Pregenerated sensors for STUB1 (Homo sapiens)
Ensembl gene IDs: ENSG00000103266Ensembl transcript IDs: ENST00000219548.9, ENST00000563505.5, ENST00000564370.5, ENST00000565677.5, ENST00000565813.1, ENST00000566181.2, ENST00000567173.5, ENST00000567790.1, ENST00000569248.5
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACCAGCAAAAGCGATGCTaGGAGGGGAAACAGTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GLPVTHQHVPPRAHGFYYQQKRC*EGKQSR Trigger: TCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTG...GTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| 3UTR-3UTR TCA 90 bp | GGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTCCACCCTCACCTCAGCAAAAGCGATGCTaGGAGGGGAAACAGTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GGMLRSTLTPASSSPPSPQQKRC*EGKQSR Trigger: TCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTG...AGGTGAGGGTGGAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565813.1 |
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| CDS-3UTR GCA 90 bp | GCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAGCCAGCGCCCAGCCGTaGGCCGCCCTCCTTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: AGHTPARPTSCSRILLHRASAQP*AALLLL Trigger: GAGGAGAAGGAGGGCGGCGCACGGCTGGGCGCTGGC...TCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR CCA 90 bp | GCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGACCTCCTTGCCCTTCATaGCGCCGCGCGGCACGGCCT | + |
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Preference number: 4 (lower is better) Translates to: AGHTPARPTSCSRILLHRPPCPS*RRAARP Trigger: AGGCCGTGCCGCGCGGCGCCATGAAGGGCAAGGAGG...TCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR TCA 90 bp | GCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAGATTGCCCTGCTCCTTaGGCTCCTGCGCGCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: AGHTPARPTSCSRILLHRDCPAP*APARSG Trigger: GCCCGAGCGCGCAGGAGCTCAAGGAGCAGGGCAATC...TCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR GCA 90 bp | GGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACTGCGCCTTCACAGACTaGCCGTCCAGCTCCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: GLPVTHQHVPPRAHGFYYCAFTD*PSSSRA Trigger: CGCCCTGGAGCTGGACGGGCAGTCTGTGAAGGCGCA...GTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR GCA 90 bp | GGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACTGCTCCTTGAGCTCCTaGGCGCTCGGGCTCTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: GLPVTHQHVPPRAHGFYYCSLSS*ALGLFS Trigger: CGAGAAGAGCCCGAGCGCGCAGGAGCTCAAGGAGCA...GTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR CCA 90 bp | GCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAGGGATGAGCTGTTCCTaGGTCAGGGGGCTCCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: AGHTPARPTSCSRILLHRGMSCS*VRGLRV Trigger: GACCCGGAGCCCCCTGACCCAGGAACAGCTCATCCC...TCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR GCA 90 bp | GCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGACAGTCGGCCAGGGCCTaGTCGTGCTGCTGCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: AGHTPARPTSCSRILLHRQSARA*SCCCIF Trigger: GAAGATGCAGCAGCACGAGCAGGCCCTGGCCGACTG...TCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR GCA 90 bp | GGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACTGCCCCAGGAAGAAGTaGGCCTTCACAGACTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: GLPVTHQHVPPRAHGFYYCPRKK*AFTDCP Trigger: CGGGCAGTCTGTGAAGGCGCACTTCTTCCTGGGGCA...GTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR GCA 90 bp | GGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACAACAGCTGGCAGGACTaGCGGTCACACACCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: GLPVTHQHVPPRAHGFYYNSWQD*RSHTST Trigger: CGTGCTGGTGTGTGACCGGCAGTCCTGCCAGCTGTT...GTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR CCA 90 bp | ACTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATACTTCCCCGACCGCTaGTGGCATGCTACGCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: TSPTAGGMLRSTLTPASSYFPDR*WHATLN Trigger: GTTGAGCGTAGCATGCCACCAGCGGTCGGGGAAGTA...TGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGTCGGGGAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565813.1 |
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| CDS-3UTR GCA 90 bp | AGGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTAATCTCCAGCTGGCACTaGCCCAGGAAGAAGTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: RTAGHTPARPTSCSRILLISSWH*PRKKCA Trigger: GGCGCACTTCTTCCTGGGGCAGTGCCAGCTGGAGAT...TAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR CCA 90 bp | AGGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACCCTCGTGGTTTCGCTaGCACTCTTCCAGCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: RTAGHTPARPTSCSRILLPSWFR*HSSSSL Trigger: GAGGGAGCTGGAAGAGTGCCAGCGAAACCACGAGGG...TAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR CCA 90 bp | GGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTCCACCCTCACCTTTCCCCGACCGCTGGTaGCATGCTACGCTCAACCTT | + |
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Preference number: 4 (lower is better) Translates to: GGMLRSTLTPASSSPPSPFPDRW*HATLNL Trigger: AAGGTTGAGCGTAGCATGCCACCAGCGGTCGGGGAA...AGGTGAGGGTGGAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565813.1 |
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| CDS-3UTR TCA 90 bp | TACTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCCAGCAAAAGCGATGCTaGGAGGGGAAACAGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: YFPDRWWHATLNLDTSVFQQKRC*EGKQSR Trigger: TCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTG...GAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGTCGGGGAAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000565813.1 |
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| CDS-3UTR TCA 90 bp | CCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATCTCCATGCTACGCTCAACCTTaGCACCAGCGTCTTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: PTAGGMLRSTLTPASSSPCYAQP*HQRLHL Trigger: GAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCA...TGGAGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGTCGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565813.1 |
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| CDS-3UTR GCA 90 bp | AGGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTAAACAGACGATTGCCCTaGTCCTTGAGCTCCTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RTAGHTPARPTSCSRILLNRRLP*SLSSCA Trigger: CGCGCAGGAGCTCAAGGAGCAGGGCAATCGTCTGTT...TAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR CCA 90 bp | GCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGACTCTCCATCTCCAGCTaGCACTGCCCCAGGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: AGHTPARPTSCSRILLHRLSISS*HCPRKK Trigger: CTTCTTCCTGGGGCAGTGCCAGCTGGAGATGGAGAG...TCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR CCA 90 bp | AGGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTAGCTAGCCAAAACAGCTaGCAGGACTGCCGGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: RTAGHTPARPTSCSRILLASQNS*QDCRSH Trigger: GTGTGACCGGCAGTCCTGCCAGCTGTTTTGGCTAGC...TAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR GCA 90 bp | GCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGATGCGCCGCTCCTCAATaGTGTTCCAGCGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGHTPARPTSCSRILLHRCAAPQ*CSSASS Trigger: AGAAGAAGCGCTGGAACAGCATTGAGGAGCGGCGCA...TCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR GCA 90 bp | AGGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTAGCCATGTACTTGTCGTaGTTGGCCTCAATGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTAGHTPARPTSCSRILLAMYLS*LASMQA Trigger: GGCCTGCATTGAGGCCAAGCACGACAAGTACATGGC...TAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR CCA 90 bp | GCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAAGCACAAGGCCCGGTTaGTGTAATACACGGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: AGHTPARPTSCSRILLHRSTRPG*CNTRPP Trigger: TGGTGGCCGTGTATTACACCAACCGGGCCTTGTGCT...TCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR TCA 90 bp | GCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGACAGCAAAAGCGATGCTaGGAGGGGAAACAGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGHTPARPTSCSRILLHRQQKRC*EGKQSR Trigger: TCTGGACTGTTTCCCCTCTCAGCATCGCTTTTGCTG...TCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR CCA 90 bp | AGGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTAGCTGCAGATTGGCGATaGCCTCATCATAGCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RTAGHTPARPTSCSRILLAADWR*PHHSSP Trigger: TGGAGAGCTATGATGAGGCCATCGCCAATCTGCAGC...TAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR CCA 90 bp | AGGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTAAAGCTCGCTGCAGATTaGCGATGGCCTCATCATAGC | + |
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Preference number: 4 (lower is better) Translates to: RTAGHTPARPTSCSRILLKLAAD*RWPHHS Trigger: GCTATGATGAGGCCATCGCCAATCTGCAGCGAGCTT...TAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR GCA 90 bp | GCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAGCACGTCCCACCTCGTaGTCACGGATTTTATTACAC | + |
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Preference number: 4 (lower is better) Translates to: AGHTPARPTSCSRILLHRARPTS*SRILLH Trigger: GTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGC...TCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS TCA 90 bp | AGGCCGGGCCAGCCGCATGAGGGCGTAGGCTCAGCGTGCCCACTCTaGCCCACGGCCCGTCCCAGCTTCTGCGCTCTGGGATCGCGCGGC | + |
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Preference number: 5 (lower is better) Translates to: RPGQPHEGVGSACPL*PTARPSFCALGSRG Trigger: GCCGCGCGATCCCAGAGCGCAGAAGCTGGGACGGGCCGTGGGTCAGAGTGGGCACGCTGAGCCTACGCCCTCATGCGGCTGGCCCGGCCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565677.5 |
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| CDS TCA 90 bp | CACCAGCGGGTTCCGGGTCTAGGGACCAAGGCCGGGCCAGCCGCATaGGGGCGTAGGCTCAGCGTGCCCACTCTGACCCACGGCCCGTCC | + |
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Preference number: 5 (lower is better) Translates to: HQRVPGLGTKAGPAA*GRRLSVPTLTHGPS Trigger: GGACGGGCCGTGGGTCAGAGTGGGCACGCTGAGCCTACGCCCTCATGCGGCTGGCCCGGCCTTGGTCCCTAGACCCGGAACCCGCTGGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000564370.5 ENST00000565677.5 ENST00000569248.5 |
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| CDS CCA 90 bp | CACCCTCGTTCTCCGGCACCCGGCGCTGGGCTCGAGAACCACGGCTaGGCTTTGGGAGCCGAGGACACGCCCCGAAGAGGAGCCAGACCC | + |
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Preference number: 5 (lower is better) Translates to: HPRSPAPGAGLENHG*ALGAEDTPRRGARP Trigger: GGGTCTGGCTCCTCTTCGGGGCGTGTCCTCGGCTCCCAAAGCCCAGCCGTGGTTCTCGAGCCCAGCGCCGGGTGCCGGAGAACGAGGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569248.5 |
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| CDS CCA 90 bp | CGGCCTCCATCCAGCATCGCACCCTCGTTCTCCGGCACCCGGCGCTaGGCTCGAGAACCACGGCTGGGCTTTGGGAGCCGAGGACACGCC | + |
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Preference number: 5 (lower is better) Translates to: RPPSSIAPSFSGTRR*AREPRLGFGSRGHA Trigger: GGCGTGTCCTCGGCTCCCAAAGCCCAGCCGTGGTTCTCGAGCCCAGCGCCGGGTGCCGGAGAACGAGGGTGCGATGCTGGATGGAGGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569248.5 |
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| CDS GCA 90 bp | ATCTCCAGCTGGCACTGCCCCAGGAAGAAGTGCGCCTTCACAGACTaGCCGTCCAGCTCCAGGGCGCGCCGGCAGTCGGCCAGGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: ISSWHCPRKKCAFTD*PSSSRARRQSARAC Trigger: GCAGGCCCTGGCCGACTGCCGGCGCGCCCTGGAGCTGGACGGGCAGTCTGTGAAGGCGCACTTCTTCCTGGGGCAGTGCCAGCTGGAGAT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000219548.9 ENST00000563505.5 ENST00000564370.5 ENST00000565677.5 ENST00000567173.5 ENST00000567790.1 ENST00000569248.5 |
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| CDS GCA 90 bp | GCCGCCGCCTCCGGGTACTTTCGGCCCACGAACAGACGATTGCCCTaGTCCTTGAGCTCCTGCGCGCTCGGGCTCTTCTCGGGGCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: AAASGYFRPTNRRLP*SLSSCALGLFSGLP Trigger: CGGAAGCCCCGAGAAGAGCCCGAGCGCGCAGGAGCTCAAGGAGCAGGGCAATCGTCTGTTCGTGGGCCGAAAGTACCCGGAGGCGGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000219548.9 ENST00000563505.5 ENST00000565677.5 ENST00000567173.5 ENST00000567790.1 ENST00000569248.5 |
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| CDS TCA 90 bp | CCTCCGGGTACTTTCGGCCCACGAACAGACGATTGCCCTGCTCCTTaGGCTCCTGCGCGCTCGGGCTCTTCTCGGGGCTTCCGCCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: PPGTFGPRTDDCPAP*APARSGSSRGFRRQ Trigger: CTGGCGGCGGAAGCCCCGAGAAGAGCCCGAGCGCGCAGGAGCTCAAGGAGCAGGGCAATCGTCTGTTCGTGGGCCGAAAGTACCCGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000219548.9 ENST00000563505.5 ENST00000565677.5 ENST00000567173.5 ENST00000567790.1 ENST00000569248.5 |
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| CDS TCA 90 bp | AGGCCGGGCCAGCCGCATGAGGGCGTAGGCTCAGCGTGCCCACTCTaGCCCACGGCCCGTCCCAGCTTCTGCGCTCTGGCTAGAATCAAG | + |
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Preference number: 5 (lower is better) Translates to: RPGQPHEGVGSACPL*PTARPSFCALARIK Trigger: CTTGATTCTAGCCAGAGCGCAGAAGCTGGGACGGGCCGTGGGTCAGAGTGGGCACGCTGAGCCTACGCCCTCATGCGGCTGGCCCGGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564370.5 ENST00000569248.5 |
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| CDS GCA 90 bp | TACTTTCGGCCCACGAACAGACGATTGCCCTGCTCCTTGAGCTCCTaGGCGCTCGGGCTCTTCTCGGGGCTTCCGCCGCCAGCGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: YFRPTNRRLPCSLSS*ALGLFSGLPPPAPS Trigger: GCTGGGCGCTGGCGGCGGAAGCCCCGAGAAGAGCCCGAGCGCGCAGGAGCTCAAGGAGCAGGGCAATCGTCTGTTCGTGGGCCGAAAGTA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000219548.9 ENST00000563505.5 ENST00000565677.5 ENST00000567173.5 ENST00000567790.1 ENST00000569248.5 |
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| CDS CCA 90 bp | GAGGCCCCACAACCGGGCAGCTTGTCAGCCAACCTCGCTGCAGATTaGCGATGGCCTCATCATAGCTCTCCATCTCCAGCTGGCACTGCC | + |
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Preference number: 5 (lower is better) Translates to: EAPQPGSLSANLAAD*RWPHHSSPSPAGTA Trigger: GGCAGTGCCAGCTGGAGATGGAGAGCTATGATGAGGCCATCGCCAATCTGCAGCGAGGTTGGCTGACAAGCTGCCCGGTTGTGGGGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567790.1 |
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| CDS-3UTR CAA 90 bp | GGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACCGATTGCCCTGCTCCTaGAGCTCCTGCGCGCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: GLPVTHQHVPPRAHGFYYRLPCS*SSCALG Trigger: CCCGAGCGCGCAGGAGCTCAAGGAGCAGGGCAATCG...GTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS CCA 90 bp | CCACAACCGGGCAGCTTGTCAGCCAACCTCGCTGCAGATTGGCGATaGCCTCATCATAGCTCTCCATCTCCAGCTGGCACTGCCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: PQPGSLSANLAADWR*PHHSSPSPAGTAPG Trigger: TCCTGGGGCAGTGCCAGCTGGAGATGGAGAGCTATGATGAGGCCATCGCCAATCTGCAGCGAGGTTGGCTGACAAGCTGCCCGGTTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567790.1 |
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| CDS-3UTR CAA 90 bp | GCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGACCCACGAACAGACGATaGCCCTGCTCCTTGAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: AGHTPARPTSCSRILLHRPTNRR*PCSLSS Trigger: GGAGCTCAAGGAGCAGGGCAATCGTCTGTTCGTGGG...TCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR CAA 90 bp | GCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACACAGAATGTACTTGTCGTGCTaGGCCTCAATGCAGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: AGHTPARPTSCSRILLHRMYLSC*ASMQAC Trigger: GCAGGCCTGCATTGAGGCCAAGCACGACAAGTACAT...TCTGTGTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR CAA 90 bp | GGACTGCCGGTCACACACCAGCACGTCCCACCTCGTGCTCACGGATTTTATTACTCCTTCATAGCCAAGTaGGGGATGAGCTGTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: GLPVTHQHVPPRAHGFYYSFIAK*GMSCSW Trigger: CCAGGAACAGCTCATCCCCAACTTGGCTATGAAGGA...GTAATAAAATCCGTGAGCACGAGGTGGGACGTGCTGGTGTGTGACCGGCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000219548.9 |
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| CDS-3UTR CAA 90 bp | TACTTCCCCGACCGCTGGTGGCATGCTACGCTCAACCTTGACACCAGCGTCTTCATGCTACGCTCAACCTaGACACCAGCGTCTTCATCT | + |
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Preference number: 5 (lower is better) Translates to: YFPDRWWHATLNLDTSVFMLRST*TPASSS Trigger: AGATGAAGACGCTGGTGTCAAGGTTGAGCGTAGCAT...GAAGACGCTGGTGTCAAGGTTGAGCGTAGCATGCCACCAGCGGTCGGGGAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565813.1 |
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| CDS CCA 72 bp | GCCGCGCGTGCGCCCAACCAGCCTGGACGGGGACACTaGGCCCGCGACGTCGGGGGCTGGGAGGAACGCTCC | + |
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Preference number: 6 (lower is better) Translates to: AARAPNQPGRGH*ARDVGGWEERS Trigger: GGAGCGTTCCTCCCAGCCCCCGACGTCGCGGGCCCAGTGTCCCCGTCCAGGCTGGTTGGGCGCACGCGCGGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565677.5 |
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| CDS GCA 72 bp | CAGCGCCCAGCCGTGCGCCGCCCTCCTTCTCCTCCTTaGCCTTCATGGCGCCGCGCGGCACGGCCTGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: QRPAVRRPPSPP*PSWRRAARPGL Trigger: GAGCCCAGGCCGTGCCGCGCGGCGCCATGAAGGGCAAGGAGGAGAAGGAGGGCGGCGCACGGCTGGGCGCTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000219548.9 ENST00000563505.5 ENST00000565677.5 ENST00000567173.5 ENST00000567790.1 ENST00000569248.5 |
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| CDS CAA 90 bp | CGTTCTCCGGCACCCGGCGCTGGGCTCGAGAACCACGGCTGGGCTTaGGGAGCCGAGGACACGCCCCGAAGAGGAGCCAGACCCTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: RSPAPGAGLENHGWA*GAEDTPRRGARPSV Trigger: CACCGAGGGTCTGGCTCCTCTTCGGGGCGTGTCCTCGGCTCCCAAAGCCCAGCCGTGGTTCTCGAGCCCAGCGCCGGGTGCCGGAGAACG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569248.5 |
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| CDS GCA 72 bp | TGGCACTGCCCCAGGAAGAAGTGCGCCTTCACAGACTaGCCGTCCAGCTCCAGGGCGCGCCGGCAGTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: WHCPRKKCAFTD*PSSSRARRQSA Trigger: GGCCGACTGCCGGCGCGCCCTGGAGCTGGACGGGCAGTCTGTGAAGGCGCACTTCTTCCTGGGGCAGTGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000219548.9 ENST00000563505.5 ENST00000564370.5 ENST00000565677.5 ENST00000566181.2 ENST00000567173.5 ENST00000567790.1 ENST00000569248.5 |
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| CDS CCA 72 bp | TCTCCGGCACCCGGCGCTGGGCTCGAGAACCACGGCTaGGCTTTGGGAGCCGAGGACACGCCCCGAAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SPAPGAGLENHG*ALGAEDTPRRG Trigger: TCCTCTTCGGGGCGTGTCCTCGGCTCCCAAAGCCCAGCCGTGGTTCTCGAGCCCAGCGCCGGGTGCCGGAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569248.5 |
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| CDS TCA 72 bp | CAGCCGCATGAGGGCGTAGGCTCAGCGTGCCCACTCTaGCCCACGGCCCGTCCCAGCTTCTGCGCTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: QPHEGVGSACPL*PTARPSFCALA Trigger: AGCCAGAGCGCAGAAGCTGGGACGGGCCGTGGGTCAGAGTGGGCACGCTGAGCCTACGCCCTCATGCGGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000564370.5 ENST00000569248.5 |
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| CDS TCA 72 bp | CAGCCGCATGAGGGCGTAGGCTCAGCGTGCCCACTCTaGCCCACGGCCCGTCCCAGCTTCTGCGCTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: QPHEGVGSACPL*PTARPSFCALG Trigger: TCCCAGAGCGCAGAAGCTGGGACGGGCCGTGGGTCAGAGTGGGCACGCTGAGCCTACGCCCTCATGCGGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565677.5 |
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| CDS CCA 72 bp | TCCAGCATCGCACCCTCGTTCTCCGGCACCCGGCGCTaGGCTCGAGAACCACGGCTGGGCTTTGGGAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: SSIAPSFSGTRR*AREPRLGFGSR Trigger: TCGGCTCCCAAAGCCCAGCCGTGGTTCTCGAGCCCAGCGCCGGGTGCCGGAGAACGAGGGTGCGATGCTGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569248.5 |
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| CDS CAA 90 bp | GCCTCCGGGTACTTTCGGCCCACGAACAGACGATTGCCCTGCTCCTaGAGCTCCTGCGCGCTCGGGCTCTTCTCGGGGCTTCCGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: ASGYFRPTNRRLPCS*SSCALGLFSGLPPP Trigger: TGGCGGCGGAAGCCCCGAGAAGAGCCCGAGCGCGCAGGAGCTCAAGGAGCAGGGCAATCGTCTGTTCGTGGGCCGAAAGTACCCGGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000219548.9 ENST00000563505.5 ENST00000565677.5 ENST00000567173.5 ENST00000567790.1 ENST00000569248.5 |
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| CDS GCA 72 bp | CCCACGAACAGACGATTGCCCTGCTCCTTGAGCTCCTaGGCGCTCGGGCTCTTCTCGGGGCTTCCGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: PTNRRLPCSLSS*ALGLFSGLPPP Trigger: TGGCGGCGGAAGCCCCGAGAAGAGCCCGAGCGCGCAGGAGCTCAAGGAGCAGGGCAATCGTCTGTTCGTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000219548.9 ENST00000563505.5 ENST00000565677.5 ENST00000567173.5 ENST00000567790.1 ENST00000569248.5 |
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| CDS CAA 72 bp | GCCGCCTCCGGGTACTTTCGGCCCACGAACAGACGATaGCCCTGCTCCTTGAGCTCCTGCGCGCTCGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: AASGYFRPTNRR*PCSLSSCALGL Trigger: GAGCCCGAGCGCGCAGGAGCTCAAGGAGCAGGGCAATCGTCTGTTCGTGGGCCGAAAGTACCCGGAGGCGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000219548.9 ENST00000563505.5 ENST00000565677.5 ENST00000567173.5 ENST00000567790.1 ENST00000569248.5 |
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| CDS GCA 72 bp | CTCTCCATCTCCAGCTGGCACTGCCCCAGGAAGAAGTaGGCCTTCACAGACTGCCCGTCCAGCTCCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LSISSWHCPRKK*AFTDCPSSSRA Trigger: CGCCCTGGAGCTGGACGGGCAGTCTGTGAAGGCGCACTTCTTCCTGGGGCAGTGCCAGCTGGAGATGGAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000219548.9 ENST00000563505.5 ENST00000564370.5 ENST00000565677.5 ENST00000566181.2 ENST00000567173.5 ENST00000567790.1 ENST00000569248.5 |
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| CDS TCA 72 bp | ACTTTCGGCCCACGAACAGACGATTGCCCTGCTCCTTaGGCTCCTGCGCGCTCGGGCTCTTCTCGGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: TFGPRTDDCPAP*APARSGSSRGF Trigger: GAAGCCCCGAGAAGAGCCCGAGCGCGCAGGAGCTCAAGGAGCAGGGCAATCGTCTGTTCGTGGGCCGAAAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000219548.9 ENST00000563505.5 ENST00000565677.5 ENST00000567173.5 ENST00000567790.1 ENST00000569248.5 |
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| CDS CCA 72 bp | GTTTTCCAAATCTTTGGAGAGTCCGGGCTTAGGACCTaGGGTCCTCAAGGGTCGAGGGCCCCTGCCCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VFQIFGESGLRT*GPQGSRAPALP Trigger: GGGGAGGGCAGGGGCCCTCGACCCTTGAGGACCCCAGGTCCTAAGCCCGGACTCTCCAAAGATTTGGAAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569248.5 |
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| CDS CAA 72 bp | TACTTTCGGCCCACGAACAGACGATTGCCCTGCTCCTaGAGCTCCTGCGCGCTCGGGCTCTTCTCGGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: YFRPTNRRLPCS*SSCALGLFSGL Trigger: AAGCCCCGAGAAGAGCCCGAGCGCGCAGGAGCTCAAGGAGCAGGGCAATCGTCTGTTCGTGGGCCGAAAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000219548.9 ENST00000563505.5 ENST00000565677.5 ENST00000567173.5 ENST00000567790.1 ENST00000569248.5 |
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| CDS CCA 72 bp | CGTGCTGCTGCATCTTCAGGTAGCACAAGGCCCGGTTaGTGTAATACACGGCCACCAGCGGGTTCCGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: RAAASSGSTRPG*CNTRPPAGSGS Trigger: AGACCCGGAACCCGCTGGTGGCCGTGTATTACACCAACCGGGCCTTGTGCTACCTGAAGATGCAGCAGCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000564370.5 ENST00000565677.5 ENST00000569248.5 |
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| CDS CCA 72 bp | CAACCGGGCAGCTTGTCAGCCAACCTCGCTGCAGATTaGCGATGGCCTCATCATAGCTCTCCATCTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: QPGSLSANLAAD*RWPHHSSPSPA Trigger: AGCTGGAGATGGAGAGCTATGATGAGGCCATCGCCAATCTGCAGCGAGGTTGGCTGACAAGCTGCCCGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567790.1 |
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| CDS TCA 72 bp | CTGGGTCCAAGGATCTGTGCACAGTGGAGTACTGGCTaGGCCTATCCGCTTGATTCCACTTGGTTTTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: LGPRICAQWSTG*AYPLDSTWFCK Trigger: TTTACAAAACCAAGTGGAATCAAGCGGATAGGCTCAGCCAGTACTCCACTGTGCACAGATCCTTGGACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569248.5 |
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| CDS CCA 72 bp | AATCAAGAAACTAGGTTTCTCAGTTGTCAAAGCCCCTaGGTCCAAGGATCTGTGCACAGTGGAGTACTGGCT | + |
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Preference number: 6 (lower is better) Translates to: NQETRFLSCQSP*VQGSVHSGVLA Trigger: AGCCAGTACTCCACTGTGCACAGATCCTTGGACCCAGGGGCTTTGACAACTGAGAAACCTAGTTTCTTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569248.5 |
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