RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STX1A (Homo sapiens)

Ensembl gene IDs: ENSG00000106089

Ensembl transcript IDs: ENST00000222812.8, ENST00000395154.7, ENST00000395155.3, ENST00000395156.7, ENST00000461441.5, ENST00000462135.1, ENST00000470878.5, ENST00000491427.5, ENST00000494245.1, ENST00000496216.5, ENST00000497980.5

Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGGGAGGGAGCCTGGAGCCATGGCAGCCTGAGCCTCCCTGGCAGTaGTCAGCGACTGAGACTCAGAGCTGGGCTGTCCCTCAGGGCCAC +
Preference number: 1 (lower is better)
Translates to: RGGSLEPWQPEPPWQ*SATETQSWAVPQGH
Trigger: GTGGCCCTGAGGGACAGCCCAGCTCTGAGTCTCAGTCGCTGATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCCTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR GCA 90 bp GTTACTGAAGGCAAGGAAGGGTGGCCTGTGTCACCCTGGCGGCCCTaGCTGGGTCTGCTCCTCGCTGTGCACACTGCATCACGCCCCGCT +
Preference number: 1 (lower is better)
Translates to: VTEGKEGWPVSPWRP*LGLLLAVHTASRPA
Trigger: AGCGGGGCGTGATGCAGTGTGCACAGCGAGGAGCAGACCCAGGCAGGGCCGCCAGGGTGACACAGGCCACCCTTCCTTGCCTTCAGTAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR CCA 90 bp GGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTaGGGCACACGGACACGGCCCCATCCCCTGCTGCATGCACTCGCA +
Preference number: 1 (lower is better)
Translates to: GQWSQSLGRSKAEGG*GTRTRPHPLLHALA
Trigger: TGCGAGTGCATGCAGCAGGGGATGGGGCCGTGTCCGTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR TCA 90 bp GTTAGGGTCCCCAGGGAAGAGCAGAACCTGGGCCCACCGAGTTACTaGAGGCAAGGAAGGGTGGCCTGTGTCACCCTGGCGGCCCTGCCT +
Preference number: 1 (lower is better)
Translates to: VRVPREEQNLGPPSY*RQGRVACVTLAALP
Trigger: AGGCAGGGCCGCCAGGGTGACACAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGGTTCTGCTCTTCCCTGGGGACCCTAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR CCA 90 bp GAGAAGCCCCAAGGTGGTGAGGAGGAGGAGGTAGCCCTCCCCGGCTaGCTGCCGAATACTGCATCTGGGACACGTGACACCCACGTGGCA +
Preference number: 1 (lower is better)
Translates to: EKPQGGEEEEVALPG*LPNTASGTRDTHVA
Trigger: TGCCACGTGGGTGTCACGTGTCCCAGATGCAGTATTCGGCAGCCAGCCGGGGAGGGCTACCTCCTCCTCCTCACCACCTTGGGGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR GCA 90 bp CTGGGTCTGCTCCTCGCTGTGCACACTGCATCACGCCCCGCTGGCTaGCTCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGAT +
Preference number: 1 (lower is better)
Translates to: LGLLLAVHTASRPAG*LPLPLPVQTHTHRD
Trigger: ATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAGGCAGCCAGCGGGGCGTGATGCAGTGTGCACAGCGAGGAGCAGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR CCA 90 bp TGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTaGGGCGGGGGCACATTTCCCATGAGAAGCCCCAAGGTGGTGAGG +
Preference number: 1 (lower is better)
Translates to: CTRMHLPACPQGRGS*GGGTFPMRSPKVVR
Trigger: CCTCACCACCTTGGGGCTTCTCATGGGAAATGTGCCCCCGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR GCA 90 bp TCCTCGCTGTGCACACTGCATCACGCCCCGCTGGCTGCCTCCCTCTaGCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACG +
Preference number: 1 (lower is better)
Translates to: SSLCTLHHAPLAASL*LFPYRRTLTEIMHT
Trigger: CGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAGGCAGCCAGCGGGGCGTGATGCAGTGTGCACAGCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR CCA 90 bp GGTCAGCTGGAGGCGAGGTTAGGGTCCCCAGGGAAGAGCAGAACCTaGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGTGTCA +
Preference number: 1 (lower is better)
Translates to: GQLEARLGSPGKSRT*AHRVTEGKEGWPVS
Trigger: TGACACAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGGTTCTGCTCTTCCCTGGGGACCCTAACCTCGCCTCCAGCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR CCA 90 bp GGAATCGCTGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTaGGCAGGAGTAAAGCCGAGGGAGGGTGGGGCACACGGACACGGC +
Preference number: 1 (lower is better)
Translates to: GIAVQEGNTDSGHSH*AGVKPREGGAHGHG
Trigger: GCCGTGTCCGTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACAGCGATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR GCA 90 bp ACCATCCCAAACATGCAACGCTGGCTTGAGGGACTGACTGCAGCCTaGTTTGCCTCCCTAGCTGCTGGGGTGGCTGGAAATAGGGCACCA +
Preference number: 1 (lower is better)
Translates to: TIPNMQRWLEGLTAA*FASLAAGVAGNRAP
Trigger: TGGTGCCCTATTTCCAGCCACCCCAGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGCGTTGCATGTTTGGGATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR CCA 90 bp CCAGAGCGCAAGACAACAGGAGCCACCATCCCAAACATGCAACGCTaGCTTGAGGGACTGACTGCAGCCTGCTTTGCCTCCCTAGCTGCT +
Preference number: 1 (lower is better)
Translates to: PERKTTGATIPNMQR*LEGLTAACFASLAA
Trigger: AGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGCGTTGCATGTTTGGGATGGTGGCTCCTGTTGTCTTGCGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp GAGGCCCAGGACCCGATGGACTTTGCCCCTAGGCAGGGGAGGGAGCCTGGAGCCGTCTGCTCCTCGCTGTaGACACTGCATCACGCCCCG +
Preference number: 2 (lower is better)
Translates to: EAQDPMDFAPRQGREPGAVCSSL*TLHHAP
Trigger: CGGGGCGTGATGCAGTGTGCACAGCGAGGAGCAGAC...GGCTCCAGGCTCCCTCCCCTGCCTAGGGGCAAAGTCCATCGGGTCCTGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp GCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGCAGCCAGGGCCTCCTTaGAGTGGCCCACCTGGAGTG +
Preference number: 2 (lower is better)
Translates to: ALACISLPVHKGEGPGAGQPGPP*SGPPGV
Trigger: CACTCCAGGTGGGCCACTCCAAGGAGGCCCTGGCTG...CCCCGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp CATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGCCTGGCGGCCCTGCCTaGGTCTGCTCCTCGCTGTGC +
Preference number: 2 (lower is better)
Translates to: HALACISLPVHKGEGPGAPGGPA*VCSSLC
Trigger: GCACAGCGAGGAGCAGACCCAGGCAGGGCCGCCAGG...CGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR TCA 90 bp GAGGCCCAGGACCCGATGGACTTTGCCCCTAGGCAGGGGAGGGAGCCTGGAGCCGAGCCTCCCTGGCAGTaGTCAGCGACTGAGACTCAG +
Preference number: 2 (lower is better)
Translates to: EAQDPMDFAPRQGREPGAEPPWQ*SATETQ
Trigger: CTGAGTCTCAGTCGCTGATCACTGCCAGGGAGGCTC...GGCTCCAGGCTCCCTCCCCTGCCTAGGGGCAAAGTCCATCGGGTCCTGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp CAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGGGCACACGGTCACCCTGGCGGCCCTaGCTGGGTCTGCTCCTCGCT +
Preference number: 2 (lower is better)
Translates to: QWSQSLGRSKAEGGWGTRSPWRP*LGLLLA
Trigger: AGCGAGGAGCAGACCCAGGCAGGGCCGCCAGGGTGA...CCGTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp GCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGCCTAGCCCAAGGGGTTaGTCCTGGGGCCGGAGGAAT +
Preference number: 2 (lower is better)
Translates to: ALACISLPVHKGEGPGAGPSPRG*SWGRRN
Trigger: ATTCCTCCGGCCCCAGGAGCAACCCCTTGGGCTAGG...CCCCGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp CACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGGGTGGCCCACCTGGAGTaGAGTGGCAGTTTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: HSHASPCLSTRERVLGRGVAHLE*SGSLGG
Trigger: GCCACCCAAACTGCCACTCCACTCCAGGTGGGCCAC...CCCCCGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp GAGGCCCAGGACCCGATGGACTTTGCCCCTAGGCAGGGGAGGGAGCCTGGAGCCACTGAGACTCAGAGCTaGGCTGTCCCTCAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: EAQDPMDFAPRQGREPGATETQS*AVPQGH
Trigger: GTGGCCCTGAGGGACAGCCCAGCTCTGAGTCTCAGT...GGCTCCAGGCTCCCTCCCCTGCCTAGGGGCAAAGTCCATCGGGTCCTGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp GCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGGGAGCCTGGAGCCATaGCAGCCTGAGCCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: ACTRMHLPACPQGRGSWGGSLEP*QPEPPW
Trigger: CCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCC...GCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp CACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGGAGGCCCAGGACCCGATaGACTTTGCCCCTAGGCAGG +
Preference number: 2 (lower is better)
Translates to: HSHASPCLSTRERVLGRGRPRTR*TLPLGR
Trigger: CCTGCCTAGGGGCAAAGTCCATCGGGTCCTGGGCCT...CCCCCGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR TCA 90 bp CAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGGGCACACGGGGAGCCATGGCAGCCTaGGCCTCCCTGGCAGTGATC +
Preference number: 2 (lower is better)
Translates to: QWSQSLGRSKAEGGWGTRGAMAA*ASLAVI
Trigger: GATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCC...CCGTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp CCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGTGTCACCCTGGCCCTCGCTGTGCACACTaGATCACGCCCCGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: PGPTELLKARKGGLCHPGPRCAH*ITPRWL
Trigger: CAGCCAGCGGGGCGTGATGCAGTGTGCACAGCGAGG...GCCAGGGTGACACAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp TGCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGTCACCCTGGCGGCCCTaGCTGGGTCTGCTCCTCGCT +
Preference number: 2 (lower is better)
Translates to: CMHSHASPCLSTRERVLGSPWRP*LGLLLA
Trigger: AGCGAGGAGCAGACCCAGGCAGGGCCGCCAGGGTGA...CCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp GAGGGAGCCTGGAGCCATGGCAGCCTGAGCCTCCCTGGCAGTGATCAGCGACTGGTGGCCCACCTGGAGTaGAGTGGCAGTTTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: EGAWSHGSLSLPGSDQRLVAHLE*SGSLGG
Trigger: GCCACCCAAACTGCCACTCCACTCCAGGTGGGCCAC...CAGTCGCTGATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp CCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGTGTCACCCTGGCGGGACGGAGGGCCCATaGCAGAGAAGGGAGCATGGG +
Preference number: 2 (lower is better)
Translates to: PGPTELLKARKGGLCHPGGTEGP*QRREHG
Trigger: CCCATGCTCCCTTCTCTGCCATGGGCCCTCCGTCCC...GCCAGGGTGACACAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp CACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGGGGACTGACTGCAGCCTaGTTTGCCTCCCTAGCTGCT +
Preference number: 2 (lower is better)
Translates to: HSHASPCLSTRERVLGRGGLTAA*FASLAA
Trigger: AGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCC...CCCCCGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp GCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGTCAGGGCTCTGCTTGTaGGGACAGCTGGAGAGGACA +
Preference number: 2 (lower is better)
Translates to: ALACISLPVHKGEGPGAGSGLCL*GQLERT
Trigger: TGTCCTCTCCAGCTGTCCCCACAAGCAGAGCCCTGA...CCCCGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp GAGGGAGCCTGGAGCCATGGCAGCCTGAGCCTCCCTGGCAGTGATCAGCGACTGAAAAGCAGCACCATGTaGCCAGCTGGTCCCCACCCC +
Preference number: 2 (lower is better)
Translates to: EGAWSHGSLSLPGSDQRLKSSTM*PAGPHP
Trigger: GGGGTGGGGACCAGCTGGCCACATGGTGCTGCTTTT...CAGTCGCTGATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp CGAGTTACTGAAGGCAAGGAAGGGTGGCCTGTGTCACCCTGGCGGCCCTGCCTGCACTCACAGAGATCATaGACACGACACGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: RVTEGKEGWPVSPWRPCLHSQRS*TRHGAG
Trigger: CCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTG...CAGGCAGGGCCGCCAGGGTGACACAGGCCACCCTTCCTTGCCTTCAGTAACTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp CAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGGGCACACGGGGCCCCATCCCCTGCTaGATGCACTCGCATGCATCT +
Preference number: 2 (lower is better)
Translates to: QWSQSLGRSKAEGGWGTRGPIPC*MHSHAS
Trigger: AGATGCATGCGAGTGCATGCAGCAGGGGATGGGGCC...CCGTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp CTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGGCACATTTCCCATGAGAAGCCCAAAAGCAGCACCATGTaGCCAGCTGGTCCCCACCCC +
Preference number: 2 (lower is better)
Translates to: LSTRERVLGRGHISHEKPKSSTM*PAGPHP
Trigger: GGGGTGGGGACCAGCTGGCCACATGGTGCTGCTTTT...GGGCTTCTCATGGGAAATGTGCCCCCGCCCCAGGACCCTCTCCCTTGTGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp ATGCAACGCTGGCTTGAGGGACTGACTGCAGCCTGCTTTGCCTCCCTAGCTGCTGGGAGCCTGGAGCCATaGCAGCCTGAGCCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: MQRWLEGLTAACFASLAAGSLEP*QPEPPW
Trigger: CCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCC...AGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGCGTTGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp CTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGGCACATTTCCCATGAGAAGCCCGTAGCCCTCCCCGGCTaGCTGCCGAATACTGCATCT +
Preference number: 2 (lower is better)
Translates to: LSTRERVLGRGHISHEKPVALPG*LPNTAS
Trigger: AGATGCAGTATTCGGCAGCCAGCCGGGGAGGGCTAC...GGGCTTCTCATGGGAAATGTGCCCCCGCCCCAGGACCCTCTCCCTTGTGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR TCA 90 bp GAGGGAGCCTGGAGCCATGGCAGCCTGAGCCTCCCTGGCAGTGATCAGCGACTGACCTCTCCCCTAACCTaGAAAGCAGCACCATGTGGC +
Preference number: 2 (lower is better)
Translates to: EGAWSHGSLSLPGSDQRLTSPLT*KAAPCG
Trigger: GCCACATGGTGCTGCTTTTCAGGTTAGGGGAGAGGT...CAGTCGCTGATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR TCA 90 bp GCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCCAACAGTGGAGGCGATaGCGATGCCCAGGATCACAC +
Preference number: 2 (lower is better)
Translates to: ACTRMHLPACPQGRGSWGQQWRR*RCPGSH
Trigger: GTGTGATCCTGGGCATCGTCATCGCCTCCACTGTTG...GCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395156.7
3UTR-3UTR GCA 90 bp TGCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCACTCACAGAGATCATaGACACGACACGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: CMHSHASPCLSTRERVLGHSQRS*TRHGAG
Trigger: CCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTG...CCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp CGCTGGCTGCCTCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCACTGGCTGCCTCCCTCTaGCTCTTCCCGTACAGACGC +
Preference number: 2 (lower is better)
Translates to: RWLPPSASSRTDAHSQRSLAASL*LFPYRR
Trigger: GCGTCTGTACGGGAAGAGGCAGAGGGAGGCAGCCAG...TGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAGGCAGCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp TGGCTGCCGAATACTGCATCTGGGACACGTGACACCCACGTGGCACATCGATGGCCTCGCTGTGCACACTaGATCACGCCCCGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: WLPNTASGTRDTHVAHRWPRCAH*ITPRWL
Trigger: CAGCCAGCGGGGCGTGATGCAGTGTGCACAGCGAGG...CCATCGATGTGCCACGTGGGTGTCACGTGTCCCAGATGCAGTATTCGGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp TGCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGGCTTGTGGGGACAGCTaGAGAGGACAGGGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: CMHSHASPCLSTRERVLGACGDS*RGQGRS
Trigger: TGACCTGCCCTGTCCTCTCCAGCTGTCCCCACAAGC...CCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp CAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGGGCACACGGTCAGGGCTCTGCTTGTaGGGACAGCTGGAGAGGACA +
Preference number: 2 (lower is better)
Translates to: QWSQSLGRSKAEGGWGTRSGLCL*GQLERT
Trigger: TGTCCTCTCCAGCTGTCCCCACAAGCAGAGCCCTGA...CCGTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR TCA 90 bp GAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGTGTGGGAAGGGAAGCTaGGGCCCAGGACCCGATGGA +
Preference number: 2 (lower is better)
Translates to: EGNTDSGHSHWAGVKPRECGKGS*GPGPDG
Trigger: TCCATCGGGTCCTGGGCCTCAGCTTCCCTTCCCACA...CTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp CTCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACGGGACGGAGGGCCCATaGCAGAGAAGGGAGCATGGG +
Preference number: 2 (lower is better)
Translates to: LPLPLPVQTHTHRDHAHDGTEGP*QRREHG
Trigger: CCCATGCTCCCTTCTCTGCCATGGGCCCTCCGTCCC...GTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp TGCTGCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGACTGAGACTCAGAGCTaGGCTGTCCCTCAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: CCMHSHASPCLSTRERVLTETQS*AVPQGH
Trigger: GTGGCCCTGAGGGACAGCCCAGCTCTGAGTCTCAGT...CAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp GAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGAGGCCCAGGACCCGATaGACTTTGCCCCTAGGCAGG +
Preference number: 2 (lower is better)
Translates to: EGNTDSGHSHWAGVKPRERPRTR*TLPLGR
Trigger: CCTGCCTAGGGGCAAAGTCCATCGGGTCCTGGGCCT...CTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp GAATCGCTGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGAAAGCCGAGGGAGGGTaGGGCACACGGACACGGCCC +
Preference number: 2 (lower is better)
Translates to: ESLFKKATRTVVTVTGQEKAEGG*GTRTRP
Trigger: GGGCCGTGTCCGTGTGCCCCACCCTCCCTCGGCTTT...CTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACAGCGATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR TCA 90 bp CTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGGCACATTTCCCATGAGAAGCCCACTGCAGGCCTGAAATaGCATCTGACTTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: LSTRERVLGRGHISHEKPTAGLK*HLTSQS
Trigger: GCTCTGGGAAGTCAGATGTCATTTCAGGCCTGCAGT...GGGCTTCTCATGGGAAATGTGCCCCCGCCCCAGGACCCTCTCCCTTGTGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp GACTTCCCAGAGCGCAAGACAACAGGAGCCACCATCCCAAACATGCAACGCTGGCACCCCTCAGGGCTCTaGTTGTGGGGACAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: DFPERKTTGATIPNMQRWHPSGL*LWGQLE
Trigger: CTCCAGCTGTCCCCACAAGCAGAGCCCTGAGGGGTG...CCAGCGTTGCATGTTTGGGATGGTGGCTCCTGTTGTCTTGCGCTCTGGGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp TGCTGCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGTCGCATGCATCTCCCTaGCTGTCCACAAGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: CCMHSHASPCLSTRERVLSHASP*LSTRER
Trigger: CCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGA...CAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp TGCTGCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGTTGGAGTGGCCCACCTaGAGTGGAGTGGCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: CCMHSHASPCLSTRERVLLEWPT*SGVAVW
Trigger: CCAAACTGCCACTCCACTCCAGGTGGGCCACTCCAA...CAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp CAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGGGCACACGGACATCGATGGGAGGATaGCAAGGGCAGGATGAGACT +
Preference number: 2 (lower is better)
Translates to: QWSQSLGRSKAEGGWGTRTSMGG*QGQDET
Trigger: AGTCTCATCCTGCCCTTGCCATCCTCCCATCGATGT...CCGTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR TCA 90 bp GAATCGCTGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGGGCCCACCGAGTTACTaGAGGCAAGGAAGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: ESLFKKATRTVVTVTGQEGPPSY*RQGRVA
Trigger: GGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCC...CTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACAGCGATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR TCA 90 bp ATGCAACGCTGGCTTGAGGGACTGACTGCAGCCTGCTTTGCCTCCCTAGCTGCTGCAGTGATCAGCGACTaGGACTCAGAGCTGGGCTGT +
Preference number: 2 (lower is better)
Translates to: MQRWLEGLTAACFASLAAAVISD*DSELGC
Trigger: ACAGCCCAGCTCTGAGTCTCAGTCGCTGATCACTGC...AGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGCGTTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp GAATCGCTGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGGTCTGCTCCTCGCTGTaGACACTGCATCACGCCCCG +
Preference number: 2 (lower is better)
Translates to: ESLFKKATRTVVTVTGQEVCSSL*TLHHAP
Trigger: CGGGGCGTGATGCAGTGTGCACAGCGAGGAGCAGAC...CTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACAGCGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp TGGCTGCCGAATACTGCATCTGGGACACGTGACACCCACGTGGCACATCGATGGGCTTCTAGGCGAAGATaGCCCCAACAGTGGAGGCGA +
Preference number: 2 (lower is better)
Translates to: WLPNTASGTRDTHVAHRWASRRR*PQQWRR
Trigger: TCGCCTCCACTGTTGGGGGCATCTTCGCCTAGAAGC...CCATCGATGTGCCACGTGGGTGTCACGTGTCCCAGATGCAGTATTCGGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395156.7
3UTR-3UTR CCA 90 bp CAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGAGTGGTCACAGTCACTaGGCAGGAGTAAAGCCGAGG +
Preference number: 2 (lower is better)
Translates to: QHGQWSQSLGRSKAEGGWSGHSH*AGVKPR
Trigger: CCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACT...CCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp CGCTGGCTGCCTCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCACCACCTGGAGTGGAGTaGCAGTTTGGGTGGCTTCTA +
Preference number: 2 (lower is better)
Translates to: RWLPPSASSRTDAHSQRSPPGVE*QFGWLL
Trigger: TAGAAGCCACCCAAACTGCCACTCCACTCCAGGTGG...TGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAGGCAGCCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395156.7
3UTR-3UTR GCA 90 bp GAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGCCACCATCCCAAACATaGAACGCTGGCTTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: EGNTDSGHSHWAGVKPREPPSQT*NAGLRD
Trigger: GTCCCTCAAGCCAGCGTTGCATGTTTGGGATGGTGG...CTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp TCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGTTGGAGTGGCCCACCTaGAGTGGAGTGGCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: SASSRTDAHSQRSCTRHGLEWPT*SGVAVW
Trigger: CCAAACTGCCACTCCACTCCAGGTGGGCCACTCCAA...CCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp GAATCGCTGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGGCTTGTGGGGACAGCTaGAGAGGACAGGGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: ESLFKKATRTVVTVTGQEACGDS*RGQGRS
Trigger: TGACCTGCCCTGTCCTCTCCAGCTGTCCCCACAAGC...CTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACAGCGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp TGCTGCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGAGTGGAGTGGCAGTTTaGGTGGCTTCTAGGCGAAGA +
Preference number: 2 (lower is better)
Translates to: CCMHSHASPCLSTRERVLSGVAV*VASRRR
Trigger: TCTTCGCCTAGAAGCCACCCAAACTGCCACTCCACT...CAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395156.7
3UTR-3UTR TCA 90 bp GAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGACTGCAGGCCTGAAATaGCATCTGACTTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: EGNTDSGHSHWAGVKPRETAGLK*HLTSQS
Trigger: GCTCTGGGAAGTCAGATGTCATTTCAGGCCTGCAGT...CTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp GACTTCCCAGAGCGCAAGACAACAGGAGCCACCATCCCAAACATGCAACGCTGGGGGAAGAGCAGAACCTaGGCCCACCGAGTTACTGAA +
Preference number: 2 (lower is better)
Translates to: DFPERKTTGATIPNMQRWGKSRT*AHRVTE
Trigger: TTCAGTAACTCGGTGGGCCCAGGTTCTGCTCTTCCC...CCAGCGTTGCATGTTTGGGATGGTGGCTCCTGTTGTCTTGCGCTCTGGGAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CCA 90 bp TCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGGAGTGGCAGTTTGGGTaGCTTCTAGGCGAAGATGCC +
Preference number: 2 (lower is better)
Translates to: SASSRTDAHSQRSCTRHGEWQFG*LLGEDA
Trigger: GGCATCTTCGCCTAGAAGCCACCCAAACTGCCACTC...CCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395156.7
3UTR-3UTR CCA 90 bp ATAAAAATTTCACAAAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGAAAGCCGAGGGAGGGTaGGGCACACGGACACGGCCC +
Preference number: 2 (lower is better)
Translates to: IKISQNGQLVVPRPLVKGKAEGG*GTRTRP
Trigger: GGGCCGTGTCCGTGTGCCCCACCCTCCCTCGGCTTT...CCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTTTGTGAAATTTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR GCA 90 bp ATAAAAATTTCACAAAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGCCTAGCCCAAGGGGTTaGTCCTGGGGCCGGAGGAAT +
Preference number: 2 (lower is better)
Translates to: IKISQNGQLVVPRPLVKGPSPRG*SWGRRN
Trigger: ATTCCTCCGGCCCCAGGAGCAACCCCTTGGGCTAGG...CCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTTTGTGAAATTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR TCA 90 bp ATAAAAATTTCACAAAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGTGCATCTGGGACACGTaGCACCCACGTGGCACATCG +
Preference number: 2 (lower is better)
Translates to: IKISQNGQLVVPRPLVKGCIWDT*HPRGTS
Trigger: CGATGTGCCACGTGGGTGTCACGTGTCCCAGATGCA...CCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTTTGTGAAATTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR TCA 90 bp ATAAAAATTTCACAAAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGATGGCAAGGGCAGGATaGGACTGCAGGCCTGAAATG +
Preference number: 2 (lower is better)
Translates to: IKISQNGQLVVPRPLVKGMARAG*DCRPEM
Trigger: CATTTCAGGCCTGCAGTCTCATCCTGCCCTTGCCAT...CCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTTTGTGAAATTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CAA 90 bp GCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGAGGACCCGATGGACTTaGCCCCTAGGCAGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: ALACISLPVHKGEGPGAGRTRWT*PLGRGG
Trigger: CCCTCCCCTGCCTAGGGGCAAAGTCCATCGGGTCCT...CCCCGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR GCA 72 bp CCCATCCCCTGCTGCATGCACTCGCATGCATCTCCCTaGCTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGG +
Preference number: 3 (lower is better)
Translates to: PIPCCMHSHASP*LSTRERVLGRG
Trigger: CCCCCGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGCAGCAGGGGATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR GCA 72 bp GGCAAGGAAGGGTGGCCTGTGTCACCCTGGCGGCCCTaGCTGGGTCTGCTCCTCGCTGTGCACACTGCATCA +
Preference number: 3 (lower is better)
Translates to: GKEGWPVSPWRP*LGLLLAVHTAS
Trigger: TGATGCAGTGTGCACAGCGAGGAGCAGACCCAGGCAGGGCCGCCAGGGTGACACAGGCCACCCTTCCTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR GCA 72 bp GCCTCTTCCCGTACAGACGCACACTCACAGAGATCATaGACACGACACGGGGCGGGGACGGAGGGCCCATGG +
Preference number: 3 (lower is better)
Translates to: ASSRTDAHSQRS*TRHGAGTEGPW
Trigger: CCATGGGCCCTCCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR CCA 72 bp TCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTaGGGCACACGGACACGGCCCCATCCCCTGCTGCAT +
Preference number: 3 (lower is better)
Translates to: SQSLGRSKAEGG*GTRTRPHPLLH
Trigger: ATGCAGCAGGGGATGGGGCCGTGTCCGTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CAA 90 bp GGAAGAGCAGAACCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGGCAGCCAGGGCCTCCTaGGAGTGGCCCACCTGGAGT +
Preference number: 3 (lower is better)
Translates to: GRAEPGPTELLKARKGGLAARAS*EWPTWS
Trigger: ACTCCAGGTGGGCCACTCCAAGGAGGCCCTGGCTGC...CAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGGTTCTGCTCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR TCA 72 bp AGCCTGGAGCCATGGCAGCCTGAGCCTCCCTGGCAGTaGTCAGCGACTGAGACTCAGAGCTGGGCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: SLEPWQPEPPWQ*SATETQSWAVP
Trigger: AGGGACAGCCCAGCTCTGAGTCTCAGTCGCTGATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR CCA 72 bp CAAGGTGGTGAGGAGGAGGAGGTAGCCCTCCCCGGCTaGCTGCCGAATACTGCATCTGGGACACGTGACACC +
Preference number: 3 (lower is better)
Translates to: QGGEEEEVALPG*LPNTASGTRDT
Trigger: GGTGTCACGTGTCCCAGATGCAGTATTCGGCAGCCAGCCGGGGAGGGCTACCTCCTCCTCCTCACCACCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CAA 90 bp TCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGGCAGCCAGGGCCTCCTaGGAGTGGCCCACCTGGAGT +
Preference number: 3 (lower is better)
Translates to: SASSRTDAHSQRSCTRHGAARAS*EWPTWS
Trigger: ACTCCAGGTGGGCCACTCCAAGGAGGCCCTGGCTGC...CCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR CCA 72 bp GAGGCGAGGTTAGGGTCCCCAGGGAAGAGCAGAACCTaGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGG +
Preference number: 3 (lower is better)
Translates to: EARLGSPGKSRT*AHRVTEGKEGW
Trigger: CCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGGTTCTGCTCTTCCCTGGGGACCCTAACCTCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR CCA 72 bp ATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTaGGGCGGGGGCACATTTCCCATGAGAAGCCCCAAG +
Preference number: 3 (lower is better)
Translates to: MHLPACPQGRGS*GGGTFPMRSPK
Trigger: CTTGGGGCTTCTCATGGGAAATGTGCCCCCGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR-3UTR CAA 90 bp GACTTCCCAGAGCGCAAGACAACAGGAGCCACCATCCCAAACATGCAACGCTGGAGGACCCGATGGACTTaGCCCCTAGGCAGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: DFPERKTTGATIPNMQRWRTRWT*PLGRGG
Trigger: CCCTCCCCTGCCTAGGGGCAAAGTCCATCGGGTCCT...CCAGCGTTGCATGTTTGGGATGGTGGCTCCTGTTGTCTTGCGCTCTGGGAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR CCA 72 bp GTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTaGGCAGGAGTAAAGCCGAGGGAGGGTGGGGCACAC +
Preference number: 3 (lower is better)
Translates to: VQEGNTDSGHSH*AGVKPREGGAH
Trigger: GTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR TCA 72 bp AACAGGAGCCACCATCCCAAACATGCAACGCTGGCTTaGGGGACTGACTGCAGCCTGCTTTGCCTCCCTAGC +
Preference number: 3 (lower is better)
Translates to: NRSHHPKHATLA*GTDCSLLCLPS
Trigger: GCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGCGTTGCATGTTTGGGATGGTGGCTCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
3UTR CCA 72 bp AAGACAACAGGAGCCACCATCCCAAACATGCAACGCTaGCTTGAGGGACTGACTGCAGCCTGCTTTGCCTCC +
Preference number: 3 (lower is better)
Translates to: KTTGATIPNMQR*LEGLTAACFAS
Trigger: GGAGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGCGTTGCATGTTTGGGATGGTGGCTCCTGTTGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp TGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCGGGTTCGGTCCTTCATaGTCCCGGGAGTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: CQSSLPAGPGAPELQRAPGFGPS*SREWQR
Trigger: CCGCTGCCACTCCCGGGAGCATGAAGGACCGAACCC...GGGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR GCA 90 bp CTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCCAGCTGCCTCTGGATaGGGCCTTTGCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: LSIISPCGAGGTRAPEGPPAASG*GLCSAR
Trigger: GCGAGCGCTGCAAAGGCCGCATCCAGAGGCAGCTGG...GGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR TCA 90 bp CTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCTCGTGGTCCTGCCGGTaGTCTCCAGCTGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LSIISPCGAGGTRAPEGPSWSCR*SPAASG
Trigger: TCCAGAGGCAGCTGGAGATCACCGGCAGGACCACGA...GGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR GCA 90 bp TGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCTCTGGATGCGGCCTTTaGAGCGCTCGCGGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: CQSSLPAGPGAPELQRAPSGCGL*SARGSR
Trigger: CCGACTACCGCGAGCGCTGCAAAGGCCGCATCCAGA...GGGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CCA 90 bp GCACACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGAGGGCCCATGGCCTGGCGGCCCTGCCTaGGTCTGCTCCTCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: AHSQRSCTRHGAGTEGPWPGGPA*VCSSLC
Trigger: GCACAGCGAGGAGCAGACCCAGGCAGGGCCGCCAGG...CCATGGGCCCTCCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp ATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCGGCCCGGCACTCACCTaGCTCTCCACGAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: ILSIISPCGAGGTRAPEGGPALT*LSTSMA
Trigger: GGCCATGCTCGTGGAGAGCCAGGTGAGTGCCGGGCC...GCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CCA 90 bp CTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCTGAGGCTGAGAACTTaGTCCCTCCCCGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSIISPCGAGGTRAPEGPLRLRT*SLPGRA
Trigger: TGCCCTGCCGGGGAGGGACCAAGTTCTCAGCCTCAG...GGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR TCA 90 bp GGTCTGCTCCTCGCTGTGCACACTGCATCACGCCCCGCTGGCTGCCTCCCTCTGGGAGCCATGGCAGCCTaGGCCTCCCTGGCAGTGATC +
Preference number: 4 (lower is better)
Translates to: GLLLAVHTASRPAGCLPLGAMAA*ASLAVI
Trigger: GATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCC...CAGAGGGAGGCAGCCAGCGGGGCGTGATGCAGTGTGCACAGCGAGGAGCAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp ATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCGCTGTCCTTGGCCGTaGGGAGCTCCTGGGTTCGGT +
Preference number: 4 (lower is better)
Translates to: ILSIISPCGAGGTRAPEGRCPWP*GAPGFG
Trigger: ACCGAACCCAGGAGCTCCGCACGGCCAAGGACAGCG...GCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR GCA 90 bp GCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGCCTCGCTGTGCACACTaGATCACGCCCCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ALACISLPVHKGEGPGAGPRCAH*ITPRWL
Trigger: CAGCCAGCGGGGCGTGATGCAGTGTGCACAGCGAGG...CCCCGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp GAGGGAGCCTGGAGCCATGGCAGCCTGAGCCTCCCTGGCAGTGATCAGCGACTGTCACCCTGGCGGCCCTaGCTGGGTCTGCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: EGAWSHGSLSLPGSDQRLSPWRP*LGLLLA
Trigger: AGCGAGGAGCAGACCCAGGCAGGGCCGCCAGGGTGA...CAGTCGCTGATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCCGGCGCGCCTTGCTCTaGTACTTGACGGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: CQSSLPAGPGAPELQRAPRRALL*YLTAFL
Trigger: CAAGAAGGCCGTCAAGTACCAGAGCAAGGCGCGCCG...GGGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CCA 90 bp GAGGCCCAGGACCCGATGGACTTTGCCCCTAGGCAGGGGAGGGAGCCTGGAGCCGTGGCCCACCTGGAGTaGAGTGGCAGTTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: EAQDPMDFAPRQGREPGAVAHLE*SGSLGG
Trigger: GCCACCCAAACTGCCACTCCACTCCAGGTGGGCCAC...GGCTCCAGGCTCCCTCCCCTGCCTAGGGGCAAAGTCCATCGGGTCCTGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GAGGGAGCCTGGAGCCATGGCAGCCTGAGCCTCCCTGGCAGTGATCAGCGACTGGGGAGCCTGGAGCCATaGCAGCCTGAGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: EGAWSHGSLSLPGSDQRLGSLEP*QPEPPW
Trigger: CCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCC...CAGTCGCTGATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCAGGTTAGTGCAGCCCTaGGTGCTGGTGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LSIISPCGAGGTRAPEGPRLVQP*VLVWAG
Trigger: TCCAGCCCACACCAGCACCCAGGGCTGCACTAACCT...GGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR TCA 90 bp GAGGCCCAGGACCCGATGGACTTTGCCCCTAGGCAGGGGAGGGAGCCTGGAGCCGCTGGCTTGAGGGACTaGCTGCAGCCTGCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: EAQDPMDFAPRQGREPGAAGLRD*LQPALP
Trigger: AGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGC...GGCTCCAGGCTCCCTCCCCTGCCTAGGGGCAAAGTCCATCGGGTCCTGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp GCACACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGAGGGCCCATGGCCAGCTGCCTCTGGATaGGGCCTTTGCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: AHSQRSCTRHGAGTEGPWPAASG*GLCSAR
Trigger: GCGAGCGCTGCAAAGGCCGCATCCAGAGGCAGCTGG...CCATGGGCCCTCCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGGCCGTGCGGAGCTCCTaGGTTCGGTCCTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: ALACISLPVHKGEGPGAGAVRSS*VRSFML
Trigger: GAGCATGAAGGACCGAACCCAGGAGCTCCGCACGGC...CCCCGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp ATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCGCCGTGCGGAGCTCCTaGGTTCGGTCCTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: ILSIISPCGAGGTRAPEGAVRSS*VRSFML
Trigger: GAGCATGAAGGACCGAACCCAGGAGCTCCGCACGGC...GCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CCA 90 bp ATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCATCATCGCTGTCCTTaGCCGTGCGGAGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ILSIISPCGAGGTRAPEGHHRCP*PCGAPG
Trigger: CCCAGGAGCTCCGCACGGCCAAGGACAGCGATGATG...GCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CCA 90 bp TGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCTGGGGGATGCCAGGATaGCACTGTGCTTCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: CQSSLPAGPGAPELQRAPWGMPG*HCASAS
Trigger: TGAAGCGGAAGCACAGTGCCATCCTGGCATCCCCCA...GGGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CCA 90 bp GCACACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGAGGGCCCATGGCAGCCAGGGCCTCCTTaGAGTGGCCCACCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: AHSQRSCTRHGAGTEGPWQPGPP*SGPPGV
Trigger: CACTCCAGGTGGGCCACTCCAAGGAGGCCCTGGCTG...CCATGGGCCCTCCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp GAGGCCCAGGACCCGATGGACTTTGCCCCTAGGCAGGGGAGGGAGCCTGGAGCCGCAGTGATCAGCGACTaGGACTCAGAGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: EAQDPMDFAPRQGREPGAAVISD*DSELGC
Trigger: ACAGCCCAGCTCTGAGTCTCAGTCGCTGATCACTGC...GGCTCCAGGCTCCCTCCCCTGCCTAGGGGCAAAGTCCATCGGGTCCTGGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp GGTCTGCTCCTCGCTGTGCACACTGCATCACGCCCCGCTGGCTGCCTCCCTCTGGCTGGCTTGAGGGACTaGCTGCAGCCTGCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: GLLLAVHTASRPAGCLPLAGLRD*LQPALP
Trigger: AGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGC...CAGAGGGAGGCAGCCAGCGGGGCGTGATGCAGTGTGCACAGCGAGGAGCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGGGCACACGGGGGTTCGGTCCTTCATaGTCCCGGGAGTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: QWSQSLGRSKAEGGWGTRGFGPS*SREWQR
Trigger: CCGCTGCCACTCCCGGGAGCATGAAGGACCGAACCC...CCGTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp ATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCGCCAGGATGGCACTGTaGTTCCGCTTCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ILSIISPCGAGGTRAPEGARMAL*FRFTSS
Trigger: GGAGGAGGTGAAGCGGAAGCACAGTGCCATCCTGGC...GCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR GCA 90 bp CTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCATCTCGCTCAGAGCCTaGTTCGAGATGCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LSIISPCGAGGTRAPEGPISLRA*FEMLES
Trigger: GGACTCCAGCATCTCGAAGCAGGCTCTGAGCGAGAT...GGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR GCA 90 bp GAGGGAGCCTGGAGCCATGGCAGCCTGAGCCTCCCTGGCAGTGATCAGCGACTGCACCCCTCAGGGCTCTaGTTGTGGGGACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: EGAWSHGSLSLPGSDQRLHPSGL*LWGQLE
Trigger: CTCCAGCTGTCCCCACAAGCAGAGCCCTGAGGGGTG...CAGTCGCTGATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GGAAGAGCAGAACCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGCCTGGCGGCCCTGCCTaGGTCTGCTCCTCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GRAEPGPTELLKARKGGLPGGPA*VCSSLC
Trigger: GCACAGCGAGGAGCAGACCCAGGCAGGGCCGCCAGG...CAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGGTTCTGCTCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGGGGGCCGGAGGAATGTaGGAAGGGAAGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PVQTHTHRDHAHDTGRGRGAGGM*EGKLRP
Trigger: GGGCCTCAGCTTCCCTTCCCACATTCCTCCGGCCCC...CCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp ACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGAGGGCCCATGGCAGAGGCCCACCGAGTTACTaGAGGCAAGGAAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: THRDHAHDTGRGRRAHGRGPPSY*RQGRVA
Trigger: GGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCC...TCTGCCATGGGCCCTCCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp ACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGAGGGCCCATGGCAGATGTGGGAAGGGAAGCTaGGGCCCAGGACCCGATGGA +
Preference number: 4 (lower is better)
Translates to: THRDHAHDTGRGRRAHGRCGKGS*GPGPDG
Trigger: TCCATCGGGTCCTGGGCCTCAGCTTCCCTTCCCACA...TCTGCCATGGGCCCTCCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp GAGGCCCAGGACCCGATGGACTTTGCCCCTAGGCAGGGGAGGGAGCCTGGAGCCATGGCAAGGGCAGGATaGGACTGCAGGCCTGAAATG +
Preference number: 4 (lower is better)
Translates to: EAQDPMDFAPRQGREPGAMARAG*DCRPEM
Trigger: CATTTCAGGCCTGCAGTCTCATCCTGCCCTTGCCAT...GGCTCCAGGCTCCCTCCCCTGCCTAGGGGCAAAGTCCATCGGGTCCTGGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGTGTCACCCTGGCCTGGCTGCCTCCCTCTaGCTCTTCCCGTACAGACGC +
Preference number: 4 (lower is better)
Translates to: PGPTELLKARKGGLCHPGLAASL*LFPYRR
Trigger: GCGTCTGTACGGGAAGAGGCAGAGGGAGGCAGCCAG...GCCAGGGTGACACAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGGCACATTTCCCATGAGAAGCCCCTGGCTGCCTCCCTCTaGCTCTTCCCGTACAGACGC +
Preference number: 4 (lower is better)
Translates to: LSTRERVLGRGHISHEKPLAASL*LFPYRR
Trigger: GCGTCTGTACGGGAAGAGGCAGAGGGAGGCAGCCAG...GGGCTTCTCATGGGAAATGTGCCCCCGCCCCAGGACCCTCTCCCTTGTGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGTCACCCTGGCGGCCCTaGCTGGGTCTGCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: QHGQWSQSLGRSKAEGGWSPWRP*LGLLLA
Trigger: AGCGAGGAGCAGACCCAGGCAGGGCCGCCAGGGTGA...CCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGCCTAGCCCAAGGGGTTaGTCCTGGGGCCGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: HALACISLPVHKGEGPGAPSPRG*SWGRRN
Trigger: ATTCCTCCGGCCCCAGGAGCAACCCCTTGGGCTAGG...CGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGGGCACACGGCCTAGCCCAAGGGGTTaGTCCTGGGGCCGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: QWSQSLGRSKAEGGWGTRPSPRG*SWGRRN
Trigger: ATTCCTCCGGCCCCAGGAGCAACCCCTTGGGCTAGG...CCGTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCACTTTCTGGACAGCGTaGAGTGCTGTGTCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: CQSSLPAGPGAPELQRAPTFWTA*SAVSSG
Trigger: TCCGGAAGACACAGCACTCCACGCTGTCCAGAAAGT...GGGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CCA 90 bp TGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCCCTCCACAAACTTTCTaGACAGCGTGGAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: CQSSLPAGPGAPELQRAPPPQTF*TAWSAV
Trigger: CACAGCACTCCACGCTGTCCAGAAAGTTTGTGGAGG...GGGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CCA 90 bp ATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCTCCCAGAGGCAAAGATaGCGGGGTTCCCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: ILSIISPCGAGGTRAPEGSQRQR*RGSHSP
Trigger: TGGAGAGTGGGAACCCCGCCATCTTTGCCTCTGGGA...GCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CCA 90 bp TGCTGCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGAGCCTGGAGCCATaGCAGCCTGAGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: CCMHSHASPCLSTRERVLGSLEP*QPEPPW
Trigger: CCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCC...CAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGAGGCCCAGGACCCGATaGACTTTGCCCCTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HALACISLPVHKGEGPGARPRTR*TLPLGR
Trigger: CCTGCCTAGGGGCAAAGTCCATCGGGTCCTGGGCCT...CGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGGGCACACGGCCAAGGGGTTGCTCCTaGGGCCGGAGGAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: QWSQSLGRSKAEGGWGTRPRGCS*GRRNVG
Trigger: TCCCACATTCCTCCGGCCCCAGGAGCAACCCCTTGG...CCGTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CGCTGGCTGCCTCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCAAAAGCCGAGGGAGGGTaGGGCACACGGACACGGCCC +
Preference number: 4 (lower is better)
Translates to: RWLPPSASSRTDAHSQRSKAEGG*GTRTRP
Trigger: GGGCCGTGTCCGTGTGCCCCACCCTCCCTCGGCTTT...TGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAGGCAGCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp ATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCGGTCTCGGTCCACGGTaGCAGCGACATCATCATCAT +
Preference number: 4 (lower is better)
Translates to: ILSIISPCGAGGTRAPEGGLGPR*QRHHHH
Trigger: ATGATGATGATGTCGCTGTCACCGTGGACCGAGACC...GCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR TCA 90 bp CTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCTGCGATCTTGTCAATaGAGCCTCGAATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LSIISPCGAGGTRAPEGPLRSCQ*SLESPP
Trigger: TGGAGGAGATTCGAGGCTTCATTGACAAGATCGCAG...GGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR TCA 90 bp CAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGGGAGCCATGGCAGCCTaGGCCTCCCTGGCAGTGATC +
Preference number: 4 (lower is better)
Translates to: QHGQWSQSLGRSKAEGGWGAMAA*ASLAVI
Trigger: GATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCC...CCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp TGCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGTGTGGGAAGGGAAGCTaGGGCCCAGGACCCGATGGA +
Preference number: 4 (lower is better)
Translates to: CMHSHASPCLSTRERVLGCGKGS*GPGPDG
Trigger: TCCATCGGGTCCTGGGCCTCAGCTTCCCTTCCCACA...CCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp GAGGCCCAGGACCCGATGGACTTTGCCCCTAGGCAGGGGAGGGAGCCTGGAGCCACTGCAGGCCTGAAATaGCATCTGACTTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: EAQDPMDFAPRQGREPGATAGLK*HLTSQS
Trigger: GCTCTGGGAAGTCAGATGTCATTTCAGGCCTGCAGT...GGCTCCAGGCTCCCTCCCCTGCCTAGGGGCAAAGTCCATCGGGTCCTGGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp GGTCTGCTCCTCGCTGTGCACACTGCATCACGCCCCGCTGGCTGCCTCCCTCTGATGGCAAGGGCAGGATaGGACTGCAGGCCTGAAATG +
Preference number: 4 (lower is better)
Translates to: GLLLAVHTASRPAGCLPLMARAG*DCRPEM
Trigger: CATTTCAGGCCTGCAGTCTCATCCTGCCCTTGCCAT...CAGAGGGAGGCAGCCAGCGGGGCGTGATGCAGTGTGCACAGCGAGGAGCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp CCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGTGTCACCCTGGCTGCATCTGGGACACGTaGCACCCACGTGGCACATCG +
Preference number: 4 (lower is better)
Translates to: PGPTELLKARKGGLCHPGCIWDT*HPRGTS
Trigger: CGATGTGCCACGTGGGTGTCACGTGTCCCAGATGCA...GCCAGGGTGACACAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp CCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGTGCATCTGGGACACGTaGCACCCACGTGGCACATCG +
Preference number: 4 (lower is better)
Translates to: PVQTHTHRDHAHDTGRGRCIWDT*HPRGTS
Trigger: CGATGTGCCACGTGGGTGTCACGTGTCCCAGATGCA...CCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCTCCTCCACGTTCTCTaGGATCTTGTCAATGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSIISPCGAGGTRAPEGPLLHVL*DLVNEA
Trigger: GGCTTCATTGACAAGATCGCAGAGAACGTGGAGGAG...GGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR GCA 90 bp CAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGCCTCGCTGTGCACACTaGATCACGCCCCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QHGQWSQSLGRSKAEGGWPRCAH*ITPRWL
Trigger: CAGCCAGCGGGGCGTGATGCAGTGTGCACAGCGAGG...CCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CGAGTTACTGAAGGCAAGGAAGGGTGGCCTGTGTCACCCTGGCGGCCCTGCCTGGGCCCCATCCCCTGCTaGATGCACTCGCATGCATCT +
Preference number: 4 (lower is better)
Translates to: RVTEGKEGWPVSPWRPCLGPIPC*MHSHAS
Trigger: AGATGCATGCGAGTGCATGCAGCAGGGGATGGGGCC...CAGGCAGGGCCGCCAGGGTGACACAGGCCACCCTTCCTTGCCTTCAGTAACTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGGCACATTTCCCATGAGAAGCCCGGCCCCATCCCCTGCTaGATGCACTCGCATGCATCT +
Preference number: 4 (lower is better)
Translates to: LSTRERVLGRGHISHEKPGPIPC*MHSHAS
Trigger: AGATGCATGCGAGTGCATGCAGCAGGGGATGGGGCC...GGGCTTCTCATGGGAAATGTGCCCCCGCCCCAGGACCCTCTCCCTTGTGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGGGCACACGGCGGCGCGCCTTGCTCTaGTACTTGACGGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: QWSQSLGRSKAEGGWGTRRRALL*YLTAFL
Trigger: CAAGAAGGCCGTCAAGTACCAGAGCAAGGCGCGCCG...CCGTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGGAGTGGCAGTTTGGGTaGCTTCTAGGCGAAGATGCC +
Preference number: 4 (lower is better)
Translates to: ALACISLPVHKGEGPGAGEWQFG*LLGEDA
Trigger: GGCATCTTCGCCTAGAAGCCACCCAAACTGCCACTC...CCCCGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GAGGGAGCCTGGAGCCATGGCAGCCTGAGCCTCCCTGGCAGTGATCAGCGACTGTTGGAGTGGCCCACCTaGAGTGGAGTGGCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: EGAWSHGSLSLPGSDQRLLEWPT*SGVAVW
Trigger: CCAAACTGCCACTCCACTCCAGGTGGGCCACTCCAA...CAGTCGCTGATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CGCTGGCTGCCTCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCAGGGACGGAGGGCCCATaGCAGAGAAGGGAGCATGGG +
Preference number: 4 (lower is better)
Translates to: RWLPPSASSRTDAHSQRSGTEGP*QRREHG
Trigger: CCCATGCTCCCTTCTCTGCCATGGGCCCTCCGTCCC...TGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAGGCAGCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGTGTCACCCTGGCGCTTGTGGGGACAGCTaGAGAGGACAGGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PGPTELLKARKGGLCHPGACGDS*RGQGRS
Trigger: TGACCTGCCCTGTCCTCTCCAGCTGTCCCCACAAGC...GCCAGGGTGACACAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CGAGTTACTGAAGGCAAGGAAGGGTGGCCTGTGTCACCCTGGCGGCCCTGCCTGAAAAGCAGCACCATGTaGCCAGCTGGTCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: RVTEGKEGWPVSPWRPCLKSSTM*PAGPHP
Trigger: GGGGTGGGGACCAGCTGGCCACATGGTGCTGCTTTT...CAGGCAGGGCCGCCAGGGTGACACAGGCCACCCTTCCTTGCCTTCAGTAACTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGGTAGCCCTCCCCGGCTaGCTGCCGAATACTGCATCT +
Preference number: 4 (lower is better)
Translates to: HALACISLPVHKGEGPGAVALPG*LPNTAS
Trigger: AGATGCAGTATTCGGCAGCCAGCCGGGGAGGGCTAC...CGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp CGCTGGCTGCCTCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATCGTGGTCCTGCCGGTaGTCTCCAGCTGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RWLPPSASSRTDAHSQRSSWSCR*SPAASG
Trigger: TCCAGAGGCAGCTGGAGATCACCGGCAGGACCACGA...TGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAGGCAGCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp GATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGGCATGGCCATGTCCATaGACATGTCGTGTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: DPVNHLSLRGRGHPSSRGAWPCP*TCRVAH
Trigger: GTGAGCTACACGACATGTTCATGGACATGGCCATGC...CCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR GCA 90 bp ATGCAACGCTGGCTTGAGGGACTGACTGCAGCCTGCTTTGCCTCCCTAGCTGCTGGGTTCGGTCCTTCATaGTCCCGGGAGTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: MQRWLEGLTAACFASLAAGFGPS*SREWQR
Trigger: CCGCTGCCACTCCCGGGAGCATGAAGGACCGAACCC...AGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGCGTTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp GATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGTTCAGGCCTTCCTCTTaGTCGATGGACTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: DPVNHLSLRGRGHPSSRGFRPSS*SMDCSM
Trigger: CATCGAGCAGTCCATCGAGCAAGAGGAAGGCCTGAA...CCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR GCA 90 bp CTTCTAGGCGAAGATGCCCCCAACAGTGGAGGCGATGACGATGCCCAGGATCACCCAGCTGCCTCTGGATaGGGCCTTTGCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: LLGEDAPNSGGDDDAQDHPAASG*GLCSAR
Trigger: GCGAGCGCTGCAAAGGCCGCATCCAGAGGCAGCTGG...GTGATCCTGGGCATCGTCATCGCCTCCACTGTTGGGGGCATCTTCGCCTAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395156.7
CDS-3UTR GCA 90 bp CCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGGCTTCTAGGCGAAGATaGCCCCAACAGTGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: PVQTHTHRDHAHDTGRGRASRRR*PQQWRR
Trigger: TCGCCTCCACTGTTGGGGGCATCTTCGCCTAGAAGC...CCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CGCTGGCTGCCTCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCAGTCTGCTCCTCGCTGTaGACACTGCATCACGCCCCG +
Preference number: 4 (lower is better)
Translates to: RWLPPSASSRTDAHSQRSVCSSL*TLHHAP
Trigger: CGGGGCGTGATGCAGTGTGCACAGCGAGGAGCAGAC...TGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAGGCAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp GGAAGAGCAGAACCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGCACCCCTCAGGGCTCTaGTTGTGGGGACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GRAEPGPTELLKARKGGLHPSGL*LWGQLE
Trigger: CTCCAGCTGTCCCCACAAGCAGAGCCCTGAGGGGTG...CAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGGTTCTGCTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCCTTCCTCTTGCTCGATaGACTGCTCGATGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: CQSSLPAGPGAPELQRAPLPLAR*TARCSL
Trigger: TAAAGAGCATCGAGCAGTCCATCGAGCAAGAGGAAG...GGGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CCA 90 bp CCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGTCCCAGAGGCAAAGATaGCGGGGTTCCCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: PVQTHTHRDHAHDTGRGRSQRQR*RGSHSP
Trigger: TGGAGAGTGGGAACCCCGCCATCTTTGCCTCTGGGA...CCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GAGGGAGCCTGGAGCCATGGCAGCCTGAGCCTCCCTGGCAGTGATCAGCGACTGCCACCTGGAGTGGAGTaGCAGTTTGGGTGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: EGAWSHGSLSLPGSDQRLPPGVE*QFGWLL
Trigger: TAGAAGCCACCCAAACTGCCACTCCACTCCAGGTGG...CAGTCGCTGATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGTGTCACCCTGGCTTGGAGTGGCCCACCTaGAGTGGAGTGGCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: PGPTELLKARKGGLCHPGLEWPT*SGVAVW
Trigger: CCAAACTGCCACTCCACTCCAGGTGGGCCACTCCAA...GCCAGGGTGACACAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TGCTGCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGAGGCCCAGGACCCGATaGACTTTGCCCCTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: CCMHSHASPCLSTRERVLRPRTR*TLPLGR
Trigger: CCTGCCTAGGGGCAAAGTCCATCGGGTCCTGGGCCT...CAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGGGCCGGAGGAATGTaGGAAGGGAAGCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: EGNTDSGHSHWAGVKPREGAGGM*EGKLRP
Trigger: GGGCCTCAGCTTCCCTTCCCACATTCCTCCGGCCCC...CTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGCACGTGACACCCACGTaGCACATCGATGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: PVQTHTHRDHAHDTGRGRHVTPT*HIDGRM
Trigger: CATCCTCCCATCGATGTGCCACGTGGGTGTCACGTG...CCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp GCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGCTGCGATCTTGTCAATaGAGCCTCGAATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ALACISLPVHKGEGPGAGLRSCQ*SLESPP
Trigger: TGGAGGAGATTCGAGGCTTCATTGACAAGATCGCAG...CCCCGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCTCTTGCTCGATGGACTaGTCGATGCTCTTTAACTTG +
Preference number: 4 (lower is better)
Translates to: LSIISPCGAGGTRAPEGPSCSMD*SMLFNL
Trigger: CAAGTTAAAGAGCATCGAGCAGTCCATCGAGCAAGA...GGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR GCA 90 bp CGCTGGCTGCCTCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCACACTCACAGAGATCATaGACACGACACGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RWLPPSASSRTDAHSQRSHSQRS*TRHGAG
Trigger: CCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTG...TGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAGGCAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp TGGCTGCCGAATACTGCATCTGGGACACGTGACACCCACGTGGCACATCGATGGGTCTGCTCCTCGCTGTaGACACTGCATCACGCCCCG +
Preference number: 4 (lower is better)
Translates to: WLPNTASGTRDTHVAHRWVCSSL*TLHHAP
Trigger: CGGGGCGTGATGCAGTGTGCACAGCGAGGAGCAGAC...CCATCGATGTGCCACGTGGGTGTCACGTGTCCCAGATGCAGTATTCGGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp ATGCAACGCTGGCTTGAGGGACTGACTGCAGCCTGCTTTGCCTCCCTAGCTGCTCACGGCCCCATCCCCTaGTGCATGCACTCGCATGCA +
Preference number: 4 (lower is better)
Translates to: MQRWLEGLTAACFASLAAHGPIP*CMHSHA
Trigger: TGCATGCGAGTGCATGCAGCAGGGGATGGGGCCGTG...AGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGCGTTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TGGCTGCCGAATACTGCATCTGGGACACGTGACACCCACGTGGCACATCGATGGGCCGTGCGGAGCTCCTaGGTTCGGTCCTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: WLPNTASGTRDTHVAHRWAVRSS*VRSFML
Trigger: GAGCATGAAGGACCGAACCCAGGAGCTCCGCACGGC...CCATCGATGTGCCACGTGGGTGTCACGTGTCCCAGATGCAGTATTCGGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TGGCTGCCGAATACTGCATCTGGGACACGTGACACCCACGTGGCACATCGATGGCATCATCGCTGTCCTTaGCCGTGCGGAGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: WLPNTASGTRDTHVAHRWHHRCP*PCGAPG
Trigger: CCCAGGAGCTCCGCACGGCCAAGGACAGCGATGATG...CCATCGATGTGCCACGTGGGTGTCACGTGTCCCAGATGCAGTATTCGGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GGAAGAGCAGAACCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGCGGCGCGCCTTGCTCTaGTACTTGACGGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GRAEPGPTELLKARKGGLRRALL*YLTAFL
Trigger: CAAGAAGGCCGTCAAGTACCAGAGCAAGGCGCGCCG...CAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGGTTCTGCTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp ACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGAGGGCCCATGGCAGAGAGTGGCAGTTTGGGTaGCTTCTAGGCGAAGATGCC +
Preference number: 4 (lower is better)
Translates to: THRDHAHDTGRGRRAHGREWQFG*LLGEDA
Trigger: GGCATCTTCGCCTAGAAGCCACCCAAACTGCCACTC...TCTGCCATGGGCCCTCCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGGGGACGGAGGGCCCATaGCAGAGAAGGGAGCATGGG +
Preference number: 4 (lower is better)
Translates to: SASSRTDAHSQRSCTRHGGTEGP*QRREHG
Trigger: CCCATGCTCCCTTCTCTGCCATGGGCCCTCCGTCCC...CCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GGGTGGCTTCTAGGCGAAGATGCCCCCAACAGTGGAGGCGATGACGATGCCCAGTCAGGGCTCTGCTTGTaGGGACAGCTGGAGAGGACA +
Preference number: 4 (lower is better)
Translates to: GWLLGEDAPNSGGDDDAQSGLCL*GQLERT
Trigger: TGTCCTCTCCAGCTGTCCCCACAAGCAGAGCCCTGA...CTGGGCATCGTCATCGCCTCCACTGTTGGGGGCATCTTCGCCTAGAAGCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395156.7
CDS-3UTR CCA 90 bp CAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGACTGAGACTCAGAGCTaGGCTGTCCCTCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: QHGQWSQSLGRSKAEGGWTETQS*AVPQGH
Trigger: GTGGCCCTGAGGGACAGCCCAGCTCTGAGTCTCAGT...CCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGGTAGCCCTCCCCGGCTaGCTGCCGAATACTGCATCT +
Preference number: 4 (lower is better)
Translates to: QHGQWSQSLGRSKAEGGWVALPG*LPNTAS
Trigger: AGATGCAGTATTCGGCAGCCAGCCGGGGAGGGCTAC...CCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGTGTCACCCTGGCAGTGGTCACAGTCACTaGGCAGGAGTAAAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PGPTELLKARKGGLCHPGSGHSH*AGVKPR
Trigger: CCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACT...GCCAGGGTGACACAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGAGTGGTCACAGTCACTaGGCAGGAGTAAAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: HALACISLPVHKGEGPGASGHSH*AGVKPR
Trigger: CCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACT...CGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp ATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCTCTTTATGTCGGACATaGGTTCTTCCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ILSIISPCGAGGTRAPEGSLCRT*VLPAPP
Trigger: AGGAGGAGCTGGAAGAACTCATGTCCGACATAAAGA...GCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR TCA 90 bp CAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGGGCACACGGGCATGGCCATGTCCATaGACATGTCGTGTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: QWSQSLGRSKAEGGWGTRAWPCP*TCRVAH
Trigger: GTGAGCTACACGACATGTTCATGGACATGGCCATGC...CCGTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp CCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGTGTCACCCTGGCGCATGGCCATGTCCATaGACATGTCGTGTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: PGPTELLKARKGGLCHPGAWPCP*TCRVAH
Trigger: GTGAGCTACACGACATGTTCATGGACATGGCCATGC...GCCAGGGTGACACAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp CGCTGGCTGCCTCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCACAACAGTGGAGGCGATaGCGATGCCCAGGATCACAC +
Preference number: 4 (lower is better)
Translates to: RWLPPSASSRTDAHSQRSQQWRR*RCPGSH
Trigger: GTGTGATCCTGGGCATCGTCATCGCCTCCACTGTTG...TGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAGGCAGCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp TGCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGACCTCTCCCCTAACCTaGAAAGCAGCACCATGTGGC +
Preference number: 4 (lower is better)
Translates to: CMHSHASPCLSTRERVLGTSPLT*KAAPCG
Trigger: GCCACATGGTGCTGCTTTTCAGGTTAGGGGAGAGGT...CCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp TGGCTGCCGAATACTGCATCTGGGACACGTGACACCCACGTGGCACATCGATGGGAGCCTCCCTGGCAGTaGTCAGCGACTGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: WLPNTASGTRDTHVAHRWEPPWQ*SATETQ
Trigger: CTGAGTCTCAGTCGCTGATCACTGCCAGGGAGGCTC...CCATCGATGTGCCACGTGGGTGTCACGTGTCCCAGATGCAGTATTCGGCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp GATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCGAATCTCCTCCACCTaGTCAAAGAACTCATCCATG +
Preference number: 4 (lower is better)
Translates to: DPVNHLSLRGRGHPSSRGRISST*SKNSSM
Trigger: CATGGATGAGTTCTTTGAGCAGGTGGAGGAGATTCG...CCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR GCA 90 bp CTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGGCACATTTCCCATGAGAAGCCCTTCAGGCCTTCCTCTTaGTCGATGGACTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: LSTRERVLGRGHISHEKPFRPSS*SMDCSM
Trigger: CATCGAGCAGTCCATCGAGCAAGAGGAAGGCCTGAA...GGGCTTCTCATGGGAAATGTGCCCCCGCCCCAGGACCCTCTCCCTTGTGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp GGGGAATCGCTGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGTCTGGATGCGGCCTTTaGAGCGCTCGCGGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: GESLFKKATRTVVTVTGQSGCGL*SARGSR
Trigger: CCGACTACCGCGAGCGCTGCAAAGGCCGCATCCAGA...CTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACAGCGATTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp TGCTGCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGCTGCATGCACTCGCATaGATCTCCCTGCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: CCMHSHASPCLSTRERVLLHALA*ISLPVH
Trigger: GTGGACAGGCAGGGAGATGCATGCGAGTGCATGCAG...CAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGGGCACACGGAGTGGAGTGGCAGTTTaGGTGGCTTCTAGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: QWSQSLGRSKAEGGWGTRSGVAV*VASRRR
Trigger: TCTTCGCCTAGAAGCCACCCAAACTGCCACTCCACT...CCGTGTGCCCCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GGGGAATCGCTGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGTGGCCCACCTGGAGTaGAGTGGCAGTTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GESLFKKATRTVVTVTGQVAHLE*SGSLGG
Trigger: GCCACCCAAACTGCCACTCCACTCCAGGTGGGCCAC...CTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACAGCGATTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp ATGCAACGCTGGCTTGAGGGACTGACTGCAGCCTGCTTTGCCTCCCTAGCTGCTGCTTGTGGGGACAGCTaGAGAGGACAGGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: MQRWLEGLTAACFASLAAACGDS*RGQGRS
Trigger: TGACCTGCCCTGTCCTCTCCAGCTGTCCCCACAAGC...AGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGCGTTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGTCAGGGCTCTGCTTGTaGGGACAGCTGGAGAGGACA +
Preference number: 4 (lower is better)
Translates to: QHGQWSQSLGRSKAEGGWSGLCL*GQLERT
Trigger: TGTCCTCTCCAGCTGTCCCCACAAGCAGAGCCCTGA...CCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TGGCTGCCGAATACTGCATCTGGGACACGTGACACCCACGTGGCACATCGATGGACTGAGACTCAGAGCTaGGCTGTCCCTCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: WLPNTASGTRDTHVAHRWTETQS*AVPQGH
Trigger: GTGGCCCTGAGGGACAGCCCAGCTCTGAGTCTCAGT...CCATCGATGTGCCACGTGGGTGTCACGTGTCCCAGATGCAGTATTCGGCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCAAAGCCGAGGGAGGGTaGGGCACACGGACACGGCCC +
Preference number: 4 (lower is better)
Translates to: CSRRQHGQWSQSLGRSKAKAEGG*GTRTRP
Trigger: GGGCCGTGTCCGTGTGCCCCACCCTCCCTCGGCTTT...GGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp GGAAGAGCAGAACCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGGGTCTCGGTCCACGGTaGCAGCGACATCATCATCAT +
Preference number: 4 (lower is better)
Translates to: GRAEPGPTELLKARKGGLGLGPR*QRHHHH
Trigger: ATGATGATGATGTCGCTGTCACCGTGGACCGAGACC...CAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGGTTCTGCTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp TCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACAGGCCCACCGAGTTACTaGAGGCAAGGAAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SLCLFPYRRTLTEIMHTTGPPSY*RQGRVA
Trigger: GGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCC...TGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp TGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCCGCTGTCCTTGGCCGTaGGGAGCTCCTGGGTTCGGT +
Preference number: 4 (lower is better)
Translates to: CSRRQHGQWSQSLGRSKARCPWP*GAPGFG
Trigger: ACCGAACCCAGGAGCTCCGCACGGCCAAGGACAGCG...GGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp TGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCGGAACGAACTTTGTTTaGTGTCTTCTTTATGTCGGA +
Preference number: 4 (lower is better)
Translates to: CQSSLPAGPGAPELQRAPGTNFV*CLLYVG
Trigger: TCCGACATAAAGAAGACAGCAAACAAAGTTCGTTCC...GGGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR GCA 90 bp GAATCGCTGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTCTGGATGCGGCCTTTaGAGCGCTCGCGGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: ESLFKKATRTVVTVTGQESGCGL*SARGSR
Trigger: CCGACTACCGCGAGCGCTGCAAAGGCCGCATCCAGA...CTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACAGCGATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGATCTCGCTCAGAGCCTaGTTCGAGATGCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: QHGQWSQSLGRSKAEGGWISLRA*FEMLES
Trigger: GGACTCCAGCATCTCGAAGCAGGCTCTGAGCGAGAT...CCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CTTCTAGGCGAAGATGCCCCCAACAGTGGAGGCGATGACGATGCCCAGGATCACGGACTGACTGCAGCCTaGTTTGCCTCCCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLGEDAPNSGGDDDAQDHGLTAA*FASLAA
Trigger: AGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCC...GTGATCCTGGGCATCGTCATCGCCTCCACTGTTGGGGGCATCTTCGCCTAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395156.7
CDS-3UTR GCA 90 bp CAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGCCACCATCCCAAACATaGAACGCTGGCTTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: QHGQWSQSLGRSKAEGGWPPSQT*NAGLRD
Trigger: GTCCCTCAAGCCAGCGTTGCATGTTTGGGATGGTGG...CCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp ATGCAACGCTGGCTTGAGGGACTGACTGCAGCCTGCTTTGCCTCCCTAGCTGCTCCATCCCCTGCTGCATaGACTCGCATGCATCTCCCT +
Preference number: 4 (lower is better)
Translates to: MQRWLEGLTAACFASLAAPSPAA*TRMHLP
Trigger: AGGGAGATGCATGCGAGTGCATGCAGCAGGGGATGG...AGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGCGTTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCGATGCTCTTTAACTTaGAACGAACTTTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LSIISPCGAGGTRAPEGPRCSLT*NELCLL
Trigger: CAGCAAACAAAGTTCGTTCCAAGTTAAAGAGCATCG...GGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CCA 90 bp GAGGGAGCCTGGAGCCATGGCAGCCTGAGCCTCCCTGGCAGTGATCAGCGACTGCTTCCTCTTGCTCGATaGACTGCTCGATGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: EGAWSHGSLSLPGSDQRLLPLAR*TARCSL
Trigger: TAAAGAGCATCGAGCAGTCCATCGAGCAAGAGGAAG...CAGTCGCTGATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GACTTCCCAGAGCGCAAGACAACAGGAGCCACCATCCCAAACATGCAACGCTGGAAAAGCAGCACCATGTaGCCAGCTGGTCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: DFPERKTTGATIPNMQRWKSSTM*PAGPHP
Trigger: GGGGTGGGGACCAGCTGGCCACATGGTGCTGCTTTT...CCAGCGTTGCATGTTTGGGATGGTGGCTCCTGTTGTCTTGCGCTCTGGGAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp CCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGTCTTTATGTCGGACATaGGTTCTTCCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PVQTHTHRDHAHDTGRGRSLCRT*VLPAPP
Trigger: AGGAGGAGCTGGAAGAACTCATGTCCGACATAAAGA...CCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp ATGCAACGCTGGCTTGAGGGACTGACTGCAGCCTGCTTTGCCTCCCTAGCTGCTACCTCTCCCCTAACCTaGAAAGCAGCACCATGTGGC +
Preference number: 4 (lower is better)
Translates to: MQRWLEGLTAACFASLAATSPLT*KAAPCG
Trigger: GCCACATGGTGCTGCTTTTCAGGTTAGGGGAGAGGT...AGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGCGTTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp GGAAGAGCAGAACCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGACTGCAGGCCTGAAATaGCATCTGACTTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GRAEPGPTELLKARKGGLTAGLK*HLTSQS
Trigger: GCTCTGGGAAGTCAGATGTCATTTCAGGCCTGCAGT...CAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGGTTCTGCTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp ACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGAGGGCCCATGGCAGACGAATCTCCTCCACCTaGTCAAAGAACTCATCCATG +
Preference number: 4 (lower is better)
Translates to: THRDHAHDTGRGRRAHGRRISST*SKNSSM
Trigger: CATGGATGAGTTCTTTGAGCAGGTGGAGGAGATTCG...TCTGCCATGGGCCCTCCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp GAGGCCCAGGACCCGATGGACTTTGCCCCTAGGCAGGGGAGGGAGCCTGGAGCCGGAACGAACTTTGTTTaGTGTCTTCTTTATGTCGGA +
Preference number: 4 (lower is better)
Translates to: EAQDPMDFAPRQGREPGAGTNFV*CLLYVG
Trigger: TCCGACATAAAGAAGACAGCAAACAAAGTTCGTTCC...GGCTCCAGGCTCCCTCCCCTGCCTAGGGGCAAAGTCCATCGGGTCCTGGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp ATGCAACGCTGGCTTGAGGGACTGACTGCAGCCTGCTTTGCCTCCCTAGCTGCTATCTCGCTCAGAGCCTaGTTCGAGATGCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: MQRWLEGLTAACFASLAAISLRA*FEMLES
Trigger: GGACTCCAGCATCTCGAAGCAGGCTCTGAGCGAGAT...AGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGCGTTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp GAATCGCTGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGCACTCACAGAGATCATaGACACGACACGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: ESLFKKATRTVVTVTGQEHSQRS*TRHGAG
Trigger: CCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTG...CTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACAGCGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp ATGCAACGCTGGCTTGAGGGACTGACTGCAGCCTGCTTTGCCTCCCTAGCTGCTCCACCATCCCAAACATaGAACGCTGGCTTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: MQRWLEGLTAACFASLAAPPSQT*NAGLRD
Trigger: GTCCCTCAAGCCAGCGTTGCATGTTTGGGATGGTGG...AGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGCGTTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp TCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGTCGCATGCATCTCCCTaGCTGTCCACAAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SASSRTDAHSQRSCTRHGSHASP*LSTRER
Trigger: CCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGA...CCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CTCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACCTGCATGCACTCGCATaGATCTCCCTGCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LPLPLPVQTHTHRDHAHDLHALA*ISLPVH
Trigger: GTGGACAGGCAGGGAGATGCATGCGAGTGCATGCAG...GTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp TCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGCCATCCCCTGCTGCATaGACTCGCATGCATCTCCCT +
Preference number: 4 (lower is better)
Translates to: SASSRTDAHSQRSCTRHGPSPAA*TRMHLP
Trigger: AGGGAGATGCATGCGAGTGCATGCAGCAGGGGATGG...CCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp TGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCCACGGCCCCATCCCCTaGTGCATGCACTCGCATGCA +
Preference number: 4 (lower is better)
Translates to: CSRRQHGQWSQSLGRSKAHGPIP*CMHSHA
Trigger: TGCATGCGAGTGCATGCAGCAGGGGATGGGGCCGTG...GGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GACTTCCCAGAGCGCAAGACAACAGGAGCCACCATCCCAAACATGCAACGCTGGTGGGGGATGCCAGGATaGCACTGTGCTTCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: DFPERKTTGATIPNMQRWWGMPG*HCASAS
Trigger: TGAAGCGGAAGCACAGTGCCATCCTGGCATCCCCCA...CCAGCGTTGCATGTTTGGGATGGTGGCTCCTGTTGTCTTGCGCTCTGGGAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GACTTCCCAGAGCGCAAGACAACAGGAGCCACCATCCCAAACATGCAACGCTGGTCCCAGAGGCAAAGATaGCGGGGTTCCCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: DFPERKTTGATIPNMQRWSQRQR*RGSHSP
Trigger: TGGAGAGTGGGAACCCCGCCATCTTTGCCTCTGGGA...CCAGCGTTGCATGTTTGGGATGGTGGCTCCTGTTGTCTTGCGCTCTGGGAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CTCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACAGGCAACACGGACAGTaGTCACAGTCACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPLPLPVQTHTHRDHAHDRQHGQ*SQSLGR
Trigger: CCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCT...GTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp GGGTGGCTTCTAGGCGAAGATGCCCCCAACAGTGGAGGCGATGACGATGCCCAGTCTTTATGTCGGACATaGGTTCTTCCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GWLLGEDAPNSGGDDDAQSLCRT*VLPAPP
Trigger: AGGAGGAGCTGGAAGAACTCATGTCCGACATAAAGA...CTGGGCATCGTCATCGCCTCCACTGTTGGGGGCATCTTCGCCTAGAAGCCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395156.7
CDS-3UTR GCA 90 bp TGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGCCAGGATGGCACTGTaGTTCCGCTTCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CSRRQHGQWSQSLGRSKAARMAL*FRFTSS
Trigger: GGAGGAGGTGAAGCGGAAGCACAGTGCCATCCTGGC...GGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp ACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGAGGGCCCATGGCAGATCTTGCTCGATGGACTaGTCGATGCTCTTTAACTTG +
Preference number: 4 (lower is better)
Translates to: THRDHAHDTGRGRRAHGRSCSMD*SMLFNL
Trigger: CAAGTTAAAGAGCATCGAGCAGTCCATCGAGCAAGA...TCTGCCATGGGCCCTCCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp GAATCGCTGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGGCTTCTAGGCGAAGATaGCCCCAACAGTGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: ESLFKKATRTVVTVTGQEASRRR*PQQWRR
Trigger: TCGCCTCCACTGTTGGGGGCATCTTCGCCTAGAAGC...CTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACAGCGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp TCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACATCGCATGCATCTCCCTaGCTGTCCACAAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SLCLFPYRRTLTEIMHTTSHASP*LSTRER
Trigger: CCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGA...TGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACATGGGGGATGCCAGGATaGCACTGTGCTTCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: SLCLFPYRRTLTEIMHTTWGMPG*HCASAS
Trigger: TGAAGCGGAAGCACAGTGCCATCCTGGCATCCCCCA...TGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGCCTCCACAAACTTTCTaGACAGCGTGGAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: EGNTDSGHSHWAGVKPREPPQTF*TAWSAV
Trigger: CACAGCACTCCACGCTGTCCAGAAAGTTTGTGGAGG...CTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TGGCTGCCGAATACTGCATCTGGGACACGTGACACCCACGTGGCACATCGATGGACATCGATGGGAGGATaGCAAGGGCAGGATGAGACT +
Preference number: 4 (lower is better)
Translates to: WLPNTASGTRDTHVAHRWTSMGG*QGQDET
Trigger: AGTCTCATCCTGCCCTTGCCATCCTCCCATCGATGT...CCATCGATGTGCCACGTGGGTGTCACGTGTCCCAGATGCAGTATTCGGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GAATCGCTGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGCACGTGACACCCACGTaGCACATCGATGGGAGGATG +
Preference number: 4 (lower is better)
Translates to: ESLFKKATRTVVTVTGQEHVTPT*HIDGRM
Trigger: CATCCTCCCATCGATGTGCCACGTGGGTGTCACGTG...CTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACAGCGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp TCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACAGGTCTCGGTCCACGGTaGCAGCGACATCATCATCAT +
Preference number: 4 (lower is better)
Translates to: SLCLFPYRRTLTEIMHTTGLGPR*QRHHHH
Trigger: ATGATGATGATGTCGCTGTCACCGTGGACCGAGACC...TGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp GAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGCTCCTCCACGTTCTCTaGGATCTTGTCAATGAAGCC +
Preference number: 4 (lower is better)
Translates to: EGNTDSGHSHWAGVKPRELLHVL*DLVNEA
Trigger: GGCTTCATTGACAAGATCGCAGAGAACGTGGAGGAG...CTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp TGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGGACTGACTGCAGCCTaGTTTGCCTCCCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CSRRQHGQWSQSLGRSKAGLTAA*FASLAA
Trigger: AGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCC...GGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GAGGGAGCCTGGAGCCATGGCAGCCTGAGCCTCCCTGGCAGTGATCAGCGACTGCGATGCTCTTTAACTTaGAACGAACTTTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: EGAWSHGSLSLPGSDQRLRCSLT*NELCLL
Trigger: CAGCAAACAAAGTTCGTTCCAAGTTAAAGAGCATCG...CAGTCGCTGATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GGAAGAGCAGAACCTGGGCCCACCGAGTTACTGAAGGCAAGGAAGGGTGGCCTGCTTCCTCTTGCTCGATaGACTGCTCGATGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: GRAEPGPTELLKARKGGLLPLAR*TARCSL
Trigger: TAAAGAGCATCGAGCAGTCCATCGAGCAAGAGGAAG...CAGGCCACCCTTCCTTGCCTTCAGTAACTCGGTGGGCCCAGGTTCTGCTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GACTTCCCAGAGCGCAAGACAACAGGAGCCACCATCCCAAACATGCAACGCTGGACTTTCTGGACAGCGTaGAGTGCTGTGTCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: DFPERKTTGATIPNMQRWTFWTA*SAVSSG
Trigger: TCCGGAAGACACAGCACTCCACGCTGTCCAGAAAGT...CCAGCGTTGCATGTTTGGGATGGTGGCTCCTGTTGTCTTGCGCTCTGGGAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGACTTTCTGGACAGCGTaGAGTGCTGTGTCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: SASSRTDAHSQRSCTRHGTFWTA*SAVSSG
Trigger: TCCGGAAGACACAGCACTCCACGCTGTCCAGAAAGT...CCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGCCTCCACAAACTTTCTaGACAGCGTGGAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SASSRTDAHSQRSCTRHGPPQTF*TAWSAV
Trigger: CACAGCACTCCACGCTGTCCAGAAAGTTTGTGGAGG...CCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACACCACCTGGAGTGGAGTaGCAGTTTGGGTGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: SLCLFPYRRTLTEIMHTTPPGVE*QFGWLL
Trigger: TAGAAGCCACCCAAACTGCCACTCCACTCCAGGTGG...TGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACAGGGAAGAGCAGAACCTaGGCCCACCGAGTTACTGAA +
Preference number: 4 (lower is better)
Translates to: SLCLFPYRRTLTEIMHTTGKSRT*AHRVTE
Trigger: TTCAGTAACTCGGTGGGCCCAGGTTCTGCTCTTCCC...TGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCAGGCAACACGGACAGTaGTCACAGTCACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CSRRQHGQWSQSLGRSKARQHGQ*SQSLGR
Trigger: CCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCT...GGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CGCTGGCTGCCTCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATCTTGCTCGATGGACTaGTCGATGCTCTTTAACTTG +
Preference number: 4 (lower is better)
Translates to: RWLPPSASSRTDAHSQRSSCSMD*SMLFNL
Trigger: CAAGTTAAAGAGCATCGAGCAGTCCATCGAGCAAGA...TGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAGGCAGCCAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp CTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGGCACATTTCCCATGAGAAGCCCCGATGCTCTTTAACTTaGAACGAACTTTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LSTRERVLGRGHISHEKPRCSLT*NELCLL
Trigger: CAGCAAACAAAGTTCGTTCCAAGTTAAAGAGCATCG...GGGCTTCTCATGGGAAATGTGCCCCCGCCCCAGGACCCTCTCCCTTGTGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGGGAAGAGCAGAACCTaGGCCCACCGAGTTACTGAA +
Preference number: 4 (lower is better)
Translates to: CSRRQHGQWSQSLGRSKAGKSRT*AHRVTE
Trigger: TTCAGTAACTCGGTGGGCCCAGGTTCTGCTCTTCCC...GGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACACCAAACATGCAACGCTaGCTTGAGGGACTGACTGCA +
Preference number: 4 (lower is better)
Translates to: SLCLFPYRRTLTEIMHTTPNMQR*LEGLTA
Trigger: TGCAGTCAGTCCCTCAAGCCAGCGTTGCATGTTTGG...TGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GAATCGCTGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGACATCGATGGGAGGATaGCAAGGGCAGGATGAGACT +
Preference number: 4 (lower is better)
Translates to: ESLFKKATRTVVTVTGQETSMGG*QGQDET
Trigger: AGTCTCATCCTGCCCTTGCCATCCTCCCATCGATGT...CTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACAGCGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp TCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGCGAATCTCCTCCACCTaGTCAAAGAACTCATCCATG +
Preference number: 4 (lower is better)
Translates to: SASSRTDAHSQRSCTRHGRISST*SKNSSM
Trigger: CATGGATGAGTTCTTTGAGCAGGTGGAGGAGATTCG...CCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp TCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACACTCCTCCACGTTCTCTaGGATCTTGTCAATGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLCLFPYRRTLTEIMHTTLLHVL*DLVNEA
Trigger: GGCTTCATTGACAAGATCGCAGAGAACGTGGAGGAG...TGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCAGTGGAGTGGCAGTTTaGGTGGCTTCTAGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: CSRRQHGQWSQSLGRSKASGVAV*VASRRR
Trigger: TCTTCGCCTAGAAGCCACCCAAACTGCCACTCCACT...GGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCCCAAACATGCAACGCTaGCTTGAGGGACTGACTGCA +
Preference number: 4 (lower is better)
Translates to: CSRRQHGQWSQSLGRSKAPNMQR*LEGLTA
Trigger: TGCAGTCAGTCCCTCAAGCCAGCGTTGCATGTTTGG...GGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp CTTCTAGGCGAAGATGCCCCCAACAGTGGAGGCGATGACGATGCCCAGGATCACGGAACGAACTTTGTTTaGTGTCTTCTTTATGTCGGA +
Preference number: 4 (lower is better)
Translates to: LLGEDAPNSGGDDDAQDHGTNFV*CLLYVG
Trigger: TCCGACATAAAGAAGACAGCAAACAAAGTTCGTTCC...GTGATCCTGGGCATCGTCATCGCCTCCACTGTTGGGGGCATCTTCGCCTAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395156.7
CDS-3UTR CCA 90 bp ATAAAAATTTCACAAAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGCCAAGGGGTTGCTCCTaGGGCCGGAGGAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: IKISQNGQLVVPRPLVKGPRGCS*GRRNVG
Trigger: TCCCACATTCCTCCGGCCCCAGGAGCAACCCCTTGG...CCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTTTGTGAAATTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp TGCTGCATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGAAAAATTTCACAAAATaGGCAGCTGGTTGTACCAAG +
Preference number: 4 (lower is better)
Translates to: CCMHSHASPCLSTRERVLKNFTK*AAGCTK
Trigger: CTTGGTACAACCAGCTGCCCATTTTGTGAAATTTTT...CAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATGCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR TCA 90 bp ATAAAAATTTCACAAAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGGAGCCTCCCTGGCAGTaGTCAGCGACTGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: IKISQNGQLVVPRPLVKGEPPWQ*SATETQ
Trigger: CTGAGTCTCAGTCGCTGATCACTGCCAGGGAGGCTC...CCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTTTGTGAAATTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp ATAAAAATTTCACAAAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGGCCAGGATGGCACTGTaGTTCCGCTTCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IKISQNGQLVVPRPLVKGARMAL*FRFTSS
Trigger: GGAGGAGGTGAAGCGGAAGCACAGTGCCATCCTGGC...CCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTTTGTGAAATTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CCA 90 bp GGGGAATCGCTGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGAAAAATTTCACAAAATaGGCAGCTGGTTGTACCAAG +
Preference number: 4 (lower is better)
Translates to: GESLFKKATRTVVTVTGQKNFTK*AAGCTK
Trigger: CTTGGTACAACCAGCTGCCCATTTTGTGAAATTTTT...CTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACAGCGATTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR GCA 90 bp ATAAAAATTTCACAAAATGGGCAGCTGGTTGTACCAAGACCTTTGGTGAAGGGGTTCAGGCCTTCCTCTTaGTCGATGGACTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: IKISQNGQLVVPRPLVKGFRPSS*SMDCSM
Trigger: CATCGAGCAGTCCATCGAGCAAGAGGAAGGCCTGAA...CCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCCATTTTGTGAAATTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CAA 90 bp TGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCCCTGAGGCTGAGAACTaGGTCCCTCCCCGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: CQSSLPAGPGAPELQRAPPEAEN*VPPRQG
Trigger: GCCCTGCCGGGGAGGGACCAAGTTCTCAGCCTCAGG...GGGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACA
71% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS GCA 90 bp AGGTGCAGGGGTCAGGCCCTGCGGGGACCGACCCAGAGACTCAGGTaGCCGCCCATCCTAGACTCCGTGGCCGCACCTGTGTCTTCCGGA +
Preference number: 5 (lower is better)
Translates to: RCRGQALRGPTQRLR*PPILDSVAAPVSSG
Trigger: TCCGGAAGACACAGGTGCGGCCACGGAGTCTAGGATGGGCGGGCACCTGAGTCTCTGGGTCGGTCCCCGCAGGGCCTGACCCCTGCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462135.1
ENST00000491427.5
CDS-3UTR CAA 90 bp TGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCTCATCATCGCTGTCCTaGGCCGTGCGGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: CQSSLPAGPGAPELQRAPSSSLS*AVRSSW
Trigger: CCAGGAGCTCCGCACGGCCAAGGACAGCGATGATGA...GGGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CAA 90 bp GAGGCCCAGGACCCGATGGACTTTGCCCCTAGGCAGGGGAGGGAGCCTGGAGCCAGGACCCGATGGACTTaGCCCCTAGGCAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: EAQDPMDFAPRQGREPGARTRWT*PLGRGG
Trigger: CCCTCCCCTGCCTAGGGGCAAAGTCCATCGGGTCCT...GGCTCCAGGCTCCCTCCCCTGCCTAGGGGCAAAGTCCATCGGGTCCTGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CAA 90 bp CTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCTCGGACTGCGTGGCGTaGTACTCCGACATGACCTCC +
Preference number: 5 (lower is better)
Translates to: LSIISPCGAGGTRAPEGPSDCVA*YSDMTS
Trigger: GGAGGTCATGTCGGAGTACAACGCCACGCAGTCCGA...GGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CAA 90 bp GCACACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGAGGGCCCATGGGCAGCCAGGGCCTCCTaGGAGTGGCCCACCTGGAGT +
Preference number: 5 (lower is better)
Translates to: AHSQRSCTRHGAGTEGPWAARAS*EWPTWS
Trigger: ACTCCAGGTGGGCCACTCCAAGGAGGCCCTGGCTGC...CCATGGGCCCTCCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CAA 90 bp GGTCTGCTCCTCGCTGTGCACACTGCATCACGCCCCGCTGGCTGCCTCCCTCTGTCATCATCGCTGTCCTaGGCCGTGCGGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GLLLAVHTASRPAGCLPLSSSLS*AVRSSW
Trigger: CCAGGAGCTCCGCACGGCCAAGGACAGCGATGATGA...CAGAGGGAGGCAGCCAGCGGGGCGTGATGCAGTGTGCACAGCGAGGAGCAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CAA 90 bp CTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGGCACATTTCCCATGAGAAGCCCGCAGCCAGGGCCTCCTaGGAGTGGCCCACCTGGAGT +
Preference number: 5 (lower is better)
Translates to: LSTRERVLGRGHISHEKPAARAS*EWPTWS
Trigger: ACTCCAGGTGGGCCACTCCAAGGAGGCCCTGGCTGC...GGGCTTCTCATGGGAAATGTGCCCCCGCCCCAGGACCCTCTCCCTTGTGGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS CCA 90 bp CTTCGGGTCGGCAGGGCCCTGGCGGCAGTTTCAACAGCGGGTGATTaGTTACCTGAGAACTTGGTCCCTCCCCGGCAGGGCAGCGTGTCG +
Preference number: 5 (lower is better)
Translates to: LRVGRALAAVSTAGD*LPENLVPPRQGSVS
Trigger: CGACACGCTGCCCTGCCGGGGAGGGACCAAGTTCTCAGGTAACCAATCACCCGCTGTTGAAACTGCCGCCAGGGCCCTGCCGACCCGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461441.5
CDS-3UTR CAA 90 bp ATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCGTCTTCTCATCGGGGTaGGGGGATGCCAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: ILSIISPCGAGGTRAPEGVFSSG*GDARMA
Trigger: TGCCATCCTGGCATCCCCCAACCCCGATGAGAAGAC...GCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CAA 90 bp TGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCCGTTCAGGCCTTCCTCTaGCTCGATGGACTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: CQSSLPAGPGAPELQRAPVQAFL*LDGLLD
Trigger: ATCGAGCAGTCCATCGAGCAAGAGGAAGGCCTGAAC...GGGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CAA 90 bp ATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCTACTTGACGGCCTTCTaGGTGTCAGACACGGCCCTC +
Preference number: 5 (lower is better)
Translates to: ILSIISPCGAGGTRAPEGYLTAF*VSDTAL
Trigger: GAGGGCCGTGTCTGACACCAAGAAGGCCGTCAAGTA...GCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CAA 90 bp GGTCTGCTCCTCGCTGTGCACACTGCATCACGCCCCGCTGGCTGCCTCCCTCTGGTTCAGGCCTTCCTCTaGCTCGATGGACTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: GLLLAVHTASRPAGCLPLVQAFL*LDGLLD
Trigger: ATCGAGCAGTCCATCGAGCAAGAGGAAGGCCTGAAC...CAGAGGGAGGCAGCCAGCGGGGCGTGATGCAGTGTGCACAGCGAGGAGCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CAA 90 bp CTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCACCGCGTGTTCCACATaGTACTCGATCCTGTCAATC +
Preference number: 5 (lower is better)
Translates to: LSIISPCGAGGTRAPEGPTACST*YSILSI
Trigger: GATTGACAGGATCGAGTACAATGTGGAACACGCGGT...GGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CAA 90 bp GGGTGGCTTCTAGGCGAAGATGCCCCCAACAGTGGAGGCGATGACGATGCCCAGGTCTTCTCATCGGGGTaGGGGGATGCCAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: GWLLGEDAPNSGGDDDAQVFSSG*GDARMA
Trigger: TGCCATCCTGGCATCCCCCAACCCCGATGAGAAGAC...CTGGGCATCGTCATCGCCTCCACTGTTGGGGGCATCTTCGCCTAGAAGCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395156.7
CDS-3UTR CAA 90 bp GATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGATGCTGTTCTCCAGCTaGATGATCTCACTGTGCCGC +
Preference number: 5 (lower is better)
Translates to: DPVNHLSLRGRGHPSSRGMLFSS*MISLCR
Trigger: GCGGCACAGTGAGATCATCAAGCTGGAGAACAGCAT...CCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CAA 90 bp CCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGGCGGGGACGGTACTTGACGGCCTTCTaGGTGTCAGACACGGCCCTC +
Preference number: 5 (lower is better)
Translates to: PVQTHTHRDHAHDTGRGRYLTAF*VSDTAL
Trigger: GAGGGCCGTGTCTGACACCAAGAAGGCCGTCAAGTA...CCGTCCCCGCCCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS CCA 90 bp GGAGCGGTTCAGGCCTTCCTCTTGCTCGATGGACTGCTCGATGCCTaGGGGCACAGGTGGCTGCTAAGTCATAACCAGGCCCCTTCAACC +
Preference number: 5 (lower is better)
Translates to: GAVQAFLLLDGLLDA*GHRWLLSHNQAPST
Trigger: GGTTGAAGGGGCCTGGTTATGACTTAGCAGCCACCTGTGCCCCCAGGCATCGAGCAGTCCATCGAGCAAGAGGAAGGCCTGAACCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491427.5
CDS-3UTR CAA 90 bp GAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGTCATCATCGCTGTCCTaGGCCGTGCGGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: EGNTDSGHSHWAGVKPRESSSLS*AVRSSW
Trigger: CCAGGAGCTCCGCACGGCCAAGGACAGCGATGATGA...CTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CAA 90 bp CTGTCCACAAGGGAGAGGGTCCTGGGGCGGGGGCACATTTCCCATGAGAAGCCCGTTCAGGCCTTCCTCTaGCTCGATGGACTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: LSTRERVLGRGHISHEKPVQAFL*LDGLLD
Trigger: ATCGAGCAGTCCATCGAGCAAGAGGAAGGCCTGAAC...GGGCTTCTCATGGGAAATGTGCCCCCGCCCCAGGACCCTCTCCCTTGTGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CAA 90 bp GAGGGAGCCTGGAGCCATGGCAGCCTGAGCCTCCCTGGCAGTGATCAGCGACTGATGCTGTTCTCCAGCTaGATGATCTCACTGTGCCGC +
Preference number: 5 (lower is better)
Translates to: EGAWSHGSLSLPGSDQRLMLFSS*MISLCR
Trigger: GCGGCACAGTGAGATCATCAAGCTGGAGAACAGCAT...CAGTCGCTGATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CAA 90 bp GGTCTGCTCCTCGCTGTGCACACTGCATCACGCCCCGCTGGCTGCCTCCCTCTGACCGCGTGTTCCACATaGTACTCGATCCTGTCAATC +
Preference number: 5 (lower is better)
Translates to: GLLLAVHTASRPAGCLPLTACST*YSILSI
Trigger: GATTGACAGGATCGAGTACAATGTGGAACACGCGGT...CAGAGGGAGGCAGCCAGCGGGGCGTGATGCAGTGTGCACAGCGAGGAGCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222812.8
CDS-3UTR CAA 90 bp CTTCTAGGCGAAGATGCCCCCAACAGTGGAGGCGATGACGATGCCCAGGATCACTTCTTCCGGCGCGCCTaGCTCTGGTACTTGACGGCC +
Preference number: 5 (lower is better)
Translates to: LLGEDAPNSGGDDDAQDHFFRRA*LWYLTA
Trigger: GGCCGTCAAGTACCAGAGCAAGGCGCGCCGGAAGAA...GTGATCCTGGGCATCGTCATCGCCTCCACTGTTGGGGGCATCTTCGCCTAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395156.7
CDS CCA 90 bp CCAGCTCCTCCTTCGTCTTCTCATCGGGGTTGGGGGATGCCAGGATaGCACTGTGCTTCCGCTTCACCTCCTCCACGTTCTCTGCGATCT +
Preference number: 5 (lower is better)
Translates to: PAPPSSSHRGWGMPG*HCASASPPPRSLRS
Trigger: AGATCGCAGAGAACGTGGAGGAGGTGAAGCGGAAGCACAGTGCCATCCTGGCATCCCCCAACCCCGATGAGAAGACGAAGGAGGAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222812.8
ENST00000395154.7
ENST00000395155.3
ENST00000395156.7
ENST00000462135.1
ENST00000470878.5
CDS-3UTR CAA 90 bp GATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGACGTTCTCTGCGATCTaGTCAATGAAGCCTCGAATC +
Preference number: 5 (lower is better)
Translates to: DPVNHLSLRGRGHPSSRGTFSAI*SMKPRI
Trigger: GATTCGAGGCTTCATTGACAAGATCGCAGAGAACGT...CCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CAA 90 bp GAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGTCTTCTCATCGGGGTaGGGGGATGCCAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: EGNTDSGHSHWAGVKPREVFSSG*GDARMA
Trigger: TGCCATCCTGGCATCCCCCAACCCCGATGAGAAGAC...CTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CAA 90 bp GACTTCCCAGAGCGCAAGACAACAGGAGCCACCATCCCAAACATGCAACGCTGGTTCTTCCGGCGCGCCTaGCTCTGGTACTTGACGGCC +
Preference number: 5 (lower is better)
Translates to: DFPERKTTGATIPNMQRWFFRRA*LWYLTA
Trigger: GGCCGTCAAGTACCAGAGCAAGGCGCGCCGGAAGAA...CCAGCGTTGCATGTTTGGGATGGTGGCTCCTGTTGTCTTGCGCTCTGGGAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS CCA 90 bp CTTCTTTATGTCGGACATGAGTTCTTCCAGCTCCTCCTTCGTCTCTaGGGAGGTAGAAAGGGTGGGGGTAGGCCTCCTAGGCTCCGCGGG +
Preference number: 5 (lower is better)
Translates to: LLYVGHEFFQLLLRL*GGRKGGGRPPRLRG
Trigger: CCCGCGGAGCCTAGGAGGCCTACCCCCACCCTTTCTACCTCCCCAGAGACGAAGGAGGAGCTGGAAGAACTCATGTCCGACATAAAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494245.1
CDS-3UTR CAA 90 bp CTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGCCCCTCGATGCTCTTTAACTaGGAACGAACTTTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: LSIISPCGAGGTRAPEGPSMLFN*ERTLFA
Trigger: AGCAAACAAAGTTCGTTCCAAGTTAAAGAGCATCGA...GGGGCCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CAA 90 bp TCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGTCGGACTGCGTGGCGTaGTACTCCGACATGACCTCC +
Preference number: 5 (lower is better)
Translates to: SASSRTDAHSQRSCTRHGSDCVA*YSDMTS
Trigger: GGAGGTCATGTCGGAGTACAACGCCACGCAGTCCGA...CCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CAA 90 bp CTCCCTCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACTCGGACTGCGTGGCGTaGTACTCCGACATGACCTCC +
Preference number: 5 (lower is better)
Translates to: LPLPLPVQTHTHRDHAHDSDCVA*YSDMTS
Trigger: GGAGGTCATGTCGGAGTACAACGCCACGCAGTCCGA...GTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS GCA 90 bp ATTGTGCTGCTCCAACTCTCCCTCCTTGCTACGTCTTCAGCCTCCTaGAACAGGTCCCATGTGTCTGTCCCACATGACCGTGCGGAGCTC +
Preference number: 5 (lower is better)
Translates to: IVLLQLSLLATSSAS*NRSHVSVPHDRAEL
Trigger: GAGCTCCGCACGGTCATGTGGGACAGACACATGGGACCTGTTGCAGGAGGCTGAAGACGTAGCAAGGAGGGAGAGTTGGAGCAGCACAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470878.5
CDS-3UTR CAA 90 bp CATGCACTCGCATGCATCTCCCTGCCTGTCCACAAGGGAGAGGGTCCTGGGGCGACGTTCTCTGCGATCTaGTCAATGAAGCCTCGAATC +
Preference number: 5 (lower is better)
Translates to: HALACISLPVHKGEGPGATFSAI*SMKPRI
Trigger: GATTCGAGGCTTCATTGACAAGATCGCAGAGAACGT...CGCCCCAGGACCCTCTCCCTTGTGGACAGGCAGGGAGATGCATGCGAGTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CAA 90 bp GATCCTGTCAATCATCTCTCCCTGCGGGGCCGGGGGCACCCGAGCTCCAGAGGGTGGAACGAACTTTGTTaGCTGTCTTCTTTATGTCGG +
Preference number: 5 (lower is better)
Translates to: DPVNHLSLRGRGHPSSRGWNELC*LSSLCR
Trigger: CCGACATAAAGAAGACAGCAAACAAAGTTCGTTCCA...CCCTCTGGAGCTCGGGTGCCCCCGGCCCCGCAGGGAGAGATGATTGACAGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395154.7
CDS-3UTR CAA 90 bp ATGCAACGCTGGCTTGAGGGACTGACTGCAGCCTGCTTTGCCTCCCTAGCTGCTATGCTGTTCTCCAGCTaGATGATCTCACTGTGCCGC +
Preference number: 5 (lower is better)
Translates to: MQRWLEGLTAACFASLAAMLFSS*MISLCR
Trigger: GCGGCACAGTGAGATCATCAAGCTGGAGAACAGCAT...AGCAGCTAGGGAGGCAAAGCAGGCTGCAGTCAGTCCCTCAAGCCAGCGTTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CAA 90 bp GAATCGCTGTTCAAGAAGGCAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTACTTGACGGCCTTCTaGGTGTCAGACACGGCCCTC +
Preference number: 5 (lower is better)
Translates to: ESLFKKATRTVVTVTGQEYLTAF*VSDTAL
Trigger: GAGGGCCGTGTCTGACACCAAGAAGGCCGTCAAGTA...CTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTGCCTTCTTGAACAGCGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CAA 90 bp GAGGGAGCCTGGAGCCATGGCAGCCTGAGCCTCCCTGGCAGTGATCAGCGACTGTCGATGCTCTTTAACTaGGAACGAACTTTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: EGAWSHGSLSLPGSDQRLSMLFN*ERTLFA
Trigger: AGCAAACAAAGTTCGTTCCAAGTTAAAGAGCATCGA...CAGTCGCTGATCACTGCCAGGGAGGCTCAGGCTGCCATGGCTCCAGGCTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS GCA 90 bp TTCCGGATCCTCAGGTCAGCGGAGGAGCGGTTCAGGCCTTCCTCTTaGTCGATGGACTGCTCGATGCTCTTTAACTTGGAACGAACTTTG +
Preference number: 5 (lower is better)
Translates to: FRILRSAEERFRPSS*SMDCSMLFNLERTL
Trigger: CAAAGTTCGTTCCAAGTTAAAGAGCATCGAGCAGTCCATCGAGCAAGAGGAAGGCCTGAACCGCTCCTCCGCTGACCTGAGGATCCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222812.8
ENST00000395154.7
ENST00000395155.3
ENST00000395156.7
ENST00000462135.1
ENST00000470878.5
ENST00000494245.1
ENST00000496216.5
CDS-3UTR CAA 90 bp CAACACGGACAGTGGTCACAGTCACTGGGCAGGAGTAAAGCCGAGGGAGGGTGGTGGAACGAACTTTGTTaGCTGTCTTCTTTATGTCGG +
Preference number: 5 (lower is better)
Translates to: QHGQWSQSLGRSKAEGGWWNELC*LSSLCR
Trigger: CCGACATAAAGAAGACAGCAAACAAAGTTCGTTCCA...CCACCCTCCCTCGGCTTTACTCCTGCCCAGTGACTGTGACCACTGTCCGTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS-3UTR CAA 90 bp GACTTCCCAGAGCGCAAGACAACAGGAGCCACCATCCCAAACATGCAACGCTGGTGGAACGAACTTTGTTaGCTGTCTTCTTTATGTCGG +
Preference number: 5 (lower is better)
Translates to: DFPERKTTGATIPNMQRWWNELC*LSSLCR
Trigger: CCGACATAAAGAAGACAGCAAACAAAGTTCGTTCCA...CCAGCGTTGCATGTTTGGGATGGTGGCTCCTGTTGTCTTGCGCTCTGGGAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS TCA 90 bp TTAACTTGGAACGAACTTTGTTTGCTGTCTTCTTTATGTCGGACATaGGTTCTTCCAGCTCCTCCTTCGTCTCTGGCGGGCGGAAGAGGG +
Preference number: 5 (lower is better)
Translates to: LTWNELCLLSSLCRT*VLPAPPSSLAGGRG
Trigger: CCCTCTTCCGCCCGCCAGAGACGAAGGAGGAGCTGGAAGAACTCATGTCCGACATAAAGAAGACAGCAAACAAAGTTCGTTCCAAGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496216.5
CDS-3UTR CAA 90 bp TCTGCCTCTTCCCGTACAGACGCACACTCACAGAGATCATGCACACGACACGGGTCGATGCTCTTTAACTaGGAACGAACTTTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: SASSRTDAHSQRSCTRHGSMLFN*ERTLFA
Trigger: AGCAAACAAAGTTCGTTCCAAGTTAAAGAGCATCGA...CCCGTGTCGTGTGCATGATCTCTGTGAGTGTGCGTCTGTACGGGAAGAGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222812.8
ENST00000395156.7
CDS TCA 90 bp TTAACTTGGAACGAACTTTGTTTGCTGTCTTCTTTATGTCGGACATaGGTTCTTCCAGCTCCTCCTTCGTCTTCTCATCGGGGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: LTWNELCLLSSLCRT*VLPAPPSSSHRGWG
Trigger: CCCCCAACCCCGATGAGAAGACGAAGGAGGAGCTGGAAGAACTCATGTCCGACATAAAGAAGACAGCAAACAAAGTTCGTTCCAAGTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222812.8
ENST00000395154.7
ENST00000395155.3
ENST00000395156.7
ENST00000462135.1
ENST00000470878.5
CDS GCA 72 bp GGTCAGGCCCTGCGGGGACCGACCCAGAGACTCAGGTaGCCGCCCATCCTAGACTCCGTGGCCGCACCTGTG +
Preference number: 6 (lower is better)
Translates to: GQALRGPTQRLR*PPILDSVAAPV
Trigger: CACAGGTGCGGCCACGGAGTCTAGGATGGGCGGGCACCTGAGTCTCTGGGTCGGTCCCCGCAGGGCCTGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462135.1
ENST00000491427.5
CDS TCA 72 bp GGAAGAGGGCAAGGGGTGGATGGCCTGGGTGGGCGCTaGTGTGGGCCCTCAGGTCCAAAGAGGTGGGCACAG +
Preference number: 6 (lower is better)
Translates to: GRGQGVDGLGGR*CGPSGPKRWAQ
Trigger: CTGTGCCCACCTCTTTGGACCTGAGGGCCCACATCAGCGCCCACCCAGGCCATCCACCCCTTGCCCTCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496216.5
CDS GCA 72 bp CCAGCATGTCCTCCAGCTCCTCACTGGTCGTGGTCCTaGCGGCTGCAAGCGAGTGGGGTCACACTGAGCCCA +
Preference number: 6 (lower is better)
Translates to: PACPPAPHWSWS*RLQASGVTLSP
Trigger: TGGGCTCAGTGTGACCCCACTCGCTTGCAGCCGGCAGGACCACGACCAGTGAGGAGCTGGAGGACATGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497980.5
CDS CCA 72 bp GGCAGGGCCCTGGCGGCAGTTTCAACAGCGGGTGATTaGTTACCTGAGAACTTGGTCCCTCCCCGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: GRALAAVSTAGD*LPENLVPPRQG
Trigger: GCCCTGCCGGGGAGGGACCAAGTTCTCAGGTAACCAATCACCCGCTGTTGAAACTGCCGCCAGGGCCCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461441.5
CDS CCA 72 bp TCCTCACTGGTCGTGGTCCTGCCGGCTGCAAGCGAGTaGGGTCACACTGAGCCCAGCCCTCTTCGGGGAGTT +
Preference number: 6 (lower is better)
Translates to: SSLVVVLPAASE*GHTEPSPLRGV
Trigger: AACTCCCCGAAGAGGGCTGGGCTCAGTGTGACCCCACTCGCTTGCAGCCGGCAGGACCACGACCAGTGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497980.5
CDS CAA 72 bp CCTCAGGTCAGCGGAGGAGCGGTTCAGGCCTTCCTCTaGCTCGATGGACTGCTCGATGCCTGGGGGCACAGG +
Preference number: 6 (lower is better)
Translates to: PQVSGGAVQAFL*LDGLLDAWGHR
Trigger: CCTGTGCCCCCAGGCATCGAGCAGTCCATCGAGCAAGAGGAAGGCCTGAACCGCTCCTCCGCTGACCTGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491427.5
CDS GCA 72 bp CTCAGGTCAGCGGAGGAGCGGTTCAGGCCTTCCTCTTaGTCGATGGACTGCTCGATGCCTGGGGGCACAGGT +
Preference number: 6 (lower is better)
Translates to: LRSAEERFRPSS*SMDCSMPGGTG
Trigger: ACCTGTGCCCCCAGGCATCGAGCAGTCCATCGAGCAAGAGGAAGGCCTGAACCGCTCCTCCGCTGACCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491427.5
CDS CAA 90 bp CTTCCGGATCCTCAGGTCAGCGGAGGAGCGGTTCAGGCCTTCCTCTaGCTCGATGGACTGCTCGATGCCTGGGGGCACAGGTGGCTGCTA +
Preference number: 6 (lower is better)
Translates to: LPDPQVSGGAVQAFL*LDGLLDAWGHRWLL
Trigger: TAGCAGCCACCTGTGCCCCCAGGCATCGAGCAGTCCATCGAGCAAGAGGAAGGCCTGAACCGCTCCTCCGCTGACCTGAGGATCCGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491427.5
CDS GCA 72 bp GACATGACCTCCACAAACTTTCTGGACAGCGTGGAGTaGTGGGGGCCCGAGATGGAGGTGCAGGGGTCAGGC +
Preference number: 6 (lower is better)
Translates to: DMTSTNFLDSVE*WGPEMEVQGSG
Trigger: GCCTGACCCCTGCACCTCCATCTCGGGCCCCCAGCACTCCACGCTGTCCAGAAAGTTTGTGGAGGTCATGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462135.1
ENST00000491427.5
CDS CCA 72 bp ATGCAGAGGACAGGGACCTTCGGGTCGGCAGGGCCCTaGCGGCAGTTTCAACAGCGGGTGATTGGTTACCTG +
Preference number: 6 (lower is better)
Translates to: MQRTGTFGSAGP*RQFQQRVIGYL
Trigger: CAGGTAACCAATCACCCGCTGTTGAAACTGCCGCCAGGGCCCTGCCGACCCGAAGGTCCCTGTCCTCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461441.5
CDS CCA 72 bp CCTTCGTCTTCTCATCGGGGTTGGGGGATGCCAGGATaGCACTGTGCTTCCGCTTCACCTCCTCCACGTTCT +
Preference number: 6 (lower is better)
Translates to: PSSSHRGWGMPG*HCASASPPPRS
Trigger: AGAACGTGGAGGAGGTGAAGCGGAAGCACAGTGCCATCCTGGCATCCCCCAACCCCGATGAGAAGACGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222812.8
ENST00000395154.7
ENST00000395155.3
ENST00000395156.7
ENST00000462135.1
ENST00000470878.5
CDS CCA 72 bp CAGTTTCAACAGCGGGTGATTGGTTACCTGAGAACTTaGTCCCTCCCCGGCAGGGCAGCGTGTCGGGCAGAA +
Preference number: 6 (lower is better)
Translates to: QFQQRVIGYLRT*SLPGRAACRAE
Trigger: TTCTGCCCGACACGCTGCCCTGCCGGGGAGGGACCAAGTTCTCAGGTAACCAATCACCCGCTGTTGAAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461441.5
CDS GCA 72 bp GCCTTCCAGGATTGTGCTGCTCCAACTCTCCCTCCTTaGTACGTCTTCAGCCTCCTGCAACAGGTCCCATGT +
Preference number: 6 (lower is better)
Translates to: AFQDCAAPTLPP*YVFSLLQQVPC
Trigger: ACATGGGACCTGTTGCAGGAGGCTGAAGACGTAGCAAGGAGGGAGAGTTGGAGCAGCACAATCCTGGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470878.5
CDS GCA 72 bp GGCACTGTGCTTCCGCTTCACCTCCTCCACGTTCTCTaGGATCTTGTCAATGAAGCCTCGAATCTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: GTVLPLHLLHVL*DLVNEASNLLH
Trigger: GTGGAGGAGATTCGAGGCTTCATTGACAAGATCGCAGAGAACGTGGAGGAGGTGAAGCGGAAGCACAGTGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222812.8
ENST00000395154.7
ENST00000395155.3
ENST00000395156.7
ENST00000462135.1
ENST00000470878.5
CDS GCA 72 bp CTCAGGTCAGCGGAGGAGCGGTTCAGGCCTTCCTCTTaGTCGATGGACTGCTCGATGCTCTTTAACTTGGAA +
Preference number: 6 (lower is better)
Translates to: LRSAEERFRPSS*SMDCSMLFNLE
Trigger: TTCCAAGTTAAAGAGCATCGAGCAGTCCATCGAGCAAGAGGAAGGCCTGAACCGCTCCTCCGCTGACCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000222812.8
ENST00000395154.7
ENST00000395155.3
ENST00000395156.7
ENST00000462135.1
ENST00000470878.5
ENST00000494245.1
ENST00000496216.5
CDS CAA 72 bp TGCTTCCGCTTCACCTCCTCCACGTTCTCTGCGATCTaGTCAATGAAGCCTCGAATCTCCTCCACCTGCTCA +
Preference number: 6 (lower is better)
Translates to: CFRFTSSTFSAI*SMKPRISSTCS
Trigger: TGAGCAGGTGGAGGAGATTCGAGGCTTCATTGACAAGATCGCAGAGAACGTGGAGGAGGTGAAGCGGAAGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222812.8
ENST00000395154.7
ENST00000395155.3
ENST00000395156.7
ENST00000462135.1
ENST00000470878.5
CDS CAA 90 bp ATGGCACTGTGCTTCCGCTTCACCTCCTCCACGTTCTCTGCGATCTaGTCAATGAAGCCTCGAATCTCCTCCACCTGCTCAAAGAACTCA +
Preference number: 6 (lower is better)
Translates to: MALCFRFTSSTFSAI*SMKPRISSTCSKNS
Trigger: TGAGTTCTTTGAGCAGGTGGAGGAGATTCGAGGCTTCATTGACAAGATCGCAGAGAACGTGGAGGAGGTGAAGCGGAAGCACAGTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222812.8
ENST00000395154.7
ENST00000395155.3
ENST00000395156.7
ENST00000462135.1
ENST00000470878.5
CDS TCA 72 bp GCTTCACCTCCTCCACGTTCTCTGCGATCTTGTCAATaGAGCCTCGAATCTCCTCCACCTGCTCAAAGAACT +
Preference number: 6 (lower is better)
Translates to: ASPPPRSLRSCQ*SLESPPPAQRT
Trigger: AGTTCTTTGAGCAGGTGGAGGAGATTCGAGGCTTCATTGACAAGATCGCAGAGAACGTGGAGGAGGTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222812.8
ENST00000395154.7
ENST00000395155.3
ENST00000395156.7
ENST00000462135.1
ENST00000470878.5
CDS TCA 72 bp AACGAACTTTGTTTGCTGTCTTCTTTATGTCGGACATaGGTTCTTCCAGCTCCTCCTTCGTCTCTGGCGGGC +
Preference number: 6 (lower is better)
Translates to: NELCLLSSLCRT*VLPAPPSSLAG
Trigger: GCCCGCCAGAGACGAAGGAGGAGCTGGAAGAACTCATGTCCGACATAAAGAAGACAGCAAACAAAGTTCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496216.5
CDS TCA 72 bp AACGAACTTTGTTTGCTGTCTTCTTTATGTCGGACATaGGTTCTTCCAGCTCCTCCTTCGTCTCTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: NELCLLSSLCRT*VLPAPPSSLGR
Trigger: CCTCCCCAGAGACGAAGGAGGAGCTGGAAGAACTCATGTCCGACATAAAGAAGACAGCAAACAAAGTTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494245.1