RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000111450

Ensembl transcript IDs: ENST00000261653.10, ENST00000344271.5, ENST00000392373.7, ENST00000540889.1

Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGCTTTTCTaGAGGGCACCAGCACATTTAAACTCACAGAAGGCACTTGAGGGC +
Preference number: 1 (lower is better)
Translates to: WGREQAETELRPRLF*RAPAHLNSQKALEG
Trigger: GCCCTCAAGTGCCTTCTGTGAGTTTAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 90 bp GAAGGAAAGGTGGGACATCACGGGAGGCAGGTCCCCCTGTGGACATaGTTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCATGATCCT +
Preference number: 1 (lower is better)
Translates to: EGKVGHHGRQVPLWT*FHRGVESFCHQHDP
Trigger: AGGATCATGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACCTGCCTCCCGTGATGTCCCACCTTTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 90 bp AGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGTaGTCCAATGGACGCATCATGGATGAGGGAGATTCGGAATTGTGT +
Preference number: 1 (lower is better)
Translates to: RQNSPSNCHTVTTSE*SNGRIMDEGDSELC
Trigger: ACACAATTCCGAATCTCCCTCATCCATGATGCGTCCATTGGATCACTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 90 bp AAAAGAACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTaGCCACCAGCGAGTGATCCAATGGACGCATCATGGATGAGGGAG +
Preference number: 1 (lower is better)
Translates to: KRTVRGRIPLVTATQ*PPASDPMDASWMRE
Trigger: CTCCCTCATCCATGATGCGTCCATTGGATCACTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR GCA 90 bp ACCCACTGTGCTTACGGCGCTGTCACTGAACAAGACGTTCGGTTGTaGTTCTTCCGTGAACTCATACATTACAAGGTCAGCACTCGATGC +
Preference number: 1 (lower is better)
Translates to: THCAYGAVTEQDVRL*FFRELIHYKVSTRC
Trigger: GCATCGAGTGCTGACCTTGTAATGTATGAGTTCACGGAAGAAGCACAACCGAACGTCTTGTTCAGTGACAGCGCCGTAAGCACAGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 90 bp CCGAGACAGCACCGAATGCTGGGTTCTTCGTATCCGAAGATCCACTaGAGTCCGGTTCCCACTCTCATCCTGATCAAAACTTTGTTCAAT +
Preference number: 1 (lower is better)
Translates to: PRQHRMLGSSYPKIH*SPVPTLILIKTLFN
Trigger: ATTGAACAAAGTTTTGATCAGGATGAGAGTGGGAACCGGACTTCAGTGGATCTTCGGATACGAAGAACCCAGCATTCGGTGCTGTCTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
3UTR TCA 90 bp GCCGGGTTACAGCGTCTGAGATTCATTCACGAAATGACAGGATGCTaGTTTGGTTGCAGATGTGGTCTGAGTCTCAAGGATAAATGGCTC +
Preference number: 1 (lower is better)
Translates to: AGLQRLRFIHEMTGC*FGCRCGLSLKDKWL
Trigger: GAGCCATTTATCCTTGAGACTCAGACCACATCTGCAACCAAATCAGCATCCTGTCATTTCGTGAATGAATCTCAGACGCTGTAACCCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 90 bp AAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCCAATGTTTTCCGTaGCAATGGGAAACTTTAAACAACTGTACAAAGGTGGCTCCAACA +
Preference number: 1 (lower is better)
Translates to: KALEGFEGLCSQCFP*QWETLNNCTKVAPT
Trigger: TGTTGGAGCCACCTTTGTACAGTTGTTTAAAGTTTCCCATTGTCACGGAAAACATTGGCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR GCA 90 bp TTGTGCTTCTTCCGTGAACTCATACATTACAAGGTCAGCACTCGATaGCGGGTTACAGCGTCTGAGATTCATTCACGAAATGACAGGATG +
Preference number: 1 (lower is better)
Translates to: LCFFRELIHYKVSTR*RVTASEIHSRNDRM
Trigger: CATCCTGTCATTTCGTGAATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTTGTAATGTATGAGTTCACGGAAGAAGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR GCA 90 bp AACTCGAATCTCCTATTTAGTGAAAAGAGACCACGGTCTTTACAGTaGAGTAACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACG +
Preference number: 1 (lower is better)
Translates to: NSNLLFSEKRPRSLQ*SNHSLSWGREQAET
Trigger: CGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTTCACTAAATAGGAGATTCGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 90 bp AGTTCACGACATTTGGGGCATCCTGCATGCACTCCTTTAACATTCTaGCTAGTGACTCTCTTAACAGATGTCCGCTCACCAGTTCATACA +
Preference number: 1 (lower is better)
Translates to: SSRHLGHPACTPLTF*LVTLLTDVRSPVHT
Trigger: TGTATGAACTGGTGAGCGGACATCTGTTAAGAGAGTCACTAGTCAGAATGTTAAAGGAGTGCATGCAGGATGCCCCAAATGTCGTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 90 bp CTTCGTATCCGAAGATCCACTGAAGTCCGGTTCCCACTCTCATCCTaGTCAAAACTTTGTTCAATAGTGATGAAATCTCAGATGCCTGGG +
Preference number: 1 (lower is better)
Translates to: LRIRRSTEVRFPLSS*SKLCSIVMKSQMPG
Trigger: CCCAGGCATCTGAGATTTCATCACTATTGAACAAAGTTTTGATCAGGATGAGAGTGGGAACCGGACTTCAGTGGATCTTCGGATACGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
3UTR CCA 90 bp CTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATGTAAACTaGGAAACTCGAATCTCCTATTTAGTGAAAAGAGACCACGGTCTT +
Preference number: 1 (lower is better)
Translates to: LSFITVLNSDFIHVN*ETRISYLVKRDHGL
Trigger: AAGACCGTGGTCTCTTTTCACTAAATAGGAGATTCGAGTTTCCCAGTTTACATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 90 bp CAATGGGAAACTTTAAACAACTGTACAAAGGTGGCTCCAACACCATaGAGCTTCCTATTTCACTCAAAAGGCCACATTCAGTATATAAAA +
Preference number: 1 (lower is better)
Translates to: QWETLNNCTKVAPTP*SFLFHSKGHIQYIK
Trigger: TTTTATATACTGAATGTGGCCTTTTGAGTGAAATAGGAAGCTTCATGGTGTTGGAGCCACCTTTGTACAGTTGTTTAAAGTTTCCCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp GGTCCCCCTGTGGACATGATTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCAGTCCCCCTGTGGACATaGTTCCACAGAGGCGTGGAG +
Preference number: 2 (lower is better)
Translates to: GPPVDMIPQRRGVLLPPAVPLWT*FHRGVE
Trigger: CTCCACGCCTCTGTGGAATCATGTCCACAGGGGGAC...TGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp TTGAAGGAAAGGTGGGACATCACGGGAGGCAGGTCCCCCTGTGGACATGATTCCAGGCCGAGGTTGCAGTaGGCTGAGATCGCACCACTG +
Preference number: 2 (lower is better)
Translates to: LKERWDITGGRSPCGHDSRPRLQ*AEIAPL
Trigger: CAGTGGTGCGATCTCAGCTCACTGCAACCTCGGCCT...GGAATCATGTCCACAGGGGGACCTGCCTCCCGTGATGTCCCACCTTTCCTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp TCCTGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGTGGCTCCAACACCATaGAGCTTCCTATTTCACTCA +
Preference number: 2 (lower is better)
Translates to: SWGREQAETELRPRLFWRVAPTP*SFLFHS
Trigger: TGAGTGAAATAGGAAGCTTCATGGTGTTGGAGCCAC...CCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp GGTCCCCCTGTGGACATGATTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCAGTGACCACCAGCGAGTaGTCCAATGGACGCATCATG +
Preference number: 2 (lower is better)
Translates to: GPPVDMIPQRRGVLLPPAVTTSE*SNGRIM
Trigger: CATGATGCGTCCATTGGATCACTCGCTGGTGGTCAC...TGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR GCA 90 bp GGTCCCCCTGTGGACATGATTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCAAAGGTCAGCACTCGATaGCGGGTTACAGCGTCTGAG +
Preference number: 2 (lower is better)
Translates to: GPPVDMIPQRRGVLLPPAKVSTR*RVTASE
Trigger: CTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTT...TGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR GCA 90 bp AACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGCCGGGAGGCCGAGGTTaGAGTGAGCTGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: NSQRQNSPSNCHTVTTSEPGGRG*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAACCTCGGCCTCCCGG...CTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR CCA 90 bp GGTCCCCCTGTGGACATGATTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCAACCTTGAAGGAAAGGTaGGACATCACGGGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: GPPVDMIPQRRGVLLPPATLKER*DITGGR
Trigger: CCTGCCTCCCGTGATGTCCCACCTTTCCTTCAAGGT...TGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp AACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGTTACGGCGCTGTCACTaGACAAGACGTTCGGTTGTG +
Preference number: 2 (lower is better)
Translates to: NHSLSWGREQAETELRPRLRRCH*TRRSVV
Trigger: CACAACCGAACGTCTTGTTCAGTGACAGCGCCGTAA...CCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp TTGAAGGAAAGGTGGGACATCACGGGAGGCAGGTCCCCCTGTGGACATGATTCCGTGACCACCAGCGAGTaGTCCAATGGACGCATCATG +
Preference number: 2 (lower is better)
Translates to: LKERWDITGGRSPCGHDSVTTSE*SNGRIM
Trigger: CATGATGCGTCCATTGGATCACTCGCTGGTGGTCAC...GGAATCATGTCCACAGGGGGACCTGCCTCCCGTGATGTCCCACCTTTCCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp GCTCCGCTCCCGAAACAGAGTCTGTGCCTCATTGTACTCCGCCATGGCTTCCACTATCCGAAGATCCACTaGAGTCCGGTTCCCACTCTC +
Preference number: 2 (lower is better)
Translates to: APLPKQSLCLIVLRHGFHYPKIH*SPVPTL
Trigger: GAGAGTGGGAACCGGACTTCAGTGGATCTTCGGATA...GTGGAAGCCATGGCGGAGTACAATGAGGCACAGACTCTGTTTCGGGAGCGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344271.5
3UTR-3UTR TCA 90 bp AACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGACAAGGTCAGGAGTTTaGGGCCAGCCTGGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: NSQRQNSPSNCHTVTTSETRSGV*GQPGQH
Trigger: ATGCTGGCCAGGCTGGCCTCAAACTCCTGACCTTGT...CTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp TACAGTGCAGTAACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCACAAGGTCAGGAGTTTaGGGCCAGCCTGGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: YSAVTIHYPGGGNRRKRSTRSGV*GQPGQH
Trigger: ATGCTGGCCAGGCTGGCCTCAAACTCCTGACCTTGT...GCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTTACTGCACTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp AGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGCACCAGCAGTTGTGCTTCTTCCGTaGACTCATACATTACAAGGT +
Preference number: 2 (lower is better)
Translates to: REQAETELRPRLFWRAPAVVLLP*THTLQG
Trigger: ACCTTGTAATGTATGAGTTCACGGAAGAAGCACAAC...TGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR CCA 90 bp TTGAAGGAAAGGTGGGACATCACGGGAGGCAGGTCCCCCTGTGGACATGATTCCAACCATTCATTATCCTaGGGGAGGGAACAGGCGGAA +
Preference number: 2 (lower is better)
Translates to: LKERWDITGGRSPCGHDSNHSLS*GREQAE
Trigger: TTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTT...GGAATCATGTCCACAGGGGGACCTGCCTCCCGTGATGTCCCACCTTTCCTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR CCA 90 bp GGTCCCCCTGTGGACATGATTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCACCAATGGACGCATCATaGATGAGGGAGATTCGGAAT +
Preference number: 2 (lower is better)
Translates to: GPPVDMIPQRRGVLLPPAPMDAS*MREIRN
Trigger: ATTCCGAATCTCCCTCATCCATGATGCGTCCATTGG...TGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp AACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGTTACGGCGCTGTCACTaGACAAGACGTTCGGTTGTG +
Preference number: 2 (lower is better)
Translates to: NSQRQNSPSNCHTVTTSELRRCH*TRRSVV
Trigger: CACAACCGAACGTCTTGTTCAGTGACAGCGCCGTAA...CTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp GCGGCTTCTGAGCCATTCAATATTCTCCACACCTGTTTGGAATCAGGCATCTCTAGGCGGAAACGGAGCTaGGGCCGAGGCTTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: AASEPFNILHTCLESGISRRKRS*GRGFSG
Trigger: TCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCT...AGAGATGCCTGATTCCAAACAGGTGTGGAGAATATTGAATGGCTCAGAAGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR CCA 90 bp AACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGACAACTGTACAAAGGTaGCTCCAACACCATGAAGCT +
Preference number: 2 (lower is better)
Translates to: NHSLSWGREQAETELRPRTTVQR*LQHHEA
Trigger: AGCTTCATGGTGTTGGAGCCACCTTTGTACAGTTGT...CCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR CCA 90 bp AACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGAGGCCGAGGCTTTTCTaGAGGGCACCAGCACATTTA +
Preference number: 2 (lower is better)
Translates to: NSQRQNSPSNCHTVTTSERPRLF*RAPAHL
Trigger: TAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCT...CTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR GCA 90 bp GGTCCCCCTGTGGACATGATTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCACCACGGTCTTTACAGTaGAGTAACCATTCATTATCC +
Preference number: 2 (lower is better)
Translates to: GPPVDMIPQRRGVLLPPAPRSLQ*SNHSLS
Trigger: GGATAATGAATGGTTACTGCACTGTAAAGACCGTGG...TGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR CCA 90 bp TTGAAGGAAAGGTGGGACATCACGGGAGGCAGGTCCCCCTGTGGACATGATTCCACAACTGTACAAAGGTaGCTCCAACACCATGAAGCT +
Preference number: 2 (lower is better)
Translates to: LKERWDITGGRSPCGHDSTTVQR*LQHHEA
Trigger: AGCTTCATGGTGTTGGAGCCACCTTTGTACAGTTGT...GGAATCATGTCCACAGGGGGACCTGCCTCCCGTGATGTCCCACCTTTCCTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR CCA 90 bp AACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGAGAGTTCACGACATTTaGGGCATCCTGCATGCACTC +
Preference number: 2 (lower is better)
Translates to: NSQRQNSPSNCHTVTTSERVHDI*GILHAL
Trigger: GAGTGCATGCAGGATGCCCCAAATGTCGTGAACTCT...CTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR CAA 90 bp CACACCCACTGTGCTTACGGCGCTGTCACTGAACAAGACGTTCGGTaGTGCTTCTTCCGTGAACTCATACATTACAAGGTCAGCACTCGA +
Preference number: 2 (lower is better)
Translates to: HTHCAYGAVTEQDVR*CFFRELIHYKVSTR
Trigger: TCGAGTGCTGACCTTGTAATGTATGAGTTCACGGAAGAAGCACAACCGAACGTCTTGTTCAGTGACAGCGCCGTAAGCACAGTGGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp AACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGGATTCATTCACGAAATaGCAGGATGCTGATTTGGTT +
Preference number: 2 (lower is better)
Translates to: NHSLSWGREQAETELRPRDSFTK*QDADLV
Trigger: AACCAAATCAGCATCCTGTCATTTCGTGAATGAATC...CCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp CCAGCACATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCGTTGCAGATGTGGTCTaGGTCTCAAGGATAAATGGC +
Preference number: 2 (lower is better)
Translates to: PAHLNSQKALEGFEGLCSVADVV*VSRING
Trigger: GCCATTTATCCTTGAGACTCAGACCACATCTGCAAC...GCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATGTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp GAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGCACCAGCACATTTAAACTCAGAAATGACAGGATGCTaGTTTGGTTGCAGATGTGGT +
Preference number: 2 (lower is better)
Translates to: ETELRPRLFWRAPAHLNSEMTGC*FGCRCG
Trigger: ACCACATCTGCAACCAAATCAGCATCCTGTCATTTC...TGAGTTTAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp GGAAACTCGAATCTCCTATTTAGTGAAAAGAGACCACGGTCTTTACAGTGCAGTAGGCGGAAACGGAGCTaGGGCCGAGGCTTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: GNSNLLFSEKRPRSLQCSRRKRS*GRGFSG
Trigger: TCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCT...ACTGCACTGTAAAGACCGTGGTCTCTTTTCACTAAATAGGAGATTCGAGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp TGCGGCCTTTGCTCCGCTCCCGAAACAGAGTCTGTGCCTCATTGTACTCCGCCATTCCCACTCTCATCCTaGTCAAAACTTTGTTCAATA +
Preference number: 2 (lower is better)
Translates to: CGLCSAPETESVPHCTPPFPLSS*SKLCSI
Trigger: TATTGAACAAAGTTTTGATCAGGATGAGAGTGGGAA...TGGCGGAGTACAATGAGGCACAGACTCTGTTTCGGGAGCGGAGCAAAGGCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
3UTR-3UTR GCA 90 bp TACAGTGCAGTAACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCCAAGACGTTCGGTTGTaGTTCTTCCGTGAACTCATA +
Preference number: 2 (lower is better)
Translates to: YSAVTIHYPGGGNRRKRSQDVRL*FFRELI
Trigger: TATGAGTTCACGGAAGAAGCACAACCGAACGTCTTG...GCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTTACTGCACTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR GCA 90 bp GCGGCTTCTGAGCCATTCAATATTCTCCACACCTGTTTGGAATCAGGCATCTCTCCTGGCAGAGAGGCATaGACACTGACGTTATCCACA +
Preference number: 2 (lower is better)
Translates to: AASEPFNILHTCLESGISPGREA*TLTLST
Trigger: TGTGGATAACGTCAGTGTGCATGCCTCTCTGCCAGG...AGAGATGCCTGATTCCAAACAGGTGTGGAGAATATTGAATGGCTCAGAAGCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392373.7
3UTR-3UTR CCA 90 bp AGGGAGGGAAAGGAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCTCAATTTTCCCACCCTaGCAGAGAGGCATGCACACT +
Preference number: 2 (lower is better)
Translates to: REGKEALDLRSKSFRTACSIFPP*QRGMHT
Trigger: AGTGTGCATGCCTCTCTGCCAGGGTGGGAAAATTGA...GCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTCCTTTCCCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392373.7
3UTR-3UTR GCA 90 bp GGAAAGGAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCCCGGTGCAAGACGTTCGGTTGTaGTTCTTCCGTGAACTCATA +
Preference number: 2 (lower is better)
Translates to: GKEALDLRSKSFRTACPVQDVRL*FFRELI
Trigger: TATGAGTTCACGGAAGAAGCACAACCGAACGTCTTG...CACCGGGCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTCCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR GCA 90 bp GAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGCACCAGCACATTTAAACTCAAGAGAAGTCTCACACTaGTCACATTCTGTAGTGTGT +
Preference number: 2 (lower is better)
Translates to: ETELRPRLFWRAPAHLNSREVSH*SHSVVC
Trigger: ACACACTACAGAATGTGAGCAGTGTGAGACTTCTCT...TGAGTTTAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR CCA 90 bp AGTGAAAAGAGACCACGGTCTTTACAGTGCAGTAACCATTCATTATCCTGGGGGAGGCCGAGGCTTTTCTaGAGGGCACCAGCACATTTA +
Preference number: 2 (lower is better)
Translates to: SEKRPRSLQCSNHSLSWGRPRLF*RAPAHL
Trigger: TAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCT...CCCCCAGGATAATGAATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp AAAAGAGACCACGGTCTTTACAGTGCAGTAACCATTCATTATCCTGGGGGAGGGGTTGCAGATGTGGTCTaGGTCTCAAGGATAAATGGC +
Preference number: 2 (lower is better)
Translates to: KRDHGLYSAVTIHYPGGGVADVV*VSRING
Trigger: GCCATTTATCCTTGAGACTCAGACCACATCTGCAAC...CCCTCCCCCAGGATAATGAATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp AAGGTCAGCACTCGATGCCGGGTTACAGCGTCTGAGATTCATTCACGAAATGACGAAATGACAGGATGCTaGTTTGGTTGCAGATGTGGT +
Preference number: 2 (lower is better)
Translates to: KVSTRCRVTASEIHSRNDEMTGC*FGCRCG
Trigger: ACCACATCTGCAACCAAATCAGCATCCTGTCATTTC...GTCATTTCGTGAATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp CCAGCACATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCGTTGTGCTTCTTCCGTaGACTCATACATTACAAGGT +
Preference number: 2 (lower is better)
Translates to: PAHLNSQKALEGFEGLCSVVLLP*THTLQG
Trigger: ACCTTGTAATGTATGAGTTCACGGAAGAAGCACAAC...GCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATGTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp CTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATGTAAACTGGGAAACTAGGCCGAGGTTGCAGTaGGCTGAGATCGCACCACTG +
Preference number: 2 (lower is better)
Translates to: LSFITVLNSDFIHVNWETRPRLQ*AEIAPL
Trigger: CAGTGGTGCGATCTCAGCTCACTGCAACCTCGGCCT...AGTTTCCCAGTTTACATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp CCGAGAGTACTGAACCTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATGAGTCCCGAGAGTACTaGACCTCAGTTTCATCACCG +
Preference number: 2 (lower is better)
Translates to: PRVLNLSFITVLNSDFIHESREY*TSVSSP
Trigger: CGGTGATGAAACTGAGGTTCAGTACTCTCGGGACTC...ATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAGGTTCAGTACTCTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR TCA 90 bp GCGGCTTCTGAGCCATTCAATATTCTCCACACCTGTTTGGAATCAGGCATCTCTAGCCAATGTTTTCCGTaGCAATGGGAAACTTTAAAC +
Preference number: 2 (lower is better)
Translates to: AASEPFNILHTCLESGISSQCFP*QWETLN
Trigger: GTTTAAAGTTTCCCATTGTCACGGAAAACATTGGCT...AGAGATGCCTGATTCCAAACAGGTGTGGAGAATATTGAATGGCTCAGAAGCCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR GCA 90 bp CTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATGTAAACTGGGAAACTAAGGTCAGCACTCGATaGCGGGTTACAGCGTCTGAG +
Preference number: 2 (lower is better)
Translates to: LSFITVLNSDFIHVNWETKVSTR*RVTASE
Trigger: CTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTT...AGTTTCCCAGTTTACATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR CCA 90 bp TACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTCCTTTAATGGCTCTTGGGATATaGTTGCTAGGACAATGTTGT +
Preference number: 2 (lower is better)
Translates to: YRSNKSSRHLGHPACTPLMALGI*LLGQCC
Trigger: ACAACATTGTCCTAGCAACCATATCCCAAGAGCCAT...TAAAGGAGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392373.7
3UTR-3UTR CCA 90 bp TTCAAGGCCAGTGAGAGAAGTCTCACACTGCTCACATTCTGTAGTGTGTCATTCAGGATAAATGGCTCTTaGGATATGGTTGCTAGGACA +
Preference number: 2 (lower is better)
Translates to: FKASERSLTLLTFCSVSFRINGS*DMVART
Trigger: TGTCCTAGCAACCATATCCCAAGAGCCATTTATCCT...GAATGACACACTACAGAATGTGAGCAGTGTGAGACTTCTCTCACTGGCCTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392373.7
3UTR-3UTR CCA 90 bp ACTACATACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTAGTCTCAAGGATAAATaGCTCTTGGGATATGGTTGC +
Preference number: 2 (lower is better)
Translates to: TTYRSNKSSRHLGHPACTSLKDK*LLGYGC
Trigger: GCAACCATATCCCAAGAGCCATTTATCCTTGAGACT...AGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTATGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392373.7
3UTR-3UTR TCA 90 bp ACTACATACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTAGCCAATGTTTTCCGTaGCAATGGGAAACTTTAAAC +
Preference number: 2 (lower is better)
Translates to: TTYRSNKSSRHLGHPACTSQCFP*QWETLN
Trigger: GTTTAAAGTTTCCCATTGTCACGGAAAACATTGGCT...AGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTATGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 72 bp GTGGGACATCACGGGAGGCAGGTCCCCCTGTGGACATaGTTCCACAGAGGCGTGGAGTCCTTTTGCCACCAG +
Preference number: 3 (lower is better)
Translates to: VGHHGRQVPLWT*FHRGVESFCHQ
Trigger: CTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACCTGCCTCCCGTGATGTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 72 bp CATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCTaGGGCCGAGGCTTTTCTGGAGGGCACCAGCACATT +
Preference number: 3 (lower is better)
Translates to: HYPGGGNRRKRS*GRGFSGGHQHI
Trigger: AATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR CCA 72 bp CCACGGTCTTTACAGTGCAGTAACCATTCATTATCCTaGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCG +
Preference number: 3 (lower is better)
Translates to: PRSLQCSNHSLS*GREQAETELRP
Trigger: CGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTTACTGCACTGTAAAGACCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR CCA 72 bp GAACAGGCGGAAACGGAGCTGAGGCCGAGGCTTTTCTaGAGGGCACCAGCACATTTAAACTCACAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: EQAETELRPRLF*RAPAHLNSQKA
Trigger: TGCCTTCTGTGAGTTTAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 72 bp TCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGTaGTCCAATGGACGCATCATGGATGAGGGAGATTCG +
Preference number: 3 (lower is better)
Translates to: SPSNCHTVTTSE*SNGRIMDEGDS
Trigger: CGAATCTCCCTCATCCATGATGCGTCCATTGGATCACTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR CAA 90 bp AACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGACTCACAGAAGGCACTaGAGGGCTTTGAGGGGCTTT +
Preference number: 3 (lower is better)
Translates to: NSQRQNSPSNCHTVTTSETHRRH*RALRGF
Trigger: AAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGT...CTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 72 bp AGTGTTGTAAAAGGGGAGGACTCATATGACAGACCTTaGAGGAAAGGTGGGACATCACGGGAGGCAGGTCCC +
Preference number: 3 (lower is better)
Translates to: SVVKGEDSYDRP*RKGGTSREAGP
Trigger: GGGACCTGCCTCCCGTGATGTCCCACCTTTCCTTCAAGGTCTGTCATATGAGTCCTCCCCTTTTACAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR CAA 90 bp CCAGCACATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCGAACAAGACGTTCGGTaGTGCTTCTTCCGTGAACTC +
Preference number: 3 (lower is better)
Translates to: PAHLNSQKALEGFEGLCSEQDVR*CFFREL
Trigger: GAGTTCACGGAAGAAGCACAACCGAACGTCTTGTTC...GCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATGTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 72 bp GACCACCAGCGAGTGATCCAATGGACGCATCATGGATaGGGGAGATTCGGAATTGTGTTAAGTAAGGGACGC +
Preference number: 3 (lower is better)
Translates to: DHQRVIQWTHHG*GRFGIVLSKGR
Trigger: GCGTCCCTTACTTAACACAATTCCGAATCTCCCTCATCCATGATGCGTCCATTGGATCACTCGCTGGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 72 bp CACCGAATGCTGGGTTCTTCGTATCCGAAGATCCACTaGAGTCCGGTTCCCACTCTCATCCTGATCAAAACT +
Preference number: 3 (lower is better)
Translates to: HRMLGSSYPKIH*SPVPTLILIKT
Trigger: AGTTTTGATCAGGATGAGAGTGGGAACCGGACTTCAGTGGATCTTCGGATACGAAGAACCCAGCATTCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
3UTR GCA 72 bp GCTTACGGCGCTGTCACTGAACAAGACGTTCGGTTGTaGTTCTTCCGTGAACTCATACATTACAAGGTCAGC +
Preference number: 3 (lower is better)
Translates to: AYGAVTEQDVRL*FFRELIHYKVS
Trigger: GCTGACCTTGTAATGTATGAGTTCACGGAAGAAGCACAACCGAACGTCTTGTTCAGTGACAGCGCCGTAAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR CAA 90 bp AAGGTCAGCACTCGATGCCGGGTTACAGCGTCTGAGATTCATTCACGAAATGACAGGATGCTGATTTGGTaGCAGATGTGGTCTGAGTCT +
Preference number: 3 (lower is better)
Translates to: KVSTRCRVTASEIHSRNDRMLIW*QMWSES
Trigger: AGACTCAGACCACATCTGCAACCAAATCAGCATCCT...GTCATTTCGTGAATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR CAA 90 bp AAAAGAGACCACGGTCTTTACAGTGCAGTAACCATTCATTATCCTGGGGGAGGGGCTCTTGGGATATGGTaGCTAGGACAATGTTGTTGC +
Preference number: 3 (lower is better)
Translates to: KRDHGLYSAVTIHYPGGGALGIW*LGQCCC
Trigger: GCAACAACATTGTCCTAGCAACCATATCCCAAGAGC...CCCTCCCCCAGGATAATGAATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392373.7
3UTR-3UTR CAA 90 bp TCGAATCTCCTATTTAGTGAAAAGAGACCACGGTCTTTACAGTGCAGTAACCATAGGCACTTGAGGGCTTaGAGGGGCTTTGCAGCCAAT +
Preference number: 3 (lower is better)
Translates to: SNLLFSEKRPRSLQCSNHRHLRA*RGFAAN
Trigger: ATTGGCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCT...ATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTTCACTAAATAGGAGATTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 72 bp CAGCGTCTGAGATTCATTCACGAAATGACAGGATGCTaGTTTGGTTGCAGATGTGGTCTGAGTCTCAAGGAT +
Preference number: 3 (lower is better)
Translates to: QRLRFIHEMTGC*FGCRCGLSLKD
Trigger: ATCCTTGAGACTCAGACCACATCTGCAACCAAATCAGCATCCTGTCATTTCGTGAATGAATCTCAGACGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 72 bp GAGGGCTTTGAGGGGCTTTGCAGCCAATGTTTTCCGTaGCAATGGGAAACTTTAAACAACTGTACAAAGGTG +
Preference number: 3 (lower is better)
Translates to: EGFEGLCSQCFP*QWETLNNCTKV
Trigger: CACCTTTGTACAGTTGTTTAAAGTTTCCCATTGTCACGGAAAACATTGGCTGCAAAGCCCCTCAAAGCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR GCA 72 bp TTCCGTGAACTCATACATTACAAGGTCAGCACTCGATaGCGGGTTACAGCGTCTGAGATTCATTCACGAAAT +
Preference number: 3 (lower is better)
Translates to: FRELIHYKVSTR*RVTASEIHSRN
Trigger: ATTTCGTGAATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTTGTAATGTATGAGTTCACGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR GCA 72 bp CTCCTATTTAGTGAAAAGAGACCACGGTCTTTACAGTaGAGTAACCATTCATTATCCTGGGGGAGGGAACAG +
Preference number: 3 (lower is better)
Translates to: LLFSEKRPRSLQ*SNHSLSWGREQ
Trigger: CTGTTCCCTCCCCCAGGATAATGAATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTTCACTAAATAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 72 bp AGATTCGGAATTGTGTTAAGTAAGGGACGCGGCTTCTaGGCCATTCAATATTCTCCACACCTGTTTGGAATC +
Preference number: 3 (lower is better)
Translates to: RFGIVLSKGRGF*AIQYSPHLFGI
Trigger: GATTCCAAACAGGTGTGGAGAATATTGAATGGCTCAGAAGCCGCGTCCCTTACTTAACACAATTCCGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR-3UTR CAA 90 bp CCGAGAGTACTGAACCTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATAGGATGCTGATTTGGTaGCAGATGTGGTCTGAGTCT +
Preference number: 3 (lower is better)
Translates to: PRVLNLSFITVLNSDFIHRMLIW*QMWSES
Trigger: AGACTCAGACCACATCTGCAACCAAATCAGCATCCT...ATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAGGTTCAGTACTCTCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 72 bp AAGACAAGTGATACCTTCAACATAGCCACAAATCAGTaGGCACATCCCACGACAGGGTGTTTAAAGACCAAA +
Preference number: 3 (lower is better)
Translates to: KTSDTFNIATNQ*AHPTTGCLKTK
Trigger: TTTGGTCTTTAAACACCCTGTCGTGGGATGTGCTCACTGATTTGTGGCTATGTTGAAGGTATCACTTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR TCA 72 bp CGAAGATCCACTGAAGTCCGGTTCCCACTCTCATCCTaGTCAAAACTTTGTTCAATAGTGATGAAATCTCAG +
Preference number: 3 (lower is better)
Translates to: RRSTEVRFPLSS*SKLCSIVMKSQ
Trigger: CTGAGATTTCATCACTATTGAACAAAGTTTTGATCAGGATGAGAGTGGGAACCGGACTTCAGTGGATCTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
3UTR TCA 72 bp ACTTTAAACAACTGTACAAAGGTGGCTCCAACACCATaGAGCTTCCTATTTCACTCAAAAGGCCACATTCAG +
Preference number: 3 (lower is better)
Translates to: TLNNCTKVAPTP*SFLFHSKGHIQ
Trigger: CTGAATGTGGCCTTTTGAGTGAAATAGGAAGCTTCATGGTGTTGGAGCCACCTTTGTACAGTTGTTTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR CCA 72 bp ATCACCGTCTTAAATTCAGACTTCATTCATGTAAACTaGGAAACTCGAATCTCCTATTTAGTGAAAAGAGAC +
Preference number: 3 (lower is better)
Translates to: ITVLNSDFIHVN*ETRISYLVKRD
Trigger: GTCTCTTTTCACTAAATAGGAGATTCGAGTTTCCCAGTTTACATGAATGAAGTCTGAATTTAAGACGGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp TTGAAGGAAAGGTGGGACATCACGGGAGGCAGGTCCCCCTGTGGACATGATTCCACACGCCGTCAGGTCTaGCAGCCGGTCCCGCATCCC +
Preference number: 4 (lower is better)
Translates to: LKERWDITGGRSPCGHDSTRRQV*QPVPHP
Trigger: GGGATGCGGGACCGGCTGCCAGACCTGACGGCGTGT...GGAATCATGTCCACAGGGGGACCTGCCTCCCGTGATGTCCCACCTTTCCTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGGTCCCCCTGTGGACATaGTTCCACAGAGGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: NHSLSWGREQAETELRPRVPLWT*FHRGVE
Trigger: CTCCACGCCTCTGTGGAATCATGTCCACAGGGGGAC...CCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp AGGGAGGGAAAGGAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCAAGCCTGTCCCGAGCTaGCTCCGGCCGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: REGKEALDLRSKSFRTACKPVPS*LRPGLG
Trigger: CCCGAGGCCCGGCCGGAGGCAGCTCGGGACAGGCTT...GCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTCCTTTCCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp GAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGCACCAGCACATTTAAACTCACCAGCTGGCGCTGGATaGGGCCTTTGCTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: ETELRPRLFWRAPAHLNSPAGAG*GLCSAP
Trigger: GGGAGCGGAGCAAAGGCCGCATCCAGCGCCAGCTGG...TGAGTTTAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp TCCTGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGCTCGTCGTCTGTGGTaGTTCTCCCAGTTATCTCCA +
Preference number: 4 (lower is better)
Translates to: SWGREQAETELRPRLFWRARRLW*FSQLSP
Trigger: TGGAGATAACTGGGAGAACCACCACAGACGACGAGC...CCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp GGTCCCCCTGTGGACATGATTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCAACAAGGTCAGGAGTTTaGGGCCAGCCTGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GPPVDMIPQRRGVLLPPATRSGV*GQPGQH
Trigger: ATGCTGGCCAGGCTGGCCTCAAACTCCTGACCTTGT...TGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TCCTGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGAGGGGAGGACTCATATaGCAGACCTTGAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SWGREQAETELRPRLFWRRGGLI*QTLKER
Trigger: CCTTTCCTTCAAGGTCTGTCATATGAGTCCTCCCCT...CCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp GGGTTCTTCGTATCCGAAGATCCACTGAAGTCCGGTTCCCACTCTCATCCTGATCCAGCTGGCGCTGGATaGGGCCTTTGCTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: GFFVSEDPLKSGSHSHPDPAGAG*GLCSAP
Trigger: GGGAGCGGAGCAAAGGCCGCATCCAGCGCCAGCTGG...ATCAGGATGAGAGTGGGAACCGGACTTCAGTGGATCTTCGGATACGAAGAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR CCA 90 bp TCCTGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGACAGCACCGAATGCTaGGTTCTTCGTATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: SWGREQAETELRPRLFWRDSTEC*VLRIRR
Trigger: TCTTCGGATACGAAGAACCCAGCATTCGGTGCTGTC...CCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGGTGACCACCAGCGAGTaGTCCAATGGACGCATCATG +
Preference number: 4 (lower is better)
Translates to: NHSLSWGREQAETELRPRVTTSE*SNGRIM
Trigger: CATGATGCGTCCATTGGATCACTCGCTGGTGGTCAC...CCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp ACTACATACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTAAGCCTGTCCCGAGCTaGCTCCGGCCGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: TTYRSNKSSRHLGHPACTKPVPS*LRPGLG
Trigger: CCCGAGGCCCGGCCGGAGGCAGCTCGGGACAGGCTT...AGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTATGTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp TGCTGGGTTCTTCGTATCCGAAGATCCACTGAAGTCCGGTTCCCACTCTCATCCGGAGAACTGTGGAGCTaGGGGGTCGGCTTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: CWVLRIRRSTEVRFPLSSGELWS*GVGLWS
Trigger: CGACCACAAGCCGACCCCCCAGCTCCACAGTTCTCC...GGATGAGAGTGGGAACCGGACTTCAGTGGATCTTCGGATACGAAGAACCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR CCA 90 bp CCAGCATCTCTTCTAGCTCGTCGTCTGTGGTGGTTCTCCCAGTTATCTCCAGCTGCGGGTGGGAGCTCATaGAGAACTGTGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PASLLARRLWWFSQLSPAAGGSS*RTVELG
Trigger: CCCCAGCTCCACAGTTCTCCATGAGCTCCCACCCGC...AGCTGGAGATAACTGGGAGAACCACCACAGACGACGAGCTAGAAGAGATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR TCA 90 bp AGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGCACCAGCAGTTGCAGATGTGGTCTaGGTCTCAAGGATAAATGGC +
Preference number: 4 (lower is better)
Translates to: REQAETELRPRLFWRAPAVADVV*VSRING
Trigger: GCCATTTATCCTTGAGACTCAGACCACATCTGCAAC...TGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGCACCAGCAGTGGCTCCAACACCATaGAGCTTCCTATTTCACTCA +
Preference number: 4 (lower is better)
Translates to: REQAETELRPRLFWRAPAVAPTP*SFLFHS
Trigger: TGAGTGAAATAGGAAGCTTCATGGTGTTGGAGCCAC...TGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGGAGTCCCGAGAGTACTaGACCTCAGTTTCATCACCG +
Preference number: 4 (lower is better)
Translates to: NHSLSWGREQAETELRPRESREY*TSVSSP
Trigger: CGGTGATGAAACTGAGGTTCAGTACTCTCGGGACTC...CCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGGTCCCCCTGTGGACATaGTTCCACAGAGGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: NSQRQNSPSNCHTVTTSEVPLWT*FHRGVE
Trigger: CTCCACGCCTCTGTGGAATCATGTCCACAGGGGGAC...CTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp GCGGCTTCTGAGCCATTCAATATTCTCCACACCTGTTTGGAATCAGGCATCTCTCCAGCTGGCGCTGGATaGGGCCTTTGCTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: AASEPFNILHTCLESGISPAGAG*GLCSAP
Trigger: GGGAGCGGAGCAAAGGCCGCATCCAGCGCCAGCTGG...AGAGATGCCTGATTCCAAACAGGTGTGGAGAATATTGAATGGCTCAGAAGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp CCAGCACATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCAGGCCGAGGTTGCAGTaGGCTGAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: PAHLNSQKALEGFEGLCSRPRLQ*AEIAPL
Trigger: CAGTGGTGCGATCTCAGCTCACTGCAACCTCGGCCT...GCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp CCAGCACATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCGCTGGATGCGGCCTTTaGTCCGCTCCCGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: PAHLNSQKALEGFEGLCSAGCGL*SAPETE
Trigger: CTCTGTTTCGGGAGCGGAGCAAAGGCCGCATCCAGC...GCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp TGTCATTCAGGGTCACGCATCACACCCACTGTGCTTACGGCGCTGTCACTGAACAAGGTCAGCACTCGATaGCGGGTTACAGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: CHSGSRITPTVLTALSLNKVSTR*RVTASE
Trigger: CTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTT...GTTCAGTGACAGCGCCGTAAGCACAGTGGGTGTGATGCGTGACCCTGAATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp TCCTGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGAGAGAAGTCTCACACTaGTCACATTCTGTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SWGREQAETELRPRLFWRREVSH*SHSVVC
Trigger: ACACACTACAGAATGTGAGCAGTGTGAGACTTCTCT...CCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp GCTCCGCTCCCGAAACAGAGTCTGTGCCTCATTGTACTCCGCCATGGCTTCCACGTGGTCGCCTCTCTCTaGTTCTGCACACATCTGAAA +
Preference number: 4 (lower is better)
Translates to: APLPKQSLCLIVLRHGFHVVASL*FCTHLK
Trigger: TTTCAGATGTGTGCAGAAGCAGAGAGAGGCGACCAC...GTGGAAGCCATGGCGGAGTACAATGAGGCACAGACTCTGTTTCGGGAGCGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR CCA 90 bp AGTGAAAAGAGACCACGGTCTTTACAGTGCAGTAACCATTCATTATCCTGGGGGACACGCCGTCAGGTCTaGCAGCCGGTCCCGCATCCC +
Preference number: 4 (lower is better)
Translates to: SEKRPRSLQCSNHSLSWGTRRQV*QPVPHP
Trigger: GGGATGCGGGACCGGCTGCCAGACCTGACGGCGTGT...CCCCCAGGATAATGAATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp GGTCCCCCTGTGGACATGATTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCAAACCATTCATTATCCTaGGGGAGGGAACAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: GPPVDMIPQRRGVLLPPANHSLS*GREQAE
Trigger: TTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTT...TGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp GGTCCCCCTGTGGACATGATTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCAAGAGTTCACGACATTTaGGGCATCCTGCATGCACTC +
Preference number: 4 (lower is better)
Translates to: GPPVDMIPQRRGVLLPPARVHDI*GILHAL
Trigger: GAGTGCATGCAGGATGCCCCAAATGTCGTGAACTCT...TGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
3UTR CAA 72 bp CCTTTGCTCCGCTCCCGAAACAGAGTCTGTGCCTCATaGTACTCCGCCATGGCTTCCACAAACTTCCGAGAC +
Preference number: 4 (lower is better)
Translates to: PLLRSRNRVCAS*YSAMASTNFRD
Trigger: GTCTCGGAAGTTTGTGGAAGCCATGGCGGAGTACAATGAGGCACAGACTCTGTTTCGGGAGCGGAGCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR TCA 90 bp AACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGGTTGCAGATGTGGTCTaGGTCTCAAGGATAAATGGC +
Preference number: 4 (lower is better)
Translates to: NHSLSWGREQAETELRPRVADVV*VSRING
Trigger: GCCATTTATCCTTGAGACTCAGACCACATCTGCAAC...CCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp GCCTTTGCTCCGCTCCCGAAACAGAGTCTGTGCCTCATTGTACTCCGCCATGGCTCCTTCCGGGTTTGGTaGAGAAAGAATGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: AFAPLPKQSLCLIVLRHGSFRVW*RKNDAV
Trigger: CACAGCATCATTCTTTCTGCACCAAACCCGGAAGGA...GCCATGGCGGAGTACAATGAGGCACAGACTCTGTTTCGGGAGCGGAGCAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR GCA 90 bp TTGCTCCGCTCCCGAAACAGAGTCTGTGCCTCATTGTACTCCGCCATGGCTTCCCCGAAACAGAGTCTGTaGCTCATTGTACTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: LLRSRNRVCASLYSAMASPKQSL*LIVLRH
Trigger: ATGGCGGAGTACAATGAGGCACAGACTCTGTTTCGG...GGAAGCCATGGCGGAGTACAATGAGGCACAGACTCTGTTTCGGGAGCGGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR CCA 90 bp GAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGCACCAGCACATTTAAACTCAACCTTGAAGGAAAGGTaGGACATCACGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ETELRPRLFWRAPAHLNSTLKER*DITGGR
Trigger: CCTGCCTCCCGTGATGTCCCACCTTTCCTTCAAGGT...TGAGTTTAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp GCCTTTGCTCCGCTCCCGAAACAGAGTCTGTGCCTCATTGTACTCCGCCATGGCCTAATCTCCTCCACCTaGTGGAAGAAATCATCCATG +
Preference number: 4 (lower is better)
Translates to: AFAPLPKQSLCLIVLRHGLISST*WKKSSM
Trigger: CATGGATGATTTCTTCCATCAGGTGGAGGAGATTAG...GCCATGGCGGAGTACAATGAGGCACAGACTCTGTTTCGGGAGCGGAGCAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR TCA 90 bp ACCGAATGCTGGGTTCTTCGTATCCGAAGATCCACTGAAGTCCGGTTCCCACTCTATCCGAAGATCCACTaGAGTCCGGTTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: TECWVLRIRRSTEVRFPLYPKIH*SPVPTL
Trigger: GAGAGTGGGAACCGGACTTCAGTGGATCTTCGGATA...GAGTGGGAACCGGACTTCAGTGGATCTTCGGATACGAAGAACCCAGCATTCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR TCA 90 bp TGTCATTCAGGGTCACGCATCACACCCACTGTGCTTACGGCGCTGTCACTGAACTGGTCTCCAGCTTCATaGTGTCCTTGTGACGTGACT +
Preference number: 4 (lower is better)
Translates to: CHSGSRITPTVLTALSLNWSPAS*CPCDVT
Trigger: AGTCACGTCACAAGGACATCATGAAGCTGGAGACCA...GTTCAGTGACAGCGCCGTAAGCACAGTGGGTGTGATGCGTGACCCTGAATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp CCAGCACATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCGTAACTGCCACACAGTaGCCACCAGCGAGTGATCCA +
Preference number: 4 (lower is better)
Translates to: PAHLNSQKALEGFEGLCSVTATQ*PPASDP
Trigger: TGGATCACTCGCTGGTGGTCACTGTGTGGCAGTTAC...GCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp TTGAAGGAAAGGTGGGACATCACGGGAGGCAGGTCCCCCTGTGGACATGATTCCTCCTTCCGGGTTTGGTaGAGAAAGAATGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: LKERWDITGGRSPCGHDSSFRVW*RKNDAV
Trigger: CACAGCATCATTCTTTCTGCACCAAACCCGGAAGGA...GGAATCATGTCCACAGGGGGACCTGCCTCCCGTGATGTCCCACCTTTCCTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp GCGGCTTCTGAGCCATTCAATATTCTCCACACCTGTTTGGAATCAGGCATCTCTGCTGGATGCGGCCTTTaGTCCGCTCCCGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: AASEPFNILHTCLESGISAGCGL*SAPETE
Trigger: CTCTGTTTCGGGAGCGGAGCAAAGGCCGCATCCAGC...AGAGATGCCTGATTCCAAACAGGTGTGGAGAATATTGAATGGCTCAGAAGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp TACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTCCTTTACCGGGAGGCCGAGGTTaGAGTGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: YRSNKSSRHLGHPACTPLPGGRG*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAACCTCGGCCTCCCGG...TAAAGGAGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp AGTGAAAAGAGACCACGGTCTTTACAGTGCAGTAACCATTCATTATCCTGGGGGCCGGGAGGCCGAGGTTaGAGTGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: SEKRPRSLQCSNHSLSWGPGGRG*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAACCTCGGCCTCCCGG...CCCCCAGGATAATGAATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp ACCGAATGCTGGGTTCTTCGTATCCGAAGATCCACTGAAGTCCGGTTCCCACTCGCTCGTCGTCTGTGGTaGTTCTCCCAGTTATCTCCA +
Preference number: 4 (lower is better)
Translates to: TECWVLRIRRSTEVRFPLARRLW*FSQLSP
Trigger: TGGAGATAACTGGGAGAACCACCACAGACGACGAGC...GAGTGGGAACCGGACTTCAGTGGATCTTCGGATACGAAGAACCCAGCATTCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR CCA 90 bp CCAGCACATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCGATTCCACAGAGGCGTaGAGTCCTTTTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: PAHLNSQKALEGFEGLCSDSTEA*SPFATS
Trigger: GCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATC...GCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp GCTCCGCTCCCGAAACAGAGTCTGTGCCTCATTGTACTCCGCCATGGCTTCCACGAAATCTCAGATGCCTaGGATGGGCTTCAGAATAGT +
Preference number: 4 (lower is better)
Translates to: APLPKQSLCLIVLRHGFHEISDA*DGLQNS
Trigger: ACTATTCTGAAGCCCATCCCAGGCATCTGAGATTTC...GTGGAAGCCATGGCGGAGTACAATGAGGCACAGACTCTGTTTCGGGAGCGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR TCA 90 bp GAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCCCGGTGACTCACGAGTCCCGAGAGTACTaGACCTCAGTTTCATCACCG +
Preference number: 4 (lower is better)
Translates to: EALDLRSKSFRTACPVTHESREY*TSVSSP
Trigger: CGGTGATGAAACTGAGGTTCAGTACTCTCGGGACTC...GTGAGTCACCGGGCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGTGGACGCATCATGGATaGGGGAGATTCGGAATTGTG +
Preference number: 4 (lower is better)
Translates to: NSQRQNSPSNCHTVTTSEWTHHG*GRFGIV
Trigger: CACAATTCCGAATCTCCCTCATCCATGATGCGTCCA...CTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TACAGTGCAGTAACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCAGGGGAGGACTCATATaGCAGACCTTGAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: YSAVTIHYPGGGNRRKRSRGGLI*QTLKER
Trigger: CCTTTCCTTCAAGGTCTGTCATATGAGTCCTCCCCT...GCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTTACTGCACTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp TACAGTGCAGTAACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCAATTCCCCTAGTAACTaGCACACAGTGACCACCAGC +
Preference number: 4 (lower is better)
Translates to: YSAVTIHYPGGGNRRKRSNSPSN*HTVTTS
Trigger: GCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATT...GCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTTACTGCACTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp GGTCCCCCTGTGGACATGATTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCATTTTCCTTCCGGGTTTaGTGCAGAAAGAATGATGCT +
Preference number: 4 (lower is better)
Translates to: GPPVDMIPQRRGVLLPPAFSFRV*CRKNDA
Trigger: AGCATCATTCTTTCTGCACCAAACCCGGAAGGAAAA...TGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp GACAGCACCGAATGCTGGGTTCTTCGTATCCGAAGATCCACTGAAGTCCGGTTCGACAGCACCGAATGCTaGGTTCTTCGTATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: DSTECWVLRIRRSTEVRFDSTEC*VLRIRR
Trigger: TCTTCGGATACGAAGAACCCAGCATTCGGTGCTGTC...GAACCGGACTTCAGTGGATCTTCGGATACGAAGAACCCAGCATTCGGTGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR CCA 90 bp AACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGATGGCTCTTGGGATATaGTTGCTAGGACAATGTTGT +
Preference number: 4 (lower is better)
Translates to: NHSLSWGREQAETELRPRMALGI*LLGQCC
Trigger: ACAACATTGTCCTAGCAACCATATCCCAAGAGCCAT...CCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp GGAAAGGAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCCCGGTGAGGCCGAGGCTTTTCTaGAGGGCACCAGCACATTTA +
Preference number: 4 (lower is better)
Translates to: GKEALDLRSKSFRTACPVRPRLF*RAPAHL
Trigger: TAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCT...CACCGGGCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTCCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp GGTCCCCCTGTGGACATGATTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCAAGCCAATGTTTTCCGTaGCAATGGGAAACTTTAAAC +
Preference number: 4 (lower is better)
Translates to: GPPVDMIPQRRGVLLPPASQCFP*QWETLN
Trigger: GTTTAAAGTTTCCCATTGTCACGGAAAACATTGGCT...TGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp GGAAAGGAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCCCGGTGAAGGGACGCGGCTTCTaGGCCATTCAATATTCTCCA +
Preference number: 4 (lower is better)
Translates to: GKEALDLRSKSFRTACPVKGRGF*AIQYSP
Trigger: TGGAGAATATTGAATGGCTCAGAAGCCGCGTCCCTT...CACCGGGCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTCCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp GCGGCTTCTGAGCCATTCAATATTCTCCACACCTGTTTGGAATCAGGCATCTCTGTGACCACCAGCGAGTaGTCCAATGGACGCATCATG +
Preference number: 4 (lower is better)
Translates to: AASEPFNILHTCLESGISVTTSE*SNGRIM
Trigger: CATGATGCGTCCATTGGATCACTCGCTGGTGGTCAC...AGAGATGCCTGATTCCAAACAGGTGTGGAGAATATTGAATGGCTCAGAAGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp GCGGCTTCTGAGCCATTCAATATTCTCCACACCTGTTTGGAATCAGGCATCTCTGTAACTGCCACACAGTaGCCACCAGCGAGTGATCCA +
Preference number: 4 (lower is better)
Translates to: AASEPFNILHTCLESGISVTATQ*PPASDP
Trigger: TGGATCACTCGCTGGTGGTCACTGTGTGGCAGTTAC...AGAGATGCCTGATTCCAAACAGGTGTGGAGAATATTGAATGGCTCAGAAGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AGGGAGGGAAAGGAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCATAGCCACAAATCAGTaGGCACATCCCACGACAGGG +
Preference number: 4 (lower is better)
Translates to: REGKEALDLRSKSFRTACIATNQ*AHPTTG
Trigger: CCCTGTCGTGGGATGTGCTCACTGATTTGTGGCTAT...GCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTCCTTTCCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp GAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGCACCAGCACATTTAAACTCATCCATGAACATCTCATaGAACTCTCGGATGCTGGTC +
Preference number: 4 (lower is better)
Translates to: ETELRPRLFWRAPAHLNSSMNIS*NSRMLV
Trigger: GACCAGCATCCGAGAGTTGCATGAGATGTTCATGGA...TGAGTTTAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp AAAAGAGACCACGGTCTTTACAGTGCAGTAACCATTCATTATCCTGGGGGAGGGAAGGTCAGCACTCGATaGCGGGTTACAGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: KRDHGLYSAVTIHYPGGGKVSTR*RVTASE
Trigger: CTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTT...CCCTCCCCCAGGATAATGAATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp CCAGCACATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCAATTCCCCTAGTAACTaGCACACAGTGACCACCAGC +
Preference number: 4 (lower is better)
Translates to: PAHLNSQKALEGFEGLCSNSPSN*HTVTTS
Trigger: GCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATT...GCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATGTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp AGGGAGGGAAAGGAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCCCTGGCAGAGAGGCATaGACACTGACGTTATCCACA +
Preference number: 4 (lower is better)
Translates to: REGKEALDLRSKSFRTACPGREA*TLTLST
Trigger: TGTGGATAACGTCAGTGTGCATGCCTCTCTGCCAGG...GCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTCCTTTCCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392373.7
CDS-3UTR CCA 90 bp CCAGCACATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCGACAGCACCGAATGCTaGGTTCTTCGTATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: PAHLNSQKALEGFEGLCSDSTEC*VLRIRR
Trigger: TCTTCGGATACGAAGAACCCAGCATTCGGTGCTGTC...GCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATGTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp GGAAAGGAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCCCGGTGAGAGTTCACGACATTTaGGGCATCCTGCATGCACTC +
Preference number: 4 (lower is better)
Translates to: GKEALDLRSKSFRTACPVRVHDI*GILHAL
Trigger: GAGTGCATGCAGGATGCCCCAAATGTCGTGAACTCT...CACCGGGCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTCCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp AAAAGAGACCACGGTCTTTACAGTGCAGTAACCATTCATTATCCTGGGGGAGGGACCTTGAAGGAAAGGTaGGACATCACGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KRDHGLYSAVTIHYPGGGTLKER*DITGGR
Trigger: CCTGCCTCCCGTGATGTCCCACCTTTCCTTCAAGGT...CCCTCCCCCAGGATAATGAATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp CCAGCACATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCTCAATTTTCCCACCCTaGCAGAGAGGCATGCACACT +
Preference number: 4 (lower is better)
Translates to: PAHLNSQKALEGFEGLCSSIFPP*QRGMHT
Trigger: AGTGTGCATGCCTCTCTGCCAGGGTGGGAAAATTGA...GCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATGTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392373.7
CDS-3UTR TCA 90 bp AACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGCTAATCTCCTCCACCTaGTGGAAGAAATCATCCATG +
Preference number: 4 (lower is better)
Translates to: NSQRQNSPSNCHTVTTSELISST*WKKSSM
Trigger: CATGGATGATTTCTTCCATCAGGTGGAGGAGATTAG...CTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCTGAGGCCGAGGTTGGTGCAGAAAGAATaGTGCTGTGGTTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: NHSLSWGREQAETELRPRLVQKE*CCGFSL
Trigger: TAAAGAAAAACCACAGCATCATTCTTTCTGCACCAA...CCTCGGCCTCAGCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp CTCATACATTACAAGGTCAGCACTCGATGCCGGGTTACAGCGTCTGAGATTCATTATCCGAAGATCCACTaGAGTCCGGTTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: LIHYKVSTRCRVTASEIHYPKIH*SPVPTL
Trigger: GAGAGTGGGAACCGGACTTCAGTGGATCTTCGGATA...ATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTTGTAATGTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGGAAATGACAGGATGCTaGTTTGGTTGCAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: NSQRQNSPSNCHTVTTSEEMTGC*FGCRCG
Trigger: ACCACATCTGCAACCAAATCAGCATCCTGTCATTTC...CTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TTGAAGGAAAGGTGGGACATCACGGGAGGCAGGTCCCCCTGTGGACATGATTCCAGCCAATGTTTTCCGTaGCAATGGGAAACTTTAAAC +
Preference number: 4 (lower is better)
Translates to: LKERWDITGGRSPCGHDSSQCFP*QWETLN
Trigger: GTTTAAAGTTTCCCATTGTCACGGAAAACATTGGCT...GGAATCATGTCCACAGGGGGACCTGCCTCCCGTGATGTCCCACCTTTCCTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGTCATATGACAGACCTTaGAGGAAAGGTGGGACATCA +
Preference number: 4 (lower is better)
Translates to: NSQRQNSPSNCHTVTTSESYDRP*RKGGTS
Trigger: TGATGTCCCACCTTTCCTTCAAGGTCTGTCATATGA...CTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp GGGTTCTTCGTATCCGAAGATCCACTGAAGTCCGGTTCCCACTCTCATCCTGATGCTTCTGCACACATCTaGAACCCTTTAACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GFFVSEDPLKSGSHSHPDASAHI*NPLTWL
Trigger: GAGCCAAGTTAAAGGGTTTCAGATGTGTGCAGAAGC...ATCAGGATGAGAGTGGGAACCGGACTTCAGTGGATCTTCGGATACGAAGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR TCA 90 bp AACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGGGCAACCAGAACCACTaGCACAGCAATAATTATCCA +
Preference number: 4 (lower is better)
Translates to: NSQRQNSPSNCHTVTTSEGNQNH*HSNNYP
Trigger: TGGATAATTATTGCTGTGTCAGTGGTTCTGGTTGCC...CTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392373.7
CDS-3UTR TCA 90 bp AGGGAGGGAAAGGAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCGAGAGGCATGCACACTaGCGTTATCCACACCATCAT +
Preference number: 4 (lower is better)
Translates to: REGKEALDLRSKSFRTACERHAH*RYPHHH
Trigger: ATGATGGTGTGGATAACGTCAGTGTGCATGCCTCTC...GCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTCCTTTCCCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392373.7
CDS-3UTR GCA 90 bp GAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGCACCAGCACATTTAAACTCACAAGACGTTCGGTTGTaGTTCTTCCGTGAACTCATA +
Preference number: 4 (lower is better)
Translates to: ETELRPRLFWRAPAHLNSQDVRL*FFRELI
Trigger: TATGAGTTCACGGAAGAAGCACAACCGAACGTCTTG...TGAGTTTAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp TGTCATTCAGGGTCACGCATCACACCCACTGTGCTTACGGCGCTGTCACTGAACACATTTGGGGCATCCTaGATGCACTCCTTTAACATT +
Preference number: 4 (lower is better)
Translates to: CHSGSRITPTVLTALSLNTFGAS*MHSFNI
Trigger: AATGTTAAAGGAGTGCATGCAGGATGCCCCAAATGT...GTTCAGTGACAGCGCCGTAAGCACAGTGGGTGTGATGCGTGACCCTGAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp GCGGCTTCTGAGCCATTCAATATTCTCCACACCTGTTTGGAATCAGGCATCTCTGGCGTGGAGTCCTTTTaGCACCAGCATGATCCTGAA +
Preference number: 4 (lower is better)
Translates to: AASEPFNILHTCLESGISGVESF*HQHDPE
Trigger: TTCAGGATCATGCTGGTGGCAAAAGGACTCCACGCC...AGAGATGCCTGATTCCAAACAGGTGTGGAGAATATTGAATGGCTCAGAAGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp GAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGCACCAGCACATTTAAACTCAACAACTGTACAAAGGTaGCTCCAACACCATGAAGCT +
Preference number: 4 (lower is better)
Translates to: ETELRPRLFWRAPAHLNSTTVQR*LQHHEA
Trigger: AGCTTCATGGTGTTGGAGCCACCTTTGTACAGTTGT...TGAGTTTAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp TCATACATTACAAGGTCAGCACTCGATGCCGGGTTACAGCGTCTGAGATTCATTGATTCCACAGAGGCGTaGAGTCCTTTTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SYITRSALDAGLQRLRFIDSTEA*SPFATS
Trigger: GCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATC...AATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTTGTAATGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TTGAAGGAAAGGTGGGACATCACGGGAGGCAGGTCCCCCTGTGGACATGATTCCTTCCCACTCTCATCCTaGTCAAAACTTTGTTCAATA +
Preference number: 4 (lower is better)
Translates to: LKERWDITGGRSPCGHDSFPLSS*SKLCSI
Trigger: TATTGAACAAAGTTTTGATCAGGATGAGAGTGGGAA...GGAATCATGTCCACAGGGGGACCTGCCTCCCGTGATGTCCCACCTTTCCTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp GAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGCACCAGCACATTTAAACTCAGTTGTGCTTCTTCCGTaGACTCATACATTACAAGGT +
Preference number: 4 (lower is better)
Translates to: ETELRPRLFWRAPAHLNSVVLLP*THTLQG
Trigger: ACCTTGTAATGTATGAGTTCACGGAAGAAGCACAAC...TGAGTTTAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTCCTTTATTACGGCGCTGTCACTaGACAAGACGTTCGGTTGTG +
Preference number: 4 (lower is better)
Translates to: YRSNKSSRHLGHPACTPLLRRCH*TRRSVV
Trigger: CACAACCGAACGTCTTGTTCAGTGACAGCGCCGTAA...TAAAGGAGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp GGAAACTCGAATCTCCTATTTAGTGAAAAGAGACCACGGTCTTTACAGTGCAGTACAAGGTCAGGAGTTTaGGGCCAGCCTGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GNSNLLFSEKRPRSLQCSTRSGV*GQPGQH
Trigger: ATGCTGGCCAGGCTGGCCTCAAACTCCTGACCTTGT...ACTGCACTGTAAAGACCGTGGTCTCTTTTCACTAAATAGGAGATTCGAGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AGGGAGGGAAAGGAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCGTGGCTCCAACACCATaGAGCTTCCTATTTCACTCA +
Preference number: 4 (lower is better)
Translates to: REGKEALDLRSKSFRTACVAPTP*SFLFHS
Trigger: TGAGTGAAATAGGAAGCTTCATGGTGTTGGAGCCAC...GCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTCCTTTCCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TCGAATCTCCTATTTAGTGAAAAGAGACCACGGTCTTTACAGTGCAGTAACCATAGGCGGAAACGGAGCTaGGGCCGAGGCTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SNLLFSEKRPRSLQCSNHRRKRS*GRGFSG
Trigger: TCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCT...ATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTTCACTAAATAGGAGATTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp CTCATACATTACAAGGTCAGCACTCGATGCCGGGTTACAGCGTCTGAGATTCATAAGGGACGCGGCTTCTaGGCCATTCAATATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LIHYKVSTRCRVTASEIHKGRGF*AIQYSP
Trigger: TGGAGAATATTGAATGGCTCAGAAGCCGCGTCCCTT...ATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTTGTAATGTATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TCATACATTACAAGGTCAGCACTCGATGCCGGGTTACAGCGTCTGAGATTCATTATAGCCACAAATCAGTaGGCACATCCCACGACAGGG +
Preference number: 4 (lower is better)
Translates to: SYITRSALDAGLQRLRFIIATNQ*AHPTTG
Trigger: CCCTGTCGTGGGATGTGCTCACTGATTTGTGGCTAT...AATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTTGTAATGTATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp AGTCCGGTTCCCACTCTCATCCTGATCAAAACTTTGTTCAATAGTGATGAAATCGCTGGATGCGGCCTTTaGTCCGCTCCCGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: SPVPTLILIKTLFNSDEIAGCGL*SAPETE
Trigger: CTCTGTTTCGGGAGCGGAGCAAAGGCCGCATCCAGC...GATTTCATCACTATTGAACAAAGTTTTGATCAGGATGAGAGTGGGAACCGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR GCA 90 bp AACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGAGAGAAGTCTCACACTaGTCACATTCTGTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: NSQRQNSPSNCHTVTTSEREVSH*SHSVVC
Trigger: ACACACTACAGAATGTGAGCAGTGTGAGACTTCTCT...CTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp AACAGTCAGAGGCAGAATTCCCCTAGTAACTGCCACACAGTGACCACCAGCGAGCCACGGTCTTTACAGTaGAGTAACCATTCATTATCC +
Preference number: 4 (lower is better)
Translates to: NSQRQNSPSNCHTVTTSEPRSLQ*SNHSLS
Trigger: GGATAATGAATGGTTACTGCACTGTAAAGACCGTGG...CTCGCTGGTGGTCACTGTGTGGCAGTTACTAGGGGAATTCTGCCTCTGACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp AGTGAAAAGAGACCACGGTCTTTACAGTGCAGTAACCATTCATTATCCTGGGGGGGCGTGGAGTCCTTTTaGCACCAGCATGATCCTGAA +
Preference number: 4 (lower is better)
Translates to: SEKRPRSLQCSNHSLSWGGVESF*HQHDPE
Trigger: TTCAGGATCATGCTGGTGGCAAAAGGACTCCACGCC...CCCCCAGGATAATGAATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTTCACT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp GACAGCACCGAATGCTGGGTTCTTCGTATCCGAAGATCCACTGAAGTCCGGTTCTTTTCCTTCCGGGTTTaGTGCAGAAAGAATGATGCT +
Preference number: 4 (lower is better)
Translates to: DSTECWVLRIRRSTEVRFFSFRV*CRKNDA
Trigger: AGCATCATTCTTTCTGCACCAAACCCGGAAGGAAAA...GAACCGGACTTCAGTGGATCTTCGGATACGAAGAACCCAGCATTCGGTGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR CCA 90 bp ACTACATACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTGCTCGTCGTCTGTGGTaGTTCTCCCAGTTATCTCCA +
Preference number: 4 (lower is better)
Translates to: TTYRSNKSSRHLGHPACTARRLW*FSQLSP
Trigger: TGGAGATAACTGGGAGAACCACCACAGACGACGAGC...AGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTATGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp CTCATACATTACAAGGTCAGCACTCGATGCCGGGTTACAGCGTCTGAGATTCATAACCATTCATTATCCTaGGGGAGGGAACAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: LIHYKVSTRCRVTASEIHNHSLS*GREQAE
Trigger: TTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTT...ATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTTGTAATGTATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp ACTCTCATCCTGATCAAAACTTTGTTCAATAGTGATGAAATCTCAGATGCCTGGGGGAGCGGGTGCGGGTaGGAGCTCATGGAGAACTGT +
Preference number: 4 (lower is better)
Translates to: TLILIKTLFNSDEISDAWGSGCG*ELMENC
Trigger: ACAGTTCTCCATGAGCTCCCACCCGCACCCGCTCCC...CCAGGCATCTGAGATTTCATCACTATTGAACAAAGTTTTGATCAGGATGAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344271.5
3UTR CAA 72 bp TGTGCTTACGGCGCTGTCACTGAACAAGACGTTCGGTaGTGCTTCTTCCGTGAACTCATACATTACAAGGTC +
Preference number: 4 (lower is better)
Translates to: CAYGAVTEQDVR*CFFRELIHYKV
Trigger: GACCTTGTAATGTATGAGTTCACGGAAGAAGCACAACCGAACGTCTTGTTCAGTGACAGCGCCGTAAGCACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp CATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCCAATGTGATGTCCTTGTGACGTaGCTCGATTTCATTGAGAGC +
Preference number: 4 (lower is better)
Translates to: HLNSQKALEGFEGLCSQCDVLVT*LDFIES
Trigger: GCTCTCAATGAAATCGAGTCACGTCACAAGGACATC...ACATTGGCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp CTCATACATTACAAGGTCAGCACTCGATGCCGGGTTACAGCGTCTGAGATTCATGATGTCCTTGTGACGTaGCTCGATTTCATTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LIHYKVSTRCRVTASEIHDVLVT*LDFIES
Trigger: GCTCTCAATGAAATCGAGTCACGTCACAAGGACATC...ATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTTGTAATGTATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TTCAAGGCCAGTGAGAGAAGTCTCACACTGCTCACATTCTGTAGTGTGTCATTCTGGTCTCCAGCTTCATaGTGTCCTTGTGACGTGACT +
Preference number: 4 (lower is better)
Translates to: FKASERSLTLLTFCSVSFWSPAS*CPCDVT
Trigger: AGTCACGTCACAAGGACATCATGAAGCTGGAGACCA...GAATGACACACTACAGAATGTGAGCAGTGTGAGACTTCTCTCACTGGCCTTGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TACAGTGCAGTAACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCGATTCATTCACGAAATaGCAGGATGCTGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: YSAVTIHYPGGGNRRKRSDSFTK*QDADLV
Trigger: AACCAAATCAGCATCCTGTCATTTCGTGAATGAATC...GCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTTACTGCACTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TGTCATTCAGGGTCACGCATCACACCCACTGTGCTTACGGCGCTGTCACTGAACACTCCTTTAACATTCTaGCTAGTGACTCTCTTAACA +
Preference number: 4 (lower is better)
Translates to: CHSGSRITPTVLTALSLNTPLTF*LVTLLT
Trigger: TGTTAAGAGAGTCACTAGTCAGAATGTTAAAGGAGT...GTTCAGTGACAGCGCCGTAAGCACAGTGGGTGTGATGCGTGACCCTGAATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AAGGTCAGCACTCGATGCCGGGTTACAGCGTCTGAGATTCATTCACGAAATGACAACCCTCAAGACAAGTaGTACCTTCAACATAGCCAC +
Preference number: 4 (lower is better)
Translates to: KVSTRCRVTASEIHSRNDNPQDK*YLQHSH
Trigger: GTGGCTATGTTGAAGGTATCACTTGTCTTGAGGGTT...GTCATTTCGTGAATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TGTCATTCAGGGTCACGCATCACACCCACTGTGCTTACGGCGCTGTCACTGAACATGATCCTGAAATATTaGAAACCCTCAAGACAAGTG +
Preference number: 4 (lower is better)
Translates to: CHSGSRITPTVLTALSLNMILKY*KPSRQV
Trigger: CACTTGTCTTGAGGGTTTTCAATATTTCAGGATCAT...GTTCAGTGACAGCGCCGTAAGCACAGTGGGTGTGATGCGTGACCCTGAATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp AGTGAAAAGAGACCACGGTCTTTACAGTGCAGTAACCATTCATTATCCTGGGGGCCGAAACAGAGTCTGTaGCTCATTGTACTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: SEKRPRSLQCSNHSLSWGPKQSL*LIVLRH
Trigger: ATGGCGGAGTACAATGAGGCACAGACTCTGTTTCGG...CCCCCAGGATAATGAATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp CCAGCACATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCAGGATAAATGGCTCTTaGGATATGGTTGCTAGGACA +
Preference number: 4 (lower is better)
Translates to: PAHLNSQKALEGFEGLCSRINGS*DMVART
Trigger: TGTCCTAGCAACCATATCCCAAGAGCCATTTATCCT...GCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATGTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp CCAGCACATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCAGTCTCAAGGATAAATaGCTCTTGGGATATGGTTGC +
Preference number: 4 (lower is better)
Translates to: PAHLNSQKALEGFEGLCSSLKDK*LLGYGC
Trigger: GCAACCATATCCCAAGAGCCATTTATCCTTGAGACT...GCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATGTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp GAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCCCGGTGACTCACAGTCTCAAGGATAAATaGCTCTTGGGATATGGTTGC +
Preference number: 4 (lower is better)
Translates to: EALDLRSKSFRTACPVTHSLKDK*LLGYGC
Trigger: GCAACCATATCCCAAGAGCCATTTATCCTTGAGACT...GTGAGTCACCGGGCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp CCAGCATCTCTTCTAGCTCGTCGTCTGTGGTGGTTCTCCCAGTTATCTCCAGCTGGAAGAAATCATCCATaGAATGATCTTTCTCAACCA +
Preference number: 4 (lower is better)
Translates to: PASLLARRLWWFSQLSPAGRNHP*NDLSQP
Trigger: TGGTTGAGAAAGATCATTTCATGGATGATTTCTTCC...AGCTGGAGATAACTGGGAGAACCACCACAGACGACGAGCTAGAAGAGATGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR TCA 90 bp ACCGAATGCTGGGTTCTTCGTATCCGAAGATCCACTGAAGTCCGGTTCCCACTCTTGGTGCAGAAAGAATaGTGCTGTGGTTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: TECWVLRIRRSTEVRFPLLVQKE*CCGFSL
Trigger: TAAAGAAAAACCACAGCATCATTCTTTCTGCACCAA...GAGTGGGAACCGGACTTCAGTGGATCTTCGGATACGAAGAACCCAGCATTCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR TCA 90 bp AGGGAGGGAAAGGAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCTTCATGATGTCCTTGTaGCGTGACTCGATTTCATTG +
Preference number: 4 (lower is better)
Translates to: REGKEALDLRSKSFRTACFMMSL*RDSISL
Trigger: CAATGAAATCGAGTCACGTCACAAGGACATCATGAA...GCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTCCTTTCCCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AAGGTCAGCACTCGATGCCGGGTTACAGCGTCTGAGATTCATTCACGAAATGACTTCATGATGTCCTTGTaGCGTGACTCGATTTCATTG +
Preference number: 4 (lower is better)
Translates to: KVSTRCRVTASEIHSRNDFMMSL*RDSISL
Trigger: CAATGAAATCGAGTCACGTCACAAGGACATCATGAA...GTCATTTCGTGAATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp GCGGCTTCTGAGCCATTCAATATTCTCCACACCTGTTTGGAATCAGGCATCTCTGAAATGACAGGATGCTaGTTTGGTTGCAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: AASEPFNILHTCLESGISEMTGC*FGCRCG
Trigger: ACCACATCTGCAACCAAATCAGCATCCTGTCATTTC...AGAGATGCCTGATTCCAAACAGGTGTGGAGAATATTGAATGGCTCAGAAGCCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp CTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATGTAAACTGGGAAACTAGGCGGAAACGGAGCTaGGGCCGAGGCTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LSFITVLNSDFIHVNWETRRKRS*GRGFSG
Trigger: TCCAGAAAAGCCTCGGCCTCAGCTCCGTTTCCGCCT...AGTTTCCCAGTTTACATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp CATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCCAATGTAACCCTCAAGACAAGTaGTACCTTCAACATAGCCAC +
Preference number: 4 (lower is better)
Translates to: HLNSQKALEGFEGLCSQCNPQDK*YLQHSH
Trigger: GTGGCTATGTTGAAGGTATCACTTGTCTTGAGGGTT...ACATTGGCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp ACTACATACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTTCCATGAACATCTCATaGAACTCTCGGATGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TTYRSNKSSRHLGHPACTSMNIS*NSRMLV
Trigger: GACCAGCATCCGAGAGTTGCATGAGATGTTCATGGA...AGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTATGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp GTTCCCACTCTCATCCTGATCAAAACTTTGTTCAATAGTGATGAAATCTCAGATGGCTTCAGAATAGTCTaGGAGCGGGTGCGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VPTLILIKTLFNSDEISDGFRIV*ERVRVG
Trigger: TCCCACCCGCACCCGCTCCCAGACTATTCTGAAGCC...ATCTGAGATTTCATCACTATTGAACAAAGTTTTGATCAGGATGAGAGTGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR TCA 90 bp GGAAAGGAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCCCGGTGTTCCCACTCTCATCCTaGTCAAAACTTTGTTCAATA +
Preference number: 4 (lower is better)
Translates to: GKEALDLRSKSFRTACPVFPLSS*SKLCSI
Trigger: TATTGAACAAAGTTTTGATCAGGATGAGAGTGGGAA...CACCGGGCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTCCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TCGAATCTCCTATTTAGTGAAAAGAGACCACGGTCTTTACAGTGCAGTAACCATTATCCGAAGATCCACTaGAGTCCGGTTCCCACTCTC +
Preference number: 4 (lower is better)
Translates to: SNLLFSEKRPRSLQCSNHYPKIH*SPVPTL
Trigger: GAGAGTGGGAACCGGACTTCAGTGGATCTTCGGATA...ATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTTCACTAAATAGGAGATTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TTCAAGGCCAGTGAGAGAAGTCTCACACTGCTCACATTCTGTAGTGTGTCATTCTCATATGACAGACCTTaGAGGAAAGGTGGGACATCA +
Preference number: 4 (lower is better)
Translates to: FKASERSLTLLTFCSVSFSYDRP*RKGGTS
Trigger: TGATGTCCCACCTTTCCTTCAAGGTCTGTCATATGA...GAATGACACACTACAGAATGTGAGCAGTGTGAGACTTCTCTCACTGGCCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AAGGTCAGCACTCGATGCCGGGTTACAGCGTCTGAGATTCATTCACGAAATGACGACAAGGCAGGAAAGTaGATACTTTTATGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KVSTRCRVTASEIHSRNDDKAGK*ILLCFS
Trigger: AGAGAAGCATAAAAGTATTCACTTTCCTGCCTTGTC...GTCATTTCGTGAATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp GAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGCACCAGCACATTTAAACTCACATCAATTTCCTTCTTaGCTTGCTCTGATATTTGAT +
Preference number: 4 (lower is better)
Translates to: ETELRPRLFWRAPAHLNSHQFPS*LALIFD
Trigger: ATCAAATATCAGAGCAAGGCAAGAAGGAAATTGATG...TGAGTTTAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261653.10
CDS-3UTR GCA 90 bp GCGGCTTCTGAGCCATTCAATATTCTCCACACCTGTTTGGAATCAGGCATCTCTACATTTGGGGCATCCTaGATGCACTCCTTTAACATT +
Preference number: 4 (lower is better)
Translates to: AASEPFNILHTCLESGISTFGAS*MHSFNI
Trigger: AATGTTAAAGGAGTGCATGCAGGATGCCCCAAATGT...AGAGATGCCTGATTCCAAACAGGTGTGGAGAATATTGAATGGCTCAGAAGCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp GAAACGGAGCTGAGGCCGAGGCTTTTCTGGAGGGCACCAGCACATTTAAACTCAGTGTTAAAAGTCACATaGTTACACTACTACATACAG +
Preference number: 4 (lower is better)
Translates to: ETELRPRLFWRAPAHLNSVLKVT*LHYYIQ
Trigger: CTGTATGTAGTAGTGTAAGCATGTGACTTTTAACAC...TGAGTTTAAATGTGCTGGTGCCCTCCAGAAAAGCCTCGGCCTCAGCTCCGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp GCGGCTTCTGAGCCATTCAATATTCTCCACACCTGTTTGGAATCAGGCATCTCTTTTTCCTTCCGGGTTTaGTGCAGAAAGAATGATGCT +
Preference number: 4 (lower is better)
Translates to: AASEPFNILHTCLESGISFSFRV*CRKNDA
Trigger: AGCATCATTCTTTCTGCACCAAACCCGGAAGGAAAA...AGAGATGCCTGATTCCAAACAGGTGTGGAGAATATTGAATGGCTCAGAAGCCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp ACTACATACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTGTTGTGCTTCTTCCGTaGACTCATACATTACAAGGT +
Preference number: 4 (lower is better)
Translates to: TTYRSNKSSRHLGHPACTVVLLP*THTLQG
Trigger: ACCTTGTAATGTATGAGTTCACGGAAGAAGCACAAC...AGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTATGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AGGGAGGGAAAGGAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCACTCCTTTAACATTCTaGCTAGTGACTCTCTTAACA +
Preference number: 4 (lower is better)
Translates to: REGKEALDLRSKSFRTACTPLTF*LVTLLT
Trigger: TGTTAAGAGAGTCACTAGTCAGAATGTTAAAGGAGT...GCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTCCTTTCCCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp GGAAACTCGAATCTCCTATTTAGTGAAAAGAGACCACGGTCTTTACAGTGCAGTTCCTTCCGGGTTTGGTaGAGAAAGAATGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: GNSNLLFSEKRPRSLQCSSFRVW*RKNDAV
Trigger: CACAGCATCATTCTTTCTGCACCAAACCCGGAAGGA...ACTGCACTGTAAAGACCGTGGTCTCTTTTCACTAAATAGGAGATTCGAGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp TCGAATCTCCTATTTAGTGAAAAGAGACCACGGTCTTTACAGTGCAGTAACCATCCGAAACAGAGTCTGTaGCTCATTGTACTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: SNLLFSEKRPRSLQCSNHPKQSL*LIVLRH
Trigger: ATGGCGGAGTACAATGAGGCACAGACTCTGTTTCGG...ATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTTCACTAAATAGGAGATTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp CCGAGAGTACTGAACCTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATCTAGCTCGTCGTCTGTaGTGGTTCTCCCAGTTATCT +
Preference number: 4 (lower is better)
Translates to: PRVLNLSFITVLNSDFIHLARRL*WFSQLS
Trigger: AGATAACTGGGAGAACCACCACAGACGACGAGCTAG...ATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAGGTTCAGTACTCTCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp CCTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATGTAAACTGGGAAACTGGACGCATCATGGATaGGGGAGATTCGGAATTGTG +
Preference number: 4 (lower is better)
Translates to: PQFHHRLKFRLHSCKLGNWTHHG*GRFGIV
Trigger: CACAATTCCGAATCTCCCTCATCCATGATGCGTCCA...GTTTCCCAGTTTACATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp GGAAACTCGAATCTCCTATTTAGTGAAAAGAGACCACGGTCTTTACAGTGCAGTCAAGACGTTCGGTTGTaGTTCTTCCGTGAACTCATA +
Preference number: 4 (lower is better)
Translates to: GNSNLLFSEKRPRSLQCSQDVRL*FFRELI
Trigger: TATGAGTTCACGGAAGAAGCACAACCGAACGTCTTG...ACTGCACTGTAAAGACCGTGGTCTCTTTTCACTAAATAGGAGATTCGAGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp AGTCCGGTTCCCACTCTCATCCTGATCAAAACTTTGTTCAATAGTGATGAAATCGCCTCTCTCTGCTTCTaGACACATCTGAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: SPVPTLILIKTLFNSDEIASLCF*THLKPF
Trigger: AAAGGGTTTCAGATGTGTGCAGAAGCAGAGAGAGGC...GATTTCATCACTATTGAACAAAGTTTTGATCAGGATGAGAGTGGGAACCGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR CCA 90 bp ACTCTCATCCTGATCAAAACTTTGTTCAATAGTGATGAAATCTCAGATGCCTGGCTAGCTCGTCGTCTGTaGTGGTTCTCCCAGTTATCT +
Preference number: 4 (lower is better)
Translates to: TLILIKTLFNSDEISDAWLARRL*WFSQLS
Trigger: AGATAACTGGGAGAACCACCACAGACGACGAGCTAG...CCAGGCATCTGAGATTTCATCACTATTGAACAAAGTTTTGATCAGGATGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR CCA 90 bp CCTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATGTAAACTGGGAAACCTAGCTCGTCGTCTGTaGTGGTTCTCCCAGTTATCT +
Preference number: 4 (lower is better)
Translates to: PQFHHRLKFRLHSCKLGNLARRL*WFSQLS
Trigger: AGATAACTGGGAGAACCACCACAGACGACGAGCTAG...GTTTCCCAGTTTACATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TCATACATTACAAGGTCAGCACTCGATGCCGGGTTACAGCGTCTGAGATTCATTGGAAGAAATCATCCATaGAATGATCTTTCTCAACCA +
Preference number: 4 (lower is better)
Translates to: SYITRSALDAGLQRLRFIGRNHP*NDLSQP
Trigger: TGGTTGAGAAAGATCATTTCATGGATGATTTCTTCC...AATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTTGTAATGTATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp TACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTCCTTTATTCTTTCTATGTTGTTaGTCATTTCACCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: YRSNKSSRHLGHPACTPLFFLCC*SFHPES
Trigger: AGACTCAGGGTGAAATGATCAACAACATAGAAAGAA...TAAAGGAGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp ACTACATACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTATGATCCTGAAATATTaGAAACCCTCAAGACAAGTG +
Preference number: 4 (lower is better)
Translates to: TTYRSNKSSRHLGHPACTMILKY*KPSRQV
Trigger: CACTTGTCTTGAGGGTTTTCAATATTTCAGGATCAT...AGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTATGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp GGAAACTCGAATCTCCTATTTAGTGAAAAGAGACCACGGTCTTTACAGTGCAGTGACAAGGCAGGAAAGTaGATACTTTTATGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GNSNLLFSEKRPRSLQCSDKAGK*ILLCFS
Trigger: AGAGAAGCATAAAAGTATTCACTTTCCTGCCTTGTC...ACTGCACTGTAAAGACCGTGGTCTCTTTTCACTAAATAGGAGATTCGAGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp TCGAATCTCCTATTTAGTGAAAAGAGACCACGGTCTTTACAGTGCAGTAACCATCCACGGTCTTTACAGTaGAGTAACCATTCATTATCC +
Preference number: 4 (lower is better)
Translates to: SNLLFSEKRPRSLQCSNHPRSLQ*SNHSLS
Trigger: GGATAATGAATGGTTACTGCACTGTAAAGACCGTGG...ATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTTCACTAAATAGGAGATTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR GCA 90 bp TACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTCCTTTAGTGTTAAAAGTCACATaGTTACACTACTACATACAG +
Preference number: 4 (lower is better)
Translates to: YRSNKSSRHLGHPACTPLVLKVT*LHYYIQ
Trigger: CTGTATGTAGTAGTGTAAGCATGTGACTTTTAACAC...TAAAGGAGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp TCGAATCTCCTATTTAGTGAAAAGAGACCACGGTCTTTACAGTGCAGTAACCATATGGCTCTTGGGATATaGTTGCTAGGACAATGTTGT +
Preference number: 4 (lower is better)
Translates to: SNLLFSEKRPRSLQCSNHMALGI*LLGQCC
Trigger: ACAACATTGTCCTAGCAACCATATCCCAAGAGCCAT...ATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTTCACTAAATAGGAGATTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CCA 90 bp CTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATGTAAACTGGGAAACTCCAATGGACGCATCATaGATGAGGGAGATTCGGAAT +
Preference number: 4 (lower is better)
Translates to: LSFITVLNSDFIHVNWETPMDAS*MREIRN
Trigger: ATTCCGAATCTCCCTCATCCATGATGCGTCCATTGG...AGTTTCCCAGTTTACATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp AGTCCGGTTCCCACTCTCATCCTGATCAAAACTTTGTTCAATAGTGATGAAATCTTCCCACTCTCATCCTaGTCAAAACTTTGTTCAATA +
Preference number: 4 (lower is better)
Translates to: SPVPTLILIKTLFNSDEIFPLSS*SKLCSI
Trigger: TATTGAACAAAGTTTTGATCAGGATGAGAGTGGGAA...GATTTCATCACTATTGAACAAAGTTTTGATCAGGATGAGAGTGGGAACCGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR TCA 90 bp CCGAGAGTACTGAACCTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATTTCTTTCTATGTTGTTaGTCATTTCACCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: PRVLNLSFITVLNSDFIHFFLCC*SFHPES
Trigger: AGACTCAGGGTGAAATGATCAACAACATAGAAAGAA...ATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAGGTTCAGTACTCTCGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp CCTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATGTAAACTGGGAAACTTGGTGCAGAAAGAATaGTGCTGTGGTTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: PQFHHRLKFRLHSCKLGNLVQKE*CCGFSL
Trigger: TAAAGAAAAACCACAGCATCATTCTTTCTGCACCAA...GTTTCCCAGTTTACATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp CTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATGTAAACTGGGAAACTGATTCATTCACGAAATaGCAGGATGCTGATTTGGTT +
Preference number: 4 (lower is better)
Translates to: LSFITVLNSDFIHVNWETDSFTK*QDADLV
Trigger: AACCAAATCAGCATCCTGTCATTTCGTGAATGAATC...AGTTTCCCAGTTTACATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR TCA 90 bp CTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATGTAAACTGGGAAACTGGAAGAAATCATCCATaGAATGATCTTTCTCAACCA +
Preference number: 4 (lower is better)
Translates to: LSFITVLNSDFIHVNWETGRNHP*NDLSQP
Trigger: TGGTTGAGAAAGATCATTTCATGGATGATTTCTTCC...AGTTTCCCAGTTTACATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp GGTCCCCCTGTGGACATGATTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCACGCTGGATGCGGCCTTaGCTCCGCTCCCGAAACAGA +
Preference number: 5 (lower is better)
Translates to: GPPVDMIPQRRGVLLPPARWMRP*LRSRNR
Trigger: TCTGTTTCGGGAGCGGAGCAAAGGCCGCATCCAGCG...TGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp GGTCCCCCTGTGGACATGATTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCAAGGCACTTGAGGGCTTaGAGGGGCTTTGCAGCCAAT +
Preference number: 5 (lower is better)
Translates to: GPPVDMIPQRRGVLLPPARHLRA*RGFAAN
Trigger: ATTGGCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCT...TGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp CCAGCACATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCCGCTGGATGCGGCCTTaGCTCCGCTCCCGAAACAGA +
Preference number: 5 (lower is better)
Translates to: PAHLNSQKALEGFEGLCSRWMRP*LRSRNR
Trigger: TCTGTTTCGGGAGCGGAGCAAAGGCCGCATCCAGCG...GCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp GGTCCCCCTGTGGACATGATTCCACAGAGGCGTGGAGTCCTTTTGCCACCAGCAAAGAGTTCACGACATTaGGGGCATCCTGCATGCACT +
Preference number: 5 (lower is better)
Translates to: GPPVDMIPQRRGVLLPPAKSSRH*GHPACT
Trigger: AGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTT...TGCTGGTGGCAAAAGGACTCCACGCCTCTGTGGAATCATGTCCACAGGGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp TTGAAGGAAAGGTGGGACATCACGGGAGGCAGGTCCCCCTGTGGACATGATTCCAGGATGCTGATTTGGTaGCAGATGTGGTCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: LKERWDITGGRSPCGHDSRMLIW*QMWSES
Trigger: AGACTCAGACCACATCTGCAACCAAATCAGCATCCT...GGAATCATGTCCACAGGGGGACCTGCCTCCCGTGATGTCCCACCTTTCCTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp TACAGTGCAGTAACCATTCATTATCCTGGGGGAGGGAACAGGCGGAAACGGAGCACTCACAGAAGGCACTaGAGGGCTTTGAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: YSAVTIHYPGGGNRRKRSTHRRH*RALRGF
Trigger: AAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGT...GCTCCGTTTCCGCCTGTTCCCTCCCCCAGGATAATGAATGGTTACTGCACTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp GGAAAGGAAGCCTTAGACCTGAGATCTAAAAGCTTCAGAACAGCCTGCCCGGTGACTCACAGAAGGCACTaGAGGGCTTTGAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: GKEALDLRSKSFRTACPVTHRRH*RALRGF
Trigger: AAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGT...CACCGGGCAGGCTGTTCTGAAGCTTTTAGATCTCAGGTCTAAGGCTTCCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp CATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCCAATGTAGAGTCTGTGCCTCATaGTACTCCGCCATGGCTTCC +
Preference number: 5 (lower is better)
Translates to: HLNSQKALEGFEGLCSQCRVCAS*YSAMAS
Trigger: GGAAGCCATGGCGGAGTACAATGAGGCACAGACTCT...ACATTGGCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp TGCGGCCTTTGCTCCGCTCCCGAAACAGAGTCTGTGCCTCATTGTACTCCGCCACTGAAACCCTTTAACTaGGCTCGAATTTTATTCGCA +
Preference number: 5 (lower is better)
Translates to: CGLCSAPETESVPHCTPPLKPFN*ARILFA
Trigger: TGCGAATAAAATTCGAGCCAAGTTAAAGGGTTTCAG...TGGCGGAGTACAATGAGGCACAGACTCTGTTTCGGGAGCGGAGCAAAGGCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR CAA 90 bp TTGAAGGAAAGGTGGGACATCACGGGAGGCAGGTCCCCCTGTGGACATGATTCCTATCCACACCATCATTaGCCAACTGACAAGCCAATA +
Preference number: 5 (lower is better)
Translates to: LKERWDITGGRSPCGHDSYPHHH*PTDKPI
Trigger: TATTGGCTTGTCAGTTGGCAAATGATGGTGTGGATA...GGAATCATGTCCACAGGGGGACCTGCCTCCCGTGATGTCCCACCTTTCCTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392373.7
CDS CCA 90 bp ATCCTGATCAAAACTTTGTTCAATAGTGATGAAATCTCAGATGCCTaGGATGGGCTTCAGAATAGTCTGGGAGCGGGTGCGGGTGGGAGC +
Preference number: 5 (lower is better)
Translates to: ILIKTLFNSDEISDA*DGLQNSLGAGAGGS
Trigger: GCTCCCACCCGCACCCGCTCCCAGACTATTCTGAAGCCCATCCCAGGCATCTGAGATTTCATCACTATTGAACAAAGTTTTGATCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR CAA 90 bp AGTGAAAAGAGACCACGGTCTTTACAGTGCAGTAACCATTCATTATCCTGGGGGAGAGTCTGTGCCTCATaGTACTCCGCCATGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SEKRPRSLQCSNHSLSWGRVCAS*YSAMAS
Trigger: GGAAGCCATGGCGGAGTACAATGAGGCACAGACTCT...CCCCCAGGATAATGAATGGTTACTGCACTGTAAAGACCGTGGTCTCTTTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp TACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTCCTTTAAGGCACTTGAGGGCTTaGAGGGGCTTTGCAGCCAAT +
Preference number: 5 (lower is better)
Translates to: YRSNKSSRHLGHPACTPLRHLRA*RGFAAN
Trigger: ATTGGCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCT...TAAAGGAGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp ACTCTCATCCTGATCAAAACTTTGTTCAATAGTGATGAAATCTCAGATGCCTGGCGCTGGATGCGGCCTTaGCTCCGCTCCCGAAACAGA +
Preference number: 5 (lower is better)
Translates to: TLILIKTLFNSDEISDAWRWMRP*LRSRNR
Trigger: TCTGTTTCGGGAGCGGAGCAAAGGCCGCATCCAGCG...CCAGGCATCTGAGATTTCATCACTATTGAACAAAGTTTTGATCAGGATGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR CAA 90 bp CATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCCAATGTGAACAAGACGTTCGGTaGTGCTTCTTCCGTGAACTC +
Preference number: 5 (lower is better)
Translates to: HLNSQKALEGFEGLCSQCEQDVR*CFFREL
Trigger: GAGTTCACGGAAGAAGCACAACCGAACGTCTTGTTC...ACATTGGCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp CTCATACATTACAAGGTCAGCACTCGATGCCGGGTTACAGCGTCTGAGATTCATGCTCTTGGGATATGGTaGCTAGGACAATGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: LIHYKVSTRCRVTASEIHALGIW*LGQCCC
Trigger: GCAACAACATTGTCCTAGCAACCATATCCCAAGAGC...ATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTTGTAATGTATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp CATTTAAACTCACAGAAGGCACTTGAGGGCTTTGAGGGGCTTTGCAGCCAATGTGCTCTTGGGATATGGTaGCTAGGACAATGTTGTTGC +
Preference number: 5 (lower is better)
Translates to: HLNSQKALEGFEGLCSQCALGIW*LGQCCC
Trigger: GCAACAACATTGTCCTAGCAACCATATCCCAAGAGC...ACATTGGCTGCAAAGCCCCTCAAAGCCCTCAAGTGCCTTCTGTGAGTTTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp TTCAAGGCCAGTGAGAGAAGTCTCACACTGCTCACATTCTGTAGTGTGTCATTCAAGAGTTCACGACATTaGGGGCATCCTGCATGCACT +
Preference number: 5 (lower is better)
Translates to: FKASERSLTLLTFCSVSFKSSRH*GHPACT
Trigger: AGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTT...GAATGACACACTACAGAATGTGAGCAGTGTGAGACTTCTCTCACTGGCCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp TACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTCCTTTAAGGATGCTGATTTGGTaGCAGATGTGGTCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: YRSNKSSRHLGHPACTPLRMLIW*QMWSES
Trigger: AGACTCAGACCACATCTGCAACCAAATCAGCATCCT...TAAAGGAGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp AAGGTCAGCACTCGATGCCGGGTTACAGCGTCTGAGATTCATTCACGAAATGACTCAATAGCCTTTAACTaGGCTCGAATTTTATTCGCA +
Preference number: 5 (lower is better)
Translates to: KVSTRCRVTASEIHSRNDSIAFN*ARILFA
Trigger: TGCGAATAAAATTCGAGCCAAGTTAAAGGCTATTGA...GTCATTTCGTGAATGAATCTCAGACGCTGTAACCCGGCATCGAGTGCTGACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp GTTCCCACTCTCATCCTGATCAAAACTTTGTTCAATAGTGATGAAATCTCAGATAGAGTCTGTGCCTCATaGTACTCCGCCATGGCTTCC +
Preference number: 5 (lower is better)
Translates to: VPTLILIKTLFNSDEISDRVCAS*YSAMAS
Trigger: GGAAGCCATGGCGGAGTACAATGAGGCACAGACTCT...ATCTGAGATTTCATCACTATTGAACAAAGTTTTGATCAGGATGAGAGTGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS-3UTR CAA 90 bp GCGGCTTCTGAGCCATTCAATATTCTCCACACCTGTTTGGAATCAGGCATCTCTCGTGACTCGATTTCATaGAGAGCTTGTCTAGTAATT +
Preference number: 5 (lower is better)
Translates to: AASEPFNILHTCLESGISRDSIS*RACLVI
Trigger: AATTACTAGACAAGCTCTCAATGAAATCGAGTCACG...AGAGATGCCTGATTCCAAACAGGTGTGGAGAATATTGAATGGCTCAGAAGCCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp CCGAGAGTACTGAACCTCAGTTTCATCACCGTCTTAAATTCAGACTTCATTCATGAACAAGACGTTCGGTaGTGCTTCTTCCGTGAACTC +
Preference number: 5 (lower is better)
Translates to: PRVLNLSFITVLNSDFIHEQDVR*CFFREL
Trigger: GAGTTCACGGAAGAAGCACAACCGAACGTCTTGTTC...ATGAATGAAGTCTGAATTTAAGACGGTGATGAAACTGAGGTTCAGTACTCTCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS TCA 90 bp ATAATGAACATCAATTTTCCCACCCTGGCAGAGAGGCATGCACACTaGCGTTATCCACACCATCATTTGCCAACTGACAAGCCAATAATT +
Preference number: 5 (lower is better)
Translates to: IMNINFPTLAERHAH*RYPHHHLPTDKPII
Trigger: AATTATTGGCTTGTCAGTTGGCAAATGATGGTGTGGATAACGTCAGTGTGCATGCCTCTCTGCCAGGGTGGGAAAATTGATGTTCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392373.7
CDS-3UTR CAA 90 bp TACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTCCTTTACGTGACTCGATTTCATaGAGAGCTTGTCTAGTAATT +
Preference number: 5 (lower is better)
Translates to: YRSNKSSRHLGHPACTPLRDSIS*RACLVI
Trigger: AATTACTAGACAAGCTCTCAATGAAATCGAGTCACG...TAAAGGAGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS TCA 90 bp CTTCGTATCCGAAGATCCACTGAAGTCCGGTTCCCACTCTCATCCTaGTCAAAACTTTGTTCAATAGCCTTTAACTTGGCTCGAATTTTA +
Preference number: 5 (lower is better)
Translates to: LRIRRSTEVRFPLSS*SKLCSIAFNLARIL
Trigger: TAAAATTCGAGCCAAGTTAAAGGCTATTGAACAAAGTTTTGATCAGGATGAGAGTGGGAACCGGACTTCAGTGGATCTTCGGATACGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS-3UTR CAA 90 bp ACTACATACAGGAGTAACAAGAGTTCACGACATTTGGGGCATCCTGCATGCACTTCAATAGCCTTTAACTaGGCTCGAATTTTATTCGCA +
Preference number: 5 (lower is better)
Translates to: TTYRSNKSSRHLGHPACTSIAFN*ARILFA
Trigger: TGCGAATAAAATTCGAGCCAAGTTAAAGGCTATTGA...AGTGCATGCAGGATGCCCCAAATGTCGTGAACTCTTGTTACTCCTGTATGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS TCA 90 bp CCTTTTAGGCAGGCTTACATCAATGTATTACAACTTGAAACCAAATaGAGAGAAAAACGCAGCTTAATTCTTCGAAGCCAAACTCACCCT +
Preference number: 5 (lower is better)
Translates to: PFRQAYINVLQLETK*REKRSLILRSQTHP
Trigger: AGGGTGAGTTTGGCTTCGAAGAATTAAGCTGCGTTTTTCTCTTCATTTGGTTTCAAGTTGTAATACATTGATGTAAGCCTGCCTAAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540889.1
CDS CCA 72 bp CGGGTGCGGGTGGGAGCTCATGGAGAACTGTGGAGCTaGGGGGTCGGCTTGTGGTCGCCTCTCTCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: RVRVGAHGELWS*GVGLWSPLSAS
Trigger: AGAAGCAGAGAGAGGCGACCACAAGCCGACCCCCCAGCTCCACAGTTCTCCATGAGCTCCCACCCGCACCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344271.5
CDS TCA 72 bp ATCAATTTTCCCACCCTGGCAGAGAGGCATGCACACTaGCGTTATCCACACCATCATTTGCCAACTGACAAG +
Preference number: 6 (lower is better)
Translates to: INFPTLAERHAH*RYPHHHLPTDK
Trigger: CTTGTCAGTTGGCAAATGATGGTGTGGATAACGTCAGTGTGCATGCCTCTCTGCCAGGGTGGGAAAATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392373.7
CDS TCA 72 bp CGAAGATCCACTGAAGTCCGGTTCCCACTCTCATCCTaGTCAAAACTTTGTTCAATAGCCTTTAACTTGGCT +
Preference number: 6 (lower is better)
Translates to: RRSTEVRFPLSS*SKLCSIAFNLA
Trigger: AGCCAAGTTAAAGGCTATTGAACAAAGTTTTGATCAGGATGAGAGTGGGAACCGGACTTCAGTGGATCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261653.10
ENST00000392373.7
CDS TCA 72 bp CAGGCTTACATCAATGTATTACAACTTGAAACCAAATaGAGAGAAAAACGCAGCTTAATTCTTCGAAGCCAA +
Preference number: 6 (lower is better)
Translates to: QAYINVLQLETK*REKRSLILRSQ
Trigger: TTGGCTTCGAAGAATTAAGCTGCGTTTTTCTCTTCATTTGGTTTCAAGTTGTAATACATTGATGTAAGCCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540889.1