGGATGCCAATGTCAGCACTTATGACAAAATCCGCATCATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636509.2
ENST00000637060.2
ENST00000637464.2
CDS-3UTR CAA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGGATCTTTGTTTCTTaGGCTCTCACTCCATTGTTG +
Preference number: 5 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLWIFVS*ALTPLL
Trigger: CAACAATGGAGTGAGAGCCAAAGAAACAAAGATCCA...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp AAAAACACCCAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGATGTGTGTGGATCTTaGTTTCTTTGGCTCTCACTC +
Preference number: 5 (lower is better)
Translates to: KNTQISTVPYPSNVHVTQDVCGS*FLWLSL
Trigger: GAGTGAGAGCCAAAGAAACAAAGATCCACACACATC...CTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTGGGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373302.8
ENST00000650920.1
CDS-3UTR CAA 90 bp TTGGTCAGCTGCTTAATTGATCACAGGTTCACATTATTGCTAACAGGCTTCAGACTTTTCTCCCCAGGCTaGGCTTGGACTCATCGTCAA +
Preference number: 5 (lower is better)
Translates to: LVSCLIDHRFTLLLTGFRLFSPG*AWTHRQ
Trigger: TTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAG...TCTGAAGCCTGTTAGCAATAATGTGAACCTGTGATCAATTAAGCAGCTGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAACAGCCTCCTCACCGTCACTaGGCATTATCAGAGATTAAA +
Preference number: 5 (lower is better)
Translates to: FVSNKKRASLNTRMQRQQPPHRH*ALSEIK
Trigger: TTTAATCTCTGATAATGCCAAGTGACGGTGAGGAGG...CTGTTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR CAA 90 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTCATTCCCCCTTCTTCTaGACCTTCTTTATCACATCA +
Preference number: 5 (lower is better)
Translates to: GRQMQFVSLPTFCIYENSHSPFF*TFFITS
Trigger: TGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAATG...ACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAATGATGTCTGTCATCTaGCAGCAGGAGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: KNTDISMILNKDRNNPKQMMSVI*QQEDSI
Trigger: GATGCTGTCCTCCTGCTGCAAGATGACAGACATCAT...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GAAGATAGCAGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATGTCTGTCATCTaGCAGCAGGAGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: EDSRLVLSVKYSKNTDISMMSVI*QQEDSI
Trigger: GATGCTGTCCTCCTGCTGCAAGATGACAGACATCAT...AGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCTGCTATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTGGTCAGCTGCTTAATTGATCACAGGTTCACATTATTGCTAACAGGCTTCAGAATGATGTCTGTCATCTaGCAGCAGGAGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: LVSCLIDHRFTLLLTGFRMMSVI*QQEDSI
Trigger: GATGCTGTCCTCCTGCTGCAAGATGACAGACATCAT...TCTGAAGCCTGTTAGCAATAATGTGAACCTGTGATCAATTAAGCAGCTGACCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGCGGCAAGGCTCTCTGCGCTTATaGATATCTTCCACAATCGTT +
Preference number: 5 (lower is better)
Translates to: SFVSNKKRASLNTRMQRQGSLRL*ISSTIV
Trigger: AACGATTGTGGAAGATATCAATAAGCGCAGAGAGCC...TTGCCGCTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637173.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAAGAGTTTTGATGACTTaGGCTGCTCGGGATTTTACC +
Preference number: 5 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQRVLMT*AARDFT
Trigger: GGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCT...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAAGAGTTTTGATGACTTaGGCTGCTCGGGATTTTACC +
Preference number: 5 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRRVLMT*AARDFT
Trigger: GGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCT...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp CACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: HRHLYDSQQGQEQPQTRFISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...AAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTGGGAGAAATGCAATATaGATTTCCGTCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLGRNAI*ISVRVL
Trigger: CAAAACTCTGACGGAAATCAATATTGCATTTCTCCC...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: QMQFVSLPTFCIYENSLLGTVEA*ERVSRV
Trigger: GACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCC...CAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp AAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: KNTDISMILNKDRNNPKQGTVEA*ERVSRV
Trigger: GACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCC...TTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTTGTTTCCCGCTGGTCTCATACTaGTATACATCATTTTCGATA +
Preference number: 5 (lower is better)
Translates to: FSVSSSFCGVRMCVDLCFPLVSY*YTSFSI
Trigger: TATCGAAAATGATGTATACAAGTATGAGACCAGCGG...GAAACAAAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp AGTTTCTTCAGTGTGTCCAGCAGTTTCTGTGGGGTGAGGATGTGTGTGGATCTTCCGCTGGTCTCATACTaGTATACATCATTTTCGATA +
Preference number: 5 (lower is better)
Translates to: SFFSVSSSFCGVRMCVDLPLVSY*YTSFSI
Trigger: TATCGAAAATGATGTATACAAGTATGAGACCAGCGG...AAGATCCACACACATCCTCACCCCACAGAAACTGCTGGACACACTGAAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373302.8
ENST00000637521.2
ENST00000650920.1
CDS-3UTR CAA 90 bp ACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCTGACTAGGTGGGTGGAGTACTaGCTGAGCTCTTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: TPHNTRYYEVSETEDNLTRWVEY*LSSFWY
Trigger: GTACCAGAAAGAGCTCAGCAAGTACTCCACCCACCT...AGTCAGATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTGATATCTTCCACAACATGTGATCCAGCAATCCTGCTCCTTATTATTCACCAAGAGGTCTGTTCCACCTaGGACCTCCTGAGATATCCT +
Preference number: 5 (lower is better)
Translates to: LISSTTCDPAILLLIIHQEVCST*DLLRYP
Trigger: AGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC...TTGGTGAATAATAAGGAGCAGGATTGCTGGATCACATGTTGTGGAAGATATCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR CAA 90 bp ATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAAATCAGGTCGTATAAGTaGGGAGGGAGACGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: ISPQCEILQEHRHLYDSQIRSYK*GGRRGE
Trigger: CTCTCCCCGTCTCCCTCCCAACTTATACGACCTGAT...TTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGAGGACTCTTTTACTTTGTTTCTTaGGCTCTCACTCCATTGTTG +
Preference number: 5 (lower is better)
Translates to: WLSLHCWSLILKRYPRGLFYFVS*ALTPLL
Trigger: CAACAATGGAGTGAGAGCCAAAGAAACAAAGTAAAA...GAGTCCTCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp CATTGGGTGAATACACAGTTTATCTGTTCTCTTCTTGATGAGCATTGGGCTTTTCTTTTCTCCCCAGGCTaGGCTTGGACTCATCGTCAA +
Preference number: 5 (lower is better)
Translates to: HWVNTQFICSLLDEHWAFLFSPG*AWTHRQ
Trigger: TTGACGATGAGTCCAAGCCAAGCCTGGGGAGAAAAG...AAAAGCCCAATGCTCATCAAGAAGAGAACAGATAAACTGTGTATTCACCCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp CAAATTTCTACCGTTCCATACCCAAGCAATGTGCACGTCACCCAGGGTTATGTAAATCATTATCCTCCCTaGAATGGTGAGCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: QISTVPYPSNVHVTQGYVNHYPP*NGELFS
Trigger: AGAGAAGAGCTCACCATTCAAGGGAGGATAATGATT...TACATAACCCTGGGTGACGTGCACATTGCTTGGGTATGGAACGGTAGAAATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR CAA 90 bp AGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTATGATGTCTGTCATCTaGCAGCAGGAGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: RCSLSVCQHSAFMRTVCCMMSVI*QQEDSI
Trigger: GATGCTGTCCTCCTGCTGCAAGATGACAGACATCAT...ACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp CGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGGGCTCTCTGCGCTTATaGATATCTTCCACAATCGTT +
Preference number: 5 (lower is better)
Translates to: RQMQFVSLPTFCIYENSLGSLRL*ISSTIV
Trigger: AACGATTGTGGAAGATATCAATAAGCGCAGAGAGCC...CAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGAGTGGCTCTCTGCGCTTATaGATATCTTCCACAATCGTT +
Preference number: 5 (lower is better)
Translates to: CIYENSLLFTHVASRILSGSLRL*ISSTIV
Trigger: AACGATTGTGGAAGATATCAATAAGCGCAGAGAGCC...ACTCAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTGGGAGAAATGCAATATaGATTTCCGTCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: GRQMQFVSLPTFCIYENSGRNAI*ISVRVL
Trigger: CAAAACTCTGACGGAAATCAATATTGCATTTCTCCC...ACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TTGAGGATGGCGAGACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGGGAGAAATGCAATATaGATTTCCGTCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: LRMARQPSCICCFSFCFRGRNAI*ISVRVL
Trigger: CAAAACTCTGACGGAAATCAATATTGCATTTCTCCC...TCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTCTCGCCATCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CATTGGGTGAATACACAGTTTATCTGTTCTCTTCTTGATGAGCATTGGGCTTTTGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: HWVNTQFICSLLDEHWAFGTVEA*ERVSRV
Trigger: GACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCC...AAAAGCCCAATGCTCATCAAGAAGAGAACAGATAAACTGTGTATTCACCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTAGGCCCTCCCCCATTGTaGGATCATCAGCTTTATAGG +
Preference number: 5 (lower is better)
Translates to: CSLSVCQHSAFMRTVCCLGPPPL*DHQLYR
Trigger: CCTATAAAGCTGATGATCCAACAATGGGGGAGGGCC...TAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTACTGGGCCCTCCCCCATaGTTGGATCATCAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: CSLSVCQHSAFMRTVCCLLGPPP*LDHQLY
Trigger: ATAAAGCTGATGATCCAACAATGGGGGAGGGCCCAG...TAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp CTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTACAGCCCTTTGTATTTCCGCTGGTCTCATACTaGTATACATCATTTTCGATA +
Preference number: 5 (lower is better)
Translates to: LLLLSKSSSSELLQPFVFPLVSY*YTSFSI
Trigger: TATCGAAAATGATGTATACAAGTATGAGACCAGCGG...AAATACAAAGGGCTGTAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp ATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAAAGGTGGGTGGAGTACTaGCTGAGCTCTTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: ISPQCEILQEHRHLYDSQRWVEY*LSSFWY
Trigger: GTACCAGAAAGAGCTCAGCAAGTACTCCACCCACCT...TTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTATAAGATACTCTTTGCTCGCATAGGGTCCTaGATCTTCTCTCCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: APIAHELLFLGYMYKILFARIGS*IFSPSA
Trigger: TGCTGAGGGAGAGAAGATCAAGGACCCTATGCGAGC...AAAGAGTATCTTATACATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGTGTTTGGTGTCAAGTTaGTCCTCAATAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: RQMQFVSLPTFCIYENSLCLVSS*SSIVSS
Trigger: GGAGGACACTATTGAGGACAAACTTGACACCAAACA...CAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAACAGTCCAGAATGTTTGGTGTCAAGTTaGTCCTCAATAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SQILNNGEKASIHPNSPECLVSS*SSIVSS
Trigger: GGAGGACACTATTGAGGACAAACTTGACACCAAACA...TTCTGGACTGTTAGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTATTTTCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGGAGGTCTGTTCCACCTaGGACCTCCTGAGATATCCT +
Preference number: 5 (lower is better)
Translates to: LFSFVSNKKRASLNTRMQEVCST*DLLRYP
Trigger: AGGATATCTCAGGAGGTCCAAGGTGGAACAGACCTC...CTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGGCAGCCTGAGTTGCAGTTACATAGAGGTTCACATTTTCGTTATTCAATAGTTGGTAGGCAGCCTGAGTaGCAGTTACATAGAGGTTCA +
Preference number: 5 (lower is better)
Translates to: RQPELQLHRGSHFRYSIVGRQPE*QLHRGS
Trigger: TGAACCTCTATGTAACTGCAACTCAGGCTGCCTACC...AACTATTGAATAACGAAAATGTGAACCTCTATGTAACTGCAACTCAGGCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS-3UTR CAA 90 bp GATACTGAGTTGATCACGACCCTCACTCTTTCAGCCTGCAACATTGAAGCTTTAAGCTTCTACAGCCCTTaGTATTTACTGGGTAGAAAG +
Preference number: 5 (lower is better)
Translates to: DTELITTLTLSACNIEALSFYSP*YLLGRK
Trigger: CTTTCTACCCAGTAAATACAAAGGGCTGTAGAAGCT...TAAAGCTTCAATGTTGCAGGCTGAAAGAGTGAGGGTCGTGATCAACTCAGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636962.2
CDS-3UTR CAA 90 bp ACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAACAAGGTTTTGGCTCTCTGCGCTTATaGATATCTTCCACAATCGTT +
Preference number: 5 (lower is better)
Translates to: TDISMILNKDRNNPKQGFGSLRL*ISSTIV
Trigger: AACGATTGTGGAAGATATCAATAAGCGCAGAGAGCC...AAAACCTTGTTTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637173.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CACCGGGAAGGGGTGCTGATTTCTTTATTTATTAGACTCAAGTGCTTTAGTACAAGAGTTTTGATGACTTaGGCTGCTCGGGATTTTACC +
Preference number: 5 (lower is better)
Translates to: HREGVLISLFIRLKCFSTRVLMT*AARDFT
Trigger: GGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCT...TGTACTAAAGCACTTGAGTCTAATAAATAAAGAAATCAGCACCCCTTCCCGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000626539.3
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTAGAGTTTTGATGACTTaGGCTGCTCGGGATTTTACC +
Preference number: 5 (lower is better)
Translates to: LCTRSQILNNGEKASIHPRVLMT*AARDFT
Trigger: GGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCT...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: RCSLSVCQHSAFMRTVCCISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...ACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAAGGGAGAAATGCAATATaGATTTCCGTCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQGRNAI*ISVRVL
Trigger: CAAAACTCTGACGGAAATCAATATTGCATTTCTCCC...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTATTTTCTTTTGTTTCAAACAAGAAGAGGGCATCACTGAACACGAGAATGCAGGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: LFSFVSNKKRASLNTRMQGTVEA*ERVSRV
Trigger: GACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCC...CTGCATTCTCGTGTTCAGTGATGCCCTCTTCTTGTTTGAAACAAAAGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACAACCCCAACCGCTGGTCTCATACTaGTATACATCATTTTCGATA +
Preference number: 5 (lower is better)
Translates to: LQEHRHLYDSQQGQEQPQPLVSY*YTSFSI
Trigger: TATCGAAAATGATGTATACAAGTATGAGACCAGCGG...TTGGGGTTGTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTTCTTTGGCTCTCACTCCATTGTTGGAGCCTGATCCTCAAAAGATACCCTAGACCGCTGGTCTCATACTaGTATACATCATTTTCGATA +
Preference number: 5 (lower is better)
Translates to: FLWLSLHCWSLILKRYPRPLVSY*YTSFSI
Trigger: TATCGAAAATGATGTATACAAGTATGAGACCAGCGG...TCTAGGGTATCTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGCCAAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS-3UTR CAA 90 bp ATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAATCCTCCATGATGTCCTaGATAATCGGAGTCCACCGT +
Preference number: 5 (lower is better)
Translates to: ISPQCEILQEHRHLYDSQSSMMS*IIGVHR
Trigger: ACGGTGGACTCCGATTATCAAGGACATCATGGAGGA...TTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TGTATGACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATTCCTCCATGATGTCCTaGATAATCGGAGTCCACCGT +
Preference number: 5 (lower is better)
Translates to: CMTPHNTRYYEVSETEDNSSMMS*IIGVHR
Trigger: ACGGTGGACTCCGATTATCAAGGACATCATGGAGGA...ATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTATCCTCCATGATGTCCTaGATAATCGGAGTCCACCGT +
Preference number: 5 (lower is better)
Translates to: CSLSVCQHSAFMRTVCCLSSMMS*IIGVHR
Trigger: ACGGTGGACTCCGATTATCAAGGACATCATGGAGGA...TAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TTGGTCAGCTGCTTAATTGATCACAGGTTCACATTATTGCTAACAGGCTTCAGATGTTTGGTGTCAAGTTaGTCCTCAATAGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LVSCLIDHRFTLLLTGFRCLVSS*SSIVSS
Trigger: GGAGGACACTATTGAGGACAAACTTGACACCAAACA...TCTGAAGCCTGTTAGCAATAATGTGAACCTGTGATCAATTAAGCAGCTGACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp ATAAAGAAAAAGAGTGACGGAATAATCAAAGAAAGCCCTTCAGAGTGGAAGAGTGCTCTCACTCCATTGTaGGAGCCTGATCCTCAAAAG +
Preference number: 5 (lower is better)
Translates to: IKKKSDGIIKESPSEWKSALTPL*EPDPQK
Trigger: CTTTTGAGGATCAGGCTCCAACAATGGAGTGAGAGC...ACTCTTCCACTCTGAAGGGCTTTCTTTGATTATTCCGTCACTCTTTTTCTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494254.3
CDS-3UTR CAA 90 bp CTGCTTCTACTGAGCAAAAGCAGCAGCTCTGAGCTTCTACAGCCCTTTGTATTTTTATCTGTTCTCTTCTaGATGAGCATTGGGCTTTTT +
Preference number: 5 (lower is better)
Translates to: LLLLSKSSSSELLQPFVFLSVLF*MSIGLF
Trigger: AAAAAGCCCAATGCTCATCAAGAAGAGAACAGATAA...AAATACAAAGGGCTGTAGAAGCTCAGAGCTGCTGCTTTTGCTCAGTAGAAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp GGGCGGCAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTATGCAGTTTGTCAGTTaGCCAACATTCTGCATTTAT +
Preference number: 5 (lower is better)
Translates to: GRQMQFVSLPTFCIYENSMQFVS*PTFCIY
Trigger: ATAAATGCAGAATGTTGGCAAACTGACAAACTGCAT...ACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTGCCGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TTATGTACAAGGTCACAAATCTTAAATAACGGGGAGAAGGCGTCCATTCATCCTGTCTTAGCACACAGGTaGCTGGAAGAATTCGTTATG +
Preference number: 5 (lower is better)
Translates to: LCTRSQILNNGEKASIHPVLAHR*LEEFVM
Trigger: CATAACGAATTCTTCCAGCAACCTGTGTGCTAAGAC...AGGATGAATGGACGCCTTCTCCCCGTTATTTAAGATTTGTGACCTTGTACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS-3UTR CAA 90 bp GTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGCATTCCCCCTTCTTCTaGACCTTCTTTATCACATCA +
Preference number: 5 (lower is better)
Translates to: VLSVKYSKNTDISMILNKHSPFF*TFFITS
Trigger: TGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAATG...CTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CATTGGGTGAATACACAGTTTATCTGTTCTCTTCTTGATGAGCATTGGGCTTTTAGAGTTTTGATGACTTaGGCTGCTCGGGATTTTACC +
Preference number: 5 (lower is better)
Translates to: HWVNTQFICSLLDEHWAFRVLMT*AARDFT
Trigger: GGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCT...AAAAGCCCAATGCTCATCAAGAAGAGAACAGATAAACTGTGTATTCACCCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TGTATGACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATATTTCCGTCAGAGTTTaGATGACTTTGGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: CMTPHNTRYYEVSETEDNISVRV*MTLAAR
Trigger: CCGAGCAGCCAAAGTCATCAAAACTCTGACGGAAAT...ATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCCCGCTGGTCTCATACTaGTATACATCATTTTCGATA +
Preference number: 5 (lower is better)
Translates to: LPTFCIYENSLLFTHVASPLVSY*YTSFSI
Trigger: TATCGAAAATGATGTATACAAGTATGAGACCAGCGG...GGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp TGCATTTATGAGAACAGTTTGCTGTTTACCCATGTAGCCTCCAGGATACTGAGTATTTATGAGAACAGTTaGCTGTTTACCCATGTAGCC +
Preference number: 5 (lower is better)
Translates to: CIYENSLLFTHVASRILSIYENS*LFTHVA
Trigger: GGCTACATGGGTAAACAGCAAACTGTTCTCATAAAT...ACTCAGTATCCTGGAGGCTACATGGGTAAACAGCAAACTGTTCTCATAAATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp CATTGGGTGAATACACAGTTTATCTGTTCTCTTCTTGATGAGCATTGGGCTTTTGCTTTTTATGAGGTTTaGAAGTGCCGTGGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: HWVNTQFICSLLDEHWAFAFYEV*KCRGLP
Trigger: TGGCAAACCACGGCACTTCAAAACCTCATAAAAAGC...AAAAGCCCAATGCTCATCAAGAAGAGAACAGATAAACTGTGTATTCACCCAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp CATTGGGTGAATACACAGTTTATCTGTTCTCTTCTTGATGAGCATTGGGCTTTTCATTCCCCCTTCTTCTaGACCTTCTTTATCACATCA +
Preference number: 5 (lower is better)
Translates to: HWVNTQFICSLLDEHWAFHSPFF*TFFITS
Trigger: TGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAATG...AAAAGCCCAATGCTCATCAAGAAGAGAACAGATAAACTGTGTATTCACCCAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp GACAGCCTTCCTGCATTTGCTGCTTTAGTTTCTGCTTTAGAGCTAAGTTTTATACATTCCCCCTTCTTCTaGACCTTCTTTATCACATCA +
Preference number: 5 (lower is better)
Translates to: DSLPAFAALVSALELSFIHSPFF*TFFITS
Trigger: TGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAATG...TATAAAACTTAGCTCTAAAGCAGAAACTAAAGCAGCAAATGCAGGAAGGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp AGATTAGTCCTCAGTGTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCCATTCCCCCTTCTTCTaGACCTTCTTTATCACATCA +
Preference number: 5 (lower is better)
Translates to: RLVLSVKYSKNTDISMILHSPFF*TFFITS
Trigger: TGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAATG...GAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCACACTGAGGACTAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp GTGAAATACTCCAAGAACACAGACATCTCTATGATTCTCAACAAGGACAGGAACGGGAGAAATGCAATATaGATTTCCGTCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: VKYSKNTDISMILNKDRNGRNAI*ISVRVL
Trigger: CAAAACTCTGACGGAAATCAATATTGCATTTCTCCC...GTTCCTGTCCTTGTTGAGAATCATAGAGATGTCTGTGTTCTTGGAGTATTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp TGTATGACCCCACACAACACAAGGTATTATGAAGTATCTGAAACTGAGGATAATCATTCCCCCTTCTTCTaGACCTTCTTTATCACATCA +
Preference number: 5 (lower is better)
Translates to: CMTPHNTRYYEVSETEDNHSPFF*TFFITS
Trigger: TGATGTGATAAAGAAGGTCAAGAAGAAGGGGGAATG...ATTATCCTCAGTTTCAGATACTTCATAATACCTTGTGTTGTGTGGGGTCATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp CAGATGCAGTTTGTCAGTTTGCCAACATTCTGCATTTATGAGAACAGTTTGCTGATGCAGTTTGTCAGTTaGCCAACATTCTGCATTTAT +
Preference number: 5 (lower is better)
Translates to: QMQFVSLPTFCIYENSLLMQFVS*PTFCIY
Trigger: ATAAATGCAGAATGTTGGCAAACTGACAAACTGCAT...CAGCAAACTGTTCTCATAAATGCAGAATGTTGGCAAACTGACAAACTGCATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp AGTCACTATCCTGACTTTGGTATTTGTCATTCCCATGCATGTTTTCACACATTTATTTATGAGAACAGTTaGCTGTTTACCCATGTAGCC +
Preference number: 5 (lower is better)
Translates to: SHYPDFGICHSHACFHTFIYENS*LFTHVA
Trigger: GGCTACATGGGTAAACAGCAAACTGTTCTCATAAAT...AAATGTGTGAAAACATGCATGGGAATGACAAATACCAAAGTCAGGATAGTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635950.2
ENST00000636962.2
CDS-3UTR CAA 90 bp GCACCAATTGCACATGAGCTTCTCTTTTTAGGATACATGTATAAGATACTCTTTGGGAGAAATGCAATATaGATTTCCGTCAGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: APIAHELLFLGYMYKILFGRNAI*ISVRVL
Trigger: CAAAACTCTGACGGAAATCAATATTGCATTTCTCCC...AAAGAGTATCTTATACATGTATCCTAAAAAGAGAAGCTCATGTGCAATTGGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000626539.3
ENST00000636509.2
ENST00000637060.2
ENST00000637173.2
ENST00000637464.2
ENST00000637953.1
ENST00000650920.1
CDS-3UTR CAA 90 bp ATAAAGAAAAAGAGTGACGGAATAATCAAAGAAAGCCCTTCAGAGTGGAAGAGTTTTTACTTTGTTTCTTaGGCTCTCACTCCATTGTTG +
Preference number: 5 (lower is better)
Translates to: IKKKSDGIIKESPSEWKSFYFVS*ALTPLL
Trigger: CAACAATGGAGTGAGAGCCAAAGAAACAAAGTAAAA...ACTCTTCCACTCTGAAGGGCTTTCTTTGATTATTCCGTCACTCTTTTTCTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494254.3
CDS GCA 72 bp GGGCGCAGGGTACCCAGGCCTCCTCTTTCCCGTCGGTaGTGGGATCCCTGGCCACAGGCTACCGACGCGCTC +
Preference number: 6 (lower is better)
Translates to: GRRVPRPPLSRR*WDPWPQATDAL
Trigger: GAGCGCGTCGGTAGCCTGTGGCCAGGGATCCCAGCACCGACGGGAAAGAGGAGGCCTGGGTACCCTGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS CCA 72 bp CGCAGGGTACCCAGGCCTCCTCTTTCCCGTCGGTGCTaGGATCCCTGGCCACAGGCTACCGACGCGCTCCAT +
Preference number: 6 (lower is better)
Translates to: RRVPRPPLSRRC*DPWPQATDALH
Trigger: ATGGAGCGCGTCGGTAGCCTGTGGCCAGGGATCCCAGCACCGACGGGAAAGAGGAGGCCTGGGTACCCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS CCA 72 bp CACTTGGGGGACACACGGGAGGCCACTCCAGCAGACTaGTGCACTGCCTTACCCCCGATACCGCACAGCCGG +
Preference number: 6 (lower is better)
Translates to: HLGDTREATPAD*CTALPPIPHSR
Trigger: CCGGCTGTGCGGTATCGGGGGTAAGGCAGTGCACCAGTCTGCTGGAGTGGCCTCCCGTGTGTCCCCCAAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS CCA 72 bp CCCAGGCCTCCTCTTTCCCGTCGGTGCTGGGATCCCTaGCCACAGGCTACCGACGCGCTCCATCTGCCTGAA +
Preference number: 6 (lower is better)
Translates to: PRPPLSRRCWDP*PQATDALHLPE
Trigger: TTCAGGCAGATGGAGCGCGTCGGTAGCCTGTGGCCAGGGATCCCAGCACCGACGGGAAAGAGGAGGCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS GCA 72 bp GGACACACGGGAGGCCACTCCAGCAGACTGGTGCACTaGCTTACCCCCGATACCGCACAGCCGGGTACTCCT +
Preference number: 6 (lower is better)
Translates to: GHTGGHSSRLVH*LTPDTAQPGTP
Trigger: AGGAGTACCCGGCTGTGCGGTATCGGGGGTAAGGCAGTGCACCAGTCTGCTGGAGTGGCCTCCCGTGTGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496504.3
CDS CCA 72 bp CTCTGGGAGCCAGCCAGTTGGTACTGCCCTGGTGGGTaGGACCTCAGGTGTGAGAGGGAAAGGGCCAGGGGA +
Preference number: 6 (lower is better)
Translates to: LWEPASWYCPGG*DLRCERERARG
Trigger: TCCCCTGGCCCTTTCCCTCTCACACCTGAGGTCCCACCCACCAGGGCAGTACCAACTGGCTGGCTCCCAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628768.1
CDS GCA 72 bp GGGATCCCTGGCCACAGGCTACCGACGCGCTCCATCTaGCTGAAACCCCGCTCGGGTCCTGTCTTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: GIPGHRLPTRSI*LKPRSGPVFPL
Trigger: AAGAGGAAAGACAGGACCCGAGCGGGGTTTCAGGCAGATGGAGCGCGTCGGTAGCCTGTGGCCAGGGATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS GCA 72 bp CTCAGGCAGGGTCCCAGGCTGCACCAAGGAACGAGCTaGCTCACCATCAGGGTGCAGAGCCATCTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: LRQGPRLHQGTS*LTIRVQSHLQV
Trigger: CACCTGCAGATGGCTCTGCACCCTGATGGTGAGGCAGCTCGTTCCTTGGTGCAGCCTGGGACCCTGCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628768.1
CDS TCA 72 bp TCCCTGGCCACAGGCTACCGACGCGCTCCATCTGCCTaGAACCCCGCTCGGGTCCTGTCTTTCCTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: SLATGYRRAPSA*NPARVLSFLFL
Trigger: CAGAAAGAGGAAAGACAGGACCCGAGCGGGGTTTCAGGCAGATGGAGCGCGTCGGTAGCCTGTGGCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626539.3
ENST00000636509.2
CDS CCA 72 bp CTGGGAGAATCCACTGACCTCTGGGAGCCAGCCAGTTaGTACTGCCCTGGTGGGTGGGACCTCAGGTGTGAG +
Preference number: 6 (lower is better)
Translates to: LGESTDLWEPAS*YCPGGWDLRCE
Trigger: CTCACACCTGAGGTCCCACCCACCAGGGCAGTACCAACTGGCTGGCTCCCAGAGGTCAGTGGATTCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628768.1
CDS TCA 72 bp GGGCGGCGGACACCGAAGCTCTCCTCATCTCCCGAGTaGTTTCAGGGGTTCAGGATCCTGATAAGTCCCCGC +
Preference number: 6 (lower is better)
Translates to: GRRTPKLSSSPE*FQGFRILISPR
Trigger: GCGGGGACTTATCAGGATCCTGAACCCCTGAAATCACTCGGGAGATGAGGAGAGCTTCGGTGTCCGCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS GCA 72 bp GAATCCACTGACCTCTGGGAGCCAGCCAGTTGGTACTaGCCTGGTGGGTGGGACCTCAGGTGTGAGAGGGAA +
Preference number: 6 (lower is better)
Translates to: ESTDLWEPASWY*PGGWDLRCERE
Trigger: TTCCCTCTCACACCTGAGGTCCCACCCACCAGGGCAGTACCAACTGGCTGGCTCCCAGAGGTCAGTGGATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628768.1
CDS CAA 72 bp ATCCTGATAAGTCCCCGCCTCTCTCCGACAACAGCTTaGAGGCCAATGGGGGCCATGGCGCTGCGCGAGTCT +
Preference number: 6 (lower is better)
Translates to: ILISPRLSPTTA*RPMGAMALRES
Trigger: AGACTCGCGCAGCGCCATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAGAGAGGCGGGGACTTATCAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476182.3
CDS CCA 72 bp GGTGCCTGGGAGAGGAAGTTGATAGGCAAAGCCCCCTaGGAGAATCCACTGACCTCTGGGAGCCAGCCAGTT +
Preference number: 6 (lower is better)
Translates to: GAWERKLIGKAP*ENPLTSGSQPV
Trigger: AACTGGCTGGCTCCCAGAGGTCAGTGGATTCTCCCAGGGGGCTTTGCCTATCAACTTCCTCTCCCAGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628768.1
CDS CAA 90 bp GGTAGGGGGACCATGTGTGGAAAGCATGGTGCCTGGGAGAGGAAGTaGATAGGCAAAGCCCCCTGGGAGAATCCACTGACCTCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: GRGTMCGKHGAWERK*IGKAPWENPLTSGS
Trigger: GCTCCCAGAGGTCAGTGGATTCTCCCAGGGGGCTTTGCCTATCAACTTCCTCTCCCAGGCACCATGCTTTCCACACATGGTCCCCCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000628768.1
CDS CAA 90 bp CCAGCAACTCCATTCCTAGGTATATATCTCTCTCCGACAACAGCTTaGAGGCCAATGGGGGCCATGGCGCTGCGCGAGTCTCCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: PATPFLGIYLSPTTA*RPMGAMALRESPGS
Trigger: GGAGCCGGGAGACTCGCGCAGCGCCATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAGAGAGATATATACCTAGGAATGGAGTTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637173.2
ENST00000650920.1
CDS CAA 90 bp CCCATGGCCAGGTCCATGGACAGTGGAACCGCACTGGCTCCAGAGTaGAGACAGCATGATCTAGCAGGCCTTCCCGTCTCTATTTCCTAT +
Preference number: 6 (lower is better)
Translates to: PMARSMDSGTALAPE*RQHDLAGLPVSISY
Trigger: ATAGGAAATAGAGACGGGAAGGCCTGCTAGATCATGCTGTCTCAACTCTGGAGCCAGTGCGGTTCCACTGTCCATGGACCTGGCCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636509.2
CDS CCA 72 bp TTTATCACATCATGCATAATCTCTGCGGCCCAGCTCTaGGCTCTCCCCACAGCATCCTTTGCCTTGCCTCCC +
Preference number: 6 (lower is better)
Translates to: FITSCIISAAQL*ALPTASFALPP
Trigger: GGGAGGCAAGGCAAAGGATGCTGTGGGGAGAGCCCAGAGCTGGGCCGCAGAGATTATGCATGATGTGATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637521.2
CDS CAA 72 bp CCATTCCTAGGTATATATCTCTCTCCGACAACAGCTTaGAGGCCAATGGGGGCCATGGCGCTGCGCGAGTCT +
Preference number: 6 (lower is better)
Translates to: PFLGIYLSPTTA*RPMGAMALRES
Trigger: AGACTCGCGCAGCGCCATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAGAGAGATATATACCTAGGAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637173.2
ENST00000650920.1
CDS TCA 72 bp TATCACATCATGCATAATTCTCTCCGACAACAGCTTTaGGGCCAATGGGGGCCATGGCGCTGCGCGAGTCTC +
Preference number: 6 (lower is better)
Translates to: YHIMHNSLRQQL*GQWGPWRCASL
Trigger: GAGACTCGCGCAGCGCCATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAGAGAATTATGCATGATGTGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627871.2
CDS CCA 72 bp CCCCACCCTCGCTCTCCTTCCAAGCTCGTTTCTGATTaGCTACTTAGTGGTTATTCAAGGAGTCGGCCGACA +
Preference number: 6 (lower is better)
Translates to: PHPRSPSKLVSD*LLSGYSRSRPT
Trigger: TGTCGGCCGACTCCTTGAATAACCACTAAGTAGCCAATCAGAAACGAGCTTGGAAGGAGAGCGAGGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626416.2
CDS CAA 72 bp ATCACATCATGCATAATCTTCTCTCCGACAACAGCTTaGAGGCCAATGGGGGCCATGGCGCTGCGCGAGTCT +
Preference number: 6 (lower is better)
Translates to: ITSCIIFSPTTA*RPMGAMALRES
Trigger: AGACTCGCGCAGCGCCATGGCCCCCATTGGCCTCAAAGCTGTTGTCGGAGAGAAGATTATGCATGATGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000373299.5
ENST00000373302.8
ENST00000635950.2
ENST00000636962.2
ENST00000637060.2
ENST00000637464.2
ENST00000637953.1
CDS CCA 72 bp GGCTGGGACTCGGCCTCCGAAGGTTCAATCTACTGCTaGAAATTCTGCTCTGGAGCAACATGTCTAGGTAGT +
Preference number: 6 (lower is better)
Translates to: GWDSASEGSIYC*KFCSGATCLGS
Trigger: ACTACCTAGACATGTTGCTCCAGAGCAGAATTTCCAGCAGTAGATTGAACCTTCGGAGGCCGAGTCCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626333.1
ENST00000630492.2
CDS CAA 72 bp TGCGCCTCTCAGGAGCTTCTGGTCTTAGCACACAGGTaGCTGGAAGAATTCGTTATGCCCTCGGTCATGATG +
Preference number: 6 (lower is better)
Translates to: CASQELLVLAHR*LEEFVMPSVMM
Trigger: CATCATGACCGAGGGCATAACGAATTCTTCCAGCAACCTGTGTGCTAAGACCAGAAGCTCCTGAGAGGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS CAA 90 bp AGCCCTGGATTTGGTGCTAGGGATTCAGTGATGAACAAGATAGCCTaGCGCCTCTCAGGAGCTTCTGGTCTTAGCACACAGGTTGCTGGA +
Preference number: 6 (lower is better)
Translates to: SPGFGARDSVMNKIA*RLSGASGLSTQVAG
Trigger: TCCAGCAACCTGTGTGCTAAGACCAGAAGCTCCTGAGAGGCGCAAGGCTATCTTGTTCATCACTGAATCCCTAGCACCAAATCCAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637464.2
CDS TCA 72 bp CGGCTCTCTGCGCTTATTGATATCTTCCACAACATGTaGTCCAGCAATCCTGCTCTCGTTATGCCCTCGGTC +
Preference number: 6 (lower is better)
Translates to: RLSALIDIFHNM*SSNPALVMPSV
Trigger: GACCGAGGGCATAACGAGAGCAGGATTGCTGGATCACATGTTGTGGAAGATATCAATAAGCGCAGAGAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637060.2
CDS CAA 72 bp GTTTGTTTCCAAGGGAGTGCTTTATGGGCCTGGCATTaGGCACCTGAAGTGTTAACGGCTAATGACGAAGGC +
Preference number: 6 (lower is better)
Translates to: VCFQGSALWAWH*APEVLTANDEG
Trigger: GCCTTCGTCATTAGCCGTTAACACTTCAGGTGCCAAATGCCAGGCCCATAAAGCACTCCCTTGGAAACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626416.2
CDS GCA 72 bp TCGGCCTCCGAAGGTTCAATCTACTGCTGGAAATTCTaGTCTGGAGCAACATGTCTAGGTAGTCTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: SASEGSIYCWKF*SGATCLGSLPL
Trigger: AAGAGGAAGACTACCTAGACATGTTGCTCCAGAGCAGAATTTCCAGCAGTAGATTGAACCTTCGGAGGCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626333.1
ENST00000630492.2
CDS GCA 72 bp TATGATTCTGCTCCACTCGGCAGAGTTTGTCTACGGTaGCTTGGTAATGCTTCATACAGTCCTCAGCAAGGT +
Preference number: 6 (lower is better)
Translates to: YDSAPLGRVCLR*LGNASYSPQQG
Trigger: ACCTTGCTGAGGACTGTATGAAGCATTACCAAGGCACCGTAGACAAACTCTGCCGAGTGGAGCAGAATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636509.2
CDS CAA 72 bp ATTCTTCATCTGAGCCTTGTGGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTCCAAGGAATAGACCTT +
Preference number: 6 (lower is better)
Translates to: ILHLSLVGTVEA*ERVSRVQGIDL
Trigger: AAGGTCTATTCCTTGGACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCCCACAAGGCTCAGATGAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626416.2
CDS GCA 72 bp AAGAATGTGAGTAGAACTACATTCATGCAATACATATaGAAGCAGGGAGCAGAGAGCTTTATCACCGGGGCT +
Preference number: 6 (lower is better)
Translates to: KNVSRTTFMQYI*KQGAESFITGA
Trigger: AGCCCCGGTGATAAAGCTCTCTGCTCCCTGCTTGCATATGTATTGCATGAATGTAGTTCTACTCACATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647107.1
CDS CAA 90 bp CAGTATAGGATTCTTCATCTGAGCCTTGTGGGGACTGTAGAAGCTTaGGAAAGAGTCAGCAGAGTCCAAGGAATAGACCTTTATTTGTTT +
Preference number: 6 (lower is better)
Translates to: QYRILHLSLVGTVEA*ERVSRVQGIDLYLF
Trigger: AAACAAATAAAGGTCTATTCCTTGGACTCTGCTGACTCTTTCCAAAGCTTCTACAGTCCCCACAAGGCTCAGATGAAGAATCCTATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626416.2