RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STX16 (Homo sapiens)

Ensembl gene IDs: ENSG00000124222

Ensembl transcript IDs: ENST00000312283.12, ENST00000355957.9, ENST00000358029.8, ENST00000359617.8, ENST00000361830.7, ENST00000371132.8, ENST00000371141.8, ENST00000412911.5, ENST00000438253.1, ENST00000458280.5, ENST00000460655.5, ENST00000464640.5, ENST00000467096.5, ENST00000468590.1, ENST00000476384.5, ENST00000483434.5, ENST00000493301.5, ENST00000496003.5, ENST00000496117.5

Found 962 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATaGAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGC +
Preference number: 1 (lower is better)
Translates to: SPDRLSRTREGGVRG*KGSLPRRPQIPRGC
Trigger: GCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
3UTR TCA 90 bp CCTCCTCTCAGAGGGCGCATCCCAGGCAGAGGAGACTGGCCTGGGTaGTCGTTACCTCCACGGCCCAGTAGAGTGTGGAAAAACATGAGG +
Preference number: 1 (lower is better)
Translates to: PPLRGRIPGRGDWPG*SLPPRPSRVWKNMR
Trigger: CCTCATGTTTTTCCACACTCTACTGGGCCGTGGAGGTAACGATCACCCAGGCCAGTCTCCTCTGCCTGGGATGCGCCCTCTGAGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR GCA 90 bp CTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATaGCACTTATCGAGACTTCACGCCAACGAGGACAACAATGAGCAC +
Preference number: 1 (lower is better)
Translates to: LTPGRSTRAAHTKTQ*HLSRLHANEDNNEH
Trigger: GTGCTCATTGTTGTCCTCGTTGGCGTGAAGTCTCGATAAGTGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483434.5
3UTR TCA 90 bp CCTGCAGTGACTCTCAACAGCTACGGAAGTCTCACATTGCAGGGCTaGCTGATGAGGTGCTGGCTTCTTATTCTCCGGCCCTCTTTCCTA +
Preference number: 1 (lower is better)
Translates to: PAVTLNSYGSLTLQG*LMRCWLLILRPSFL
Trigger: TAGGAAAGAGGGCCGGAGAATAAGAAGCCAGCACCTCATCAGTCAGCCCTGCAATGTGAGACTTCCGTAGCTGTTGAGAGTCACTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR TCA 90 bp CTGGGTGATCGTTACCTCCACGGCCCAGTAGAGTGTGGAAAAACATaGGGTGCCCACAGACAATGGCTGCCAGCGAGTAAAGGGAAAGAA +
Preference number: 1 (lower is better)
Translates to: LGDRYLHGPVECGKT*GAHRQWLPASKGKE
Trigger: TTCTTTCCCTTTACTCGCTGGCAGCCATTGTCTGTGGGCACCTCATGTTTTTCCACACTCTACTGGGCCGTGGAGGTAACGATCACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CCA 90 bp CATTCCACAGCCACATCAGTAATAGGAAAACCACCAATGGCTACCTaGAGGTGGCACCAACTTGGAAAGGGAAGGCTGGGCAGGGGTTTG +
Preference number: 1 (lower is better)
Translates to: HSTATSVIGKPPMAT*RWHQLGKGRLGRGL
Trigger: CAAACCCCTGCCCAGCCTTCCCTTTCCAAGTTGGTGCCACCTCCAGGTAGCCATTGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR TCA 90 bp ACGCGTGGTAAACATGTCTGTTTCTCCTTCTACCTCCACTCAACCTaGGCTGCACCCGGACACTTTAAAGGAGGCATGTGTCCAGAGGCT +
Preference number: 1 (lower is better)
Translates to: TRGKHVCFSFYLHST*AAPGHFKGGMCPEA
Trigger: AGCCTCTGGACACATGCCTCCTTTAAAGTGTCCGGGTGCAGCTCAGGTTGAGTGGAGGTAGAAGGAGAAACAGACATGTTTACCACGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR GCA 90 bp TCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTaGTCAGTGGCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGA +
Preference number: 1 (lower is better)
Translates to: SRCPQSLAMCLLPGH*SVAMEEPINQIAGG
Trigger: TCCACCAGCGATTTGATTTATTGGCTCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR TCA 90 bp CTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTaGAATGCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACA +
Preference number: 1 (lower is better)
Translates to: LFPKQCLSGNTRSAS*NARAPLGPYHSTAT
Trigger: TGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGCATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CCA 90 bp CCGGTATTGCCACTGTGGACTGTTTTTGAGGCAAGTTCCCTAATGTaGACAGCCCCACACCTAAGAGCAGCAGATCTAACTTGGAACGTC +
Preference number: 1 (lower is better)
Translates to: PVLPLWTVFEASSLM*TAPHLRAADLTWNV
Trigger: GACGTTCCAAGTTAGATCTGCTGCTCTTAGGTGTGGGGCTGTCCACATTAGGGAACTTGCCTCAAAAACAGTCCACAGTGGCAATACCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CCA 90 bp AAGTCCCTGAATATTTCATTCAGGTCAGAAATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGC +
Preference number: 1 (lower is better)
Translates to: KSLNISFRSEMDCTI*RISRSRSSTISVFC
Trigger: GCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAATATTCAGGGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
3UTR TCA 90 bp AACTTGGAAAGGGAAGGCTGGGCAGGGGTTTGGACACTAAGCCCATaGGCTGTTTGGACAACTTCAATCTCTGGAATTGAGTTTAAATTT +
Preference number: 1 (lower is better)
Translates to: NLEREGWAGVWTLSP*AVWTTSISGIEFKF
Trigger: AAATTTAAACTCAATTCCAGAGATTGAAGTTGTCCAAACAGCTCATGGGCTTAGTGTCCAAACCCCTGCCCAGCCTTCCCTTTCCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR TCA 90 bp TGTCAAGGACTGTACCCTGTTCTACAATCATCGCCCCTAAGTCCCTaGATATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAA +
Preference number: 1 (lower is better)
Translates to: CQGLYPVLQSSPLSP*IFHSGQKWTVQSGE
Trigger: TTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAATATTCAGGGACTTAGGGGCGATGATTGTAGAACAGGGTACAGTCCTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
3UTR CCA 90 bp GAGACAGCAGTTTTCAGTTACAATCTTGGGAAAGATCAGGAGCTTTaGAAAACGCGTGGTAAACATGTCTGTTTCTCCTTCTACCTCCAC +
Preference number: 1 (lower is better)
Translates to: ETAVFSYNLGKDQEL*KTRGKHVCFSFYLH
Trigger: GTGGAGGTAGAAGGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAGATTGTAACTGAAAACTGCTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR TCA 90 bp GATACTGTTCTGCCTTGTGAAGCTGTTTCAAACCATCTTCAGTTTTaGTACAGGACTGTTCAACGTTATAGTCAATTCTGTCAAGGACTG +
Preference number: 1 (lower is better)
Translates to: DTVLPCEAVSNHLQF*YRTVQRYSQFCQGL
Trigger: CAGTCCTTGACAGAATTGACTATAACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTTGAAACAGCTTCACAAGGCAGAACAGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
3UTR-3UTR GCA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCTCGAGGCTGCACCTCTaGGGGCAGCTGGCGGGGCGC +
Preference number: 2 (lower is better)
Translates to: GKEESVDAKVRCPDALRFSRLHL*GQLAGR
Trigger: GCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGA...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
3UTR-3UTR GCA 90 bp ACAAACGAGGAGCTTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTCGAGGCTGCACCTCTaGGGGCAGCTGGCGGGGCGC +
Preference number: 2 (lower is better)
Translates to: TNEELPSQDAPSPWQCACSRLHL*GQLAGR
Trigger: GCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGA...GCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAAGCTCCTCGTTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR GCA 90 bp TTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGGGAGGAGTCCGTGGATaGAAAGGTTCGCTGCCCCGA +
Preference number: 2 (lower is better)
Translates to: FLVKMPPVLGNVPASWALGGVRG*KGSLPR
Trigger: TCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC...CAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp ACAAACGAGGAGCTTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTGAGCAAGGATGGCTaGGGATACCCATGGGGACAC +
Preference number: 2 (lower is better)
Translates to: TNEELPSQDAPSPWQCACLSKDG*GYPWGH
Trigger: GTGTCCCCATGGGTATCCCCAGCCATCCTTGCTCAA...GCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAAGCTCCTCGTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CAA 90 bp ACCTGGAGGTGGCACCAACTTGGAAAGGGAAGGCTGGGCAGGGGTTaGGACACTAAGCCCATGAGCTGTTTGGACAACTTCAATCTCTGG +
Preference number: 2 (lower is better)
Translates to: TWRWHQLGKGRLGRG*DTKPMSCLDNFNLW
Trigger: CCAGAGATTGAAGTTGTCCAAACAGCTCATGGGCTTAGTGTCCAAACCCCTGCCCAGCCTTCCCTTTCCAAGTTGGTGCCACCTCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR TCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAAATTCCCCGGACCGCTTaGGCAGGACTAGGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKIPRTA*AGLGKE
Trigger: CTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAAT...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR GCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCACAGATTCCTCGAGGCTaGACCTCTGCGGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: APLGPYHSTATSVIGKPPQIPRG*TSAGSW
Trigger: CCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTG...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CAA 90 bp GTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATaGCTCAGTGGCAATGGAAGAGCCAATAAATCAAATCGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: VKMPPVLGNVPASWA*LSGNGRANKSNRWW
Trigger: CCACCAGCGATTTGATTTATTGGCTCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR TCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACCTGGTCTCGAACTCCTaGCCTCGTGACCGCCTTGGC +
Preference number: 2 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHLVSNS*PRDRLG
Trigger: GCCAAGGCGGTCACGAGGTCAGGAGTTCGAGACCAG...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR GCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACATCGAGGCTGCACCTCTaGGGGCAGCTGGCGGGGCGC +
Preference number: 2 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTSRLHL*GQLAGR
Trigger: GCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGA...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCCATGGGGACACACTaGCTGAGTCTGGTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKPMGTH*LSLVAF
Trigger: GAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGG...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR TCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACATTCCCCGGACCGCTTaGGCAGGACTAGGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHIPRTA*AGLGKE
Trigger: CTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAAT...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAATGGATTGAGCAAGGATaGCTGGGGATACCCATGGGG +
Preference number: 2 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKWIEQG*LGIPMG
Trigger: CCCCATGGGTATCCCCAGCCATCCTTGCTCAATCCA...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR TCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACCCTACTTTGGCGGTCTaGCCCACGCTCACACAAACG +
Preference number: 2 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHPTLAV*PTLTQT
Trigger: CGTTTGTGTGAGCGTGGGTCAGACCGCCAAAGTAGG...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR GCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACGATGCAAAGGTTCGCTaGCCCGACGCCCTCAGATTC +
Preference number: 2 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHDAKVR*PDALRF
Trigger: GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR GCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACTGCTTCCTGGGCATTaGTCAGTGGCAATGGAAGAG +
Preference number: 2 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKLLPGH*SVAMEE
Trigger: CTCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAG...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACGGAAGGAGGAGTCCGTaGATGCAAAGGTTCGCTGCC +
Preference number: 2 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHGRRSP*MQRFAA
Trigger: GGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCC...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCATGGATTGAGCAAGGATaGCTGGGGATACCCATGGGG +
Preference number: 2 (lower is better)
Translates to: APLGPYHSTATSVIGKPPWIEQG*LGIPMG
Trigger: CCCCATGGGTATCCCCAGCCATCCTTGCTCAATCCA...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACGAGGTGGCACCAACTTaGAAAGGGAAGGCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHEVAPT*KGKAGQ
Trigger: CTGCCCAGCCTTCCCTTTCCAAGTTGGTGCCACCTC...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp CAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGC +
Preference number: 2 (lower is better)
Translates to: QVRNGLYNLANLSFPLFHMDCTI*RISRSR
Trigger: GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCAT...GTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
3UTR-3UTR GCA 90 bp TTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGATACTGAACAGCTTCTaGAGTGCCTGTAAACTCTCA +
Preference number: 2 (lower is better)
Translates to: FLVKMPPVLGNVPASWALILNSF*SACKLS
Trigger: TGAGAGTTTACAGGCACTGCAGAAGCTGTTCAGTAT...CAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCTGGATTGAGCAAGGATaGCTGGGGATACCCATGGGG +
Preference number: 2 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSWIEQG*LGIPMG
Trigger: CCCCATGGGTATCCCCAGCCATCCTTGCTCAATCCA...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp GGCACACACGAAAACCCAATGCCACTTATCGAGACTTCACGCCAACGAGGACAATCCACCAGAACTAACTaGTCCTCTGTAAAACCCCGA +
Preference number: 2 (lower is better)
Translates to: GTHENPMPLIETSRQRGQSTRTN*SSVKPR
Trigger: TCGGGGTTTTACAGAGGACCAGTTAGTTCTGGTGGA...TTGTCCTCGTTGGCGTGAAGTCTCGATAAGTGGCATTGGGTTTTCGTGTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467096.5
ENST00000483434.5
3UTR-3UTR GCA 90 bp TTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGACTCAATCTCTATTGTaGAGCAGTATCAAAGGTCCT +
Preference number: 2 (lower is better)
Translates to: FLVKMPPVLGNVPASWALTQSLL*SSIKGP
Trigger: AGGACCTTTGATACTGCTGCACAATAGAGATTGAGT...CAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp ACACTGGCTGAGTCTGGTGGCTTTCATAACACTGTCAAGCTTTCTTTTAATGTGGGAAGGAGGAGTCCGTaGATGCAAAGGTTCGCTGCC +
Preference number: 2 (lower is better)
Translates to: TLAESGGFHNTVKLSFNVGRRSP*MQRFAA
Trigger: GGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCC...CACATTAAAAGAAAGCTTGACAGTGTTATGAAAGCCACCAGACTCAGCCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp GTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCTCAGTGTGACCCATTTAAAATaGCCTCTGTGTAAATTCACA +
Preference number: 2 (lower is better)
Translates to: VKMPPVLGNVPASWALLSVTHLK*PLCKFT
Trigger: TGTGAATTTACACAGAGGCCATTTTAAATGGGTCAC...ACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCGATGAAGTCCTACTTTaGCGGTCTGACCCACGCTCA +
Preference number: 2 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSDEVLL*RSDPRS
Trigger: TGAGCGTGGGTCAGACCGCCAAAGTAGGACTTCATC...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR TCA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACCACACTTTGTTACTCTaGTCATTAACAGTGATGGAA +
Preference number: 2 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNHTLLL*SLTVME
Trigger: TTCCATCACTGTTAATGATCAGAGTAACAAAGTGTG...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR GCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTCAGATTCCTCGAGGCTaGACCTCTGCGGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLQIPRG*TSAGSW
Trigger: CCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTG...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp ACAAACGAGGAGCTTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTCCACTAATCCTAAATaGGGTGACCCATTTAAAATG +
Preference number: 2 (lower is better)
Translates to: TNEELPSQDAPSPWQCACSTNPK*GDPFKM
Trigger: CATTTTAAATGGGTCACCCCATTTAGGATTAGTGGA...GCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAAGCTCCTCGTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACAATGTGCCTGCTTCCTaGGCATTGCTCAGTGGCAAT +
Preference number: 2 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHNVPAS*ALLSGN
Trigger: ATTGCCACTGAGCAATGCCCAGGAAGCAGGCACATT...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACGCAAGTTCCCTAATGTaGACAGCCCCACACCTAAGA +
Preference number: 2 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHASSLM*TAPHLR
Trigger: TCTTAGGTGTGGGGCTGTCCACATTAGGGAACTTGC...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR TCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTATTCCCCGGACCGCTTaGGCAGGACTAGGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLIPRTA*AGLGKE
Trigger: CTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAAT...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR GCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACAGATGCAAAGGTTCGCTaGCCCGACGCCCTCAGATTC +
Preference number: 2 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTDAKVR*PDALRF
Trigger: GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR GCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAAATACTGAACAGCTTCTaGAGTGCCTGTAAACTCTCA +
Preference number: 2 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKILNSF*SACKLS
Trigger: TGAGAGTTTACAGGCACTGCAGAAGCTGTTCAGTAT...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCGCAGCAGATCTAACTTaGAACGTCTCAACCATGGGT +
Preference number: 2 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSAADLT*NVSTMG
Trigger: ACCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGC...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp TCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCCATTCAGGTCAGAAATaGACTGTACAATCTGGCGAA +
Preference number: 2 (lower is better)
Translates to: SEMDCTIWRISRSRSSTIHSGQK*TVQSGE
Trigger: TTCGCCAGATTGTACAGTCCATTTCTGACCTGAATG...GATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
3UTR CAA 90 bp TTCCCTAATGTGGACAGCCCCACACCTAAGAGCAGCAGATCTAACTaGGAACGTCTCAACCATGGGTTAAAATCAGATGGGATGAAAGAA +
Preference number: 2 (lower is better)
Translates to: FPNVDSPTPKSSRSN*ERLNHGLKSDGMKE
Trigger: TTCTTTCATCCCATCTGATTTTAACCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGCTCTTAGGTGTGGGGCTGTCCACATTAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR TCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAAGAGAGACATTTTGTGTaGCTGGTCCAAATAAAACAG +
Preference number: 2 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKERHFV*LVQIKQ
Trigger: CTGTTTTATTTGGACCAGTCACACAAAATGTCTCTC...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR TCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTGAACTCCTGACCTCGTaGCCGCCTTGGCCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLELLTS*PPWPLK
Trigger: TTTGAGAGGCCAAGGCGGTCACGAGGTCAGGAGTTC...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR TCA 90 bp TCAAGGACTGTACCCTGTTCTACAATCATCGCCCCTAAGTCCCTGAATATTTCATCGCCCCTAAGTCCCTaGATATTTCATTCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: SRTVPCSTIIAPKSLNISSPLSP*IFHSGQ
Trigger: CTGACCTGAATGAAATATTCAGGGACTTAGGGGCGA...TGAAATATTCAGGGACTTAGGGGCGATGATTGTAGAACAGGGTACAGTCCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
3UTR-3UTR GCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCAATACTGAACAGCTTCTaGAGTGCCTGTAAACTCTCA +
Preference number: 2 (lower is better)
Translates to: APLGPYHSTATSVIGKPPILNSF*SACKLS
Trigger: TGAGAGTTTACAGGCACTGCAGAAGCTGTTCAGTAT...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTCCCATGGGGACACACTaGCTGAGTCTGGTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLPMGTH*LSLVAF
Trigger: GAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGG...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTGAGGTGGCACCAACTTaGAAAGGGAAGGCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLEVAPT*KGKAGQ
Trigger: CTGCCCAGCCTTCCCTTTCCAAGTTGGTGCCACCTC...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp CCTGAATATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGC +
Preference number: 2 (lower is better)
Translates to: PEYFIQVRNGLYNLANLSMDCTI*RISRSR
Trigger: GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCAT...CGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAATATTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
3UTR-3UTR CCA 90 bp TCAAGGACTGTACCCTGTTCTACAATCATCGCCCCTAAGTCCCTGAATATTTCATCCACCAGAACTAACTaGTCCTCTGTAAAACCCCGA +
Preference number: 2 (lower is better)
Translates to: SRTVPCSTIIAPKSLNISSTRTN*SSVKPR
Trigger: TCGGGGTTTTACAGAGGACCAGTTAGTTCTGGTGGA...TGAAATATTCAGGGACTTAGGGGCGATGATTGTAGAACAGGGTACAGTCCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
3UTR-3UTR TCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACACACTTTGTTACTCTaGTCATTAACAGTGATGGAA +
Preference number: 2 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKHTLLL*SLTVME
Trigger: TTCCATCACTGTTAATGATCAGAGTAACAAAGTGTG...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR GCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCATACTGAACAGCTTCTaGAGTGCCTGTAAACTCTCA +
Preference number: 2 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSILNSF*SACKLS
Trigger: TGAGAGTTTACAGGCACTGCAGAAGCTGTTCAGTAT...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CAA 90 bp TTTGTAAGGCTCAGCACTTTAAAAAGCTTGAACAGAAGTCCGGTATaGCCACTGTGGACTGTTTTTGAGGCAAGTTCCCTAATGTGGACA +
Preference number: 2 (lower is better)
Translates to: FVRLSTLKSLNRSPV*PLWTVFEASSLMWT
Trigger: TGTCCACATTAGGGAACTTGCCTCAAAAACAGTCCACAGTGGCAATACCGGACTTCTGTTCAAGCTTTTTAAAGTGCTGAGCCTTACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR GCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCACTCAATCTCTATTGTaGAGCAGTATCAAAGGTCCT +
Preference number: 2 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSTQSLL*SSIKGP
Trigger: AGGACCTTTGATACTGCTGCACAATAGAGATTGAGT...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp TCAAGGACTGTACCCTGTTCTACAATCATCGCCCCTAAGTCCCTGAATATTTCACATTCAGGTCAGAAATaGACTGTACAATCTGGCGAA +
Preference number: 2 (lower is better)
Translates to: SRTVPCSTIIAPKSLNISHSGQK*TVQSGE
Trigger: TTCGCCAGATTGTACAGTCCATTTCTGACCTGAATG...TGAAATATTCAGGGACTTAGGGGCGATGATTGTAGAACAGGGTACAGTCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
3UTR-3UTR TCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTGAGTGTGGAAAAACATaGGGTGCCCACAGACAATGG +
Preference number: 2 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLECGKT*GAHRQW
Trigger: CCATTGTCTGTGGGCACCTCATGTTTTTCCACACTC...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACTCCACTAATCCTAAATaGGGTGACCCATTTAAAATG +
Preference number: 2 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHSTNPK*GDPFKM
Trigger: CATTTTAAATGGGTCACCCCATTTAGGATTAGTGGA...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp CAAACCATCTTCAGTTTTGATACAGGACTGTTCAACGTTATAGTCAATTCTGTCATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGC +
Preference number: 2 (lower is better)
Translates to: QTIFSFDTGLFNVIVNSVMDCTI*RISRSR
Trigger: GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCAT...GACAGAATTGACTATAACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
3UTR-3UTR GCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCATGAAGGGGCATTTTTaGCTCTACTCATCAATTTTT +
Preference number: 2 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSMKGHF*LYSSIF
Trigger: AAAAATTGATGAGTAGAGGCAAAAATGCCCCTTCAT...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR GCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTTTCAAGCTATTCTCCTaGCTCAGCCTCTTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLFKLFS*LSLLSS
Trigger: GCTACTCAAGAGGCTGAGGCAGGAGAATAGCTTGAA...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR TCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTACTGTGGACTGTTTTTaGGGCAAGTTCCCTAATGTG +
Preference number: 2 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLTVDCF*GKFPNV
Trigger: CACATTAGGGAACTTGCCTCAAAAACAGTCCACAGT...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR GCA 90 bp ACACTGGCTGAGTCTGGTGGCTTTCATAACACTGTCAAGCTTTCTTTTAATGTGATGAAGGGGCATTTTTaGCTCTACTCATCAATTTTT +
Preference number: 2 (lower is better)
Translates to: TLAESGGFHNTVKLSFNVMKGHF*LYSSIF
Trigger: AAAAATTGATGAGTAGAGGCAAAAATGCCCCTTCAT...CACATTAAAAGAAAGCTTGACAGTGTTATGAAAGCCACCAGACTCAGCCAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR TCA 90 bp TTAAAATCACAAGCATCTTCCGATTCTTCTTTTGATACTGTTCTGCCTTGTGAAAACCATCTTCAGTTTTaGTACAGGACTGTTCAACGT +
Preference number: 2 (lower is better)
Translates to: LKSQASSDSSFDTVLPCENHLQF*YRTVQR
Trigger: ACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTT...TTCACAAGGCAGAACAGTATCAAAAGAAGAATCGGAAGATGCTTGTGATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
3UTR-3UTR GCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTATGAAGGGGCATTTTTaGCTCTACTCATCAATTTTT +
Preference number: 2 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLMKGHF*LYSSIF
Trigger: AAAAATTGATGAGTAGAGGCAAAAATGCCCCTTCAT...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CCA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGGTGACCCATTTAAAATaGCCTCTGTGTAAATTCACA +
Preference number: 2 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMVTHLK*PLCKFT
Trigger: TGTGAATTTACACAGAGGCCATTTTAAATGGGTCAC...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CCA 72 bp CCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTaGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAG +
Preference number: 3 (lower is better)
Translates to: PQIPRGCTSAGS*RGAGQAPHTRE
Trigger: CTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
3UTR GCA 72 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTaGCCCGACGCCCTCAGATTCCTCGAGGCTGCACCT +
Preference number: 3 (lower is better)
Translates to: LGKEESVDAKVR*PDALRFLEAAP
Trigger: AGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
3UTR GCA 72 bp CGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATaGAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCT +
Preference number: 3 (lower is better)
Translates to: RLSRTREGGVRG*KGSLPRRPQIP
Trigger: AGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
3UTR GCA 72 bp GGGAGATCCACACGCGCGGCACACACGAAAACCCAATaGCACTTATCGAGACTTCACGCCAACGAGGACAAC +
Preference number: 3 (lower is better)
Translates to: GRSTRAAHTKTQ*HLSRLHANEDN
Trigger: GTTGTCCTCGTTGGCGTGAAGTCTCGATAAGTGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483434.5
3UTR CCA 72 bp AACGAGGAGCTTCCTAGTCAAGATGCCCCCAGTCCTTaGCAATGTGCCTGCTTCCTGGGCATTGCTCAGTGG +
Preference number: 3 (lower is better)
Translates to: NEELPSQDAPSP*QCACFLGIAQW
Trigger: CCACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAAGCTCCTCGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR TCA 72 bp ACTCTCAACAGCTACGGAAGTCTCACATTGCAGGGCTaGCTGATGAGGTGCTGGCTTCTTATTCTCCGGCCC +
Preference number: 3 (lower is better)
Translates to: TLNSYGSLTLQG*LMRCWLLILRP
Trigger: GGGCCGGAGAATAAGAAGCCAGCACCTCATCAGTCAGCCCTGCAATGTGAGACTTCCGTAGCTGTTGAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CCA 72 bp GCCACATCAGTAATAGGAAAACCACCAATGGCTACCTaGAGGTGGCACCAACTTGGAAAGGGAAGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: ATSVIGKPPMAT*RWHQLGKGRLG
Trigger: GCCCAGCCTTCCCTTTCCAAGTTGGTGCCACCTCCAGGTAGCCATTGGTGGTTTTCCTATTACTGATGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR GCA 72 bp ATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATaGCAGGGCCCCTCTAGGACCTTATCATTCCACAGC +
Preference number: 3 (lower is better)
Translates to: MFVREYQVRFLK*QGPSRTLSFHS
Trigger: GCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGCATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CAA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGAGATGCCCCCAGTCCTaGGCAATGTGCCTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMRCPQS*AMCLLP
Trigger: AGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCT...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CAA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACAGATGCCCCCAGTCCTaGGCAATGTGCCTGCTTCCT +
Preference number: 3 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHRCPQS*AMCLLP
Trigger: AGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCT...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR TCA 72 bp AGGGAAGGCTGGGCAGGGGTTTGGACACTAAGCCCATaGGCTGTTTGGACAACTTCAATCTCTGGAATTGAG +
Preference number: 3 (lower is better)
Translates to: REGWAGVWTLSP*AVWTTSISGIE
Trigger: CTCAATTCCAGAGATTGAAGTTGTCCAAACAGCTCATGGGCTTAGTGTCCAAACCCCTGCCCAGCCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR TCA 72 bp GAACAGAAGTCCGGTATTGCCACTGTGGACTGTTTTTaGGGCAAGTTCCCTAATGTGGACAGCCCCACACCT +
Preference number: 3 (lower is better)
Translates to: EQKSGIATVDCF*GKFPNVDSPTP
Trigger: AGGTGTGGGGCTGTCCACATTAGGGAACTTGCCTCAAAAACAGTCCACAGTGGCAATACCGGACTTCTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR GCA 72 bp CCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTaGTCAGTGGCAATGGAAGAGCCAATAAATCAAATC +
Preference number: 3 (lower is better)
Translates to: PQSLAMCLLPGH*SVAMEEPINQI
Trigger: GATTTGATTTATTGGCTCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR GCA 72 bp ATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTaGTCCACCAGAACTAACTGGTCCTCTGTAAAACCC +
Preference number: 3 (lower is better)
Translates to: ISRSRSSTISVF*STRTNWSSVKP
Trigger: GGGTTTTACAGAGGACCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
3UTR CCA 72 bp TCCGTTAAATCAGAGACACACATCACTTCACAAGCATaGCCCAGCCAGCACCACCACCCCCAAAACGAACAA +
Preference number: 3 (lower is better)
Translates to: SVKSETHITSQA*PSQHHHPQNEQ
Trigger: TTGTTCGTTTTGGGGGTGGTGGTGCTGGCTGGGCCATGCTTGTGAAGTGATGTGTGTCTCTGATTTAACGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CCA 72 bp CAATGGCATGTTCCTCTTCGCTGCTGTCATCCAGGGTaGGTCTGTTTAAATGCTTGTCATGAAGGCTGGCCA +
Preference number: 3 (lower is better)
Translates to: QWHVPLRCCHPG*VCLNACHEGWP
Trigger: TGGCCAGCCTTCATGACAAGCATTTAAACAGACCCACCCTGGATGACAGCAGCGAAGAGGAACATGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460655.5
3UTR CCA 72 bp CCACTGTGGACTGTTTTTGAGGCAAGTTCCCTAATGTaGACAGCCCCACACCTAAGAGCAGCAGATCTAACT +
Preference number: 3 (lower is better)
Translates to: PLWTVFEASSLM*TAPHLRAADLT
Trigger: AGTTAGATCTGCTGCTCTTAGGTGTGGGGCTGTCCACATTAGGGAACTTGCCTCAAAAACAGTCCACAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR TCA 72 bp AAACATGTCTGTTTCTCCTTCTACCTCCACTCAACCTaGGCTGCACCCGGACACTTTAAAGGAGGCATGTGT +
Preference number: 3 (lower is better)
Translates to: KHVCFSFYLHST*AAPGHFKGGMC
Trigger: ACACATGCCTCCTTTAAAGTGTCCGGGTGCAGCTCAGGTTGAGTGGAGGTAGAAGGAGAAACAGACATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CAA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAATATATAAGTAATGGATaGAGCAAGGATGGCTGGGGA +
Preference number: 3 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKYISNG*SKDGWG
Trigger: TCCCCAGCCATCCTTGCTCAATCCATTACTTATATA...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR TCA 72 bp GGGTTAAAATCAGATGGGATGAAAGAACACCTGCAGTaGCTCTCAACAGCTACGGAAGTCTCACATTGCAGG +
Preference number: 3 (lower is better)
Translates to: GLKSDGMKEHLQ*LSTATEVSHCR
Trigger: CCTGCAATGTGAGACTTCCGTAGCTGTTGAGAGTCACTGCAGGTGTTCTTTCATCCCATCTGATTTTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR-3UTR CAA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGCATTCCCCGGACCGCTaGAGCAGGACTAGGGAAGGA +
Preference number: 3 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMHSPDR*SRTREG
Trigger: TCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATG...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CCA 72 bp AATATTTCATTCAGGTCAGAAATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGT +
Preference number: 3 (lower is better)
Translates to: NISFRSEMDCTI*RISRSRSSTIS
Trigger: ACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
3UTR-3UTR CAA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACAGCACTTTAAAAAGCTaGAACAGAAGTCCGGTATTG +
Preference number: 3 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHSTLKS*NRSPVL
Trigger: CAATACCGGACTTCTGTTCAAGCTTTTTAAAGTGCT...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CCA 72 bp TTAAAAAGCTTGAACAGAAGTCCGGTATTGCCACTGTaGACTGTTTTTGAGGCAAGTTCCCTAATGTGGACA +
Preference number: 3 (lower is better)
Translates to: LKSLNRSPVLPL*TVFEASSLMWT
Trigger: TGTCCACATTAGGGAACTTGCCTCAAAAACAGTCCACAGTGGCAATACCGGACTTCTGTTCAAGCTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CCA 72 bp GTTTTCAGTTACAATCTTGGGAAAGATCAGGAGCTTTaGAAAACGCGTGGTAAACATGTCTGTTTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: VFSYNLGKDQEL*KTRGKHVCFSF
Trigger: GAAGGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAGATTGTAACTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR GCA 72 bp AAAATAGCATATACACATATAATACTGAACAGCTTCTaGAGTGCCTGTAAACTCTCAGCTCATTTTCTCTTT +
Preference number: 3 (lower is better)
Translates to: KIAYTHIILNSF*SACKLSAHFLF
Trigger: AAAGAGAAAATGAGCTGAGAGTTTACAGGCACTGCAGAAGCTGTTCAGTATTATATGTGTATATGCTATTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACTCGAGGCTGCACCTCTaGGGGCAGCTGGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHSRLHL*GQLAGR
Trigger: GCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGA...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGTCGAGGCTGCACCTCTaGGGGCAGCTGGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRSRLHL*GQLAGR
Trigger: GCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGA...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAACGGCTCGGCAGGGCCTaGACGGCACGCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHERLGRA*TARWHL
Trigger: CAGGTGCCAGCGTGCCGTGCAGGCCCTGCCGAGCCG...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACCTGGTGGAGAGTTCCTaGAGGGCCTGCGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHLVESS*RACASE
Trigger: CTCGCTGGCGCAGGCCCTGCAGGAACTCTCCACCAG...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACGGACTCGAGGGCGCCTaGAGCTCCCTTCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHGLEGA*SSLLGT
Trigger: AGTCCCCAGAAGGGAGCTGCAGGCGCCCTCGAGTCC...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR TCA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACTGGTCTCGAACTCCTaGCCTCGTGACCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAALVSNS*PRDRLG
Trigger: GCCAAGGCGGTCACGAGGTCAGGAGTTCGAGACCAG...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACGAAGACAGCAGGGCCTaGCTCCCCGGCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHEDSRA*LPGLLT
Trigger: AGTGAGAAGGCCGGGGAGGCAGGCCCTGCTGTCTTC...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACTGGTGGAGAGTTCCTaGAGGGCCTGCGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTLVESS*RACASE
Trigger: CTCGCTGGCGCAGGCCCTGCAGGAACTCTCCACCAG...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp AGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGTCGAGGCTGCACCTCTaGGGGCAGCTGGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RFAAPTPSDSSRLHLCGQSRLHL*GQLAGR
Trigger: GCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGA...CTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp CAGCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGGTGCGTGCCGGAAGCTaGTGGAGAGTTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QLAGRRPSPSHPGDPHARVRAGS*WRVPAG
Trigger: CCCTGCAGGAACTCTCCACCAGCTTCCGGCACGCAC...CCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACATTCCCCGGACCGCTTaGGCAGGACTAGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHIPRTA*AGLGKE
Trigger: CTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAAT...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp GGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAGGAGACTGGCCTGGGTaGTCGTTACCTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: GRRPSPSHPGDPHARHTRGDWPG*SLPPRP
Trigger: GGGCCGTGGAGGTAACGATCACCCAGGCCAGTCTCC...TCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCCAGATTCCTCGAGGCTaGACCTCTGCGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGQIPRG*TSAGSW
Trigger: CCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTG...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCAGGAGGAGTCCGTGGATaGAAAGGTTCGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAAGGVRG*KGSLPR
Trigger: TCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp CAGCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGGTCCGCTTCCTGAAATaGCAGGGCCCCTCTAGGACC +
Preference number: 4 (lower is better)
Translates to: QLAGRRPSPSHPGDPHARVRFLK*QGPSRT
Trigger: GGTCCTAGAGGGGCCCTGGCATTTCAGGAAGCGGAC...CCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACGTCCGCTTCCTGAAATaGCAGGGCCCCTCTAGGACC +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHVRFLK*QGPSRT
Trigger: GGTCCTAGAGGGGCCCTGGCATTTCAGGAAGCGGAC...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCGTGCGTGCCGGAAGCTaGTGGAGAGTTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGVRAGS*WRVPAG
Trigger: CCCTGCAGGAACTCTCCACCAGCTTCCGGCACGCAC...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACCCTGAGGTCTGGCTGTaGCTCAGTTTCCGCACCAGA +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHPEVWL*LSFRTR
Trigger: TCTGGTGCGGAAACTGAGTCACAGCCAGACCTCAGG...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR TCA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCATTCCCCGGACCGCTTaGGCAGGACTAGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGIPRTA*AGLGKE
Trigger: CTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAAT...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCACCAGGTCCGCTTCCTaGAATGCCAGGGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGTRSAS*NARAPL
Trigger: TAGAGGGGCCCTGGCATTTCAGGAAGCGGACCTGGT...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAGGAGACTGGCCTGGGTaGTCGTTACCTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHEGDWPG*SLPPRP
Trigger: GGGCCGTGGAGGTAACGATCACCCAGGCCAGTCTCC...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACGGGCTGGAGGTGATGTaGCTACTCACTTGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHGLEVM*LLTCSA
Trigger: AGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCC...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp GGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCCGGCTCGGCAGGGCCTaGACGGCACGCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: GVRGCKGSLPRRPQIPRGRLGRA*TARWHL
Trigger: CAGGTGCCAGCGTGCCGTGCAGGCCCTGCCGAGCCG...GCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCCGGCTCGGCAGGGCCTaGACGGCACGCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALRLGRA*TARWHL
Trigger: CAGGTGCCAGCGTGCCGTGCAGGCCCTGCCGAGCCG...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCATCGAGGCTGCACCTCTaGGGGCAGCTGGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPSRLHL*GQLAGR
Trigger: GCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGA...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACAGTCCGCTTCCTGAAATaGCAGGGCCCCTCTAGGACC +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTVRFLK*QGPSRT
Trigger: GGTCCTAGAGGGGCCCTGGCATTTCAGGAAGCGGAC...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGTTCTCGTGGCCCGGCTaGCCCACCCTTTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRFSWPG*PTLSRK
Trigger: CTTCCGTGAAAGGGTGGGCCAGCCGGGCCACGAGAA...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACCCATGGGGACACACTaGCTGAGTCTGGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAAPMGTH*LSLVAF
Trigger: GAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGG...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGATTCCCCGGACCGCTTaGGCAGGACTAGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRIPRTA*AGLGKE
Trigger: CTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAAT...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp CCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCCTACTTTGGCGGTCTaGCCCACGCTCACACAAACG +
Preference number: 4 (lower is better)
Translates to: PDALRFLEAAPLRAAGGAPTLAV*PTLTQT
Trigger: CGTTTGTGTGAGCGTGGGTCAGACCGCCAAAGTAGG...CGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTAGCAGGCTGCCGGCCTaGAGGAAGACAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VRCPDALRFLEAAPLRAASRLPA*RKTAGP
Trigger: AGGCCCTGCTGTCTTCCTGCAGGCCGGCAGCCTGCT...AGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGACGGCTCGGCAGGGCCTaGACGGCACGCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRRLGRA*TARWHL
Trigger: CAGGTGCCAGCGTGCCGTGCAGGCCCTGCCGAGCCG...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCGGCTCGGCAGGGCCTaGACGGCACGCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: GKEESVDAKVRCPDALRFRLGRA*TARWHL
Trigger: CAGGTGCCAGCGTGCCGTGCAGGCCCTGCCGAGCCG...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp TGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCCGGCTCGGCAGGGCCTaGACGGCACGCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: WMQRFAAPTPSDSSRLHLRLGRA*TARWHL
Trigger: CAGGTGCCAGCGTGCCGTGCAGGCCCTGCCGAGCCG...GAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAGGAGGAGTCCGTGGATaGAAAGGTTCGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: GRRPSPSHPGDPHARHTRGGVRG*KGSLPR
Trigger: TCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC...TCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCGGAAGGAGGAGTCCGTaGATGCAAAGGTTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGGRRSP*MQRFAA
Trigger: GGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCC...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACCCACCAATGGCTACCTaGAGGTGGCACCAACTTGGA +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHPPMAT*RWHQLG
Trigger: TCCAAGTTGGTGCCACCTCCAGGTAGCCATTGGTGG...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACATCACTTCACAAGCATaGCCCAGCCAGCACCACCAC +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHITSQA*PSQHHH
Trigger: GTGGTGGTGCTGGCTGGGCCATGCTTGTGAAGTGAT...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CAGCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCTTCTGGATCTAAGCTaGTGCCTGACACCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: QLAGRRPSPSHPGDPHARLLDLS*CLTPVP
Trigger: TGGCACTGGTGTCAGGCATCAGCTTAGATCCAGAAG...CCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACCTTCTGGATCTAAGCTaGTGCCTGACACCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHLLDLS*CLTPVP
Trigger: TGGCACTGGTGTCAGGCATCAGCTTAGATCCAGAAG...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAGAACTCCTGACCTCGTaGCCGCCTTGGCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: GRRPSPSHPGDPHARHTRELLTS*PPWPLK
Trigger: TTTGAGAGGCCAAGGCGGTCACGAGGTCAGGAGTTC...TCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACATACCTCCACTCAACCTaGGCTGCACCCGGACACTTT +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTYLHST*AAPGHF
Trigger: AAAGTGTCCGGGTGCAGCTCAGGTTGAGTGGAGGTA...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCTCGGCTAACAGCTGCTaGGGCCCTGCCCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPSANSC*GPARPP
Trigger: AGGAGGTCGGGCAGGGCCTCAGCAGCTGTTAGCCGA...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359617.8
ENST00000361830.7
CDS-3UTR GCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACATGTTCCTCTTCGCTaGTGTCATCCAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTHVPLR*CHPGWV
Trigger: GACCCACCCTGGATGACAGCAGCGAAGAGGAACATG...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp CCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCATGTTCCTCTTCGCTaGTGTCATCCAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: PDALRFLEAAPLRAAGGAHVPLR*CHPGWV
Trigger: GACCCACCCTGGATGACAGCAGCGAAGAGGAACATG...CGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCCTGGTGGAGAGTTCCTaGAGGGCCTGCGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPLVESS*RACASE
Trigger: CTCGCTGGCGCAGGCCCTGCAGGAACTCTCCACCAG...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACCTTGGCAATGTGCCTaGTTCCTGGGCATTGCTCAG +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTPWQCA*FLGIAQ
Trigger: CTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGG...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGCGTGCCGGAAGCTGGTaGAGAGTTCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLRAGSW*RVPAGP
Trigger: AGGCCCTGCAGGAACTCTCCACCAGCTTCCGGCACG...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp GTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGTGCGTGCCGGAAGCTaGTGGAGAGTTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VRCPDALRFLEAAPLRAAVRAGS*WRVPAG
Trigger: CCCTGCAGGAACTCTCCACCAGCTTCCGGCACGCAC...AGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp ACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCGCCAGGCTTGGGGCCTaGACTCGAGGGCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: THSPDRLSRTREGGVRGCARLGA*TRGRLQ
Trigger: CTGCAGGCGCCCTCGAGTCCAGGCCCCAAGCCTGGC...GCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAATCCGGCTCTAGACTaGGAGGCCCTGAAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHENPALD*EALKPP
Trigger: AGGGGGCTTCAGGGCCTCCCAGTCTAGAGCCGGATT...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGTTCTCGTGGCCCGGCTaGCCCACCCTTTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLFSWPG*PTLSRK
Trigger: CTTCCGTGAAAGGGTGGGCCAGCCGGGCCACGAGAA...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCTGGATTGAGCAAGGATaGCTGGGGATACCCATGGGG +
Preference number: 4 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGWIEQG*LGIPMG
Trigger: CCCCATGGGTATCCCCAGCCATCCTTGCTCAATCCA...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CAGCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGTTGGAAAGGGAAGGCTaGGCAGGGGTTTGGACACTA +
Preference number: 4 (lower is better)
Translates to: QLAGRRPSPSHPGDPHARLEREG*AGVWTL
Trigger: TAGTGTCCAAACCCCTGCCCAGCCTTCCCTTTCCAA...CCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACCACCAATGGCTACCTaGAGGTGGCACCAACTTGGA +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTPPMAT*RWHQLG
Trigger: TCCAAGTTGGTGCCACCTCCAGGTAGCCATTGGTGG...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCATGGCCTCTCAAAGTCTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAAWPLKV*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAGACTTTGAGAGGCCA...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGACAGAGGAGACTGGCCTaGGTGATCGTTACCTCCACG +
Preference number: 4 (lower is better)
Translates to: GRRPSPSHPGDPHARHTRQRRLA*VIVTST
Trigger: CGTGGAGGTAACGATCACCCAGGCCAGTCTCCTCTG...TCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACAATCACTTCACAAGCATaGCCCAGCCAGCACCACCAC +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTITSQA*PSQHHH
Trigger: GTGGTGGTGCTGGCTGGGCCATGCTTGTGAAGTGAT...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACCACCTGTGGAAGAGCTaGGTGATCTCTTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHHLWKS*VISWVV
Trigger: AACTACCCAAGAGATCACTCAGCTCTTCCACAGGTG...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp GTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGCGTTTGAGGTAGCCTaGCTGTGCGTGCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: VRCPDALRFLEAAPLRAAAFEVA*LCVPEA
Trigger: AGCTTCCGGCACGCACAGTCAGGCTACCTCAAACGC...AGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp AGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGGCGTTTGAGGTAGCCTaGCTGTGCGTGCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RFAAPTPSDSSRLHLCGQAFEVA*LCVPEA
Trigger: AGCTTCCGGCACGCACAGTCAGGCTACCTCAAACGC...CTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp AGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGATTCCCCGGACCGCTTaGGCAGGACTAGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RFAAPTPSDSSRLHLCGQIPRTA*AGLGKE
Trigger: CTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAAT...CTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGACCAGGTCCGCTTCCTaGAATGCCAGGGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLTRSAS*NARAPL
Trigger: TAGAGGGGCCCTGGCATTTCAGGAAGCGGACCTGGT...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACGAGTGTGGAAAAACATaGGGTGCCCACAGACAATGG +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHECGKT*GAHRQW
Trigger: CCATTGTCTGTGGGCACCTCATGTTTTTCCACACTC...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCGGAGACTGGCCTGGGTaGTCGTTACCTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALGDWPG*SLPPRP
Trigger: GGGCCGTGGAGGTAACGATCACCCAGGCCAGTCTCC...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGTACCTCCACTCAACCTaGGCTGCACCCGGACACTTT +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRYLHST*AAPGHF
Trigger: AAAGTGTCCGGGTGCAGCTCAGGTTGAGTGGAGGTA...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCAAAAAAGATGCAGCTGTaGGCTTCGCCAAGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAAKKMQL*ASPRRR
Trigger: TCTACGCCTTGGCGAAGCGCACAGCTGCATCTTTTT...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGGAGGAGTCCGTGGATaGAAAGGTTCGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLGGVRG*KGSLPR
Trigger: TCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp CCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCTGCTTCCTGGGCATTaGTCAGTGGCAATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PDALRFLEAAPLRAAGGALLPGH*SVAMEE
Trigger: CTCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAG...CGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACAGCAATGCTACGTGAATaGAGAGGGCTGGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTAMLRE*RGLEVM
Trigger: CATCACCTCCAGCCCTCTGCATTCACGTAGCATTGC...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAACCAGCTCCGCAGCAATaGTACGTGAATGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHEPAPQQ*YVNAEG
Trigger: GCCCTCTGCATTCACGTAGCATTGCTGCGGAGCTGG...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359617.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGACCCCTTCCTTTCCTaGACGGCCTGGTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLDPFLS*TAWSST
Trigger: AGTGGAGGACCAGGCCGTCCAGGAAAGGAAGGGGTC...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR CCA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACCCACTTAGGAGGTaGCCGTTTTGTCACACCAAT +
Preference number: 4 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAAHPLRR*PFCHTN
Trigger: ATTGGTGTGACAAAACGGCCACCTCCTAAGTGGGTG...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp ACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAACCGGAGCCAGGCTTaGGGCCTGGACTCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: THSPDRLSRTREGGVRGCNRSQA*GLDSRA
Trigger: CGCCCTCGAGTCCAGGCCCCAAGCCTGGCTCCGGTT...GCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCAAACCGGAGCCAGGCTTaGGGCCTGGACTCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAANRSQA*GLDSRA
Trigger: CGCCCTCGAGTCCAGGCCCCAAGCCTGGCTCCGGTT...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CCA 90 bp GTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTAATCCGGCTCTAGACTaGGAGGCCCTGAAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: VRCPDALRFLEAAPLRAANPALD*EALKPP
Trigger: AGGGGGCTTCAGGGCCTCCCAGTCTAGAGCCGGATT...AGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAGGAAGGAGGAGTCCGTaGATGCAAAGGTTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHEGRRSP*MQRFAA
Trigger: GGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCC...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCTTGGAAAGGGAAGGCTaGGCAGGGGTTTGGACACTA +
Preference number: 4 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGLEREG*AGVWTL
Trigger: TAGTGTCCAAACCCCTGCCCAGCCTTCCCTTTCCAA...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCAGCAAGTTCCCTAATGTaGACAGCCCCACACCTAAGA +
Preference number: 4 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAAASSLM*TAPHLR
Trigger: TCTTAGGTGTGGGGCTGTCCACATTAGGGAACTTGC...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACGGCCAACATCATACTaGATTTCATCCACTCCATCC +
Preference number: 4 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAARPTSY*ISSTPS
Trigger: GGATGGAGTGGATGAAATTCAGTATGATGTTGGCCG...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACACCTGTGGAAGAGCTaGGTGATCTCTTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTHLWKS*VISWVV
Trigger: AACTACCCAAGAGATCACTCAGCTCTTCCACAGGTG...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACAGATTCTTCATGCGTTTaGGGTAGCCTGACTGTGCGT +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTDSSCV*GSLTVR
Trigger: ACGCACAGTCAGGCTACCTCAAACGCATGAAGAATC...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGCCTACTTTGGCGGTCTaGCCCACGCTCACACAAACG +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLPTLAV*PTLTQT
Trigger: CGTTTGTGTGAGCGTGGGTCAGACCGCCAAAGTAGG...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CAGCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGTGGACACTAAGCCCATaGGCTGTTTGGACAACTTCA +
Preference number: 4 (lower is better)
Translates to: QLAGRRPSPSHPGDPHARWTLSP*AVWTTS
Trigger: TGAAGTTGTCCAAACAGCTCATGGGCTTAGTGTCCA...CCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCCTGGTCTCGAACTCCTaGCCTCGTGACCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VRGCKGSLPRRPQIPRGCLVSNS*PRDRLG
Trigger: GCCAAGGCGGTCACGAGGTCAGGAGTTCGAGACCAG...GCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCATTCCTCAAATGCTACTaGTCTCTCCCCAAGTACAGG +
Preference number: 4 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAAFLKCY*SLPKYR
Trigger: CCTGTACTTGGGGAGAGATCAGTAGCATTTGAGGAA...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCGAGTGTGGAAAAACATaGGGTGCCCACAGACAATGG +
Preference number: 4 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGECGKT*GAHRQW
Trigger: CCATTGTCTGTGGGCACCTCATGTTTTTCCACACTC...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGAGCAGGCTGCCGGCCTaGAGGAAGACAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLSRLPA*RKTAGP
Trigger: AGGCCCTGCTGTCTTCCTGCAGGCCGGCAGCCTGCT...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCAAGCAGGCTGCCGGCCTaGAGGAAGACAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAASRLPA*RKTAGP
Trigger: AGGCCCTGCTGTCTTCCTGCAGGCCGGCAGCCTGCT...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp AGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTAGCAGGCTGCCGGCCTaGAGGAAGACAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RTREGGVRGCKGSLPRRPSRLPA*RKTAGP
Trigger: AGGCCCTGCTGTCTTCCTGCAGGCCGGCAGCCTGCT...AGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp ATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCCCACTGCCAGCAGGCTaGCGGCCTGCAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: MQRFAAPTPSDSSRLHLCPLPAG*RPAGRQ
Trigger: CTGTCTTCCTGCAGGCCGGCAGCCTGCTGGCAGTGG...GCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp AGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCCACTGCCAGCAGGCTaGCGGCCTGCAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: RTREGGVRGCKGSLPRRPPLPAG*RPAGRQ
Trigger: CTGTCTTCCTGCAGGCCGGCAGCCTGCTGGCAGTGG...AGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTGGTGGAGAGTTCCTaGAGGGCCTGCGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GKEESVDAKVRCPDALRFLVESS*RACASE
Trigger: CTCGCTGGCGCAGGCCCTGCAGGAACTCTCCACCAG...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGCCAGCTCCGCAGCAATaGTACGTGAATGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLPAPQQ*YVNAEG
Trigger: GCCCTCTGCATTCACGTAGCATTGCTGCGGAGCTGG...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359617.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAGACCCCTTCCTTTCCTaGACGGCCTGGTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPDPFLS*TAWSST
Trigger: AGTGGAGGACCAGGCCGTCCAGGAAAGGAAGGGGTC...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR CCA 90 bp GTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCCGTGCCGGAAGCTGGTaGAGAGTTCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VRGCKGSLPRRPQIPRGCRAGSW*RVPAGP
Trigger: AGGCCCTGCAGGAACTCTCCACCAGCTTCCGGCACG...GCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCGTGCGTGCCGGAAGCTaGTGGAGAGTTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALVRAGS*WRVPAG
Trigger: CCCTGCAGGAACTCTCCACCAGCTTCCGGCACGCAC...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGGATGAAGTCCTACTTTaGCGGTCTGACCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRDEVLL*RSDPRS
Trigger: TGAGCGTGGGTCAGACCGCCAAAGTAGGACTTCATC...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGGAGGTGGCACCAACTTaGAAAGGGAAGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RFAAPTPSDSSRLHLCGQEVAPT*KGKAGQ
Trigger: CTGCCCAGCCTTCCCTTTCCAAGTTGGTGCCACCTC...CTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGGTGCCCACAGACAATaGCTGCCAGCGAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLGAHRQ*LPASKG
Trigger: CCCTTTACTCGCTGGCAGCCATTGTCTGTGGGCACC...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGCAGAGGAGACTGGCCTaGGTGATCGTTACCTCCACG +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLQRRLA*VIVTST
Trigger: CGTGGAGGTAACGATCACCCAGGCCAGTCTCCTCTG...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAACTTCTGGATCTAAGCTaGTGCCTGACACCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHELLDLS*CLTPVP
Trigger: TGGCACTGGTGTCAGGCATCAGCTTAGATCCAGAAG...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAGATTCTTCATGCGTTTaGGGTAGCCTGACTGTGCGT +
Preference number: 4 (lower is better)
Translates to: GRRPSPSHPGDPHARHTRDSSCV*GSLTVR
Trigger: ACGCACAGTCAGGCTACCTCAAACGCATGAAGAATC...TCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp CAGCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGACTGTGGACTGTTTTTaGGGCAAGTTCCCTAATGTG +
Preference number: 4 (lower is better)
Translates to: QLAGRRPSPSHPGDPHARTVDCF*GKFPNV
Trigger: CACATTAGGGAACTTGCCTCAAAAACAGTCCACAGT...CCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCCTGGTCTCGAACTCCTaGCCTCGTGACCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: THSPDRLSRTREGGVRGCLVSNS*PRDRLG
Trigger: GCCAAGGCGGTCACGAGGTCAGGAGTTCGAGACCAG...GCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCCTGGTCTCGAACTCCTaGCCTCGTGACCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: WMQRFAAPTPSDSSRLHLLVSNS*PRDRLG
Trigger: GCCAAGGCGGTCACGAGGTCAGGAGTTCGAGACCAG...GAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCGGGCTGGAGGTGATGTaGCTACTCACTTGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPGLEVM*LLTCSA
Trigger: AGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCC...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR TCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLAEGWR*CDYSLA
Trigger: AGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGC...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp CCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGGTGGAGAGTTCCTaGAGGGCCTGCGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PDRLSRTREGGVRGCKGSLVESS*RACASE
Trigger: CTCGCTGGCGCAGGCCCTGCAGGAACTCTCCACCAG...CGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp CCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGACCATCAGTGTGTTCTaGTCCACCAGAACTAACTGG +
Preference number: 4 (lower is better)
Translates to: PDALRFLEAAPLRAAGGATISVF*STRTNW
Trigger: CCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGT...CGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACAACCATCAGTGTGTTCTaGTCCACCAGAACTAACTGG +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTTISVF*STRTNW
Trigger: CCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGT...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCTCAAGCCAAAAAGATaGAGCTGTGCGCTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRLKPKR*SCALRQ
Trigger: TTGGCGAAGCGCACAGCTGCATCTTTTTGGCTTGAG...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCTGCTCGGCTAACAGCTaGCGGTTTTGGATGGAATTA +
Preference number: 4 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGCSANS*RFWMEL
Trigger: TAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCA...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACATGCTCGGCTAACAGCTaGCGGTTTTGGATGGAATTA +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTCSANS*RFWMEL
Trigger: TAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCA...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACCACACGAAAACCCAATaGCACTTATCGAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHHTKTQ*HLSRLH
Trigger: GTGAAGTCTCGATAAGTGGCATTGGGTTTTCGTGTG...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGACAGATTCCTCGAGGCTaGACCTCTGCGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRQIPRG*TSAGSW
Trigger: CCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTG...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACAGATTCCTCGAGGCTaGACCTCTGCGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAAQIPRG*TSAGSW
Trigger: CCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTG...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp AGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCAGATTCCTCGAGGCTaGACCTCTGCGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSPWMQRFAAPTPSDSSRQIPRG*TSAGSW
Trigger: CCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTG...CCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCAGATTCCTCGAGGCTaGACCTCTGCGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GKEESVDAKVRCPDALRFQIPRG*TSAGSW
Trigger: CCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTG...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp ATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCCAGATTCCTCGAGGCTaGACCTCTGCGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: MQRFAAPTPSDSSRLHLCQIPRG*TSAGSW
Trigger: CCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTG...GCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCGATGCAAAGGTTCGCTaGCCCGACGCCCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPDAKVR*PDALRF
Trigger: GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAACTGCTTCCTGGGCATTaGTCAGTGGCAATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHELLPGH*SVAMEE
Trigger: CTCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAG...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACATTCAAGCTATTCTCCTaGCTCAGCCTCTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTFKLFS*LSLLSS
Trigger: GCTACTCAAGAGGCTGAGGCAGGAGAATAGCTTGAA...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGTGGAAAAACATGAGGTaGCCACAGACAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRWKNMR*PQTMAA
Trigger: GGCAGCCATTGTCTGTGGGCACCTCATGTTTTTCCA...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCACATGTGTCCAGAGGCTaGATCCAGGGATGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPHVSRG*IQGCPE
Trigger: CTCTGGGCATCCCTGGATGCAGCCTCTGGACACATG...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCCATGTGTCCAGAGGCTaGATCCAGGGATGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPHVSRG*IQGCPE
Trigger: CTCTGGGCATCCCTGGATGCAGCCTCTGGACACATG...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp TGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCATCCCCGGATCTGACTaGAGCTCAGCCCCGGACCGT +
Preference number: 4 (lower is better)
Translates to: WMQRFAAPTPSDSSRLHLIPGSD*SSAPDR
Trigger: ACGGTCCGGGGCTGAGCTGCAGTCAGATCCGGGGAT...GAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361830.7
CDS-3UTR CCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCGACCCCTTCCTTTCCTaGACGGCCTGGTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALDPFLS*TAWSST
Trigger: AGTGGAGGACCAGGCCGTCCAGGAAAGGAAGGGGTC...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR CCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGACGTGCCGGAAGCTGGTaGAGAGTTCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRRAGSW*RVPAGP
Trigger: AGGCCCTGCAGGAACTCTCCACCAGCTTCCGGCACG...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCGTGCCGGAAGCTGGTaGAGAGTTCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GKEESVDAKVRCPDALRFRAGSW*RVPAGP
Trigger: AGGCCCTGCAGGAACTCTCCACCAGCTTCCGGCACG...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp TGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCCGTGCCGGAAGCTGGTaGAGAGTTCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: WMQRFAAPTPSDSSRLHLRAGSW*RVPAGP
Trigger: AGGCCCTGCAGGAACTCTCCACCAGCTTCCGGCACG...GAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp ATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCCGTGCCGGAAGCTGGTaGAGAGTTCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: MQRFAAPTPSDSSRLHLCRAGSW*RVPAGP
Trigger: AGGCCCTGCAGGAACTCTCCACCAGCTTCCGGCACG...GCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGTGCCGGAAGCTGGTaGAGAGTTCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLRAGSW*RVPAGP
Trigger: AGGCCCTGCAGGAACTCTCCACCAGCTTCCGGCACG...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp TGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCGTGCGTGCCGGAAGCTaGTGGAGAGTTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: WMQRFAAPTPSDSSRLHLVRAGS*WRVPAG
Trigger: CCCTGCAGGAACTCTCCACCAGCTTCCGGCACGCAC...GAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp GGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: GRRPSPSHPGDPHARHTRMDCTI*RISRSR
Trigger: GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCAT...TCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGTCCGCACCAGAGGCCTaGCCTAGGCCCTCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: SPWMQRFAAPTPSDSSRLSAPEA*PRPSLD
Trigger: GTCCAAAGAGGGCCTAGGCCAGGCCTCTGGTGCGGA...CAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CCA 90 bp ACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCTCCGCACCAGAGGCCTaGCCTAGGCCCTCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: THSPDRLSRTREGGVRGCSAPEA*PRPSLD
Trigger: GTCCAAAGAGGGCCTAGGCCAGGCCTCTGGTGCGGA...GCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCAAATCCGGCTCTAGACTaGGAGGCCCTGAAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPNPALD*EALKPP
Trigger: AGGGGGCTTCAGGGCCTCCCAGTCTAGAGCCGGATT...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCTTCTCGTGGCCCGGCTaGCCCACCCTTTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCFSWPG*PTLSRK
Trigger: CTTCCGTGAAAGGGTGGGCCAGCCGGGCCACGAGAA...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTTGGATTGAGCAAGGATaGCTGGGGATACCCATGGGG +
Preference number: 4 (lower is better)
Translates to: VRCPDALRFLEAAPLRAAWIEQG*LGIPMG
Trigger: CCCCATGGGTATCCCCAGCCATCCTTGCTCAATCCA...AGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCGAGGTGGCACCAACTTaGAAAGGGAAGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPEVAPT*KGKAGQ
Trigger: CTGCCCAGCCTTCCCTTTCCAAGTTGGTGCCACCTC...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACAGCAGCAGATCTAACTTaGAACGTCTCAACCATGGGT +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTAADLT*NVSTMG
Trigger: ACCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGC...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAATGGCCTCTCAAAGTCTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHEWPLKV*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAGACTTTGAGAGGCCA...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTTCTGGATCTAAGCTaGTGCCTGACACCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: RFAAPTPSDSSRLHLCGQLLDLS*CLTPVP
Trigger: TGGCACTGGTGTCAGGCATCAGCTTAGATCCAGAAG...CTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCGGCCAACATCATACTaGATTTCATCCACTCCATCC +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRRPTSY*ISSTPS
Trigger: GGATGGAGTGGATGAAATTCAGTATGATGTTGGCCG...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCGCGTTTGAGGTAGCCTaGCTGTGCGTGCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GKEESVDAKVRCPDALRFAFEVA*LCVPEA
Trigger: AGCTTCCGGCACGCACAGTCAGGCTACCTCAAACGC...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp GTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCCCTGAGGTCTGGCTGTaGCTCAGTTTCCGCACCAGA +
Preference number: 4 (lower is better)
Translates to: VRGCKGSLPRRPQIPRGCPEVWL*LSFRTR
Trigger: TCTGGTGCGGAAACTGAGTCACAGCCAGACCTCAGG...GCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR TCA 90 bp GGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGATCGCCCCTAAGTCCCTaGATATTTCATTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GRRPSPSHPGDPHARHTRSPLSP*IFHSGQ
Trigger: CTGACCTGAATGAAATATTCAGGGACTTAGGGGCGA...TCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCATTCCCCGGACCGCTTaGGCAGGACTAGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: THSPDRLSRTREGGVRGCIPRTA*AGLGKE
Trigger: CTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAAT...GCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAACCAGGTCCGCTTCCTaGAATGCCAGGGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRTRSAS*NARAPL
Trigger: TAGAGGGGCCCTGGCATTTCAGGAAGCGGACCTGGT...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCGAACTCCTGACCTCGTaGCCGCCTTGGCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: GVRGCKGSLPRRPQIPRGELLTS*PPWPLK
Trigger: TTTGAGAGGCCAAGGCGGTCACGAGGTCAGGAGTTC...GCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGATTCCTCAAATGCTACTaGTCTCTCCCCAAGTACAGG +
Preference number: 4 (lower is better)
Translates to: GRRPSPSHPGDPHARHTRFLKCY*SLPKYR
Trigger: CCTGTACTTGGGGAGAGATCAGTAGCATTTGAGGAA...TCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCAAAGGGAAAGAAACCCTaGGGTACCATGATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAAKGKKP*GTMILF
Trigger: GAAAAGAATCATGGTACCTCAGGGTTTCTTTCCCTT...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCTACCTCCACTCAACCTaGGCTGCACCCGGACACTTT +
Preference number: 4 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPYLHST*AAPGHF
Trigger: AAAGTGTCCGGGTGCAGCTCAGGTTGAGTGGAGGTA...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCATACCTCCACTCAACCTaGGCTGCACCCGGACACTTT +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPYLHST*AAPGHF
Trigger: AAAGTGTCCGGGTGCAGCTCAGGTTGAGTGGAGGTA...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCCGCAGCAATGCTACGTaGATGCAGAGGGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALRSNAT*MQRAGG
Trigger: ACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCG...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCGGAGGAGTCCGTGGATaGAAAGGTTCGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCGGVRG*KGSLPR
Trigger: TCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGAGGAGTCCGTGGATaGAAAGGTTCGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRGGVRG*KGSLPR
Trigger: TCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp ACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCGGAGGAGTCCGTGGATaGAAAGGTTCGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: THSPDRLSRTREGGVRGCGGVRG*KGSLPR
Trigger: TCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC...GCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCACCTTGGCAATGTGCCTaGTTCCTGGGCATTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPPWQCA*FLGIAQ
Trigger: CTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGG...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCACAGAAGTCCGGTATTaGCACTGTGGACTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGTEVRY*HCGLFL
Trigger: CAAAAACAGTCCACAGTGGCAATACCGGACTTCTGT...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCCCACAGACAATGGCTaGCAGCGAGTAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RFAAPTPSDSSRLHLCGQPTDNG*QRVKGK
Trigger: CTTTCCCTTTACTCGCTGGCAGCCATTGTCTGTGGG...CTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAATGGAAAAACATGAGGTaGCCACAGACAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHEWKNMR*PQTMAA
Trigger: GGCAGCCATTGTCTGTGGGCACCTCATGTTTTTCCA...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCACATGTGTCCAGAGGCTaGATCCAGGGATGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPHVSRG*IQGCPE
Trigger: CTCTGGGCATCCCTGGATGCAGCCTCTGGACACATG...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAACACCCACTTAGGAGGTaGCCGTTTTGTCACACCAAT +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHEHPLRR*PFCHTN
Trigger: ATTGGTGTGACAAAACGGCCACCTCCTAAGTGGGTG...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp AGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGGGCCTAGGCCCTCTTTaGACAACCGGAGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SPWMQRFAAPTPSDSSRLGLGPL*TTGARL
Trigger: AAGCCTGGCTCCGGTTGTCCAAAGAGGGCCTAGGCC...CAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCCGGTTAAACGCCTGGTaGCCATGTCTCACCCTTTGC +
Preference number: 4 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPRLNAW*PCLTLC
Trigger: GCAAAGGGTGAGACATGGCCACCAGGCGTTTAACCG...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCAGGAAGGAGGAGTCCGTaGATGCAAAGGTTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPGRRSP*MQRFAA
Trigger: GGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCC...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCATTGAGCAAGGATGGCTaGGGATACCCATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPLSKDG*GYPWGH
Trigger: GTGTCCCCATGGGTATCCCCAGCCATCCTTGCTCAA...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCAGAGGTGGCACCAACTTaGAAAGGGAAGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPEVAPT*KGKAGQ
Trigger: CTGCCCAGCCTTCCCTTTCCAAGTTGGTGCCACCTC...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CAGCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGGGAACGTCTCAACCATaGGTTAAAATCAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: QLAGRRPSPSHPGDPHARGTSQP*VKIRWD
Trigger: ATCCCATCTGATTTTAACCCATGGTTGAGACGTTCC...CCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGGCAGCAGATCTAACTTaGAACGTCTCAACCATGGGT +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRAADLT*NVSTMG
Trigger: ACCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGC...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTTGGCCTCTCAAAGTCTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VRCPDALRFLEAAPLRAAWPLKV*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAGACTTTGAGAGGCCA...AGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCGGTGCCCACAGACAATaGCTGCCAGCGAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: VRGCKGSLPRRPQIPRGCGAHRQ*LPASKG
Trigger: CCCTTTACTCGCTGGCAGCCATTGTCTGTGGGCACC...GCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCGGCCCAGTAGAGTGTaGAAAAACATGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RFAAPTPSDSSRLHLCGQRPSRV*KNMRCP
Trigger: TGGGCACCTCATGTTTTTCCACACTCTACTGGGCCG...CTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGATTCTTCATGCGTTTaGGGTAGCCTGACTGTGCGT +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLDSSCV*GSLTVR
Trigger: ACGCACAGTCAGGCTACCTCAAACGCATGAAGAATC...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTACTTTGGCGGTCTaGCCCACGCTCACACAAACG +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAAPTLAV*PTLTQT
Trigger: CGTTTGTGTGAGCGTGGGTCAGACCGCCAAAGTAGG...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCCTACTTTGGCGGTCTaGCCCACGCTCACACAAACG +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCPTLAV*PTLTQT
Trigger: CGTTTGTGTGAGCGTGGGTCAGACCGCCAAAGTAGG...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGACCTACTTTGGCGGTCTaGCCCACGCTCACACAAACG +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRPTLAV*PTLTQT
Trigger: CGTTTGTGTGAGCGTGGGTCAGACCGCCAAAGTAGG...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CAGCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGGAGAGACATTTTGTGTaGCTGGTCCAAATAAAACAG +
Preference number: 4 (lower is better)
Translates to: QLAGRRPSPSHPGDPHARERHFV*LVQIKQ
Trigger: CTGTTTTATTTGGACCAGTCACACAAAATGTCTCTC...CCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCCTCACATTGCAGGGCTaGCTGATGAGGTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALLTLQG*LMRCWL
Trigger: AAGCCAGCACCTCATCAGTCAGCCCTGCAATGTGAG...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGACTGTGGACTGTTTTTaGGGCAAGTTCCCTAATGTG +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRTVDCF*GKFPNV
Trigger: CACATTAGGGAACTTGCCTCAAAAACAGTCCACAGT...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGATTTACCCAAATGGGTTaGGGGAACAAAAACCAACCC +
Preference number: 4 (lower is better)
Translates to: GRRPSPSHPGDPHARHTRFTQMG*GNKNQP
Trigger: GGGTTGGTTTTTGTTCCCTCAACCCATTTGGGTAAA...TCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCGAACTCCTGACCTCGTaGCCGCCTTGGCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: THSPDRLSRTREGGVRGCELLTS*PPWPLK
Trigger: TTTGAGAGGCCAAGGCGGTCACGAGGTCAGGAGTTC...GCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCGAACTCCTGACCTCGTaGCCGCCTTGGCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCELLTS*PPWPLK
Trigger: TTTGAGAGGCCAAGGCGGTCACGAGGTCAGGAGTTC...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGAACTCCTGACCTCGTaGCCGCCTTGGCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRELLTS*PPWPLK
Trigger: TTTGAGAGGCCAAGGCGGTCACGAGGTCAGGAGTTC...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCTCAGTGGAGACTGGCCTGGGTaGTCGTTACCTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: VKMPPVLGNVPASWALLSGDWPG*SLPPRP
Trigger: GGGCCGTGGAGGTAACGATCACCCAGGCCAGTCTCC...ACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCTGGAGGTGATGTaGCTACTCACTTGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: MQRFAAPTPSDSSRLHLCGLEVM*LLTCSA
Trigger: AGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCC...GCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR TCA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCGCAGCAATGCTACGTaGATGCAGAGGGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GKEESVDAKVRCPDALRFRSNAT*MQRAGG
Trigger: ACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCG...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp CTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAGCAGGCTGCCGGCCTaGAGGAAGACAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LANLSFPLFHHQCVLLHQSRLPA*RKTAGP
Trigger: AGGCCCTGCTGTCTTCCTGCAGGCCGGCAGCCTGCT...CTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476384.5
ENST00000483434.5
CDS-3UTR GCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCCATGTTCCTCTTCGCTaGTGTCATCCAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALHVPLR*CHPGWV
Trigger: GACCCACCCTGGATGACAGCAGCGAAGAGGAACATG...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGAGATGCAAAGGTTCGCTaGCCCGACGCCCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRDAKVR*PDALRF
Trigger: GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGATGCAAAGGTTCGCTaGCCCGACGCCCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRDAKVR*PDALRF
Trigger: GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCAGATGCAAAGGTTCGCTaGCCCGACGCCCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAADAKVR*PDALRF
Trigger: GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACTCAATCTCTATTGTaGAGCAGTATCAAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHTQSLL*SSIKGP
Trigger: AGGACCTTTGATACTGCTGCACAATAGAGATTGAGT...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCACCCACAGACAATGGCTaGCAGCGAGTAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPPTDNG*QRVKGK
Trigger: CTTTCCCTTTACTCGCTGGCAGCCATTGTCTGTGGG...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp ATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCCATGTGTCCAGAGGCTaGATCCAGGGATGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: MQRFAAPTPSDSSRLHLCHVSRG*IQGCPE
Trigger: CTCTGGGCATCCCTGGATGCAGCCTCTGGACACATG...GCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCACCCACTTAGGAGGTaGCCGTTTTGTCACACCAAT +
Preference number: 4 (lower is better)
Translates to: RFAAPTPSDSSRLHLCGQHPLRR*PFCHTN
Trigger: ATTGGTGTGACAAAACGGCCACCTCCTAAGTGGGTG...CTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACAGCTTGTCATGAAGGCTaGCCAATTCTTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTACHEG*PILSSS
Trigger: AGAAGATGAAAGAATTGGCCAGCCTTCATGACAAGC...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGTGCTGTCATCCAGGGTaGGTCTGTTTAAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRCCHPG*VCLNAC
Trigger: ACAAGCATTTAAACAGACCCACCCTGGATGACAGCA...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp GTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: VRCPDALRFLEAAPLRAAMDCTI*RISRSR
Trigger: GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCAT...AGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: RFAAPTPSDSSRLHLCGQMDCTI*RISRSR
Trigger: GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCAT...CTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCCATTCAGGTCAGAAATaGACTGTACAATCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGHSGQK*TVQSGE
Trigger: TTCGCCAGATTGTACAGTCCATTTCTGACCTGAATG...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCTCACTTTCTTTCTCGTaGCCCGGCTGGCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: GKEESVDAKVRCPDALRFSLSFS*PGWPTL
Trigger: AAGGGTGGGCCAGCCGGGCCACGAGAAAGAAAGTGA...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGTCACTTTCTTTCTCGTaGCCCGGCTGGCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLSLSFS*PGWPTL
Trigger: AAGGGTGGGCCAGCCGGGCCACGAGAAAGAAAGTGA...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCCGGTTAAACGCCTGGTaGCCATGTCTCACCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALRLNAW*PCLTLC
Trigger: GCAAAGGGTGAGACATGGCCACCAGGCGTTTAACCG...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCACGTCGGTTAAACGCCTaGTGGCCATGTCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPRRLNA*WPCLTL
Trigger: AAGGGTGAGACATGGCCACCAGGCGTTTAACCGACG...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCCGTCGGTTAAACGCCTaGTGGCCATGTCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: VRGCKGSLPRRPQIPRGCRRLNA*WPCLTL
Trigger: AAGGGTGAGACATGGCCACCAGGCGTTTAACCGACG...GCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGAACAGCTGCCGGTTTTaGATGGAATTATTCCGCAAC +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRNSCRF*MELFRN
Trigger: GTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTT...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCCCATGGGGACACACTaGCTGAGTCTGGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RSPWMQRFAAPTPSDSSRPMGTH*LSLVAF
Trigger: GAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGG...CCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGGATTGAGCAAGGATaGCTGGGGATACCCATGGGG +
Preference number: 4 (lower is better)
Translates to: GVRGCKGSLPRRPQIPRGWIEQG*LGIPMG
Trigger: CCCCATGGGTATCCCCAGCCATCCTTGCTCAATCCA...GCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGAGGTGGCACCAACTTaGAAAGGGAAGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: MQRFAAPTPSDSSRLHLCEVAPT*KGKAGQ
Trigger: CTGCCCAGCCTTCCCTTTCCAAGTTGGTGCCACCTC...GCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGGGAACGTCTCAACCATaGGTTAAAATCAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: PDALRFLEAAPLRAAGGAGTSQP*VKIRWD
Trigger: ATCCCATCTGATTTTAACCCATGGTTGAGACGTTCC...CGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACAACAGAAAAATACAGTaGTTTGAGGACCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHNRKIQ*FEDPKK
Trigger: CTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTT...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGAGGTGCCCACAGACAATaGCTGCCAGCGAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRGAHRQ*LPASKG
Trigger: CCCTTTACTCGCTGGCAGCCATTGTCTGTGGGCACC...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGTGCCCACAGACAATaGCTGCCAGCGAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: MQRFAAPTPSDSSRLHLCGAHRQ*LPASKG
Trigger: CCCTTTACTCGCTGGCAGCCATTGTCTGTGGGCACC...GCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGGGTGCCCACAGACAATaGCTGCCAGCGAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: RSPWMQRFAAPTPSDSSRGAHRQ*LPASKG
Trigger: CCCTTTACTCGCTGGCAGCCATTGTCTGTGGGCACC...CCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCAGAGGAGACTGGCCTaGGTGATCGTTACCTCCACG +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCQRRLA*VIVTST
Trigger: CGTGGAGGTAACGATCACCCAGGCCAGTCTCCTCTG...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCAGAGGAGACTGGCCTaGGTGATCGTTACCTCCACG +
Preference number: 4 (lower is better)
Translates to: RSPWMQRFAAPTPSDSSRQRRLA*VIVTST
Trigger: CGTGGAGGTAACGATCACCCAGGCCAGTCTCCTCTG...CCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGCGGCCAACATCATACTaGATTTCATCCACTCCATCC +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLRPTSY*ISSTPS
Trigger: GGATGGAGTGGATGAAATTCAGTATGATGTTGGCCG...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACATTTAAATGCTTGTCATaGAGGCTGGCCAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTFKCLS*RLANSF
Trigger: GAAAGAATTGGCCAGCCTTCATGACAAGCATTTAAA...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp AGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGTCGCCCCTAAGTCCCTaGATATTTCATTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RFAAPTPSDSSRLHLCGQSPLSP*IFHSGQ
Trigger: CTGACCTGAATGAAATATTCAGGGACTTAGGGGCGA...CTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGTGGACACTAAGCCCATaGGCTGTTTGGACAACTTCA +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLWTLSP*AVWTTS
Trigger: TGAAGTTGTCCAAACAGCTCATGGGCTTAGTGTCCA...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AAAACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGAACCAGGTCCGCTTCCTaGAATGCCAGGGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: KTHSPDRLSRTREGGVRGTRSAS*NARAPL
Trigger: TAGAGGGGCCCTGGCATTTCAGGAAGCGGACCTGGT...TCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTCACATTGCAGGGCTaGCTGATGAGGTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RSPWMQRFAAPTPSDSSRLTLQG*LMRCWL
Trigger: AAGCCAGCACCTCATCAGTCAGCCCTGCAATGTGAG...CCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGACTCACATTGCAGGGCTaGCTGATGAGGTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRLTLQG*LMRCWL
Trigger: AAGCCAGCACCTCATCAGTCAGCCCTGCAATGTGAG...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCCTCACATTGCAGGGCTaGCTGATGAGGTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: THSPDRLSRTREGGVRGCLTLQG*LMRCWL
Trigger: AAGCCAGCACCTCATCAGTCAGCCCTGCAATGTGAG...GCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACTCACATTGCAGGGCTaGCTGATGAGGTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAALTLQG*LMRCWL
Trigger: AAGCCAGCACCTCATCAGTCAGCCCTGCAATGTGAG...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGAAAGAACACCTGCAGTaGCTCTCAACAGCTACGGAA +
Preference number: 4 (lower is better)
Translates to: RFAAPTPSDSSRLHLCGQKEHLQ*LSTATE
Trigger: TTCCGTAGCTGTTGAGAGTCACTGCAGGTGTTCTTT...CTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAAAAATACAGTGGTTTaGGGACCCCAAGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHEKNTVV*GPQEVS
Trigger: GCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTT...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCTACCTCCACTCAACCTaGGCTGCACCCGGACACTTT +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCYLHST*AAPGHF
Trigger: AAAGTGTCCGGGTGCAGCTCAGGTTGAGTGGAGGTA...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGGCTAGGATAAAACACTaGAAGCACTTGTGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: PDALRFLEAAPLRAAGGAARIKH*KHLCQN
Trigger: GTTTTGACACAAGTGCTTTCAGTGTTTTATCCTAGC...CGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: SPWMQRFAAPTPSDSSRLAEGWR*CDYSLA
Trigger: AGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGC...CAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR TCA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLAEGWR*CDYSLA
Trigger: AGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGC...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCAAATTCTTTCATCTTCTaGTTAATCCGGCCAACATCA +
Preference number: 4 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAANSFIF*LIRPTS
Trigger: TGATGTTGGCCGGATTAAGCAGAAGATGAAAGAATT...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACATGTTCCTCTTCGCTaGTGTCATCCAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAAHVPLR*CHPGWV
Trigger: GACCCACCCTGGATGACAGCAGCGAAGAGGAACATG...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp AGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCATGTTCCTCTTCGCTaGTGTCATCCAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SPWMQRFAAPTPSDSSRLHVPLR*CHPGWV
Trigger: GACCCACCCTGGATGACAGCAGCGAAGAGGAACATG...CAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp TTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCTGGTGGAGAGTTCCTaGAGGGCCTGCGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: FLVKMPPVLGNVPASWALLVESS*RACASE
Trigger: CTCGCTGGCGCAGGCCCTGCAGGAACTCTCCACCAG...CAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACAACTCAATCTCTATTGTaGAGCAGTATCAAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTTQSLL*SSIKGP
Trigger: AGGACCTTTGATACTGCTGCACAATAGAGATTGAGT...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCCTTGGCAATGTGCCTaGTTCCTGGGCATTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RSPWMQRFAAPTPSDSSRPWQCA*FLGIAQ
Trigger: CTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGG...CCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCATGGAAAAACATGAGGTaGCCACAGACAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPWKNMR*PQTMAA
Trigger: GGCAGCCATTGTCTGTGGGCACCTCATGTTTTTCCA...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCGGTCATCAGCAAGTTaGTCGGCTAACAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: PDRLSRTREGGVRGCKGSRSSAS*SANSCR
Trigger: CCGGCAGCTGTTAGCCGAGCAACTTGCTGATGACCG...CGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371132.8
CDS-3UTR CCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGTCCACCAGAACTAACTaGTCCTCTGTAAAACCCCGA +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLSTRTN*SSVKPR
Trigger: TCGGGGTTTTACAGAGGACCAGTTAGTTCTGGTGGA...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AAAACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGAGGCCTAGGCCCTCTTTaGACAACCGGAGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: KTHSPDRLSRTREGGVRGGLGPL*TTGARL
Trigger: AAGCCTGGCTCCGGTTGTCCAAAGAGGGCCTAGGCC...TCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CCA 90 bp TGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCCGGTTAAACGCCTGGTaGCCATGTCTCACCCTTTGC +
Preference number: 4 (lower is better)
Translates to: WMQRFAAPTPSDSSRLHLRLNAW*PCLTLC
Trigger: GCAAAGGGTGAGACATGGCCACCAGGCGTTTAACCG...GAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCGTCGGTTAAACGCCTaGTGGCCATGTCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: GKEESVDAKVRCPDALRFRRLNA*WPCLTL
Trigger: AAGGGTGAGACATGGCCACCAGGCGTTTAACCGACG...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCGTCGGTTAAACGCCTaGTGGCCATGTCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCRRLNA*WPCLTL
Trigger: AAGGGTGAGACATGGCCACCAGGCGTTTAACCGACG...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCCCATGGGGACACACTaGCTGAGTCTGGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PDRLSRTREGGVRGCKGSPMGTH*LSLVAF
Trigger: GAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGG...CGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGTTGAGCAAGGATGGCTaGGGATACCCATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: RSPWMQRFAAPTPSDSSRLSKDG*GYPWGH
Trigger: GTGTCCCCATGGGTATCCCCAGCCATCCTTGCTCAA...CCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTTGGATTGAGCAAGGATaGCTGGGGATACCCATGGGG +
Preference number: 4 (lower is better)
Translates to: RTREGGVRGCKGSLPRRPWIEQG*LGIPMG
Trigger: CCCCATGGGTATCCCCAGCCATCCTTGCTCAATCCA...AGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CAGCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGTCCACTAATCCTAAATaGGGTGACCCATTTAAAATG +
Preference number: 4 (lower is better)
Translates to: QLAGRRPSPSHPGDPHARSTNPK*GDPFKM
Trigger: CATTTTAAATGGGTCACCCCATTTAGGATTAGTGGA...CCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCGATGAAGTCCTACTTTaGCGGTCTGACCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALDEVLL*RSDPRS
Trigger: TGAGCGTGGGTCAGACCGCCAAAGTAGGACTTCATC...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCTTGGAAAGGGAAGGCTaGGCAGGGGTTTGGACACTA +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALLEREG*AGVWTL
Trigger: TAGTGTCCAAACCCCTGCCCAGCCTTCCCTTTCCAA...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCACCAATGGCTACCTaGAGGTGGCACCAACTTGGA +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAAPPMAT*RWHQLG
Trigger: TCCAAGTTGGTGCCACCTCCAGGTAGCCATTGGTGG...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACTTTCAGTTACAATCTTaGGAAAGATCAGGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHFQLQS*ERSGAL
Trigger: CAAAGCTCCTGATCTTTCCCAAGATTGTAACTGAAA...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCATTTCAGTTACAATCTTaGGAAAGATCAGGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAAFQLQS*ERSGAL
Trigger: CAAAGCTCCTGATCTTTCCCAAGATTGTAACTGAAA...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCATCACTTCACAAGCATaGCCCAGCCAGCACCACCAC +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCITSQA*PSQHHH
Trigger: GTGGTGGTGCTGGCTGGGCCATGCTTGTGAAGTGAT...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCCTTCTGGATCTAAGCTaGTGCCTGACACCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: MQRFAAPTPSDSSRLHLCLLDLS*CLTPVP
Trigger: TGGCACTGGTGTCAGGCATCAGCTTAGATCCAGAAG...GCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGATTTAAATGCTTGTCATaGAGGCTGGCCAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: GRRPSPSHPGDPHARHTRFKCLS*RLANSF
Trigger: GAAAGAATTGGCCAGCCTTCATGACAAGCATTTAAA...TCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCCACCTGTGGAAGAGCTaGGTGATCTCTTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALHLWKS*VISWVV
Trigger: AACTACCCAAGAGATCACTCAGCTCTTCCACAGGTG...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCTGGACACTAAGCCCATaGGCTGTTTGGACAACTTCA +
Preference number: 4 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPWTLSP*AVWTTS
Trigger: TGAAGTTGTCCAAACAGCTCATGGGCTTAGTGTCCA...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAAAAGAACACCTGCAGTaGCTCTCAACAGCTACGGAA +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPKEHLQ*LSTATE
Trigger: TTCCGTAGCTGTTGAGAGTCACTGCAGGTGTTCTTT...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCGAGTGTGGAAAAACATaGGGTGCCCACAGACAATGG +
Preference number: 4 (lower is better)
Translates to: VRGCKGSLPRRPQIPRGCECGKT*GAHRQW
Trigger: CCATTGTCTGTGGGCACCTCATGTTTTTCCACACTC...GCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCAGAGTGTGGAAAAACATaGGGTGCCCACAGACAATGG +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPECGKT*GAHRQW
Trigger: CCATTGTCTGTGGGCACCTCATGTTTTTCCACACTC...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGGCTAGGATAAAACACTaGAAGCACTTGTGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRARIKH*KHLCQN
Trigger: GTTTTGACACAAGTGCTTTCAGTGTTTTATCCTAGC...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTAACTGGTAGCAGGCTGCCGGCCTaGAGGAAGACAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LVPALPPSVCSAPPELTGSRLPA*RKTAGP
Trigger: AGGCCCTGCTGTCTTCCTGCAGGCCGGCAGCCTGCT...ACCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476384.5
ENST00000483434.5
CDS-3UTR GCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACTTTTGATACTGTTCTaGCTTGTGAAGCTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTLLILF*LVKLFQ
Trigger: TTGAAACAGCTTCACAAGGCAGAACAGTATCAAAAG...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAACTCAATCTCTATTGTaGAGCAGTATCAAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GRRPSPSHPGDPHARHTRTQSLL*SSIKGP
Trigger: AGGACCTTTGATACTGCTGCACAATAGAGATTGAGT...TCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CAGCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGATGAAGGGGCATTTTTaGCTCTACTCATCAATTTTT +
Preference number: 4 (lower is better)
Translates to: QLAGRRPSPSHPGDPHARMKGHF*LYSSIF
Trigger: AAAAATTGATGAGTAGAGGCAAAAATGCCCCTTCAT...CCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCAATGAAGGGGCATTTTTaGCTCTACTCATCAATTTTT +
Preference number: 4 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAAMKGHF*LYSSIF
Trigger: AAAAATTGATGAGTAGAGGCAAAAATGCCCCTTCAT...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCTGCTTCCTGGGCATTaGTCAGTGGCAATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCLLPGH*SVAMEE
Trigger: CTCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAG...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCTGCTTCCTGGGCATTaGTCAGTGGCAATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SPWMQRFAAPTPSDSSRLLLPGH*SVAMEE
Trigger: CTCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAG...CAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCTCAGTGTCCGCTTCCTGAAATaGCAGGGCCCCTCTAGGACC +
Preference number: 4 (lower is better)
Translates to: VKMPPVLGNVPASWALLSVRFLK*QGPSRT
Trigger: GGTCCTAGAGGGGCCCTGGCATTTCAGGAAGCGGAC...ACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTACAGAAGTCCGGTATTaGCACTGTGGACTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: VRCPDALRFLEAAPLRAATEVRY*HCGLFL
Trigger: CAAAAACAGTCCACAGTGGCAATACCGGACTTCTGT...AGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCTTCAAGCTATTCTCCTaGCTCAGCCTCTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPFKLFS*LSLLSS
Trigger: GCTACTCAAGAGGCTGAGGCAGGAGAATAGCTTGAA...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGACCCACAGACAATGGCTaGCAGCGAGTAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRPTDNG*QRVKGK
Trigger: CTTTCCCTTTACTCGCTGGCAGCCATTGTCTGTGGG...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCCCACAGACAATGGCTaGCAGCGAGTAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SPWMQRFAAPTPSDSSRLPTDNG*QRVKGK
Trigger: CTTTCCCTTTACTCGCTGGCAGCCATTGTCTGTGGG...CAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp ATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGCAATGCTACGTGAATaGAGAGGGCTGGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: MQRFAAPTPSDSSRLHLCAMLRE*RGLEVM
Trigger: CATCACCTCCAGCCCTCTGCATTCACGTAGCATTGC...GCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp ACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCGCAATGCTACGTGAATaGAGAGGGCTGGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: THSPDRLSRTREGGVRGCAMLRE*RGLEVM
Trigger: CATCACCTCCAGCCCTCTGCATTCACGTAGCATTGC...GCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp ACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCCAAGCTACGCAGCAATaGTACGTGAATGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: THSPDRLSRTREGGVRGCQATQQ*YVNAEG
Trigger: GCCCTCTGCATTCACGTAGCATTGCTGCGTAGCTTG...GCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361830.7
CDS-3UTR CCA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCTCCACCAGAACTAACTaGTCCTCTGTAAAACCCCGA +
Preference number: 4 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPSTRTN*SSVKPR
Trigger: TCGGGGTTTTACAGAGGACCAGTTAGTTCTGGTGGA...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGCTGCCGGTTTTGGATaGAATTATTCCGCAACAACA +
Preference number: 4 (lower is better)
Translates to: VRCPDALRFLEAAPLRAAAAGFG*NYSATT
Trigger: TGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGC...AGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGTCCACTAATCCTAAATaGGGTGACCCATTTAAAATG +
Preference number: 4 (lower is better)
Translates to: PDALRFLEAAPLRAAGGASTNPK*GDPFKM
Trigger: CATTTTAAATGGGTCACCCCATTTAGGATTAGTGGA...CGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCAATGTGCCTGCTTCCTaGGCATTGCTCAGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: VRGCKGSLPRRPQIPRGCNVPAS*ALLSGN
Trigger: ATTGCCACTGAGCAATGCCCAGGAAGCAGGCACATT...GCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGGATGAAGTCCTACTTTaGCGGTCTGACCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLDEVLL*RSDPRS
Trigger: TGAGCGTGGGTCAGACCGCCAAAGTAGGACTTCATC...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCTTGGAAAGGGAAGGCTaGGCAGGGGTTTGGACACTA +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCLEREG*AGVWTL
Trigger: TAGTGTCCAAACCCCTGCCCAGCCTTCCCTTTCCAA...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCAGCAAGTTCCCTAATGTaGACAGCCCCACACCTAAGA +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPASSLM*TAPHLR
Trigger: TCTTAGGTGTGGGGCTGTCCACATTAGGGAACTTGC...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGGCCTCTCAAAGTCTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: WMQRFAAPTPSDSSRLHLWPLKV*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAGACTTTGAGAGGCCA...GAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACGGCCCAGTAGAGTGTaGAAAAACATGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAARPSRV*KNMRCP
Trigger: TGGGCACCTCATGTTTTTCCACACTCTACTGGGCCG...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGACGGCCCAGTAGAGTGTaGAAAAACATGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRRPSRV*KNMRCP
Trigger: TGGGCACCTCATGTTTTTCCACACTCTACTGGGCCG...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGAAAGATCAGGAGCTTTaGAAAACGCGTGGTAAACAT +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRKDQEL*KTRGKH
Trigger: ATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTT...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCCGGCCAACATCATACTaGATTTCATCCACTCCATCC +
Preference number: 4 (lower is better)
Translates to: GVRGCKGSLPRRPQIPRGRPTSY*ISSTPS
Trigger: GGATGGAGTGGATGAAATTCAGTATGATGTTGGCCG...GCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCACCTGTGGAAGAGCTaGGTGATCTCTTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLHLWKS*VISWVV
Trigger: AACTACCCAAGAGATCACTCAGCTCTTCCACAGGTG...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp ACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGCACCTGTGGAAGAGCTaGGTGATCTCTTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: TREGGVRGCKGSLPRRPQHLWKS*VISWVV
Trigger: AACTACCCAAGAGATCACTCAGCTCTTCCACAGGTG...CTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCGATTCTTCATGCGTTTaGGGTAGCCTGACTGTGCGT +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCDSSCV*GSLTVR
Trigger: ACGCACAGTCAGGCTACCTCAAACGCATGAAGAATC...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp AGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGGATTCTTCATGCGTTTaGGGTAGCCTGACTGTGCGT +
Preference number: 4 (lower is better)
Translates to: SPWMQRFAAPTPSDSSRLDSSCV*GSLTVR
Trigger: ACGCACAGTCAGGCTACCTCAAACGCATGAAGAATC...CAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGAGATTCTTCATGCGTTTaGGGTAGCCTGACTGTGCGT +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRDSSCV*GSLTVR
Trigger: ACGCACAGTCAGGCTACCTCAAACGCATGAAGAATC...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp GTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCTCAGTGGCTTTCCAATTGTCTaGCTCCCCCTACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VKMPPVLGNVPASWALLSGFPIV*LPLPRA
Trigger: TGCCCTGGGTAGGGGGAGTCAGACAATTGGAAAGCC...ACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCATCTTCAGTTTTaGTACAGGACTGTTCAACGT +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHENHLQF*YRTVQR
Trigger: ACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTT...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGTACTGTTCTGCCTTGTaGAGCTGTTTCAAACCATCT +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLYCSAL*SCFKPS
Trigger: AGATGGTTTGAAACAGCTTCACAAGGCAGAACAGTA...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACATTCCCCGGACCGCTTaGGCAGGACTAGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNIPRTA*AGLGKE
Trigger: CTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAAT...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCACACTTTGTTACTCTaGTCATTAACAGTGATGGAA +
Preference number: 4 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRHTLLL*SLTVME
Trigger: TTCCATCACTGTTAATGATCAGAGTAACAAAGTGTG...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACACCAGGTCCGCTTCCTaGAATGCCAGGGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNTRSAS*NARAPL
Trigger: TAGAGGGGCCCTGGCATTTCAGGAAGCGGACCTGGT...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACAAACGAGGAGCTTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCACCAGGTCCGCTTCCTaGAATGCCAGGGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: TNEELPSQDAPSPWQCACTRSAS*NARAPL
Trigger: TAGAGGGGCCCTGGCATTTCAGGAAGCGGACCTGGT...GCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAAGCTCCTCGTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AAAACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGACTCACATTGCAGGGCTaGCTGATGAGGTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: KTHSPDRLSRTREGGVRGLTLQG*LMRCWL
Trigger: AAGCCAGCACCTCATCAGTCAGCCCTGCAATGTGAG...TCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAAAGAACACCTGCAGTaGCTCTCAACAGCTACGGAA +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALKEHLQ*LSTATE
Trigger: TTCCGTAGCTGTTGAGAGTCACTGCAGGTGTTCTTT...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCAAAGAACACCTGCAGTaGCTCTCAACAGCTACGGAA +
Preference number: 4 (lower is better)
Translates to: GVRGCKGSLPRRPQIPRGKEHLQ*LSTATE
Trigger: TTCCGTAGCTGTTGAGAGTCACTGCAGGTGTTCTTT...GCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCAAAAGAACACCTGCAGTaGCTCTCAACAGCTACGGAA +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPKEHLQ*LSTATE
Trigger: TTCCGTAGCTGTTGAGAGTCACTGCAGGTGTTCTTT...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCATTCCTCAAATGCTACTaGTCTCTCCCCAAGTACAGG +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPFLKCY*SLPKYR
Trigger: CCTGTACTTGGGGAGAGATCAGTAGCATTTGAGGAA...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTAACTGGTCCTCTGTACCACTGCCAGCAGGCTaGCGGCCTGCAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: RSSTISVFCSTRTNWSSVPLPAG*RPAGRQ
Trigger: CTGTCTTCCTGCAGGCCGGCAGCCTGCTGGCAGTGG...TACAGAGGACCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476384.5
ENST00000483434.5
CDS-3UTR GCA 90 bp ATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTAACCCACTGCCAGCAGGCTaGCGGCCTGCAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: ISRSRSSTISVFCSTRTNPLPAG*RPAGRQ
Trigger: CTGTCTTCCTGCAGGCCGGCAGCCTGCTGGCAGTGG...GTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476384.5
ENST00000483434.5
CDS-3UTR GCA 90 bp TACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCTGGTGGAGAGTTCCTaGAGGGCCTGCGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: YNLANLSFPLFHHQCVLLLVESS*RACASE
Trigger: CTCGCTGGCGCAGGCCCTGCAGGAACTCTCCACCAG...GAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464640.5
CDS-3UTR GCA 90 bp TGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCAAAAAGATGCAGCTGTaGGCTTCGCCAAGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: WMQRFAAPTPSDSSRLHLKKMQL*ASPRRR
Trigger: TCTACGCCTTGGCGAAGCGCACAGCTGCATCTTTTT...GAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCACACACGAAAACCCAATaGCACTTATCGAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPHTKTQ*HLSRLH
Trigger: GTGAAGTCTCGATAAGTGGCATTGGGTTTTCGTGTG...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCATTATGTTAACATTCTaGTCAGACATGGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGIMLTF*SDMAAK
Trigger: TTTAGCAGCCATGTCTGAGCAGAATGTTAACATAAT...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGATTATGTTAACATTCTaGTCAGACATGGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: PDALRFLEAAPLRAAGGAIMLTF*SDMAAK
Trigger: TTTAGCAGCCATGTCTGAGCAGAATGTTAACATAAT...CGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACAATTATGTTAACATTCTaGTCAGACATGGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTIMLTF*SDMAAK
Trigger: TTTAGCAGCCATGTCTGAGCAGAATGTTAACATAAT...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAACAGAAGTCCGGTATTaGCACTGTGGACTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPTEVRY*HCGLFL
Trigger: CAAAAACAGTCCACAGTGGCAATACCGGACTTCTGT...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCATTCAAGCTATTCTCCTaGCTCAGCCTCTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPFKLFS*LSLLSS
Trigger: GCTACTCAAGAGGCTGAGGCAGGAGAATAGCTTGAA...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCCCACAGACAATGGCTaGCAGCGAGTAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PDRLSRTREGGVRGCKGSPTDNG*QRVKGK
Trigger: CTTTCCCTTTACTCGCTGGCAGCCATTGTCTGTGGG...CGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp ACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGTGGAAAAACATGAGGTaGCCACAGACAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TREGGVRGCKGSLPRRPQWKNMR*PQTMAA
Trigger: GGCAGCCATTGTCTGTGGGCACCTCATGTTTTTCCA...CTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACGACCCCTTCCTTTCCTaGACGGCCTGGTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNDPFLS*TAWSST
Trigger: AGTGGAGGACCAGGCCGTCCAGGAAAGGAAGGGGTC...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR CCA 90 bp GTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGCTTGTCATGAAGGCTaGCCAATTCTTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: VRCPDALRFLEAAPLRAAACHEG*PILSSS
Trigger: AGAAGATGAAAGAATTGGCCAGCCTTCATGACAAGC...AGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp AGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGGCTTGTCATGAAGGCTaGCCAATTCTTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: RFAAPTPSDSSRLHLCGQACHEG*PILSSS
Trigger: AGAAGATGAAAGAATTGGCCAGCCTTCATGACAAGC...CTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp ACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCCGTGCCGGAAGCTGGTaGAGAGTTCCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TIWRISRSRSSTISVFCSRAGSW*RVPAGP
Trigger: AGGCCCTGCAGGAACTCTCCACCAGCTTCCGGCACG...GGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464640.5
CDS-3UTR CCA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLMDCTI*RISRSR
Trigger: GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCAT...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: GKEESVDAKVRCPDALRFMDCTI*RISRSR
Trigger: GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCAT...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCMDCTI*RISRSR
Trigger: GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCAT...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000483434.5
CDS-3UTR CCA 90 bp GTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCTCAGTCCCATGGGGACACACTaGCTGAGTCTGGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VKMPPVLGNVPASWALLSPMGTH*LSLVAF
Trigger: GAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGG...ACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGAATGTGCCTGCTTCCTaGGCATTGCTCAGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: SPWMQRFAAPTPSDSSRLNVPAS*ALLSGN
Trigger: ATTGCCACTGAGCAATGCCCAGGAAGCAGGCACATT...CAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGAATGTGCCTGCTTCCTaGGCATTGCTCAGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: TREGGVRGCKGSLPRRPQNVPAS*ALLSGN
Trigger: ATTGCCACTGAGCAATGCCCAGGAAGCAGGCACATT...CTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAAATGTGCCTGCTTCCTaGGCATTGCTCAGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRNVPAS*ALLSGN
Trigger: ATTGCCACTGAGCAATGCCCAGGAAGCAGGCACATT...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGAATGTGCCTGCTTCCTaGGCATTGCTCAGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: RSPWMQRFAAPTPSDSSRNVPAS*ALLSGN
Trigger: ATTGCCACTGAGCAATGCCCAGGAAGCAGGCACATT...CCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCAGCAAGTTCCCTAATGTaGACAGCCCCACACCTAAGA +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAAASSLM*TAPHLR
Trigger: TCTTAGGTGTGGGGCTGTCCACATTAGGGAACTTGC...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCGCAAGTTCCCTAATGTaGACAGCCCCACACCTAAGA +
Preference number: 4 (lower is better)
Translates to: WMQRFAAPTPSDSSRLHLASSLM*TAPHLR
Trigger: TCTTAGGTGTGGGGCTGTCCACATTAGGGAACTTGC...GAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAAAGATCAGGAGCTTTaGAAAACGCGTGGTAAACAT +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHEKDQEL*KTRGKH
Trigger: ATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTT...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGTTTAAATGCTTGTCATaGAGGCTGGCCAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLFKCLS*RLANSF
Trigger: GAAAGAATTGGCCAGCCTTCATGACAAGCATTTAAA...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp ATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCTCGCCCCTAAGTCCCTaGATATTTCATTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: MQRFAAPTPSDSSRLHLCSPLSP*IFHSGQ
Trigger: CTGACCTGAATGAAATATTCAGGGACTTAGGGGCGA...GCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGAACCATCTTCAGTTTTaGTACAGGACTGTTCAACGT +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLNHLQF*YRTVQR
Trigger: ACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTT...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp TTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCCTACTTTGGCGGTCTaGCCCACGCTCACACAAACG +
Preference number: 4 (lower is better)
Translates to: FLVKMPPVLGNVPASWALPTLAV*PTLTQT
Trigger: CGTTTGTGTGAGCGTGGGTCAGACCGCCAAAGTAGG...CAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGTGGACACTAAGCCCATaGGCTGTTTGGACAACTTCA +
Preference number: 4 (lower is better)
Translates to: TREGGVRGCKGSLPRRPQWTLSP*AVWTTS
Trigger: TGAAGTTGTCCAAACAGCTCATGGGCTTAGTGTCCA...CTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGAAAAGAACACCTGCAGTaGCTCTCAACAGCTACGGAA +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRKEHLQ*LSTATE
Trigger: TTCCGTAGCTGTTGAGAGTCACTGCAGGTGTTCTTT...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCACTGTGGACTGTTTTTaGGGCAAGTTCCCTAATGTG +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALTVDCF*GKFPNV
Trigger: CACATTAGGGAACTTGCCTCAAAAACAGTCCACAGT...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGTTCCTCAAATGCTACTaGTCTCTCCCCAAGTACAGG +
Preference number: 4 (lower is better)
Translates to: RSPWMQRFAAPTPSDSSRFLKCY*SLPKYR
Trigger: CCTGTACTTGGGGAGAGATCAGTAGCATTTGAGGAA...CCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCTTCCTCAAATGCTACTaGTCTCTCCCCAAGTACAGG +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCFLKCY*SLPKYR
Trigger: CCTGTACTTGGGGAGAGATCAGTAGCATTTGAGGAA...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAAGGGAAAGAAACCCTaGGGTACCATGATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPKGKKP*GTMILF
Trigger: GAAAAGAATCATGGTACCTCAGGGTTTCTTTCCCTT...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAAAGGGAAAGAAACCCTaGGGTACCATGATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPKGKKP*GTMILF
Trigger: GAAAAGAATCATGGTACCTCAGGGTTTCTTTCCCTT...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGCTAGGATAAAACACTaGAAGCACTTGTGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: VRCPDALRFLEAAPLRAAARIKH*KHLCQN
Trigger: GTTTTGACACAAGTGCTTTCAGTGTTTTATCCTAGC...AGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAATTCTTTCATCTTCTaGTTAATCCGGCCAACATCA +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHENSFIF*LIRPTS
Trigger: TGATGTTGGCCGGATTAAGCAGAAGATGAAAGAATT...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp CTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGCATGTTCCTCTTCGCTaGTGTCATCCAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LANLSFPLFHHQCVLLHQHVPLR*CHPGWV
Trigger: GACCCACCCTGGATGACAGCAGCGAAGAGGAACATG...CTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR GCA 90 bp AGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTACCATCAGTGTGTTCTaGTCCACCAGAACTAACTGG +
Preference number: 4 (lower is better)
Translates to: RTREGGVRGCKGSLPRRPTISVF*STRTNW
Trigger: CCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGT...AGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCACAGAAGTCCGGTATTaGCACTGTGGACTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALTEVRY*HCGLFL
Trigger: CAAAAACAGTCCACAGTGGCAATACCGGACTTCTGT...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCAACAGAAGTCCGGTATTaGCACTGTGGACTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPTEVRY*HCGLFL
Trigger: CAAAAACAGTCCACAGTGGCAATACCGGACTTCTGT...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGTTCAAGCTATTCTCCTaGCTCAGCCTCTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SPWMQRFAAPTPSDSSRLFKLFS*LSLLSS
Trigger: GCTACTCAAGAGGCTGAGGCAGGAGAATAGCTTGAA...CAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTTTCAAGCTATTCTCCTaGCTCAGCCTCTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RTREGGVRGCKGSLPRRPFKLFS*LSLLSS
Trigger: GCTACTCAAGAGGCTGAGGCAGGAGAATAGCTTGAA...AGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCACCCACTTAGGAGGTaGCCGTTTTGTCACACCAAT +
Preference number: 4 (lower is better)
Translates to: PDRLSRTREGGVRGCKGSHPLRR*PFCHTN
Trigger: ATTGGTGTGACAAAACGGCCACCTCCTAAGTGGGTG...CGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAGCTTGTCATGAAGGCTaGCCAATTCTTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPACHEG*PILSSS
Trigger: AGAAGATGAAAGAATTGGCCAGCCTTCATGACAAGC...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGTCCACCAGAACTAACTaGTCCTCTGTAAAACCCCGA +
Preference number: 4 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLSTRTN*SSVKPR
Trigger: TCGGGGTTTTACAGAGGACCAGTTAGTTCTGGTGGA...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGTCCACCAGAACTAACTaGTCCTCTGTAAAACCCCGA +
Preference number: 4 (lower is better)
Translates to: SPWMQRFAAPTPSDSSRLSTRTN*SSVKPR
Trigger: TCGGGGTTTTACAGAGGACCAGTTAGTTCTGGTGGA...CAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGTGATCTCTTGGGTAGTTATCTCAATGGCATGTTCCTCTTCGCTGCTGTCATCGCCAGGCTTGGGGCCTaGACTCGAGGGCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SDLLGSYLNGMFLFAAVIARLGA*TRGRLQ
Trigger: CTGCAGGCGCCCTCGAGTCCAGGCCCCAAGCCTGGC...GATGACAGCAGCGAAGAGGAACATGCCATTGAGATAACTACCCAAGAGATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR CCA 90 bp GGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCACCCCAATCCAACCTTaGATCTACAAGCGTCTAACT +
Preference number: 4 (lower is better)
Translates to: GVRGCKGSLPRRPQIPRGTPIQP*IYKRLT
Trigger: AGTTAGACGCTTGTAGATCCAAGGTTGGATTGGGGT...GCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGTCACTTTCTTTCTCGTaGCCCGGCTGGCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: FLVKMPPVLGNVPASWALSLSFS*PGWPTL
Trigger: AAGGGTGGGCCAGCCGGGCCACGAGAAAGAAAGTGA...CAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCAGCTGCCGGTTTTGGATaGAATTATTCCGCAACAACA +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPAAGFG*NYSATT
Trigger: TGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGC...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCAACAGCTGCCGGTTTTaGATGGAATTATTCCGCAAC +
Preference number: 4 (lower is better)
Translates to: GVRGCKGSLPRRPQIPRGNSCRF*MELFRN
Trigger: GTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTT...GCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACCCCATGGGGACACACTaGCTGAGTCTGGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNPMGTH*LSLVAF
Trigger: GAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGG...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGAGCAGCAGATCTAACTTaGAACGTCTCAACCATGGGT +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRAADLT*NVSTMG
Trigger: ACCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGC...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGGCAGCAGATCTAACTTaGAACGTCTCAACCATGGGT +
Preference number: 4 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLAADLT*NVSTMG
Trigger: ACCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGC...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCCGGTATTGCCACTGTaGACTGTTTTTGAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCPVLPL*TVFEAS
Trigger: ACTTGCCTCAAAAACAGTCCACAGTGGCAATACCGG...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGACCGGTATTGCCACTGTaGACTGTTTTTGAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRPVLPL*TVFEAS
Trigger: ACTTGCCTCAAAAACAGTCCACAGTGGCAATACCGG...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AAAACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGGCCTCTCAAAGTCTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: KTHSPDRLSRTREGGVRGWPLKV*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAGACTTTGAGAGGCCA...TCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCAGAGGAGACTGGCCTaGGTGATCGTTACCTCCACG +
Preference number: 4 (lower is better)
Translates to: FLVKMPPVLGNVPASWALQRRLA*VIVTST
Trigger: CGTGGAGGTAACGATCACCCAGGCCAGTCTCCTCTG...CAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCACTGTGGACTGTTTTTaGGGCAAGTTCCCTAATGTG +
Preference number: 4 (lower is better)
Translates to: MQRFAAPTPSDSSRLHLCTVDCF*GKFPNV
Trigger: CACATTAGGGAACTTGCCTCAAAAACAGTCCACAGT...GCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTTTTACCCAAATGGGTTaGGGGAACAAAAACCAACCC +
Preference number: 4 (lower is better)
Translates to: RTREGGVRGCKGSLPRRPFTQMG*GNKNQP
Trigger: GGGTTGGTTTTTGTTCCCTCAACCCATTTGGGTAAA...AGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGATTTACCCAAATGGGTTaGGGGAACAAAAACCAACCC +
Preference number: 4 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRFTQMG*GNKNQP
Trigger: GGGTTGGTTTTTGTTCCCTCAACCCATTTGGGTAAA...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCTTTACCCAAATGGGTTaGGGGAACAAAAACCAACCC +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCFTQMG*GNKNQP
Trigger: GGGTTGGTTTTTGTTCCCTCAACCCATTTGGGTAAA...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCTTTACCCAAATGGGTTaGGGGAACAAAAACCAACCC +
Preference number: 4 (lower is better)
Translates to: THSPDRLSRTREGGVRGCFTQMG*GNKNQP
Trigger: GGGTTGGTTTTTGTTCCCTCAACCCATTTGGGTAAA...GCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCAAAAATACAGTGGTTTaGGGACCCCAAGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCKNTVV*GPQEVS
Trigger: GCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTT...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAAATACAGTGGTTTaGGGACCCCAAGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: THSPDRLSRTREGGVRGCKNTVV*GPQEVS
Trigger: GCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTT...GCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGAAAAAATACAGTGGTTTaGGGACCCCAAGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRKNTVV*GPQEVS
Trigger: GCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTT...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: WRISRSRSSTISVFCSTRAEGWR*CDYSLA
Trigger: AGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGC...TCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493301.5
CDS-3UTR TCA 90 bp ACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCCGCAGCAATGCTACGTaGATGCAGAGGGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TIWRISRSRSSTISVFCSRSNAT*MQRAGG
Trigger: ACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCG...GGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493301.5
CDS-3UTR GCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAAGAAGACAGCAGGGCCTaGCTCCCCGGCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKEDSRA*LPGLLT
Trigger: AGTGAGAAGGCCGGGGAGGCAGGCCCTGCTGTCTTC...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp GATCTCTTGGGTAGTTATCTCAATGGCATGTTCCTCTTCGCTGCTGTCATCCAGCCACTGCCAGCAGGCTaGCGGCCTGCAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: DLLGSYLNGMFLFAAVIQPLPAG*RPAGRQ
Trigger: CTGTCTTCCTGCAGGCCGGCAGCCTGCTGGCAGTGG...CTGGATGACAGCAGCGAAGAGGAACATGCCATTGAGATAACTACCCAAGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR GCA 90 bp GTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTAATTCTTTCATCTTCTaGTTAATCCGGCCAACATCA +
Preference number: 4 (lower is better)
Translates to: VRCPDALRFLEAAPLRAANSFIF*LIRPTS
Trigger: TGATGTTGGCCGGATTAAGCAGAAGATGAAAGAATT...AGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp TTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCATGTTCCTCTTCGCTaGTGTCATCCAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: FLVKMPPVLGNVPASWALHVPLR*CHPGWV
Trigger: GACCCACCCTGGATGACAGCAGCGAAGAGGAACATG...CAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GATCTCTTGGGTAGTTATCTCAATGGCATGTTCCTCTTCGCTGCTGTCATCCAGGGACTCGAGGGCGCCTaGAGCTCCCTTCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: DLLGSYLNGMFLFAAVIQGLEGA*SSLLGT
Trigger: AGTCCCCAGAAGGGAGCTGCAGGCGCCCTCGAGTCC...CTGGATGACAGCAGCGAAGAGGAACATGCCATTGAGATAACTACCCAAGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR GCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGACACACGAAAACCCAATaGCACTTATCGAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRHTKTQ*HLSRLH
Trigger: GTGAAGTCTCGATAAGTGGCATTGGGTTTTCGTGTG...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp TGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCCACACGAAAACCCAATaGCACTTATCGAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: WMQRFAAPTPSDSSRLHLHTKTQ*HLSRLH
Trigger: GTGAAGTCTCGATAAGTGGCATTGGGTTTTCGTGTG...GAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCACACGAAAACCCAATaGCACTTATCGAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCHTKTQ*HLSRLH
Trigger: GTGAAGTCTCGATAAGTGGCATTGGGTTTTCGTGTG...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
ENST00000483434.5
CDS-3UTR GCA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCACTCAATCTCTATTGTaGAGCAGTATCAAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPTQSLL*SSIKGP
Trigger: AGGACCTTTGATACTGCTGCACAATAGAGATTGAGT...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp TTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCCTTGGCAATGTGCCTaGTTCCTGGGCATTGCTCAG +
Preference number: 4 (lower is better)
Translates to: FLVKMPPVLGNVPASWALPWQCA*FLGIAQ
Trigger: CTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGG...CAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGTGCTGTCATCCAGGGTaGGTCTGTTTAAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: TREGGVRGCKGSLPRRPQCCHPG*VCLNAC
Trigger: ACAAGCATTTAAACAGACCCACCCTGGATGACAGCA...CTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp CCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGTCCACCAGAACTAACTaGTCCTCTGTAAAACCCCGA +
Preference number: 4 (lower is better)
Translates to: PDRLSRTREGGVRGCKGSSTRTN*SSVKPR
Trigger: TCGGGGTTTTACAGAGGACCAGTTAGTTCTGGTGGA...CGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCCATTCAGGTCAGAAATaGACTGTACAATCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: GVRGCKGSLPRRPQIPRGHSGQK*TVQSGE
Trigger: TTCGCCAGATTGTACAGTCCATTTCTGACCTGAATG...GCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGTGATCTCTTGGGTAGTTATCTCAATGGCATGTTCCTCTTCGCTGCTGTCATCAACCGGAGCCAGGCTTaGGGCCTGGACTCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: SDLLGSYLNGMFLFAAVINRSQA*GLDSRA
Trigger: CGCCCTCGAGTCCAGGCCCCAAGCCTGGCTCCGGTT...GATGACAGCAGCGAAGAGGAACATGCCATTGAGATAACTACCCAAGAGATCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR CCA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAACCCCAATCCAACCTTaGATCTACAAGCGTCTAACT +
Preference number: 4 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRTPIQP*IYKRLT
Trigger: AGTTAGACGCTTGTAGATCCAAGGTTGGATTGGGGT...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTTCACTTTCTTTCTCGTaGCCCGGCTGGCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: RISRSRSSTISVFCSTRTSLSFS*PGWPTL
Trigger: AAGGGTGGGCCAGCCGGGCCACGAGAAAGAAAGTGA...AGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467096.5
CDS-3UTR CCA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGAACAGCTGCCGGTTTTaGATGGAATTATTCCGCAAC +
Preference number: 4 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLNSCRF*MELFRN
Trigger: GTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTT...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGTCCACTAATCCTAAATaGGGTGACCCATTTAAAATG +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLSTNPK*GDPFKM
Trigger: CATTTTAAATGGGTCACCCCATTTAGGATTAGTGGA...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCTCAGTTTGGAAAGGGAAGGCTaGGCAGGGGTTTGGACACTA +
Preference number: 4 (lower is better)
Translates to: VKMPPVLGNVPASWALLSLEREG*AGVWTL
Trigger: TAGTGTCCAAACCCCTGCCCAGCCTTCCCTTTCCAA...ACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCGGAACGTCTCAACCATaGGTTAAAATCAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALGTSQP*VKIRWD
Trigger: ATCCCATCTGATTTTAACCCATGGTTGAGACGTTCC...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGTTATTTTACCCAAATaGGTTGAGGGAACAAAAACC +
Preference number: 4 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLVILPK*VEGTKT
Trigger: GGTTTTTGTTCCCTCAACCCATTTGGGTAAAATAAC...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAAACAGAAAAATACAGTaGTTTGAGGACCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPNRKIQ*FEDPKK
Trigger: CTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTT...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAATCTGACCAATTACGTTaGAAGGGTTTTATTACCTTT +
Preference number: 4 (lower is better)
Translates to: GAGQAPHTREIHTRGTHESDQLR*KGFITF
Trigger: AAAGGTAATAAAACCCTTCCAACGTAATTGGTCAGA...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCAAACCATCTTCAGTTTTaGTACAGGACTGTTCAACGT +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPNHLQF*YRTVQR
Trigger: ACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTT...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
ENST00000483434.5
CDS-3UTR TCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCTACTGTTCTGCCTTGTaGAGCTGTTTCAAACCATCT +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCYCSAL*SCFKPS
Trigger: AGATGGTTTGAAACAGCTTCACAAGGCAGAACAGTA...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
ENST00000483434.5
CDS-3UTR TCA 90 bp AGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTTACTGTTCTGCCTTGTaGAGCTGTTTCAAACCATCT +
Preference number: 4 (lower is better)
Translates to: RTREGGVRGCKGSLPRRPYCSAL*SCFKPS
Trigger: AGATGGTTTGAAACAGCTTCACAAGGCAGAACAGTA...AGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp ACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGTACTGTTCTGCCTTGTaGAGCTGTTTCAAACCATCT +
Preference number: 4 (lower is better)
Translates to: TREGGVRGCKGSLPRRPQYCSAL*SCFKPS
Trigger: AGATGGTTTGAAACAGCTTCACAAGGCAGAACAGTA...CTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCACTGGTCTCGAACTCCTaGCCTCGTGACCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: APLGPYHSTATSVIGKPPLVSNS*PRDRLG
Trigger: GCCAAGGCGGTCACGAGGTCAGGAGTTCGAGACCAG...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCAAGGGAAAGAAACCCTaGGGTACCATGATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GKEESVDAKVRCPDALRFKGKKP*GTMILF
Trigger: GAAAAGAATCATGGTACCTCAGGGTTTCTTTCCCTT...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCGGAGACTGGCCTGGGTaGTCGTTACCTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSGDWPG*SLPPRP
Trigger: GGGCCGTGGAGGTAACGATCACCCAGGCCAGTCTCC...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCGCTAGGATAAAACACTaGAAGCACTTGTGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALARIKH*KHLCQN
Trigger: GTTTTGACACAAGTGCTTTCAGTGTTTTATCCTAGC...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTAACGGGCTGGAGGTGATGTaGCTACTCACTTGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ISRSRSSTISVFCSTRTNGLEVM*LLTCSA
Trigger: AGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCC...GTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493301.5
CDS-3UTR GCA 90 bp AATGCTGGGATCTTTCCTCTCGATTCTTCATGCCTGAGTGATCTCTTGGGTAGTAGCAGGCTGCCGGCCTaGAGGAAGACAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: NAGIFPLDSSCLSDLLGSSRLPA*RKTAGP
Trigger: AGGCCCTGCTGTCTTCCTGCAGGCCGGCAGCCTGCT...ACTACCCAAGAGATCACTCAGGCATGAAGAATCGAGAGGAAAGATCCCAGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR GCA 90 bp GTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCATCGCGGCTCGGCAGGGCCTaGACGGCACGCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: VQRYSQFCQGLYPVLQSSRLGRA*TARWHL
Trigger: CAGGTGCCAGCGTGCCGTGCAGGCCCTGCCGAGCCG...CGATGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464640.5
CDS-3UTR GCA 90 bp GTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCTCAGTAAAAAGATGCAGCTGTaGGCTTCGCCAAGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: VKMPPVLGNVPASWALLSKKMQL*ASPRRR
Trigger: TCTACGCCTTGGCGAAGCGCACAGCTGCATCTTTTT...ACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AAAACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCTCGGCTAACAGCTaGCGGTTTTGGATGGAATTA +
Preference number: 4 (lower is better)
Translates to: KTHSPDRLSRTREGGVRGCSANS*RFWMEL
Trigger: TAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCA...TCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCACACGAAAACCCAATaGCACTTATCGAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: PDRLSRTREGGVRGCKGSHTKTQ*HLSRLH
Trigger: GTGAAGTCTCGATAAGTGGCATTGGGTTTTCGTGTG...CGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGCAGATTCCTCGAGGCTaGACCTCTGCGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMQIPRG*TSAGSW
Trigger: CCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTG...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGGCTTGTCATGAAGGCTaGCCAATTCTTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: TREGGVRGCKGSLPRRPQACHEG*PILSSS
Trigger: AGAAGATGAAAGAATTGGCCAGCCTTCATGACAAGC...CTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACATTCAGGTCAGAAATaGACTGTACAATCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAAHSGQK*TVQSGE
Trigger: TTCGCCAGATTGTACAGTCCATTTCTGACCTGAATG...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCATTCAGGTCAGAAATaGACTGTACAATCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCHSGQK*TVQSGE
Trigger: TTCGCCAGATTGTACAGTCCATTTCTGACCTGAATG...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000483434.5
CDS-3UTR CCA 90 bp CCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGGCTGCCGGTTTTGGATaGAATTATTCCGCAACAACA +
Preference number: 4 (lower is better)
Translates to: PDRLSRTREGGVRGCKGSAAGFG*NYSATT
Trigger: TGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGC...CGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGAACAGCTGCCGGTTTTaGATGGAATTATTCCGCAAC +
Preference number: 4 (lower is better)
Translates to: PDRLSRTREGGVRGCKGSNSCRF*MELFRN
Trigger: GTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTT...CGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAGTGACCCATTTAAAATaGCCTCTGTGTAAATTCACA +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPVTHLK*PLCKFT
Trigger: TGTGAATTTACACAGAGGCCATTTTAAATGGGTCAC...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ACAAACGAGGAGCTTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCGATGAAGTCCTACTTTaGCGGTCTGACCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: TNEELPSQDAPSPWQCACDEVLL*RSDPRS
Trigger: TGAGCGTGGGTCAGACCGCCAAAGTAGGACTTCATC...GCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAAGCTCCTCGTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGGGAACGTCTCAACCATaGGTTAAAATCAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: TREGGVRGCKGSLPRRPQGTSQP*VKIRWD
Trigger: ATCCCATCTGATTTTAACCCATGGTTGAGACGTTCC...CTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCGGAACGTCTCAACCATaGGTTAAAATCAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: WMQRFAAPTPSDSSRLHLGTSQP*VKIRWD
Trigger: ATCCCATCTGATTTTAACCCATGGTTGAGACGTTCC...GAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACCGGCCCAGTAGAGTGTaGAAAAACATGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNRPSRV*KNMRCP
Trigger: TGGGCACCTCATGTTTTTCCACACTCTACTGGGCCG...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAAAGATCAGGAGCTTTaGAAAACGCGTGGTAAACAT +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALKDQEL*KTRGKH
Trigger: ATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTT...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGTTTAAATGCTTGTCATaGAGGCTGGCCAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: TREGGVRGCKGSLPRRPQFKCLS*RLANSF
Trigger: GAAAGAATTGGCCAGCCTTCATGACAAGCATTTAAA...CTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAAGGCTTTCCAATTGTCTaGCTCCCCCTACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKGFPIV*LPLPRA
Trigger: TGCCCTGGGTAGGGGGAGTCAGACAATTGGAAAGCC...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGAACCATCTTCAGTTTTaGTACAGGACTGTTCAACGT +
Preference number: 4 (lower is better)
Translates to: SPWMQRFAAPTPSDSSRLNHLQF*YRTVQR
Trigger: ACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTT...CAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGAAACCATCTTCAGTTTTaGTACAGGACTGTTCAACGT +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRNHLQF*YRTVQR
Trigger: ACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTT...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp ACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAACCATCTTCAGTTTTaGTACAGGACTGTTCAACGT +
Preference number: 4 (lower is better)
Translates to: THSPDRLSRTREGGVRGCNHLQF*YRTVQR
Trigger: ACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTT...GCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCAAACCATCTTCAGTTTTaGTACAGGACTGTTCAACGT +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAANHLQF*YRTVQR
Trigger: ACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTT...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp ACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGGAGAGACATTTTGTGTaGCTGGTCCAAATAAAACAG +
Preference number: 4 (lower is better)
Translates to: TREGGVRGCKGSLPRRPQERHFV*LVQIKQ
Trigger: CTGTTTTATTTGGACCAGTCACACAAAATGTCTCTC...CTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTGAGAGACATTTTGTGTaGCTGGTCCAAATAAAACAG +
Preference number: 4 (lower is better)
Translates to: RTREGGVRGCKGSLPRRPERHFV*LVQIKQ
Trigger: CTGTTTTATTTGGACCAGTCACACAAAATGTCTCTC...AGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGAGAGAGACATTTTGTGTaGCTGGTCCAAATAAAACAG +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRERHFV*LVQIKQ
Trigger: CTGTTTTATTTGGACCAGTCACACAAAATGTCTCTC...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCAGAGAGACATTTTGTGTaGCTGGTCCAAATAAAACAG +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAAERHFV*LVQIKQ
Trigger: CTGTTTTATTTGGACCAGTCACACAAAATGTCTCTC...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGGCTAGGATAAAACACTaGAAGCACTTGTGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLARIKH*KHLCQN
Trigger: GTTTTGACACAAGTGCTTTCAGTGTTTTATCCTAGC...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AATGCTGGGATCTTTCCTCTCGATTCTTCATGCCTGAGTGATCTCTTGGGTAGTGAAGACAGCAGGGCCTaGCTCCCCGGCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: NAGIFPLDSSCLSDLLGSEDSRA*LPGLLT
Trigger: AGTGAGAAGGCCGGGGAGGCAGGCCCTGCTGTCTTC...ACTACCCAAGAGATCACTCAGGCATGAAGAATCGAGAGGAAAGATCCCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR GCA 90 bp AGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCCATGTTCCTCTTCGCTaGTGTCATCCAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: RSEMDCTIWRISRSRSSTHVPLR*CHPGWV
Trigger: GACCCACCCTGGATGACAGCAGCGAAGAGGAACATG...GGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR GCA 90 bp GTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCTCAGTACCATCAGTGTGTTCTaGTCCACCAGAACTAACTGG +
Preference number: 4 (lower is better)
Translates to: VKMPPVLGNVPASWALLSTISVF*STRTNW
Trigger: CCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGT...ACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCCTTTTGATACTGTTCTaGCTTGTGAAGCTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: VRGCKGSLPRRPQIPRGCLLILF*LVKLFQ
Trigger: TTGAAACAGCTTCACAAGGCAGAACAGTATCAAAAG...GCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp AAAACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGACACACGAAAACCCAATaGCACTTATCGAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: KTHSPDRLSRTREGGVRGHTKTQ*HLSRLH
Trigger: GTGAAGTCTCGATAAGTGGCATTGGGTTTTCGTGTG...TCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAAGATGCAAAGGTTCGCTaGCCCGACGCCCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKDAKVR*PDALRF
Trigger: GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAACTCAATCTCTATTGTaGAGCAGTATCAAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRTQSLL*SSIKGP
Trigger: AGGACCTTTGATACTGCTGCACAATAGAGATTGAGT...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGAACTCAATCTCTATTGTaGAGCAGTATCAAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRTQSLL*SSIKGP
Trigger: AGGACCTTTGATACTGCTGCACAATAGAGATTGAGT...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGAAGGGGCATTTTTaGCTCTACTCATCAATTTTT +
Preference number: 4 (lower is better)
Translates to: GQAPHTREIHTRGTHENPMKGHF*LYSSIF
Trigger: AAAAATTGATGAGTAGAGGCAAAAATGCCCCTTCAT...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCTCAGTTTCAAGCTATTCTCCTaGCTCAGCCTCTTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: VKMPPVLGNVPASWALLSFKLFS*LSLLSS
Trigger: GCTACTCAAGAGGCTGAGGCAGGAGAATAGCTTGAA...ACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACCACCCACTTAGGAGGTaGCCGTTTTGTCACACCAAT +
Preference number: 4 (lower is better)
Translates to: ANLSFPLFHHQCVLLHQNHPLRR*PFCHTN
Trigger: ATTGGTGTGACAAAACGGCCACCTCCTAAGTGGGTG...GTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNMDCTI*RISRSR
Trigger: GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCAT...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TGCCTGAGTGATCTCTTGGGTAGTTATCTCAATGGCATGTTCCTCTTCGCTGCTGGCCTAGGCCCTCTTTaGACAACCGGAGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CLSDLLGSYLNGMFLFAAGLGPL*TTGARL
Trigger: AAGCCTGGCTCCGGTTGTCCAAAGAGGGCCTAGGCC...AGCAGCGAAGAGGAACATGCCATTGAGATAACTACCCAAGAGATCACTCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR CCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAAGGAAGGAGGAGTCCGTaGATGCAAAGGTTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKGRRSP*MQRFAA
Trigger: GGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCC...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCAGTGACCCATTTAAAATaGCCTCTGTGTAAATTCACA +
Preference number: 4 (lower is better)
Translates to: APHTREIHTRGTHENPMPVTHLK*PLCKFT
Trigger: TGTGAATTTACACAGAGGCCATTTTAAATGGGTCAC...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCGTTATTTTACCCAAATaGGTTGAGGGAACAAAAACC +
Preference number: 4 (lower is better)
Translates to: GLGKEESVDAKVRCPDALVILPK*VEGTKT
Trigger: GGTTTTTGTTCCCTCAACCCATTTGGGTAAAATAAC...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGAACAGAAAAATACAGTaGTTTGAGGACCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: SPWMQRFAAPTPSDSSRLNRKIQ*FEDPKK
Trigger: CTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTT...CAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTAACAGAAAAATACAGTaGTTTGAGGACCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: RTREGGVRGCKGSLPRRPNRKIQ*FEDPKK
Trigger: CTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTT...AGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCAACAGAAAAATACAGTaGTTTGAGGACCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GKEESVDAKVRCPDALRFNRKIQ*FEDPKK
Trigger: CTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTT...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAAAAGATCAGGAGCTTTaGAAAACGCGTGGTAAACAT +
Preference number: 4 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRKDQEL*KTRGKH
Trigger: ATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTT...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCTTTCAGTTACAATCTTaGGAAAGATCAGGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VRGCKGSLPRRPQIPRGCFQLQS*ERSGAL
Trigger: CAAAGCTCCTGATCTTTCCCAAGATTGTAACTGAAA...GCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCTCTGACCAATTACGTTaGAAGGGTTTTATTACCTTT +
Preference number: 4 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPSDQLR*KGFITF
Trigger: AAAGGTAATAAAACCCTTCCAACGTAATTGGTCAGA...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACCGGCCAACATCATACTaGATTTCATCCACTCCATCC +
Preference number: 4 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNRPTSY*ISSTPS
Trigger: GGATGGAGTGGATGAAATTCAGTATGATGTTGGCCG...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCACGGCCAACATCATACTaGATTTCATCCACTCCATCC +
Preference number: 4 (lower is better)
Translates to: SGESLVPALPPSVCSAPPRPTSY*ISSTPS
Trigger: GGATGGAGTGGATGAAATTCAGTATGATGTTGGCCG...TGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR TCA 90 bp CCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGTTTAAATGCTTGTCATaGAGGCTGGCCAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: PDRLSRTREGGVRGCKGSFKCLS*RLANSF
Trigger: GAAAGAATTGGCCAGCCTTCATGACAAGCATTTAAA...CGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR TCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCGCGTTTGAGGTAGCCTaGCTGTGCGTGCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSAFEVA*LCVPEA
Trigger: AGCTTCCGGCACGCACAGTCAGGCTACCTCAAACGC...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGGGCTTTCCAATTGTCTaGCTCCCCCTACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMGFPIV*LPLPRA
Trigger: TGCCCTGGGTAGGGGGAGTCAGACAATTGGAAAGCC...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGATCGCCCCTAAGTCCCTaGATATTTCATTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: WRISRSRSSTISVFCSTRSPLSP*IFHSGQ
Trigger: CTGACCTGAATGAAATATTCAGGGACTTAGGGGCGA...TCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR TCA 90 bp AGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCACACTTTGTTACTCTaGTCATTAACAGTGATGGAA +
Preference number: 4 (lower is better)
Translates to: RSPWMQRFAAPTPSDSSRHTLLL*SLTVME
Trigger: TTCCATCACTGTTAATGATCAGAGTAACAAAGTGTG...CCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGCACACTTTGTTACTCTaGTCATTAACAGTGATGGAA +
Preference number: 4 (lower is better)
Translates to: TREGGVRGCKGSLPRRPQHTLLL*SLTVME
Trigger: TTCCATCACTGTTAATGATCAGAGTAACAAAGTGTG...CTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGGAACTCCTGACCTCGTaGCCGCCTTGGCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMELLTS*PPWPLK
Trigger: TTTGAGAGGCCAAGGCGGTCACGAGGTCAGGAGTTC...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp ACACTGGCTGAGTCTGGTGGCTTTCATAACACTGTCAAGCTTTCTTTTAATGTGCCACTGCCAGCAGGCTaGCGGCCTGCAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: TLAESGGFHNTVKLSFNVPLPAG*RPAGRQ
Trigger: CTGTCTTCCTGCAGGCCGGCAGCCTGCTGGCAGTGG...CACATTAAAAGAAAGCTTGACAGTGTTATGAAAGCCACCAGACTCAGCCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGAAATTCTTTCATCTTCTaGTTAATCCGGCCAACATCA +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRNSFIF*LIRPTS
Trigger: TGATGTTGGCCGGATTAAGCAGAAGATGAAAGAATT...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCAATTCTTTCATCTTCTaGTTAATCCGGCCAACATCA +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCNSFIF*LIRPTS
Trigger: TGATGTTGGCCGGATTAAGCAGAAGATGAAAGAATT...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
ENST00000483434.5
CDS-3UTR GCA 90 bp TCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCCATGTTCCTCTTCGCTaGTGTCATCCAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SEMDCTIWRISRSRSSTIHVPLR*CHPGWV
Trigger: GACCCACCCTGGATGACAGCAGCGAAGAGGAACATG...GATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR GCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCCGGCTCGGCAGGGCCTaGACGGCACGCTGGCACCTG +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMARLGRA*TARWHL
Trigger: CAGGTGCCAGCGTGCCGTGCAGGCCCTGCCGAGCCG...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGACTTTTGATACTGTTCTaGCTTGTGAAGCTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRLLILF*LVKLFQ
Trigger: TTGAAACAGCTTCACAAGGCAGAACAGTATCAAAAG...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp TGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCCTTTTGATACTGTTCTaGCTTGTGAAGCTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: WMQRFAAPTPSDSSRLHLLLILF*LVKLFQ
Trigger: TTGAAACAGCTTCACAAGGCAGAACAGTATCAAAAG...GAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp AGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCTTTTGATACTGTTCTaGCTTGTGAAGCTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: SPWMQRFAAPTPSDSSRLLLILF*LVKLFQ
Trigger: TTGAAACAGCTTCACAAGGCAGAACAGTATCAAAAG...CAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCTCGAGGCTGCACCTCTaGGGGCAGCTGGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMASRLHL*GQLAGR
Trigger: GCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGA...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCAGATGCAAAGGTTCGCTaGCCCGACGCCCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: APLGPYHSTATSVIGKPPDAKVR*PDALRF
Trigger: GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACGGAGGAGTCCGTGGATaGAAAGGTTCGCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHGGVRG*KGSLPR
Trigger: TCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AAAACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGAATACTGAACAGCTTCTaGAGTGCCTGTAAACTCTCA +
Preference number: 4 (lower is better)
Translates to: KTHSPDRLSRTREGGVRGILNSF*SACKLS
Trigger: TGAGAGTTTACAGGCACTGCAGAAGCTGTTCAGTAT...TCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCATTATGTTAACATTCTaGTCAGACATGGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: VRGCKGSLPRRPQIPRGCIMLTF*SDMAAK
Trigger: TTTAGCAGCCATGTCTGAGCAGAATGTTAACATAAT...GCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCGTCCGCTTCCTGAAATaGCAGGGCCCCTCTAGGACC +
Preference number: 4 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSVRFLK*QGPSRT
Trigger: GGTCCTAGAGGGGCCCTGGCATTTCAGGAAGCGGAC...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGCATGTGTCCAGAGGCTaGATCCAGGGATGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMHVSRG*IQGCPE
Trigger: CTCTGGGCATCCCTGGATGCAGCCTCTGGACACATG...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AAAACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGAGCTTGTCATGAAGGCTaGCCAATTCTTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: KTHSPDRLSRTREGGVRGACHEG*PILSSS
Trigger: AGAAGATGAAAGAATTGGCCAGCCTTCATGACAAGC...TCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CCA 90 bp TTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGTCCACCAGAACTAACTaGTCCTCTGTAAAACCCCGA +
Preference number: 4 (lower is better)
Translates to: FLVKMPPVLGNVPASWALSTRTN*SSVKPR
Trigger: TCGGGGTTTTACAGAGGACCAGTTAGTTCTGGTGGA...CAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGTGACCCATTTAAAATaGCCTCTGTGTAAATTCACA +
Preference number: 4 (lower is better)
Translates to: MQRFAAPTPSDSSRLHLCVTHLK*PLCKFT
Trigger: TGTGAATTTACACAGAGGCCATTTTAAATGGGTCAC...GCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTGTGACCCATTTAAAATaGCCTCTGTGTAAATTCACA +
Preference number: 4 (lower is better)
Translates to: RTREGGVRGCKGSLPRRPVTHLK*PLCKFT
Trigger: TGTGAATTTACACAGAGGCCATTTTAAATGGGTCAC...AGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCGTGACCCATTTAAAATaGCCTCTGTGTAAATTCACA +
Preference number: 4 (lower is better)
Translates to: GKEESVDAKVRCPDALRFVTHLK*PLCKFT
Trigger: TGTGAATTTACACAGAGGCCATTTTAAATGGGTCAC...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCTCCACTAATCCTAAATaGGGTGACCCATTTAAAATG +
Preference number: 4 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCSTNPK*GDPFKM
Trigger: CATTTTAAATGGGTCACCCCATTTAGGATTAGTGGA...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGTCCACTAATCCTAAATaGGGTGACCCATTTAAAATG +
Preference number: 4 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLSTNPK*GDPFKM
Trigger: CATTTTAAATGGGTCACCCCATTTAGGATTAGTGGA...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGTTATTTTACCCAAATaGGTTGAGGGAACAAAAACC +
Preference number: 4 (lower is better)
Translates to: MQRFAAPTPSDSSRLHLCVILPK*VEGTKT
Trigger: GGTTTTTGTTCCCTCAACCCATTTGGGTAAAATAAC...GCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCAGTTATTTTACCCAAATaGGTTGAGGGAACAAAAACC +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAAVILPK*VEGTKT
Trigger: GGTTTTTGTTCCCTCAACCCATTTGGGTAAAATAAC...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCATTTCAGTTACAATCTTaGGAAAGATCAGGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: SVDAKVRCPDALRFLEAAFQLQS*ERSGAL
Trigger: CAAAGCTCCTGATCTTTCCCAAGATTGTAACTGAAA...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GATCTCTTGGGTAGTTATCTCAATGGCATGTTCCTCTTCGCTGCTGTCATCCAGCTAACAGCAGAGGCCTaGCCTAGGCCCTCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: DLLGSYLNGMFLFAAVIQLTAEA*PRPSLD
Trigger: GTCCAAAGAGGGCCTAGGCCAGGCCTCTGCTGTTAG...CTGGATGACAGCAGCGAAGAGGAACATGCCATTGAGATAACTACCCAAGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR TCA 90 bp ACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCTCGCCCCTAAGTCCCTaGATATTTCATTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TIWRISRSRSSTISVFCSSPLSP*IFHSGQ
Trigger: CTGACCTGAATGAAATATTCAGGGACTTAGGGGCGA...GGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR TCA 90 bp ACAAACGAGGAGCTTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCACTGTGGACTGTTTTTaGGGCAAGTTCCCTAATGTG +
Preference number: 4 (lower is better)
Translates to: TNEELPSQDAPSPWQCACTVDCF*GKFPNV
Trigger: CACATTAGGGAACTTGCCTCAAAAACAGTCCACAGT...GCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAAGCTCCTCGTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACAAAAATACAGTGGTTTaGGGACCCCAAGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNKNTVV*GPQEVS
Trigger: GCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTT...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCATACCTCCACTCAACCTaGGCTGCACCCGGACACTTT +
Preference number: 4 (lower is better)
Translates to: APLGPYHSTATSVIGKPPYLHST*AAPGHF
Trigger: AAAGTGTCCGGGTGCAGCTCAGGTTGAGTGGAGGTA...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCATCGCTCGGCTAACAGCTGCTaGGGCCCTGCCCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: FNVIVNSVKDCTLFYNHRSANSC*GPARPP
Trigger: AGGAGGTCGGGCAGGGCCTCAGCAGCTGTTAGCCGA...GCGATGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476384.5
ENST00000483434.5
CDS-3UTR GCA 90 bp ACACTGGCTGAGTCTGGTGGCTTTCATAACACTGTCAAGCTTTCTTTTAATGTGGAAGACAGCAGGGCCTaGCTCCCCGGCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: TLAESGGFHNTVKLSFNVEDSRA*LPGLLT
Trigger: AGTGAGAAGGCCGGGGAGGCAGGCCCTGCTGTCTTC...CACATTAAAAGAAAGCTTGACAGTGTTATGAAAGCCACCAGACTCAGCCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCACATGTTCCTCTTCGCTaGTGTCATCCAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: APLGPYHSTATSVIGKPPHVPLR*CHPGWV
Trigger: GACCCACCCTGGATGACAGCAGCGAAGAGGAACATG...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GATCTCTTGGGTAGTTATCTCAATGGCATGTTCCTCTTCGCTGCTGTCATCCAGCATGTTCCTCTTCGCTaGTGTCATCCAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: DLLGSYLNGMFLFAAVIQHVPLR*CHPGWV
Trigger: GACCCACCCTGGATGACAGCAGCGAAGAGGAACATG...CTGGATGACAGCAGCGAAGAGGAACATGCCATTGAGATAACTACCCAAGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR GCA 90 bp ACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCATCAGTGTGTTCTaGTCCACCAGAACTAACTGG +
Preference number: 4 (lower is better)
Translates to: TIWRISRSRSSTISVFCSTISVF*STRTNW
Trigger: CCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGT...GGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR GCA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGAATTATGTTAACATTCTaGTCAGACATGGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: LGKEESVDAKVRCPDALRIMLTF*SDMAAK
Trigger: TTTAGCAGCCATGTCTGAGCAGAATGTTAACATAAT...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp ACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATGAAGGGGCATTTTTaGCTCTACTCATCAATTTTT +
Preference number: 4 (lower is better)
Translates to: TREGGVRGCKGSLPRRPQMKGHF*LYSSIF
Trigger: AAAAATTGATGAGTAGAGGCAAAAATGCCCCTTCAT...CTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCACCTTGGCAATGTGCCTaGTTCCTGGGCATTGCTCAG +
Preference number: 4 (lower is better)
Translates to: APLGPYHSTATSVIGKPPPWQCA*FLGIAQ
Trigger: CTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGG...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCCATGTGTCCAGAGGCTaGATCCAGGGATGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSHVSRG*IQGCPE
Trigger: CTCTGGGCATCCCTGGATGCAGCCTCTGGACACATG...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CTGGTCCTCTGTAAAACCCCGATGGTAAAGAGTGTTATCGTCTCCATCATCCATCCAGCTCCGCAGCAATaGTACGTGAATGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LVLCKTPMVKSVIVSIIHPAPQQ*YVNAEG
Trigger: GCCCTCTGCATTCACGTAGCATTGCTGCGGAGCTGG...ATGGATGATGGAGACGATAACACTCTTTACCATCGGGGTTTTACAGAGGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493301.5
CDS-3UTR GCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCACAGCAAGCGCAGCAATaGTACGTGAATGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: APLGPYHSTATSVIGKPPQQAQQ*YVNAEG
Trigger: GCCCTCTGCATTCACGTAGCATTGCTGCGCTTGCTG...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358029.8
CDS-3UTR CCA 90 bp TCTTCATGCCTGAGTGATCTCTTGGGTAGTTATCTCAATGGCATGTTCCTCTTCGACCCCTTCCTTTCCTaGACGGCCTGGTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: SSCLSDLLGSYLNGMFLFDPFLS*TAWSST
Trigger: AGTGGAGGACCAGGCCGTCCAGGAAAGGAAGGGGTC...GAAGAGGAACATGCCATTGAGATAACTACCCAAGAGATCACTCAGGCATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR CCA 90 bp CAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCACCCACTTAGGAGGTaGCCGTTTTGTCACACCAAT +
Preference number: 4 (lower is better)
Translates to: QVRNGLYNLANLSFPLFHHPLRR*PFCHTN
Trigger: ATTGGTGTGACAAAACGGCCACCTCCTAAGTGGGTG...GTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp AGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCCACCCACTTAGGAGGTaGCCGTTTTGTCACACCAAT +
Preference number: 4 (lower is better)
Translates to: RSEMDCTIWRISRSRSSTHPLRR*PFCHTN
Trigger: ATTGGTGTGACAAAACGGCCACCTCCTAAGTGGGTG...GGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp TTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGTGCTGTCATCCAGGGTaGGTCTGTTTAAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: FLVKMPPVLGNVPASWALCCHPG*VCLNAC
Trigger: ACAAGCATTTAAACAGACCCACCCTGGATGACAGCA...CAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACTGCTGTCATCCAGGGTaGGTCTGTTTAAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNCCHPG*VCLNAC
Trigger: ACAAGCATTTAAACAGACCCACCCTGGATGACAGCA...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCATGCTGTCATCCAGGGTaGGTCTGTTTAAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: SGESLVPALPPSVCSAPPCCHPG*VCLNAC
Trigger: ACAAGCATTTAAACAGACCCACCCTGGATGACAGCA...TGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp GACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: DCTIWRISRSRSSTISVFMDCTI*RISRSR
Trigger: GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCAT...GAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTGCCAGGCTTGGGGCCTaGACTCGAGGGCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLARLGA*TRGRLQ
Trigger: CTGCAGGCGCCCTCGAGTCCAGGCCCCAAGCCTGGC...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CCA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGCCACCAATGGCTACCTaGAGGTGGCACCAACTTGGA +
Preference number: 4 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMPPMAT*RWHQLG
Trigger: TCCAAGTTGGTGCCACCTCCAGGTAGCCATTGGTGG...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCACCACCAATGGCTACCTaGAGGTGGCACCAACTTGGA +
Preference number: 4 (lower is better)
Translates to: APLGPYHSTATSVIGKPPPPMAT*RWHQLG
Trigger: TCCAAGTTGGTGCCACCTCCAGGTAGCCATTGGTGG...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGATCACTTCACAAGCATaGCCCAGCCAGCACCACCAC +
Preference number: 4 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMITSQA*PSQHHH
Trigger: GTGGTGGTGCTGGCTGGGCCATGCTTGTGAAGTGAT...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CAA 72 bp CCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATaGCTCAGTGGCAATGGAAGAGCCAATAAATCAAAT +
Preference number: 4 (lower is better)
Translates to: PPVLGNVPASWA*LSGNGRANKSN
Trigger: ATTTGATTTATTGGCTCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACACTGGCTGAGTCTGGTGGCTTTCATAACACTGTCAAGCTTTCTTTTAATGTGGCGTTTGAGGTAGCCTaGCTGTGCGTGCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: TLAESGGFHNTVKLSFNVAFEVA*LCVPEA
Trigger: AGCTTCCGGCACGCACAGTCAGGCTACCTCAAACGC...CACATTAAAAGAAAGCTTGACAGTGTTATGAAAGCCACCAGACTCAGCCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAAGATTCTTCATGCGTTTaGGGTAGCCTGACTGTGCGT +
Preference number: 4 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKDSSCV*GSLTVR
Trigger: ACGCACAGTCAGGCTACCTCAAACGCATGAAGAATC...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACTACTGTTCTGCCTTGTaGAGCTGTTTCAAACCATCT +
Preference number: 4 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNYCSAL*SCFKPS
Trigger: AGATGGTTTGAAACAGCTTCACAAGGCAGAACAGTA...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp AAAACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGACACACTTTGTTACTCTaGTCATTAACAGTGATGGAA +
Preference number: 4 (lower is better)
Translates to: KTHSPDRLSRTREGGVRGHTLLL*SLTVME
Trigger: TTCCATCACTGTTAATGATCAGAGTAACAAAGTGTG...TCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACATCGGCTAACAGCTGCTaGGGCCCTGCCCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTSANSC*GPARPP
Trigger: AGGAGGTCGGGCAGGGCCTCAGCAGCTGTTAGCCGA...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359617.8
ENST00000361830.7
CDS-3UTR TCA 90 bp CTGTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCATTCGGCTAACAGCTGCTaGGGCCCTGCCCGACCTCCT +
Preference number: 4 (lower is better)
Translates to: LFNVIVNSVKDCTLFYNHSANSC*GPARPP
Trigger: AGGAGGTCGGGCAGGGCCTCAGCAGCTGTTAGCCGA...ATGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476384.5
ENST00000483434.5
CDS-3UTR GCA 90 bp AAAACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGAAATTCTTTCATCTTCTaGTTAATCCGGCCAACATCA +
Preference number: 4 (lower is better)
Translates to: KTHSPDRLSRTREGGVRGNSFIF*LIRPTS
Trigger: TGATGTTGGCCGGATTAAGCAGAAGATGAAAGAATT...TCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR GCA 90 bp GACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCGGCTAACAGCTaGCGGTTTTGGATGGAATTA +
Preference number: 4 (lower is better)
Translates to: DCTIWRISRSRSSTISVFCSANS*RFWMEL
Trigger: TAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCA...GAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000493301.5
CDS-3UTR GCA 90 bp ACAAACGAGGAGCTTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCATACTGAACAGCTTCTaGAGTGCCTGTAAACTCTCA +
Preference number: 4 (lower is better)
Translates to: TNEELPSQDAPSPWQCACILNSF*SACKLS
Trigger: TGAGAGTTTACAGGCACTGCAGAAGCTGTTCAGTAT...GCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAAGCTCCTCGTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGCCCACAGACAATGGCTaGCAGCGAGTAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMPTDNG*QRVKGK
Trigger: CTTTCCCTTTACTCGCTGGCAGCCATTGTCTGTGGG...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCCACCCACTTAGGAGGTaGCCGTTTTGTCACACCAAT +
Preference number: 4 (lower is better)
Translates to: SEMDCTIWRISRSRSSTIHPLRR*PFCHTN
Trigger: ATTGGTGTGACAAAACGGCCACCTCCTAAGTGGGTG...GATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp GTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCATCGGTGCGTGCCGGAAGCTaGTGGAGAGTTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VQRYSQFCQGLYPVLQSSVRAGS*WRVPAG
Trigger: CCCTGCAGGAACTCTCCACCAGCTTCCGGCACGCAC...CGATGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464640.5
CDS-3UTR CCA 90 bp CAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACTCCACCAGAACTAACTaGTCCTCTGTAAAACCCCGA +
Preference number: 4 (lower is better)
Translates to: QVRNGLYNLANLSFPLFHSTRTN*SSVKPR
Trigger: TCGGGGTTTTACAGAGGACCAGTTAGTTCTGGTGGA...GTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp GAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTATCCACCAGAACTAACTaGTCCTCTGTAAAACCCCGA +
Preference number: 4 (lower is better)
Translates to: ESLVPALPPSVCSAPPELSTRTN*SSVKPR
Trigger: TCGGGGTTTTACAGAGGACCAGTTAGTTCTGGTGGA...TAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp AGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: RNGLYNLANLSFPLFHHQMDCTI*RISRSR
Trigger: GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCAT...CTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp CAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: QKWTVQSGESLVPALPPSMDCTI*RISRSR
Trigger: GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCAT...TGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp AATATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCTTCTCGTGGCCCGGCTaGCCCACCCTTTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: NISFRSEMDCTIWRISRSFSWPG*PTLSRK
Trigger: CTTCCGTGAAAGGGTGGGCCAGCCGGGCCACGAGAA...GGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467096.5
CDS-3UTR CCA 90 bp CGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTGCTGCCGGTTTTGGATaGAATTATTCCGCAACAACA +
Preference number: 4 (lower is better)
Translates to: RISRSRSSTISVFCSTRTAAGFG*NYSATT
Trigger: TGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGC...AGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467096.5
ENST00000493301.5
CDS-3UTR CCA 90 bp CTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTAACTGGTAACAGCTGCCGGTTTTaGATGGAATTATTCCGCAAC +
Preference number: 4 (lower is better)
Translates to: LVPALPPSVCSAPPELTGNSCRF*MELFRN
Trigger: GTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTT...ACCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467096.5
ENST00000493301.5
CDS-3UTR CCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACTGGATTGAGCAAGGATaGCTGGGGATACCCATGGGG +
Preference number: 4 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHWIEQG*LGIPMG
Trigger: CCCCATGGGTATCCCCAGCCATCCTTGCTCAATCCA...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGGATGAAGTCCTACTTTaGCGGTCTGACCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMDEVLL*RSDPRS
Trigger: TGAGCGTGGGTCAGACCGCCAAAGTAGGACTTCATC...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAAGCAAGTTCCCTAATGTaGACAGCCCCACACCTAAGA +
Preference number: 4 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKASSLM*TAPHLR
Trigger: TCTTAGGTGTGGGGCTGTCCACATTAGGGAACTTGC...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCACGGCCCAGTAGAGTGTaGAAAAACATGAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: APLGPYHSTATSVIGKPPRPSRV*KNMRCP
Trigger: TGGGCACCTCATGTTTTTCCACACTCTACTGGGCCG...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACATCACTTCACAAGCATaGCCCAGCCAGCACCACCAC +
Preference number: 4 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHITSQA*PSQHHH
Trigger: GTGGTGGTGCTGGCTGGGCCATGCTTGTGAAGTGAT...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTCCACCAGAACTAACTaGTCCTCCGATGGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: DCTIWRISRSRSSTISVFSTRTN*SSDGKE
Trigger: CTCTTTACCATCGGAGGACCAGTTAGTTCTGGTGGA...GAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464640.5
3UTR CAA 72 bp GTGGACAGCCCCACACCTAAGAGCAGCAGATCTAACTaGGAACGTCTCAACCATGGGTTAAAATCAGATGGG +
Preference number: 4 (lower is better)
Translates to: VDSPTPKSSRSN*ERLNHGLKSDG
Trigger: CCCATCTGATTTTAACCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGCTCTTAGGTGTGGGGCTGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGCACCTGTGGAAGAGCTaGGTGATCTCTTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMHLWKS*VISWVV
Trigger: AACTACCCAAGAGATCACTCAGCTCTTCCACAGGTG...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TCCCTGAATATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTGCGTTTGAGGTAGCCTaGCTGTGCGTGCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLNISFRSEMDCTIWRISAFEVA*LCVPEA
Trigger: AGCTTCCGGCACGCACAGTCAGGCTACCTCAAACGC...AGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAATATTCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464640.5
CDS-3UTR TCA 90 bp AATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTTCGCCCCTAAGTCCCTaGATATTTCATTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: NGLYNLANLSFPLFHHQCSPLSP*IFHSGQ
Trigger: CTGACCTGAATGAAATATTCAGGGACTTAGGGGCGA...ACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR TCA 90 bp CGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTTACTGTTCTGCCTTGTaGAGCTGTTTCAAACCATCT +
Preference number: 4 (lower is better)
Translates to: RISRSRSSTISVFCSTRTYCSAL*SCFKPS
Trigger: AGATGGTTTGAAACAGCTTCACAAGGCAGAACAGTA...AGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR TCA 90 bp CTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTAACTGGTTACTGTTCTGCCTTGTaGAGCTGTTTCAAACCATCT +
Preference number: 4 (lower is better)
Translates to: LVPALPPSVCSAPPELTGYCSAL*SCFKPS
Trigger: AGATGGTTTGAAACAGCTTCACAAGGCAGAACAGTA...ACCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR GCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACAGAAGACAGCAGGGCCTaGCTCCCCGGCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTEDSRA*LPGLLT
Trigger: AGTGAGAAGGCCGGGGAGGCAGGCCCTGCTGTCTTC...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTCCACTGCCAGCAGGCTaGCGGCCTGCAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLPLPAG*RPAGRQ
Trigger: CTGTCTTCCTGCAGGCCGGCAGCCTGCTGGCAGTGG...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCCTGGTGGAGAGTTCCTaGAGGGCCTGCGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMALVESS*RACASE
Trigger: CTCGCTGGCGCAGGCCCTGCAGGAACTCTCCACCAG...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATACCATCAGTGTGTTCTaGTCCACCAGAACTAACTGG +
Preference number: 4 (lower is better)
Translates to: VRNGLYNLANLSFPLFHHTISVF*STRTNW
Trigger: CCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGT...ATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR GCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCACTCAAGCCAAAAAGATaGAGCTGTGCGCTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: APLGPYHSTATSVIGKPPLKPKR*SCALRQ
Trigger: TTGGCGAAGCGCACAGCTGCATCTTTTTGGCTTGAG...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp ACACTGGCTGAGTCTGGTGGCTTTCATAACACTGTCAAGCTTTCTTTTAATGTGGATGCAAAGGTTCGCTaGCCCGACGCCCTCAGATTC +
Preference number: 4 (lower is better)
Translates to: TLAESGGFHNTVKLSFNVDAKVR*PDALRF
Trigger: GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC...CACATTAAAAGAAAGCTTGACAGTGTTATGAAAGCCACCAGACTCAGCCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCCTGCTTCCTGGGCATTaGTCAGTGGCAATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSLLPGH*SVAMEE
Trigger: CTCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAG...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACGCAATGCTACGTGAATaGAGAGGGCTGGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHAMLRE*RGLEVM
Trigger: CATCACCTCCAGCCCTCTGCATTCACGTAGCATTGC...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp CTGGTCCTCTGTAAAACCCCGATGGTAAAGAGTGTTATCGTCTCCATCATCCATGCAATGCTACGTGAATaGAGAGGGCTGGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: LVLCKTPMVKSVIVSIIHAMLRE*RGLEVM
Trigger: CATCACCTCCAGCCCTCTGCATTCACGTAGCATTGC...ATGGATGATGGAGACGATAACACTCTTTACCATCGGGGTTTTACAGAGGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493301.5
CDS-3UTR CCA 90 bp ACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCGCTTGTCATGAAGGCTaGCCAATTCTTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: TIWRISRSRSSTISVFCSACHEG*PILSSS
Trigger: AGAAGATGAAAGAATTGGCCAGCCTTCATGACAAGC...GGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp GGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTTGCTGTCATCCAGGGTaGGTCTGTTTAAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: GLYNLANLSFPLFHHQCVCCHPG*VCLNAC
Trigger: ACAAGCATTTAAACAGACCCACCCTGGATGACAGCA...AACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp GTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATTCCACCAGAACTAACTaGTCCTCTGTAAAACCCCGA +
Preference number: 4 (lower is better)
Translates to: VRNGLYNLANLSFPLFHHSTRTN*SSVKPR
Trigger: TCGGGGTTTTACAGAGGACCAGTTAGTTCTGGTGGA...ATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp AGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTCCACCAGAACTAACTaGTCCTCTGTAAAACCCCGA +
Preference number: 4 (lower is better)
Translates to: RNGLYNLANLSFPLFHHQSTRTN*SSVKPR
Trigger: TCGGGGTTTTACAGAGGACCAGTTAGTTCTGGTGGA...CTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp TCAAGGACTGTACCCTGTTCTACAATCATCGCCCCTAAGTCCCTGAATATTTCACGGTTAAACGCCTGGTaGCCATGTCTCACCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SRTVPCSTIIAPKSLNISRLNAW*PCLTLC
Trigger: GCAAAGGGTGAGACATGGCCACCAGGCGTTTAACCG...TGAAATATTCAGGGACTTAGGGGCGATGATTGTAGAACAGGGTACAGTCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467096.5
CDS-3UTR CCA 90 bp CGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTAACTGGTCCTCTGTAGCTGCCGGTTTTGGATaGAATTATTCCGCAACAACA +
Preference number: 4 (lower is better)
Translates to: RSSTISVFCSTRTNWSSVAAGFG*NYSATT
Trigger: TGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGC...TACAGAGGACCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467096.5
ENST00000493301.5
CDS-3UTR CCA 90 bp GTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCTCAGTTCCACTAATCCTAAATaGGGTGACCCATTTAAAATG +
Preference number: 4 (lower is better)
Translates to: VKMPPVLGNVPASWALLSSTNPK*GDPFKM
Trigger: CATTTTAAATGGGTCACCCCATTTAGGATTAGTGGA...ACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACTTGGAAAGGGAAGGCTaGGCAGGGGTTTGGACACTA +
Preference number: 4 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHLEREG*AGVWTL
Trigger: TAGTGTCCAAACCCCTGCCCAGCCTTCCCTTTCCAA...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCGGTATTGCCACTGTaGACTGTTTTTGAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKPVLPL*TVFEAS
Trigger: ACTTGCCTCAAAAACAGTCCACAGTGGCAATACCGG...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AAAACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATCTGACCAATTACGTTaGAAGGGTTTTATTACCTTT +
Preference number: 4 (lower is better)
Translates to: KTHSPDRLSRTREGGVRGSDQLR*KGFITF
Trigger: AAAGGTAATAAAACCCTTCCAACGTAATTGGTCAGA...TCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCACGGCCAACATCATACTaGATTTCATCCACTCCATCC +
Preference number: 4 (lower is better)
Translates to: APLGPYHSTATSVIGKPPRPTSY*ISSTPS
Trigger: GGATGGAGTGGATGAAATTCAGTATGATGTTGGCCG...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACAGCGTTTGAGGTAGCCTaGCTGTGCGTGCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTAFEVA*LCVPEA
Trigger: AGCTTCCGGCACGCACAGTCAGGCTACCTCAAACGC...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTAACTGGTAACCATCTTCAGTTTTaGTACAGGACTGTTCAACGT +
Preference number: 4 (lower is better)
Translates to: LVPALPPSVCSAPPELTGNHLQF*YRTVQR
Trigger: ACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTT...ACCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR TCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTCTGGTCTCGAACTCCTaGCCTCGTGACCGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLLVSNS*PRDRLG
Trigger: GCCAAGGCGGTCACGAGGTCAGGAGTTCGAGACCAG...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCATTCCTCAAATGCTACTaGTCTCTCCCCAAGTACAGG +
Preference number: 4 (lower is better)
Translates to: APLGPYHSTATSVIGKPPFLKCY*SLPKYR
Trigger: CCTGTACTTGGGGAGAGATCAGTAGCATTTGAGGAA...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGACCATCAGTGTGTTCTaGTCCACCAGAACTAACTGG +
Preference number: 4 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMTISVF*STRTNW
Trigger: CCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGT...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCCACCCACTTAGGAGGTaGCCGTTTTGTCACACCAAT +
Preference number: 4 (lower is better)
Translates to: ISFRSEMDCTIWRISRSRHPLRR*PFCHTN
Trigger: ATTGGTGTGACAAAACGGCCACCTCCTAAGTGGGTG...GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp CTGGTCCTCTGTAAAACCCCGATGGTAAAGAGTGTTATCGTCTCCATCATCCATATGGACTGTACAATCTaGCGAATCTCTCGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: LVLCKTPMVKSVIVSIIHMDCTI*RISRSR
Trigger: GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCAT...ATGGATGATGGAGACGATAACACTCTTTACCATCGGGGTTTTACAGAGGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp CGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTAACTGGTCCTCTGTACATTCAGGTCAGAAATaGACTGTACAATCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: RSSTISVFCSTRTNWSSVHSGQK*TVQSGE
Trigger: TTCGCCAGATTGTACAGTCCATTTCTGACCTGAATG...TACAGAGGACCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp ACACTGGCTGAGTCTGGTGGCTTTCATAACACTGTCAAGCTTTCTTTTAATGTGCGGTTAAACGCCTGGTaGCCATGTCTCACCCTTTGC +
Preference number: 4 (lower is better)
Translates to: TLAESGGFHNTVKLSFNVRLNAW*PCLTLC
Trigger: GCAAAGGGTGAGACATGGCCACCAGGCGTTTAACCG...CACATTAAAAGAAAGCTTGACAGTGTTATGAAAGCCACCAGACTCAGCCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGAACAGCTGCCGGTTTTaGATGGAATTATTCCGCAAC +
Preference number: 4 (lower is better)
Translates to: RNGLYNLANLSFPLFHHQNSCRF*MELFRN
Trigger: GTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTT...CTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000493301.5
CDS-3UTR CCA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACTTTCAGTTACAATCTTaGGAAAGATCAGGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNFQLQS*ERSGAL
Trigger: CAAAGCTCCTGATCTTTCCCAAGATTGTAACTGAAA...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCCGGCCAACATCATACTaGATTTCATCCACTCCATCC +
Preference number: 4 (lower is better)
Translates to: ISFRSEMDCTIWRISRSRRPTSY*ISSTPS
Trigger: GGATGGAGTGGATGAAATTCAGTATGATGTTGGCCG...GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR TCA 90 bp CGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCATCGCCCCTAGATTCTTCATGCGTTTaGGGTAGCCTGACTGTGCGT +
Preference number: 4 (lower is better)
Translates to: RYSQFCQGLYPVLQSSPLDSSCV*GSLTVR
Trigger: ACGCACAGTCAGGCTACCTCAAACGCATGAAGAATC...TAGGGGCGATGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464640.5
CDS-3UTR TCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCTCGCCCCTAAGTCCCTaGATATTTCATTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSSPLSP*IFHSGQ
Trigger: CTGACCTGAATGAAATATTCAGGGACTTAGGGGCGA...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CTGGTCCTCTGTAAAACCCCGATGGTAAAGAGTGTTATCGTCTCCATCATCCATTCGCCCCTAAGTCCCTaGATATTTCATTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LVLCKTPMVKSVIVSIIHSPLSP*IFHSGQ
Trigger: CTGACCTGAATGAAATATTCAGGGACTTAGGGGCGA...ATGGATGATGGAGACGATAACACTCTTTACCATCGGGGTTTTACAGAGGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR TCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAAAAGGGAAAGAAACCCTaGGGTACCATGATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKKGKKP*GTMILF
Trigger: GAAAAGAATCATGGTACCTCAGGGTTTCTTTCCCTT...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTAACTGGTAATTCTTTCATCTTCTaGTTAATCCGGCCAACATCA +
Preference number: 4 (lower is better)
Translates to: LVPALPPSVCSAPPELTGNSFIF*LIRPTS
Trigger: TGATGTTGGCCGGATTAAGCAGAAGATGAAAGAATT...ACCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR GCA 90 bp GGACTGTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCATGTTCCTCTTCGCTaGTGTCATCCAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: GLFNVIVNSVKDCTLFYNHVPLR*CHPGWV
Trigger: GACCCACCCTGGATGACAGCAGCGAAGAGGAACATG...ATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAACAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR GCA 90 bp AATATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCATGTTCCTCTTCGCTaGTGTCATCCAGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: NISFRSEMDCTIWRISRSHVPLR*CHPGWV
Trigger: GACCCACCCTGGATGACAGCAGCGAAGAGGAACATG...GGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR GCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCACCATCAGTGTGTTCTaGTCCACCAGAACTAACTGG +
Preference number: 4 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSTISVF*STRTNW
Trigger: CCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGT...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp ATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCACCATCAGTGTGTTCTaGTCCACCAGAACTAACTGG +
Preference number: 4 (lower is better)
Translates to: ISFRSEMDCTIWRISRSRTISVF*STRTNW
Trigger: CCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGT...GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR GCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCTGCTCGGCTAACAGCTaGCGGTTTTGGATGGAATTA +
Preference number: 4 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSCSANS*RFWMEL
Trigger: TAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCA...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp TTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGATTATGTTAACATTCTaGTCAGACATGGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: FLVKMPPVLGNVPASWALIMLTF*SDMAAK
Trigger: TTTAGCAGCCATGTCTGAGCAGAATGTTAACATAAT...CAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GATTCTTCATGCCTGAGTGATCTCTTGGGTAGTTATCTCAATGGCATGTTCCTCCACCCACTTAGGAGGTaGCCGTTTTGTCACACCAAT +
Preference number: 4 (lower is better)
Translates to: DSSCLSDLLGSYLNGMFLHPLRR*PFCHTN
Trigger: ATTGGTGTGACAAAACGGCCACCTCCTAAGTGGGTG...GAGGAACATGCCATTGAGATAACTACCCAAGAGATCACTCAGGCATGAAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR CCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCAACCCCAATCCAACCTTaGATCTACAAGCGTCTAACT +
Preference number: 4 (lower is better)
Translates to: APLGPYHSTATSVIGKPPTPIQP*IYKRLT
Trigger: AGTTAGACGCTTGTAGATCCAAGGTTGGATTGGGGT...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GGACTGTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCGTCGGTTAAACGCCTaGTGGCCATGTCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: GLFNVIVNSVKDCTLFYNRRLNA*WPCLTL
Trigger: AAGGGTGAGACATGGCCACCAGGCGTTTAACCGACG...ATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAACAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467096.5
CDS-3UTR CCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCCCGGTATTGCCACTGTaGACTGTTTTTGAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSPVLPL*TVFEAS
Trigger: ACTTGCCTCAAAAACAGTCCACAGTGGCAATACCGG...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACTCTGACCAATTACGTTaGAAGGGTTTTATTACCTTT +
Preference number: 4 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNSDQLR*KGFITF
Trigger: AAAGGTAATAAAACCCTTCCAACGTAATTGGTCAGA...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAATTTAAATGCTTGTCATaGAGGCTGGCCAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKFKCLS*RLANSF
Trigger: GAAAGAATTGGCCAGCCTTCATGACAAGCATTTAAA...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TCTTGGGTAGTTATCTCAATGGCATGTTCCTCTTCGCTGCTGTCATCCAGGGTGTTTAAATGCTTGTCATaGAGGCTGGCCAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: SWVVISMACSSSLLSSRVFKCLS*RLANSF
Trigger: GAAAGAATTGGCCAGCCTTCATGACAAGCATTTAAA...CACCCTGGATGACAGCAGCGAAGAGGAACATGCCATTGAGATAACTACCCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR TCA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGGCGTTTGAGGTAGCCTaGCTGTGCGTGCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMAFEVA*LCVPEA
Trigger: AGCTTCCGGCACGCACAGTCAGGCTACCTCAAACGC...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCATCGCCCCTATCGCCCCTAAGTCCCTaGATATTTCATTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RYSQFCQGLYPVLQSSPLSPLSP*IFHSGQ
Trigger: CTGACCTGAATGAAATATTCAGGGACTTAGGGGCGA...TAGGGGCGATGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR TCA 90 bp TCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAACCATCTTCAGTTTTaGTACAGGACTGTTCAACGT +
Preference number: 4 (lower is better)
Translates to: SEMDCTIWRISRSRSSTINHLQF*YRTVQR
Trigger: ACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTT...GATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR TCA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGTACTGTTCTGCCTTGTaGAGCTGTTTCAAACCATCT +
Preference number: 4 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMYCSAL*SCFKPS
Trigger: AGATGGTTTGAAACAGCTTCACAAGGCAGAACAGTA...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCGGGCTGGAGGTGATGTaGCTACTCACTTGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMAGLEVM*LLTCSA
Trigger: AGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCC...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR TCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTCGCAGCAATGCTACGTaGATGCAGAGGGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLRSNAT*MQRAGG
Trigger: ACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCG...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp TCAAGGACTGTACCCTGTTCTACAATCATCGCCCCTAAGTCCCTGAATATTTCATGCTCGGCTAACAGCTaGCGGTTTTGGATGGAATTA +
Preference number: 4 (lower is better)
Translates to: SRTVPCSTIIAPKSLNISCSANS*RFWMEL
Trigger: TAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCA...TGAAATATTCAGGGACTTAGGGGCGATGATTGTAGAACAGGGTACAGTCCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464640.5
ENST00000467096.5
CDS-3UTR GCA 90 bp CAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCATCGCCCTGCTCGGCTAACAGCTaGCGGTTTTGGATGGAATTA +
Preference number: 4 (lower is better)
Translates to: QRYSQFCQGLYPVLQSSPCSANS*RFWMEL
Trigger: TAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCA...GGGCGATGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464640.5
ENST00000467096.5
CDS-3UTR GCA 90 bp GGCACACACGAAAACCCAATGCCACTTATCGAGACTTCACGCCAACGAGGACAACTTTTGATACTGTTCTaGCTTGTGAAGCTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: GTHENPMPLIETSRQRGQLLILF*LVKLFQ
Trigger: TTGAAACAGCTTCACAAGGCAGAACAGTATCAAAAG...TTGTCCTCGTTGGCGTGAAGTCTCGATAAGTGGCATTGGGTTTTCGTGTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467096.5
ENST00000483434.5
CDS-3UTR GCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACACCTTGGCAATGTGCCTaGTTCCTGGGCATTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTPWQCA*FLGIAQ
Trigger: CTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGG...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACACAGAAGTCCGGTATTaGCACTGTGGACTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHTEVRY*HCGLFL
Trigger: CAAAAACAGTCCACAGTGGCAATACCGGACTTCTGT...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ACACTGGCTGAGTCTGGTGGCTTTCATAACACTGTCAAGCTTTCTTTTAATGTGCACCCACTTAGGAGGTaGCCGTTTTGTCACACCAAT +
Preference number: 4 (lower is better)
Translates to: TLAESGGFHNTVKLSFNVHPLRR*PFCHTN
Trigger: ATTGGTGTGACAAAACGGCCACCTCCTAAGTGGGTG...CACATTAAAAGAAAGCTTGACAGTGTTATGAAAGCCACCAGACTCAGCCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCTGCTGTCATCCAGGGTaGGTCTGTTTAAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSCCHPG*VCLNAC
Trigger: ACAAGCATTTAAACAGACCCACCCTGGATGACAGCA...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AGTGATCTCTTGGGTAGTTATCTCAATGGCATGTTCCTCTTCGCTGCTGTCATCTGCTGTCATCCAGGGTaGGTCTGTTTAAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: SDLLGSYLNGMFLFAAVICCHPG*VCLNAC
Trigger: ACAAGCATTTAAACAGACCCACCCTGGATGACAGCA...GATGACAGCAGCGAAGAGGAACATGCCATTGAGATAACTACCCAAGAGATCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR CCA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGCATTCAGGTCAGAAATaGACTGTACAATCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMHSGQK*TVQSGE
Trigger: TTCGCCAGATTGTACAGTCCATTTCTGACCTGAATG...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACATTGAGCAAGGATGGCTaGGGATACCCATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTLSKDG*GYPWGH
Trigger: GTGTCCCCATGGGTATCCCCAGCCATCCTTGCTCAA...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCCAGAGGAGACTGGCCTaGGTGATCGTTACCTCCACG +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMAQRRLA*VIVTST
Trigger: CGTGGAGGTAACGATCACCCAGGCCAGTCTCCTCTG...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CAA 72 bp CTTCAGGGGTTTGTAAGGCTCAGCACTTTAAAAAGCTaGAACAGAAGTCCGGTATTGCCACTGTGGACTGTT +
Preference number: 4 (lower is better)
Translates to: LQGFVRLSTLKS*NRSPVLPLWTV
Trigger: AACAGTCCACAGTGGCAATACCGGACTTCTGTTCAAGCTTTTTAAAGTGCTGAGCCTTACAAACCCCTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACCACCATTTAAATGCTTGTCATaGAGGCTGGCCAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: APLGPYHSTATSVIGKPPFKCLS*RLANSF
Trigger: GAAAGAATTGGCCAGCCTTCATGACAAGCATTTAAA...TGGTGGTTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GGACTGTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCACCTGTGGAAGAGCTaGGTGATCTCTTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: GLFNVIVNSVKDCTLFYNHLWKS*VISWVV
Trigger: AACTACCCAAGAGATCACTCAGCTCTTCCACAGGTG...ATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAACAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464640.5
CDS-3UTR TCA 90 bp ACACTGGCTGAGTCTGGTGGCTTTCATAACACTGTCAAGCTTTCTTTTAATGTGTCGCCCCTAAGTCCCTaGATATTTCATTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TLAESGGFHNTVKLSFNVSPLSP*IFHSGQ
Trigger: CTGACCTGAATGAAATATTCAGGGACTTAGGGGCGA...CACATTAAAAGAAAGCTTGACAGTGTTATGAAAGCCACCAGACTCAGCCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMAAEGWR*CDYSLA
Trigger: AGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGC...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR TCA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGCGCAGCAATGCTACGTaGATGCAGAGGGCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMRSNAT*MQRAGG
Trigger: ACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCG...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
CDS-3UTR GCA 90 bp GCCAGGGCCCCTCTAGGACCTTATCATTCCACAGCCACATCAGTAATAGGAAAACTTTTGATACTGTTCTaGCTTGTGAAGCTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: ARAPLGPYHSTATSVIGKLLILF*LVKLFQ
Trigger: TTGAAACAGCTTCACAAGGCAGAACAGTATCAAAAG...TTTTCCTATTACTGATGTGGCTGTGGAATGATAAGGTCCTAGAGGGGCCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp TCAAGGACTGTACCCTGTTCTACAATCATCGCCCCTAAGTCCCTGAATATTTCACACACGAAAACCCAATaGCACTTATCGAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: SRTVPCSTIIAPKSLNISHTKTQ*HLSRLH
Trigger: GTGAAGTCTCGATAAGTGGCATTGGGTTTTCGTGTG...TGAAATATTCAGGGACTTAGGGGCGATGATTGTAGAACAGGGTACAGTCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467096.5
ENST00000483434.5
CDS-3UTR CCA 90 bp TCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTAACTGGTCCTCTGTAAAAGCTTGTCATGAAGGCTaGCCAATTCTTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SSTISVFCSTRTNWSSVKACHEG*PILSSS
Trigger: AGAAGATGAAAGAATTGGCCAGCCTTCATGACAAGC...TTTTACAGAGGACCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp CAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCATCGCCCTGCTGTCATCCAGGGTaGGTCTGTTTAAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: QRYSQFCQGLYPVLQSSPCCHPG*VCLNAC
Trigger: ACAAGCATTTAAACAGACCCACCCTGGATGACAGCA...GGGCGATGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR CCA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGTCACTTTCTTTCTCGTaGCCCGGCTGGCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMSLSFS*PGWPTL
Trigger: AAGGGTGGGCCAGCCGGGCCACGAGAAAGAAAGTGA...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TCAAGGACTGTACCCTGTTCTACAATCATCGCCCCTAAGTCCCTGAATATTTCAAACAGCTGCCGGTTTTaGATGGAATTATTCCGCAAC +
Preference number: 4 (lower is better)
Translates to: SRTVPCSTIIAPKSLNISNSCRF*MELFRN
Trigger: GTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTT...TGAAATATTCAGGGACTTAGGGGCGATGATTGTAGAACAGGGTACAGTCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464640.5
ENST00000467096.5
CDS-3UTR CCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCTTGAGCAAGGATGGCTaGGGATACCCATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMALSKDG*GYPWGH
Trigger: GTGTCCCCATGGGTATCCCCAGCCATCCTTGCTCAA...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACAGATGAAGTCCTACTTTaGCGGTCTGACCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTDEVLL*RSDPRS
Trigger: TGAGCGTGGGTCAGACCGCCAAAGTAGGACTTCATC...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGGAGGTGGCACCAACTTaGAAAGGGAAGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMEVAPT*KGKAGQ
Trigger: CTGCCCAGCCTTCCCTTTCCAAGTTGGTGCCACCTC...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
3UTR CAA 72 bp CTCAGCACTTTAAAAAGCTTGAACAGAAGTCCGGTATaGCCACTGTGGACTGTTTTTGAGGCAAGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: LSTLKSLNRSPV*PLWTVFEASSL
Trigger: TAGGGAACTTGCCTCAAAAACAGTCCACAGTGGCAATACCGGACTTCTGTTCAAGCTTTTTAAAGTGCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TCCCTGAATATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGGCCAACATCATACTaGATTTCATCCACTCCATCC +
Preference number: 4 (lower is better)
Translates to: SLNISFRSEMDCTIWRISRPTSY*ISSTPS
Trigger: GGATGGAGTGGATGAAATTCAGTATGATGTTGGCCG...AGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAATATTCAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR TCA 90 bp AATATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGGCCAACATCATACTaGATTTCATCCACTCCATCC +
Preference number: 4 (lower is better)
Translates to: NISFRSEMDCTIWRISRSRPTSY*ISSTPS
Trigger: GGATGGAGTGGATGAAATTCAGTATGATGTTGGCCG...GGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR TCA 90 bp CTGGTCCTCTGTAAAACCCCGATGGTAAAGAGTGTTATCGTCTCCATCATCCATTTTAAATGCTTGTCATaGAGGCTGGCCAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: LVLCKTPMVKSVIVSIIHFKCLS*RLANSF
Trigger: GAAAGAATTGGCCAGCCTTCATGACAAGCATTTAAA...ATGGATGATGGAGACGATAACACTCTTTACCATCGGGGTTTTACAGAGGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR TCA 90 bp TCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTAACTGGTCCTCTGTAAAAAACCATCTTCAGTTTTaGTACAGGACTGTTCAACGT +
Preference number: 4 (lower is better)
Translates to: SSTISVFCSTRTNWSSVKNHLQF*YRTVQR
Trigger: ACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTT...TTTTACAGAGGACCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR TCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACAGAGTGTGGAAAAACATaGGGTGCCCACAGACAATGG +
Preference number: 4 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTECGKT*GAHRQW
Trigger: CCATTGTCTGTGGGCACCTCATGTTTTTCCACACTC...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GATACAGGACTGTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCCACACGAAAACCCAATaGCACTTATCGAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: DTGLFNVIVNSVKDCTLFHTKTQ*HLSRLH
Trigger: GTGAAGTCTCGATAAGTGGCATTGGGTTTTCGTGTG...GAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAACAGTCCTGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467096.5
ENST00000483434.5
CDS-3UTR GCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCCTGCTTCCTGGGCATTaGTCAGTGGCAATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMALLPGH*SVAMEE
Trigger: CTCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAG...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TTTCCTCTCGATTCTTCATGCCTGAGTGATCTCTTGGGTAGTTATCTCAATGGCGCTTGTCATGAAGGCTaGCCAATTCTTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: FPLDSSCLSDLLGSYLNGACHEG*PILSSS
Trigger: AGAAGATGAAAGAATTGGCCAGCCTTCATGACAAGC...GCCATTGAGATAACTACCCAAGAGATCACTCAGGCATGAAGAATCGAGAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR CCA 90 bp ACACTGGCTGAGTCTGGTGGCTTTCATAACACTGTCAAGCTTTCTTTTAATGTGTGCTGTCATCCAGGGTaGGTCTGTTTAAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: TLAESGGFHNTVKLSFNVCCHPG*VCLNAC
Trigger: ACAAGCATTTAAACAGACCCACCCTGGATGACAGCA...CACATTAAAAGAAAGCTTGACAGTGTTATGAAAGCCACCAGACTCAGCCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTTGGCCTCTCAAAGTCTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLWPLKV*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAGACTTTGAGAGGCCA...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGATCACTTCACAAGCATaGCCCAGCCAGCACCACCAC +
Preference number: 4 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMITSQA*PSQHHH
Trigger: GTGGTGGTGCTGGCTGGGCCATGCTTGTGAAGTGAT...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TCAAGGACTGTACCCTGTTCTACAATCATCGCCCCTAAGTCCCTGAATATTTCATTTAAATGCTTGTCATaGAGGCTGGCCAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: SRTVPCSTIIAPKSLNISFKCLS*RLANSF
Trigger: GAAAGAATTGGCCAGCCTTCATGACAAGCATTTAAA...TGAAATATTCAGGGACTTAGGGGCGATGATTGTAGAACAGGGTACAGTCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR TCA 90 bp AGGACTGTACCCTGTTCTACAATCATCGCCCCTAAGTCCCTGAATATTTCATTCAACCATCTTCAGTTTTaGTACAGGACTGTTCAACGT +
Preference number: 4 (lower is better)
Translates to: RTVPCSTIIAPKSLNISFNHLQF*YRTVQR
Trigger: ACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTT...GAATGAAATATTCAGGGACTTAGGGGCGATGATTGTAGAACAGGGTACAGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR TCA 90 bp AGTACAGGCTCAACAGAAAAATACAGTGGTTTGAGGACCCCAAGAAGTCAGCACCACACTTTGTTACTCTaGTCATTAACAGTGATGGAA +
Preference number: 4 (lower is better)
Translates to: STGSTEKYSGLRTPRSQHHTLLL*SLTVME
Trigger: TTCCATCACTGTTAATGATCAGAGTAACAAAGTGTG...GTGCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTTGAGCCTGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp AGTGATCTCTTGGGTAGTTATCTCAATGGCATGTTCCTCTTCGCTGCTGTCATCAATTCTTTCATCTTCTaGTTAATCCGGCCAACATCA +
Preference number: 4 (lower is better)
Translates to: SDLLGSYLNGMFLFAAVINSFIF*LIRPTS
Trigger: TGATGTTGGCCGGATTAAGCAGAAGATGAAAGAATT...GATGACAGCAGCGAAGAGGAACATGCCATTGAGATAACTACCCAAGAGATCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR GCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCCTCAAGCCAAAAAGATaGAGCTGTGCGCTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMALKPKR*SCALRQ
Trigger: TTGGCGAAGCGCACAGCTGCATCTTTTTGGCTTGAG...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGATGAAGGGGCATTTTTaGCTCTACTCATCAATTTTT +
Preference number: 4 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMMKGHF*LYSSIF
Trigger: AAAAATTGATGAGTAGAGGCAAAAATGCCCCTTCAT...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTTGGAAAAACATGAGGTaGCCACAGACAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLWKNMR*PQTMAA
Trigger: GGCAGCCATTGTCTGTGGGCACCTCATGTTTTTCCA...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCTGGAAAAACATGAGGTaGCCACAGACAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMAWKNMR*PQTMAA
Trigger: GGCAGCCATTGTCTGTGGGCACCTCATGTTTTTCCA...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AATATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCTGCTGTCATCCAGGGTaGGTCTGTTTAAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: NISFRSEMDCTIWRISRSCCHPG*VCLNAC
Trigger: ACAAGCATTTAAACAGACCCACCCTGGATGACAGCA...GGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR CCA 90 bp GGACTGTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATGCTGCCGGTTTTGGATaGAATTATTCCGCAACAACA +
Preference number: 4 (lower is better)
Translates to: GLFNVIVNSVKDCTLFYNAAGFG*NYSATT
Trigger: TGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGC...ATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAACAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464640.5
ENST00000467096.5
CDS-3UTR CCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCAATGTGCCTGCTTCCTaGGCATTGCTCAGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMANVPAS*ALLSGN
Trigger: ATTGCCACTGAGCAATGCCCAGGAAGCAGGCACATT...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp ACACTGGCTGAGTCTGGTGGCTTTCATAACACTGTCAAGCTTTCTTTTAATGTGGGAACGTCTCAACCATaGGTTAAAATCAGATGGGAT +
Preference number: 4 (lower is better)
Translates to: TLAESGGFHNTVKLSFNVGTSQP*VKIRWD
Trigger: ATCCCATCTGATTTTAACCCATGGTTGAGACGTTCC...CACATTAAAAGAAAGCTTGACAGTGTTATGAAAGCCACCAGACTCAGCCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTGCAAGTTCCCTAATGTaGACAGCCCCACACCTAAGA +
Preference number: 4 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLASSLM*TAPHLR
Trigger: TCTTAGGTGTGGGGCTGTCCACATTAGGGAACTTGC...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACACCGGTATTGCCACTGTaGACTGTTTTTGAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTPVLPL*TVFEAS
Trigger: ACTTGCCTCAAAAACAGTCCACAGTGGCAATACCGG...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCGTTATTTTACCCAAATaGGTTGAGGGAACAAAAACC +
Preference number: 4 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSVILPK*VEGTKT
Trigger: GGTTTTTGTTCCCTCAACCCATTTGGGTAAAATAAC...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GATACAGGACTGTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTTTAAATGCTTGTCATaGAGGCTGGCCAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: DTGLFNVIVNSVKDCTLFFKCLS*RLANSF
Trigger: GAAAGAATTGGCCAGCCTTCATGACAAGCATTTAAA...GAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAACAGTCCTGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR TCA 90 bp TCCCTGAATATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTTACTGTTCTGCCTTGTaGAGCTGTTTCAAACCATCT +
Preference number: 4 (lower is better)
Translates to: SLNISFRSEMDCTIWRISYCSAL*SCFKPS
Trigger: AGATGGTTTGAAACAGCTTCACAAGGCAGAACAGTA...AGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAATATTCAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR TCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCTGGACACTAAGCCCATaGGCTGTTTGGACAACTTCA +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMAWTLSP*AVWTTS
Trigger: TGAAGTTGTCCAAACAGCTCATGGGCTTAGTGTCCA...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACAAAAAATACAGTGGTTTaGGGACCCCAAGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTKNTVV*GPQEVS
Trigger: GCTGACTTCTTGGGGTCCTCAAACCACTGTATTTTT...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp CAAACCATCTTCAGTTTTGATACAGGACTGTTCAACGTTATAGTCAATTCTGTCACCATCAGTGTGTTCTaGTCCACCAGAACTAACTGG +
Preference number: 4 (lower is better)
Translates to: QTIFSFDTGLFNVIVNSVTISVF*STRTNW
Trigger: CCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGT...GACAGAATTGACTATAACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR GCA 90 bp ATCTTCAGTTTTGATACAGGACTGTTCAACGTTATAGTCAATTCTGTCAAGGACACCATCAGTGTGTTCTaGTCCACCAGAACTAACTGG +
Preference number: 4 (lower is better)
Translates to: IFSFDTGLFNVIVNSVKDTISVF*STRTNW
Trigger: CCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGT...GTCCTTGACAGAATTGACTATAACGTTGAACAGTCCTGTATCAAAACTGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR CCA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGCACCCACTTAGGAGGTaGCCGTTTTGTCACACCAAT +
Preference number: 4 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMHPLRR*PFCHTN
Trigger: ATTGGTGTGACAAAACGGCCACCTCCTAAGTGGGTG...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACATGCTGTCATCCAGGGTaGGTCTGTTTAAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTCCHPG*VCLNAC
Trigger: ACAAGCATTTAAACAGACCCACCCTGGATGACAGCA...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp AAGCATCTTCCGATTCTTCTTTTGATACTGTTCTGCCTTGTGAAGCTGTTTCAATGCTGTCATCCAGGGTaGGTCTGTTTAAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: KHLPILLLILFCLVKLFQCCHPG*VCLNAC
Trigger: ACAAGCATTTAAACAGACCCACCCTGGATGACAGCA...TTGAAACAGCTTCACAAGGCAGAACAGTATCAAAAGAAGAATCGGAAGATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR CCA 90 bp TTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCATCGCCATTCAGGTCAGAAATaGACTGTACAATCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: FNVIVNSVKDCTLFYNHRHSGQK*TVQSGE
Trigger: TTCGCCAGATTGTACAGTCCATTTCTGACCTGAATG...GCGATGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR CCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACAGCTGCCGGTTTTGGATaGAATTATTCCGCAACAACA +
Preference number: 4 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTAAGFG*NYSATT
Trigger: TGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGC...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCGCAGCAGATCTAACTTaGAACGTCTCAACCATGGGT +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMAAADLT*NVSTMG
Trigger: ACCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGC...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCCCGGTATTGCCACTGTaGACTGTTTTTGAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMAPVLPL*TVFEAS
Trigger: ACTTGCCTCAAAAACAGTCCACAGTGGCAATACCGG...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TTAAAATCACAAGCATCTTCCGATTCTTCTTTTGATACTGTTCTGCCTTGTGAACGGCCAACATCATACTaGATTTCATCCACTCCATCC +
Preference number: 4 (lower is better)
Translates to: LKSQASSDSSFDTVLPCERPTSY*ISSTPS
Trigger: GGATGGAGTGGATGAAATTCAGTATGATGTTGGCCG...TTCACAAGGCAGAACAGTATCAAAAGAAGAATCGGAAGATGCTTGTGATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR TCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACATACTGTTCTGCCTTGTaGAGCTGTTTCAAACCATCT +
Preference number: 4 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTYCSAL*SCFKPS
Trigger: AGATGGTTTGAAACAGCTTCACAAGGCAGAACAGTA...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCTTTACCCAAATGGGTTaGGGGAACAAAAACCAACCC +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMAFTQMG*GNKNQP
Trigger: GGGTTGGTTTTTGTTCCCTCAACCCATTTGGGTAAA...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp ACACTGGCTGAGTCTGGTGGCTTTCATAACACTGTCAAGCTTTCTTTTAATGTGAATTCTTTCATCTTCTaGTTAATCCGGCCAACATCA +
Preference number: 4 (lower is better)
Translates to: TLAESGGFHNTVKLSFNVNSFIF*LIRPTS
Trigger: TGATGTTGGCCGGATTAAGCAGAAGATGAAAGAATT...CACATTAAAAGAAAGCTTGACAGTGTTATGAAAGCCACCAGACTCAGCCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GATACAGGACTGTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCAATTCTTTCATCTTCTaGTTAATCCGGCCAACATCA +
Preference number: 4 (lower is better)
Translates to: DTGLFNVIVNSVKDCTLFNSFIF*LIRPTS
Trigger: TGATGTTGGCCGGATTAAGCAGAAGATGAAAGAATT...GAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAACAGTCCTGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR CCA 90 bp CTGTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCATGCTTGTCATGAAGGCTaGCCAATTCTTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LFNVIVNSVKDCTLFYNHACHEG*PILSSS
Trigger: AGAAGATGAAAGAATTGGCCAGCCTTCATGACAAGC...ATGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR CCA 90 bp ACTGTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCACATTCAGGTCAGAAATaGACTGTACAATCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: TVQRYSQFCQGLYPVLQSHSGQK*TVQSGE
Trigger: TTCGCCAGATTGTACAGTCCATTTCTGACCTGAATG...TGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR CCA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGGCAGCAGATCTAACTTaGAACGTCTCAACCATGGGT +
Preference number: 4 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMAADLT*NVSTMG
Trigger: ACCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGC...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp ACTGTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCATTTAAATGCTTGTCATaGAGGCTGGCCAATTCTTTC +
Preference number: 4 (lower is better)
Translates to: TVQRYSQFCQGLYPVLQSFKCLS*RLANSF
Trigger: GAAAGAATTGGCCAGCCTTCATGACAAGCATTTAAA...TGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR GCA 90 bp TCCCTGAATATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTAATTCTTTCATCTTCTaGTTAATCCGGCCAACATCA +
Preference number: 4 (lower is better)
Translates to: SLNISFRSEMDCTIWRISNSFIF*LIRPTS
Trigger: TGATGTTGGCCGGATTAAGCAGAAGATGAAAGAATT...AGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAATATTCAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
CDS-3UTR GCA 90 bp GTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCATCGCTTTTGATACTGTTCTaGCTTGTGAAGCTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: VQRYSQFCQGLYPVLQSSLLILF*LVKLFQ
Trigger: TTGAAACAGCTTCACAAGGCAGAACAGTATCAAAAG...CGATGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR CCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTGCTTGTCATGAAGGCTaGCCAATTCTTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLACHEG*PILSSS
Trigger: AGAAGATGAAAGAATTGGCCAGCCTTCATGACAAGC...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTCATTCAGGTCAGAAATaGACTGTACAATCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLHSGQK*TVQSGE
Trigger: TTCGCCAGATTGTACAGTCCATTTCTGACCTGAATG...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCCATTCAGGTCAGAAATaGACTGTACAATCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMAHSGQK*TVQSGE
Trigger: TTCGCCAGATTGTACAGTCCATTTCTGACCTGAATG...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCGCTAGGATAAAACACTaGAAGCACTTGTGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMAARIKH*KHLCQN
Trigger: GTTTTGACACAAGTGCTTTCAGTGTTTTATCCTAGC...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp ACTGTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCAAATTCTTTCATCTTCTaGTTAATCCGGCCAACATCA +
Preference number: 4 (lower is better)
Translates to: TVQRYSQFCQGLYPVLQSNSFIF*LIRPTS
Trigger: TGATGTTGGCCGGATTAAGCAGAAGATGAAAGAATT...TGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR GCA 90 bp ACTGTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCTACAATCACTTTTGATACTGTTCTaGCTTGTGAAGCTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: TVQRYSQFCQGLYPVLQSLLILF*LVKLFQ
Trigger: TTGAAACAGCTTCACAAGGCAGAACAGTATCAAAAG...TGATTGTAGAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR GCA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGATACTGAACAGCTTCTaGAGTGCCTGTAAACTCTCA +
Preference number: 4 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMILNSF*SACKLS
Trigger: TGAGAGTTTACAGGCACTGCAGAAGCTGTTCAGTAT...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TTAAAATCACAAGCATCTTCCGATTCTTCTTTTGATACTGTTCTGCCTTGTGAAGCTTGTCATGAAGGCTaGCCAATTCTTTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LKSQASSDSSFDTVLPCEACHEG*PILSSS
Trigger: AGAAGATGAAAGAATTGGCCAGCCTTCATGACAAGC...TTCACAAGGCAGAACAGTATCAAAAGAAGAATCGGAAGATGCTTGTGATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR CCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTAAAGATCAGGAGCTTTaGAAAACGCGTGGTAAACAT +
Preference number: 4 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLKDQEL*KTRGKH
Trigger: ATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTT...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACATTTCAGTTACAATCTTaGGAAAGATCAGGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTFQLQS*ERSGAL
Trigger: CAAAGCTCCTGATCTTTCCCAAGATTGTAACTGAAA...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR TCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTCACACTTTGTTACTCTaGTCATTAACAGTGATGGAA +
Preference number: 4 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLHTLLL*SLTVME
Trigger: TTCCATCACTGTTAATGATCAGAGTAACAAAGTGTG...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGAACAGAAAAATACAGTaGTTTGAGGACCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMNRKIQ*FEDPKK
Trigger: CTTCTTGGGGTCCTCAAACCACTGTATTTTTCTGTT...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGAATTCTTTCATCTTCTaGTTAATCCGGCCAACATCA +
Preference number: 4 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMNSFIF*LIRPTS
Trigger: TGATGTTGGCCGGATTAAGCAGAAGATGAAAGAATT...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR GCA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGCTTTTGATACTGTTCTaGCTTGTGAAGCTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMLLILF*LVKLFQ
Trigger: TTGAAACAGCTTCACAAGGCAGAACAGTATCAAAAG...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CCA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTTCTGACCAATTACGTTaGAAGGGTTTTATTACCTTT +
Preference number: 4 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLSDQLR*KGFITF
Trigger: AAAGGTAATAAAACCCTTCCAACGTAATTGGTCAGA...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACATGGCCTAGGCCCTCTTaGGACAACCGGAGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTWPRPS*DNRSQA
Trigger: AGCCTGGCTCCGGTTGTCCAAAGAGGGCCTAGGCCA...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CAA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACATTCCCCGGACCGCTaGAGCAGGACTAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAAHSPDR*SRTREG
Trigger: TCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATG...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CAA 90 bp CAGCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCATTCCCCGGACCGCTaGAGCAGGACTAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: QLAGRRPSPSHPGDPHARHSPDR*SRTREG
Trigger: TCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATG...CCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS GCA 90 bp CTCCACTGCCAGCAGGCTGCCGGCCTGCAGGAAGACAGCAGGGCCTaGCTCCCCGGCCTTCTCACTCCTCTTCTCCGGCTCCCTCCATCC +
Preference number: 5 (lower is better)
Translates to: LHCQQAAGLQEDSRA*LPGLLTPLLRLPPS
Trigger: GGATGGAGGGAGCCGGAGAAGAGGAGTGAGAAGGCCGGGGAGGCAGGCCCTGCTGTCTTCCTGCAGGCCGGCAGCCTGCTGGCAGTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312283.12
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
ENST00000412911.5
ENST00000458280.5
ENST00000460655.5
CDS GCA 90 bp CTTTCCTGGACGGCCTGGTCCTCCACTGCCAGCAGGCTGCCGGCCTaGAGGAAGACAGCAGGGCCTGCCTCCCCGGCCTTCTCACTCCTC +
Preference number: 5 (lower is better)
Translates to: LSWTAWSSTASRLPA*RKTAGPASPAFSLL
Trigger: GAGGAGTGAGAAGGCCGGGGAGGCAGGCCCTGCTGTCTTCCTGCAGGCCGGCAGCCTGCTGGCAGTGGAGGACCAGGCCGTCCAGGAAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000312283.12
ENST00000355957.9
ENST00000359617.8
ENST00000361830.7
ENST00000371141.8
ENST00000412911.5
ENST00000458280.5
ENST00000460655.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR CAA 90 bp GGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGACTCCCTTCTGGGGACTaGTCTGAACCTGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: GRRPSPSHPGDPHARHTRLPSGD*SEPAEA
Trigger: GGCCTCAGCAGGTTCAGACAAGTCCCCAGAAGGGAG...TCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CAA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCATTCCCCGGACCGCTaGAGCAGGACTAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRHSPDR*SRTREG
Trigger: TCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATG...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CAA 90 bp CCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGAGATGCCCCCAGTCCTaGGCAATGTGCCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: PDALRFLEAAPLRAAGGARCPQS*AMCLLP
Trigger: AGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCT...CGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS CCA 90 bp GCTGTGACTCAGTTTCCGCACCAGAGGCCTGGCCTAGGCCCTCTTTaGACAACCGGAGCCAGGCTTGGGGCCTGGACTCGAGGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: AVTQFPHQRPGLGPL*TTGARLGAWTRGRL
Trigger: CAGGCGCCCTCGAGTCCAGGCCCCAAGCCTGGCTCCGGTTGTCCAAAGAGGGCCTAGGCCAGGCCTCTGGTGCGGAAACTGAGTCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CAA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCAACCGGAGCCAGGCTaGGGGCCTGGACTCGAGGGC +
Preference number: 5 (lower is better)
Translates to: GKEESVDAKVRCPDALRFQPEPG*GPGLEG
Trigger: GCCCTCGAGTCCAGGCCCCAAGCCTGGCTCCGGTTG...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CAA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCATCTCTACCCCTAACTTaGGCTCGTAAGCGTCTAGGC +
Preference number: 5 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAASLPLT*ARKRLG
Trigger: GCCTAGACGCTTACGAGCCAAAGTTAGGGGTAGAGA...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS GCA 90 bp TTTGGACAACCGGAGCCAGGCTTGGGGCCTGGACTCGAGGGCGCCTaGAGCTCCCTTCTGGGGACTTGTCTGAACCTGCTGAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: FGQPEPGLGPGLEGA*SSLLGTCLNLLRPC
Trigger: GCAGGGCCTCAGCAGGTTCAGACAAGTCCCCAGAAGGGAGCTGCAGGCGCCCTCGAGTCCAGGCCCCAAGCCTGGCTCCGGTTGTCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371141.8
ENST00000460655.5
CDS-3UTR CAA 90 bp GGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAGATGCCCCCAGTCCTaGGCAATGTGCCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: GAGQAPHTREIHTRGTHERCPQS*AMCLLP
Trigger: AGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCT...TTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCAAGCAGCAGATCTAACTaGGAACGTCTCAACCATGGG +
Preference number: 5 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAASSRSN*ERLNHG
Trigger: CCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGCT...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS TCA 90 bp CTTCTGGGGACTTGTCTGAACCTGCTGAGGCCCTGCCCGACCTCCTaGCCCCTTCCTTTCCTGGACGGCCTGGTCCTCCACTGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: LLGTCLNLLRPCPTS*PLPFLDGLVLHCQQ
Trigger: CTGCTGGCAGTGGAGGACCAGGCCGTCCAGGAAAGGAAGGGGTCAGGAGGTCGGGCAGGGCCTCAGCAGGTTCAGACAAGTCCCCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371141.8
ENST00000460655.5
CDS-3UTR CAA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGTCTCTACCCCTAACTTaGGCTCGTAAGCGTCTAGGC +
Preference number: 5 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRSLPLT*ARKRLG
Trigger: GCCTAGACGCTTACGAGCCAAAGTTAGGGGTAGAGA...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CAA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACACCCCAATCCAACCTaGGATCTACAAGCGTCTAAC +
Preference number: 5 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTHPNPT*DLQASN
Trigger: GTTAGACGCTTGTAGATCCAAGGTTGGATTGGGGTG...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCACATTCCCCGGACCGCTaGAGCAGGACTAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: GQAPHTREIHTRGTHENPHSPDR*SRTREG
Trigger: TCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATG...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CAA 90 bp GGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCTGGCCTAGGCCCTCTTaGGACAACCGGAGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: GKEESVDAKVRCPDALRFWPRPS*DNRSQA
Trigger: AGCCTGGCTCCGGTTGTCCAAAGAGGGCCTAGGCCA...GAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CAA 90 bp GGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGACACCCCAATCCAACCTaGGATCTACAAGCGTCTAAC +
Preference number: 5 (lower is better)
Translates to: GRRPSPSHPGDPHARHTRHPNPT*DLQASN
Trigger: GTTAGACGCTTGTAGATCCAAGGTTGGATTGGGGTG...TCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTCCTGCTTCCTGGGCATaGCTCAGTGGCAATGGAAGA +
Preference number: 5 (lower is better)
Translates to: VRCPDALRFLEAAPLRAAPASWA*LSGNGR
Trigger: TCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAGG...AGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCAAGCCCATGAGCTGTTaGGACAACTTCAATCTCTGG +
Preference number: 5 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGKPMSC*DNFNLW
Trigger: CCAGAGATTGAAGTTGTCCAAACAGCTCATGGGCTT...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CAGCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGAACAGAAGTCCGGTATaGCCACTGTGGACTGTTTTT +
Preference number: 5 (lower is better)
Translates to: QLAGRRPSPSHPGDPHARNRSPV*PLWTVF
Trigger: AAAAACAGTCCACAGTGGCAATACCGGACTTCTGTT...CCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACGAAAAATACAGTGGTTaGAGGACCCCAAGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: LAGRRPSPSHPGDPHARHEKYSG*RTPRSQ
Trigger: CTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTC...GTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS TCA 90 bp CGGTCATCAGCAAGCTCGTCCAGCTCTTGCTCGGCTAACAGCTCCTaGCCCCTTCCTTTCCTGGACGGCCTGGTCCTCCACTGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: RSSASSSSSCSANSS*PLPFLDGLVLHCQQ
Trigger: CTGCTGGCAGTGGAGGACCAGGCCGTCCAGGAAAGGAAGGGGTCAGGAGCTGTTAGCCGAGCAAGAGCTGGACGAGCTTGCTGATGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458280.5
CDS-3UTR CAA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGACATTCCCCGGACCGCTaGAGCAGGACTAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRHSPDR*SRTREG
Trigger: TCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATG...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CAA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCATTCCCCGGACCGCTaGAGCAGGACTAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLHSPDR*SRTREG
Trigger: TCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATG...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CAA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCAAGATGCCCCCAGTCCTaGGCAATGTGCCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: APHTREIHTRGTHENPMPRCPQS*AMCLLP
Trigger: AGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCT...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACATTTCCTAAGCAATGTTaGTCAGGGAATACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTFPKQC*SGNTRS
Trigger: GGACCTGGTATTCCCTGACAAACATTGCTTAGGAAA...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCTTTCCTAAGCAATGTTaGTCAGGGAATACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGFPKQC*SGNTRS
Trigger: GGACCTGGTATTCCCTGACAAACATTGCTTAGGAAA...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACAAACAGAAGTCCGGTATaGCCACTGTGGACTGTTTTT +
Preference number: 5 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTNRSPV*PLWTVF
Trigger: AAAAACAGTCCACAGTGGCAATACCGGACTTCTGTT...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CAGCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGTTTTACCCAAATGGGTaGAGGGAACAAAAACCAACC +
Preference number: 5 (lower is better)
Translates to: QLAGRRPSPSHPGDPHARFYPNG*REQKPT
Trigger: GGTTGGTTTTTGTTCCCTCAACCCATTTGGGTAAAA...CCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp TTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGTCTGTCTCTCCCACCTaGGGAAACCCAGCGCTAAAA +
Preference number: 5 (lower is better)
Translates to: FAAPTPSDSSRLHLCGQLSVSPT*GNPALK
Trigger: TTTTAGCGCTGGGTTTCCCAAGGTGGGAGAGACAGA...CAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTCCCTTCTGGGGACTaGTCTGAACCTGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: PDRLSRTREGGVRGCKGSLPSGD*SEPAEA
Trigger: GGCCTCAGCAGGTTCAGACAAGTCCCCAGAAGGGAG...CGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CAA 90 bp GCTGGCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCAAGAACTCAATCTCTATaGTGCAGCAGTATCAAAGGT +
Preference number: 5 (lower is better)
Translates to: AGGAQAKPLTPGRSTRAARTQSL*CSSIKG
Trigger: ACCTTTGATACTGCTGCACAATAGAGATTGAGTTCT...TGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGTATATAAGTAATGGATaGAGCAAGGATGGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: PDALRFLEAAPLRAAGGAYISNG*SKDGWG
Trigger: TCCCCAGCCATCCTTGCTCAATCCATTACTTATATA...CGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGAAGATGCCCCCAGTCCTaGGCAATGTGCCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LGKEESVDAKVRCPDALRRCPQS*AMCLLP
Trigger: AGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCT...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACATTTTACCCAAATGGGTaGAGGGAACAAAAACCAACC +
Preference number: 5 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTFYPNG*REQKPT
Trigger: GGTTGGTTTTTGTTCCCTCAACCCATTTGGGTAAAA...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GCGGGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACAAGAACTCAATCTCTATaGTGCAGCAGTATCAAAGGT +
Preference number: 5 (lower is better)
Translates to: AGRRPSPSHPGDPHARHTRTQSL*CSSIKG
Trigger: ACCTTTGATACTGCTGCACAATAGAGATTGAGTTCT...TGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGAGAACTCAATCTCTATaGTGCAGCAGTATCAAAGGT +
Preference number: 5 (lower is better)
Translates to: PDALRFLEAAPLRAAGGARTQSL*CSSIKG
Trigger: ACCTTTGATACTGCTGCACAATAGAGATTGAGTTCT...CGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp ACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCCCTGCTTCCTGGGCATaGCTCAGTGGCAATGGAAGA +
Preference number: 5 (lower is better)
Translates to: THSPDRLSRTREGGVRGCPASWA*LSGNGR
Trigger: TCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAGG...GCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCCTGCTTCCTGGGCATaGCTCAGTGGCAATGGAAGA +
Preference number: 5 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLPASWA*LSGNGR
Trigger: TCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAGG...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCCTGCTTCCTGGGCATaGCTCAGTGGCAATGGAAGA +
Preference number: 5 (lower is better)
Translates to: RSPWMQRFAAPTPSDSSRPASWA*LSGNGR
Trigger: TCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAGG...CCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTGCTTCCTGGGCATaGCTCAGTGGCAATGGAAGA +
Preference number: 5 (lower is better)
Translates to: SVDAKVRCPDALRFLEAAPASWA*LSGNGR
Trigger: TCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAGG...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAAGCAGCAGATCTAACTaGGAACGTCTCAACCATGGG +
Preference number: 5 (lower is better)
Translates to: GQAPHTREIHTRGTHENPSSRSN*ERLNHG
Trigger: CCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGCT...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCATCTGTCTCTCCCACCTaGGGAAACCCAGCGCTAAAA +
Preference number: 5 (lower is better)
Translates to: APHTREIHTRGTHENPMPSVSPT*GNPALK
Trigger: TTTTAGCGCTGGGTTTCCCAAGGTGGGAGAGACAGA...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCTCTGTCTCTCCCACCTaGGGAAACCCAGCGCTAAAA +
Preference number: 5 (lower is better)
Translates to: VRGCKGSLPRRPQIPRGCSVSPT*GNPALK
Trigger: TTTTAGCGCTGGGTTTCCCAAGGTGGGAGAGACAGA...GCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS TCA 90 bp CGTCCAGCTCCGCAGCAATGCTACGTGAATGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCTCGGCTAACAGCTGCTGAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: RPAPQQCYVNAEGWR*CDYSLARLTAAEAL
Trigger: CAGGGCCTCAGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGCTGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359617.8
CDS-3UTR CAA 90 bp GTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCTCAGTCATTCCCCGGACCGCTaGAGCAGGACTAGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: VKMPPVLGNVPASWALLSHSPDR*SRTREG
Trigger: TCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATG...ACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AAAACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGAAGATGCCCCCAGTCCTaGGCAATGTGCCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: KTHSPDRLSRTREGGVRGRCPQS*AMCLLP
Trigger: AGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCT...TCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GGGCGCAGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAGCACTTTAAAAAGCTaGAACAGAAGTCCGGTATTG +
Preference number: 5 (lower is better)
Translates to: GRRPSPSHPGDPHARHTRSTLKS*NRSPVL
Trigger: CAATACCGGACTTCTGTTCAAGCTTTTTAAAGTGCT...TCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCTGCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp ACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGAGCACTTTAAAAAGCTaGAACAGAAGTCCGGTATTG +
Preference number: 5 (lower is better)
Translates to: TPSDSSRLHLCGQLAGRRSTLKS*NRSPVL
Trigger: CAATACCGGACTTCTGTTCAAGCTTTTTAAAGTGCT...CCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGAAAAATACAGTGGTTaGAGGACCCCAAGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: VRCPDALRFLEAAPLRAAEKYSG*RTPRSQ
Trigger: CTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTC...AGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGGAAAAATACAGTGGTTaGAGGACCCCAAGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: RFAAPTPSDSSRLHLCGQEKYSG*RTPRSQ
Trigger: CTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTC...CTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGCAGGCTTTTCAGTTACAATCTaGGGAAAGATCAGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: RPQIPRGCTSAGSWRGAGFSVTI*GKIRSF
Trigger: AAAGCTCCTGATCTTTCCCAAGATTGTAACTGAAAA...GCCTGCGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGCTGGCGGGGCGTTTTCAGTTACAATCTaGGGAAAGATCAGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: PDALRFLEAAPLRAAGGAFSVTI*GKIRSF
Trigger: AAAGCTCCTGATCTTTCCCAAGATTGTAACTGAAAA...CGCCCCGCCAGCTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGCAACCGGAGCCAGGCTaGGGGCCTGGACTCGAGGGC +
Preference number: 5 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMQPEPG*GPGLEG
Trigger: GCCCTCGAGTCCAGGCCCCAAGCCTGGCTCCGGTTG...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS-3UTR CAA 90 bp GGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGACACCCCAATCCAACCTaGGATCTACAAGCGTCTAAC +
Preference number: 5 (lower is better)
Translates to: GGVRGCKGSLPRRPQIPRHPNPT*DLQASN
Trigger: GTTAGACGCTTGTAGATCCAAGGTTGGATTGGGGTG...TCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCTTTCCTAAGCAATGTTaGTCAGGGAATACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPFPKQC*SGNTRS
Trigger: GGACCTGGTATTCCCTGACAAACATTGCTTAGGAAA...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCAGCAGCAGATCTAACTaGGAACGTCTCAACCATGGG +
Preference number: 5 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCSSRSN*ERLNHG
Trigger: CCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGCT...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGTCTGTCTCTCCCACCTaGGGAAACCCAGCGCTAAAA +
Preference number: 5 (lower is better)
Translates to: PDRLSRTREGGVRGCKGSSVSPT*GNPALK
Trigger: TTTTAGCGCTGGGTTTCCCAAGGTGGGAGAGACAGA...CGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCGAAAAATACAGTGGTTaGAGGACCCCAAGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPEKYSG*RTPRSQ
Trigger: CTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTC...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS TCA 90 bp CATACGGTCATCAGCAAGCTCGTCCAGCTCCGCAGCAATGCTACGTaGATGCAGAGGGCTGGAGGTGATGTGACTACTCACTTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: HTVISKLVQLRSNAT*MQRAGGDVTTHLLG
Trigger: GCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGCTGGACGAGCTTGCTGATGACCGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359617.8
ENST00000371141.8
ENST00000493301.5
CDS TCA 90 bp CAGCAAGCTACGCAGCAATGCTACGTGAATGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCTCGGCTAACAGCTGCTGAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: QQATQQCYVNAEGWR*CDYSLARLTAAEAL
Trigger: CAGGGCCTCAGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGTAGCTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361830.7
CDS TCA 90 bp CGTCCAGCTCCGCAGCAATGCTACGTGAATGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCTCGGCTAACAGCTGCCGGTTTTGGA +
Preference number: 5 (lower is better)
Translates to: RPAPQQCYVNAEGWR*CDYSLARLTAAGFG
Trigger: TCCAAAACCGGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGCTGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371141.8
ENST00000493301.5
CDS CCA 90 bp TGCGTAGCGATCCAACGTCCCAGAGACCCCACCCCAATCCAACCTTaGATCTACAAGCGTCTAACTCGCCAATCCGGCTCTAGACTGGGA +
Preference number: 5 (lower is better)
Translates to: CVAIQRPRDPTPIQP*IYKRLTRQSGSRLG
Trigger: TCCCAGTCTAGAGCCGGATTGGCGAGTTAGACGCTTGTAGATCCAAGGTTGGATTGGGGTGGGGTCTCTGGGACGTTGGATCGCTACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCATATATAAGTAATGGATaGAGCAAGGATGGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: GQAPHTREIHTRGTHENPYISNG*SKDGWG
Trigger: TCCCCAGCCATCCTTGCTCAATCCATTACTTATATA...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGAAGCCCATGAGCTGTTaGGACAACTTCAATCTCTGG +
Preference number: 5 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLKPMSC*DNFNLW
Trigger: CCAGAGATTGAAGTTGTCCAAACAGCTCATGGGCTT...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp TGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCAAGCCCATGAGCTGTTaGGACAACTTCAATCTCTGG +
Preference number: 5 (lower is better)
Translates to: WMQRFAAPTPSDSSRLHLKPMSC*DNFNLW
Trigger: CCAGAGATTGAAGTTGTCCAAACAGCTCATGGGCTT...GAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCATTTCCTAAGCAATGTTaGTCAGGGAATACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: APHTREIHTRGTHENPMPFPKQC*SGNTRS
Trigger: GGACCTGGTATTCCCTGACAAACATTGCTTAGGAAA...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGAGCAGCAGATCTAACTaGGAACGTCTCAACCATGGG +
Preference number: 5 (lower is better)
Translates to: PDRLSRTREGGVRGCKGSSSRSN*ERLNHG
Trigger: CCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGCT...CGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCAACAGAAGTCCGGTATaGCCACTGTGGACTGTTTTT +
Preference number: 5 (lower is better)
Translates to: VRGCKGSLPRRPQIPRGCNRSPV*PLWTVF
Trigger: AAAAACAGTCCACAGTGGCAATACCGGACTTCTGTT...GCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AAAACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATCTGTCTCTCCCACCTaGGGAAACCCAGCGCTAAAA +
Preference number: 5 (lower is better)
Translates to: KTHSPDRLSRTREGGVRGSVSPT*GNPALK
Trigger: TTTTAGCGCTGGGTTTCCCAAGGTGGGAGAGACAGA...TCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AGGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAAACCATCTTCAGTTTaGATACAGGACTGTTCAACG +
Preference number: 5 (lower is better)
Translates to: RPSPSHPGDPHARHTRKPKPSSV*IQDCST
Trigger: CGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTT...GGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CAA 90 bp GGCCAAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAAGAACTCAATCTCTATaGTGCAGCAGTATCAAAGGT +
Preference number: 5 (lower is better)
Translates to: GQAPHTREIHTRGTHENPRTQSL*CSSIKG
Trigger: ACCTTTGATACTGCTGCACAATAGAGATTGAGTTCT...TGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTATATAAGTAATGGATaGAGCAAGGATGGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: GVRGCKGSLPRRPQIPRGYISNG*SKDGWG
Trigger: TCCCCAGCCATCCTTGCTCAATCCATTACTTATATA...GCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACCCTGCTTCCTGGGCATaGCTCAGTGGCAATGGAAGA +
Preference number: 5 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNPASWA*LSGNGR
Trigger: TCTTCCATTGCCACTGAGCAATGCCCAGGAAGCAGG...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCTTTCCTAAGCAATGTTaGTCAGGGAATACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCFPKQC*SGNTRS
Trigger: GGACCTGGTATTCCCTGACAAACATTGCTTAGGAAA...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp ATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCAACAGAAGTCCGGTATaGCCACTGTGGACTGTTTTT +
Preference number: 5 (lower is better)
Translates to: MQRFAAPTPSDSSRLHLCNRSPV*PLWTVF
Trigger: AAAAACAGTCCACAGTGGCAATACCGGACTTCTGTT...GCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCAAACAGAAGTCCGGTATaGCCACTGTGGACTGTTTTT +
Preference number: 5 (lower is better)
Translates to: SVDAKVRCPDALRFLEAANRSPV*PLWTVF
Trigger: AAAAACAGTCCACAGTGGCAATACCGGACTTCTGTT...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCCATTTTACCCAAATGGGTaGAGGGAACAAAAACCAACC +
Preference number: 5 (lower is better)
Translates to: APHTREIHTRGTHENPMPFYPNG*REQKPT
Trigger: GGTTGGTTTTTGTTCCCTCAACCCATTTGGGTAAAA...TGGCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AAGCCCCTCACACCCGGGAGATCCACACGCGCGGCACACACGAAAACCCAATGCGAAAAATACAGTGGTTaGAGGACCCCAAGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: KPLTPGRSTRAAHTKTQCEKYSG*RTPRSQ
Trigger: CTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTC...GCATTGGGTTTTCGTGTGTGCCGCGCGTGTGGATCTCCCGGGTGTGAGGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGCGGGCAGTTTTCAGTTACAATCTaGGGAAAGATCAGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: RFAAPTPSDSSRLHLCGQFSVTI*GKIRSF
Trigger: AAAGCTCCTGATCTTTCCCAAGATTGTAACTGAAAA...CTGCCCGCAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS TCA 90 bp GCAAGCGCAGCAATGCTACGTGAATGCAGAGGGCTGGAGGTGATGTaGCTACTCACTTGCTCGGCTAACAGCTGCCGGTTTTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: ASAAMLRECRGLEVM*LLTCSANSCRFWME
Trigger: TTCCATCCAAAACCGGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358029.8
ENST00000496003.5
CDS TCA 90 bp CATCAGCAAGCGCAGCAATGCTACGTGAATGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCTCGGCTAACAGCTGCCGGTTTTGGA +
Preference number: 5 (lower is better)
Translates to: HQQAQQCYVNAEGWR*CDYSLARLTAAGFG
Trigger: TCCAAAACCGGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGCTTGCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358029.8
ENST00000496003.5
CDS TCA 90 bp AGCTCCGCAGCAATGCTACGTGAATGCAGAGGGCTGGAGGTGATGTaGCTACTCACTTGCTCGGCTAACAGCTGCCGGTTTTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: SSAAMLRECRGLEVM*LLTCSANSCRFWME
Trigger: TTCCATCCAAAACCGGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371141.8
ENST00000493301.5
CDS-3UTR CAA 90 bp ATCTCTTGGGTAGTTATCTCAATGGCATGTTCCTCTTCGCTGCTGTCATCCAGGTGGCCTAGGCCCTCTTaGGACAACCGGAGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: ISWVVISMACSSSLLSSRWPRPS*DNRSQA
Trigger: AGCCTGGCTCCGGTTGTCCAAAGAGGGCCTAGGCCA...CCTGGATGACAGCAGCGAAGAGGAACATGCCATTGAGATAACTACCCAAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR CAA 90 bp GGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAAACCATCTTCAGTTTaGATACAGGACTGTTCAACG +
Preference number: 5 (lower is better)
Translates to: GLGKEESVDAKVRCPDALKPSSV*IQDCST
Trigger: CGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTT...GAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CAA 90 bp GATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCTGTATATAAGTAATGGATaGAGCAAGGATGGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: DAKVRCPDALRFLEAAPLYISNG*SKDGWG
Trigger: TCCCCAGCCATCCTTGCTCAATCCATTACTTATATA...CAGAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AAAACCCATTCCCCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGAAAGCCCATGAGCTGTTaGGACAACTTCAATCTCTGG +
Preference number: 5 (lower is better)
Translates to: KTHSPDRLSRTREGGVRGKPMSC*DNFNLW
Trigger: CCAGAGATTGAAGTTGTCCAAACAGCTCATGGGCTT...TCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGGGGAATGGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTTTACCCAAATGGGTaGAGGGAACAAAAACCAACC +
Preference number: 5 (lower is better)
Translates to: LGKEESVDAKVRCPDALRFYPNG*REQKPT
Trigger: GGTTGGTTTTTGTTCCCTCAACCCATTTGGGTAAAA...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGTTTTACCCAAATGGGTaGAGGGAACAAAAACCAACC +
Preference number: 5 (lower is better)
Translates to: RSPWMQRFAAPTPSDSSRFYPNG*REQKPT
Trigger: GGTTGGTTTTTGTTCCCTCAACCCATTTGGGTAAAA...CCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACTCTGTCTCTCCCACCTaGGGAAACCCAGCGCTAAAA +
Preference number: 5 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNSVSPT*GNPALK
Trigger: TTTTAGCGCTGGGTTTCCCAAGGTGGGAGAGACAGA...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS CCA 90 bp CCACTTATATTCCTGATTTATTCACTTTCTTTCTCGTGGCCCGGCTaGCCCACCCTTTCACGGAAGCTTCTCGACAAGGCCTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: PLIFLIYSLSFSWPG*PTLSRKLLDKASGL
Trigger: GAGGCCTGAGGCCTTGTCGAGAAGCTTCCGTGAAAGGGTGGGCCAGCCGGGCCACGAGAAAGAAAGTGAATAAATCAGGAATATAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
ENST00000467096.5
ENST00000496003.5
CDS-3UTR CAA 90 bp TCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCAAAACCATCTTCAGTTTaGATACAGGACTGTTCAACG +
Preference number: 5 (lower is better)
Translates to: SVDAKVRCPDALRFLEAAKPSSV*IQDCST
Trigger: CGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTT...TGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CAA 90 bp CTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGAAAACCATCTTCAGTTTaGATACAGGACTGTTCAACG +
Preference number: 5 (lower is better)
Translates to: LGKEESVDAKVRCPDALRKPSSV*IQDCST
Trigger: CGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTT...TCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CAA 90 bp TGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGCTGCACCTCAAACCATCTTCAGTTTaGATACAGGACTGTTCAACG +
Preference number: 5 (lower is better)
Translates to: WMQRFAAPTPSDSSRLHLKPSSV*IQDCST
Trigger: CGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTT...GAGGTGCAGCCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
CDS-3UTR CAA 90 bp AGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTCAGATTCCTCGAGGAGCACTTTAAAAAGCTaGAACAGAAGTCCGGTATTG +
Preference number: 5 (lower is better)
Translates to: RSPWMQRFAAPTPSDSSRSTLKS*NRSPVL
Trigger: CAATACCGGACTTCTGTTCAAGCTTTTTAAAGTGCT...CCTCGAGGAATCTGAGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTAGCACTTTAAAAAGCTaGAACAGAAGTCCGGTATTG +
Preference number: 5 (lower is better)
Translates to: RTREGGVRGCKGSLPRRPSTLKS*NRSPVL
Trigger: CAATACCGGACTTCTGTTCAAGCTTTTTAAAGTGCT...AGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS CCA 90 bp CAAGCTCGTCCAGCTCTTGCTCGGCTAACAGCTGCCGGTTTTGGATaGAATTATTCCGCAACAACAAGAAAGCGTCGGTTAAACGCCTGG +
Preference number: 5 (lower is better)
Translates to: QARPALARLTAAGFG*NYSATTRKRRLNAW
Trigger: CCAGGCGTTTAACCGACGCTTTCTTGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCAAGAGCTGGACGAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000464640.5
ENST00000467096.5
CDS-3UTR CAA 90 bp AGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGCTGCCCCGACGCCCTTTTTCAGTTACAATCTaGGGAAAGATCAGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: RTREGGVRGCKGSLPRRPFSVTI*GKIRSF
Trigger: AAAGCTCCTGATCTTTCCCAAGATTGTAACTGAAAA...AGGGCGTCGGGGCAGCGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS GCA 90 bp ATACGGTCATCAGCAAGCTCGTCCAGCTCTTGCTCGGCTAACAGCTaGCGGTTTTGGATGGAATTATTCCGCAACAACAAGAAAGCGTCG +
Preference number: 5 (lower is better)
Translates to: IRSSASSSSSCSANS*RFWMELFRNNKKAS
Trigger: CGACGCTTTCTTGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCAAGAGCTGGACGAGCTTGCTGATGACCGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000464640.5
ENST00000467096.5
CDS CCA 90 bp TCAGCAAGCTCGTCCAGCTCTTGCTCGGCTAACAGCTGCCGGTTTTaGATGGAATTATTCCGCAACAACAAGAAAGCGTCGGTTAAACGC +
Preference number: 5 (lower is better)
Translates to: SASSSSSCSANSCRF*MELFRNNKKASVKR
Trigger: GCGTTTAACCGACGCTTTCTTGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCAAGAGCTGGACGAGCTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000464640.5
ENST00000467096.5
CDS-3UTR CAA 90 bp TTTCCTCTCGATTCTTCATGCCTGAGTGATCTCTTGGGTAGTTATCTCAATGGCCTCCCTTCTGGGGACTaGTCTGAACCTGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: FPLDSSCLSDLLGSYLNGLPSGD*SEPAEA
Trigger: GGCCTCAGCAGGTTCAGACAAGTCCCCAGAAGGGAG...GCCATTGAGATAACTACCCAAGAGATCACTCAGGCATGAAGAATCGAGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS-3UTR CAA 90 bp CCGGACCGCTTGAGCAGGACTAGGGAAGGAGGAGTCCGTGGATGCAAAGGTTCGTTTTCAGTTACAATCTaGGGAAAGATCAGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: PDRLSRTREGGVRGCKGSFSVTI*GKIRSF
Trigger: AAAGCTCCTGATCTTTCCCAAGATTGTAACTGAAAA...CGAACCTTTGCATCCACGGACTCCTCCTTCCCTAGTCCTGCTCAAGCGGTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS GCA 90 bp ATCTGGCGAATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTaGTCCACCAGAACTAACTGGTCCTCCGATGGTAAAGAGTGTTAT +
Preference number: 5 (lower is better)
Translates to: IWRISRSRSSTISVF*STRTNWSSDGKECY
Trigger: ATAACACTCTTTACCATCGGAGGACCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGATTCGCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464640.5
CDS CCA 90 bp TACGGTCATCAGCAAGTTGCTCGGCTAACAGCTGCCGGTTTTGGATaGAATTATTCCGCAACAACAAGAAAGCGTCGGTTAAACGCCTGG +
Preference number: 5 (lower is better)
Translates to: YGHQQVARLTAAGFG*NYSATTRKRRLNAW
Trigger: CCAGGCGTTTAACCGACGCTTTCTTGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCAACTTGCTGATGACCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371132.8
CDS CCA 90 bp GCCATACGGTCATCAGCAAGTTGCTCGGCTAACAGCTGCCGGTTTTaGATGGAATTATTCCGCAACAACAAGAAAGCGTCGGTTAAACGC +
Preference number: 5 (lower is better)
Translates to: AIRSSASCSANSCRF*MELFRNNKKASVKR
Trigger: GCGTTTAACCGACGCTTTCTTGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCAACTTGCTGATGACCGTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371132.8
CDS-3UTR CAA 90 bp GTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGCTCAGTAAACCATCTTCAGTTTaGATACAGGACTGTTCAACG +
Preference number: 5 (lower is better)
Translates to: VKMPPVLGNVPASWALLSKPSSV*IQDCST
Trigger: CGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTT...ACTGAGCAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp TTCCTAGTCAAGATGCCCCCAGTCCTTGGCAATGTGCCTGCTTCCTGGGCATTGTATATAAGTAATGGATaGAGCAAGGATGGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: FLVKMPPVLGNVPASWALYISNG*SKDGWG
Trigger: TCCCCAGCCATCCTTGCTCAATCCATTACTTATATA...CAATGCCCAGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCTTGACTAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp ATGGCTGGGGATACCCATGGGGACACACTGGCTGAGTCTGGTGGCTTTCATAACAAACCATCTTCAGTTTaGATACAGGACTGTTCAACG +
Preference number: 5 (lower is better)
Translates to: MAGDTHGDTLAESGGFHNKPSSV*IQDCST
Trigger: CGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTT...GTTATGAAAGCCACCAGACTCAGCCAGTGTGTCCCCATGGGTATCCCCAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCAGCAGCAGATCTAACTaGGAACGTCTCAACCATGGG +
Preference number: 5 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSSSRSN*ERLNHG
Trigger: CCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGCT...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGGAAAAATACAGTGGTTaGAGGACCCCAAGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMEKYSG*RTPRSQ
Trigger: CTGACTTCTTGGGGTCCTCAAACCACTGTATTTTTC...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CCCTCTTTCCTAAGCAATGTTTGTCAGGGAATACCAGGTCCGCTTCCTGAAATGTTTTACCCAAATGGGTaGAGGGAACAAAAACCAACC +
Preference number: 5 (lower is better)
Translates to: PSFLSNVCQGIPGPLPEMFYPNG*REQKPT
Trigger: GGTTGGTTTTTGTTCCCTCAACCCATTTGGGTAAAA...CATTTCAGGAAGCGGACCTGGTATTCCCTGACAAACATTGCTTAGGAAAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGAGATGCCCCCAGTCCTaGGCAATGTGCCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMRCPQS*AMCLLP
Trigger: AGGAAGCAGGCACATTGCCAAGGACTGGGGGCATCT...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp ACACTGGCTGAGTCTGGTGGCTTTCATAACACTGTCAAGCTTTCTTTTAATGTGAAGCCCATGAGCTGTTaGGACAACTTCAATCTCTGG +
Preference number: 5 (lower is better)
Translates to: TLAESGGFHNTVKLSFNVKPMSC*DNFNLW
Trigger: CCAGAGATTGAAGTTGTCCAAACAGCTCATGGGCTT...CACATTAAAAGAAAGCTTGACAGTGTTATGAAAGCCACCAGACTCAGCCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp ATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTCGTTCCCGCAAACCATCTTCAGTTTaGATACAGGACTGTTCAACG +
Preference number: 5 (lower is better)
Translates to: ISFRSEMDCTIWRISRSRKPSSV*IQDCST
Trigger: CGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTT...GCGGGAACGAGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR CAA 90 bp CTTGGGAAAGATCAGGAGCTTTGGAAAACGCGTGGTAAACATGTCTGTTTCTCCAGAACTCAATCTCTATaGTGCAGCAGTATCAAAGGT +
Preference number: 5 (lower is better)
Translates to: LGKDQELWKTRGKHVCFSRTQSL*CSSIKG
Trigger: ACCTTTGATACTGCTGCACAATAGAGATTGAGTTCT...GGAGAAACAGACATGTTTACCACGCGTTTTCCAAAGCTCCTGATCTTTCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp AGGACTGTACCCTGTTCTACAATCATCGCCCCTAAGTCCCTGAATATTTCATTCAAACCATCTTCAGTTTaGATACAGGACTGTTCAACG +
Preference number: 5 (lower is better)
Translates to: RTVPCSTIIAPKSLNISFKPSSV*IQDCST
Trigger: CGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTT...GAATGAAATATTCAGGGACTTAGGGGCGATGATTGTAGAACAGGGTACAGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR CAA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCAGCAGCAGATCTAACTaGGAACGTCTCAACCATGGG +
Preference number: 5 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMASSRSN*ERLNHG
Trigger: CCCATGGTTGAGACGTTCCAAGTTAGATCTGCTGCT...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp TCTTCCACCATCAGTGTGTTCTGCTCCACCAGAACTAACTGGTCCTCTGTAAAACTGCTAGGATTTGGATaGTTTTCCTATCTTTTCATG +
Preference number: 5 (lower is better)
Translates to: SSTISVFCSTRTNWSSVKLLGFG*FSYLFM
Trigger: CATGAAAAGATAGGAAAACAATCCAAATCCTAGCAG...TTTTACAGAGGACCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476384.5
CDS-3UTR CAA 90 bp GTTAATAATTTGAGATCCACTAATCCTAAATGGGGTGACCCATTTAAAATGGCCAAGCCCATGAGCTGTTaGGACAACTTCAATCTCTGG +
Preference number: 5 (lower is better)
Translates to: VNNLRSTNPKWGDPFKMAKPMSC*DNFNLW
Trigger: CCAGAGATTGAAGTTGTCCAAACAGCTCATGGGCTT...GGCCATTTTAAATGGGTCACCCCATTTAGGATTAGTGGATCTCAAATTATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp ACACTGGCTGAGTCTGGTGGCTTTCATAACACTGTCAAGCTTTCTTTTAATGTGAGCACTTTAAAAAGCTaGAACAGAAGTCCGGTATTG +
Preference number: 5 (lower is better)
Translates to: TLAESGGFHNTVKLSFNVSTLKS*NRSPVL
Trigger: CAATACCGGACTTCTGTTCAAGCTTTTTAAAGTGCT...CACATTAAAAGAAAGCTTGACAGTGTTATGAAAGCCACCAGACTCAGCCAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp GATACAGGACTGTTCAACGTTATAGTCAATTCTGTCAAGGACTGTACCCTGTTCCAGCTCTTAATTTCCTaGGACATACTTCAGAACGTA +
Preference number: 5 (lower is better)
Translates to: DTGLFNVIVNSVKDCTLFQLLIS*DILQNV
Trigger: TACGTTCTGAAGTATGTCCAAGGAAATTAAGAGCTG...GAACAGGGTACAGTCCTTGACAGAATTGACTATAACGTTGAACAGTCCTGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476384.5
CDS-3UTR CAA 90 bp TCCCTGAATATTTCATTCAGGTCAGAAATGGACTGTACAATCTGGCGAATCTCTAAACCATCTTCAGTTTaGATACAGGACTGTTCAACG +
Preference number: 5 (lower is better)
Translates to: SLNISFRSEMDCTIWRISKPSSV*IQDCST
Trigger: CGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTT...AGAGATTCGCCAGATTGTACAGTCCATTTCTGACCTGAATGAAATATTCAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR CAA 90 bp TCTCAATTAGCAGAGAAAACAGTGAATCCGTTAAATCAGAGACACACATCACTTAACAGAAGTCCGGTATaGCCACTGTGGACTGTTTTT +
Preference number: 5 (lower is better)
Translates to: SQLAEKTVNPLNQRHTSLNRSPV*PLWTVF
Trigger: AAAAACAGTCCACAGTGGCAATACCGGACTTCTGTT...AAGTGATGTGTGTCTCTGATTTAACGGATTCACTGTTTTCTCTGCTAATTGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CCAGAACTCAATCTCTATTGTGCAGCAGTATCAAAGGTCCTTAAATTCTCAACAAGAACTCAATCTCTATaGTGCAGCAGTATCAAAGGT +
Preference number: 5 (lower is better)
Translates to: PELNLYCAAVSKVLKFSTRTQSL*CSSIKG
Trigger: ACCTTTGATACTGCTGCACAATAGAGATTGAGTTCT...TGTTGAGAATTTAAGGACCTTTGATACTGCTGCACAATAGAGATTGAGTTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS-3UTR CAA 90 bp CAAACCATCTTCAGTTTTGATACAGGACTGTTCAACGTTATAGTCAATTCTGTCAAACCATCTTCAGTTTaGATACAGGACTGTTCAACG +
Preference number: 5 (lower is better)
Translates to: QTIFSFDTGLFNVIVNSVKPSSV*IQDCST
Trigger: CGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTT...GACAGAATTGACTATAACGTTGAACAGTCCTGTATCAAAACTGAAGATGGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464640.5
ENST00000467096.5
ENST00000476384.5
ENST00000483434.5
CDS-3UTR CAA 90 bp GCAATGGAAGAGCCAATAAATCAAATCGCTGGTGGAATATTTTACTTTGAAATGTTTTCAGTTACAATCTaGGGAAAGATCAGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: AMEEPINQIAGGIFYFEMFSVTI*GKIRSF
Trigger: AAAGCTCCTGATCTTTCCCAAGATTGTAACTGAAAA...CATTTCAAAGTAAAATATTCCACCAGCGATTTGATTTATTGGCTCTTCCATTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
CDS CAA 90 bp GGCTGTGACTCAGTTTCCGCACCAGAGGCCTGGCCTAGGCCCTCTTaGGACAACCGGAGCCAGGCTTGGGGCCTGGACTCGAGGGCGCCT +
Preference number: 6 (lower is better)
Translates to: GCDSVSAPEAWPRPS*DNRSQAWGLDSRAP
Trigger: AGGCGCCCTCGAGTCCAGGCCCCAAGCCTGGCTCCGGTTGTCCAAAGAGGGCCTAGGCCAGGCCTCTGGTGCGGAAACTGAGTCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS CAA 90 bp CCAGCTCTTGCTCGGCTAACAGCAGAGGCCTGGCCTAGGCCCTCTTaGGACAACCGGAGCCAGGCTTGGGGCCTGGACTCGAGGGCGCCT +
Preference number: 6 (lower is better)
Translates to: PALARLTAEAWPRPS*DNRSQAWGLDSRAP
Trigger: AGGCGCCCTCGAGTCCAGGCCCCAAGCCTGGCTCCGGTTGTCCAAAGAGGGCCTAGGCCAGGCCTCTGCTGTTAGCCGAGCAAGAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460655.5
CDS CAA 72 bp TGGACTCGAGGGCGCCTGCAGCTCCCTTCTGGGGACTaGTCTGAACCTGCTGAGGCCCTGCCCGACCTCCTG +
Preference number: 6 (lower is better)
Translates to: WTRGRLQLPSGD*SEPAEALPDLL
Trigger: CAGGAGGTCGGGCAGGGCCTCAGCAGGTTCAGACAAGTCCCCAGAAGGGAGCTGCAGGCGCCCTCGAGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000371141.8
ENST00000460655.5
CDS CCA 72 bp CAGTTTCCGCACCAGAGGCCTGGCCTAGGCCCTCTTTaGACAACCGGAGCCAGGCTTGGGGCCTGGACTCGA +
Preference number: 6 (lower is better)
Translates to: QFPHQRPGLGPL*TTGARLGAWTR
Trigger: TCGAGTCCAGGCCCCAAGCCTGGCTCCGGTTGTCCAAAGAGGGCCTAGGCCAGGCCTCTGGTGCGGAAACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355957.9
ENST00000371141.8
CDS TCA 72 bp GCAAGCTCGTCCAGCTCTTGCTCGGCTAACAGCTCCTaGCCCCTTCCTTTCCTGGACGGCCTGGTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: ASSSSSCSANSS*PLPFLDGLVLH
Trigger: GTGGAGGACCAGGCCGTCCAGGAAAGGAAGGGGTCAGGAGCTGTTAGCCGAGCAAGAGCTGGACGAGCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458280.5
CDS TCA 72 bp ATACGGTCATCAGCAAGTTGCTCGGCTAACAGCTCCTaGCCCCTTCCTTTCCTGGACGGCCTGGTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: IRSSASCSANSS*PLPFLDGLVLH
Trigger: GTGGAGGACCAGGCCGTCCAGGAAAGGAAGGGGTCAGGAGCTGTTAGCCGAGCAACTTGCTGATGACCGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312283.12
CDS GCA 72 bp CTTCTCGACAAGGCCTCAGGCCTCAAGCCAAAAAGATaGAGCTGTGCGCTTCGCCAAGGCGTAGAGACCCCT +
Preference number: 6 (lower is better)
Translates to: LLDKASGLKPKR*SCALRQGVETP
Trigger: AGGGGTCTCTACGCCTTGGCGAAGCGCACAGCTGCATCTTTTTGGCTTGAGGCCTGAGGCCTTGTCGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355957.9
ENST00000371132.8
ENST00000371141.8
ENST00000496003.5
CDS GCA 72 bp AGTGCCATACGGTCATCAGCAAGCTCGTCCAGCTCTTaGTCGGCTAACAGCCCTTCCTTTCCTGGACGGCCT +
Preference number: 6 (lower is better)
Translates to: SAIRSSASSSSS*SANSPSFPGRP
Trigger: AGGCCGTCCAGGAAAGGAAGGGCTGTTAGCCGAGCAAGAGCTGGACGAGCTTGCTGATGACCGTATGGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496117.5
CDS TCA 72 bp GCGCAGCAATGCTACGTGAATGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCTCGGCTAACAGCTGCC +
Preference number: 6 (lower is better)
Translates to: AQQCYVNAEGWR*CDYSLARLTAA
Trigger: GGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358029.8
ENST00000496003.5
CDS TCA 72 bp CCGCAGCAATGCTACGTGAATGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCTCGGCTAACAGCTGCC +
Preference number: 6 (lower is better)
Translates to: PQQCYVNAEGWR*CDYSLARLTAA
Trigger: GGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371141.8
ENST00000493301.5
CDS TCA 72 bp CCGCAGCAATGCTACGTGAATGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCTCGGCTAACAGCTGCT +
Preference number: 6 (lower is better)
Translates to: PQQCYVNAEGWR*CDYSLARLTAA
Trigger: AGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359617.8
CDS TCA 72 bp ATCAGCAAGCTCGTCCAGCTCCGCAGCAATGCTACGTaGATGCAGAGGGCTGGAGGTGATGTGACTACTCAC +
Preference number: 6 (lower is better)
Translates to: ISKLVQLRSNAT*MQRAGGDVTTH
Trigger: GTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGGAGCTGGACGAGCTTGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359617.8
ENST00000371141.8
ENST00000493301.5
CDS TCA 72 bp TCTTTCCTCTCGATTCTTCATGCGTTTGAGGTAGCCTaGCTGTGCGTGCCGGAAGCTGGTGGAGAGTTCCTG +
Preference number: 6 (lower is better)
Translates to: SFLSILHAFEVA*LCVPEAGGEFL
Trigger: CAGGAACTCTCCACCAGCTTCCGGCACGCACAGTCAGGCTACCTCAAACGCATGAAGAATCGAGAGGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000312283.12
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000438253.1
ENST00000464640.5
ENST00000468590.1
CDS TCA 72 bp ACGCAGCAATGCTACGTGAATGCAGAGGGCTGGAGGTaGTGTGACTACTCACTTGCTCGGCTAACAGCTGCT +
Preference number: 6 (lower is better)
Translates to: TQQCYVNAEGWR*CDYSLARLTAA
Trigger: AGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361830.7
CDS TCA 72 bp GCAATGCTACGTGAATGCAGAGGGCTGGAGGTGATGTaGCTACTCACTTGCTCGGCTAACAGCTGCCGGTTT +
Preference number: 6 (lower is better)
Translates to: AMLRECRGLEVM*LLTCSANSCRF
Trigger: AAACCGGCAGCTGTTAGCCGAGCAAGTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358029.8
ENST00000371141.8
ENST00000493301.5
ENST00000496003.5
CDS TCA 72 bp TGCCATACGGTCATCAGCAAGCGCAGCAATGCTACGTaGATGCAGAGGGCTGGAGGTGATGTGACTACTCAC +
Preference number: 6 (lower is better)
Translates to: CHTVISKRSNAT*MQRAGGDVTTH
Trigger: GTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGCTTGCTGATGACCGTATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358029.8
ENST00000496003.5
CDS CCA 72 bp TTCCTGATTTATTCACTTTCTTTCTCGTGGCCCGGCTaGCCCACCCTTTCACGGAAGCTTCTCGACAAGGCC +
Preference number: 6 (lower is better)
Translates to: FLIYSLSFSWPG*PTLSRKLLDKA
Trigger: GGCCTTGTCGAGAAGCTTCCGTGAAAGGGTGGGCCAGCCGGGCCACGAGAAAGAAAGTGAATAAATCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
ENST00000467096.5
ENST00000496003.5
CDS TCA 72 bp CATACGGTCATCAGCAAGCTACGCAGCAATGCTACGTaGATGCAGAGGGCTGGAGGTGATGTGACTACTCAC +
Preference number: 6 (lower is better)
Translates to: HTVISKLRSNAT*MQRAGGDVTTH
Trigger: GTGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCGTAGCTTGCTGATGACCGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361830.7
CDS GCA 72 bp ATCTCTCGTTCCCGCTCTTCCACCATCAGTGTGTTCTaGTCCACCAGAACTAACTGGTCCTCCGATGGTAAA +
Preference number: 6 (lower is better)
Translates to: ISRSRSSTISVF*STRTNWSSDGK
Trigger: TTTACCATCGGAGGACCAGTTAGTTCTGGTGGAGCAGAACACACTGATGGTGGAAGAGCGGGAACGAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464640.5
CDS CCA 72 bp TCGTCCAGCTCTTGCTCGGCTAACAGCTGCCGGTTTTaGATGGAATTATTCCGCAACAACAAGAAAGCGTCG +
Preference number: 6 (lower is better)
Translates to: SSSSCSANSCRF*MELFRNNKKAS
Trigger: CGACGCTTTCTTGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCAAGAGCTGGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000464640.5
ENST00000467096.5
CDS TCA 72 bp GTTTTGTCACACCAATCGCTGCTTCTGGATCTAAGCTaGTGCCTGACACCAGTGCCATACGGTCATCAGCAA +
Preference number: 6 (lower is better)
Translates to: VLSHQSLLLDLS*CLTPVPYGHQQ
Trigger: TTGCTGATGACCGTATGGCACTGGTGTCAGGCATCAGCTTAGATCCAGAAGCAGCGATTGGTGTGACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000312283.12
ENST00000355957.9
ENST00000358029.8
ENST00000359617.8
ENST00000361830.7
ENST00000371132.8
ENST00000371141.8
ENST00000412911.5
ENST00000458280.5
ENST00000460655.5
ENST00000464640.5
ENST00000467096.5
ENST00000468590.1
ENST00000476384.5
ENST00000483434.5
ENST00000493301.5
ENST00000496003.5
ENST00000496117.5
CDS CCA 72 bp CCACTTATATTCCTGATTTATTCACTTTCTTTCTCGTaGCCCGGCTGGCCCACCCTTTCACGGAAGCTTCTC +
Preference number: 6 (lower is better)
Translates to: PLIFLIYSLSFS*PGWPTLSRKLL
Trigger: GAGAAGCTTCCGTGAAAGGGTGGGCCAGCCGGGCCACGAGAAAGAAAGTGAATAAATCAGGAATATAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355957.9
ENST00000358029.8
ENST00000371132.8
ENST00000371141.8
ENST00000467096.5
ENST00000496003.5
CDS CCA 72 bp CCAGCTCTTGCTCGGCTAACAGCTGCCGGTTTTGGATaGAATTATTCCGCAACAACAAGAAAGCGTCGGTTA +
Preference number: 6 (lower is better)
Translates to: PALARLTAAGFG*NYSATTRKRRL
Trigger: TAACCGACGCTTTCTTGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCAAGAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355957.9
ENST00000464640.5
ENST00000467096.5
CDS CCA 72 bp CAGCAAGTTGCTCGGCTAACAGCTGCCGGTTTTGGATaGAATTATTCCGCAACAACAAGAAAGCGTCGGTTA +
Preference number: 6 (lower is better)
Translates to: QQVARLTAAGFG*NYSATTRKRRL
Trigger: TAACCGACGCTTTCTTGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCAACTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371132.8
CDS CCA 72 bp TCATCAGCAAGTTGCTCGGCTAACAGCTGCCGGTTTTaGATGGAATTATTCCGCAACAACAAGAAAGCGTCG +
Preference number: 6 (lower is better)
Translates to: SSASCSANSCRF*MELFRNNKKAS
Trigger: CGACGCTTTCTTGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCAACTTGCTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371132.8
CDS CCA 72 bp TACTCACTTGCTCGGCTAACAGCTGCCGGTTTTGGATaGAATTATTCCGCAACAACAAGAAAGCGTCGGTTA +
Preference number: 6 (lower is better)
Translates to: YSLARLTAAGFG*NYSATTRKRRL
Trigger: TAACCGACGCTTTCTTGTTGTTGCGGAATAATTCCATCCAAAACCGGCAGCTGTTAGCCGAGCAAGTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358029.8
ENST00000371141.8
ENST00000496003.5
CDS CAA 72 bp ATACGGTCATCAGCAAGCTGTATTATAAACTTGCTTTaGATAACTGCTAGGATTTGGATTGTTTTCCTATCT +
Preference number: 6 (lower is better)
Translates to: IRSSASCIINLL*ITARIWIVFLS
Trigger: AGATAGGAAAACAATCCAAATCCTAGCAGTTATCAAAAGCAAGTTTATAATACAGCTTGCTGATGACCGTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476384.5