RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STX17 (Homo sapiens)

Ensembl gene IDs: ENSG00000136874

Ensembl transcript IDs: ENST00000259400.11, ENST00000524405.5, ENST00000525342.5, ENST00000525579.5, ENST00000525640.5, ENST00000525847.1, ENST00000526607.1, ENST00000529340.5, ENST00000529385.1, ENST00000531035.5, ENST00000533696.5, ENST00000534052.1

Found 510 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCTGTGAAGCCCAACACCCCACCACCAAGTGCAGCTGCAATTCCTaGCACTTTGAAGCCTGCAAGGAGGCCAATAGGACCCCCTACCAT +
Preference number: 1 (lower is better)
Translates to: TCEAQHPTTKCSCNS*HFEACKEANRTPYH
Trigger: ATGGTAGGGGGTCCTATTGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTGTTGGGCTTCACAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR GCA 90 bp TTGTATCAATTTTCCACCTGTGAAGCCCAACACCCCACCACCAAGTaGAGCTGCAATTCCTGCCACTTTGAAGCCTGCAAGGAGGCCAAT +
Preference number: 1 (lower is better)
Translates to: LYQFSTCEAQHPTTK*SCNSCHFEACKEAN
Trigger: ATTGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTGTTGGGCTTCACAGGTGGAAAATTGATACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR GCA 90 bp GTGTTGAGATTAGCACCACACCATTCCCCGGGTCTGAGTCTTGCATaGGTCTTTGTCCATCATTGTCTAGAATGTGAGAAAGGTAAGCAT +
Preference number: 1 (lower is better)
Translates to: VLRLAPHHSPGLSLA*VFVHHCLECEKGKH
Trigger: ATGCTTACCTTTCTCACATTCTAGACAATGATGGACAAAGACGCATGCAAGACTCAGACCCGGGGAATGGTGTGGTGCTAATCTCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR CCA 90 bp CCAGATTTACCTTATAATGAATCCCTAGTGCTGCCGCTAAGTTGGTaGGCTGAAAGGATAGCCAATTTGGGATGGAAGAGTGGGGTAATA +
Preference number: 1 (lower is better)
Translates to: PDLPYNESLVLPLSW*AERIANLGWKSGVI
Trigger: TATTACCCCACTCTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAGCGGCAGCACTAGGGATTCATTATAAGGTAAATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR CCA 90 bp AAACCAGATTTACCTTATAATGAATCCCTAGTGCTGCCGCTAAGTTaGTGGGCTGAAAGGATAGCCAATTTGGGATGGAAGAGTGGGGTA +
Preference number: 1 (lower is better)
Translates to: KPDLPYNESLVLPLS*WAERIANLGWKSGV
Trigger: TACCCCACTCTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAGCGGCAGCACTAGGGATTCATTATAAGGTAAATCTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR TCA 90 bp TTTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTaGCATACATTATATACCCTCAGCCCAGGGCCTCAATCTCTTAAC +
Preference number: 1 (lower is better)
Translates to: FPGRKSAPWQSSNFT*HTLYTLSPGPQSLN
Trigger: GTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR TCA 90 bp TCCCTAAGTTTTTGGTTCCCTCTTCAACATTCACAGCAGCACTGTTaGCATGGTCTGCAATGCTGTCAATCTTCTCCTGCTGAGAATTCA +
Preference number: 1 (lower is better)
Translates to: SLSFWFPLQHSQQHC*HGLQCCQSSPAENS
Trigger: TGAATTCTCAGCAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTTGAAGAGGGAACCAAAAACTTAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
3UTR GCA 90 bp CTGATCTCAGGATTCCCCGTCCAATTATCTTTCCGTTGTAGCTATTaGCTGATTTGGAATGTTGAAGCTAGTCTGAAAGACCATGAGCCT +
Preference number: 1 (lower is better)
Translates to: LISGFPVQLSFRCSY*LIWNVEASLKDHEP
Trigger: AGGCTCATGGTCTTTCAGACTAGCTTCAACATTCCAAATCAGGCAATAGCTACAACGGAAAGATAATTGGACGGGGAATCCTGAGATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR TCA 90 bp CAATGGACTCCATTATGTAGTCGACCTGTGCTCCTCACTAGGCCCTaGTTTCGCTATCTGATAACAAAGGCTTCTGAACTCTTATTCTTT +
Preference number: 1 (lower is better)
Translates to: QWTPLCSRPVLLTRP*FRYLITKASELLFF
Trigger: AAAGAATAAGAGTTCAGAAGCCTTTGTTATCAGATAGCGAAATCAGGGCCTAGTGAGGAGCACAGGTCGACTACATAATGGAGTCCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR CCA 90 bp AATATTAAGTTTTTCACAGGAGCTGGACAATGGTCCATTCAAGGCTaGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAA +
Preference number: 1 (lower is better)
Translates to: NIKFFTGAGQWSIQG*RIYAPEEYLCCGYQ
Trigger: TTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCCAGCCTTGAATGGACCATTGTCCAGCTCCTGTGAAAAACTTAATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR GCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATaGACAGGTGACAACACTGACATTGTTTTGAAGGTTAAGAAATTG +
Preference number: 1 (lower is better)
Translates to: GGFMLLKNTCAVAIK*TGDNTDIVLKVKKL
Trigger: CAATTTCTTAACCTTCAAAACAATGTCAGTGTTGTCACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR CCA 90 bp ATTTGGTTTTTAACTGCATTTCTTGTCAGTTTGGCTGGGAAGATCTaGACAGCTGGAAGTGAGCTTCTCCATCATTTTCTGTTTCTTTCT +
Preference number: 1 (lower is better)
Translates to: IWFLTAFLVSLAGKI*TAGSELLHHFLFLS
Trigger: AGAAAGAAACAGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAAACTGACAAGAAATGCAGTTAAAAACCAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR TCA 90 bp AGTAATATTCCAATCCTGATGAGCAGTAAAAGTCAAGGGCTTATATaGGTACATACAGTGGTATTCCACACTGGCTCAGTAAAAATGAGA +
Preference number: 1 (lower is better)
Translates to: SNIPILMSSKSQGLI*VHTVVFHTGSVKMR
Trigger: TCTCATTTTTACTGAGCCAGTGTGGAATACCACTGTATGTACTCATATAAGCCCTTGACTTTTACTGCTCATCAGGATTGGAATATTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR TCA 90 bp TATTACAGGTTTCCTCAACTTCTTGTGATTGATGTTACCAGTATTTaGTTCTTACTCCTGTACAAAAATCTTAGAGCACTTAAGGGAGGG +
Preference number: 1 (lower is better)
Translates to: YYRFPQLLVIDVTSI*FLLLYKNLRALKGG
Trigger: CCCTCCCTTAAGTGCTCTAAGATTTTTGTACAGGAGTAAGAATCAAATACTGGTAACATCAATCACAAGAAGTTGAGGAAACCTGTAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR CCA 90 bp TCTTCATCATTAAATTGCTTCTTAAGTTCTTCTACAGATTCCAAATaGAGTTGGAGAAATTCTGCTGTTGCTGCTGATGCTTCTTCTTTA +
Preference number: 1 (lower is better)
Translates to: SSSLNCFLSSSTDSK*SWRNSAVAADASSL
Trigger: TAAAGAAGAAGCATCAGCAGCAACAGCAGAATTTCTCCAACTCCATTTGGAATCTGTAGAAGAACTTAAGAAGCAATTTAATGATGAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525342.5
ENST00000529340.5
3UTR-3UTR GCA 90 bp GCAAGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACACATTCCCCCGATGAGTaGACCTGCCACAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: ARRPIGPPTIPPMSAPATHSPDE*TCHRQS
Trigger: GCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATG...TGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
3UTR-3UTR TCA 90 bp AAGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACAGGTCAATTTTCCACCTGTaGAGCCCAACACCCCACCAC +
Preference number: 2 (lower is better)
Translates to: KEANRTPYHSPDECTCHRSIFHL*SPTPHH
Trigger: GTGGTGGGGTGTTGGGCTTCACAGGTGGAAAATTGA...CCTGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR-3UTR CCA 90 bp AGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACAGGCTCTTGTCAGTTTGGCTaGGAAGATCTGGACAGCTGG +
Preference number: 2 (lower is better)
Translates to: RRPIGPPTIPPMSAPATGSCQFG*EDLDSW
Trigger: CCAGCTGTCCAGATCTTCCCAGCCAAACTGACAAGA...GCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR-3UTR TCA 90 bp CCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACAGGCAGAGCTTCACAGCAGCACTGTTaGCATGGTCTGCAATGCTGT +
Preference number: 2 (lower is better)
Translates to: PIGPPTIPPMSAPATGRASQQHC*HGLQCC
Trigger: ACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGA...AGCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
3UTR-3UTR TCA 90 bp CCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACAGGCAGAGCTCTGGACAGCTGGAAGTaGGCTTCTCCATCATTTTCT +
Preference number: 2 (lower is better)
Translates to: PIGPPTIPPMSAPATGRALDSWK*ASPSFS
Trigger: AGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAG...AGCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR CAA 90 bp AGACATGCAGTTGGGCTGGGCCATGCTTGCTGTGAATGTCAGGTGTaGAGATTAGCACCACACCATTCCCCGGGTCTGAGTCTTGCATGC +
Preference number: 2 (lower is better)
Translates to: RHAVGLGHACCECQV*RLAPHHSPGLSLAC
Trigger: GCATGCAAGACTCAGACCCGGGGAATGGTGTGGTGCTAATCTCAACACCTGACATTCACAGCAAGCATGGCCCAGCCCAACTGCATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR TCA 90 bp CATTTCTTGTCAGTTTGGCTGGGAAGATCTGGACAGCTGGAAGTGAGCTTCTCCCTACCATTCCCCCGATaGGTGCACCTGCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: HFLSVWLGRSGQLEVSFSLPFPR*VHLPQA
Trigger: TGCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAG...GGAGAAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAAACTGACAAGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR-3UTR TCA 90 bp TGCAAGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACCTGTACGTCCTGCATTaGTATGCTCTTCATGCAACT +
Preference number: 2 (lower is better)
Translates to: CKEANRTPYHSPDECTCHLYVLH*YALHAT
Trigger: AGTTGCATGAAGAGCATATCAATGCAGGACGTACAG...GTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529340.5
3UTR-3UTR GCA 90 bp AGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACAGGCACTGTTGACATGGTCTaGAATGCTGTCAATCTTCTC +
Preference number: 2 (lower is better)
Translates to: RRPIGPPTIPPMSAPATGTVDMV*NAVNLL
Trigger: GAGAAGATTGACAGCATTGCAGACCATGTCAACAGT...GCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
3UTR-3UTR TCA 90 bp TGCAGCTGCAATTCCTGCCACTTTGAAGCCTGCAAGGAGGCCAATAGGACCCCCTCAATCTTCTCCTGCTaGGAATTCACTAGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: CSCNSCHFEACKEANRTPSIFSC*EFTRRE
Trigger: CTCTCTCCTAGTGAATTCTCAGCAGGAGAAGATTGA...GGGGGTCCTATTGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR-3UTR CCA 90 bp CCCAGGCTTTTCCTCATCCTTCCTTGTAAGATTTCATATGGCAGCAACGAAGGAACAGCTCACACCTTCTaGGGTGCAGGTGCCCATCCC +
Preference number: 2 (lower is better)
Translates to: PRLFLILPCKISYGSNEGTAHTF*GAGAHP
Trigger: GGGATGGGCACCTGCACCCCAGAAGGTGTGAGCTGT...TCCTTCGTTGCTGCCATATGAAATCTTACAAGGAAGGATGAGGAAAAGCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR CCA 90 bp CCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACAGGCAGAGCTCCTTCCCTAAGTTTTTaGTTCCCTCTTCAACATTCA +
Preference number: 2 (lower is better)
Translates to: PIGPPTIPPMSAPATGRAPSLSF*FPLQHS
Trigger: TGAATGTTGAAGAGGGAACCAAAAACTTAGGGAAGG...AGCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
3UTR-3UTR TCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATTTGTGTTCCAAAAGGTaGCGGAGTGTCCAACAGCAG +
Preference number: 2 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNLCSKR*RSVQQQ
Trigger: CTGCTGTTGGACACTCCGTCACCTTTTGGAACACAA...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR TCA 90 bp GTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCACACTTCAATCCCACTTaGACATCAGTAGCCACTATC +
Preference number: 2 (lower is better)
Translates to: VTECPTAAKVLRIDMLAPHFNPT*TSVATI
Trigger: GATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTG...TGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR GCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTCTTCTGGGGTGCAGGTaGCCATCCCTGTGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGLLGCR*PSLCSE
Trigger: TTCTGAGCACAGGGATGGGCACCTGCACCCCAGAAG...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR GCA 90 bp AGTTTGGCTGGGAAGATCTGGACAGCTGGAAGTGAGCTTCTCCATCATTTTCTGTGCCACAGGCAGAGCTaGCAGCTTGTATTTTGCAGC +
Preference number: 2 (lower is better)
Translates to: SLAGKIWTAGSELLHHFLCHRQS*QLVFCS
Trigger: GCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCA...CAGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR-3UTR CCA 90 bp TGCAGCTGCAATTCCTGCCACTTTGAAGCCTGCAAGGAGGCCAATAGGACCCCCCCTTCCCTAAGTTTTTaGTTCCCTCTTCAACATTCA +
Preference number: 2 (lower is better)
Translates to: CSCNSCHFEACKEANRTPPSLSF*FPLQHS
Trigger: TGAATGTTGAAGAGGGAACCAAAAACTTAGGGAAGG...GGGGGTCCTATTGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR-3UTR TCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTCACCAAGGCTGCTCCTaGGTTCAAGTGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGHQGCS*VQVILP
Trigger: TGGGAGGATCACTTGAACTCAGGAGCAGCCTTGGTG...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR CCA 90 bp AGTTTGGCTGGGAAGATCTGGACAGCTGGAAGTGAGCTTCTCCATCATTTTCTGGCAGCACTGTTGACATaGTCTGCAATGCTGTCAATC +
Preference number: 2 (lower is better)
Translates to: SLAGKIWTAGSELLHHFLAALLT*SAMLSI
Trigger: GATTGACAGCATTGCAGACCATGTCAACAGTGCTGC...CAGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR-3UTR TCA 90 bp TTATATACCCTCAGCCCAGGGCCTCAATCTCTTAACATCTCCATGAACACCCCACACTTCAATCCCACTTaGACATCAGTAGCCACTATC +
Preference number: 2 (lower is better)
Translates to: LYTLSPGPQSLNISMNTPHFNPT*TSVATI
Trigger: GATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTG...TGGGGTGTTCATGGAGATGTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR TCA 90 bp AATGGAGTCAAGTTGGTGACCACTAAGGTTGAAAGATTCATGGCTGGGATGGGAAGGGCACAAGATCTTTaGGGTGTTAGAAGACAGGCT +
Preference number: 2 (lower is better)
Translates to: NGVKLVTTKVERFMAGMGRAQDL*GVRRQA
Trigger: AGCCTGTCTTCTAACACCTCAAAGATCTTGTGCCCT...TCCCATCCCAGCCATGAATCTTTCAACCTTAGTGGTCACCAACTTGACTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR CCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAGAAAATCTGCTCCTTaGCAGTCTTCAAACTTTACC +
Preference number: 2 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNRKSAP*QSSNFT
Trigger: GGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCT...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR CCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTCAGATACCCCCTATCTaGCAGATATATCACCCCTCA +
Preference number: 2 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGQIPPI*QIYHPS
Trigger: TGAGGGGTGATATATCTGCCAGATAGGGGGTATCTG...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR CCA 90 bp AGTTGGCTAAGTTCAATTAAGTCCACCAACAGTCATGGATCTGGTCAAAGGAGGGCAGCACTGTTGACATaGTCTGCAATGCTGTCAATC +
Preference number: 2 (lower is better)
Translates to: SWLSSIKSTNSHGSGQRRAALLT*SAMLSI
Trigger: GATTGACAGCATTGCAGACCATGTCAACAGTGCTGC...CCTCCTTTGACCAGATCCATGACTGTTGGTGGACTTAATTGAACTTAGCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529340.5
3UTR CAA 90 bp GGGAGAATTGACAGGACAAGTCTTGATATAAGGAATGGAGTCAAGTaGGTGACCACTAAGGTTGAAAGATTCATGGCTGGGATGGGAGAA +
Preference number: 2 (lower is better)
Translates to: GRIDRTSLDIRNGVK*VTTKVERFMAGMGE
Trigger: TTCTCCCATCCCAGCCATGAATCTTTCAACCTTAGTGGTCACCAACTTGACTCCATTCCTTATATCAAGACTTGTCCTGTCAATTCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR CCA 90 bp CACCAACAGTCATGGATCTGGTCAAAGGAGGCTGTAGCAAAGTTTCTTCATCATCAATTTCTCGGATATTaGATCGGAGTTGCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: HQQSWIWSKEAVAKFLHHQFLGY*IGVAQP
Trigger: AGGCTGAGCAACTCCGATCCAATATCCGAGAAATTG...ATGATGAAGAAACTTTGCTACAGCCTCCTTTGACCAGATCCATGACTGTTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525342.5
3UTR-3UTR TCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCTTGTGTTCCAAAAGGTaGCGGAGTGTCCAACAGCAG +
Preference number: 2 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPLCSKR*RSVQQQ
Trigger: CTGCTGTTGGACACTCCGTCACCTTTTGGAACACAA...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR TCA 90 bp ACAAAGTTTCTCAATTTCTCGGATATTGGATCGGAGTTGCTGAACTGTACGTCCTCAATCTTCTCCTGCTaGGAATTCACTAGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: TKFLNFSDIGSELLNCTSSIFSC*EFTRRE
Trigger: CTCTCTCCTAGTGAATTCTCAGCAGGAGAAGATTGA...GGACGTACAGTTCAGCAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529340.5
3UTR-3UTR GCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTATAGTTGGACCAAATTaGAATAGGGTTCGCCAATGG +
Preference number: 2 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGIVGPN*NRVRQW
Trigger: CCATTGGCGAACCCTATTGCAATTTGGTCCAACTAT...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR GCA 90 bp CACCAACAGTCATGGATCTGGTCAAAGGAGGCTGTAGCAAAGTTTCTTCATCATACTGTTGACATGGTCTaGAATGCTGTCAATCTTCTC +
Preference number: 2 (lower is better)
Translates to: HQQSWIWSKEAVAKFLHHTVDMV*NAVNLL
Trigger: GAGAAGATTGACAGCATTGCAGACCATGTCAACAGT...ATGATGAAGAAACTTTGCTACAGCCTCCTTTGACCAGATCCATGACTGTTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529340.5
3UTR-3UTR TCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTCTCTTAACATCTCCATaGACACCCCAGCAAACAACA +
Preference number: 2 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFLLTSP*TPQQTT
Trigger: TGTTGTTTGCTGGGGTGTTCATGGAGATGTTAAGAG...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR TCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTATTTATAATTTCAGCTaGCTATGCTGGACGGGTGAT +
Preference number: 2 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGIYNFS*LCWTGD
Trigger: ATCACCCGTCCAGCATAGTCAGCTGAAATTATAAAT...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR TCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCCTCTTAACATCTCCATaGACACCCCAGCAAACAACA +
Preference number: 2 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPLLTSP*TPQQTT
Trigger: TGTTGTTTGCTGGGGTGTTCATGGAGATGTTAAGAG...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR TCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTGACACAGCAGAATCTTaGTGTAACTGTTTCTTAGAT +
Preference number: 2 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGDTAES*CNCFLD
Trigger: ATCTAAGAAACAGTTACATCAAGATTCTGCTGTGTC...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR TCA 90 bp GTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGCTGTACGTCCTGCATTaGTATGCTCTTCATGCAACT +
Preference number: 2 (lower is better)
Translates to: VILSDFQTKFLNFSDIGSLYVLH*YALHAT
Trigger: AGTTGCATGAAGAGCATATCAATGCAGGACGTACAG...CGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529340.5
ENST00000531035.5
3UTR-3UTR GCA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCTCCAGGGAGAAAATCTaGTCCTTGGCAGTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFSREKI*SLAVFK
Trigger: TTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGA...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR GCA 90 bp TTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGGAGTTGCTCGTCCTGCATTGATATaGTCTTCATGCAACTTGTCC +
Preference number: 2 (lower is better)
Translates to: FGLSNKVSQFLGYWIGVARPALI*SSCNLS
Trigger: GGACAAGTTGCATGAAGAGCATATCAATGCAGGACG...AGCAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529340.5
ENST00000531035.5
3UTR-3UTR CCA 90 bp TTTCCTTCACCAGAAGATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGAGAAAATCTGCTCCTTaGCAGTCTTCAAACTTTACC +
Preference number: 2 (lower is better)
Translates to: FPSPEDIVGPNCNRVRQWRKSAP*QSSNFT
Trigger: GGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCT...CCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATCTTCTGGTGAAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR CAA 90 bp AGGCAGAGGAAGAGTTCAGAAGCCAGAAGATTTTTGGAAGAGAAGTaGAGCCTCTTGCATTTTCTTACATCATTAATTTCCTTCACCAGA +
Preference number: 2 (lower is better)
Translates to: RQRKSSEARRFLEEK*SLLHFLTSLISFTR
Trigger: TCTGGTGAAGGAAATTAATGATGTAAGAAAATGCAAGAGGCTCAACTTCTCTTCCAAAAATCTTCTGGCTTCTGAACTCTTCCTCTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR TCA 90 bp AACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACTTCAATCCCACTTaGACATCAGTAGCCACTATC +
Preference number: 2 (lower is better)
Translates to: NPTFLHISSPYQSYRFSFHFNPT*TSVATI
Trigger: GATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTG...AAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR TCA 90 bp TTTCCTTCACCAGAAGATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGGATAACAAAGGCTTCTaGACTCTTATTCTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: FPSPEDIVGPNCNRVRQWDNKGF*TLILFL
Trigger: GAGGAAAAGAATAAGAGTTCAGAAGCCTTTGTTATC...CCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATCTTCTGGTGAAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR GCA 90 bp TTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGGAGTTGCTGAACTGTCGTCCTGCATTGATATaGTCTTCATGCAACTTGTCC +
Preference number: 2 (lower is better)
Translates to: FQTKFLNFSDIGSELLNCRPALI*SSCNLS
Trigger: GGACAAGTTGCATGAAGAGCATATCAATGCAGGACG...ACAGTTCAGCAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529340.5
ENST00000531035.5
3UTR-3UTR CCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTAGAAAATCTGCTCCTTaGCAGTCTTCAAACTTTACC +
Preference number: 2 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFRKSAP*QSSNFT
Trigger: GGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCT...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR GCA 90 bp GAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATTGATATGCTCTTCATaGAACTTGTCCCAGATTCTG +
Preference number: 2 (lower is better)
Translates to: EVLGHPFGLSNKVSQFLGLICSS*NLSQIL
Trigger: CAGAATCTGGGACAAGTTGCATGAAGAGCATATCAA...TCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529340.5
ENST00000531035.5
3UTR-3UTR CCA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTTCCAATTCAGGGTTATaGAAGAAACTAGTCTTCCAT +
Preference number: 2 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSSNSGL*KKLVFH
Trigger: ATGGAAGACTAGTTTCTTCCATAACCCTGAATTGGA...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR GCA 90 bp TCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTGAACTGTACGTCCTaGATTGATATGCTCTTCATG +
Preference number: 2 (lower is better)
Translates to: SSEVLGHPFGLSNKVSQFLNCTS*IDMLFM
Trigger: CATGAAGAGCATATCAATGCAGGACGTACAGTTCAG...AAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529340.5
ENST00000531035.5
3UTR-3UTR GCA 90 bp TTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCTGAACTGTACGTCCTaGATTGATATGCTCTTCATG +
Preference number: 2 (lower is better)
Translates to: FRSTRSSFRTFKQSFSISLNCTS*IDMLFM
Trigger: CATGAAGAGCATATCAATGCAGGACGTACAGTTCAG...AGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529340.5
ENST00000531035.5
3UTR-3UTR GCA 90 bp TTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTTTGATATGCTCTTCATaGAACTTGTCCCAGATTCTG +
Preference number: 2 (lower is better)
Translates to: FRSTRSSFRTFKQSFSISLICSS*NLSQIL
Trigger: CAGAATCTGGGACAAGTTGCATGAAGAGCATATCAA...AGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529340.5
ENST00000531035.5
3UTR CAA 90 bp AAGAGTTCAGAAGCCAGAAGATTTTTGGAAGAGAAGTTGAGCCTCTaGCATTTTCTTACATCATTAATTTCCTTCACCAGAAGATATAGT +
Preference number: 2 (lower is better)
Translates to: KSSEARRFLEEKLSL*HFLTSLISFTRRYS
Trigger: ACTATATCTTCTGGTGAAGGAAATTAATGATGTAAGAAAATGCAAGAGGCTCAACTTCTCTTCCAAAAATCTTCTGGCTTCTGAACTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR GCA 72 bp GCCCAACACCCCACCACCAAGTGCAGCTGCAATTCCTaGCACTTTGAAGCCTGCAAGGAGGCCAATAGGACC +
Preference number: 3 (lower is better)
Translates to: AQHPTTKCSCNS*HFEACKEANRT
Trigger: GGTCCTATTGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTGTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR GCA 72 bp ACCAAGTGCAGCTGCAATTCCTGCCACTTTGAAGCCTaGAAGGAGGCCAATAGGACCCCCTACCATTCCCCC +
Preference number: 3 (lower is better)
Translates to: TKCSCNSCHFEA*KEANRTPYHSP
Trigger: GGGGGAATGGTAGGGGGTCCTATTGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR-3UTR CAA 90 bp AAGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACAGGTGCTCTTCATGCAACTaGTCCCAGATTCTGCACCTT +
Preference number: 3 (lower is better)
Translates to: KEANRTPYHSPDECTCHRCSSCN*SQILHL
Trigger: AAGGTGCAGAATCTGGGACAAGTTGCATGAAGAGCA...CCTGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529340.5
3UTR-3UTR CAA 90 bp CATTCCCCCGATGAGTGCACCTGCCACAGGCAGAGCTGCCAGCTTGTATTTTGCTTCACAGCAGCACTGTaGACATGGTCTGCAATGCTG +
Preference number: 3 (lower is better)
Translates to: HSPDECTCHRQSCQLVFCFTAAL*TWSAML
Trigger: CAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAA...GCAAAATACAAGCTGGCAGCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
3UTR GCA 72 bp TTTTCCACCTGTGAAGCCCAACACCCCACCACCAAGTaGAGCTGCAATTCCTGCCACTTTGAAGCCTGCAAG +
Preference number: 3 (lower is better)
Translates to: FSTCEAQHPTTK*SCNSCHFEACK
Trigger: CTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTGTTGGGCTTCACAGGTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR-3UTR CAA 90 bp CTGCATTTCTTGTCAGTTTGGCTGGGAAGATCTGGACAGCTGGAAGTGAGCTTCGCAATTCCTGCCACTTaGAAGCCTGCAAGGAGGCCA +
Preference number: 3 (lower is better)
Translates to: LHFLSVWLGRSGQLEVSFAIPAT*KPARRP
Trigger: TGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGC...GAAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAAACTGACAAGAAATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR GCA 72 bp AGGCAGGCAGCCCACAGAAGGAAGTTTCTGGACTCATaGAATTCTCCCTGTACAGCACTCAGTTTCAGTATA +
Preference number: 3 (lower is better)
Translates to: RQAAHRRKFLDS*NSPCTALSFSI
Trigger: TATACTGAAACTGAGTGCTGTACAGGGAGAATTGCATGAGTCCAGAAACTTCCTTCTGTGGGCTGCCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR CAA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATACACTTCAATCCCACTaGAACATCAGTAGCCACTAT +
Preference number: 3 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNTLQSH*NISSHY
Trigger: ATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR CAA 90 bp AGTTTGGCTGGGAAGATCTGGACAGCTGGAAGTGAGCTTCTCCATCATTTTCTGCTGCCAGCTTGTATTTaGCAGCCTTCCCTAAGTTTT +
Preference number: 3 (lower is better)
Translates to: SLAGKIWTAGSELLHHFLLPACI*QPSLSF
Trigger: AAAACTTAGGGAAGGCTGCAAAATACAAGCTGGCAG...CAGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR GCA 72 bp TTAGCACCACACCATTCCCCGGGTCTGAGTCTTGCATaGGTCTTTGTCCATCATTGTCTAGAATGTGAGAAA +
Preference number: 3 (lower is better)
Translates to: LAPHHSPGLSLA*VFVHHCLECEK
Trigger: TTTCTCACATTCTAGACAATGATGGACAAAGACGCATGCAAGACTCAGACCCGGGGAATGGTGTGGTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR CCA 72 bp CTAAGTTGGTGGGCTGAAAGGATAGCCAATTTGGGATaGAAGAGTGGGGTAATATGCAGTGATGAAGAAGGG +
Preference number: 3 (lower is better)
Translates to: LSWWAERIANLG*KSGVICSDEEG
Trigger: CCCTTCTTCATCACTGCATATTACCCCACTCTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR CCA 72 bp CCTTATAATGAATCCCTAGTGCTGCCGCTAAGTTGGTaGGCTGAAAGGATAGCCAATTTGGGATGGAAGAGT +
Preference number: 3 (lower is better)
Translates to: PYNESLVLPLSW*AERIANLGWKS
Trigger: ACTCTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAGCGGCAGCACTAGGGATTCATTATAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR CAA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTGCTGACAGACCAAGCTaGGTGACTGGCTTAATAAGT +
Preference number: 3 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGADRPS*VTGLIS
Trigger: ACTTATTAAGCCAGTCACCAAGCTTGGTCTGTCAGC...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR CAA 90 bp AACATTCACAGCAGCACTGTTGACATGGTCTGCAATGCTGTCAATCTTCTCCTGACTGTACGTCCTGCATaGATATGCTCTTCATGCAAC +
Preference number: 3 (lower is better)
Translates to: NIHSSTVDMVCNAVNLLLTVRPA*ICSSCN
Trigger: GTTGCATGAAGAGCATATCAATGCAGGACGTACAGT...CAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529340.5
3UTR GCA 72 bp CTCTTCAACATTCACAGCAGCACTGTTGACATGGTCTaGAATGCTGTCAATCTTCTCCTGCTGAGAATTCAC +
Preference number: 3 (lower is better)
Translates to: LFNIHSSTVDMV*NAVNLLLLRIH
Trigger: GTGAATTCTCAGCAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTTGAAGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
3UTR GCA 72 bp TCGGATATTGGATCGGAGTTGCTGAACTGTACGTCCTaGATTGATATGCTCTTCATGCAACTTGTCCCAGAT +
Preference number: 3 (lower is better)
Translates to: SDIGSELLNCTS*IDMLFMQLVPD
Trigger: ATCTGGGACAAGTTGCATGAAGAGCATATCAATGCAGGACGTACAGTTCAGCAACTCCGATCCAATATCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529340.5
ENST00000531035.5
3UTR CCA 72 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATaGACTCCATTATGTAGTCGACCTGTGCTCCTCACT +
Preference number: 3 (lower is better)
Translates to: DIVGPNCNRVRQ*TPLCSRPVLLT
Trigger: AGTGAGGAGCACAGGTCGACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR CCA 72 bp TTACCTTATAATGAATCCCTAGTGCTGCCGCTAAGTTaGTGGGCTGAAAGGATAGCCAATTTGGGATGGAAG +
Preference number: 3 (lower is better)
Translates to: LPYNESLVLPLS*WAERIANLGWK
Trigger: CTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAGCGGCAGCACTAGGGATTCATTATAAGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR CAA 90 bp AGTTTGGCTGGGAAGATCTGGACAGCTGGAAGTGAGCTTCTCCATCATTTTCTGCTCAGGATAGACATGTaGGCACCAATAATACTGAAA +
Preference number: 3 (lower is better)
Translates to: SLAGKIWTAGSELLHHFLLRIDM*APIILK
Trigger: TTTCAGTATTATTGGTGCCAACATGTCTATCCTGAG...CAGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR TCA 72 bp AGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTaGCATACATTATATACCCTCAGCCCAGGGCCTCAA +
Preference number: 3 (lower is better)
Translates to: RKSAPWQSSNFT*HTLYTLSPGPQ
Trigger: TTGAGGCCCTGGGCTGAGGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR TCA 72 bp ACAATGGTCCATTCAAGGCTGGAGGATTTATGCTCCTaGAGAATACTTGTGCTGTGGCTATCAAATGCACAG +
Preference number: 3 (lower is better)
Translates to: TMVHSRLEDLCS*RILVLWLSNAQ
Trigger: CTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCCAGCCTTGAATGGACCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR CCA 72 bp TTTTTCACAGGAGCTGGACAATGGTCCATTCAAGGCTaGAGGATTTATGCTCCTGAAGAATACTTGTGCTGT +
Preference number: 3 (lower is better)
Translates to: FFTGAGQWSIQG*RIYAPEEYLCC
Trigger: ACAGCACAAGTATTCTTCAGGAGCATAAATCCTCCAGCCTTGAATGGACCATTGTCCAGCTCCTGTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR CCA 72 bp TTAACTGCATTTCTTGTCAGTTTGGCTGGGAAGATCTaGACAGCTGGAAGTGAGCTTCTCCATCATTTTCTG +
Preference number: 3 (lower is better)
Translates to: LTAFLVSLAGKI*TAGSELLHHFL
Trigger: CAGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAAACTGACAAGAAATGCAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524405.5
3UTR GCA 72 bp GGATTCCCCGTCCAATTATCTTTCCGTTGTAGCTATTaGCTGATTTGGAATGTTGAAGCTAGTCTGAAAGAC +
Preference number: 3 (lower is better)
Translates to: GFPVQLSFRCSY*LIWNVEASLKD
Trigger: GTCTTTCAGACTAGCTTCAACATTCCAAATCAGGCAATAGCTACAACGGAAAGATAATTGGACGGGGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR CAA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATACACTTCAATCCCACTaGAACATCAGTAGCCACTAT +
Preference number: 3 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHTLQSH*NISSHY
Trigger: ATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR CAA 90 bp TTTCCTTCACCAGAAGATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGGAGAAAATCTGCTCCTaGGCAGTCTTCAAACTTTAC +
Preference number: 3 (lower is better)
Translates to: FPSPEDIVGPNCNRVRQWEKICS*AVFKLY
Trigger: GTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTC...CCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATCTTCTGGTGAAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR CAA 90 bp GGATCTATCATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAATCAATTTCTCGGATATaGGATCGGAGTTGCTCAGCC +
Preference number: 3 (lower is better)
Translates to: GSIILFRSTRSSFRTFKQSISRI*DRSCSA
Trigger: GGCTGAGCAACTCCGATCCAATATCCGAGAAATTGA...TTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAATGATAGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525342.5
3UTR-3UTR CAA 90 bp TCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGGTGCTCTTCATGCAACTaGTCCCAGATTCTGCACCTT +
Preference number: 3 (lower is better)
Translates to: SSFRTFKQSFSISRILDRCSSCN*SQILHL
Trigger: AAGGTGCAGAATCTGGGACAAGTTGCATGAAGAGCA...CCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529340.5
ENST00000531035.5
3UTR GCA 72 bp ATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATaGACAGGTGACAACACTGACATTGTTTTGAAGGTT +
Preference number: 3 (lower is better)
Translates to: MLLKNTCAVAIK*TGDNTDIVLKV
Trigger: AACCTTCAAAACAATGTCAGTGTTGTCACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR CCA 72 bp GTCCAATTATCTTTCCGTTGTAGCTATTGCCTGATTTaGAATGTTGAAGCTAGTCTGAAAGACCATGAGCCT +
Preference number: 3 (lower is better)
Translates to: VQLSFRCSYCLI*NVEASLKDHEP
Trigger: AGGCTCATGGTCTTTCAGACTAGCTTCAACATTCCAAATCAGGCAATAGCTACAACGGAAAGATAATTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR CAA 90 bp TTTCCTTCACCAGAAGATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGCTCAGGATAGACATGTaGGCACCAATAATACTGAAA +
Preference number: 3 (lower is better)
Translates to: FPSPEDIVGPNCNRVRQWLRIDM*APIILK
Trigger: TTTCAGTATTATTGGTGCCAACATGTCTATCCTGAG...CCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATCTTCTGGTGAAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR CAA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTCTCAGGATAGACATGTaGGCACCAATAATACTGAAA +
Preference number: 3 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFLRIDM*APIILK
Trigger: TTTCAGTATTATTGGTGCCAACATGTCTATCCTGAG...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR CAA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCACACTTCAATCCCACTaGAACATCAGTAGCCACTAT +
Preference number: 3 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPTLQSH*NISSHY
Trigger: ATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR CAA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTGAGAAAATCTGCTCCTaGGCAGTCTTCAAACTTTAC +
Preference number: 3 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSEKICS*AVFKLY
Trigger: GTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTC...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR CAA 90 bp TCATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTACTGTACGTCCTGCATaGATATGCTCTTCATGCAAC +
Preference number: 3 (lower is better)
Translates to: SFSSEVLGHPFGLSNKVSTVRPA*ICSSCN
Trigger: GTTGCATGAAGAGCATATCAATGCAGGACGTACAGT...AGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529340.5
ENST00000531035.5
3UTR TCA 72 bp ATTTCATATGGCAGCAACGAAGGACAAAGGGGACCCTaGGAAACACCTTTCATATTTAAGGTTAACACAAAG +
Preference number: 3 (lower is better)
Translates to: ISYGSNEGQRGP*ETPFIFKVNTK
Trigger: CTTTGTGTTAACCTTAAATATGAAAGGTGTTTCTCAGGGTCCCCTTTGTCCTTCGTTGCTGCCATATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR-3UTR CAA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTCTCAGGATAGACATGTaGGCACCAATAATACTGAAA +
Preference number: 3 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSLRIDM*APIILK
Trigger: TTTCAGTATTATTGGTGCCAACATGTCTATCCTGAG...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR CAA 90 bp AACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTGAGAAAATCTGCTCCTaGGCAGTCTTCAAACTTTAC +
Preference number: 3 (lower is better)
Translates to: NPTFLHISSPYQSYRFSFEKICS*AVFKLY
Trigger: GTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTC...AAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR CCA 72 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATaGAAGAAACTAGTCTTCCATAACCCAACGTTTCTA +
Preference number: 3 (lower is better)
Translates to: STLSIKVSNSGL*KKLVFHNPTFL
Trigger: TAGAAACGTTGGGTTATGGAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR CAA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCTCAGTAGCCACTATCTaGATATACTTGTGTTCCAAA +
Preference number: 3 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFSVATI*IYLCSK
Trigger: TTTGGAACACAAGTATATCAAGATAGTGGCTACTGA...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR-3UTR CAA 90 bp TTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAAATTTTTGTTCCACAGTaGATGAAATCCTTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: FSSEVLGHPFGLSNKVSQIFVPQ*MKSLEK
Trigger: CTTCTCCAAGGATTTCATCAACTGTGGAACAAAAAT...TTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525342.5
3UTR TCA 72 bp AAGGTTAACACAAAGCATGGTTTGGTTTCTGCACTCTaGTGGAAGACAAACGTTGTATATTATCTAGCTATA +
Preference number: 3 (lower is better)
Translates to: KVNTKHGLVSAL*WKTNVVYYLAI
Trigger: TATAGCTAGATAATATACAACGTTTGTCTTCCATCAGAGTGCAGAAACCAAACCATGCTTTGTGTTAACCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCCTGGGATTGCAGGCATaGGCCCCTGCCCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTLGLQA*APAPNP
Trigger: GGGGTTGGGGGCAGGGGCTCATGCCTGCAATCCCAG...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp GTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAAGACGCCAGCGACCCTaGCGACCCGGGGCCTACAGC +
Preference number: 4 (lower is better)
Translates to: VTECPTAAKVLRIDMLAPRRQRP*RPGAYS
Trigger: GCTGTAGGCCCCGGGTCGCCAGGGTCGCTGGCGTCT...TGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GCCTGCAAGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCTCAATTTTCCACCTGTaGAGCCCAACACCCCACCAC +
Preference number: 4 (lower is better)
Translates to: ACKEANRTPYHSPDECTCSIFHL*SPTPHH
Trigger: GTGGTGGGGTGTTGGGCTTCACAGGTGGAAAATTGA...GCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCTTGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR GCA 90 bp CACTTTGAAGCCTGCAAGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGCATTCCCCCGATGAGTaGACCTGCCACAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: HFEACKEANRTPYHSPDEHSPDE*TCHRQS
Trigger: GCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATG...CTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCTTGCAGGCTTCAAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR TCA 90 bp TTATATACCCTCAGCCCAGGGCCTCAATCTCTTAACATCTCCATGAACACCCCAGGCCCACCAAGCCTGTaGGGGCCCGACGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LYTLSPGPQSLNISMNTPGPPSL*GPDAPK
Trigger: TTTGGGGGCGTCGGGCCCTCACAGGCTTGGTGGGCC...TGGGGTGTTCATGGAGATGTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCACAGCTCACACCTTCTaGGGTGCAGGTGCCCATCCC +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTTAHTF*GAGAHP
Trigger: GGGATGGGCACCTGCACCCCAGAAGGTGTGAGCTGT...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp TGTGAAGCCCAACACCCCACCACCAAGTGCAGCTGCAATTCCTGCCACTTTGAACTACCATTCCCCCGATaGGTGCACCTGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: CEAQHPTTKCSCNSCHFELPFPR*VHLPQA
Trigger: TGCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAG...TTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTGTTGGGCTTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR GCA 90 bp GTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCACATTCCCCCGATGAGTaGACCTGCCACAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VTECPTAAKVLRIDMLAPHSPDE*TCHRQS
Trigger: GCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATG...TGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp AGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACAGGCTCAATCTTCTCCTGCTaGGAATTCACTAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: RRPIGPPTIPPMSAPATGSIFSC*EFTRRE
Trigger: CTCTCTCCTAGTGAATTCTCAGCAGGAGAAGATTGA...GCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR TCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATCTACCATTCCCCCGATaGGTGCACCTGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNLPFPR*VHLPQA
Trigger: TGCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAG...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GCAAGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACACAACAGTCATGGATCTaGTCAAAGGAGGCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: ARRPIGPPTIPPMSAPATQQSWI*SKEAVA
Trigger: TGCTACAGCCTCCTTTGACCAGATCCATGACTGTTG...TGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR CCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCGTGCTGCCGCTAAGTTaGTGGGCTGAAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTVLPLS*WAERIA
Trigger: GGCTATCCTTTCAGCCCACCAACTTAGCGGCAGCAC...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCTGCCACAGGCAGAGCTaGCAGCTTGTATTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTCHRQS*QLVFCS
Trigger: GCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCA...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACAGGCAGCAATTTCTCGGATATTaGATCGGAGTTGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: EANRTPYHSPDECTCHRQQFLGY*IGVAEL
Trigger: CAGTTCAGCAACTCCGATCCAATATCCGAGAAATTG...CTGCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR CCA 90 bp CATTCCCCCGATGAGTGCACCTGCCACAGGCAGAGCTGCCAGCTTGTATTTTGCTTGGCTGGGAAGATCTaGACAGCTGGAAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: HSPDECTCHRQSCQLVFCLAGKI*TAGSEL
Trigger: AAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAA...GCAAAATACAAGCTGGCAGCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR CCA 90 bp CATTCCCCCGATGAGTGCACCTGCCACAGGCAGAGCTGCCAGCTTGTATTTTGCTCTTGTCAGTTTGGCTaGGAAGATCTGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: HSPDECTCHRQSCQLVFCSCQFG*EDLDSW
Trigger: CCAGCTGTCCAGATCTTCCCAGCCAAACTGACAAGA...GCAAAATACAAGCTGGCAGCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR TCA 90 bp GTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCATCAATTTTCCACCTGTaGAGCCCAACACCCCACCAC +
Preference number: 4 (lower is better)
Translates to: VTECPTAAKVLRIDMLAPSIFHL*SPTPHH
Trigger: GTGGTGGGGTGTTGGGCTTCACAGGTGGAAAATTGA...TGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCTTGTGTTCCAAAAGGTaGCGGAGTGTCCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTLCSKR*RSVQQQ
Trigger: CTGCTGTTGGACACTCCGTCACCTTTTGGAACACAA...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp CCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACAGGCAGAGCTACTGTTGACATGGTCTaGAATGCTGTCAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: PIGPPTIPPMSAPATGRATVDMV*NAVNLL
Trigger: GAGAAGATTGACAGCATTGCAGACCATGTCAACAGT...AGCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR GCA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTCCCGGGAGGCCGTCCTaGTCGCATCGTCTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSPGRPS*SHRLRP
Trigger: AGGCCGCAGACGATGCGAGCAGGACGGCCTCCCGGG...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTCCCGGGAGGCCGTCCTaGTCGCATCGTCTGCGGCCT +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFPGRPS*SHRLRP
Trigger: AGGCCGCAGACGATGCGAGCAGGACGGCCTCCCGGG...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATCCACCAGCGAACGGATaGGCGGGTCTGTCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHPPANG*AGLSRD
Trigger: GTCCCGGGACAGACCCGCGCATCCGTTCGCTGGTGG...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCCTCCTCACTAGGCCCTaGTTTCGCTATCTGATAACA +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTLLTRP*FRYLIT
Trigger: TGTTATCAGATAGCGAAATCAGGGCCTAGTGAGGAG...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTGGCCCACCAAGCCTGTaGGGGCCCGACGCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSGPPSL*GPDAPK
Trigger: TTTGGGGGCGTCGGGCCCTCACAGGCTTGGTGGGCC...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp CCCAGGCTTTTCCTCATCCTTCCTTGTAAGATTTCATATGGCAGCAACGAAGGACATTCCCCCGATGAGTaGACCTGCCACAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PRLFLILPCKISYGSNEGHSPDE*TCHRQS
Trigger: GCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATG...TCCTTCGTTGCTGCCATATGAAATCTTACAAGGAAGGATGAGGAAAAGCCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATTGCCACTTTGAAGCCTaGAAGGAGGCCAATAGGACC +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNCHFEA*KEANRT
Trigger: GGTCCTATTGGCCTCCTTGCAGGCTTCAAAGTGGCA...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp AGTTTGGCTGGGAAGATCTGGACAGCTGGAAGTGAGCTTCTCCATCATTTTCTGCACCCCACCACCAAGTaGAGCTGCAATTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SLAGKIWTAGSELLHHFLHPTTK*SCNSCH
Trigger: GTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTG...CAGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR GCA 90 bp TTATATACCCTCAGCCCAGGGCCTCAATCTCTTAACATCTCCATGAACACCCCACTTCTGGGGTGCAGGTaGCCATCCCTGTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: LYTLSPGPQSLNISMNTPLLGCR*PSLCSE
Trigger: TTCTGAGCACAGGGATGGGCACCTGCACCCCAGAAG...TGGGGTGTTCATGGAGATGTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp GTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCACTCCACCAACAGTCATaGATCTGGTCAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VTECPTAAKVLRIDMLAPLHQQS*IWSKEA
Trigger: AGCCTCCTTTGACCAGATCCATGACTGTTGGTGGAG...TGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp AGTGCAGCTGCAATTCCTGCCACTTTGAAGCCTGCAAGGAGGCCAATAGGACCCGCAGCACTGTTGACATaGTCTGCAATGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: SAAAIPATLKPARRPIGPAALLT*SAMLSI
Trigger: GATTGACAGCATTGCAGACCATGTCAACAGTGCTGC...GGGTCCTATTGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR CCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTAGACGCCAGCGACCCTaGCGACCCGGGGCCTACAGC +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSRRQRP*RPGAYS
Trigger: GCTGTAGGCCCCGGGTCGCCAGGGTCGCTGGCGTCT...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCCTGTACGTCCTGCATTaGTATGCTCTTCATGCAACT +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTLYVLH*YALHAT
Trigger: AGTTGCATGAAGAGCATATCAATGCAGGACGTACAG...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp GCCTGCAAGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCTCAATATTTATCTGGTaGTTTCTTAACCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ACKEANRTPYHSPDECTCSIFIW*FLNLSR
Trigger: CCTGGAAAGGTTAAGAAAGCACCAGATAAATATTGA...GCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCTTGCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR GCA 90 bp AGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACAGGCTCAATATTTATCTGGTaGTTTCTTAACCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRPIGPPTIPPMSAPATGSIFIW*FLNLSR
Trigger: CCTGGAAAGGTTAAGAAAGCACCAGATAAATATTGA...GCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR GCA 90 bp AATGGAGTCAAGTTGGTGACCACTAAGGTTGAAAGATTCATGGCTGGGATGGGACACCCCACCACCAAGTaGAGCTGCAATTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: NGVKLVTTKVERFMAGMGHPTTK*SCNSCH
Trigger: GTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTG...TCCCATCCCAGCCATGAATCTTTCAACCTTAGTGGTCACCAACTTGACTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATTATGTAGTCGACCTGTaGTCCTCACTAGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNYVVDL*SSLGPD
Trigger: ATCAGGGCCTAGTGAGGAGCACAGGTCGACTACATA...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCCCACCAGCGAACGGATaGGCGGGTCTGTCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFPPANG*AGLSRD
Trigger: GTCCCGGGACAGACCCGCGCATCCGTTCGCTGGTGG...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GCAAGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACATCTACAGATTCCAAATaGAGTTGGAGAAATTCTGCT +
Preference number: 4 (lower is better)
Translates to: ARRPIGPPTIPPMSAPATSTDSK*SWRNSA
Trigger: AGCAGAATTTCTCCAACTCCATTTGGAATCTGTAGA...TGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR TCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATCTGGACAGCTGGAAGTaGGCTTCTCCATCATTTTCT +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNLDSWK*ASPSFS
Trigger: AGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAG...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATCTCCTCACTAGGCCCTaGTTTCGCTATCTGATAACA +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNLLTRP*FRYLIT
Trigger: TGTTATCAGATAGCGAAATCAGGGCCTAGTGAGGAG...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp CCCAGGCTTTTCCTCATCCTTCCTTGTAAGATTTCATATGGCAGCAACGAAGGACACCAAGGCTGCTCCTaGGTTCAAGTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PRLFLILPCKISYGSNEGHQGCS*VQVILP
Trigger: TGGGAGGATCACTTGAACTCAGGAGCAGCCTTGGTG...TCCTTCGTTGCTGCCATATGAAATCTTACAAGGAAGGATGAGGAAAAGCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCCTGAACTGTACGTCCTaGATTGATATGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTLNCTS*IDMLFM
Trigger: CATGAAGAGCATATCAATGCAGGACGTACAGTTCAG...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp ATTCACAGCAGCACTGTTGACATGGTCTGCAATGCTGTCAATCTTCTCCTGCTGTGCCACAGGCAGAGCTaGCAGCTTGTATTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: IHSSTVDMVCNAVNLLLLCHRQS*QLVFCS
Trigger: GCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCA...CAGCAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR GCA 90 bp CCCAGGCTTTTCCTCATCCTTCCTTGTAAGATTTCATATGGCAGCAACGAAGGACTCTGCCTCCCTAAGTaGTGGGATTGCAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: PRLFLILPCKISYGSNEGLCLPK*WDCRHE
Trigger: CTCATGCCTGCAATCCCAGCACTTAGGGAGGCAGAG...TCCTTCGTTGCTGCCATATGAAATCTTACAAGGAAGGATGAGGAAAAGCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATGCACTTCGGATCCAATaGCCTACTTGCCGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHALRIQ*PTCRPA
Trigger: CGCTGGGCGGCAAGTAGGGCATTGGATCCGAAGTGC...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATCAACAGTCATGGATCTaGTCAAAGGAGGCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNQQSWI*SKEAVA
Trigger: TGCTACAGCCTCCTTTGACCAGATCCATGACTGTTG...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp ACCCCACCACCAAGTGCAGCTGCAATTCCTGCCACTTTGAAGCCTGCAAGGAGGCCTTCCCTAAGTTTTTaGTTCCCTCTTCAACATTCA +
Preference number: 4 (lower is better)
Translates to: TPPPSAAAIPATLKPARRPSLSF*FPLQHS
Trigger: TGAATGTTGAAGAGGGAACCAAAAACTTAGGGAAGG...CCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR CCA 90 bp GTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAACCAAGCTTGGTGACTaGCTTAATAAGTCTCCTACC +
Preference number: 4 (lower is better)
Translates to: VTECPTAAKVLRIDMLAPTKLGD*LNKSPT
Trigger: GGTAGGAGACTTATTAAGCCAGTCACCAAGCTTGGT...TGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCTATGAGTACATACAGTaGTATTCCACACTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTYEYIQ*YSTLAQ
Trigger: CTGAGCCAGTGTGGAATACCACTGTATGTACTCATA...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTAACCACCTCTGGGTTTaGCGAGCAGGGGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSNHLWV*RAGASG
Trigger: GCCGGAAGCCCCTGCTCGCCAAACCCAGAGGTGGTT...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATTCAGCTTCAGTAGTATaGAATGCTCCACCAACAGTC +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNSASVV*NAPPTV
Trigger: GACTGTTGGTGGAGCATTTCATACTACTGAAGCTGA...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp TTATATACCCTCAGCCCAGGGCCTCAATCTCTTAACATCTCCATGAACACCCCATCACAGCAGCACTGTTaGCATGGTCTGCAATGCTGT +
Preference number: 4 (lower is better)
Translates to: LYTLSPGPQSLNISMNTPSQQHC*HGLQCC
Trigger: ACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGA...TGGGGTGTTCATGGAGATGTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTCTACCATTCCCCCGATaGGTGCACCTGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFLPFPR*VHLPQA
Trigger: TGCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAG...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATCTCTTAACATCTCCATaGACACCCCAGCAAACAACA +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNLLTSP*TPQQTT
Trigger: TGTTGTTTGCTGGGGTGTTCATGGAGATGTTAAGAG...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATGGAGTCAAGTTGGTaGCCACTAAGGTTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: VTECPTAAKVLRIDMLAPMESSW*PLRLKD
Trigger: ATCTTTCAACCTTAGTGGTCACCAACTTGACTCCAT...TGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp AGTTTGGCTGGGAAGATCTGGACAGCTGGAAGTGAGCTTCTCCATCATTTTCTGTGCAGCTGCAATTCCTaGCACTTTGAAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SLAGKIWTAGSELLHHFLCSCNS*HFEACK
Trigger: CTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCA...CAGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR GCA 90 bp TTATATACCCTCAGCCCAGGGCCTCAATCTCTTAACATCTCCATGAACACCCCATATGTAGTCGACCTGTaGTCCTCACTAGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: LYTLSPGPQSLNISMNTPYVVDL*SSLGPD
Trigger: ATCAGGGCCTAGTGAGGAGCACAGGTCGACTACATA...TGGGGTGTTCATGGAGATGTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTGGGCTGGGCCATGCTTaGTGTGAATGTCAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGGLGHA*CECQVL
Trigger: CAACACCTGACATTCACAGCAAGCATGGCCCAGCCC...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTTCACACCTTCTGGGGTaGAGGTGCCCATCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFSHLLG*RCPSLC
Trigger: GCACAGGGATGGGCACCTGCACCCCAGAAGGTGTGA...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTCCTGCTCGCATCGTCTaGGGCCTCCCTATACCAGCT +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFPARIV*GLPIPA
Trigger: AGCTGGTATAGGGAGGCCGCAGACGATGCGAGCAGG...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp ACCCCACCACCAAGTGCAGCTGCAATTCCTGCCACTTTGAAGCCTGCAAGGAGGATCTTAATGAATTTCTaGATAGCTGGTTCAAGACGG +
Preference number: 4 (lower is better)
Translates to: TPPPSAAAIPATLKPARRILMNF*IAGSRR
Trigger: CCGTCTTGAACCAGCTATCCAGAAATTCATTAAGAT...CCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR CCA 90 bp TGCAGCTGCAATTCCTGCCACTTTGAAGCCTGCAAGGAGGCCAATAGGACCCCCCCTTTCCAGGTCTGTTaGGATTACTATCTTAATGAA +
Preference number: 4 (lower is better)
Translates to: CSCNSCHFEACKEANRTPPFQVC*DYYLNE
Trigger: TTCATTAAGATAGTAATCCCAACAGACCTGGAAAGG...GGGGGTCCTATTGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR CCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCCCTTCCCTAAGTTTTTaGTTCCCTCTTCAACATTCA +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTPSLSF*FPLQHS
Trigger: TGAATGTTGAAGAGGGAACCAAAAACTTAGGGAAGG...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp TTATATACCCTCAGCCCAGGGCCTCAATCTCTTAACATCTCCATGAACACCCCATTGGCTGGGAAGATCTaGACAGCTGGAAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LYTLSPGPQSLNISMNTPLAGKI*TAGSEL
Trigger: AAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAA...TGGGGTGTTCATGGAGATGTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp CTAAGTTGGTGGGCTGAAAGGATAGCCAATTTGGGATGGAAGAGTGGGGTAATACTGGTCTCAAACTCCTaGGCTCAAGTGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSWWAERIANLGWKSGVILVSNS*AQVILW
Trigger: CCAGAGGATCACTTGAGCCCAGGAGTTTGAGACCAG...TATTACCCCACTCTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCCAGGAGGAGCCACCATaGCGCTCGCACTTCGGATCC +
Preference number: 4 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPQEEPP*RSHFGS
Trigger: GGATCCGAAGTGCGAGCGCCATGGTGGCTCCTCCTG...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCAACCACCTCTGGGTTTaGCGAGCAGGGGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPNHLWV*RAGASG
Trigger: GCCGGAAGCCCCTGCTCGCCAAACCCAGAGGTGGTT...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTTCTGCCAACCACCTCTaGGTTTGGCGAGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFSANHL*VWRAGA
Trigger: AGCCCCTGCTCGCCAAACCCAGAGGTGGTTGGCAGA...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
3UTR CAA 72 bp CTGCCGCTAAGTTGGTGGGCTGAAAGGATAGCCAATTaGGGATGGAAGAGTGGGGTAATATGCAGTGATGAA +
Preference number: 4 (lower is better)
Translates to: LPLSWWAERIAN*GWKSGVICSDE
Trigger: TTCATCACTGCATATTACCCCACTCTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAGCGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp GTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGCTACCATTCCCCCGATaGGTGCACCTGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: VILSDFQTKFLNFSDIGSLPFPR*VHLPQA
Trigger: TGCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAG...CGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529340.5
CDS-3UTR TCA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCCTACCATTCCCCCGATaGGTGCACCTGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFLPFPR*VHLPQA
Trigger: TGCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAG...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCTTTTGGAAGAGAAGTTaGGCCTCTTGCATTTTCTTA +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTFWKRS*ASCIFL
Trigger: TAAGAAAATGCAAGAGGCTCAACTTCTCTTCCAAAA...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTCTGGGGAAAAGGATGTaGGGTAGCAAGCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGLGKRM*GSKRVL
Trigger: GAGAACTCGCTTGCTACCTCACATCCTTTTCCCCAG...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTACTATGCTGGACGGGTaGTGTCAGAATTACCCCTGG +
Preference number: 4 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGTMLDG*CQNYPW
Trigger: CCAGGGGTAATTCTGACATCACCCGTCCAGCATAGT...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCACTCCTGGGCTCAAGTaGTCCTCTGGCCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFTPGLK*SSGLCL
Trigger: GAGGCAGAGGCCAGAGGATCACTTGAGCCCAGGAGT...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp TCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTGGCGGGAGGACCACTTaGGCCCAGGAGTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: SSEVLGHPFGLSNKVSQFGGRTT*AQEFMA
Trigger: GGCCATGAACTCCTGGGCTCAAGTGGTCCTCCCGCC...AAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531035.5
CDS-3UTR GCA 90 bp TCTTTGTATCAATTTTCCACCTGTGAAGCCCAACACCCCACCACCAAGTGCAGCCGTCCTGCATTGATATaGTCTTCATGCAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: SLYQFSTCEAQHPTTKCSRPALI*SSCNLS
Trigger: GGACAAGTTGCATGAAGAGCATATCAATGCAGGACG...GCTGCACTTGGTGGTGGGGTGTTGGGCTTCACAGGTGGAAAATTGATACAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR GCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTTGCCACAGGCAGAGCTaGCAGCTTGTATTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGCHRQS*QLVFCS
Trigger: GCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCA...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTCACCCCACCACCAAGTaGAGCTGCAATTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSHPTTK*SCNSCH
Trigger: GTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTG...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATATAGTTGGACCAAATTaGAATAGGGTTCGCCAATGG +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNIVGPN*NRVRQW
Trigger: CCATTGGCGAACCCTATTGCAATTTGGTCCAACTAT...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATGCATGGTTTGGTTTCTaGACTCTGATGGAAGACAAA +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNAWFGF*TLMEDK
Trigger: TTTGTCTTCCATCAGAGTGCAGAAACCAAACCATGC...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCATCCAATGCCCTACTTaGCGCCCAGCGCCTCTTGCG +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFIQCPT*RPAPLA
Trigger: CGCAAGAGGCGCTGGGCGGCAAGTAGGGCATTGGAT...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCGCACTTCGGATCCAATaGCCTACTTGCCGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFALRIQ*PTCRPA
Trigger: CGCTGGGCGGCAAGTAGGGCATTGGATCCGAAGTGC...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp CCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACCCTGCTCGCATCGTCTaGGGCCTCCCTATACCAGCT +
Preference number: 4 (lower is better)
Translates to: PTFLHISSPYQSYRFSFHPARIV*GLPIPA
Trigger: AGCTGGTATAGGGAGGCCGCAGACGATGCGAGCAGG...GTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TTTCCTTCACCAGAAGATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGAGGTGTGGGACCTTCTaGCAACCACCTCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: FPSPEDIVGPNCNRVRQWRCGTF*QPPLGL
Trigger: CAAACCCAGAGGTGGTTGGCAGAAGGTCCCACACCT...CCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATCTTCTGGTGAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCCCTTTCCAGGTCTGTTaGGATTACTATCTTAATGAA +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTPFQVC*DYYLNE
Trigger: TTCATTAAGATAGTAATCCCAACAGACCTGGAAAGG...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCTCTACAGATTCCAAATaGAGTTGGAGAAATTCTGCT +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTSTDSK*SWRNSA
Trigger: AGCAGAATTTCTCCAACTCCATTTGGAATCTGTAGA...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCACCTTCCCTAAGTTTTTaGTTCCCTCTTCAACATTCA +
Preference number: 4 (lower is better)
Translates to: VTECPTAAKVLRIDMLAPPSLSF*FPLQHS
Trigger: TGAATGTTGAAGAGGGAACCAAAAACTTAGGGAAGG...TGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp CTAAGTTGGTGGGCTGAAAGGATAGCCAATTTGGGATGGAAGAGTGGGGTAATATTGGCTGGGAAGATCTaGACAGCTGGAAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LSWWAERIANLGWKSGVILAGKI*TAGSEL
Trigger: AAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAA...TATTACCCCACTCTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp GTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAAGAAAATCTGCTCCTTaGCAGTCTTCAAACTTTACC +
Preference number: 4 (lower is better)
Translates to: VTECPTAAKVLRIDMLAPRKSAP*QSSNFT
Trigger: GGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCT...TGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATAGGGTTCGCCAATaGACTCCATTATGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNNRVRQ*TPLCSR
Trigger: TCGACTACATAATGGAGTCCATTGGCGAACCCTATT...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCATTCCTCATTATACATaGGTAGAATTCACCCCAGAA +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTIPHYT*VEFTPE
Trigger: TTCTGGGGTGAATTCTACCCATGTATAATGAGGAAT...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp CCCAGGCTTTTCCTCATCCTTCCTTGTAAGATTTCATATGGCAGCAACGAAGGAATCCTCCAGGAACTCTaGTCAGTTCTACACAGCACC +
Preference number: 4 (lower is better)
Translates to: PRLFLILPCKISYGSNEGILQEL*SVLHST
Trigger: GGTGCTGTGTAGAACTGACCAGAGTTCCTGGAGGAT...TCCTTCGTTGCTGCCATATGAAATCTTACAAGGAAGGATGAGGAAAAGCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp AACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCAGGAGGAGCCACCATaGCGCTCGCACTTCGGATCC +
Preference number: 4 (lower is better)
Translates to: NPTFLHISSPYQSYRFSFQEEPP*RSHFGS
Trigger: GGATCCGAAGTGCGAGCGCCATGGTGGCTCCTCCTG...AAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCTCTGCCAACCACCTCTaGGTTTGGCGAGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFSANHL*VWRAGA
Trigger: AGCCCCTGCTCGCCAAACCCAGAGGTGGTTGGCAGA...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCGAGGGAGCCAAGGTGTaGGACCTTCTGCCAACCACC +
Preference number: 4 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPEGAKV*DLLPTT
Trigger: GGTGGTTGGCAGAAGGTCCCACACCTTGGCTCCCTC...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp AGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGGAGCCCAGGAGTTCATaGCCAGCCTGGGCAACATGC +
Preference number: 4 (lower is better)
Translates to: RSTRSSFRTFKQSFSISREPRSS*PAWATC
Trigger: GCATGTTGCCCAGGCTGGCCATGAACTCCTGGGCTC...CCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531035.5
CDS-3UTR TCA 90 bp ATTCACAGCAGCACTGTTGACATGGTCTGCAATGCTGTCAATCTTCTCCTGCTGTCAATCTTCTCCTGCTaGGAATTCACTAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: IHSSTVDMVCNAVNLLLLSIFSC*EFTRRE
Trigger: CTCTCTCCTAGTGAATTCTCAGCAGGAGAAGATTGA...CAGCAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR TCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTTCACAGCAGCACTGTTaGCATGGTCTGCAATGCTGT +
Preference number: 4 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGSQQHC*HGLQCC
Trigger: ACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGA...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp TGGTTTTTAACTGCATTTCTTGTCAGTTTGGCTGGGAAGATCTGGACAGCTGGATCACAGCAGCACTGTTaGCATGGTCTGCAATGCTGT +
Preference number: 4 (lower is better)
Translates to: WFLTAFLVSLAGKIWTAGSQQHC*HGLQCC
Trigger: ACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGA...TCCAGCTGTCCAGATCTTCCCAGCCAAACTGACAAGAAATGCAGTTAAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR TCA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTCAATTTTCCACCTGTaGAGCCCAACACCCCACCAC +
Preference number: 4 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHSIFHL*SPTPHH
Trigger: GTGGTGGGGTGTTGGGCTTCACAGGTGGAAAATTGA...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp TTAACTGCATTTCTTGTCAGTTTGGCTGGGAAGATCTGGACAGCTGGAAGTGAGCTGGACAGCTGGAAGTaGGCTTCTCCATCATTTTCT +
Preference number: 4 (lower is better)
Translates to: LTAFLVSLAGKIWTAGSELDSWK*ASPSFS
Trigger: AGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAG...CTCACTTCCAGCTGTCCAGATCTTCCCAGCCAAACTGACAAGAAATGCAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR TCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTACCATTCCCCGGGTCTaGGTCTTGCATGCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFTIPRV*VLHASL
Trigger: CAAAGACGCATGCAAGACTCAGACCCGGGGAATGGT...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATTCACCCCTTTGTAGTTaGGTAAACCTCTGCAAATTA +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNSPLCS*VNLCKL
Trigger: TAATTTGCAGAGGTTTACTCAACTACAAAGGGGTGA...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCAGGCTCCGCCACTTCTaGAAAACAGGAGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFRLRHF*KTGGAT
Trigger: GGTGGCTCCTCCTGTTTTTCAGAAGTGGCGGAGCCT...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCAGGCTCCGCCACTTCTaGAAAACAGGAGGAGCCACC +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFRLRHF*KTGGAT
Trigger: GGTGGCTCCTCCTGTTTTTCAGAAGTGGCGGAGCCT...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCTCAATATTTATCTGGTaGTTTCTTAACCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTSIFIW*FLNLSR
Trigger: CCTGGAAAGGTTAAGAAAGCACCAGATAAATATTGA...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TCATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCATTCCCCCGATGAGTaGACCTGCCACAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SFSSEVLGHPFGLSNKVSHSPDE*TCHRQS
Trigger: GCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATG...AGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529340.5
CDS-3UTR GCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACACATTCCCCCGATGAGTaGACCTGCCACAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTHSPDE*TCHRQS
Trigger: GCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATG...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TTTCCTTCACCAGAAGATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGTGCCACTTTGAAGCCTaGAAGGAGGCCAATAGGACC +
Preference number: 4 (lower is better)
Translates to: FPSPEDIVGPNCNRVRQWCHFEA*KEANRT
Trigger: GGTCCTATTGGCCTCCTTGCAGGCTTCAAAGTGGCA...CCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATCTTCTGGTGAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCCACCCCACCACCAAGTaGAGCTGCAATTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFHPTTK*SCNSCH
Trigger: GTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGGTG...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TTATATACCCTCAGCCCAGGGCCTCAATCTCTTAACATCTCCATGAACACCCCACTCAAAACTGGAACATaGCCCAGGAAATGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LYTLSPGPQSLNISMNTPLKTGT*PRKCSW
Trigger: CCAAGAACATTTCCTGGGGCATGTTCCAGTTTTGAG...TGGGGTGTTCATGGAGATGTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATTTTTCTGGGATGATCTaGAAAATGTCTTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNFSGMI*KMSLEA
Trigger: TGCCTCCAAAGACATTTTGCAGATCATCCCAGAAAA...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACAATCCAATGCCCTACTTaGCGCCCAGCGCCTCTTGCG +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTIQCPT*RPAPLA
Trigger: CGCAAGAGGCGCTGGGCGGCAAGTAGGGCATTGGAT...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp AATGGAGTCAAGTTGGTGACCACTAAGGTTGAAAGATTCATGGCTGGGATGGGACAACAGTCATGGATCTaGTCAAAGGAGGCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: NGVKLVTTKVERFMAGMGQQSWI*SKEAVA
Trigger: TGCTACAGCCTCCTTTGACCAGATCCATGACTGTTG...TCCCATCCCAGCCATGAATCTTTCAACCTTAGTGGTCACCAACTTGACTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAAGTCAGTGACCAGTTaGCTAAGTTCAATTAAGTCC +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNKSVTS*LSSIKS
Trigger: GGACTTAATTGAACTTAGCCAACTGGTCACTGACTT...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATTCCTCATTATACATaGGTAGAATTCACCCCAGAA +
Preference number: 4 (lower is better)
Translates to: VTECPTAAKVLRIDMLAPIPHYT*VEFTPE
Trigger: TTCTGGGGTGAATTCTACCCATGTATAATGAGGAAT...TGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp TCTTCAACATTCACAGCAGCACTGTTGACATGGTCTGCAATGCTGTCAATCTTCGTCCACCAACAGTCATaGATCTGGTCAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSTFTAALLTWSAMLSIFVHQQS*IWSKEA
Trigger: AGCCTCCTTTGACCAGATCCATGACTGTTGGTGGAC...GAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR CCA 90 bp AACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTGAGGGAGCCAAGGTGTaGGACCTTCTGCCAACCACC +
Preference number: 4 (lower is better)
Translates to: NPTFLHISSPYQSYRFSFEGAKV*DLLPTT
Trigger: GGTGGTTGGCAGAAGGTCCCACACCTTGGCTCCCTC...AAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
3UTR CAA 72 bp CGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATATaGGATCGGAGTTGCTCAGCCTCCCAAAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RTFKQSFSISRI*DRSCSASQSAG
Trigger: CCCAGCACTTTGGGAGGCTGAGCAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525342.5
CDS-3UTR TCA 90 bp TTCAGTAGTATGAAATGCTCCACCAACAGTCATGGATCTGGTCAAAGGAGGCTGCTGTACGTCCTGCATTaGTATGCTCTTCATGCAACT +
Preference number: 4 (lower is better)
Translates to: FSSMKCSTNSHGSGQRRLLYVLH*YALHAT
Trigger: AGTTGCATGAAGAGCATATCAATGCAGGACGTACAG...CAGCCTCCTTTGACCAGATCCATGACTGTTGGTGGAGCATTTCATACTACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525342.5
CDS-3UTR TCA 90 bp CCCAGGCTTTTCCTCATCCTTCCTTGTAAGATTTCATATGGCAGCAACGAAGGACACTTCAATCCCACTTaGACATCAGTAGCCACTATC +
Preference number: 4 (lower is better)
Translates to: PRLFLILPCKISYGSNEGHFNPT*TSVATI
Trigger: GATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTG...TCCTTCGTTGCTGCCATATGAAATCTTACAAGGAAGGATGAGGAAAAGCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATGATAACAAAGGCTTCTaGACTCTTATTCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNDNKGF*TLILFL
Trigger: GAGGAAAAGAATAAGAGTTCAGAAGCCTTTGTTATC...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp CTAAGTTGGTGGGCTGAAAGGATAGCCAATTTGGGATGGAAGAGTGGGGTAATAATGTTGAAGCTAGTCTaGAAGACCATGAGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: LSWWAERIANLGWKSGVIMLKLV*KTMSLS
Trigger: GCTAAGGCTCATGGTCTTTCAGACTAGCTTCAACAT...TATTACCCCACTCTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp ATTCACAGCAGCACTGTTGACATGGTCTGCAATGCTGTCAATCTTCTCCTGCTGAGTACTTCTCAATTGTaGGCTTTCCTCAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: IHSSTVDMVCNAVNLLLLSTSQL*AFLKGK
Trigger: CTTCCCTTTGAGGAAAGCTCACAATTGAGAAGTACT...CAGCAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529340.5
CDS-3UTR GCA 90 bp TTCTTGTCAGTTTGGCTGGGAAGATCTGGACAGCTGGAAGTGAGCTTCTCCATCTTGATATGCTCTTCATaGAACTTGTCCCAGATTCTG +
Preference number: 4 (lower is better)
Translates to: FLSVWLGRSGQLEVSFSILICSS*NLSQIL
Trigger: CAGAATCTGGGACAAGTTGCATGAAGAGCATATCAA...GATGGAGAAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAAACTGACAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR GCA 90 bp CCCTCTTCAACATTCACAGCAGCACTGTTGACATGGTCTGCAATGCTGTCAATCCTGAACTGTACGTCCTaGATTGATATGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: PSSTFTAALLTWSAMLSILNCTS*IDMLFM
Trigger: CATGAAGAGCATATCAATGCAGGACGTACAGTTCAG...GATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTTGAAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR GCA 90 bp AATGGAGTCAAGTTGGTGACCACTAAGGTTGAAAGATTCATGGCTGGGATGGGAGGTTTCCCACGATTCTaGAGCATTTTGATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: NGVKLVTTKVERFMAGMGGFPRF*SILILR
Trigger: CCTCAAGATCAAAATGCTGCAGAATCGTGGGAAACC...TCCCATCCCAGCCATGAATCTTTCAACCTTAGTGGTCACCAACTTGACTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp CAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGGAGTTGCTGAACTGTACGTGCCACAGGCAGAGCTaGCAGCTTGTATTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: QTKFLNFSDIGSELLNCTCHRQS*QLVFCS
Trigger: GCTGCAAAATACAAGCTGGCAGCTCTGCCTGTGGCA...CGTACAGTTCAGCAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529340.5
CDS-3UTR GCA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTGCAGCTGCAATTCCTaGCACTTTGAAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHCSCNS*HFEACK
Trigger: CTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCA...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCAGGTGTGGGACCTTCTaGCAACCACCTCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFRCGTF*QPPLGL
Trigger: CAAACCCAGAGGTGGTTGGCAGAAGGTCCCACACCT...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp TTATATACCCTCAGCCCAGGGCCTCAATCTCTTAACATCTCCATGAACACCCCACAATTTCTCGGATATTaGATCGGAGTTGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: LYTLSPGPQSLNISMNTPQFLGY*IGVAEL
Trigger: CAGTTCAGCAACTCCGATCCAATATCCGAGAAATTG...TGGGGTGTTCATGGAGATGTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATCTGCCGCTAAGTTGGTaGGCTGAAAGGATAGCCAAT +
Preference number: 4 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHLPLSW*AERIAN
Trigger: ATTGGCTATCCTTTCAGCCCACCAACTTAGCGGCAG...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCGATTCATGGCTGGGATaGGAGAAGAGAGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPDSWLG*EKRAAP
Trigger: AGGGGCAGCTCTCTTCTCCCATCCCAGCCATGAATC...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATCACCCTGTGTTAAAGTaGCAGAGCAAGGTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHHPVLK*QSKVQK
Trigger: TTTCTGGACCTTGCTCTGTCACTTTAACACAGGGTG...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCGCTCCTGAGTTCAAGTaGTCCTCCCACTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFAPEFK*SSHFSF
Trigger: GAAGCTGAAGTGGGAGGATCACTTGAACTCAGGAGC...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp TTATATACCCTCAGCCCAGGGCCTCAATCTCTTAACATCTCCATGAACACCCCATTGATATGCTCTTCATaGAACTTGTCCCAGATTCTG +
Preference number: 4 (lower is better)
Translates to: LYTLSPGPQSLNISMNTPLICSS*NLSQIL
Trigger: CAGAATCTGGGACAAGTTGCATGAAGAGCATATCAA...TGGGGTGTTCATGGAGATGTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TCGGAGTTGCTGAACTGTACGTCCTGCATTGATATGCTCTTCATGCAACTTGTCACTGTTGACATGGTCTaGAATGCTGTCAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: SELLNCTSCIDMLFMQLVTVDMV*NAVNLL
Trigger: GAGAAGATTGACAGCATTGCAGACCATGTCAACAGT...GACAAGTTGCATGAAGAGCATATCAATGCAGGACGTACAGTTCAGCAACTCCGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529340.5
CDS-3UTR GCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCCCCGGGTCTGAGTCTTaGATGCGTCTTTGTCCATCA +
Preference number: 4 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPPGSES*MRLCPS
Trigger: TGATGGACAAAGACGCATGCAAGACTCAGACCCGGG...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp TTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGGAGTTGCTCAGCCTCCTCCACCAACAGTCATaGATCTGGTCAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FQTKFLNFSDIGSELLSLLHQQS*IWSKEA
Trigger: AGCCTCCTTTGACCAGATCCATGACTGTTGGTGGAG...GAGGCTGAGCAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525342.5
CDS-3UTR CCA 90 bp TTATATACCCTCAGCCCAGGGCCTCAATCTCTTAACATCTCCATGAACACCCCAAAGTCAGTGACCAGTTaGCTAAGTTCAATTAAGTCC +
Preference number: 4 (lower is better)
Translates to: LYTLSPGPQSLNISMNTPKSVTS*LSSIKS
Trigger: GGACTTAATTGAACTTAGCCAACTGGTCACTGACTT...TGGGGTGTTCATGGAGATGTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTTCTTGTCAGTTTGGCTaGGAAGATCTGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFSCQFG*EDLDSW
Trigger: CCAGCTGTCCAGATCTTCCCAGCCAAACTGACAAGA...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCAGCTTCCCATGTAGCTaGGACCACAGGTGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFSFPCS*DHRCVL
Trigger: TAGCACACACCTGTGGTCCCAGCTACATGGGAAGCT...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp CCCAGGCTTTTCCTCATCCTTCCTTGTAAGATTTCATATGGCAGCAACGAAGGAAATCTTGCAGGCAGGTaGATGGGATTGAAATACTCT +
Preference number: 4 (lower is better)
Translates to: PRLFLILPCKISYGSNEGNLAGR*MGLKYS
Trigger: AGAGTATTTCAATCCCATCCACCTGCCTGCAAGATT...TCCTTCGTTGCTGCCATATGAAATCTTACAAGGAAGGATGAGGAAAAGCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
3UTR CAA 72 bp GACAGGACAAGTCTTGATATAAGGAATGGAGTCAAGTaGGTGACCACTAAGGTTGAAAGATTCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DRTSLDIRNGVK*VTTKVERFMAG
Trigger: CCCAGCCATGAATCTTTCAACCTTAGTGGTCACCAACTTGACTCCATTCCTTATATCAAGACTTGTCCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACATCAATTTTCCACCTGTaGAGCCCAACACCCCACCAC +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTSIFHL*SPTPHH
Trigger: GTGGTGGGGTGTTGGGCTTCACAGGTGGAAAATTGA...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCTTGTGTTCCAAAAGGTaGCGGAGTGTCCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFLCSKR*RSVQQQ
Trigger: CTGCTGTTGGACACTCCGTCACCTTTTGGAACACAA...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTAGGGCACAAGATCTTTaGGGTGTTAGAAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSRAQDL*GVRRQA
Trigger: AGCCTGTCTTCTAACACCTCAAAGATCTTGTGCCCT...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCGGGCCATGCTTGCTGTaGATGTCAGGTGTTGAGATT +
Preference number: 4 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFGPCLL*MSGVEI
Trigger: AATCTCAACACCTGACATTCACAGCAAGCATGGCCC...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCAGCCTTTCTGCGGTTTaGGATAGACATGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFSLSAV*DRHAVG
Trigger: CCCAACTGCATGTCTATCTCAAACCGCAGAAAGGCT...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp TTTCCTTCACCAGAAGATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGCGTCCTGCATTGATATaGTCTTCATGCAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: FPSPEDIVGPNCNRVRQWRPALI*SSCNLS
Trigger: GGACAAGTTGCATGAAGAGCATATCAATGCAGGACG...CCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATCTTCTGGTGAAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATGGTTTCCCACGATTCTaGAGCATTTTGATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHGFPRF*SILILR
Trigger: CCTCAAGATCAAAATGCTGCAGAATCGTGGGAAACC...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TTTCCTTCACCAGAAGATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGGGTTTCCCACGATTCTaGAGCATTTTGATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: FPSPEDIVGPNCNRVRQWGFPRF*SILILR
Trigger: CCTCAAGATCAAAATGCTGCAGAATCGTGGGAAACC...CCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATCTTCTGGTGAAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp AACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTTGCCACTTTGAAGCCTaGAAGGAGGCCAATAGGACC +
Preference number: 4 (lower is better)
Translates to: NPTFLHISSPYQSYRFSFCHFEA*KEANRT
Trigger: GGTCCTATTGGCCTCCTTGCAGGCTTCAAAGTGGCA...AAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCTGCAGCTGCAATTCCTaGCACTTTGAAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFCSCNS*HFEACK
Trigger: CTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCA...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTGCAGCTGCAATTCCTaGCACTTTGAAGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSCSCNS*HFEACK
Trigger: CTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCA...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TTTCCTTCACCAGAAGATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGTCCAGGGAGAAAATCTaGTCCTTGGCAGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FPSPEDIVGPNCNRVRQWSREKI*SLAVFK
Trigger: TTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGA...CCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATCTTCTGGTGAAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp CTAAGTTGGTGGGCTGAAAGGATAGCCAATTTGGGATGGAAGAGTGGGGTAATAAAAAGGACTGTAACTTaGCTATGTGTGAAGACTGCT +
Preference number: 4 (lower is better)
Translates to: LSWWAERIANLGWKSGVIKRTVT*LCVKTA
Trigger: AGCAGTCTTCACACATAGGCAAGTTACAGTCCTTTT...TATTACCCCACTCTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTCAACAGTCATGGATCTaGTCAAAGGAGGCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFQQSWI*SKEAVA
Trigger: TGCTACAGCCTCCTTTGACCAGATCCATGACTGTTG...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCCTCCACCAACAGTCATaGATCTGGTCAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFLHQQS*IWSKEA
Trigger: AGCCTCCTTTGACCAGATCCATGACTGTTGGTGGAG...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTCTCCACCAACAGTCATaGATCTGGTCAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSLHQQS*IWSKEA
Trigger: AGCCTCCTTTGACCAGATCCATGACTGTTGGTGGAG...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTGCAGCACTGTTGACATaGTCTGCAATGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSAALLT*SAMLSI
Trigger: GATTGACAGCATTGCAGACCATGTCAACAGTGCTGC...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTGCAGCACTGTTGACATaGTCTGCAATGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFAALLT*SAMLSI
Trigger: GATTGACAGCATTGCAGACCATGTCAACAGTGCTGC...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp CCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACTCTTGTCAGTTTGGCTaGGAAGATCTGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTFLHISSPYQSYRFSFHSCQFG*EDLDSW
Trigger: CCAGCTGTCCAGATCTTCCCAGCCAAACTGACAAGA...GTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp CTAAGTTGGTGGGCTGAAAGGATAGCCAATTTGGGATGGAAGAGTGGGGTAATAAGAAAATCTGCTCCTTaGCAGTCTTCAAACTTTACC +
Preference number: 4 (lower is better)
Translates to: LSWWAERIANLGWKSGVIRKSAP*QSSNFT
Trigger: GGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCT...TATTACCCCACTCTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp TTATATACCCTCAGCCCAGGGCCTCAATCTCTTAACATCTCCATGAACACCCCATCCAATTCAGGGTTATaGAAGAAACTAGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LYTLSPGPQSLNISMNTPSNSGL*KKLVFH
Trigger: ATGGAAGACTAGTTTCTTCCATAACCCTGAATTGGA...TGGGGTGTTCATGGAGATGTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTAATAGGGTTCGCCAATaGACTCCATTATGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGNRVRQ*TPLCSR
Trigger: TCGACTACATAATGGAGTCCATTGGCGAACCCTATT...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATACCAAGCTTGGTGACTaGCTTAATAAGTCTCCTACC +
Preference number: 4 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHTKLGD*LNKSPT
Trigger: GGTAGGAGACTTATTAAGCCAGTCACCAAGCTTGGT...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp TTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATCACAGCAGCACTGTTaGCATGGTCTGCAATGCTGT +
Preference number: 4 (lower is better)
Translates to: FSSEVLGHPFGLSNKVSQSQQHC*HGLQCC
Trigger: ACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGA...TTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529340.5
CDS-3UTR TCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTCTGGACAGCTGGAAGTaGGCTTCTCCATCATTTTCT +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSLDSWK*ASPSFS
Trigger: AGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAG...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCCTGGACAGCTGGAAGTaGGCTTCTCCATCATTTTCT +
Preference number: 4 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPLDSWK*ASPSFS
Trigger: AGAAAATGATGGAGAAGCTCACTTCCAGCTGTCCAG...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTCACTTCAATCCCACTTaGACATCAGTAGCCACTATC +
Preference number: 4 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSHFNPT*TSVATI
Trigger: GATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTG...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp AATGGAGTCAAGTTGGTGACCACTAAGGTTGAAAGATTCATGGCTGGGATGGGAGATAACAAAGGCTTCTaGACTCTTATTCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: NGVKLVTTKVERFMAGMGDNKGF*TLILFL
Trigger: GAGGAAAAGAATAAGAGTTCAGAAGCCTTTGTTATC...TCCCATCCCAGCCATGAATCTTTCAACCTTAGTGGTCACCAACTTGACTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCCTCCTCACTAGGCCCTaGTTTCGCTATCTGATAACA +
Preference number: 4 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPLLTRP*FRYLIT
Trigger: TGTTATCAGATAGCGAAATCAGGGCCTAGTGAGGAG...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp CTAAGTTGGTGGGCTGAAAGGATAGCCAATTTGGGATGGAAGAGTGGGGTAATATTTTGGAAGAGAAGTTaGGCCTCTTGCATTTTCTTA +
Preference number: 4 (lower is better)
Translates to: LSWWAERIANLGWKSGVIFWKRS*ASCIFL
Trigger: TAAGAAAATGCAAGAGGCTCAACTTCTCTTCCAAAA...TATTACCCCACTCTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTAGGGCACAAGATCTTTaGGGTGTTAGAAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSRAQDL*GVRRQA
Trigger: AGCCTGTCTTCTAACACCTCAAAGATCTTGTGCCCT...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACAGCTAAGTTGGTGGGCTaGAAGGATAGCCAATTTGGG +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTAKLVG*KDSQFG
Trigger: CCCAAATTGGCTATCCTTTCAGCCCACCAACTTAGC...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTTACCAATACCAAGTGTaGGCTTCAAATACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFYQYQV*ASNTGL
Trigger: GAGGCCTGTATTTGAAGCTCACACTTGGTATTGGTA...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp AATGGAGTCAAGTTGGTGACCACTAAGGTTGAAAGATTCATGGCTGGGATGGGAACTACAGTAAGTACATaGTTTCCCAAGGGTATCATT +
Preference number: 4 (lower is better)
Translates to: NGVKLVTTKVERFMAGMGTTVST*FPKGII
Trigger: AATGATACCCTTGGGAAATCATGTACTTACTGTAGT...TCCCATCCCAGCCATGAATCTTTCAACCTTAGTGGTCACCAACTTGACTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp CTAAGTTGGTGGGCTGAAAGGATAGCCAATTTGGGATGGAAGAGTGGGGTAATACTTTCAGCAGAAAAATaGAAGATGGACATGGTTGTT +
Preference number: 4 (lower is better)
Translates to: LSWWAERIANLGWKSGVILSAEK*KMDMVV
Trigger: AACAACCATGTCCATCTTTCATTTTTCTGCTGAAAG...TATTACCCCACTCTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTGAGGATTTATGCTCCTaGAGAATACTTGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFEDLCS*RILVLW
Trigger: CCACAGCACAAGTATTCTTCAGGAGCATAAATCCTC...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp AACATTCACAGCAGCACTGTTGACATGGTCTGCAATGCTGTCAATCTTCTCCTGTACTATTTCCTCAACTaGATTAGGCAGTACTTCTCA +
Preference number: 4 (lower is better)
Translates to: NIHSSTVDMVCNAVNLLLYYFLN*IRQYFS
Trigger: TGAGAAGTACTGCCTAATTCAGTTGAGGAAATAGTA...CAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529340.5
CDS-3UTR TCA 90 bp TCATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTATGAAAAATTGTGAATaGAGGGGCCGGGTACGGTGG +
Preference number: 4 (lower is better)
Translates to: SFSSEVLGHPFGLSNKVSMKNCE*RGRVRW
Trigger: CCACCGTACCCGGCCCCTTCATTCACAATTTTTCAT...AGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531035.5
CDS-3UTR GCA 90 bp CACCAACAGTCATGGATCTGGTCAAAGGAGGCTGTAGCAAAGTTTCTTCATCATTTGATATGCTCTTCATaGAACTTGTCCCAGATTCTG +
Preference number: 4 (lower is better)
Translates to: HQQSWIWSKEAVAKFLHHLICSS*NLSQIL
Trigger: CAGAATCTGGGACAAGTTGCATGAAGAGCATATCAA...ATGATGAAGAAACTTTGCTACAGCCTCCTTTGACCAGATCCATGACTGTTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525342.5
ENST00000529340.5
CDS-3UTR GCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTCGTCCTGCATTGATATaGTCTTCATGCAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFRPALI*SSCNLS
Trigger: GGACAAGTTGCATGAAGAGCATATCAATGCAGGACG...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTCGTCCTGCATTGATATaGTCTTCATGCAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSRPALI*SSCNLS
Trigger: GGACAAGTTGCATGAAGAGCATATCAATGCAGGACG...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATCTGAACTGTACGTCCTaGATTGATATGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHLNCTS*IDMLFM
Trigger: CATGAAGAGCATATCAATGCAGGACGTACAGTTCAG...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TTTCCTTCACCAGAAGATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGCTGAACTGTACGTCCTaGATTGATATGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: FPSPEDIVGPNCNRVRQWLNCTS*IDMLFM
Trigger: CATGAAGAGCATATCAATGCAGGACGTACAGTTCAG...CCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATCTTCTGGTGAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp ACAAAGTTTCTCAATTTCTCGGATATTGGATCGGAGTTGCTCAGCCTCCCAAAGTTCAGTAGTATGAAATaGTCCACCAACAGTCATGGA +
Preference number: 4 (lower is better)
Translates to: TKFLNFSDIGSELLSLPKFSSMK*STNSHG
Trigger: TCCATGACTGTTGGTGGAGCATTTCATACTACTGAA...CTTTGGGAGGCTGAGCAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525342.5
CDS-3UTR GCA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATACTGTTGACATGGTCTaGAATGCTGTCAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHTVDMV*NAVNLL
Trigger: GAGAAGATTGACAGCATTGCAGACCATGTCAACAGT...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp AACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTTATGTAGTCGACCTGTaGTCCTCACTAGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: NPTFLHISSPYQSYRFSFYVVDL*SSLGPD
Trigger: ATCAGGGCCTAGTGAGGAGCACAGGTCGACTACATA...AAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTGGTCTGAGTCTTGCATaGGTCTTTGTCCATCATTGT +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFGLSLA*VFVHHC
Trigger: ACAATGATGGACAAAGACGCATGCAAGACTCAGACC...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp TTTCCTTCACCAGAAGATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGGTAGAAGGCTGTGAATaGCAATCTAAGGGATTCGAA +
Preference number: 4 (lower is better)
Translates to: FPSPEDIVGPNCNRVRQWVEGCE*QSKGFE
Trigger: TTCGAATCCCTTAGATTGGCATTCACAGCCTTCTAC...CCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATCTTCTGGTGAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp AATGGAGTCAAGTTGGTGACCACTAAGGTTGAAAGATTCATGGCTGGGATGGGACCTTTCCAGGTCTGTTaGGATTACTATCTTAATGAA +
Preference number: 4 (lower is better)
Translates to: NGVKLVTTKVERFMAGMGPFQVC*DYYLNE
Trigger: TTCATTAAGATAGTAATCCCAACAGACCTGGAAAGG...TCCCATCCCAGCCATGAATCTTTCAACCTTAGTGGTCACCAACTTGACTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp TTCAGTAGTATGAAATGCTCCACCAACAGTCATGGATCTGGTCAAAGGAGGCTGCCTTTCCAGGTCTGTTaGGATTACTATCTTAATGAA +
Preference number: 4 (lower is better)
Translates to: FSSMKCSTNSHGSGQRRLPFQVC*DYYLNE
Trigger: TTCATTAAGATAGTAATCCCAACAGACCTGGAAAGG...CAGCCTCCTTTGACCAGATCCATGACTGTTGGTGGAGCATTTCATACTACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525342.5
CDS-3UTR CCA 90 bp TTTCCTTCACCAGAAGATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGCAATTTCTCGGATATTaGATCGGAGTTGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: FPSPEDIVGPNCNRVRQWQFLGY*IGVAEL
Trigger: CAGTTCAGCAACTCCGATCCAATATCCGAGAAATTG...CCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATCTTCTGGTGAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp CCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACCAACAGTCATGGATCTaGTCAAAGGAGGCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: PTFLHISSPYQSYRFSFHQQSWI*SKEAVA
Trigger: TGCTACAGCCTCCTTTGACCAGATCCATGACTGTTG...GTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp CCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACGCAGCACTGTTGACATaGTCTGCAATGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: PTFLHISSPYQSYRFSFHAALLT*SAMLSI
Trigger: GATTGACAGCATTGCAGACCATGTCAACAGTGCTGC...GTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACATTGGCTGGGAAGATCTaGACAGCTGGAAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTLAGKI*TAGSEL
Trigger: AAGCTCACTTCCAGCTGTCCAGATCTTCCCAGCCAA...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp AACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTTCTTGTCAGTTTGGCTaGGAAGATCTGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: NPTFLHISSPYQSYRFSFSCQFG*EDLDSW
Trigger: CCAGCTGTCCAGATCTTCCCAGCCAAACTGACAAGA...AAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCCAGATACCCCCTATCTaGCAGATATATCACCCCTCA +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFQIPPI*QIYHPS
Trigger: TGAGGGGTGATATATCTGCCAGATAGGGGGTATCTG...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp AATGGAGTCAAGTTGGTGACCACTAAGGTTGAAAGATTCATGGCTGGGATGGGATGGATACATACCATGTaGATCCTTTACATTGATGGT +
Preference number: 4 (lower is better)
Translates to: NGVKLVTTKVERFMAGMGWIHTM*ILYIDG
Trigger: ACCATCAATGTAAAGGATCCACATGGTATGTATCCA...TCCCATCCCAGCCATGAATCTTTCAACCTTAGTGGTCACCAACTTGACTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTTTGAGAGTAGCAATGTaGATACATACCATGTGGATC +
Preference number: 4 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGLRVAM*IHTMWI
Trigger: GATCCACATGGTATGTATCCACATTGCTACTCTCAA...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp GATCTATCATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTCCACCAACAGTCATaGATCTGGTCAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: DLSFSSEVLGHPFGLSNKVHQQS*IWSKEA
Trigger: AGCCTCCTTTGACCAGATCCATGACTGTTGGTGGAC...TTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAATGATAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529340.5
CDS-3UTR CCA 90 bp TCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTAGTTCATGGCCAGCCTaGGCAACATGCCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: SSEVLGHPFGLSNKVSQFSSWPA*ATCQNP
Trigger: GGGATTTTGGCATGTTGCCCAGGCTGGCCATGAACT...AAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531035.5
CDS-3UTR TCA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCCTGTACGTCCTGCATTaGTATGCTCTTCATGCAACT +
Preference number: 4 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFLYVLH*YALHAT
Trigger: AGTTGCATGAAGAGCATATCAATGCAGGACGTACAG...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp TCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGGCTGTACGTCCTGCATTaGTATGCTCTTCATGCAACT +
Preference number: 4 (lower is better)
Translates to: SSFRTFKQSFSISRILDRLYVLH*YALHAT
Trigger: AGTTGCATGAAGAGCATATCAATGCAGGACGTACAG...CCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR TCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCTCAGCTTCAGTAGTATaGAATGCTCCACCAACAGTC +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFSASVV*NAPPTV
Trigger: GACTGTTGGTGGAGCATTTCATACTACTGAAGCTGA...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCTCAATCTTCTCCTGCTaGGAATTCACTAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFSIFSC*EFTRRE
Trigger: CTCTCTCCTAGTGAATTCTCAGCAGGAGAAGATTGA...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTCAATCTTCTCCTGCTaGGAATTCACTAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSSIFSC*EFTRRE
Trigger: CTCTCTCCTAGTGAATTCTCAGCAGGAGAAGATTGA...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTCTCTTAACATCTCCATaGACACCCCAGCAAACAACA +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSLLTSP*TPQQTT
Trigger: TGTTGTTTGCTGGGGTGTTCATGGAGATGTTAAGAG...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTTACAGCCAAAAGGTTTaGAAGTCTCTGCTCTACAGA +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFYSQKV*KSLLYR
Trigger: TCTGTAGAGCAGAGACTTTCAAACCTTTTGGCTGTA...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTTTGGTTTCTGCACTCTaGTGGAAGACAAACGTTGTA +
Preference number: 4 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSLVSAL*WKTNVV
Trigger: TACAACGTTTGTCTTCCATCAGAGTGCAGAAACCAA...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACATTCGTTAAGTACCTGTaGACCACAGCCACGTTCTAC +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTFVKYL*TTATFY
Trigger: GTAGAACGTGGCTGTGGTTCACAGGTACTTAACGAA...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp CTTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGGAGTTGCTGAACTGCTCAAAGGGAAGCTGTaGAGTAAGGAAATTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LSNKVSQFLGYWIGVAELLKGKL*SKEIPS
Trigger: TGAGGGAATTTCCTTACTTCACAGCTTCCCTTTGAG...CAGTTCAGCAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529340.5
CDS-3UTR TCA 90 bp GGATCTATCATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAACTTTATGAAAAATTGTaGATGAAGGGGCCGGGTACG +
Preference number: 4 (lower is better)
Translates to: GSIILFRSTRSSFRTFKQLYEKL*MKGPGT
Trigger: CGTACCCGGCCCCTTCATTCACAATTTTTCATAAAG...TTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAATGATAGATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531035.5
CDS-3UTR GCA 90 bp AGCTTCAGTAGTATGAAATGCTCCACCAACAGTCATGGATCTGGTCAAAGGAGGTCAATATTTATCTGGTaGTTTCTTAACCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SFSSMKCSTNSHGSGQRRSIFIW*FLNLSR
Trigger: CCTGGAAAGGTTAAGAAAGCACCAGATAAATATTGA...CCTCCTTTGACCAGATCCATGACTGTTGGTGGAGCATTTCATACTACTGAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525342.5
CDS-3UTR GCA 90 bp TCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGGCGTCCTGCATTGATATaGTCTTCATGCAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: SSFRTFKQSFSISRILDRRPALI*SSCNLS
Trigger: GGACAAGTTGCATGAAGAGCATATCAATGCAGGACG...CCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR GCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCTCCAGGGAGAAAATCTaGTCCTTGGCAGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPSREKI*SLAVFK
Trigger: TTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGA...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTCCAGGGAGAAAATCTaGTCCTTGGCAGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSSREKI*SLAVFK
Trigger: TTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGA...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTAAGTTTCTGGACTCATaGAATTCTCCCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSKFLDS*NSPCTA
Trigger: TGCTGTACAGGGAGAATTGCATGAGTCCAGAAACTT...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp TCTTCAACATTCACAGCAGCACTGTTGACATGGTCTGCAATGCTGTCAATCTTCTCTACAGATTCCAAATaGAGTTGGAGAAATTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSTFTAALLTWSAMLSIFSTDSK*SWRNSA
Trigger: AGCAGAATTTCTCCAACTCCATTTGGAATCTGTAGA...GAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR CCA 90 bp AGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATACAACAGTCATGGATCTaGTCAAAGGAGGCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: STRSSFRTFKQSFSISRIQQSWI*SKEAVA
Trigger: TGCTACAGCCTCCTTTGACCAGATCCATGACTGTTG...TATCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525342.5
ENST00000529340.5
CDS-3UTR CCA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATAAGTCAGTGACCAGTTaGCTAAGTTCAATTAAGTCC +
Preference number: 4 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHKSVTS*LSSIKS
Trigger: GGACTTAATTGAACTTAGCCAACTGGTCACTGACTT...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTGATTCGAACTTTATTTaGTATTCAGTGGGAACCACT +
Preference number: 4 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGDSNFI*YSVGTT
Trigger: AGTGGTTCCCACTGAATACCAAATAAAGTTCGAATC...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp GGATCTATCATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAACAATTTCTCGGATATTaGATCGGAGTTGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GSIILFRSTRSSFRTFKQQFLGY*IGVAQP
Trigger: AGGCTGAGCAACTCCGATCCAATATCCGAGAAATTG...TTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAATGATAGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525342.5
CDS-3UTR TCA 90 bp TCATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCTGTACGTCCTGCATTaGTATGCTCTTCATGCAACT +
Preference number: 4 (lower is better)
Translates to: SFSSEVLGHPFGLSNKVSLYVLH*YALHAT
Trigger: AGTTGCATGAAGAGCATATCAATGCAGGACGTACAG...AGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR TCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACATCAGCTTCAGTAGTATaGAATGCTCCACCAACAGTC +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTSASVV*NAPPTV
Trigger: GACTGTTGGTGGAGCATTTCATACTACTGAAGCTGA...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp TTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATCAGCTTCAGTAGTATaGAATGCTCCACCAACAGTC +
Preference number: 4 (lower is better)
Translates to: FSSEVLGHPFGLSNKVSQSASVV*NAPPTV
Trigger: GACTGTTGGTGGAGCATTTCATACTACTGAAGCTGA...TTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525342.5
CDS-3UTR TCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACATCAATCTTCTCCTGCTaGGAATTCACTAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTSIFSC*EFTRRE
Trigger: CTCTCTCCTAGTGAATTCTCAGCAGGAGAAGATTGA...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACACACTTCAATCCCACTTaGACATCAGTAGCCACTATC +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTHFNPT*TSVATI
Trigger: GATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTG...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACACTCTTAACATCTCCATaGACACCCCAGCAAACAACA +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTLLTSP*TPQQTT
Trigger: TGTTGTTTGCTGGGGTGTTCATGGAGATGTTAAGAG...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCAATTACCCCTGGAACTaGGGTTTAGGAATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPNYPWN*GLGILL
Trigger: AAGCAAGATTCCTAAACCTCAGTTCCAGGGGTAATT...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp CCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACCTGCCTTTATCCAAATaGGGGCCCACAAATTTTAAG +
Preference number: 4 (lower is better)
Translates to: PTFLHISSPYQSYRFSFHLPLSK*GPTNFK
Trigger: CTTAAAATTTGTGGGCCCTCATTTGGATAAAGGCAG...GTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTGTTGTAGCTATTGCCTaGTTTGGAATGTTGAAGCTA +
Preference number: 4 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSVVAIA*FGMLKL
Trigger: TAGCTTCAACATTCCAAATCAGGCAATAGCTACAAC...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTTCAATATTTATCTGGTaGTTTCTTAACCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGSIFIW*FLNLSR
Trigger: CCTGGAAAGGTTAAGAAAGCACCAGATAAATATTGA...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp AGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGCTGAACTGTACGTCCTaGATTGATATGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: RSTRSSFRTFKQSFSISRLNCTS*IDMLFM
Trigger: CATGAAGAGCATATCAATGCAGGACGTACAGTTCAG...CCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR GCA 90 bp CTTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGGAGTTGCTGAACTGCTGAACTGTACGTCCTaGATTGATATGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: LSNKVSQFLGYWIGVAELLNCTS*IDMLFM
Trigger: CATGAAGAGCATATCAATGCAGGACGTACAGTTCAG...CAGTTCAGCAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529340.5
ENST00000531035.5
CDS-3UTR GCA 90 bp CCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACACTGTTGACATGGTCTaGAATGCTGTCAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: PTFLHISSPYQSYRFSFHTVDMV*NAVNLL
Trigger: GAGAAGATTGACAGCATTGCAGACCATGTCAACAGT...GTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCACTGTTGACATGGTCTaGAATGCTGTCAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFTVDMV*NAVNLL
Trigger: GAGAAGATTGACAGCATTGCAGACCATGTCAACAGT...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCATAGTTGGACCAAATTaGAATAGGGTTCGCCAATGG +
Preference number: 4 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFIVGPN*NRVRQW
Trigger: CCATTGGCGAACCCTATTGCAATTTGGTCCAACTAT...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTATAGTTGGACCAAATTaGAATAGGGTTCGCCAATGG +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSIVGPN*NRVRQW
Trigger: CCATTGGCGAACCCTATTGCAATTTGGTCCAACTAT...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTCAATTTCTCGGATATTaGATCGGAGTTGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSQFLGY*IGVAEL
Trigger: CAGTTCAGCAACTCCGATCCAATATCCGAGAAATTG...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCCAATTTCTCGGATATTaGATCGGAGTTGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: GHPFGLSNKVSQFLGYWIQFLGY*IGVAEL
Trigger: CAGTTCAGCAACTCCGATCCAATATCCGAGAAATTG...GATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529340.5
ENST00000531035.5
CDS-3UTR CCA 90 bp TTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGGAGTTGCTCAATTTCTCGGATATTaGATCGGAGTTGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: FGLSNKVSQFLGYWIGVAQFLGY*IGVAEL
Trigger: CAGTTCAGCAACTCCGATCCAATATCCGAGAAATTG...AGCAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529340.5
ENST00000531035.5
CDS-3UTR CCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACAACCAAGCTTGGTGACTaGCTTAATAAGTCTCCTACC +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTTKLGD*LNKSPT
Trigger: GGTAGGAGACTTATTAAGCCAGTCACCAAGCTTGGT...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTATAGCCAATTTGGGATaGAAGAGTGGGGTAATATGC +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSIANLG*KSGVIC
Trigger: GCATATTACCCCACTCTTCCATCCCAAATTGGCTAT...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCACAGAAGGAAGTTTCTaGACTCATGCAATTCTCCCT +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFTEGSF*THAILP
Trigger: AGGGAGAATTGCATGAGTCCAGAAACTTCCTTCTGT...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTAGCTATTGCCTGATTTaGAATGTTGAAGCTAGTCTG +
Preference number: 4 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSSYCLI*NVEASL
Trigger: CAGACTAGCTTCAACATTCCAAATCAGGCAATAGCT...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCTTGATATGCTCTTCATaGAACTTGTCCCAGATTCTG +
Preference number: 4 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPLICSS*NLSQIL
Trigger: CAGAATCTGGGACAAGTTGCATGAAGAGCATATCAA...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCGTCCTGCATTGATATaGTCTTCATGCAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: SSEVLGHPFGLSNKVSQFRPALI*SSCNLS
Trigger: GGACAAGTTGCATGAAGAGCATATCAATGCAGGACG...AAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR GCA 90 bp GATCTATCATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAACTGAACTGTACGTCCTaGATTGATATGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: DLSFSSEVLGHPFGLSNKLNCTS*IDMLFM
Trigger: CATGAAGAGCATATCAATGCAGGACGTACAGTTCAG...TTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAATGATAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR GCA 90 bp CCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACTTCAGTAGTATGAAATaGTCCACCAACAGTCATGGA +
Preference number: 4 (lower is better)
Translates to: PTFLHISSPYQSYRFSFHFSSMK*STNSHG
Trigger: TCCATGACTGTTGGTGGAGCATTTCATACTACTGAA...GTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCTTCAGTAGTATGAAATaGTCCACCAACAGTCATGGA +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFFSSMK*STNSHG
Trigger: TCCATGACTGTTGGTGGAGCATTTCATACTACTGAA...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATGATACTAAGAAATGGTaGTGTTTCACTGGATTTCAT +
Preference number: 4 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHDTKKW*CFTGFH
Trigger: ATGAAATCCAGTGAAACAGCACCATTTCTTAGTATC...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACACCTGAAGAATACTTGTaGTGTGGCTATCAAATGCAC +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTPEEYL*CGYQMH
Trigger: GTGCATTTGATAGCCACAGCACAAGTATTCTTCAGG...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTAAGCTTTACAGAGTTTaGAGAAATTCTTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFKLYRV*RNSCHW
Trigger: CCAATGGCAAGAATTTCTGCAAACTCTGTAAAGCTT...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTTCTACAGATTCCAAATaGAGTTGGAGAAATTCTGCT +
Preference number: 4 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFSTDSK*SWRNSA
Trigger: AGCAGAATTTCTCCAACTCCATTTGGAATCTGTAGA...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCCCTTCCCTAAGTTTTTaGTTCCCTCTTCAACATTCA +
Preference number: 4 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPPSLSF*FPLQHS
Trigger: TGAATGTTGAAGAGGGAACCAAAAACTTAGGGAAGG...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp TCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGGAGTTGCTGAACTGTACCCTTCCCTAAGTTTTTaGTTCCCTCTTCAACATTCA +
Preference number: 4 (lower is better)
Translates to: SNKVSQFLGYWIGVAELYPSLSF*FPLQHS
Trigger: TGAATGTTGAAGAGGGAACCAAAAACTTAGGGAAGG...GTACAGTTCAGCAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529340.5
CDS-3UTR CCA 90 bp AACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTAATAGGGTTCGCCAATaGACTCCATTATGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: NPTFLHISSPYQSYRFSFNRVRQ*TPLCSR
Trigger: TCGACTACATAATGGAGTCCATTGGCGAACCCTATT...AAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCGATAACAAAGGCTTCTaGACTCTTATTCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPDNKGF*TLILFL
Trigger: GAGGAAAAGAATAAGAGTTCAGAAGCCTTTGTTATC...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCTTTTGGAAGAGAAGTTaGGCCTCTTGCATTTTCTTA +
Preference number: 4 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFFWKRS*ASCIFL
Trigger: TAAGAAAATGCAAGAGGCTCAACTTCTCTTCCAAAA...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR TCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACAATTTATAATTTCAGCTaGCTATGCTGGACGGGTGAT +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTIYNFS*LCWTGD
Trigger: ATCACCCGTCCAGCATAGTCAGCTGAAATTATAAAT...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp CCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACGACACAGCAGAATCTTaGTGTAACTGTTTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: PTFLHISSPYQSYRFSFHDTAES*CNCFLD
Trigger: ATCTAAGAAACAGTTACATCAAGATTCTGCTGTGTC...GTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR TCA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCGCAAATTATTTTCTCTaGAGCCCAGTTTCCTTACTT +
Preference number: 4 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFANYFL*SPVSLL
Trigger: AAGTAAGGAAACTGGGCTTCAGAGAAAATAATTTGC...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR GCA 90 bp AACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTTTGATATGCTCTTCATaGAACTTGTCCCAGATTCTG +
Preference number: 4 (lower is better)
Translates to: NPTFLHISSPYQSYRFSFLICSS*NLSQIL
Trigger: CAGAATCTGGGACAAGTTGCATGAAGAGCATATCAA...AAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp TCATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTTTGATATGCTCTTCATaGAACTTGTCCCAGATTCTG +
Preference number: 4 (lower is better)
Translates to: SFSSEVLGHPFGLSNKVSLICSS*NLSQIL
Trigger: CAGAATCTGGGACAAGTTGCATGAAGAGCATATCAA...AGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR GCA 90 bp ATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCATTGATATGCTCTTCATaGAACTTGTCCCAGATTCTG +
Preference number: 4 (lower is better)
Translates to: ILFRSTRSSFRTFKQSFSLICSS*NLSQIL
Trigger: CAGAATCTGGGACAAGTTGCATGAAGAGCATATCAA...TGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR GCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACATTCAGTAGTATGAAATaGTCCACCAACAGTCATGGA +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTFSSMK*STNSHG
Trigger: TCCATGACTGTTGGTGGAGCATTTCATACTACTGAA...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR GCA 90 bp CCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACTTCCGTTGTAGCTATTaGCTGATTTGGAATGTTGAA +
Preference number: 4 (lower is better)
Translates to: PTFLHISSPYQSYRFSFHFRCSY*LIWNVE
Trigger: TTCAACATTCCAAATCAGGCAATAGCTACAACGGAA...GTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTATCTTAATGAATTTCTaGATAGCTGGTTCAAGACGG +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSILMNF*IAGSRR
Trigger: CCGTCTTGAACCAGCTATCCAGAAATTCATTAAGAT...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCCCTTTCCAGGTCTGTTaGGATTACTATCTTAATGAA +
Preference number: 4 (lower is better)
Translates to: TLQSHLNISSHYLDILVFPFQVC*DYYLNE
Trigger: TTCATTAAGATAGTAATCCCAACAGACCTGGAAAGG...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp AGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGCCTTTCCAGGTCTGTTaGGATTACTATCTTAATGAA +
Preference number: 4 (lower is better)
Translates to: RSTRSSFRTFKQSFSISRPFQVC*DYYLNE
Trigger: TTCATTAAGATAGTAATCCCAACAGACCTGGAAAGG...CCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR CCA 90 bp GGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCTCTACAGATTCCAAATaGAGTTGGAGAAATTCTGCT +
Preference number: 4 (lower is better)
Translates to: GHPFGLSNKVSQFLGYWISTDSK*SWRNSA
Trigger: AGCAGAATTTCTCCAACTCCATTTGGAATCTGTAGA...GATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525342.5
ENST00000529340.5
CDS-3UTR CCA 90 bp ATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAAAGTCAGTGACCAGTTaGCTAAGTTCAATTAAGTCC +
Preference number: 4 (lower is better)
Translates to: ILFRSTRSSFRTFKQSFSKSVTS*LSSIKS
Trigger: GGACTTAATTGAACTTAGCCAACTGGTCACTGACTT...TGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529340.5
CDS-3UTR CCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTCCAATTCAGGGTTATaGAAGAAACTAGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSSNSGL*KKLVFH
Trigger: ATGGAAGACTAGTTTCTTCCATAACCCTGAATTGGA...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp CCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACTCCAATTCAGGGTTATaGAAGAAACTAGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: PTFLHISSPYQSYRFSFHSNSGL*KKLVFH
Trigger: ATGGAAGACTAGTTTCTTCCATAACCCTGAATTGGA...GTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTATTCCTCATTATACATaGGTAGAATTCACCCCAGAA +
Preference number: 4 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSIPHYT*VEFTPE
Trigger: TTCTGGGGTGAATTCTACCCATGTATAATGAGGAAT...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
3UTR CAA 72 bp GAAGCCAGAAGATTTTTGGAAGAGAAGTTGAGCCTCTaGCATTTTCTTACATCATTAATTTCCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: EARRFLEEKLSL*HFLTSLISFTR
Trigger: TCTGGTGAAGGAAATTAATGATGTAAGAAAATGCAAGAGGCTCAACTTCTCTTCCAAAAATCTTCTGGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACAATCTTAATGAATTTCTaGATAGCTGGTTCAAGACGG +
Preference number: 4 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTILMNF*IAGSRR
Trigger: CCGTCTTGAACCAGCTATCCAGAAATTCATTAAGAT...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CCA 90 bp AGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATAATCTTAATGAATTTCTaGATAGCTGGTTCAAGACGG +
Preference number: 4 (lower is better)
Translates to: STRSSFRTFKQSFSISRIILMNF*IAGSRR
Trigger: CCGTCTTGAACCAGCTATCCAGAAATTCATTAAGAT...TATCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR CCA 90 bp TCATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCCTTTCCAGGTCTGTTaGGATTACTATCTTAATGAA +
Preference number: 4 (lower is better)
Translates to: SFSSEVLGHPFGLSNKVSPFQVC*DYYLNE
Trigger: TTCATTAAGATAGTAATCCCAACAGACCTGGAAAGG...AGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR CCA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCATGGTGCTGTTTCACTaGATTTCATTGATGAGATTT +
Preference number: 4 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPMVLFH*ISLMRF
Trigger: AAATCTCATCAATGAAATCCAGTGAAACAGCACCAT...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CCA 90 bp TCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTATCTTAATGAATTTCTaGATAGCTGGTTCAAGACGG +
Preference number: 4 (lower is better)
Translates to: SSEVLGHPFGLSNKVSQFILMNF*IAGSRR
Trigger: CCGTCTTGAACCAGCTATCCAGAAATTCATTAAGAT...AAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR CCA 90 bp AACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTAATGTTTCTGACTTATaGAAGAGATACCGAATTTGG +
Preference number: 4 (lower is better)
Translates to: NPTFLHISSPYQSYRFSFNVSDL*KRYRIW
Trigger: CCAAATTCGGTATCTCTTCCATAAGTCAGAAACATT...AAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525640.5
3UTR CAA 72 bp TATTGCACAGATATATTTCTTATCTCCCATTTCTATTaGAGAGTAGCAATGTGGATACATACCATGTGGATC +
Preference number: 4 (lower is better)
Translates to: YCTDIFLISHFY*RVAMWIHTMWI
Trigger: GATCCACATGGTATGTATCCACATTGCTACTCTCAAATAGAAATGGGAGATAAGAAATATATCTGTGCAATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS CCA 90 bp GAACGGATGCGCGGGTCTGTCCCGGGACCCAGACGCCAGCGACCCTaGCGACCCGGGGCCTACAGCGCGCCAGAGACAGGACGCGCGCCG +
Preference number: 5 (lower is better)
Translates to: ERMRGSVPGPRRQRP*RPGAYSAPETGRAP
Trigger: CGGCGCGCGTCCTGTCTCTGGCGCGCTGTAGGCCCCGGGTCGCCAGGGTCGCTGGCGTCTGGGTCCCGGGACAGACCCGCGCATCCGTTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS GCA 90 bp GCTCGCACTTCGGATCCAATGCCCTACTTGCCGCCCAGCGCCTCTTaGGCGCGCCACACGGGCGCCAGGCCCACCAAGCCTGTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: ARTSDPMPYLPPSAS*ARHTGARPTKPVRA
Trigger: GGCCCTCACAGGCTTGGTGGGCCTGGCGCCCGTGTGGCGCGCGCAAGAGGCGCTGGGCGGCAAGTAGGGCATTGGATCCGAAGTGCGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS GCA 90 bp GGAGGAGCCACCATGGCGCTCGCACTTCGGATCCAATGCCCTACTTaGCGCCCAGCGCCTCTTGCGCGCGCCACACGGGCGCCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: GGATMALALRIQCPT*RPAPLARATRAPGP
Trigger: TGGGCCTGGCGCCCGTGTGGCGCGCGCAAGAGGCGCTGGGCGGCAAGTAGGGCATTGGATCCGAAGTGCGAGCGCCATGGTGGCTCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS GCA 90 bp AAAAACCTGGGCCACACACACCAAACGCCCCCACCAGCGAACGGATaGGCGGGTCTGTCCCGGGACCCAGACGCCAGCGACCCTGGCGAC +
Preference number: 5 (lower is better)
Translates to: KNLGHTHQTPPPANG*AGLSRDPDASDPGD
Trigger: GTCGCCAGGGTCGCTGGCGTCTGGGTCCCGGGACAGACCCGCGCATCCGTTCGCTGGTGGGGGCGTTTGGTGTGTGTGGCCCAGGTTTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526607.1
CDS CCA 90 bp CTAAAAGGAGGGAGCCAAGGTGTGGGACCTTCTGCCAACCACCTCTaGGTTTGGCGAGCAGGGGCTTCCGGCCTCTCGCTCCCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: LKGGSQGVGPSANHL*VWRAGASGLSLPVL
Trigger: GAGGACTGGGAGCGAGAGGCCGGAAGCCCCTGCTCGCCAAACCCAGAGGTGGTTGGCAGAAGGTCCCACACCTTGGCTCCCTCCTTTTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS CCA 90 bp ACCAAGCGAGGCTCCGCCACTTCTGAAAAACAGGAGGAGCCACCATaGCGCTCGCACTTCGGATCCAATGCCCTACTTGCCGCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: TKRGSATSEKQEEPP*RSHFGSNALLAAQR
Trigger: GCGCTGGGCGGCAAGTAGGGCATTGGATCCGAAGTGCGAGCGCCATGGTGGCTCCTCCTGTTTTTCAGAAGTGGCGGAGCCTCGCTTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS GCA 90 bp GAACCTCGGTTAGCTAAAAGGAGGGAGCCAAGGTGTGGGACCTTCTaGCAACCACCTCTGGGTTTGGCGAGCAGGGGCTTCCGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: EPRLAKRREPRCGTF*QPPLGLASRGFRPL
Trigger: GAGAGGCCGGAAGCCCCTGCTCGCCAAACCCAGAGGTGGTTGGCAGAAGGTCCCACACCTTGGCTCCCTCCTTTTAGCTAACCGAGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp TGCAAGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACTTCACAGCAGCACTGTaGACATGGTCTGCAATGCTG +
Preference number: 5 (lower is better)
Translates to: CKEANRTPYHSPDECTCHFTAAL*TWSAML
Trigger: CAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAA...GTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR CAA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCGCAATTCCTGCCACTTaGAAGCCTGCAAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTAIPAT*KPARRP
Trigger: TGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGC...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp AAGGAGGCCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACAGGCTGCCAGCTTGTATTTaGCAGCCTTCCCTAAGTTTT +
Preference number: 5 (lower is better)
Translates to: KEANRTPYHSPDECTCHRLPACI*QPSLSF
Trigger: AAAACTTAGGGAAGGCTGCAAAATACAAGCTGGCAG...CCTGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGGCCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR CAA 90 bp GTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAGAGATAGACATGCAGTaGGGCTGGGCCATGCTTGCT +
Preference number: 5 (lower is better)
Translates to: VTECPTAAKVLRIDMLAPEIDMQ*GWAMLA
Trigger: AGCAAGCATGGCCCAGCCCAACTGCATGTCTATCTC...TGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CAA 90 bp AGTGCAGCTGCAATTCCTGCCACTTTGAAGCCTGCAAGGAGGCCAATAGGACCCTTCACAGCAGCACTGTaGACATGGTCTGCAATGCTG +
Preference number: 5 (lower is better)
Translates to: SAAAIPATLKPARRPIGPFTAAL*TWSAML
Trigger: CAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAA...GGGTCCTATTGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGCAGCTGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR CAA 90 bp CCAATAGGACCCCCTACCATTCCCCCGATGAGTGCACCTGCCACAGGCAGAGCTCCAGATTCTGCACCTTaGATACTATTTCCTCAACTG +
Preference number: 5 (lower is better)
Translates to: PIGPPTIPPMSAPATGRAPDSAP*ILFPQL
Trigger: CAGTTGAGGAAATAGTATCAAAGGTGCAGAATCTGG...AGCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATGGTAGGGGGTCCTATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529340.5
CDS TCA 90 bp AATGCTGTCAATCTTCTCCTGCTGAGACTAGATGCAAAGGAATTATaGGTGAGCGGTCCTGCTGGGGAGCAGCAGGGAGCCAACACACAC +
Preference number: 5 (lower is better)
Translates to: NAVNLLLLRLDAKEL*VSGPAGEQQGANTH
Trigger: GTGTGTGTTGGCTCCCTGCTGCTCCCCAGCAGGACCGCTCACTCATAATTCCTTTGCATCTAGTCTCAGCAGGAGAAGATTGACAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529385.1
CDS-3UTR CAA 90 bp CATTCCCCCGATGAGTGCACCTGCCACAGGCAGAGCTGCCAGCTTGTATTTTGCCTGCCAGCTTGTATTTaGCAGCCTTCCCTAAGTTTT +
Preference number: 5 (lower is better)
Translates to: HSPDECTCHRQSCQLVFCLPACI*QPSLSF
Trigger: AAAACTTAGGGAAGGCTGCAAAATACAAGCTGGCAG...GCAAAATACAAGCTGGCAGCTCTGCCTGTGGCAGGTGCACTCATCGGGGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR CAA 90 bp GTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCACTGAGTCACTTAAAGTaGGGGGAAGATCAAGTGCGG +
Preference number: 5 (lower is better)
Translates to: VTECPTAAKVLRIDMLAPLSHLK*GEDQVR
Trigger: CCGCACTTGATCTTCCCCCAACTTTAAGTGACTCAG...TGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CAA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATCAACCACCTCTGGGTTaGGCGAGCAGGGGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHQPPLG*ASRGFR
Trigger: CCGGAAGCCCCTGCTCGCCAAACCCAGAGGTGGTTG...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp TTATATACCCTCAGCCCAGGGCCTCAATCTCTTAACATCTCCATGAACACCCCAGCAATTCCTGCCACTTaGAAGCCTGCAAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: LYTLSPGPQSLNISMNTPAIPAT*KPARRP
Trigger: TGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGC...TGGGGTGTTCATGGAGATGTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp CTAAGTTGGTGGGCTGAAAGGATAGCCAATTTGGGATGGAAGAGTGGGGTAATAGCCTTAGCAGGTGGCTaGACAGGGCCTAACACTCAG +
Preference number: 5 (lower is better)
Translates to: LSWWAERIANLGWKSGVIALAGG*TGPNTQ
Trigger: CTGAGTGTTAGGCCCTGTCAAGCCACCTGCTAAGGC...TATTACCCCACTCTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CAA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCCAACCACCTCTGGGTTaGGCGAGCAGGGGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPQPPLG*ASRGFR
Trigger: CCGGAAGCCCCTGCTCGCCAAACCCAGAGGTGGTTG...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATACTGTACGTCCTGCATaGATATGCTCTTCATGCAAC +
Preference number: 5 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNTVRPA*ICSSCN
Trigger: GTTGCATGAAGAGCATATCAATGCAGGACGTACAGT...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp GTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCACGATTCTGCAGCATTTaGATCTTGAGGAATTTCAGG +
Preference number: 5 (lower is better)
Translates to: VTECPTAAKVLRIDMLAPRFCSI*ILRNFR
Trigger: CCTGAAATTCCTCAAGATCAAAATGCTGCAGAATCG...TGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATGCCTTCCCTAAGTTTTaGGTTCCCTCTTCAACATTC +
Preference number: 5 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNAFPKF*VPSSTF
Trigger: GAATGTTGAAGAGGGAACCAAAAACTTAGGGAAGGC...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp TTATATACCCTCAGCCCAGGGCCTCAATCTCTTAACATCTCCATGAACACCCCACATGGGAACGCCATTTaGGGGAAGAAACACCAGCTA +
Preference number: 5 (lower is better)
Translates to: LYTLSPGPQSLNISMNTPHGNAI*GKKHQL
Trigger: TAGCTGGTGTTTCTTCCCCAAAATGGCGTTCCCATG...TGGGGTGTTCATGGAGATGTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CAA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCGATCCAATGCCCTACTaGCCGCCCAGCGCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFDPMPY*PPSASC
Trigger: GCAAGAGGCGCTGGGCGGCAAGTAGGGCATTGGATC...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp CCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACGATCCAATGCCCTACTaGCCGCCCAGCGCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: PTFLHISSPYQSYRFSFHDPMPY*PPSASC
Trigger: GCAAGAGGCGCTGGGCGGCAAGTAGGGCATTGGATC...GTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp ATTCACAGCAGCACTGTTGACATGGTCTGCAATGCTGTCAATCTTCTCCTGCTGTGCTCTTCATGCAACTaGTCCCAGATTCTGCACCTT +
Preference number: 5 (lower is better)
Translates to: IHSSTVDMVCNAVNLLLLCSSCN*SQILHL
Trigger: AAGGTGCAGAATCTGGGACAAGTTGCATGAAGAGCA...CAGCAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR CAA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCGAGAAGTTGAGCCTCTaGCATTTTCTTACATCATTA +
Preference number: 5 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTEKLSL*HFLTSL
Trigger: TAATGATGTAAGAAAATGCAAGAGGCTCAACTTCTC...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCATCTGCAAAATGTCTTaGGAGGCAATTCTGAAAGAA +
Preference number: 5 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTICKMS*EAILKE
Trigger: TTCTTTCAGAATTGCCTCCAAAGACATTTTGCAGAT...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CAA 90 bp GGTGACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCGAAGAGATACCGAATTaGGAGAGAAAAGTCAAAGTA +
Preference number: 5 (lower is better)
Translates to: GDGVSNSSKGPQDRHVGTEEIPN*ERKVKV
Trigger: TACTTTGACTTTTCTCTCCAAATTCGGTATCTCTTC...GGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525640.5
CDS-3UTR CAA 90 bp AACATTCACAGCAGCACTGTTGACATGGTCTGCAATGCTGTCAATCTTCTCCTGGCATTTCTTGTCAGTTaGGCTGGGAAGATCTGGACA +
Preference number: 5 (lower is better)
Translates to: NIHSSTVDMVCNAVNLLLAFLVS*AGKIWT
Trigger: TGTCCAGATCTTCCCAGCCAAACTGACAAGAAATGC...CAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS TCA 90 bp TCCCTAAGTTTTTGGTTCCCTCTTCAACATTCACAGCAGCACTGTTaGCATGGTCTGCAATGCTGTCAATCTTCTCCTGCTGAGACTAGA +
Preference number: 5 (lower is better)
Translates to: SLSFWFPLQHSQQHC*HGLQCCQSSPAETR
Trigger: TCTAGTCTCAGCAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTTGAAGAGGGAACCAAAAACTTAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529385.1
CDS GCA 90 bp TTTGGTTCCCTCTTCAACATTCACAGCAGCACTGTTGACATGGTCTaGAATGCTGTCAATCTTCTCCTGCTGAGACTAGATGCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: FGSLFNIHSSTVDMV*NAVNLLLLRLDAKE
Trigger: TTCCTTTGCATCTAGTCTCAGCAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTTGAAGAGGGAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529385.1
CDS GCA 90 bp TCAATTTCTCGGATATTGGATCGGAGTTGTCAACACTGGAGACACTaGCTGTTGCCACCAGCCAAAATGGGAAAACTCTTAATTCACAGG +
Preference number: 5 (lower is better)
Translates to: SISRILDRSCQHWRH*LLPPAKMGKLLIHR
Trigger: CCTGTGAATTAAGAGTTTTCCCATTTTGGCTGGTGGCAACAGGCAGTGTCTCCAGTGTTGACAACTCCGATCCAATATCCGAGAAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525847.1
CDS-3UTR CAA 90 bp CTCTTCAACATTCACAGCAGCACTGTTGACATGGTCTGCAATGCTGTCAATCTTTGCTCTTCATGCAACTaGTCCCAGATTCTGCACCTT +
Preference number: 5 (lower is better)
Translates to: LFNIHSSTVDMVCNAVNLCSSCN*SQILHL
Trigger: AAGGTGCAGAATCTGGGACAAGTTGCATGAAGAGCA...AAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTTGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR CAA 90 bp AATGCTCCACCAACAGTCATGGATCTGGTCAAAGGAGGCTGTAGCAAAGTTTCTACTGTACGTCCTGCATaGATATGCTCTTCATGCAAC +
Preference number: 5 (lower is better)
Translates to: NAPPTVMDLVKGGCSKVSTVRPA*ICSSCN
Trigger: GTTGCATGAAGAGCATATCAATGCAGGACGTACAGT...AGAAACTTTGCTACAGCCTCCTTTGACCAGATCCATGACTGTTGGTGGAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525342.5
CDS-3UTR CAA 90 bp TTTCCTTCACCAGAAGATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGTTCACAGCAGCACTGTaGACATGGTCTGCAATGCTG +
Preference number: 5 (lower is better)
Translates to: FPSPEDIVGPNCNRVRQWFTAAL*TWSAML
Trigger: CAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAA...CCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATCTTCTGGTGAAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp TCAACATTCACAGCAGCACTGTTGACATGGTCTGCAATGCTGTCAATCTTCTCCGCCTTCCCTAAGTTTTaGGTTCCCTCTTCAACATTC +
Preference number: 5 (lower is better)
Translates to: STFTAALLTWSAMLSIFSAFPKF*VPSSTF
Trigger: GAATGTTGAAGAGGGAACCAAAAACTTAGGGAAGGC...GGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR CAA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTGCAATTCCTGCCACTTaGAAGCCTGCAAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSAIPAT*KPARRP
Trigger: TGGCCTCCTTGCAGGCTTCAAAGTGGCAGGAATTGC...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp GACGGAGTGTCCAACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATTCAGTAGCCACTATCTaGATATACTTGTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: DGVSNSSKGPQDRHVGTNSVATI*IYLCSK
Trigger: TTTGGAACACAAGTATATCAAGATAGTGGCTACTGA...ATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGTTGGACACTCCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp AATGGAGTCAAGTTGGTGACCACTAAGGTTGAAAGATTCATGGCTGGGATGGGATGTGAATGTCAGGTGTaGAGATTAGCACCACACCAT +
Preference number: 5 (lower is better)
Translates to: NGVKLVTTKVERFMAGMGCECQV*RLAPHH
Trigger: ATGGTGTGGTGCTAATCTCAACACCTGACATTCACA...TCCCATCCCAGCCATGAATCTTTCAACCTTAGTGGTCACCAACTTGACTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS GCA 90 bp CTTGGAGAAGGCTCAAATGTAGTTCCTAAACTGAACTGTACGTCCTaGATTGATATGCTCTTCATGCAACTTGTCCCAGATTCTGCACCT +
Preference number: 5 (lower is better)
Translates to: LGEGSNVVPKLNCTS*IDMLFMQLVPDSAP
Trigger: AGGTGCAGAATCTGGGACAAGTTGCATGAAGAGCATATCAATGCAGGACGTACAGTTCAGTTTAGGAACTACATTTGAGCCTTCTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525342.5
CDS-3UTR CAA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTGCTCTTCATGCAACTaGTCCCAGATTCTGCACCTT +
Preference number: 5 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHCSSCN*SQILHL
Trigger: AAGGTGCAGAATCTGGGACAAGTTGCATGAAGAGCA...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp CTCTTCAACATTCACAGCAGCACTGTTGACATGGTCTGCAATGCTGTCAATCTTACTGTACGTCCTGCATaGATATGCTCTTCATGCAAC +
Preference number: 5 (lower is better)
Translates to: LFNIHSSTVDMVCNAVNLTVRPA*ICSSCN
Trigger: GTTGCATGAAGAGCATATCAATGCAGGACGTACAGT...AAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTTGAAGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524405.5
ENST00000529340.5
CDS-3UTR CAA 90 bp GGAGGATTTATGCTCCTGAAGAATACTTGTGCTGTGGCTATCAAATGCACAGGTGCCTTCCCTAAGTTTTaGGTTCCCTCTTCAACATTC +
Preference number: 5 (lower is better)
Translates to: GGFMLLKNTCAVAIKCTGAFPKF*VPSSTF
Trigger: GAATGTTGAAGAGGGAACCAAAAACTTAGGGAAGGC...ACCTGTGCATTTGATAGCCACAGCACAAGTATTCTTCAGGAGCATAAATCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CAA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATGCATTTCTTGTCAGTTaGGCTGGGAAGATCTGGACA +
Preference number: 5 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHAFLVS*AGKIWT
Trigger: TGTCCAGATCTTCCCAGCCAAACTGACAAGAAATGC...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp TTATATACCCTCAGCCCAGGGCCTCAATCTCTTAACATCTCCATGAACACCCCACTCAGGATAGACATGTaGGCACCAATAATACTGAAA +
Preference number: 5 (lower is better)
Translates to: LYTLSPGPQSLNISMNTPLRIDM*APIILK
Trigger: TTTCAGTATTATTGGTGCCAACATGTCTATCCTGAG...TGGGGTGTTCATGGAGATGTTAAGAGATTGAGGCCCTGGGCTGAGGGTATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp CTAAGTTGGTGGGCTGAAAGGATAGCCAATTTGGGATGGAAGAGTGGGGTAATAGGCAGGTGGATGGGATaGAAATACTCTTTCTTGATT +
Preference number: 5 (lower is better)
Translates to: LSWWAERIANLGWKSGVIGRWMG*KYSFLI
Trigger: AATCAAGAAAGAGTATTTCAATCCCATCCACCTGCC...TATTACCCCACTCTTCCATCCCAAATTGGCTATCCTTTCAGCCCACCAACTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CAA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATGCCTTCCCTAAGTTTTaGGTTCCCTCTTCAACATTC +
Preference number: 5 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHAFPKF*VPSSTF
Trigger: GAATGTTGAAGAGGGAACCAAAAACTTAGGGAAGGC...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTGCATTTCTTGTCAGTTaGGCTGGGAAGATCTGGACA +
Preference number: 5 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSAFLVS*AGKIWT
Trigger: TGTCCAGATCTTCCCAGCCAAACTGACAAGAAATGC...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTGCTGACAGACCAAGCTaGGTGACTGGCTTAATAAGT +
Preference number: 5 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFADRPS*VTGLIS
Trigger: ACTTATTAAGCCAGTCACCAAGCTTGGTCTGTCAGC...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp TTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGGAGTTGCTCAGCCTCTCAATTTCTCGGATATaGGATCGGAGTTGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: FQTKFLNFSDIGSELLSLSISRI*DRSCSA
Trigger: GGCTGAGCAACTCCGATCCAATATCCGAGAAATTGA...GAGGCTGAGCAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525342.5
CDS-3UTR CAA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCTGCTCTTCATGCAACTaGTCCCAGATTCTGCACCTT +
Preference number: 5 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPCSSCN*SQILHL
Trigger: AAGGTGCAGAATCTGGGACAAGTTGCATGAAGAGCA...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTACTGTACGTCCTGCATaGATATGCTCTTCATGCAAC +
Preference number: 5 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFTVRPA*ICSSCN
Trigger: GTTGCATGAAGAGCATATCAATGCAGGACGTACAGT...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTGCCTTCCCTAAGTTTTaGGTTCCCTCTTCAACATTC +
Preference number: 5 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSAFPKF*VPSSTF
Trigger: GAATGTTGAAGAGGGAACCAAAAACTTAGGGAAGGC...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCGCATTTCTTGTCAGTTaGGCTGGGAAGATCTGGACA +
Preference number: 5 (lower is better)
Translates to: TLQSHLNISSHYLDILVFAFLVS*AGKIWT
Trigger: TGTCCAGATCTTCCCAGCCAAACTGACAAGAAATGC...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp TCTTCAACATTCACAGCAGCACTGTTGACATGGTCTGCAATGCTGTCAATCTTCCTCAGGATAGACATGTaGGCACCAATAATACTGAAA +
Preference number: 5 (lower is better)
Translates to: SSTFTAALLTWSAMLSIFLRIDM*APIILK
Trigger: TTTCAGTATTATTGGTGCCAACATGTCTATCCTGAG...GAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524405.5
CDS-3UTR CAA 90 bp TTTCCTTCACCAGAAGATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACACTTCAATCCCACTaGAACATCAGTAGCCACTAT +
Preference number: 5 (lower is better)
Translates to: FPSPEDIVGPNCNRVRQWTLQSH*NISSHY
Trigger: ATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT...CCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATCTTCTGGTGAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATGAGAAAATCTGCTCCTaGGCAGTCTTCAAACTTTAC +
Preference number: 5 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHEKICS*AVFKLY
Trigger: GTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTC...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTGCTGACAGACCAAGCTaGGTGACTGGCTTAATAAGT +
Preference number: 5 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSADRPS*VTGLIS
Trigger: ACTTATTAAGCCAGTCACCAAGCTTGGTCTGTCAGC...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp CCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACGCTGACAGACCAAGCTaGGTGACTGGCTTAATAAGT +
Preference number: 5 (lower is better)
Translates to: PTFLHISSPYQSYRFSFHADRPS*VTGLIS
Trigger: ACTTATTAAGCCAGTCACCAAGCTTGGTCTGTCAGC...GTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTGAAAGGATAGCCAATTaGGGATGGAAGAGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSERIAN*GWKSGV
Trigger: TACCCCACTCTTCCATCCCAAATTGGCTATCCTTTC...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CAA 90 bp CCCAGGCTTTTCCTCATCCTTCCTTGTAAGATTTCATATGGCAGCAACGAAGGAACATTTAAGGGAGAATaGACAGGACAAGTCTTGATA +
Preference number: 5 (lower is better)
Translates to: PRLFLILPCKISYGSNEGTFKGE*TGQVLI
Trigger: TATCAAGACTTGTCCTGTCAATTCTCCCTTAAATGT...TCCTTCGTTGCTGCCATATGAAATCTTACAAGGAAGGATGAGGAAAAGCCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CAA 90 bp ACACTTCAATCCCACTTGAACATCAGTAGCCACTATCTTGATATACTTGTGTTCACTGTACGTCCTGCATaGATATGCTCTTCATGCAAC +
Preference number: 5 (lower is better)
Translates to: TLQSHLNISSHYLDILVFTVRPA*ICSSCN
Trigger: GTTGCATGAAGAGCATATCAATGCAGGACGTACAGT...GAACACAAGTATATCAAGATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp GAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGAACTGTACGTCCTGCATaGATATGCTCTTCATGCAAC +
Preference number: 5 (lower is better)
Translates to: EVLGHPFGLSNKVSQFLGTVRPA*ICSSCN
Trigger: GTTGCATGAAGAGCATATCAATGCAGGACGTACAGT...TCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR CAA 90 bp CATAACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTCTGCCAGCTTGTATTTaGCAGCCTTCCCTAAGTTTT +
Preference number: 5 (lower is better)
Translates to: HNPTFLHISSPYQSYRFSLPACI*QPSLSF
Trigger: AAAACTTAGGGAAGGCTGCAAAATACAAGCTGGCAG...ACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCCTGCCAGCTTGTATTTaGCAGCCTTCCCTAAGTTTT +
Preference number: 5 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFLPACI*QPSLSF
Trigger: AAAACTTAGGGAAGGCTGCAAAATACAAGCTGGCAG...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCCTGCCAGCTTGTATTTaGCAGCCTTCCCTAAGTTTT +
Preference number: 5 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPLPACI*QPSLSF
Trigger: AAAACTTAGGGAAGGCTGCAAAATACAAGCTGGCAG...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp CCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACGAAGCCAGAAGATTTTaGGAAGAGAAGTTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: PTFLHISSPYQSYRFSFHEARRF*EEKLSL
Trigger: GAGGCTCAACTTCTCTTCCAAAAATCTTCTGGCTTC...GTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCGAAGCCAGAAGATTTTaGGAAGAGAAGTTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFEARRF*EEKLSL
Trigger: GAGGCTCAACTTCTCTTCCAAAAATCTTCTGGCTTC...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp GAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATTATATACCCAGGAATGGAGTCAAGTaGGTGACCACTAAGGTTGAA +
Preference number: 5 (lower is better)
Translates to: ENLLLGSLQTLPDIHYIPRNGVK*VTTKVE
Trigger: TTCAACCTTAGTGGTCACCAACTTGACTCCATTCCT...GGGTATATAATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CAA 90 bp TCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTTGCTCTTCATGCAACTaGTCCCAGATTCTGCACCTT +
Preference number: 5 (lower is better)
Translates to: SSEVLGHPFGLSNKVSQFCSSCN*SQILHL
Trigger: AAGGTGCAGAATCTGGGACAAGTTGCATGAAGAGCA...AAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR CAA 90 bp ATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACAAAGTTTCTCAACTGTACGTCCTGCATaGATATGCTCTTCATGCAAC +
Preference number: 5 (lower is better)
Translates to: ILFRSTRSSFRTFKQSFSTVRPA*ICSSCN
Trigger: GTTGCATGAAGAGCATATCAATGCAGGACGTACAGT...TGAGAAACTTTGTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525342.5
ENST00000529340.5
ENST00000531035.5
CDS-3UTR CAA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCCGATTCTGCAGCATTTaGATCTTGAGGAATTTCAGG +
Preference number: 5 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFRFCSI*ILRNFR
Trigger: CCTGAAATTCCTCAAGATCAAAATGCTGCAGAATCG...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp TCTACACTTAGCATTAAGGTCTCCAATTCAGGGTTATGGAAGAAACTAGTCTTCACACTTCAATCCCACTaGAACATCAGTAGCCACTAT +
Preference number: 5 (lower is better)
Translates to: STLSIKVSNSGLWKKLVFTLQSH*NISSHY
Trigger: ATAGTGGCTACTGATGTTCAAGTGGGATTGAAGTGT...GAAGACTAGTTTCTTCCATAACCCTGAATTGGAGACCTTAATGCTAAGTGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp CCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACGAGAAAATCTGCTCCTaGGCAGTCTTCAAACTTTAC +
Preference number: 5 (lower is better)
Translates to: PTFLHISSPYQSYRFSFHEKICS*AVFKLY
Trigger: GTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTC...GTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp TTCCAGGGAGAAAATCTGCTCCTTGGCAGTCTTCAAACTTTACCTGACATACATGAGAAGTTGAGCCTCTaGCATTTTCTTACATCATTA +
Preference number: 5 (lower is better)
Translates to: FQGENLLLGSLQTLPDIHEKLSL*HFLTSL
Trigger: TAATGATGTAAGAAAATGCAAGAGGCTCAACTTCTC...ATGTATGTCAGGTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTCCCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp AACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTGAAGCCAGAAGATTTTaGGAAGAGAAGTTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: NPTFLHISSPYQSYRFSFEARRF*EEKLSL
Trigger: GAGGCTCAACTTCTCTTCCAAAAATCTTCTGGCTTC...AAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp AACCCAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTGCTCCTGAAGAATACTaGTGCTGTGGCTATCAAATG +
Preference number: 5 (lower is better)
Translates to: NPTFLHISSPYQSYRFSFAPEEY*CCGYQM
Trigger: CATTTGATAGCCACAGCACAAGTATTCTTCAGGAGC...AAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CAA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACACGATTCTGCAGCATTTaGATCTTGAGGAATTTCAGG +
Preference number: 5 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTRFCSI*ILRNFR
Trigger: CCTGAAATTCCTCAAGATCAAAATGCTGCAGAATCG...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp GATATAGTTGGACCAAATTGCAATAGGGTTCGCCAATGGACTCCATTATGTAGTTCAGTAGCCACTATCTaGATATACTTGTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: DIVGPNCNRVRQWTPLCSSVATI*IYLCSK
Trigger: TTTGGAACACAAGTATATCAAGATAGTGGCTACTGA...ACTACATAATGGAGTCCATTGGCGAACCCTATTGCAATTTGGTCCAACTATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTTCAGTAGCCACTATCTaGATATACTTGTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFSVATI*IYLCSK
Trigger: TTTGGAACACAAGTATATCAAGATAGTGGCTACTGA...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACAGAGAAAATCTGCTCCTaGGCAGTCTTCAAACTTTAC +
Preference number: 5 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTEKICS*AVFKLY
Trigger: GTAAAGTTTGAAGACTGCCAAGGAGCAGATTTTCTC...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp ACAGCAGCAAAGGTCCTCAGGATAGACATGTTGGCACCAATAATACTGAAATTTGAGAAGTTGAGCCTCTaGCATTTTCTTACATCATTA +
Preference number: 5 (lower is better)
Translates to: TAAKVLRIDMLAPIILKFEKLSL*HFLTSL
Trigger: TAATGATGTAAGAAAATGCAAGAGGCTCAACTTCTC...AAATTTCAGTATTATTGGTGCCAACATGTCTATCCTGAGGACCTTTGCTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACAGGATTCGAACTTTATTaGGTATTCAGTGGGAACCAC +
Preference number: 5 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTGFELY*VFSGNH
Trigger: GTGGTTCCCACTGAATACCAAATAAAGTTCGAATCC...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS-3UTR CAA 90 bp CAGGATCTATCATTCTCTTCAGAAGTACTAGGTCATCCTTTCGGACTTTCAAACATTTTTGTTCCACAGTaGATGAAATCCTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: QDLSFSSEVLGHPFGLSNIFVPQ*MKSLEK
Trigger: CTTCTCCAAGGATTTCATCAACTGTGGAACAAAAAT...GTTTGAAAGTCCGAAAGGATGACCTAGTACTTCTGAAGAGAATGATAGATCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525342.5
CDS CCA 90 bp CTTAACCTTTCCAGGTCTGTTGGGATTACTATCTTAATGAATTTCTaGATAGCTGGTTCAAGACGGCGTAATTTCACTTTTTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: LNLSRSVGITILMNF*IAGSRRRNFTFSSS
Trigger: AGATGAAGAAAAAGTGAAATTACGCCGTCTTGAACCAGCTATCCAGAAATTCATTAAGATAGTAATCCCAACAGACCTGGAAAGGTTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525342.5
ENST00000525640.5
ENST00000526607.1
ENST00000529340.5
ENST00000531035.5
ENST00000533696.5
ENST00000534052.1
CDS-3UTR CAA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACACTCAGGATAGACATGTaGGCACCAATAATACTGAAA +
Preference number: 5 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTLRIDM*APIILK
Trigger: TTTCAGTATTATTGGTGCCAACATGTCTATCCTGAG...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259400.11
ENST00000525640.5
ENST00000534052.1
CDS-3UTR CAA 90 bp CAACGTTTCTACACATCTCAAGTCCTTATCAGAGTTATAGGTTCAGTTTTCACAATCTCCCATTTCTATTaGAGAGTAGCAATGTGGATA +
Preference number: 5 (lower is better)
Translates to: QRFYTSQVLIRVIGSVFTISHFY*RVAMWI
Trigger: TATCCACATTGCTACTCTCAAATAGAAATGGGAGAT...TGTGAAAACTGAACCTATAACTCTGATAAGGACTTGAGATGTGTAGAAACGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259400.11
CDS TCA 72 bp GCGCGCGCCACACGGGCGCCAGGCCCACCAAGCCTGTaGGGGCCCGACGCCCCCAAAGGCGGCCTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: ARATRAPGPPSL*GPDAPKGGLQR
Trigger: TCTCTGGAGGCCGCCTTTGGGGGCGTCGGGCCCTCACAGGCTTGGTGGGCCTGGCGCCCGTGTGGCGCGCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS CCA 72 bp CGCGGGTCTGTCCCGGGACCCAGACGCCAGCGACCCTaGCGACCCGGGGCCTACAGCGCGCCAGAGACAGGA +
Preference number: 6 (lower is better)
Translates to: RGSVPGPRRQRP*RPGAYSAPETG
Trigger: TCCTGTCTCTGGCGCGCTGTAGGCCCCGGGTCGCCAGGGTCGCTGGCGTCTGGGTCCCGGGACAGACCCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS CAA 90 bp CGCTCGCACTTCGGATCCAATGCCCTACTTGCCGCCCAGCGCCTCTaGCGCGCGCCACACGGGCGCCAGGCCCACCAAGCCTGTGAGGGC +
Preference number: 6 (lower is better)
Translates to: RSHFGSNALLAAQRL*RAPHGRQAHQACEG
Trigger: GCCCTCACAGGCTTGGTGGGCCTGGCGCCCGTGTGGCGCGCGCAAGAGGCGCTGGGCGGCAAGTAGGGCATTGGATCCGAAGTGCGAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS CAA 90 bp AGGAGGAGCCACCATGGCGCTCGCACTTCGGATCCAATGCCCTACTaGCCGCCCAGCGCCTCTTGCGCGCGCCACACGGGCGCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: RRSHHGARTSDPMPY*PPSASCARHTGARP
Trigger: GGGCCTGGCGCCCGTGTGGCGCGCGCAAGAGGCGCTGGGCGGCAAGTAGGGCATTGGATCCGAAGTGCGAGCGCCATGGTGGCTCCTCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS GCA 72 bp GGCCACACACACCAAACGCCCCCACCAGCGAACGGATaGGCGGGTCTGTCCCGGGACCCAGACGCCAGCGAC +
Preference number: 6 (lower is better)
Translates to: GHTHQTPPPANG*AGLSRDPDASD
Trigger: GTCGCTGGCGTCTGGGTCCCGGGACAGACCCGCGCATCCGTTCGCTGGTGGGGGCGTTTGGTGTGTGTGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS CAA 72 bp TTCGGATCCAATGCCCTACTTGCCGCCCAGCGCCTCTaGCGCGCGCCACACGGGCGCCAGGCCCACCAAGCC +
Preference number: 6 (lower is better)
Translates to: FGSNALLAAQRL*RAPHGRQAHQA
Trigger: GGCTTGGTGGGCCTGGCGCCCGTGTGGCGCGCGCAAGAGGCGCTGGGCGGCAAGTAGGGCATTGGATCCGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS GCA 72 bp ACCATGGCGCTCGCACTTCGGATCCAATGCCCTACTTaGCGCCCAGCGCCTCTTGCGCGCGCCACACGGGCG +
Preference number: 6 (lower is better)
Translates to: TMALALRIQCPT*RPAPLARATRA
Trigger: CGCCCGTGTGGCGCGCGCAAGAGGCGCTGGGCGGCAAGTAGGGCATTGGATCCGAAGTGCGAGCGCCATGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS GCA 72 bp GGAGGAGCCACCATGGCGCTCGCACTTCGGATCCAATaGCCTACTTGCCGCCCAGCGCCTCTTGCGCGCGCC +
Preference number: 6 (lower is better)
Translates to: GGATMALALRIQ*PTCRPAPLARA
Trigger: GGCGCGCGCAAGAGGCGCTGGGCGGCAAGTAGGGCATTGGATCCGAAGTGCGAGCGCCATGGTGGCTCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS CAA 72 bp CACCATGGCGCTCGCACTTCGGATCCAATGCCCTACTaGCCGCCCAGCGCCTCTTGCGCGCGCCACACGGGC +
Preference number: 6 (lower is better)
Translates to: HHGARTSDPMPY*PPSASCARHTG
Trigger: GCCCGTGTGGCGCGCGCAAGAGGCGCTGGGCGGCAAGTAGGGCATTGGATCCGAAGTGCGAGCGCCATGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS CCA 72 bp GGGAGCCAAGGTGTGGGACCTTCTGCCAACCACCTCTaGGTTTGGCGAGCAGGGGCTTCCGGCCTCTCGCTC +
Preference number: 6 (lower is better)
Translates to: GSQGVGPSANHL*VWRAGASGLSL
Trigger: GAGCGAGAGGCCGGAAGCCCCTGCTCGCCAAACCCAGAGGTGGTTGGCAGAAGGTCCCACACCTTGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS GCA 72 bp CCCGCGACCCCGGGAGGCCGTCCTGCTCGCATCGTCTaGGGCCTCCCTATACCAGCTTCCAATAAAGCTTCC +
Preference number: 6 (lower is better)
Translates to: PATPGGRPARIV*GLPIPASNKAS
Trigger: GGAAGCTTTATTGGAAGCTGGTATAGGGAGGCCGCAGACGATGCGAGCAGGACGGCCTCCCGGGGTCGCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS CCA 72 bp CAAGGTGTGGGACCTTCTGCCAACCACCTCTGGGTTTaGCGAGCAGGGGCTTCCGGCCTCTCGCTCCCAGTC +
Preference number: 6 (lower is better)
Translates to: QGVGPSANHLWV*RAGASGLSLPV
Trigger: GACTGGGAGCGAGAGGCCGGAAGCCCCTGCTCGCCAAACCCAGAGGTGGTTGGCAGAAGGTCCCACACCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS CAA 72 bp CCAAGGTGTGGGACCTTCTGCCAACCACCTCTGGGTTaGGCGAGCAGGGGCTTCCGGCCTCTCGCTCCCAGT +
Preference number: 6 (lower is better)
Translates to: PRCGTFCQPPLG*ASRGFRPLAPS
Trigger: ACTGGGAGCGAGAGGCCGGAAGCCCCTGCTCGCCAAACCCAGAGGTGGTTGGCAGAAGGTCCCACACCTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS CCA 72 bp GGCTCCGCCACTTCTGAAAAACAGGAGGAGCCACCATaGCGCTCGCACTTCGGATCCAATGCCCTACTTGCC +
Preference number: 6 (lower is better)
Translates to: GSATSEKQEEPP*RSHFGSNALLA
Trigger: GGCAAGTAGGGCATTGGATCCGAAGTGCGAGCGCCATGGTGGCTCCTCCTGTTTTTCAGAAGTGGCGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS GCA 72 bp TTAGCTAAAAGGAGGGAGCCAAGGTGTGGGACCTTCTaGCAACCACCTCTGGGTTTGGCGAGCAGGGGCTTC +
Preference number: 6 (lower is better)
Translates to: LAKRREPRCGTF*QPPLGLASRGF
Trigger: GAAGCCCCTGCTCGCCAAACCCAGAGGTGGTTGGCAGAAGGTCCCACACCTTGGCTCCCTCCTTTTAGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525640.5
ENST00000534052.1
CDS TCA 72 bp TTCCAAAAACGAAACCAAGCGAGGCTCCGCCACTTCTaGAAAACAGGAGGAGCCACCATGGCGCTCGCACTT +
Preference number: 6 (lower is better)
Translates to: FQKRNQARLRHF*KTGGATMALAL
Trigger: AAGTGCGAGCGCCATGGTGGCTCCTCCTGTTTTTCAGAAGTGGCGGAGCCTCGCTTGGTTTCGTTTTTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525640.5
ENST00000526607.1
ENST00000534052.1
CDS GCA 72 bp GAGACTAGATGCAAAGGAATTATGAGTGAGCGGTCCTaGTGGGGAGCAGCAGGGAGCCAACACACACTATTT +
Preference number: 6 (lower is better)
Translates to: ETRCKGIMSERS*WGAAGSQHTLF
Trigger: AAATAGTGTGTGTTGGCTCCCTGCTGCTCCCCAGCAGGACCGCTCACTCATAATTCCTTTGCATCTAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529385.1
CDS GCA 72 bp CGGATATTGGATCGGAGTTGTCAACACTGGAGACACTaGCTGTTGCCACCAGCCAAAATGGGAAAACTCTTA +
Preference number: 6 (lower is better)
Translates to: RILDRSCQHWRH*LLPPAKMGKLL
Trigger: TAAGAGTTTTCCCATTTTGGCTGGTGGCAACAGGCAGTGTCTCCAGTGTTGACAACTCCGATCCAATATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525847.1
CDS CAA 90 bp TCTCGGATATTGGATCGGAGTTGTCAACACTGGAGACACTGCCTGTaGCCACCAGCCAAAATGGGAAAACTCTTAATTCACAGGGCATTG +
Preference number: 6 (lower is better)
Translates to: SRILDRSCQHWRHCL*PPAKMGKLLIHRAL
Trigger: CAATGCCCTGTGAATTAAGAGTTTTCCCATTTTGGCTGGTGGCAACAGGCAGTGTCTCCAGTGTTGACAACTCCGATCCAATATCCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525847.1
CDS CAA 72 bp TTGGATCGGAGTTGTCAACACTGGAGACACTGCCTGTaGCCACCAGCCAAAATGGGAAAACTCTTAATTCAC +
Preference number: 6 (lower is better)
Translates to: LDRSCQHWRHCL*PPAKMGKLLIH
Trigger: GTGAATTAAGAGTTTTCCCATTTTGGCTGGTGGCAACAGGCAGTGTCTCCAGTGTTGACAACTCCGATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525847.1
CDS CAA 72 bp ACAAAGTTTCTCAATTTCTCGGATATTGGATCGGAGTaGTCAACACTGGAGACACTGCCTGTTGCCACCAGC +
Preference number: 6 (lower is better)
Translates to: TKFLNFSDIGSE*STLETLPVATS
Trigger: GCTGGTGGCAACAGGCAGTGTCTCCAGTGTTGACAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525847.1
CDS CAA 90 bp GACTTTCAAACAAAGTTTCTCAATTTCTCGGATATTGGATCGGAGTaGTCAACACTGGAGACACTGCCTGTTGCCACCAGCCAAAATGGG +
Preference number: 6 (lower is better)
Translates to: DFQTKFLNFSDIGSE*STLETLPVATSQNG
Trigger: CCCATTTTGGCTGGTGGCAACAGGCAGTGTCTCCAGTGTTGACAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525847.1
CDS GCA 72 bp CTCTTCAACATTCACAGCAGCACTGTTGACATGGTCTaGAATGCTGTCAATCTTCTCCTGCTGAGACTAGAT +
Preference number: 6 (lower is better)
Translates to: LFNIHSSTVDMV*NAVNLLLLRLD
Trigger: ATCTAGTCTCAGCAGGAGAAGATTGACAGCATTGCAGACCATGTCAACAGTGCTGCTGTGAATGTTGAAGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529385.1
CDS CAA 90 bp TCATCCTTTCGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATATaGGATCGGAGTTGTCAACACTGGAGACACTGCCTGTTGCCACCA +
Preference number: 6 (lower is better)
Translates to: SSFRTFKQSFSISRI*DRSCQHWRHCLLPP
Trigger: TGGTGGCAACAGGCAGTGTCTCCAGTGTTGACAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCGAAAGGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525847.1
CDS CAA 72 bp CGGACTTTCAAACAAAGTTTCTCAATTTCTCGGATATaGGATCGGAGTTGTCAACACTGGAGACACTGCCTG +
Preference number: 6 (lower is better)
Translates to: RTFKQSFSISRI*DRSCQHWRHCL
Trigger: CAGGCAGTGTCTCCAGTGTTGACAACTCCGATCCAATATCCGAGAAATTGAGAAACTTTGTTTGAAAGTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525847.1
CDS CCA 72 bp ATTTCTTCCGGCCCGCCGCTTAATGTTTCTGACTTATaGAAGAGATACCGAATTTGGAGAGAAAAGTCAAAG +
Preference number: 6 (lower is better)
Translates to: ISSGPPLNVSDL*KRYRIWREKSK
Trigger: CTTTGACTTTTCTCTCCAAATTCGGTATCTCTTCCATAAGTCAGAAACATTAAGCGGCGGGCCGGAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525640.5
CDS CCA 72 bp TATATACCAATCAGCTTCCACCAACAGTCATGGATCTaGTCAAAGGAGGCTGTAGCAAAGTTTCTTCATCAT +
Preference number: 6 (lower is better)
Translates to: YIPISFHQQSWI*SKEAVAKFLHH
Trigger: ATGATGAAGAAACTTTGCTACAGCCTCCTTTGACCAGATCCATGACTGTTGGTGGAAGCTGATTGGTATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525579.5
CDS CCA 72 bp TCCAGGTCTGTTGGGATTACTATCTTAATGAATTTCTaGATAGCTGGTTCAAGACGGCGTAATTTCACTTTT +
Preference number: 6 (lower is better)
Translates to: SRSVGITILMNF*IAGSRRRNFTF
Trigger: AAAAGTGAAATTACGCCGTCTTGAACCAGCTATCCAGAAATTCATTAAGATAGTAATCCCAACAGACCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000259400.11
ENST00000524405.5
ENST00000525342.5
ENST00000525640.5
ENST00000526607.1
ENST00000529340.5
ENST00000531035.5
ENST00000533696.5
ENST00000534052.1